isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
ENSMUSG00000000001.5_108014718_108053462_1	chr3	-	3140	9	FSM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	0	122	0	-122	multi-exon	FALSE	canonical	3	376	junction_4	42.0652395095998	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAGATAATCCAAATTTA	NA	False	NA	-19	True	NA	NA	NA	108053462	108014717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
ENSMUSG00000000028.16_18599203_18630344_1	chr16	-	1848	19	NNC	ENSMUSG00000000028.16	novel	2143	20	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	123.104655366235	2267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630344	18599202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620595_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
ENSMUSG00000000028.16_18599203_18630344_2	chr16	-	1850	19	NNC	ENSMUSG00000000028.16	novel	2143	20	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	123.061524811327	2261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630344	18599202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_18599324_18600645_18600705_18603550_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
ENSMUSG00000000056.8_121128079_121144596_1	chr11	+	2309	11	FSM	ENSMUSG00000000056.8	ENSMUST00000103015.4	4395	11	0	2086	0	-2086	multi-exon	FALSE	canonical	3	80	junction_4	11.0295058819514	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTGGCCCACCTAGGCT	NA	False	NA	NA	False	AATAAA	-16	NA	121128078	121144596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_121128178_121129244_121129344_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
ENSMUSG00000000056.8_121128079_121145390_1	chr11	+	3103	11	FSM	ENSMUSG00000000056.8	ENSMUST00000103015.4	4395	11	0	1292	0	-1292	multi-exon	FALSE	canonical	3	80	junction_4	11.0295058819514	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGCATTGAAGGAGTCA	NA	False	NA	NA	False	AATAAA	-20	NA	121128078	121145390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_121128178_121129244_121129344_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
ENSMUSG00000000125.6_103703060_103707221_1	chr11	+	854	2	ISM	ENSMUSG00000000125.6	ENSMUST00000000127.6	3076	5	38084	1562	38084	-1562	3prime_fragment	FALSE	canonical	2	4	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCGCAACAGAACAGGC	5314	False	NA	NA	False	NA	NA	NA	103703059	103707221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_103703595_103706902
ENSMUSG00000000127.16_64203017_64446192_1	chr17	+	2707	18	FSM	ENSMUSG00000000127.16	ENSMUST00000000129.14	2973	18	0	266	0	0	multi-exon	FALSE	canonical	3	115	junction_9	21.9155346145023	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTATTAGCTAACCACAG	NA	False	NA	4	True	AATAAA	-15	NA	64203016	64446192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ENSMUSG00000000134.18_7628799_7641441_1	chrX	+	2945	10	NIC	ENSMUSG00000000134.18	novel	6328	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	90.0647229551485	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTCCCGTTCTTGTT	NA	False	NA	25	True	AATAAA	-36	NA	7628798	7641441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_7628870_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUSG00000000168.11_50547080_50570828_1	chr9	-	2636	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	252	1147	252	748	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTTGTAGAAGTGGAGCT	NA	False	NA	0	True	AATAAA	-23	NA	50570828	50547079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUSG00000000168.11_50547080_50570828_2	chr9	-	2633	14	NNC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	252	748	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	343.843847866988	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTTGTAGAAGTGGAGCT	NA	False	NA	0	True	AATAAA	-23	NA	50570828	50547079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561067_50562046_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUSG00000000168.11_50547207_50570828_1	chr9	-	2509	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	252	1274	252	621	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAAGATATAAGCCCGCT	NA	False	NA	NA	False	AATAAA	-16	NA	50570828	50547206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUSG00000000168.11_50547652_50570828_1	chr9	-	2064	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	252	1719	252	176	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCACTAGTTAATTTTAT	NA	False	NA	-5	True	ATTAAA	-18	NA	50570828	50547651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUSG00000000171.6_50507657_50515116_1	chr9	-	1228	4	NNC	ENSMUSG00000000171.6	novel	1231	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	646.50186903571	5586	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTATATAATGAAAATACAT	NA	False	NA	NA	False	AATAAA	-3	NA	50515116	50507656	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_50508551_50510067_50510206_50511847_50511965_50515037
ENSMUSG00000000194.14_31042345_31104610_1	chr2	+	1940	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	17	4177	0	32	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGCTAATTGGGAG	NA	False	NA	7	True	AGTAAA	-15	NA	31042344	31104610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ENSMUSG00000000194.14_31042345_31106561_1	chr2	+	3891	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	17	2226	0	1983	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAGTGTTCAACTCTGA	NA	False	NA	19	True	AATAAA	-32	NA	31042344	31106561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ENSMUSG00000000275.17_88890202_88908635_1	chr11	+	3096	8	NNC	ENSMUSG00000000275.17	novel	5566	8	NA	NA	0	-2484	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	189.00091782522	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCATGGAGACTGGCTGT	NA	False	NA	NA	False	NA	NA	NA	88890201	88908635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904379_88906358_88906458_88906544_88906644_88907020
ENSMUSG00000000275.17_88908355_88911120_1	chr11	+	2720	2	NNC	ENSMUSG00000000275.17	novel	5566	8	NA	NA	18153	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTGTCCTGCCTTTTGC	2423	False	NA	25	True	NA	NA	NA	88908354	88911120	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_88910662_88910707
ENSMUSG00000000278.11_88814846_88846291_1	chr11	-	2092	13	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_3	719.324466079112	5059	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCTGAAAATTCTGTT	5201	False	NA	-9	True	AATAAA	-20	NA	88846291	88814845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_88815551_88819990_88820155_88821033_88821167_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ENSMUSG00000000278.11_88815087_88846291_1	chr11	-	1856	13	FSM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	0	241	0	-241	multi-exon	FALSE	canonical	3	2404	junction_3	148.297748540638	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGCAAAAGCAAACCA	5201	False	NA	NA	False	NA	NA	NA	88846291	88815086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ENSMUSG00000000278.11_88815306_88846291_1	chr11	-	1637	13	FSM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	0	460	0	-460	multi-exon	FALSE	canonical	3	2404	junction_3	148.297748540638	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATTTAAAACCAGACTCA	5201	False	NA	NA	False	NA	NA	NA	88846291	88815305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ENSMUSG00000000295.14_31179782_31204198_1	chr10	+	836	6	NNC	ENSMUSG00000000295.14	novel	631	3	NA	NA	-9597	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	200.207292574471	1670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGACTCTGTCTTCTGTTTT	NA	False	NA	18	True	ATTAAA	-25	NA	31179781	31204198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_31179863_31190510_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
ENSMUSG00000000296.9_31208372_31321800_1	chr10	-	1169	8	FSM	ENSMUSG00000000296.9	ENSMUST00000213528.2	969	8	51	-251	-7	0	multi-exon	FALSE	canonical	3	22	junction_3	226.139563192327	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGGATCTTTTATTTC	NA	False	NA	-3	True	ATTAAA	-17	NA	31321800	31208371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_31208966_31214180_31214242_31217135_31217175_31219007_31219023_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ENSMUSG00000000296.9_31208372_31321854_2	chr10	-	1208	7	FSM	ENSMUSG00000000296.9	ENSMUST00000000305.7	1308	7	100	0	-3	0	multi-exon	FALSE	canonical	3	31	junction_2	224.403654159196	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGGATCTTTTATTTC	NA	False	NA	-3	True	ATTAAA	-17	NA	31321854	31208371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_31208966_31214180_31214242_31217135_31217175_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ENSMUSG00000000296.9_31208372_31321854_3	chr10	-	1169	6	FSM	ENSMUSG00000000296.9	ENSMUST00000213639.2	827	6	-61	-281	-3	0	multi-exon	FALSE	canonical	3	30	junction_2	219.239230066154	1363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGGATCTTTTATTTC	NA	False	NA	-3	True	ATTAAA	-17	NA	31321854	31208371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_31208966_31214180_31214242_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ENSMUSG00000000296.9_31208372_31321854_4	chr10	-	1105	5	NNC	ENSMUSG00000000296.9	novel	1308	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	208.650874668668	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGGATCTTTTATTTC	NA	False	NA	-3	True	ATTAAA	-17	NA	31321854	31208371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_31208966_31222606_31222702_31233863_31234017_31255210_31255327_31321707
ENSMUSG00000000296.9_31208372_31321854_5	chr10	-	1147	6	FSM	ENSMUSG00000000296.9	ENSMUST00000215515.2	857	6	-39	-251	-3	0	multi-exon	FALSE	canonical	3	19	junction_1	227.386543137451	1483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGGATCTTTTATTTC	NA	False	NA	-3	True	ATTAAA	-17	NA	31321854	31208371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_31208966_31217135_31217175_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ENSMUSG00000000303.13_107330775_107396878_1	chr8	+	4382	15	ISM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	792	0	0	0	3prime_fragment	FALSE	canonical	3	808	junction_7	90.1298383172967	2111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5841	False	NA	26	True	ATTAAA	-18	NA	107330774	107396878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ENSMUSG00000000320.11_70132925_70146192_1	chr11	-	2372	14	FSM	ENSMUSG00000000320.11	ENSMUST00000000329.9	3001	14	-13	642	-13	-642	multi-exon	FALSE	canonical	3	19	junction_6	3.422860840198	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACATGTCACAGGGTCT	7389	False	NA	2	True	NA	NA	NA	70146192	70132924	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70133391_70133510_70133682_70133802_70133904_70136686_70136809_70137720_70137891_70138085_70138173_70140872_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
ENSMUSG00000000326.14_18225636_18245135_4	chr16	-	1547	6	NNC	ENSMUSG00000000326.14	novel	1397	6	NA	NA	219	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	90.2773504263389	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGAAATTCACTGAGTTA	4107	False	NA	NA	False	ATTAAA	-18	NA	18245135	18225635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_18226047_18226278_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18245105
ENSMUSG00000000326.14_18225636_18245135_6	chr16	-	1600	7	NNC	ENSMUSG00000000326.14	novel	1397	6	NA	NA	219	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	81.8299388298005	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGAAATTCACTGAGTTA	4107	False	NA	NA	False	ATTAAA	-18	NA	18245135	18225635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_18226043_18226278_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ENSMUSG00000000326.14_18225636_18245239_2	chr16	-	1704	7	NNC	ENSMUSG00000000326.14	novel	1397	6	NA	NA	115	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.8299388298005	276	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGAAATTCACTGAGTTA	4003	False	NA	NA	False	ATTAAA	-18	NA	18245239	18225635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_18226043_18226278_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ENSMUSG00000000326.14_18225636_18245239_3	chr16	-	1651	6	NNC	ENSMUSG00000000326.14	novel	1397	6	NA	NA	115	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	90.2773504263389	215	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGAAATTCACTGAGTTA	4003	False	NA	NA	False	ATTAAA	-18	NA	18245239	18225635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_18226047_18226278_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18245105
ENSMUSG00000000326.14_18225636_18245239_4	chr16	-	1704	7	NNC	ENSMUSG00000000326.14	novel	1397	6	NA	NA	115	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.8299388298005	492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGAAATTCACTGAGTTA	4003	False	NA	NA	False	ATTAAA	-18	NA	18245239	18225635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_18226059_18226294_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ENSMUSG00000000326.14_18225636_18245354_1	chr16	-	1759	6	NNC	ENSMUSG00000000326.14	novel	1397	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	90.2773504263389	209	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGAAATTCACTGAGTTA	3888	False	NA	NA	False	ATTAAA	-18	NA	18245354	18225635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_18226039_18226277_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18245105
ENSMUSG00000000326.14_18225636_18245354_2	chr16	-	1757	6	NNC	ENSMUSG00000000326.14	novel	1397	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	90.2773504263389	317	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGAAATTCACTGAGTTA	3888	False	NA	NA	False	ATTAAA	-18	NA	18245354	18225635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_18226054_18226294_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18245105
ENSMUSG00000000346.10_100513511_100518642_1	chr15	+	1358	3	NNC	ENSMUSG00000000346.10	novel	2135	4	NA	NA	281	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGCATTCTTTACTTAG	NA	False	NA	18	True	AATAAA	-25	NA	100513510	100518642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_100513606_100514793_100514913_100517498
ENSMUSG00000000346.10_100513511_100518642_2	chr15	+	1854	4	FSM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	281	0	281	0	multi-exon	FALSE	canonical	0	0	junction_1	569.007518013212	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGCATTCTTTACTTAG	NA	False	NA	18	True	AATAAA	-25	NA	100513510	100518642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248
ENSMUSG00000000346.10_100513511_100518642_3	chr15	+	1429	5	NNC	ENSMUSG00000000346.10	novel	2135	4	NA	NA	281	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	596.354078966515	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGCATTCTTTACTTAG	NA	False	NA	18	True	AATAAA	-25	NA	100513510	100518642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248_100517976_100518400
ENSMUSG00000000346.10_100513511_100518642_4	chr15	+	1420	4	NNC	ENSMUSG00000000346.10	novel	2135	4	NA	NA	281	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	635.924698547102	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGCATTCTTTACTTAG	NA	False	NA	18	True	AATAAA	-25	NA	100513510	100518642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_100513606_100514793_100514913_100515805_100515870_100517500
ENSMUSG00000000355.14_37689332_37702401_1	chrX	+	807	5	NNC	ENSMUSG00000000355.14	novel	783	6	NA	NA	-123	98	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	271.685479921177	648	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGACTCAATGTCCTAT	NA	False	NA	10	True	ATTAAA	-23	NA	37689331	37702401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_37689599_37691516_37691551_37694815_37694950_37700642_37700711_37702097
ENSMUSG00000000355.14_37689455_37702401_1	chrX	+	684	5	NNC	ENSMUSG00000000355.14	novel	783	6	NA	NA	0	98	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	271.685479921177	599	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGACTCAATGTCCTAT	NA	False	NA	10	True	ATTAAA	-23	NA	37689454	37702401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_37689599_37691516_37691551_37694815_37694950_37700642_37700711_37702097
ENSMUSG00000000355.14_37689532_37702303_2	chrX	+	842	7	NNC	ENSMUSG00000000355.14	novel	783	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	265.139847795251	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTAGTTTCAGAAAT	NA	False	NA	17	True	AATAAA	-19	NA	37689531	37702303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37697160_37697209_37700631_37700711_37702097
ENSMUSG00000000355.14_37689532_37702303_3	chrX	+	829	7	NNC	ENSMUSG00000000355.14	novel	783	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	277.22538965013	822	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTAGTTTCAGAAAT	NA	False	NA	17	True	AATAAA	-19	NA	37689531	37702303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_37689656_37690228_37690275_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
ENSMUSG00000000355.14_37689532_37702303_4	chrX	+	509	5	NNC	ENSMUSG00000000355.14	novel	783	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	271.685479921177	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTAGTTTCAGAAAT	NA	False	NA	17	True	AATAAA	-19	NA	37689531	37702303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_37689599_37691516_37691551_37694815_37694950_37700642_37700711_37702097
ENSMUSG00000000355.14_37689532_37702303_5	chrX	+	778	6	NNC	ENSMUSG00000000355.14	novel	783	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	234.104762873377	1255	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTAGTTTCAGAAAT	NA	False	NA	17	True	AATAAA	-19	NA	37689531	37702303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702102
ENSMUSG00000000355.14_37689532_37702303_6	chrX	+	532	4	NIC	ENSMUSG00000000355.14	novel	783	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	295.154573439448	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTAGTTTCAGAAAT	NA	False	NA	17	True	AATAAA	-19	NA	37689531	37702303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_37689656_37694815_37694950_37700642_37700711_37702097
ENSMUSG00000000355.14_37689532_37702401_1	chrX	+	597	4	NNC	ENSMUSG00000000355.14	novel	783	6	NA	NA	0	98	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	303.16698735552	379	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGACTCAATGTCCTAT	NA	False	NA	10	True	ATTAAA	-23	NA	37689531	37702401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_37689623_37694815_37694950_37700642_37700711_37702097
ENSMUSG00000000355.14_37689532_37702401_3	chrX	+	927	7	NNC	ENSMUSG00000000355.14	novel	783	6	NA	NA	0	98	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	277.22538965013	2063	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGACTCAATGTCCTAT	NA	False	NA	10	True	ATTAAA	-23	NA	37689531	37702401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_37689656_37690228_37690275_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
ENSMUSG00000000355.14_37689532_37702401_5	chrX	+	876	6	NNC	ENSMUSG00000000355.14	novel	783	6	NA	NA	0	98	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	234.104762873377	2331	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGACTCAATGTCCTAT	NA	False	NA	10	True	ATTAAA	-23	NA	37689531	37702401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702102
ENSMUSG00000000355.14_37689532_37702401_6	chrX	+	630	4	NIC	ENSMUSG00000000355.14	novel	783	6	NA	NA	0	98	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	295.154573439448	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGACTCAATGTCCTAT	NA	False	NA	10	True	ATTAAA	-23	NA	37689531	37702401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_37689656_37694815_37694950_37700642_37700711_37702097
ENSMUSG00000000365.10_56640154_56647931_1	chr14	+	488	3	NNC	ENSMUSG00000000365.10	novel	2077	14	NA	NA	0	-31439	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	273.5	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTGTGAACTCTGTCT	NA	False	NA	NA	False	AATACA	-40	NA	56640153	56647931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_56640282_56643033_56643129_56647666
ENSMUSG00000000365.10_56640154_56663245_1	chr14	+	616	5	ISM	ENSMUSG00000000365.10	ENSMUST00000225361.2	1609	11	-3	16125	0	-16125	5prime_fragment	FALSE	canonical	3	453	junction_4	41.3581914498204	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACCAGATCCAAAGTCTA	NA	False	NA	NA	False	AATAAA	-45	NA	56640153	56663245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056
ENSMUSG00000000365.10_56640154_56726892_1	chr14	+	3434	26	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	105.930165675316	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56640153	56726892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_56640210_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ENSMUSG00000000384.16_6565599_6576043_1	chr11	-	3114	12	FSM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	0	-824	0	0	multi-exon	FALSE	canonical	3	438	junction_8	40.423788103394	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGCCACTGGCTTTTC	NA	False	NA	-6	True	AATAAA	-18	NA	6576043	6565598	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ENSMUSG00000000384.16_6566425_6576043_1	chr11	-	2230	12	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	154.867151813236	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGCTATCTTCCCAGG	NA	False	NA	-29	True	AATAAA	-17	NA	6576043	6566424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6576022
ENSMUSG00000000384.16_6566425_6576043_2	chr11	-	2366	12	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_8	147.44311131545	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGCTATCTTCCCAGG	NA	False	NA	-29	True	AATAAA	-17	NA	6576043	6566424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ENSMUSG00000000399.11_126798959_126826088_1	chr6	-	1158	11	NNC	ENSMUSG00000000399.11	novel	1445	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	391.005063905827	5014	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAAGAGTCACTCTATT	NA	False	NA	-48	True	NA	NA	NA	126826088	126798958	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819095_126819176_126821270_126821369_126821753_126821925_126826026
ENSMUSG00000000409.15_129442137_129450333_1	chr4	-	1606	7	ISM	ENSMUSG00000000409.15	ENSMUST00000167288.8	2074	13	1832	0	-81	0	3prime_fragment	FALSE	canonical	3	108	junction_2	13.2214052035158	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACTGCATACTTTATTT	NA	False	NA	5	True	NA	NA	NA	129450333	129442136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080
ENSMUSG00000000439.10_115578863_115594944_2	chr6	+	1589	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	0	4641	0	4569	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTGCCATCTTTCTTT	NA	False	NA	9	True	AATGAA	-2	NA	115578862	115594944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ENSMUSG00000000439.10_115578863_115595647_1	chr6	+	2292	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	0	3938	0	-3938	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATTCCTGGCTTTCTT	NA	False	NA	NA	False	AATAAA	-33	NA	115578862	115595647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ENSMUSG00000000439.10_115578922_115595420_1	chr6	+	2006	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	59	4165	0	-4165	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTTTATAAGAAAACCT	NA	False	NA	NA	False	AAGAAA	-26	NA	115578921	115595420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ENSMUSG00000000441.18_115595558_115653453_1	chr6	-	2899	17	FSM	ENSMUSG00000000441.18	ENSMUST00000000451.14	3070	17	143	28	143	0	multi-exon	FALSE	canonical	3	610	junction_8	72.4119076878934	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTAATGGCTACTGACTC	8287	False	NA	-28	True	AATAAA	-15	NA	115653453	115595557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ENSMUSG00000000532.12_101071948_101109497_1	chr15	+	2350	9	FSM	ENSMUSG00000000532.12	ENSMUST00000000544.12	4418	9	0	2068	0	-2068	multi-exon	FALSE	canonical	3	11	junction_8	3.66571957465379	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCAGGGAGGTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	101071947	101109497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_101072117_101091812_101092053_101092689_101092939_101096664_101096896_101099858_101100027_101100818_101100976_101102333_101102459_101106960_101107092_101108617
ENSMUSG00000000544.15_165957909_165994079_1	chr1	+	2413	7	FSM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	102	0	0	0	multi-exon	FALSE	canonical	3	176	junction_6	19.1398362932741	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165957908	165994079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
ENSMUSG00000000544.15_165958036_165993534_1	chr1	+	1741	7	FSM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	229	545	0	-544	multi-exon	FALSE	canonical	3	176	junction_6	19.1398362932741	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAATCCTGTGACTGC	NA	False	NA	NA	False	NA	NA	NA	165958035	165993534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
ENSMUSG00000000544.15_165958036_165994079_1	chr1	+	2131	6	NIC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_1	77.1974092829546	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165958035	165994079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_165958174_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
ENSMUSG00000000544.15_165958036_165994079_2	chr1	+	2286	7	FSM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	229	0	0	0	multi-exon	FALSE	canonical	3	176	junction_6	19.1398362932741	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165958035	165994079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
ENSMUSG00000000555.9_103252713_103275021_1	chr15	-	4213	30	FSM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	169	0	154	0	multi-exon	FALSE	canonical	3	172	junction_15	17.8822280065433	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCAGTCTGTCCTTCCAT	NA	False	NA	2	True	AATAAA	-28	NA	103275021	103252712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ENSMUSG00000000561.15_105866824_105874613_1	chr3	+	1563	9	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	0	-230	intron_retention	FALSE	canonical	3	910	junction_4	50.4256878981338	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCTGACAGTGTTGTGG	NA	False	NA	NA	False	NA	NA	NA	105866823	105874613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873742_105874478
ENSMUSG00000000561.15_105866824_105874613_2	chr3	+	1080	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	139	2463	0	-230	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCTGACAGTGTTGTGG	NA	False	NA	NA	False	NA	NA	NA	105866823	105874613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ENSMUSG00000000561.15_105866824_105875205_1	chr3	+	1672	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	139	1871	0	362	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTTCACCCTTTCCT	NA	False	NA	15	True	AATAAA	-18	NA	105866823	105875205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ENSMUSG00000000561.15_105866824_105875505_1	chr3	+	1972	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	139	1571	0	662	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	2659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTCCCCAGAGCTGT	NA	False	NA	12	True	AATAAA	-16	NA	105866823	105875505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ENSMUSG00000000561.15_105866824_105875505_2	chr3	+	2455	9	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	0	662	intron_retention	FALSE	canonical	3	910	junction_4	50.4256878981338	2285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTCCCCAGAGCTGT	NA	False	NA	12	True	AATAAA	-16	NA	105866823	105875505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873742_105874478
ENSMUSG00000000563.18_105850018_105866580_1	chr3	-	1132	7	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	835	4	0	0	3prime_fragment	FALSE	canonical	3	4041	junction_4	350.10446853602	26406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTTATAAGTTTCATAC	NA	False	NA	-24	True	AATAAA	-12	NA	105866580	105850017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
ENSMUSG00000000563.18_105850018_105866580_2	chr3	-	1126	7	NNC	ENSMUSG00000000563.18	novel	1311	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1738.84055399632	25196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTTATAAGTTTCATAC	NA	False	NA	-24	True	AATAAA	-12	NA	105866580	105850017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_105850374_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
ENSMUSG00000000563.18_105850018_105866580_3	chr3	-	1121	6	NNC	ENSMUSG00000000563.18	novel	1311	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1822.08072269041	13443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTTATAAGTTTCATAC	NA	False	NA	-24	True	AATAAA	-12	NA	105866580	105850017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866437
ENSMUSG00000000568.16_100108862_100126316_1	chr5	-	1205	8	FSM	ENSMUSG00000000568.16	ENSMUST00000112939.10	1670	8	460	5	167	0	multi-exon	FALSE	canonical	3	1800	junction_7	925.260845736521	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTGGCTCTTTTATCA	NA	False	NA	NA	False	AATAAA	-16	NA	100126316	100108861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ENSMUSG00000000568.16_100108862_100126799_1	chr5	-	186	2	NNC	ENSMUSG00000000568.16	novel	1117	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTGGCTCTTTTATCA	NA	False	NA	NA	False	AATAAA	-16	NA	100126799	100108861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_100108960_100126711
ENSMUSG00000000579.15_6869070_6875299_1	chr17	+	810	5	FSM	ENSMUSG00000000579.15	ENSMUST00000092966.5	2589	5	0	1779	0	351	multi-exon	TRUE	canonical	3	5304	junction_1	1714.27572169707	47342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6869069	6875299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_6869236_6870885_6870928_6874010_6874135_6874472_6874551_6874899
ENSMUSG00000000579.15_6869191_6875299_1	chr17	+	689	5	FSM	ENSMUSG00000000579.15	ENSMUST00000092966.5	2589	5	121	1779	0	351	multi-exon	FALSE	canonical	3	5304	junction_1	1714.27572169707	30292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6869190	6875299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_6869236_6870885_6870928_6874010_6874135_6874472_6874551_6874899
ENSMUSG00000000581.9_17198171_17217234_1	chr11	+	1072	5	NNC	ENSMUSG00000000581.9	novel	416	2	NA	NA	-9408	610	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	283.165146160328	2162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTTGTATGTCCTGACT	NA	False	NA	26	True	AATAAA	-27	NA	17198170	17217234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_17198269_17212647_17212795_17213608_17213676_17213950_17214007_17216530
ENSMUSG00000000581.9_17207579_17217234_1	chr11	+	1054	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	-15	1942	0	610	multi-exon	FALSE	canonical	3	609	junction_3	54.4908249157599	2372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTTGTATGTCCTGACT	7316	False	NA	26	True	AATAAA	-27	NA	17207578	17217234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
ENSMUSG00000000581.9_17207579_17218197_1	chr11	+	2017	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	-15	979	0	-979	multi-exon	FALSE	canonical	3	609	junction_3	54.4908249157599	2449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGAGTTTGAAATAATT	7316	False	NA	NA	False	AATAAA	-25	NA	17207578	17218197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
ENSMUSG00000000581.9_17207594_17217071_1	chr11	+	876	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	0	2105	0	447	multi-exon	FALSE	canonical	3	609	junction_3	54.4908249157599	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTTCTGTTCAGTTA	7331	False	NA	NA	False	AATACA	-17	NA	17207593	17217071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
ENSMUSG00000000594.8_54988941_55000595_1	chr11	+	867	4	FSM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	0	3260	0	-3260	multi-exon	FALSE	canonical	3	325	junction_3	15.195028426722	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTCAAGGAATGGGAACCA	NA	False	NA	NA	False	NA	NA	NA	54988940	55000595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203
ENSMUSG00000000594.8_54988941_55001245_1	chr11	+	1517	4	FSM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	0	2610	0	-2610	multi-exon	FALSE	canonical	3	325	junction_3	15.195028426722	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGTTTATATGAAATTGT	NA	False	NA	NA	False	NA	NA	NA	54988940	55001245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203
ENSMUSG00000000594.8_54988941_55001724_1	chr11	+	1996	4	FSM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	0	2131	0	-2131	multi-exon	FALSE	canonical	3	325	junction_3	15.195028426722	2144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGCTCCTTTTCTTG	NA	False	NA	22	True	AATAAA	-15	NA	54988940	55001724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203
ENSMUSG00000000600.16_3853184_3862814_1	chr5	+	1104	7	ISM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	0	28545	0	1098	5prime_fragment	FALSE	canonical	3	75	junction_1	54.5221667458903	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAAATGGCAGCGAAGC	7985	False	NA	NA	False	NA	NA	NA	3853183	3862814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741
ENSMUSG00000000600.16_3853184_3891359_1	chr5	+	2980	17	NNC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	59.7316590574044	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	7985	False	NA	10	True	AATAAA	-23	NA	3853183	3891359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886899_3890873
ENSMUSG00000000682.8_133806149_133819815_1	chr4	-	1879	15	NIC	ENSMUSG00000000682.8	novel	380	2	NA	NA	2534	3610	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTGAAAGAAAAGGGGGGA	NA	False	NA	NA	False	NA	NA	NA	133819815	133806148	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ENSMUSG00000000693.11_83028265_83031442_1	chr6	+	1586	7	NNC	ENSMUSG00000000693.11	novel	3252	9	NA	NA	1416	1899	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCGGTCCTCTAGAACC	1976	False	NA	NA	False	NA	NA	NA	83028264	83031442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_83028616_83028722_83028819_83029453_83029524_83029678_83029803_83030305_83030505_83030593_83030799_83030901
ENSMUSG00000000711.4_128514484_128532134_1	chr10	-	1741	6	FSM	ENSMUSG00000000711.4	ENSMUST00000000727.4	3180	6	-1	1440	-1	-1440	multi-exon	FALSE	canonical	3	160	junction_5	17.0528589978338	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCATGCCCCTGCAGTT	NA	False	NA	NA	False	NA	NA	NA	128532134	128514483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128532054
ENSMUSG00000000739.15_123869588_123884996_1	chr8	-	1150	7	NIC	ENSMUSG00000000739.15	novel	3805	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	23.3380947522857	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGACTCTGTCCCAGG	9756	False	NA	-7	True	AATAAA	-16	NA	123884996	123869587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_123869886_123872080_123872262_123874789_123874885_123875048_123875176_123875957_123876173_123884177_123884342_123884926
ENSMUSG00000000743.10_123931003_123939499_2	chr8	-	2140	6	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	190.847163982072	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCAGACTTTTTTTTTT	9745	False	NA	-4	True	AATAAA	-16	NA	123939499	123931002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935858_123939404
ENSMUSG00000000751.14_75191176_75239136_1	chr11	-	2879	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	14	2184	0	0	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	3579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCTTTGACTGTAAAG	NA	False	NA	-16	True	AATAAA	-21	NA	75239136	75191175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ENSMUSG00000000751.14_75191176_75239136_2	chr11	-	2489	18	NNC	ENSMUSG00000000751.14	novel	2942	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	425.815131191409	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCTTTGACTGTAAAG	NA	False	NA	-16	True	AATAAA	-21	NA	75239136	75191175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_75191443_75191832_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ENSMUSG00000000753.16_75300890_75313381_1	chr11	-	1391	8	FSM	ENSMUSG00000000753.16	ENSMUST00000000769.14	1832	8	146	295	0	0	multi-exon	TRUE	canonical	3	25	junction_1	3.91751691451488	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTAGCCTCTGCAATAAA	5524	False	NA	-33	True	NA	NA	NA	75313381	75300889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_75301220_75301659_75301871_75304732_75304876_75305746_75305951_75306400_75306557_75307055_75307255_75308734_75308823_75313321
ENSMUSG00000000759.15_12664277_12722123_1	chr8	-	3672	22	FSM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	125	0	0	0	multi-exon	TRUE	canonical	3	142	junction_11	12.9206544206397	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATGTGGTTTCTGAA	NA	False	NA	1	True	ATTAAA	-18	NA	12722123	12664276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ENSMUSG00000000794.10_89573971_89586739_1	chr3	+	505	3	Genic_Genomic	ENSMUSG00000000794.10	novel	2884	8	NA	NA	4146	4300	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCCAGCCCACAGAATGA	NA	False	NA	NA	False	NA	NA	NA	89573970	89586739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_89574143_89574242_89574446_89586609
ENSMUSG00000000826.17_181162344_181191383_1	chr2	+	1044	6	FSM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	25	2659	0	0	multi-exon	FALSE	canonical	3	78	junction_5	67.7642973843897	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTGTTTTATCCTTTT	7071	False	NA	22	True	TTTAAA	-18	NA	181162343	181191383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
ENSMUSG00000000826.17_181162344_181191383_2	chr2	+	969	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	66	5543	0	0	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTGTTTTATCCTTTT	7071	False	NA	22	True	TTTAAA	-18	NA	181162343	181191383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
ENSMUSG00000000826.17_181162344_181194677_1	chr2	+	4263	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	66	2249	0	635	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGTTTCTTGAAGT	7071	False	NA	14	True	AATAAA	-15	NA	181162343	181194677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
ENSMUSG00000000826.17_181162344_181194677_2	chr2	+	4338	6	FSM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	25	-635	0	635	multi-exon	FALSE	canonical	3	78	junction_5	67.7642973843897	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGTTTCTTGAAGT	7071	False	NA	14	True	AATAAA	-15	NA	181162343	181194677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
ENSMUSG00000000827.19_181138992_181157180_1	chr2	+	930	7	FSM	ENSMUSG00000000827.19	ENSMUST00000069712.9	1799	7	0	869	0	0	multi-exon	FALSE	canonical	3	271	junction_3	303.991227943615	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTGCCATCCTTTCAA	NA	False	NA	36	True	CATAAA	-33	NA	181138991	181157180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ENSMUSG00000000827.19_181138992_181157180_2	chr2	+	990	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	34	2579	0	0	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTGCCATCCTTTCAA	NA	False	NA	36	True	CATAAA	-33	NA	181138991	181157180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ENSMUSG00000000827.19_181138992_181157180_3	chr2	+	948	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	18	1984	0	0	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTGCCATCCTTTCAA	NA	False	NA	36	True	CATAAA	-33	NA	181138991	181157180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
ENSMUSG00000000827.19_181138992_181157686_1	chr2	+	1454	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	18	1478	0	-363	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTTATGATACAATGTAG	NA	False	NA	19	True	AATAAA	-15	NA	181138991	181157686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
ENSMUSG00000000827.19_181138992_181157686_2	chr2	+	1496	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	34	2073	0	-363	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	2050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTTATGATACAATGTAG	NA	False	NA	19	True	AATAAA	-15	NA	181138991	181157686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ENSMUSG00000000827.19_181138992_181157686_3	chr2	+	1436	7	FSM	ENSMUSG00000000827.19	ENSMUST00000069712.9	1799	7	0	363	0	-363	multi-exon	FALSE	canonical	3	271	junction_3	303.991227943615	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTTATGATACAATGTAG	NA	False	NA	19	True	AATAAA	-15	NA	181138991	181157686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ENSMUSG00000000827.19_181138992_181158550_1	chr2	+	2318	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	18	614	0	501	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCATTTGTTTGGTCTGT	NA	False	NA	10	True	AATAAA	-24	NA	181138991	181158550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
ENSMUSG00000000827.19_181138992_181158550_2	chr2	+	2360	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	34	1209	0	501	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	2292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCATTTGTTTGGTCTGT	NA	False	NA	10	True	AATAAA	-24	NA	181138991	181158550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ENSMUSG00000000876.12_154428611_154445608_1	chr2	-	1836	4	FSM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	20	933	0	-933	multi-exon	FALSE	canonical	3	158	junction_1	13.4246870437348	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACATGTAAAATTAATCTT	NA	False	NA	-18	True	NA	NA	NA	154445608	154428610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_154430013_154434084_154434284_154438121_154438185_154445436
ENSMUSG00000000876.12_154429139_154445608_1	chr2	-	1308	4	FSM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	20	1461	0	-1461	multi-exon	FALSE	canonical	3	158	junction_1	13.4246870437348	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTTTGAGATGCATT	NA	False	NA	NA	False	AATAAA	-13	NA	154445608	154429138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_154430013_154434084_154434284_154438121_154438185_154445436
ENSMUSG00000000876.12_154429507_154445608_1	chr2	-	940	4	FSM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	20	1829	0	-1829	multi-exon	FALSE	canonical	3	158	junction_1	13.4246870437348	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGAGTCTGTGGCTTGA	NA	False	NA	-2	True	NA	NA	NA	154445608	154429506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_154430013_154434084_154434284_154438121_154438185_154445436
ENSMUSG00000000884.18_18317628_18383294_1	chr16	+	1424	8	FSM	ENSMUSG00000000884.18	ENSMUST00000090086.11	3549	8	-10	2135	0	2	multi-exon	FALSE	canonical	3	212	junction_1	38.76564858485	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGGTGGGAACTTCC	NA	False	NA	19	True	AATAAA	-21	NA	18317627	18383294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ENSMUSG00000000884.18_18317690_18383294_1	chr16	+	1381	8	NNC	ENSMUSG00000000884.18	novel	3549	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	106.703480041943	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGGTGGGAACTTCC	NA	False	NA	19	True	AATAAA	-21	NA	18317689	18383294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_18317721_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ENSMUSG00000000901.18_75759056_75768309_1	chr10	-	1719	9	NNC	ENSMUSG00000000901.18	novel	1793	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	71.7896232055859	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	5083	False	NA	-3	True	ATTAAA	-17	NA	75768309	75759055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_75759325_75759866_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ENSMUSG00000000902.14_75750557_75757423_1	chr10	-	870	3	ISM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	25	17946	0	-4459	5prime_fragment	FALSE	canonical	3	799	junction_1	152.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCGAAAGAATTTTTCT	6889	False	NA	NA	False	GATAAA	-40	NA	75757423	75750556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_75751028_75752633_75752746_75757136
ENSMUSG00000000903.4_75776750_75785491_1	chr10	+	769	3	NNC	ENSMUSG00000000903.4	novel	729	2	NA	NA	-2141	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.5	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGATTTTGATGATTG	NA	False	NA	NA	False	AATAAA	-31	NA	75776749	75785491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_75776873_75778993_75779125_75784976
ENSMUSG00000000915.16_124142704_124170321_1	chr5	+	2510	4	NIC	ENSMUSG00000102725.3	novel	447	2	NA	NA	-7	26107	intron_retention	FALSE	non_canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCGCCGACCGGAAGCGC	NA	False	NA	NA	False	NA	NA	NA	124142703	124170321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_124144802_124145671_124145755_124148750_124148923_124170164
ENSMUSG00000000916.16_135398807_135404997_1	chr5	+	1583	10	NNC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	92.978027405656	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGATCACAGTTTTATT	NA	False	NA	18	True	AATAAA	-18	NA	135398806	135404997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404734
ENSMUSG00000000958.11_54606901_54655283_1	chr14	-	2179	11	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	53.915118473393	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655283	54606900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654228_54655205
ENSMUSG00000000958.11_54606901_54655283_2	chr14	-	2241	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_11	59.7364736236726	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655283	54606900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54654045_54654228_54655205
ENSMUSG00000000959.8_54598298_54601244_1	chr14	+	730	3	FSM	ENSMUSG00000000959.8	ENSMUST00000198107.2	1438	3	0	708	0	-708	multi-exon	FALSE	canonical	3	527	junction_1	34.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGTTTACAGTTTCAAG	NA	False	NA	NA	False	NA	NA	NA	54598297	54601244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_54598375_54598778_54598926_54600738
ENSMUSG00000000959.8_54598298_54605880_1	chr14	+	1288	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	0	1250	0	-214	multi-exon	TRUE	canonical	3	499	junction_4	29.1475598792348	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCTTGGCAAGACACAC	NA	False	NA	NA	False	NA	NA	NA	54598297	54605880	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ENSMUSG00000000959.8_54598298_54606097_1	chr14	+	1499	10	NNC	ENSMUSG00000000959.8	novel	2538	10	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	171.417618697729	2529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTTGTCTGGGCTT	NA	False	NA	24	True	AGTAAA	-1	NA	54598297	54606097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_54598375_54598778_54598926_54600744_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ENSMUSG00000000959.8_54598298_54606097_3	chr14	+	1429	10	NNC	ENSMUSG00000000959.8	novel	2538	10	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	170.425466131599	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTTGTCTGGGCTT	NA	False	NA	24	True	AGTAAA	-1	NA	54598297	54606097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_54598375_54598778_54598926_54600738_54600877_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ENSMUSG00000000959.8_54598298_54606910_1	chr14	+	2318	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	0	220	0	-220	multi-exon	FALSE	canonical	3	499	junction_4	29.1475598792348	2681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTATTGTTTTGCATC	NA	False	NA	13	True	AATAAA	-25	NA	54598297	54606910	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ENSMUSG00000000959.8_54606901_54655382_1	chr14	+	2401	14	NNC	ENSMUSG00000000959.8	novel	2538	10	NA	NA	1813	48252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGGAAGCTGTTGCATCA	3299	False	NA	NA	False	NA	NA	NA	54606900	54655382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54650180_54650242_54651024_54651105_54651336_54651471_54654045_54654228_54655357
ENSMUSG00000000959.8_54606901_54655382_2	chr14	+	2188	12	NNC	ENSMUSG00000000959.8	novel	2538	10	NA	NA	1813	48252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGGAAGCTGTTGCATCA	3299	False	NA	NA	False	NA	NA	NA	54606900	54655382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54654045_54654228_54655357
ENSMUSG00000000959.8_54606901_54655382_3	chr14	+	2126	11	NNC	ENSMUSG00000000959.8	novel	2538	10	NA	NA	1813	48252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGGAAGCTGTTGCATCA	3299	False	NA	NA	False	NA	NA	NA	54606900	54655382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654228_54655357
ENSMUSG00000000959.8_54606901_54655382_4	chr14	+	2321	13	NNC	ENSMUSG00000000959.8	novel	2538	10	NA	NA	1813	48252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGGAAGCTGTTGCATCA	3299	False	NA	NA	False	NA	NA	NA	54606900	54655382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54650180_54650242_54651336_54651471_54654045_54654228_54655357
ENSMUSG00000000976.14_83644522_83672848_1	chr11	+	3882	20	FSM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	0	1732	0	1	multi-exon	TRUE	canonical	3	50	junction_5	6.60059596066985	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAATTGTGTTTTCAAGA	4017	False	NA	5	True	AATAAA	-24	NA	83644521	83672848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ENSMUSG00000001016.13_90383464_90395686_1	chr3	+	2087	13	FSM	ENSMUSG00000001016.13	ENSMUST00000196769.5	1702	13	31	-416	0	0	multi-exon	FALSE	canonical	3	1252	junction_8	69.553137160655	3896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTACAAGCATTTATTTA	NA	False	NA	18	True	AATAAA	-23	NA	90383463	90395686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394405_90394533_90394625_90394765
ENSMUSG00000001016.13_90383464_90395686_2	chr3	+	202	3	NNC	ENSMUSG00000001016.13	novel	3164	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	658	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTACAAGCATTTATTTA	NA	False	NA	18	True	AATAAA	-23	NA	90383463	90395686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_90383553_90384311_90384347_90395608
ENSMUSG00000001017.16_90407002_90416774_1	chr3	-	1113	5	FSM	ENSMUSG00000001017.16	ENSMUST00000107346.8	1321	5	7	201	-5	0	multi-exon	FALSE	canonical	3	97	junction_1	566.644233624591	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGTTGAGTTTGTTT	NA	False	NA	-28	True	NA	NA	NA	90416774	90407001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90407415_90410402_90410590_90413414_90413569_90414851_90414934_90416497
ENSMUSG00000001017.16_90407002_90416774_3	chr3	-	1251	6	FSM	ENSMUSG00000001017.16	ENSMUST00000049937.13	2012	6	31	730	-5	0	multi-exon	FALSE	canonical	3	892	junction_3	230.9202459725	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGTTGAGTTTGTTT	NA	False	NA	-28	True	NA	NA	NA	90416774	90407001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416497
ENSMUSG00000001018.16_90383464_90395686_1	chr3	-	2011	14	NNC	ENSMUSG00000001018.16	novel	1928	4	NA	NA	2049	11869	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCCCAACAAACGCCTGC	NA	False	NA	NA	False	NA	NA	NA	90395686	90383463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390089_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ENSMUSG00000001018.16_90383464_90395686_3	chr3	-	2017	14	NIC	ENSMUSG00000001018.16	novel	1928	4	NA	NA	2049	11869	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	4515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCCCAACAAACGCCTGC	NA	False	NA	NA	False	NA	NA	NA	90395686	90383463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ENSMUSG00000001018.16_90395680_90398308_1	chr3	-	1557	4	FSM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	32	339	-8	0	multi-exon	FALSE	canonical	3	599	junction_3	50.1663898109747	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAAATTTATTTTAT	NA	False	NA	-29	True	AATAAA	-20	NA	90398308	90395679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398138
ENSMUSG00000001025.9_90520461_90521722_1	chr3	+	460	3	FSM	ENSMUSG00000001025.9	ENSMUST00000001051.9	731	3	272	-1	0	1	multi-exon	FALSE	canonical	3	31	junction_2	1	250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGTTCTGGCTTCCC	5469	False	NA	23	True	AATAAA	-23	NA	90520460	90521722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_90520534_90521049_90521212_90521497
ENSMUSG00000001034.18_61379638_61385041_1	chr11	-	3061	7	NIC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	-27	0	intron_retention	FALSE	canonical	3	42	junction_5	71.8410668690888	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTCATTTTTGGGGT	NA	False	NA	1	True	AATACA	-19	NA	61385041	61379637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384349_61384781_61384905
ENSMUSG00000001036.18_61409381_61470500_2	chr11	-	2890	9	FSM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	11	1306	-4	-1305	multi-exon	FALSE	canonical	3	259	junction_6	30.1330383466387	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGCAGCCTCTAGTTGCC	NA	False	NA	NA	False	ATTAAA	-30	NA	61470500	61409380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ENSMUSG00000001039.13_61396029_61407779_1	chr11	+	584	7	NNC	ENSMUSG00000001039.13	novel	817	7	NA	NA	0	4022	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	127.20019217316	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTGGTCATGGTGCT	NA	False	NA	NA	False	NA	NA	NA	61396028	61407779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61407673
ENSMUSG00000001056.4_51510598_51514264_1	chr11	+	278	2	NNC	ENSMUSG00000001056.4	novel	825	3	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGTGTGTGGGTGTTCTT	NA	False	NA	24	True	AGTAAA	-19	NA	51510597	51514264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_51510791_51514179
ENSMUSG00000001056.4_51510598_51514264_2	chr11	+	729	4	FSM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	36	277	0	8	multi-exon	FALSE	canonical	3	5273	junction_1	70.8723421998235	19999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGTGTGTGGGTGTTCTT	NA	False	NA	24	True	AGTAAA	-19	NA	51510597	51514264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918
ENSMUSG00000001082.13_34790992_34793868_1	chr5	-	1354	11	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	115.449599392982	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCTTTCCGTCTTACTA	NA	False	NA	-6	True	AATAAA	-18	NA	34793868	34790991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793000_34793364_34793469_34793753
ENSMUSG00000001082.13_34790992_34794502_1	chr5	-	2021	12	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	-18	0	intron_retention	FALSE	canonical	3	174	junction_11	68.0427672998254	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCTTTCCGTCTTACTA	NA	False	NA	-6	True	AATAAA	-18	NA	34794502	34790991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
ENSMUSG00000001089.15_136197072_136269838_1	chr4	+	2457	4	ISM	ENSMUSG00000001089.15	ENSMUST00000170102.8	7526	5	0	6788	0	1860	5prime_fragment	FALSE	canonical	3	55	junction_3	52.8225541054408	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGCCAAACTCAAGAGAAA	4157	False	NA	NA	False	NA	NA	NA	136197071	136269838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_136197162_136248651_136248755_136266435_136266528_136267666
ENSMUSG00000001089.15_136197072_136269838_2	chr4	+	2365	3	ISM	ENSMUSG00000001089.15	ENSMUST00000105849.9	7438	4	0	6792	0	1860	5prime_fragment	FALSE	canonical	3	86	junction_2	41.5	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGCCAAACTCAAGAGAAA	4157	False	NA	NA	False	NA	NA	NA	136197071	136269838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_136197162_136248651_136248755_136267666
ENSMUSG00000001098.16_114503554_114518544_1	chr5	-	1152	7	FSM	ENSMUSG00000001098.16	ENSMUST00000102581.11	3103	7	25	1926	0	129	multi-exon	FALSE	canonical	3	95	junction_4	16.3401346383682	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGATTGCTTCTGTGTTGG	NA	False	NA	NA	False	NA	NA	NA	114518544	114503553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507089_114508119_114508290_114512956_114513171_114518486
ENSMUSG00000001100.11_78403019_78412997_1	chr11	+	1489	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	0	565	0	0	multi-exon	FALSE	canonical	3	1074	junction_9	50.3904752904753	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACGGCCATTTTTGTCT	1635	False	NA	15	True	AATAAA	-17	NA	78403018	78412997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ENSMUSG00000001100.11_78403019_78413562_1	chr11	+	2045	10	NNC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	367.967087900233	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1635	False	NA	18	True	ATTAAA	-15	NA	78403018	78413562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409987_78410132_78411977_78412058_78412619
ENSMUSG00000001100.11_78403214_78412997_1	chr11	+	1294	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	195	565	0	0	multi-exon	FALSE	canonical	3	1074	junction_9	50.3904752904753	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACGGCCATTTTTGTCT	1830	False	NA	15	True	AATAAA	-17	NA	78403213	78412997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ENSMUSG00000001105.16_78427254_78432563_1	chr11	+	845	5	FSM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	-15	-248	0	0	multi-exon	FALSE	canonical	3	256	junction_1	91.1125677390337	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGTGTGCATTATTT	NA	False	NA	24	True	AATAAA	-33	NA	78427253	78432563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720_78431825_78432186
ENSMUSG00000001105.16_78427254_78432563_2	chr11	+	1436	5	FSM	ENSMUSG00000001105.16	ENSMUST00000137120.8	1167	5	-17	-252	0	0	multi-exon	FALSE	canonical	3	238	junction_1	109.732344821388	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGTGTGCATTATTT	NA	False	NA	24	True	AATAAA	-33	NA	78427253	78432563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720
ENSMUSG00000001127.13_20664053_20719128_1	chrX	+	979	7	NNC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	39	junction_6	147.422766973837	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTTTCTCCAACTATCT	1123	False	NA	NA	False	AATAAA	-12	NA	20664052	20719128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20718834
ENSMUSG00000001127.13_20664053_20726629_1	chrX	+	2220	16	NIC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	0	-107	combination_of_known_junctions	FALSE	non_canonical	1	66	junction_12	96.2243674382372	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCCTGATGTGTCTT	1123	False	NA	23	True	NA	NA	NA	20664052	20726629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ENSMUSG00000001127.13_20664053_20726758_1	chrX	+	2349	16	NIC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	1	66	junction_12	96.2243674382372	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	1123	False	NA	23	True	NA	NA	NA	20664052	20726758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ENSMUSG00000001127.13_20714817_20719128_1	chrX	+	953	7	NNC	ENSMUSG00000001127.13	novel	1520	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_6	124.993333155546	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTTTCTCCAACTATCT	6308	False	NA	NA	False	AATAAA	-12	NA	20714816	20719128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20718834
ENSMUSG00000001128.8_20791693_20794353_1	chrX	-	998	3	ISM	ENSMUSG00000001128.8	ENSMUST00000001156.8	1636	9	3441	0	-500	0	intron_retention	FALSE	canonical	3	117	junction_2	8	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATAATATTGTGAAATAT	NA	False	NA	73	True	AATAGA	-13	NA	20794353	20791692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_20791999_20793519_20793632_20793773
ENSMUSG00000001131.12_20736405_20740972_1	chrX	+	803	5	NIC	ENSMUSG00000001131.12	novel	883	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	293.187226870476	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	16	True	AATAAA	-17	NA	20736404	20740972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_20736564_20737272_20737402_20739288_20739416_20739606_20739732_20740709
ENSMUSG00000001131.12_20736460_20740972_1	chrX	+	748	5	NIC	ENSMUSG00000001131.12	novel	883	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	293.187226870476	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	16	True	AATAAA	-17	NA	20736459	20740972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_20736564_20737272_20737402_20739288_20739416_20739606_20739732_20740709
ENSMUSG00000001134.10_20818162_20828217_2	chrX	-	525	7	NNC	ENSMUSG00000001134.10	novel	875	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	232.923926541598	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATAGTCCTTTTTTCCC	NA	False	NA	-8	True	ATTAAA	-20	NA	20828217	20818161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827968_20828026_20828172
ENSMUSG00000001134.10_20818162_20828217_3	chrX	-	759	6	NIC	ENSMUSG00000001134.10	novel	875	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	539	junction_4	46.7478341744299	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATAGTCCTTTTTTCCC	NA	False	NA	-8	True	ATTAAA	-20	NA	20828217	20818161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ENSMUSG00000001134.10_20818162_20828217_4	chrX	-	468	6	NIC	ENSMUSG00000001134.10	novel	636	7	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	241.379866600344	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATAGTCCTTTTTTCCC	NA	False	NA	-8	True	ATTAAA	-20	NA	20828217	20818161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20828172
ENSMUSG00000001134.10_20818162_20828217_5	chrX	-	533	7	NNC	ENSMUSG00000001134.10	novel	875	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	227.131386353068	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATAGTCCTTTTTTCCC	NA	False	NA	-8	True	ATTAAA	-20	NA	20828217	20818161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827960_20828026_20828172
ENSMUSG00000001134.10_20818162_20828217_6	chrX	-	467	6	NIC	ENSMUSG00000001134.10	novel	875	7	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	227.721760049408	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATAGTCCTTTTTTCCC	NA	False	NA	-8	True	ATTAAA	-20	NA	20828217	20818161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_20818263_20818446_20818511_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ENSMUSG00000001134.10_20818162_20828217_7	chrX	-	569	7	NNC	ENSMUSG00000001134.10	novel	875	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	222.740070236338	2369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATAGTCCTTTTTTCCC	NA	False	NA	-8	True	ATTAAA	-20	NA	20828217	20818161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828178
ENSMUSG00000001143.14_36466556_36484338_1	chr1	-	1432	6	ISM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	14	5410	0	917	5prime_fragment	FALSE	canonical	3	153	junction_4	20.8480214888608	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTTTATTGTCATTAA	NA	False	NA	NA	False	TATAAA	-20	NA	36484338	36466555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ENSMUSG00000001150.8_76304761_76306123_1	chr10	+	629	2	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	0	45568	0	-13014	5prime_fragment	FALSE	canonical	3	150	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGACTCTTCTCTAGT	NA	False	NA	NA	False	NA	NA	NA	76304760	76306123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_76305049_76305782
ENSMUSG00000001150.8_76342413_76351693_1	chr10	+	1131	6	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	37652	-2	-1810	2	3prime_fragment	FALSE	canonical	3	231	junction_3	32.6153338170867	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTAGTTTTATGAAT	NA	False	NA	14	True	AATAAA	-20	NA	76342412	76351693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ENSMUSG00000001150.8_76346953_76351691_1	chr10	+	532	3	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	42192	0	225	0	3prime_fragment	FALSE	canonical	3	292	junction_1	14	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	1503	False	NA	12	True	AATAAA	-18	NA	76346952	76351691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_76347058_76348251_76348403_76351415
ENSMUSG00000001151.11_76187101_76205830_1	chr10	-	1649	9	ISM	ENSMUSG00000001151.11	ENSMUST00000220395.2	6762	30	46916	4	-1163	0	3prime_fragment	FALSE	canonical	3	168	junction_5	27.5632794674364	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTCCTGGCTACAGCC	NA	False	NA	-20	True	AATAAA	-14	NA	76205830	76187100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668
ENSMUSG00000001158.14_86652133_86661500_1	chr6	-	878	6	NNC	ENSMUSG00000001158.14	novel	885	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	795.39876791456	5674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGACTTGTTTTGTTT	7650	False	NA	1	True	ATTAAA	-29	NA	86661500	86652132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659952_86661424
ENSMUSG00000001158.14_86652133_86661500_2	chr6	-	875	6	NNC	ENSMUSG00000001158.14	novel	885	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	773.07738293136	5775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGACTTGTTTTGTTT	7650	False	NA	1	True	ATTAAA	-29	NA	86661500	86652132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_86652563_86653203_86653263_86657888_86657969_86658572_86658686_86659837_86659959_86661428
ENSMUSG00000001158.14_86652387_86661500_1	chr6	-	627	6	FSM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	4	254	-1	0	multi-exon	FALSE	canonical	3	1763	junction_5	100.541732628794	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTATTTATGACACCCAG	7650	False	NA	31	True	TATAAA	-9	NA	86661500	86652386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
ENSMUSG00000001173.16_47001332_47036689_1	chrX	+	2014	17	ISM	ENSMUSG00000001173.16	ENSMUST00000115020.8	3210	19	17	9280	0	-421	5prime_fragment	FALSE	non_canonical	0	0	junction_1	27.0043399289818	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCCAATACTGCAAGCCA	NA	False	NA	NA	False	NA	NA	NA	47001331	47036689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583
ENSMUSG00000001173.16_47001332_47054745_1	chrX	+	5161	23	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	0	0	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	25.9866860380401	347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGTGATCTGACTGAG	NA	False	NA	17	True	AATAAA	-18	NA	47001331	47054745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ENSMUSG00000001175.17_100165788_100172778_1	chr12	+	726	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	94	3295	0	24	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCATTTCTTCATTCTGTT	9259	False	NA	8	True	NA	NA	NA	100165787	100172778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUSG00000001175.17_100165788_100173085_1	chr12	+	1033	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	94	2988	0	331	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	1707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCTTCTAGTTCAATCT	9259	False	NA	18	True	ATTAAA	-35	NA	100165787	100173085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUSG00000001175.17_100165788_100173574_1	chr12	+	1514	5	NNC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	0	820	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1532.38105166437	1695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTAAATGCTTTGTA	9259	False	NA	30	True	AATAAA	-19	NA	100165787	100173574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_100165980_100169814_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUSG00000001175.17_100165788_100173574_2	chr12	+	1522	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	94	2499	0	820	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	8126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTAAATGCTTTGTA	9259	False	NA	30	True	AATAAA	-19	NA	100165787	100173574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUSG00000001175.17_100165788_100173574_3	chr12	+	1518	6	NNC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	0	820	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1468.46442244952	6843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTAAATGCTTTGTA	9259	False	NA	30	True	AATAAA	-19	NA	100165787	100173574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_100165976_100168651_100168687_100169841_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUSG00000001175.17_100165788_100173574_4	chr12	+	1517	5	NNC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	0	820	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1532.38105166437	5967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTAAATGCTTTGTA	9259	False	NA	30	True	AATAAA	-19	NA	100165787	100173574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_100166002_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUSG00000001228.15_56610321_56629729_1	chr17	+	2820	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	0	390	at_least_one_novel_splicesite	TRUE	canonical	3	268	junction_4	539.303830038087	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTTTTTGTTTTTT	420	False	NA	28	True	NA	NA	NA	56610320	56629729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUSG00000001228.15_56610321_56629729_2	chr17	+	2829	17	FSM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	0	757	0	390	multi-exon	FALSE	canonical	3	1413	junction_6	319.856779473251	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTTTTTGTTTTTT	420	False	NA	28	True	NA	NA	NA	56610320	56629729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUSG00000001228.15_56610400_56629438_1	chr17	+	2459	17	FSM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	79	1048	0	99	multi-exon	FALSE	canonical	3	1413	junction_6	319.856779473251	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAACCAGCCCTTGCAGA	499	False	NA	NA	False	NA	NA	NA	56610399	56629438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUSG00000001228.15_56610400_56629729_1	chr17	+	2750	17	FSM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	79	757	0	390	multi-exon	FALSE	canonical	3	1413	junction_6	319.856779473251	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTTTTTGTTTTTT	499	False	NA	28	True	NA	NA	NA	56610399	56629729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUSG00000001228.15_56610400_56630486_1	chr17	+	3498	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_4	539.303830038087	2545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	499	False	NA	36	True	AATAAA	-20	NA	56610399	56630486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUSG00000001228.15_56611348_56629438_1	chr17	+	2343	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	0	1048	0	99	multi-exon	FALSE	canonical	3	638	junction_1	450.210766613816	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAACCAGCCCTTGCAGA	1447	False	NA	NA	False	NA	NA	NA	56611347	56629438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUSG00000001228.15_56611348_56629729_1	chr17	+	2634	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	0	757	0	390	multi-exon	FALSE	canonical	3	638	junction_1	450.210766613816	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTTTTTGTTTTTT	1447	False	NA	28	True	NA	NA	NA	56611347	56629729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUSG00000001228.15_56611348_56630486_1	chr17	+	3382	17	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_4	617.393054377639	1792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1447	False	NA	36	True	AATAAA	-20	NA	56611347	56630486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUSG00000001240.14_101137138_101139076_1	chr11	+	894	4	FSM	ENSMUSG00000001240.14	ENSMUST00000129680.8	1178	4	284	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	6.16441400296898	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCCTTCCTAGTGGGGT	NA	False	NA	17	True	AATAAA	-18	NA	101137137	101139076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101137399_101137880_101137971_101138411_101138515_101138636
ENSMUSG00000001247.17_30657200_30672612_1	chr7	-	1833	9	FSM	ENSMUSG00000001247.17	ENSMUST00000108116.10	2071	9	240	-2	135	0	multi-exon	TRUE	canonical	3	93	junction_6	34.291945118351	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGCCTCTTGTTTTGCT	NA	False	NA	-3	True	AATAAA	-17	NA	30672612	30657199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30665393_30665514_30671292_30671638_30672504
ENSMUSG00000001247.17_30657200_30672612_2	chr7	-	1890	10	FSM	ENSMUSG00000001247.17	ENSMUST00000205961.2	2021	10	135	-4	135	0	multi-exon	FALSE	canonical	3	74	junction_7	47.1029867208513	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGCCTCTTGTTTTGCT	NA	False	NA	-3	True	AATAAA	-17	NA	30672612	30657199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30662235_30662293_30665393_30665514_30671292_30671638_30672504
ENSMUSG00000001270.10_111635795_111638731_1	chr12	-	1371	8	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2750.14931691101	3088	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638731	111635794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637708_111637782_111637858_111638014_111638199_111638408_111638663
ENSMUSG00000001270.10_111635795_111638731_2	chr12	-	1421	8	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2750.14931691101	42338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638731	111635794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637469_111637648_111637782_111637858_111638014_111638199_111638408_111638663
ENSMUSG00000001270.10_111635795_111638731_3	chr12	-	1678	6	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-14	0	intron_retention	FALSE	canonical	3	7551	junction_4	349.982056682911	2263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638731	111635794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111638014_111638199_111638408_111638663
ENSMUSG00000001270.10_111635795_111638731_4	chr12	-	2265	5	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-14	0	intron_retention	FALSE	canonical	3	7551	junction_3	376.663643055711	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638731	111635794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_111636176_111636258_111636449_111636595_111638014_111638199_111638408_111638663
ENSMUSG00000001270.10_111635795_111638731_5	chr12	-	1415	8	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2746.09769138176	14825	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638731	111635794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_111636176_111636258_111636449_111636595_111636704_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
ENSMUSG00000001270.10_111635795_111638731_6	chr12	-	1418	8	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2729.73509217825	40919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638731	111635794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638676
ENSMUSG00000001270.10_111635795_111638731_7	chr12	-	1422	8	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2750.14931691101	44266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638731	111635794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637657_111637782_111637858_111638014_111638199_111638408_111638663
ENSMUSG00000001270.10_111635795_111638731_8	chr12	-	1601	7	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-14	0	intron_retention	FALSE	canonical	3	7551	junction_5	321.637477086652	1727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638731	111635794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637782_111637858_111638014_111638199_111638408_111638663
ENSMUSG00000001270.10_111635952_111638731_1	chr12	-	1351	7	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-14	-157	intron_retention	FALSE	canonical	3	7551	junction_5	335.592345297419	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGGCAGTGCCCGCCATG	NA	False	NA	-120	True	NA	NA	NA	111638731	111635951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111638014_111638199_111638408_111638663
ENSMUSG00000001270.10_111635952_111638731_2	chr12	-	1274	8	FSM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	41	157	-14	-157	multi-exon	FALSE	canonical	3	7551	junction_6	311.265160273359	2589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGGCAGTGCCCGCCATG	NA	False	NA	-120	True	NA	NA	NA	111638731	111635951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
ENSMUSG00000001285.13_102240155_102246286_1	chr15	+	1181	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	11	288	0	0	multi-exon	FALSE	canonical	3	485	junction_2	12.1620995994387	1902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCCAGTCCCTGATCCA	5938	False	NA	16	True	AATAAA	-17	NA	102240154	102246286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ENSMUSG00000001285.13_102240352_102246286_1	chr15	+	1120	6	NIC	ENSMUSG00000001285.13	novel	1319	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	485	junction_1	11.5654658358408	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCCAGTCCCTGATCCA	6135	False	NA	16	True	AATAAA	-17	NA	102240351	102246286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ENSMUSG00000001289.13_102234603_102239925_1	chr15	+	627	6	FSM	ENSMUSG00000001289.13	ENSMUST00000166658.8	1062	6	52	383	0	4	multi-exon	FALSE	canonical	3	835	junction_1	29.5932424718887	6433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGGTCTATTCTTGCA	386	False	NA	30	True	AATAAA	-18	NA	102234602	102239925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102234696_102234867_102234971_102235252_102235285_102236956_102237032_102237146_102237253_102239707
ENSMUSG00000001289.13_102234603_102239925_2	chr15	+	610	5	NNC	ENSMUSG00000001289.13	novel	827	5	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	375.640369901852	5140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGGTCTATTCTTGCA	386	False	NA	30	True	AATAAA	-18	NA	102234602	102239925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_102234696_102234867_102234986_102236956_102237032_102237146_102237253_102239707
ENSMUSG00000001305.6_186453289_186481525_1	chr1	-	1177	5	FSM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	30	114	-3	0	multi-exon	FALSE	canonical	3	944	junction_3	58.7962583843564	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAATCTCTGCTTCCCTG	NA	False	NA	-16	True	ATTAAA	-12	NA	186481525	186453288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472061_186481360
ENSMUSG00000001305.6_186453443_186481525_1	chr1	-	1023	5	FSM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	30	268	-3	-154	multi-exon	FALSE	canonical	3	944	junction_3	58.7962583843564	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACCTGTTTTTCTAAAA	NA	False	NA	-21	True	ATTAAA	-26	NA	186481525	186453442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472061_186481360
ENSMUSG00000001313.13_101355825_101362679_1	chr11	+	1275	5	NIC	ENSMUSG00000001313.13	novel	1578	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	68.3245929369506	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGACTTAGTTTTGTT	7809	False	NA	21	True	AATAAA	-21	NA	101355824	101362679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_101355971_101359758_101359847_101360838_101360949_101361543_101361679_101361883
ENSMUSG00000001313.13_101359155_101362679_1	chr11	+	1240	5	FSM	ENSMUSG00000001313.13	ENSMUST00000001347.7	1394	5	154	0	154	0	multi-exon	FALSE	canonical	3	109	junction_1	23.8051990119806	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGACTTAGTTTTGTT	NA	False	NA	21	True	AATAAA	-21	NA	101359154	101362679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101359266_101359758_101359847_101360838_101360949_101361543_101361679_101361883
ENSMUSG00000001323.18_74788924_74800168_1	chr11	-	3369	15	NIC	ENSMUSG00000001323.18	novel	3699	9	NA	NA	16316	8261	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAACTCTACTTCCGGG	NA	False	NA	NA	False	NA	NA	NA	74800168	74788923	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ENSMUSG00000001323.18_74799381_74816503_1	chr11	-	1381	9	FSM	ENSMUSG00000001323.18	ENSMUST00000108448.8	3239	9	96	1762	-2	1186	multi-exon	FALSE	non_canonical	0	0	junction_7	30.0956807532244	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAAGTGTAAGTAATC	NA	False	NA	NA	False	TTTAAA	-21	NA	74816503	74799380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803959_74810262_74810489_74816444
ENSMUSG00000001323.18_74799381_74816503_2	chr11	-	1156	8	FSM	ENSMUSG00000001323.18	ENSMUST00000121738.8	3183	8	271	1756	-2	1186	multi-exon	FALSE	canonical	3	39	junction_7	16.4527771987291	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAAGTGTAAGTAATC	NA	False	NA	NA	False	TTTAAA	-21	NA	74816503	74799380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74816444
ENSMUSG00000001348.16_22038023_22042949_1	chr9	-	1341	5	NNC	ENSMUSG00000001348.16	novel	1419	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_4	83.7048385698222	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	9074	False	NA	-19	True	AATAAA	-21	NA	22042949	22038022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22042885
ENSMUSG00000001348.16_22038023_22043111_1	chr9	-	1503	5	NNC	ENSMUSG00000001348.16	novel	1356	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_4	83.7048385698222	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	8912	False	NA	-19	True	AATAAA	-21	NA	22043111	22038022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22042885
ENSMUSG00000001366.15_77988781_77998032_1	chr9	-	1219	7	NNC	ENSMUSG00000001366.15	novel	2155	13	NA	NA	-3114	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	19.2563120964414	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGGATGGCCTTTAA	NA	False	NA	3	True	AATAAA	-31	NA	77998032	77988780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_77997955
ENSMUSG00000001380.8_36899581_36916210_1	chr18	-	1934	13	NNC	ENSMUSG00000001380.8	novel	1989	13	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	196.763958985266	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTGTGTCCTTGATGC	NA	False	NA	-2	True	AATAAA	-16	NA	36916210	36899580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_36900007_36900242_36900390_36901139_36901250_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
ENSMUSG00000001380.8_36899581_36916210_2	chr18	-	1334	8	NNC	ENSMUSG00000001380.8	novel	1989	13	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	252.407671541618	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTGTGTCCTTGATGC	NA	False	NA	-2	True	AATAAA	-16	NA	36916210	36899580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903894_36915732_36915823_36916063
ENSMUSG00000001380.8_36899743_36916210_1	chr18	-	1779	13	FSM	ENSMUSG00000001380.8	ENSMUST00000001416.8	1989	13	48	162	-35	0	multi-exon	FALSE	canonical	3	550	junction_8	68.8118913334671	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACAATGGCCAGGTAC	NA	False	NA	35	True	NA	NA	NA	36916210	36899742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
ENSMUSG00000001383.10_36926929_36931335_1	chr18	+	926	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	0	1384	0	199	multi-exon	FALSE	canonical	3	554	junction_5	81.4331627778266	2840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCTTTCCCCATATCCC	6616	False	NA	29	True	AATAAA	-20	NA	36926928	36931335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
ENSMUSG00000001403.14_164611818_164614827_1	chr2	+	959	6	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	668.177940372174	10471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	False	NA	NA	False	AATAAA	-25	NA	164611817	164614827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_164612001_164612286_164612315_164613212_164613300_164613773_164613979_164614086_164614147_164614431
ENSMUSG00000001403.14_164611818_164614827_10	chr2	+	954	5	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	715.889787257787	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	False	NA	NA	False	AATAAA	-25	NA	164611817	164614827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_164612016_164613212_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUSG00000001403.14_164611818_164614827_4	chr2	+	961	5	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	715.889787257787	3061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	False	NA	NA	False	AATAAA	-25	NA	164611817	164614827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_164612005_164613194_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUSG00000001403.14_164611818_164614827_5	chr2	+	957	5	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	715.889787257787	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	False	NA	NA	False	AATAAA	-25	NA	164611817	164614827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_164612001_164613194_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUSG00000001403.14_164611818_164614827_7	chr2	+	969	5	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	715.889787257787	7457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	False	NA	NA	False	AATAAA	-25	NA	164611817	164614827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_164612005_164613186_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUSG00000001403.14_164611818_164614827_8	chr2	+	957	6	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	665.532688904159	9729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	False	NA	NA	False	AATAAA	-25	NA	164611817	164614827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_164612001_164612286_164612315_164613212_164613300_164613783_164613979_164614086_164614147_164614423
ENSMUSG00000001403.14_164611818_164614827_9	chr2	+	946	5	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	715.889787257787	2058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	False	NA	NA	False	AATAAA	-25	NA	164611817	164614827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_164612008_164613212_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUSG00000001416.14_88204460_88229074_1	chr3	+	1934	14	NNC	ENSMUSG00000001416.14	novel	1977	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	689.31508756216	12306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTGTCATGTGTTTTT	3841	False	NA	23	True	ATTAAA	-15	NA	88204459	88229074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220868_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ENSMUSG00000001418.14_88232362_88235938_1	chr3	+	1505	6	FSM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	32	2682	0	50	multi-exon	FALSE	canonical	3	936	junction_4	66.9489357645064	2442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGTCTCTCTTATTTT	4027	False	NA	16	True	AATAGA	-19	NA	88232361	88235938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
ENSMUSG00000001418.14_88232362_88235938_2	chr3	+	1688	5	NIC	ENSMUSG00000001418.14	novel	4219	6	NA	NA	0	50	intron_retention	FALSE	canonical	3	936	junction_3	74.2596795037522	2415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGTCTCTCTTATTTT	4027	False	NA	16	True	AATAGA	-19	NA	88232361	88235938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_88232509_88232983_88233620_88233717_88233937_88235163_88235421_88235509
ENSMUSG00000001418.14_88232362_88235938_3	chr3	+	1286	5	NIC	ENSMUSG00000001418.14	novel	4219	6	NA	NA	0	50	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	445.742358319243	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGTCTCTCTTATTTT	4027	False	NA	16	True	AATAGA	-19	NA	88232361	88235938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_88232509_88232983_88233239_88233421_88233620_88235163_88235421_88235509
ENSMUSG00000001424.15_28512862_28888831_1	chr6	+	3159	23	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	32515	0	32434	0	3prime_fragment	FALSE	canonical	3	582	junction_2	55.8626007744829	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGGAGCCAGAACACTG	NA	False	NA	30	True	AATAAA	-31	NA	28512861	28888831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ENSMUSG00000001435.16_76888850_76894595_1	chr10	-	1051	6	ISM	ENSMUSG00000001435.16	ENSMUST00000105409.8	4791	41	54944	0	1236	0	3prime_fragment	FALSE	canonical	3	400	junction_1	12.0764233115604	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGACTTCCTGCCCTTCCTC	NA	False	NA	4	True	AATAAA	-39	NA	76894595	76888849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532
ENSMUSG00000001435.16_76916559_77002382_1	chr10	-	1214	8	ISM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	0	28547	0	0	5prime_fragment	FALSE	canonical	3	324	junction_4	21.6361375707309	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCCACCAGGGAAGGATG	5935	False	NA	NA	False	NA	NA	NA	77002382	76916558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ENSMUSG00000001436.16_76869102_76885882_3	chr10	+	1908	6	FSM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	56	383	0	-383	multi-exon	FALSE	canonical	0	0	junction_2	40.1875602643405	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTACTTCATGCTTTAGC	NA	False	NA	NA	False	NA	NA	NA	76869101	76885882	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_76869182_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
ENSMUSG00000001436.16_76869153_76886265_1	chr10	+	2343	6	NIC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	44.1832547465666	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTGTTGTGAGACAC	NA	False	NA	16	True	ATTAAA	-18	NA	76869152	76886265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_76869285_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
ENSMUSG00000001440.6_97072511_97078766_1	chr11	-	778	4	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-59	21971	-59	-17464	5prime_fragment	FALSE	canonical	3	682	junction_3	62.579726926715	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCACAGAGCATATGAAAGA	NA	False	NA	NA	False	NA	NA	NA	97078766	97072510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_97072652_97075752_97075936_97078214_97078274_97078371
ENSMUSG00000001445.11_96932421_96939208_1	chr11	+	842	5	FSM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	35	831	0	-136	multi-exon	FALSE	canonical	3	440	junction_1	35.8643276808586	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTCGTTGTCTGGC	908	False	NA	NA	False	CATAAA	-17	NA	96932420	96939208	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_96932479_96935353_96935524_96937855_96938021_96938238_96938384_96938904
ENSMUSG00000001445.11_96932421_96939815_1	chr11	+	1449	5	FSM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	35	224	0	-224	multi-exon	FALSE	canonical	3	440	junction_1	35.8643276808586	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTTTTAAGAATTATT	908	False	NA	18	True	AATAAA	-19	NA	96932420	96939815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_96932479_96935353_96935524_96937855_96938021_96938238_96938384_96938904
ENSMUSG00000001445.11_96932421_96939815_2	chr11	+	1279	4	NIC	ENSMUSG00000001445.11	novel	1708	5	NA	NA	0	-224	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	229.382262222305	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTTTTAAGAATTATT	908	False	NA	18	True	AATAAA	-19	NA	96932420	96939815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_96932479_96937855_96938021_96938238_96938384_96938904
ENSMUSG00000001445.11_96932421_96940039_1	chr11	+	1503	4	NIC	ENSMUSG00000001445.11	novel	1708	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	229.382262222305	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTATGTTTATATCTGTA	908	False	NA	10	True	NA	NA	NA	96932420	96940039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_96932479_96937855_96938021_96938238_96938384_96938904
ENSMUSG00000001467.6_4131145_4154435_1	chr5	-	3620	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	311	0	-14	0	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGATTTTCTTTGCCAAT	NA	False	NA	-22	True	ATTAAA	-22	NA	4154435	4131144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ENSMUSG00000001467.6_4132114_4154435_1	chr5	-	2651	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	311	969	-14	-969	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTACTGGCTGGTCT	NA	False	NA	-2	True	NA	NA	NA	4154435	4132113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ENSMUSG00000001467.6_4132538_4154435_1	chr5	-	2227	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	311	1393	-14	742	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACTGGTCCCAAATGGT	NA	False	NA	-13	True	AATAAA	-21	NA	4154435	4132537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ENSMUSG00000001472.18_124100562_124128070_1	chr8	+	2178	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	-1	561	0	100	multi-exon	FALSE	canonical	3	157	junction_17	92.4052680533628	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCGTGTCTTTTGTTTT	NA	False	NA	23	True	NA	NA	NA	124100561	124128070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
ENSMUSG00000001472.18_124100562_124128070_2	chr8	+	2196	18	NIC	ENSMUSG00000001472.18	novel	2582	18	NA	NA	0	100	combination_of_known_junctions	FALSE	canonical	2	14	junction_17	123.528291311445	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCGTGTCTTTTGTTTT	NA	False	NA	23	True	NA	NA	NA	124100561	124128070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127796
ENSMUSG00000001472.18_124100562_124130142_1	chr8	+	2179	18	FSM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	0	403	0	0	multi-exon	FALSE	canonical	3	124	junction_17	99.4416940675849	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGGATCATCATCGGG	NA	False	NA	9	True	AATAAA	-17	NA	124100561	124130142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
ENSMUSG00000001473.8_67523787_67535819_1	chr18	+	1753	4	NNC	ENSMUSG00000001473.8	novel	1758	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	315.835400169139	2088	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGGTCTCTTGAACTTC	NA	False	NA	12	True	AATAAA	-14	NA	67523786	67535819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_67523885_67524394_67524504_67526015_67526127_67534384
ENSMUSG00000001482.16_124169725_124189890_1	chr8	+	3008	12	FSM	ENSMUSG00000001482.16	ENSMUST00000065534.10	3127	12	0	119	0	-111	multi-exon	FALSE	canonical	3	130	junction_1	53.2429330273546	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATCTGTGTGTTTCCTGC	NA	False	NA	-88	True	NA	NA	NA	124169724	124189890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124169791_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ENSMUSG00000001482.16_124173812_124190009_1	chr8	+	3142	12	NIC	ENSMUSG00000001482.16	novel	589	4	NA	NA	-109	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	80.3485177058087	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124173811	124190009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_124173893_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ENSMUSG00000001506.11_94840870_94842723_1	chr11	+	1303	5	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	13820	1145	4676	-1145	3prime_fragment	FALSE	canonical	2	4	junction_1	14.6180539060437	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTCCTCTTGCTTGAA	NA	False	NA	NA	False	AAAAAG	-4	NA	94840869	94842723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_94841031_94841116_94841400_94841534_94841726_94841926_94842170_94842298
ENSMUSG00000001518.13_128386496_128401884_1	chr6	-	2221	12	FSM	ENSMUSG00000001518.13	ENSMUST00000001559.11	2320	12	10	89	-3	0	multi-exon	FALSE	canonical	3	237	junction_3	19.6628609101919	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAAGGCTCCATAGCAAG	NA	False	NA	-89	True	NA	NA	NA	128401884	128386495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ENSMUSG00000001518.13_128387221_128401884_1	chr6	-	1496	12	FSM	ENSMUSG00000001518.13	ENSMUST00000001559.11	2320	12	10	814	-3	0	multi-exon	FALSE	canonical	3	237	junction_3	19.6628609101919	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGATCCATGACCTTGGA	NA	False	NA	NA	False	NA	NA	NA	128401884	128387220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ENSMUSG00000001520.13_128386407_128401884_1	chr6	+	2141	11	Genic_Genomic	ENSMUSG00000001520.13	novel	572	6	NA	NA	9151	8494	multi-exon	FALSE	non_canonical	0	0	junction_1	0	421	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAAGCCTTGAGTTCCGG	NA	False	NA	NA	False	NA	NA	NA	128386406	128401884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128393219_128393262_128394579_128394676_128401680
ENSMUSG00000001521.13_128299971_128332778_1	chr6	-	1491	11	FSM	ENSMUSG00000001521.13	ENSMUST00000001562.9	3374	11	36	1847	0	0	multi-exon	FALSE	canonical	3	32	junction_5	4.7169905660283	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCCTGCCCCTGCCCC	7527	False	NA	NA	False	NA	NA	NA	128332778	128299970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_128300176_128300960_128301133_128301942_128302042_128302839_128302955_128303734_128303848_128304502_128304701_128304918_128305041_128310795_128310973_128311400_128311561_128314696_128314749_128332700
ENSMUSG00000001525.11_36145697_36149124_1	chr17	-	1686	4	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	800	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4503.49930609521	37555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTTTCTCTTTCCAC	NA	False	NA	-32	True	NA	NA	NA	36149124	36145696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_36146927_36147054_36147166_36147519_36147629_36148888
ENSMUSG00000001525.11_36145697_36149124_2	chr17	-	1691	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	74	884	-15	800	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	37602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTTTCTCTTTCCAC	NA	False	NA	-32	True	NA	NA	NA	36149124	36145696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
ENSMUSG00000001542.8_75855830_75919137_1	chr13	+	2082	12	FSM	ENSMUSG00000001542.8	ENSMUST00000001583.8	4382	12	954	1346	0	323	multi-exon	FALSE	canonical	3	343	junction_2	37.9194448472108	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTGTTAATAGAAGCAA	6406	False	NA	NA	False	NA	NA	NA	75855829	75919137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ENSMUSG00000001552.15_100261445_100267968_1	chr11	-	1730	6	ISM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	20607	0	-3017	0	3prime_fragment	FALSE	canonical	3	472	junction_4	54.0014814611599	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	6771	False	NA	-17	True	AATAAA	-18	NA	100267968	100261444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548
ENSMUSG00000001552.15_100261445_100277567_1	chr11	-	3337	14	NIC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	142.103221088711	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	-17	True	AATAAA	-18	NA	100277567	100261444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100277321
ENSMUSG00000001569.11_29639662_29656474_1	chr5	+	2852	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	0	6367	0	5121	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATGGTGGCACGTGTCT	2959	False	NA	5	True	TTTAAA	-7	NA	29639661	29656474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ENSMUSG00000001576.16_26780519_26874326_1	chr17	+	1119	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	56	1579	0	0	multi-exon	FALSE	canonical	3	380	junction_9	34.0783411176855	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCACGTGTCTCTTTCCCTG	NA	False	NA	14	True	GATAAA	-16	NA	26780518	26874326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ENSMUSG00000001583.14_69737443_69741862_1	chr11	-	1763	8	NIC	ENSMUSG00000001583.14	novel	2778	14	NA	NA	4566	4388	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCACCCCCGGGTCGCC	NA	False	NA	NA	False	GGGGCT	-32	NA	69741862	69737442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ENSMUSG00000001583.14_69737443_69741862_2	chr11	-	1979	7	NIC	ENSMUSG00000001583.14	novel	2778	14	NA	NA	4566	4388	intron_retention	FALSE	non_canonical	0	0	junction_1	0	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCACCCCCGGGTCGCC	NA	False	NA	NA	False	GGGGCT	-32	NA	69741862	69737442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ENSMUSG00000001604.15_135975263_136002214_1	chr4	+	1299	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	307.780457469281	1974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGCCCTGGATGAGGC	6603	False	NA	20	True	AATAAA	-31	NA	135975262	136002214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_135975471_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000954_136001027_136002090
ENSMUSG00000001604.15_135975263_136002214_2	chr4	+	1249	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	231.929816970565	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGCCCTGGATGAGGC	6603	False	NA	20	True	AATAAA	-31	NA	135975262	136002214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992245_135995331_135995475_135998543_135998691_136000954_136001027_136002090
ENSMUSG00000001604.15_135975263_136002214_3	chr4	+	1329	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	302.350392756484	2194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGCCCTGGATGAGGC	6603	False	NA	20	True	AATAAA	-31	NA	135975262	136002214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_135975429_135981056_135981120_135981775_135981954_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000954_136001027_136002090
ENSMUSG00000001604.15_135975284_136002214_1	chr4	+	1230	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	231.929816970565	2872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGCCCTGGATGAGGC	6624	False	NA	20	True	AATAAA	-31	NA	135975283	136002214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992231_135995315_135995475_135998543_135998691_136000954_136001027_136002090
ENSMUSG00000001630.14_146626493_146678054_1	chr6	+	2294	14	FSM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	0	2256	0	0	multi-exon	FALSE	canonical	3	136	junction_10	10.7620855417108	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGATCAGTCAATGGAC	NA	False	NA	11	True	ATTAAA	-21	NA	146626492	146678054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ENSMUSG00000001642.19_34280869_34294378_1	chr6	-	1421	11	NIC	ENSMUSG00000001642.19	novel	1387	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_10	401.524955637878	6691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGTGGTCCGTTTTG	NA	False	NA	-5	True	AATAAA	-16	NA	34294378	34280868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34293515_34293585_34294274
ENSMUSG00000001666.9_75607064_75609263_1	chr10	-	677	3	NNC	ENSMUSG00000001666.9	novel	649	3	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	232.5	3883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTCTTTGCTTCTGT	NA	False	NA	-4	True	AATAAA	-21	NA	75609263	75607063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_75607341_75608571_75608748_75609039
ENSMUSG00000001674.12_121481564_121483049_1	chr1	-	409	2	ISM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	12669	0	3895	0	3prime_fragment	FALSE	canonical	3	718	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTATACCTTTCCCT	NA	False	NA	-16	True	CATAAA	-23	NA	121483049	121481563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_121481868_121482944
ENSMUSG00000001674.12_121481564_121495718_1	chr1	-	2251	13	NNC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	225.520308890845	2252	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTATACCTTTCCCT	NA	False	NA	-16	True	CATAAA	-23	NA	121495718	121481563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121487994_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ENSMUSG00000001674.12_121481564_121495718_2	chr1	-	2256	13	NNC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	225.732634375764	2253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTATACCTTTCCCT	NA	False	NA	-16	True	CATAAA	-23	NA	121495718	121481563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486287_121486890_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ENSMUSG00000001687.16_148441445_148489281_1	chr5	-	2240	6	FSM	ENSMUSG00000001687.16	ENSMUST00000201595.4	2064	6	318	-494	191	0	multi-exon	FALSE	canonical	3	120	junction_5	118.120954957196	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTTTGTTGATGATTT	99	False	NA	-4	True	AATAAA	-21	NA	148489281	148441444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762_148488861_148488966
ENSMUSG00000001687.16_148441445_148489281_2	chr5	-	2346	5	FSM	ENSMUSG00000001687.16	ENSMUST00000079324.14	2537	5	191	0	191	0	multi-exon	FALSE	canonical	3	361	junction_2	34.1641259217911	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTTTGTTGATGATTT	99	False	NA	-4	True	AATAAA	-21	NA	148489281	148441444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762
ENSMUSG00000001707.9_38829665_38842986_1	chr13	-	1023	4	FSM	ENSMUSG00000001707.9	ENSMUST00000001757.9	2553	4	48	1482	0	-1482	multi-exon	FALSE	canonical	3	1400	junction_3	42.6640624205223	6693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTGTTATCTTTCC	NA	False	NA	-1	True	AGTAAA	-19	NA	38842986	38829664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_38830287_38838971_38839068_38840015_38840217_38842882
ENSMUSG00000001707.9_38829839_38842986_1	chr13	-	849	4	FSM	ENSMUSG00000001707.9	ENSMUST00000001757.9	2553	4	48	1656	0	-1656	multi-exon	FALSE	canonical	3	1400	junction_3	42.6640624205223	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGCTGTTTACTTTTT	NA	False	NA	NA	False	AAAAAG	-16	NA	38842986	38829838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_38830287_38838971_38839068_38840015_38840217_38842882
ENSMUSG00000001755.13_100973444_100977445_1	chr11	+	1377	9	NIC	ENSMUSG00000001755.13	novel	2138	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	48.4418143239908	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3564	False	NA	25	True	ATTAAA	-16	NA	100973443	100977445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_100973517_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ENSMUSG00000001774.9_18203596_18225297_1	chr9	+	2168	11	NNC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	0	1988	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	283.304006325361	1709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTCATGTGTTT	8540	False	NA	12	True	NA	NA	NA	18203595	18225297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215583_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ENSMUSG00000001774.9_18203596_18225297_2	chr9	+	2173	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	175	3441	0	1988	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTCATGTGTTT	8540	False	NA	12	True	NA	NA	NA	18203595	18225297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ENSMUSG00000001783.4_85774501_85793687_1	chr10	-	2002	12	NNC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	411.931110344219	3483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTCTCTTCCTGTG	NA	False	NA	-12	True	ATTAAA	-17	NA	85793687	85774500	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582_85791655_85793478
ENSMUSG00000001785.14_85707748_85724220_1	chr10	+	1779	15	FSM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	53	740	0	-740	multi-exon	FALSE	canonical	3	284	junction_1	18.5957258639765	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTAACAGGCCATCTGA	NA	False	NA	12	True	TATAAA	-16	NA	85707747	85724220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
ENSMUSG00000001785.14_85707748_85724797_1	chr10	+	2356	15	FSM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	53	163	0	-163	multi-exon	FALSE	canonical	3	284	junction_1	18.5957258639765	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCTGGACTTAAGAGGT	NA	False	NA	NA	False	AATAAA	-24	NA	85707747	85724797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
ENSMUSG00000001786.15_85857836_85884188_1	chr10	+	1839	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	0	3549	0	1	multi-exon	TRUE	canonical	3	208	junction_3	24.7878498462452	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGACTTGACTTTTTTT	NA	False	NA	11	True	AGTAAA	-14	NA	85857835	85884188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ENSMUSG00000001786.15_85857836_85884188_2	chr10	+	1687	9	NIC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	77.6434156899347	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGACTTGACTTTTTTT	NA	False	NA	11	True	AGTAAA	-14	NA	85857835	85884188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_85858009_85860431_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ENSMUSG00000001786.15_85857836_85884188_3	chr10	+	1832	9	NNC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	84.7997641506154	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGACTTGACTTTTTTT	NA	False	NA	11	True	AGTAAA	-14	NA	85857835	85884188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878792_85878882_85880286_85880464_85882636_85882675_85883585
ENSMUSG00000001786.15_85857985_85884188_2	chr10	+	1690	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	149	3549	-68	1	multi-exon	FALSE	canonical	3	208	junction_3	24.7878498462452	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGACTTGACTTTTTTT	NA	False	NA	11	True	AGTAAA	-14	NA	85857984	85884188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ENSMUSG00000001794.14_29886361_29892531_1	chr7	-	1375	9	FSM	ENSMUSG00000001794.14	ENSMUST00000207082.2	1241	9	-134	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_7	82.1492544092763	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGTTATTTTTTTAAT	NA	False	NA	-2	True	NA	NA	NA	29892531	29886360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291
ENSMUSG00000001794.14_29886361_29894483_1	chr7	-	1429	10	NNC	ENSMUSG00000001794.14	novel	1429	11	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	539.637281015432	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGTTATTTTTTTAAT	NA	False	NA	-2	True	NA	NA	NA	29894483	29886360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892035_29893302_29893527_29894430
ENSMUSG00000001794.14_29886415_29893225_1	chr7	-	1669	10	FSM	ENSMUSG00000001794.14	ENSMUST00000129761.8	1157	10	-19	-493	-19	0	multi-exon	FALSE	canonical	3	18	junction_9	497.427331996628	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGACTCTGAGTGCTGA	NA	False	NA	-28	True	AATAAA	-21	NA	29893225	29886414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29892671
ENSMUSG00000001827.13_101507538_101517687_1	chr7	-	822	4	NIC	ENSMUSG00000001827.13	novel	1286	7	NA	NA	187	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	150.415720218629	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGTGTGAATGAGAATG	3763	False	NA	0	True	AATAAA	-31	NA	101517687	101507537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_101507952_101508303_101508440_101508572_101508762_101517604
ENSMUSG00000001827.13_101507538_101518225_1	chr7	-	1089	6	NIC	ENSMUSG00000001827.13	novel	1286	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	123.544971569061	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGTGTGAATGAGAATG	3225	False	NA	0	True	AATAAA	-31	NA	101518225	101507537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604_101517759_101518199
ENSMUSG00000001829.18_101312840_101437021_1	chr7	+	2273	16	FSM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	0	2354	0	4	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACCTTGCCCTCATGCCT	NA	False	NA	-18	True	AATAAA	-28	NA	101312839	101437021	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001829.18_101312964_101437021_1	chr7	+	2149	16	FSM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	124	2354	0	4	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACCTTGCCCTCATGCCT	NA	False	NA	-18	True	AATAAA	-28	NA	101312963	101437021	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001833.18_25163747_25219862_1	chr9	+	2511	13	NIC	ENSMUSG00000001833.18	novel	2516	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	380.283474310064	2484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCAGTGTCTTGTAT	NA	False	NA	17	True	AATAAA	-17	NA	25163746	25219862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ENSMUSG00000001833.18_25163944_25219202_1	chr9	+	1654	13	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	0	387	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	380.283474310064	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGAGGATAAATTGCC	NA	False	NA	NA	False	AATAAA	-17	NA	25163943	25219202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ENSMUSG00000001833.18_25163944_25219862_1	chr9	+	314	4	NNC	ENSMUSG00000001833.18	novel	2516	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	650.538238691624	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCAGTGTCTTGTAT	NA	False	NA	17	True	AATAAA	-17	NA	25163943	25219862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_25163996_25176689_25176793_25188839_25188941_25219804
ENSMUSG00000001833.18_25163944_25219862_2	chr9	+	2314	13	NIC	ENSMUSG00000001833.18	novel	2516	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	380.283474310064	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCAGTGTCTTGTAT	NA	False	NA	17	True	AATAAA	-17	NA	25163943	25219862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ENSMUSG00000001844.11_143302245_143314978_1	chr5	-	1494	9	NNC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	111.939087788851	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5302	False	NA	-14	True	AATACA	-25	NA	143314978	143302244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314201_143314326_143314432_143314653_143314920
ENSMUSG00000001844.11_143302245_143314978_2	chr5	-	1412	8	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_6	91.0541440180355	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5302	False	NA	-14	True	AATACA	-25	NA	143314978	143302244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143312061_143314145_143314326_143314920
ENSMUSG00000001844.11_143302245_143314978_3	chr5	-	1418	8	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	86.0744812736656	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5302	False	NA	-14	True	AATACA	-25	NA	143314978	143302244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310154_143310639_143310714_143311853_143311979_143314145_143314326_143314920
ENSMUSG00000001844.11_143302245_143314978_4	chr5	-	1224	9	NNC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	80.9582261107542	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5302	False	NA	-14	True	AATACA	-25	NA	143314978	143302244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_143302588_143305985_143306046_143306151_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
ENSMUSG00000001844.11_143302245_143314978_5	chr5	-	1397	8	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	84.1580146425249	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5302	False	NA	-14	True	AATACA	-25	NA	143314978	143302244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314853
ENSMUSG00000001844.11_143302245_143314978_6	chr5	-	1274	8	NNC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	87.5293536769354	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5302	False	NA	-14	True	AATACA	-25	NA	143314978	143302244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314201_143314326_143314920
ENSMUSG00000001847.15_143492518_143513581_1	chr5	-	820	6	FSM	ENSMUSG00000001847.15	ENSMUST00000080537.14	4159	6	210	3129	167	297	multi-exon	FALSE	canonical	3	1143	junction_4	56.2444663944819	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCCTTCTTAAAGCCTT	3633	False	NA	-1	True	ATTAAA	-18	NA	143513581	143492517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423_143500542_143502912_143502985_143513517
ENSMUSG00000001891.17_21271138_21321219_1	chr11	-	2597	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-18	-535	-18	0	multi-exon	TRUE	canonical	3	305	junction_7	61.1714853284106	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTTTAAGTCTGTTT	NA	False	NA	NA	False	AATATA	-18	NA	21321219	21271137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
ENSMUSG00000001891.17_21271673_21286702_1	chr11	-	1772	8	NNC	ENSMUSG00000001891.17	novel	2044	10	NA	NA	-6810	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_7	143.823020495642	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTGTCTAGTGCTCA	NA	False	NA	-7	True	AATAAA	-21	NA	21286702	21271672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21286551
ENSMUSG00000001891.17_21271940_21321219_1	chr11	-	1795	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-18	267	-18	0	multi-exon	FALSE	canonical	3	305	junction_7	61.1714853284106	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGTACTTTATTTACT	NA	False	NA	-41	True	AATAAA	-23	NA	21321219	21271939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
ENSMUSG00000001909.17_85397108_85413756_1	chr8	+	4196	6	NIC	ENSMUSG00000001909.17	novel	502	2	NA	NA	-15828	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAATCCGCCCCCACTC	NA	False	NA	NA	False	NA	NA	NA	85397107	85413756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413676
ENSMUSG00000001909.17_85399220_85413756_1	chr8	+	2084	6	NIC	ENSMUSG00000001909.17	novel	502	2	NA	NA	-13716	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAATCCGCCCCCACTC	NA	False	NA	NA	False	NA	NA	NA	85399219	85413756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413676
ENSMUSG00000001909.17_85415915_85426415_1	chr8	+	2125	17	FSM	ENSMUSG00000001909.17	ENSMUST00000001974.11	2567	17	420	22	0	0	multi-exon	FALSE	canonical	3	179	junction_1	103.16006979447	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415914	85426415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUSG00000001909.17_85415915_85426415_2	chr8	+	2049	17	NIC	ENSMUSG00000001909.17	novel	2044	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	113.375964714749	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415914	85426415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_85416006_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUSG00000001909.17_85415915_85426415_3	chr8	+	2363	16	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	179	junction_1	102.688395968905	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415914	85426415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUSG00000001909.17_85415915_85426415_4	chr8	+	2134	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	156.933704155608	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415914	85426415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_85416006_85416260_85416538_85417145_85417202_85417430_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUSG00000001909.17_85416106_85426415_1	chr8	+	2189	16	ISM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	213	0	0	0	3prime_fragment	FALSE	canonical	3	403	junction_2	59.8663697097312	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85416105	85426415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUSG00000001918.18_16518856_16532199_1	chr7	+	1725	9	NNC	ENSMUSG00000001918.18	novel	853	3	NA	NA	193	0	at_least_one_novel_splicesite	FALSE	canonical	2	41	junction_1	534.082800228579	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTTGTCACATGTCT	NA	False	NA	73	True	NA	NA	NA	16518855	16532199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_16518953_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ENSMUSG00000001924.16_20524660_20548775_1	chrX	+	3306	26	FSM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	95	643	0	331	multi-exon	TRUE	canonical	3	1167	junction_1	494.469940036804	2612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCTCCCTCCTCAGATC	NA	False	NA	NA	False	NA	NA	NA	20524659	20548775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ENSMUSG00000001924.16_20524660_20548943_1	chrX	+	3474	26	FSM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	95	475	0	-475	multi-exon	FALSE	canonical	3	1167	junction_1	494.469940036804	7657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20524659	20548943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ENSMUSG00000001924.16_20529137_20548775_1	chrX	+	3428	26	FSM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	0	643	0	331	multi-exon	FALSE	canonical	3	2172	junction_1	357.223416925598	3748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCTCCCTCCTCAGATC	NA	False	NA	NA	False	NA	NA	NA	20529136	20548775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ENSMUSG00000001924.16_20529137_20548943_1	chrX	+	3596	26	FSM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	0	475	0	-475	multi-exon	FALSE	canonical	3	2172	junction_1	357.223416925598	8445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529136	20548943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ENSMUSG00000001942.9_37560478_37568533_1	chr9	+	1490	9	NIC	ENSMUSG00000001942.9	novel	4947	10	NA	NA	6502	7582	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	6123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGACCCGCCGGAAGT	4779	False	NA	NA	False	NA	NA	NA	37560477	37568533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511_37565733_37566317_37566389_37568293
ENSMUSG00000001962.9_73356639_73363740_1	chrX	+	1362	13	NNC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	238.861187024319	3223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGTGCCTGCATTATA	199	False	NA	NA	False	AATAAA	-18	NA	73356638	73363740	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361753_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ENSMUSG00000001962.9_73356639_73363740_2	chrX	+	1360	13	NNC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	237.306178221769	3223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGTGCCTGCATTATA	199	False	NA	NA	False	AATAAA	-18	NA	73356638	73363740	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_73356932_73358282_73358368_73358469_73358570_73359040_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ENSMUSG00000001962.9_73356639_73363740_3	chrX	+	1362	13	NNC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	239.093891366737	3196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGTGCCTGCATTATA	199	False	NA	NA	False	AATAAA	-18	NA	73356638	73363740	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361248_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ENSMUSG00000001964.15_73298422_73301353_1	chrX	+	1326	6	FSM	ENSMUSG00000001964.15	ENSMUST00000002029.13	1595	6	129	140	0	-140	multi-exon	FALSE	canonical	3	248	junction_2	18.1592951405059	3889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTGATTCTTCCTACT	NA	False	NA	20	True	AATAAA	-15	NA	73298421	73301353	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73300612
ENSMUSG00000001983.8_105956887_105965651_1	chr11	+	2596	5	FSM	ENSMUSG00000001983.8	ENSMUST00000002048.8	1383	5	0	-1213	0	1213	multi-exon	FALSE	canonical	3	51	junction_3	5.93717104351896	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGAGGCTTACCAGTGAT	874	False	NA	NA	False	NA	NA	NA	105956886	105965651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_105957345_105960331_105960439_105962692_105962821_105963356_105963535_105963926
ENSMUSG00000001999.16_126912613_126932693_1	chr2	+	1029	6	NNC	ENSMUSG00000001999.16	novel	657	6	NA	NA	0	424	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	79.0103790650317	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGTCGATTTTGAT	2237	False	NA	NA	False	NA	NA	NA	126912612	126932693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_126912646_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126932163
ENSMUSG00000001999.16_126912613_126932693_2	chr2	+	1034	6	NIC	ENSMUSG00000001999.16	novel	657	6	NA	NA	0	424	combination_of_known_junctions	FALSE	canonical	3	37	junction_5	66.545022353291	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGTCGATTTTGAT	2237	False	NA	NA	False	NA	NA	NA	126912612	126932693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126932163
ENSMUSG00000001999.16_126912613_126939004_1	chr2	+	1129	8	NNC	ENSMUSG00000001999.16	novel	1160	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	61.7962418776747	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAATAGTGTTGATGACT	2237	False	NA	NA	False	AATAAA	-20	NA	126912612	126939004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_126912646_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
ENSMUSG00000002010.18_72822569_72830228_1	chrX	-	1291	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	210	junction_11	355.941284971423	4729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830228	72822568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830133
ENSMUSG00000002010.18_72822569_72830503_1	chrX	-	1319	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1072	junction_10	144.485579365652	6435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
ENSMUSG00000002010.18_72822569_72830503_2	chrX	-	1509	11	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1072	junction_9	145.935054048025	6053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
ENSMUSG00000002010.18_72822569_72830503_3	chrX	-	2348	9	NIC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1120	junction_6	124.053415914275	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830380
ENSMUSG00000002012.14_72699601_72703723_1	chrX	-	1462	11	NIC	ENSMUSG00000002012.14	novel	1532	12	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	2	5	junction_10	21.6148097377701	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTGGTGCTGAACTGG	NA	False	NA	-3	True	AATAAA	-14	NA	72703723	72699600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72703624
ENSMUSG00000002014.13_72830634_72834432_1	chrX	+	901	7	NNC	ENSMUSG00000002014.13	novel	800	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_2	575.300621897418	6834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	5432	False	NA	48	True	AATAAA	-30	NA	72830633	72834432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_72830913_72832440_72832560_72832660_72832760_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ENSMUSG00000002014.13_72830634_72834432_2	chrX	+	1028	5	ISM	ENSMUSG00000002014.13	ENSMUST00000002090.3	765	6	-34	0	0	0	intron_retention	FALSE	canonical	3	426	junction_1	493.487081897794	2011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	5432	False	NA	48	True	AATAAA	-30	NA	72830633	72834432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_72830913_72832443_72832560_72833405_72833481_72833636_72833727_72833964
ENSMUSG00000002014.13_72830668_72834432_1	chrX	+	1388	3	FSM	ENSMUSG00000002014.13	ENSMUST00000142829.2	522	3	-203	-663	0	0	multi-exon	FALSE	canonical	3	426	junction_1	615	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	5466	False	NA	48	True	AATAAA	-30	NA	72830667	72834432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72830913_72832443_72832560_72833405
ENSMUSG00000002014.13_72830668_72834432_2	chrX	+	994	5	ISM	ENSMUSG00000002014.13	ENSMUST00000002090.3	765	6	0	0	0	0	intron_retention	FALSE	canonical	3	426	junction_1	493.487081897794	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	5466	False	NA	48	True	AATAAA	-30	NA	72830667	72834432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_72830913_72832443_72832560_72833405_72833481_72833636_72833727_72833964
ENSMUSG00000002014.13_72830668_72834432_3	chrX	+	867	7	NNC	ENSMUSG00000002014.13	novel	765	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_2	575.300621897418	5289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	5466	False	NA	48	True	AATAAA	-30	NA	72830667	72834432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_72830913_72832440_72832560_72832660_72832760_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ENSMUSG00000002014.13_72830830_72834432_1	chrX	+	603	6	FSM	ENSMUSG00000002014.13	ENSMUST00000002090.3	765	6	162	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	441.755135793575	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	5628	False	NA	48	True	AATAAA	-30	NA	72830829	72834432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72830913_72832443_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ENSMUSG00000002015.6_72729784_72759781_1	chrX	-	1211	8	NNC	ENSMUSG00000002015.6	novel	1219	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1020.94741914217	8062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTGTGTCTAACTGAG	NA	False	NA	-13	True	AATAAA	-17	NA	72759781	72729783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_72730202_72731442_72731536_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
ENSMUSG00000002015.6_72729784_72759818_1	chrX	-	1208	8	NNC	ENSMUSG00000002015.6	novel	1219	8	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	1017.04273182957	8035	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTGTGTCTAACTGAG	NA	False	NA	-13	True	AATAAA	-17	NA	72759818	72729783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759771
ENSMUSG00000002015.6_72729989_72759781_1	chrX	-	1014	8	FSM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	0	205	0	-205	multi-exon	FALSE	canonical	3	2403	junction_7	231.225131040053	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACCTGATTGTTGTTTAT	NA	False	NA	-3	True	NA	NA	NA	72759781	72729988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
ENSMUSG00000002031.14_44684257_44702190_1	chr9	+	1559	12	NNC	ENSMUSG00000002031.14	novel	4169	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	56.3621700689038	850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCTGGCTCATTAGTG	NA	False	NA	8	True	AATACA	-17	NA	44684256	44702190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_44684471_44684984_44685082_44689858_44689936_44693402_44693531_44695027_44695103_44695256_44695351_44695628_44695758_44697590_44697713_44698134_44698202_44700863_44700925_44701187_44701274_44701781
ENSMUSG00000002031.14_44684306_44702190_1	chr9	+	1516	12	FSM	ENSMUSG00000002031.14	ENSMUST00000238800.2	1059	12	-144	-313	0	2	multi-exon	FALSE	canonical	3	173	junction_2	11.1058022211458	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCTGGCTCATTAGTG	NA	False	NA	8	True	AATACA	-17	NA	44684305	44702190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44684471_44684984_44685082_44689858_44689936_44693396_44693531_44695027_44695103_44695256_44695351_44695628_44695758_44697590_44697713_44698134_44698202_44700863_44700925_44701187_44701274_44701781
ENSMUSG00000002031.14_44684450_44702190_1	chr9	+	1372	12	FSM	ENSMUSG00000002031.14	ENSMUST00000238800.2	1059	12	0	-313	0	2	multi-exon	FALSE	canonical	3	173	junction_2	11.1058022211458	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCTGGCTCATTAGTG	NA	False	NA	8	True	AATACA	-17	NA	44684449	44702190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44684471_44684984_44685082_44689858_44689936_44693396_44693531_44695027_44695103_44695256_44695351_44695628_44695758_44697590_44697713_44698134_44698202_44700863_44700925_44701187_44701274_44701781
ENSMUSG00000002033.15_44881050_44891729_1	chr9	-	843	7	FSM	ENSMUSG00000002033.15	ENSMUST00000002101.12	1023	7	0	180	0	0	multi-exon	FALSE	canonical	2	5	junction_5	2.73353657780945	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGTGGTATGACTCAG	NA	False	NA	NA	False	AATAAA	-15	NA	44891729	44881049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_44881216_44881988_44882072_44882560_44882605_44884803_44884936_44885460_44885689_44886544_44886569_44891563
ENSMUSG00000002043.18_19242655_19250070_1	chr7	+	1234	5	NIC	ENSMUSG00000002043.18	novel	785	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	436	junction_1	68.656299783778	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCAGTGCTTATCACA	525	False	NA	21	True	AGTAAA	-22	NA	19242654	19250070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_19242758_19248125_19248194_19248346_19249016_19249128_19249223_19249770
ENSMUSG00000002043.18_19242655_19250070_2	chr7	+	761	6	NNC	ENSMUSG00000002043.18	novel	785	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	217.312677955061	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCAGTGCTTATCACA	525	False	NA	21	True	AGTAAA	-22	NA	19242654	19250070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_19242758_19248131_19248194_19248346_19248465_19248931_19249016_19249128_19249223_19249770
ENSMUSG00000002043.18_19242655_19250070_3	chr7	+	749	6	NIC	ENSMUSG00000002043.18	novel	785	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	193.692126840509	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCAGTGCTTATCACA	525	False	NA	21	True	AGTAAA	-22	NA	19242654	19250070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_19242758_19248125_19248194_19248346_19248465_19248949_19249016_19249128_19249223_19249770
ENSMUSG00000002059.19_78079266_78083014_1	chr11	+	1145	10	FSM	ENSMUSG00000002059.19	ENSMUST00000150941.8	795	10	0	-350	0	0	multi-exon	FALSE	canonical	2	3	junction_1	46.6883547486501	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTTTCTTTAAAG	6035	False	NA	21	True	ATTAAA	-15	NA	78079265	78083014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78079338_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
ENSMUSG00000002064.11_78136817_78146322_1	chr11	+	945	4	NNC	ENSMUSG00000002064.11	novel	1268	3	NA	NA	245	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	99.5199589138893	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTCATTTATTAAG	NA	False	NA	19	True	NA	NA	NA	78136816	78146322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_78136997_78141841_78142039_78145676_78145738_78145815
ENSMUSG00000002064.11_78136817_78146322_2	chr11	+	1023	3	FSM	ENSMUSG00000002064.11	ENSMUST00000002133.9	1268	3	245	0	245	0	multi-exon	FALSE	canonical	3	217	junction_1	4	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTCATTTATTAAG	NA	False	NA	19	True	NA	NA	NA	78136816	78146322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78136997_78141841_78142039_78145676
ENSMUSG00000002064.11_78138840_78146322_1	chr11	+	950	3	NNC	ENSMUSG00000002064.11	novel	586	2	NA	NA	2268	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	108.5	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTCATTTATTAAG	NA	False	NA	19	True	NA	NA	NA	78138839	78146322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_78138947_78141841_78142039_78145676
ENSMUSG00000002064.11_78138840_78146322_2	chr11	+	987	3	NNC	ENSMUSG00000002064.11	novel	586	2	NA	NA	2268	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	104	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTCATTTATTAAG	NA	False	NA	19	True	NA	NA	NA	78138839	78146322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_78138984_78141841_78142039_78145676
ENSMUSG00000002068.17_37797409_37806783_1	chr7	-	1824	12	FSM	ENSMUSG00000002068.17	ENSMUST00000108023.10	2000	12	176	0	144	0	multi-exon	FALSE	canonical	2	563	junction_4	98.4049652714874	429	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTCTTAACTCTGT	NA	False	NA	-12	True	AATAAA	-19	NA	37806783	37797408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
ENSMUSG00000002076.13_32164894_32253494_1	chr17	-	1704	9	NNC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-12	162	at_least_one_novel_splicesite	FALSE	non_canonical	3	53	junction_1	394.529129944799	2771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTGCCTGCACTCATG	NA	False	NA	-17	True	ATTAAA	-17	NA	32253494	32164893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_32164934_32164957_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
ENSMUSG00000002076.13_32165056_32253494_1	chr17	-	1634	7	NNC	ENSMUSG00000002076.13	novel	1479	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_6	475.574973643016	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	-13	True	AATAAA	-30	NA	32253494	32165055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253246
ENSMUSG00000002076.13_32165056_32253494_2	chr17	-	1738	8	NNC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_7	393.49786712074	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	-13	True	AATAAA	-30	NA	32253494	32165055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253246
ENSMUSG00000002076.13_32165056_32253494_3	chr17	-	1312	6	NIC	ENSMUSG00000002076.13	novel	1479	7	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	514.177634675022	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	-13	True	AATAAA	-30	NA	32253494	32165055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_32165786_32226649_32226768_32230149_32230283_32241739_32241844_32252234_32252386_32253418
ENSMUSG00000002076.13_32165056_32253494_4	chr17	-	1560	8	NNC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	429.554063975131	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	-13	True	AATAAA	-30	NA	32253494	32165055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232436_32241739_32241844_32252234_32252386_32253418
ENSMUSG00000002076.13_32165056_32255323_1	chr17	-	1802	9	FSM	ENSMUSG00000002076.13	ENSMUST00000238192.2	3115	9	0	1313	0	0	multi-exon	FALSE	canonical	1	2	junction_8	409.307036343134	2735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	-13	True	AATAAA	-30	NA	32255323	32165055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418_32253677_32255269
ENSMUSG00000002103.17_91041917_91067305_1	chr2	+	1252	6	NIC	ENSMUSG00000002103.17	novel	3124	10	NA	NA	8644	22862	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTCCGGGCTGCTTTAC	6217	False	NA	NA	False	NA	NA	NA	91041916	91067305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_91042358_91042624_91042671_91042794_91042960_91064452_91064645_91065159_91065297_91067034
ENSMUSG00000002109.15_91033269_91042488_1	chr2	-	2686	11	NIC	ENSMUSG00000002109.15	novel	1557	10	NA	NA	23188	8648	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTAGCAAGAGGCCGG	NA	False	NA	NA	False	NA	NA	NA	91042488	91033268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ENSMUSG00000002109.15_91041917_91067305_1	chr2	-	2188	8	NIC	ENSMUSG00000002109.15	novel	2228	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_6	30.9970373831212	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAACAGGGTTTCTGAGT	3019	False	NA	-26	True	AATAAA	-35	NA	91067305	91041916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91064452_91065297_91067034
ENSMUSG00000002109.15_91041917_91067305_2	chr2	-	1819	10	FSM	ENSMUSG00000002109.15	ENSMUST00000028696.5	1557	10	22	-284	0	0	multi-exon	FALSE	canonical	3	56	junction_8	17.7888854188351	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAACAGGGTTTCTGAGT	3019	False	NA	-26	True	AATAAA	-35	NA	91067305	91041916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91064645_91065159_91065297_91067034
ENSMUSG00000002129.12_4110355_4130528_1	chr11	+	2902	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	5	2013	0	1109	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	1678	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTGAGATACTGTGT	NA	False	NA	-20	True	NA	NA	NA	4110354	4130528	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ENSMUSG00000002147.19_127493985_127496826_1	chr10	+	1575	5	NIC	ENSMUSG00000002147.19	novel	3775	22	NA	NA	-1284	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	101.635070226768	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAATCTACTGTACACA	790	False	NA	-6	True	AATAAA	-22	NA	127493984	127496826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_127494130_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ENSMUSG00000002147.19_127494086_127496830_1	chr10	+	1478	5	NIC	ENSMUSG00000002147.19	novel	3775	22	NA	NA	-1183	4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	101.635070226768	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTACTGTACACAATCT	891	False	NA	-2	True	AATAAA	-26	NA	127494085	127496830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_127494130_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ENSMUSG00000002147.19_127494247_127496056_1	chr10	+	744	5	ISM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	15392	770	-1022	0	3prime_fragment	FALSE	canonical	3	216	junction_3	13.3229125944742	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTGGGGTGTTAATGCT	1052	False	NA	NA	False	NA	NA	NA	127494246	127496056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ENSMUSG00000002147.19_127494247_127496830_2	chr10	+	1518	5	ISM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	15392	-4	-1022	4	3prime_fragment	FALSE	canonical	3	216	junction_3	13.3229125944742	955	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTACTGTACACAATCT	1052	False	NA	-2	True	AATAAA	-26	NA	127494246	127496830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ENSMUSG00000002147.19_127494247_127496830_3	chr10	+	1595	4	ISM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	15392	-4	-1022	4	intron_retention	FALSE	canonical	3	216	junction_3	14.6590889515307	789	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTACTGTACACAATCT	1052	False	NA	-2	True	AATAAA	-26	NA	127494246	127496830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_127494331_127494497_127494570_127495301_127495368_127495457
ENSMUSG00000002204.10_44222024_44236286_1	chr7	+	1340	9	FSM	ENSMUSG00000002204.10	ENSMUST00000002274.10	1560	9	220	0	168	0	multi-exon	FALSE	canonical	1	2	junction_5	2.82842712474619	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTTTCCATGGAAGGAT	2762	False	NA	NA	False	ATTAAA	-18	NA	44222023	44236286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44222114_44230627_44230764_44230844_44230969_44231106_44231226_44231765_44231966_44234422_44234546_44234642_44234788_44235137_44235237_44235982
ENSMUSG00000002205.17_44398060_44426939_1	chr7	+	1746	15	FSM	ENSMUSG00000002205.17	ENSMUST00000002275.15	1969	15	223	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	19.1081775420785	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGAGAGTTCAGTGTTC	NA	False	NA	16	True	AATAAA	-16	NA	44398059	44426939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
ENSMUSG00000002210.12_24099044_24122203_1	chr7	+	2233	14	NNC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	30	junction_3	34.9034170348701	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGTTTGTTCTTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	24099043	24122203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_24099317_24102816_24102973_24104951_24105027_24105121_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
ENSMUSG00000002227.16_104702152_104708086_1	chr3	-	1780	12	NNC	ENSMUSG00000002227.16	novel	3498	20	NA	NA	16584	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	384.639683275677	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104708086	104702151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707741_104708002
ENSMUSG00000002227.16_104702152_104725475_1	chr3	-	3188	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-43	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	299.904232174963	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725475	104702151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_104702379_104702689_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ENSMUSG00000002227.16_104702152_104725617_1	chr3	-	3330	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	299.904232174963	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725617	104702151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_104702379_104702689_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ENSMUSG00000002227.16_104707724_104725558_1	chr3	-	1819	10	ISM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	63	5572	0	4142	internal_fragment	FALSE	canonical	3	1102	junction_1	84.9692754928379	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGGCCTGTGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	104725558	104707723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ENSMUSG00000002227.16_104707724_104725558_2	chr3	-	1819	10	ISM	ENSMUSG00000002227.16	ENSMUST00000002297.12	3498	20	0	5572	0	4142	5prime_fragment	FALSE	canonical	2	35	junction_7	399.340011073827	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGGCCTGTGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	104725558	104707723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711702_104711786_104712030_104712219_104712424_104725251
ENSMUSG00000002228.8_104689661_104693334_1	chr3	+	1548	10	NNC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	1289	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	25.0796262795319	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGTCATTATTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	104689660	104693334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_104689842_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713_104692866_104693017
ENSMUSG00000002233.14_104696350_104701775_1	chr3	+	1074	5	FSM	ENSMUSG00000002233.14	ENSMUST00000106787.8	959	5	0	-115	0	0	multi-exon	FALSE	canonical	2	16	junction_1	97.4586450757448	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696349	104701775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_104696418_104699204_104699369_104699880_104700002_104700215_104700347_104701185
ENSMUSG00000002233.14_104696350_104701775_2	chr3	+	1056	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	146	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	22.8965062837106	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696349	104701775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
ENSMUSG00000002233.14_104696350_104701775_3	chr3	+	1160	6	NNC	ENSMUSG00000002233.14	novel	1202	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	108.939249125373	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696349	104701775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_104696400_104698799_104698904_104699204_104699369_104699880_104700002_104700215_104700347_104701185
ENSMUSG00000002250.17_28515957_28518002_1	chr17	+	449	2	NNC	ENSMUSG00000002250.17	novel	963	6	NA	NA	3737	312	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGGTGAGGGGGCGGAG	1966	False	NA	NA	False	NA	NA	NA	28515956	28518002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_28516116_28517712
ENSMUSG00000002279.20_25798059_25881697_1	chr17	+	1840	10	NNC	ENSMUSG00000002279.20	novel	1861	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	39.1949858219166	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCTCTACCTATACTGT	NA	False	NA	4	True	AATAAA	-15	NA	25798058	25881697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_25798354_25804516_25804831_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ENSMUSG00000002279.20_25798173_25881697_1	chr17	+	1726	10	NNC	ENSMUSG00000002279.20	novel	1861	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.1949858219166	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCTCTACCTATACTGT	NA	False	NA	4	True	AATAAA	-15	NA	25798172	25881697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_25798354_25804516_25804831_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ENSMUSG00000002279.20_25798173_25881800_1	chr17	+	1829	10	NNC	ENSMUSG00000002279.20	novel	1861	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.1949858219166	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCCTCCTGTCTCTAT	NA	False	NA	107	True	NA	NA	NA	25798172	25881800	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_25798354_25804516_25804831_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ENSMUSG00000002280.12_25992778_26001611_1	chr17	+	1832	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	28	695	0	-154	multi-exon	FALSE	canonical	3	237	junction_8	20.6145579627602	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACATAGGGCAGGTACC	6948	False	NA	NA	False	NA	NA	NA	25992777	26001611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_25992778_26001767_1	chr17	+	1873	11	NIC	ENSMUSG00000002280.12	novel	1921	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	76.6329563569095	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCACTGTGTGTCTGGT	6948	False	NA	8	True	AATAAA	-20	NA	25992777	26001767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000705_26000989
ENSMUSG00000002280.12_25992778_26001767_2	chr17	+	2276	10	NIC	ENSMUSG00000002280.12	novel	1921	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	241	junction_4	18.6368809979925	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCACTGTGTGTCTGGT	6948	False	NA	8	True	AATAAA	-20	NA	25992777	26001767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_25992778_26001767_3	chr17	+	1988	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	28	539	0	0	multi-exon	FALSE	canonical	3	237	junction_8	20.6145579627602	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCACTGTGTGTCTGGT	6948	False	NA	8	True	AATAAA	-20	NA	25992777	26001767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_26001799_26004556_1	chr17	+	1092	8	NIC	ENSMUSG00000002280.12	novel	2555	11	NA	NA	6006	2250	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCGCAGAAGGGACCTC	NA	False	NA	NA	False	NA	NA	NA	26001798	26004556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26004396
ENSMUSG00000002280.12_26001799_26004556_2	chr17	+	1278	9	NIC	ENSMUSG00000002280.12	novel	2555	11	NA	NA	6006	2250	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCGCAGAAGGGACCTC	NA	False	NA	NA	False	NA	NA	NA	26001798	26004556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977_26004169_26004401
ENSMUSG00000002307.17_34128388_34134564_1	chr17	+	2507	8	NNC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	222.120210145547	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5538	False	NA	12	True	AATAAA	-23	NA	34128387	34134564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_34128468_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ENSMUSG00000002307.17_34128472_34134564_1	chr17	+	2626	8	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	220.781728022433	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5622	False	NA	12	True	AATAAA	-23	NA	34128471	34134564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_34128671_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ENSMUSG00000002307.17_34128472_34134564_2	chr17	+	2644	7	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	546	junction_5	71.9320667173009	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5622	False	NA	12	True	AATAAA	-23	NA	34128471	34134564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34133037_34134316
ENSMUSG00000002308.17_34062077_34067727_1	chr17	+	1176	5	FSM	ENSMUSG00000002308.17	ENSMUST00000002379.15	2209	5	12	1021	0	0	multi-exon	FALSE	canonical	3	326	junction_3	13.0072095393286	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCTAGCCTGTTT	7005	False	NA	23	True	ATTAAA	-16	NA	34062076	34067727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34062266_34064989_34065116_34066468_34066700_34066990_34067153_34067259
ENSMUSG00000002319.17_55863179_55873091_1	chr14	-	3474	30	FSM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	50	322	-3	0	multi-exon	FALSE	canonical	0	0	junction_28	76.4571487859417	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAAGGAAGCAGCTGTG	9795	False	NA	-9	True	AATAAA	-19	NA	55873091	55863178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ENSMUSG00000002319.17_55863179_55873091_2	chr14	-	3468	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	95.3179422093	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAAGGAAGCAGCTGTG	9795	False	NA	-9	True	AATAAA	-19	NA	55873091	55863178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866529_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ENSMUSG00000002320.16_55873425_55880803_1	chr14	-	2316	5	NNC	ENSMUSG00000002320.16	novel	2398	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	136.560426185627	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCTGTCGTTGGAAGTT	5200	False	NA	48	True	AATAAA	-16	NA	55880803	55873424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_55874070_55875479_55875590_55877841_55878028_55878423_55879046_55880050
ENSMUSG00000002320.16_55878232_55880797_1	chr14	-	1561	2	FSM	ENSMUSG00000002320.16	ENSMUST00000127473.2	2271	2	31	679	0	-331	multi-exon	FALSE	canonical	3	368	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTGGATTTCCTCTTG	5206	False	NA	NA	False	NA	NA	NA	55880797	55878231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55879046_55880050
ENSMUSG00000002325.16_55841680_55846829_1	chr14	+	1563	9	FSM	ENSMUSG00000002325.16	ENSMUST00000130697.8	2459	9	238	658	238	45	multi-exon	FALSE	canonical	3	21	junction_1	14.5086181285469	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAAGCACTTTATATATT	NA	False	NA	NA	False	NA	NA	NA	55841679	55846829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55841701_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
ENSMUSG00000002325.16_55841680_55847487_1	chr14	+	2221	9	FSM	ENSMUSG00000002325.16	ENSMUST00000130697.8	2459	9	238	0	238	0	multi-exon	FALSE	canonical	3	21	junction_1	14.5086181285469	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTCATGTGGTGTCTA	NA	False	NA	9	True	NA	NA	NA	55841679	55847487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55841701_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
ENSMUSG00000002326.7_55899722_55909581_1	chr14	+	822	4	NIC	ENSMUSG00000002326.7	novel	1658	3	NA	NA	-9676	-1940	intron_retention	FALSE	non_canonical	0	0	junction_1	0	8955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGAGGCAGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	55899721	55909581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_55900083_55900871_55900955_55901268_55901317_55909251
ENSMUSG00000002326.7_55899722_55909581_2	chr14	+	884	4	NIC	ENSMUSG00000002326.7	novel	1658	3	NA	NA	-9676	-1940	intron_retention	FALSE	non_canonical	0	0	junction_1	0	8765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGAGGCAGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	55899721	55909581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_55900083_55900871_55900955_55901268_55901379_55909251
ENSMUSG00000002326.7_55909715_55916201_1	chr14	+	1514	10	FSM	ENSMUSG00000002326.7	ENSMUST00000002397.7	1993	10	23	456	0	428	multi-exon	TRUE	canonical	3	97	junction_1	15.6828127988557	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTAGACGTTCTTCTAT	NA	False	NA	21	True	ATTAAA	-22	NA	55909714	55916201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
ENSMUSG00000002326.7_55909837_55916201_1	chr14	+	1500	10	NIC	ENSMUSG00000002326.7	novel	1993	10	NA	NA	0	428	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	39.4658783705058	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTAGACGTTCTTCTAT	NA	False	NA	21	True	ATTAAA	-22	NA	55909836	55916201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_55909950_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
ENSMUSG00000002326.7_55913665_55919265_1	chr14	+	2474	9	NIC	ENSMUSG00000002326.7	novel	545	3	NA	NA	-749	2608	intron_retention	FALSE	non_canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCACTTCCGCCTGGGCGCG	NA	False	NA	NA	False	ACTAAA	-37	NA	55913664	55919265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_55914739_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ENSMUSG00000002329.8_55896328_55897908_1	chr14	-	753	5	FSM	ENSMUSG00000002329.8	ENSMUST00000226659.2	1730	5	0	977	0	887	multi-exon	FALSE	canonical	3	428	junction_3	25.3673017879316	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGGTTGTTTCCATTTT	2342	False	NA	-16	True	ATTAAA	-34	NA	55897908	55896327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897686_55897794
ENSMUSG00000002332.17_55976477_55983074_1	chr14	-	1402	9	NNC	ENSMUSG00000002332.17	novel	1477	9	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	53.6456836567491	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTTCTCATTCTGT	NA	False	NA	0	True	AATAAA	-20	NA	55983074	55976476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910_55980991_55981114_55981253_55982370_55982546_55982897
ENSMUSG00000002342.18_70625055_70635502_1	chr8	+	2189	12	FSM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	0	829	0	2	multi-exon	FALSE	canonical	3	91	junction_1	38.6768771547844	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTACCATGGTGCC	5866	False	NA	9	True	AATAAA	-19	NA	70625054	70635502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002343.12_70672848_70686776_2	chr8	-	2061	8	NIC	ENSMUSG00000002343.12	novel	2263	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	30.2722341967901	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAAGTGAGTGTAAT	5008	False	NA	-26	True	NA	NA	NA	70686776	70672847	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_70673528_70674755_70674894_70675167_70675300_70676193_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686595
ENSMUSG00000002343.12_70676081_70687099_1	chr8	-	1383	5	ISM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	17	3259	0	-245	5prime_fragment	FALSE	canonical	3	75	junction_4	11.8822346383161	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTAGGGTCGTGGTTCTT	4685	False	NA	NA	False	AATGAA	-16	NA	70687099	70676080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686759
ENSMUSG00000002345.19_70592149_70598199_1	chr8	+	978	4	FSM	ENSMUSG00000002345.19	ENSMUST00000123976.2	756	4	-208	-14	0	0	multi-exon	FALSE	canonical	3	180	junction_1	5.79271573232759	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTTTGACCAGTCTG	8613	False	NA	25	True	AATAAA	-25	NA	70592148	70598199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673
ENSMUSG00000002345.19_70592357_70599911_1	chr8	+	607	6	FSM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	208	-5	0	0	multi-exon	TRUE	canonical	3	86	junction_5	44.6183818621877	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCTCTTTCCATGCTGGG	8821	False	NA	22	True	AATACA	-16	NA	70592356	70599911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70599739
ENSMUSG00000002345.19_70592357_70600436_1	chr8	+	1132	6	FSM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	208	-530	0	467	multi-exon	FALSE	canonical	3	86	junction_5	44.6183818621877	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAACAGGAGGAGCCGAG	8821	False	NA	NA	False	NA	NA	NA	70592356	70600436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70599739
ENSMUSG00000002372.10_57016968_57018764_1	chr17	+	1359	3	ISM	ENSMUSG00000002372.10	ENSMUST00000233319.2	2567	17	36603	0	13233	0	3prime_fragment	FALSE	canonical	3	438	junction_1	5.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	5191	False	NA	NA	False	ATTAAA	-14	NA	57016967	57018764	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_57017231_57017590_57017778_57017855
ENSMUSG00000002384.3_122990579_123033744_1	chr4	+	1189	11	Genic_Genomic	ENSMUSG00000002384.3	novel	1326	6	NA	NA	-8379	7852	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2027	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAAGCCGGCACTCGGC	NA	False	NA	NA	False	NA	NA	NA	122990578	123033744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_122990585_123020912_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033694
ENSMUSG00000002384.3_123020908_123033744_1	chr4	+	1259	10	Genic_Genomic	ENSMUSG00000002384.3	novel	1326	6	NA	NA	7791	7852	multi-exon	FALSE	non_canonical	0	0	junction_1	0	426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAAGCCGGCACTCGGC	4272	False	NA	NA	False	NA	NA	NA	123020907	123033744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030593_123030692_123031318_123031363_123032658_123032758_123033694
ENSMUSG00000002384.3_123020908_123033744_2	chr4	+	1180	10	Genic_Genomic	ENSMUSG00000002384.3	novel	1326	6	NA	NA	7791	7852	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1781	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAAGCCGGCACTCGGC	4272	False	NA	NA	False	NA	NA	NA	123020907	123033744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033702
ENSMUSG00000002384.3_123020908_123033744_4	chr4	+	1251	10	Genic_Genomic	ENSMUSG00000002384.3	novel	1326	6	NA	NA	7791	7852	multi-exon	FALSE	non_canonical	0	0	junction_1	0	275	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAAGCCGGCACTCGGC	4272	False	NA	NA	False	NA	NA	NA	123020907	123033744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030593_123030692_123031318_123031363_123032658_123032758_123033702
ENSMUSG00000002395.15_71819586_71822375_1	chr8	+	1132	7	NNC	ENSMUSG00000002395.15	novel	973	9	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_4	312.764954345378	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71819585	71822375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820773_71821493_71821522_71821775_71821948_71822170
ENSMUSG00000002395.15_71819586_71822375_3	chr8	+	1037	8	NNC	ENSMUSG00000002395.15	novel	973	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	365.528915073899	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71819585	71822375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_71819723_71819817_71820014_71820287_71820338_71820413_71820493_71820602_71820773_71821493_71821522_71821775_71821948_71822170
ENSMUSG00000002395.15_71819861_71822375_1	chr8	+	837	6	NNC	ENSMUSG00000002395.15	novel	854	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	342.602043192973	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71819860	71822375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821750_71821948_71822170
ENSMUSG00000002395.15_71819861_71822375_10	chr8	+	970	7	NNC	ENSMUSG00000002395.15	novel	1000	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	394.486445338183	2179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71819860	71822375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_71820014_71820174_71820338_71820413_71820493_71820602_71820773_71821493_71821522_71821775_71821948_71822170
ENSMUSG00000002395.15_71819861_71822375_2	chr8	+	847	7	NNC	ENSMUSG00000002395.15	novel	854	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	321.579781011735	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71819860	71822375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821229_71821775_71821948_71822170
ENSMUSG00000002395.15_71819861_71822375_3	chr8	+	847	6	NNC	ENSMUSG00000002395.15	novel	854	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	342.602043192973	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71819860	71822375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821740_71821948_71822170
ENSMUSG00000002395.15_71819861_71822375_4	chr8	+	807	6	NNC	ENSMUSG00000002395.15	novel	854	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	400.664647804121	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71819860	71822375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_71820014_71820413_71820493_71820602_71820773_71821493_71821522_71821775_71821948_71822170
ENSMUSG00000002395.15_71819861_71822375_8	chr8	+	848	7	NNC	ENSMUSG00000002395.15	novel	854	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	312.764954345378	1999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71819860	71822375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821485_71821522_71821775_71821948_71822170
ENSMUSG00000002395.15_71819861_71822375_9	chr8	+	497	5	NNC	ENSMUSG00000002395.15	novel	854	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	353.281757242007	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71819860	71822375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71822313
ENSMUSG00000002395.15_71820285_71822375_1	chr8	+	699	6	NNC	ENSMUSG00000002395.15	novel	1000	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	341.95344712402	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71820284	71822375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_71820338_71820413_71820493_71820602_71820756_71821484_71821522_71821775_71821948_71822170
ENSMUSG00000002395.15_71820285_71822375_2	chr8	+	1244	5	NIC	ENSMUSG00000002395.15	novel	1000	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	844	junction_2	28.3240180765371	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71820284	71822375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_71820338_71820413_71820493_71820602_71820756_71821193_71821948_71822170
ENSMUSG00000002395.15_71820285_71822375_3	chr8	+	961	5	NNC	ENSMUSG00000002395.15	novel	1000	8	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_3	382.313598371808	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71820284	71822375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_71820338_71820413_71820493_71820602_71820773_71821493_71821948_71822170
ENSMUSG00000002395.15_71820285_71822375_4	chr8	+	944	5	NIC	ENSMUSG00000002395.15	novel	1000	8	NA	NA	0	-1	intron_retention	FALSE	canonical	2	7	junction_3	379.289137730044	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71820284	71822375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_71820338_71820413_71820493_71820602_71820756_71821493_71821948_71822170
ENSMUSG00000002428.13_20111984_20172647_1	chr3	+	3905	26	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	76	junction_25	37.5784193387641	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTCTTTGGTGTCACTT	6947	False	NA	9	True	AATAAA	-13	NA	20111983	20172647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
ENSMUSG00000002458.14_181330212_181335724_2	chr2	-	1362	5	FSM	ENSMUSG00000002458.14	ENSMUST00000108772.8	779	5	16	-599	-1	0	multi-exon	FALSE	canonical	3	30	junction_4	46.2729672703189	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCTTTCAAGTTGCT	NA	False	NA	-12	True	AATAAA	-17	NA	181335724	181330211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181335671
ENSMUSG00000002477.6_10617796_10627971_1	chr18	+	578	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	21	259	0	16	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	11947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGTCTGTTGATTGT	-11	True	NA	-13	True	AATAAA	-15	NA	10617795	10627971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
ENSMUSG00000002477.6_10617796_10628083_1	chr18	+	690	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	21	147	0	128	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	13102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGATTTCTTTGAGTCCA	-11	True	NA	26	True	AATACA	-17	NA	10617795	10628083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
ENSMUSG00000002500.16_24947295_24955117_1	chr17	+	1304	9	ISM	ENSMUSG00000002500.16	ENSMUST00000170239.9	1375	10	501	0	147	0	3prime_fragment	FALSE	canonical	3	9	junction_2	2.8613807855649	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGTCTCTGTGTGTC	NA	False	NA	18	True	AATAAA	-18	NA	24947294	24955117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_24947484_24949842_24950012_24951309_24951446_24952282_24952470_24952557_24952719_24952890_24952993_24954390_24954487_24954695_24954816_24954973
ENSMUSG00000002504.16_24858260_24859701_1	chr17	-	1237	2	ISM	ENSMUSG00000002504.16	ENSMUST00000019684.13	1717	6	4263	0	4230	0	3prime_fragment	FALSE	canonical	3	161	junction_1	0	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGCCTGTGTGTTTT	NA	False	NA	-6	True	ATTAAA	-17	NA	24859701	24858259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_24859364_24859568
ENSMUSG00000002504.16_24858744_24859701_1	chr17	-	753	2	ISM	ENSMUSG00000002504.16	ENSMUST00000019684.13	1717	6	4263	484	4230	0	3prime_fragment	FALSE	canonical	3	161	junction_1	0	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTCTTACCCACCCTGT	NA	False	NA	0	True	AATAAA	-21	NA	24859701	24858743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_24859364_24859568
ENSMUSG00000002550.17_32126684_32145017_1	chr2	-	2836	20	NIC	ENSMUSG00000002550.17	novel	2005	7	NA	NA	1664	18330	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTGGGGGCGAGGCCG	NA	False	NA	NA	False	NA	NA	NA	32145017	32126683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUSG00000002635.12_33884058_33896095_1	chr7	-	1170	7	FSM	ENSMUSG00000002635.12	ENSMUST00000002710.10	1295	7	-9	134	-9	0	multi-exon	FALSE	canonical	3	638	junction_2	61.3994209165599	3098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTGTTTACCTTAT	5723	False	NA	NA	False	ATTAAA	-20	NA	33896095	33884057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ENSMUSG00000002658.10_57310405_57318398_1	chr17	-	1821	13	NNC	ENSMUSG00000002658.10	novel	1717	13	NA	NA	-110	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	176.841972770418	2936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGTGCGAGTCATCA	NA	False	NA	-6	True	AATAAA	-13	NA	57318398	57310404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_57310632_57310720_57310812_57310914_57311048_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
ENSMUSG00000002661.15_57304343_57306137_1	chr17	+	558	3	FSM	ENSMUSG00000002661.15	ENSMUST00000074141.14	736	3	4	174	0	0	multi-exon	FALSE	canonical	3	32	junction_1	221	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGGGATCTTCAAATG	371	False	NA	4	True	AATAAA	-14	NA	57304342	57306137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_57304568_57305670_57305796_57305929
ENSMUSG00000002661.15_57304343_57306137_2	chr17	+	732	4	FSM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	0	185	0	0	multi-exon	FALSE	canonical	3	443	junction_1	15.369522511198	1929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGGGATCTTCAAATG	371	False	NA	4	True	AATAAA	-14	NA	57304342	57306137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_57304568_57305388_57305563_57305670_57305796_57305929
ENSMUSG00000002668.9_57369185_57372918_1	chr17	-	1107	4	NIC	ENSMUSG00000002668.9	novel	2984	21	NA	NA	1974	3720	intron_retention	FALSE	non_canonical	0	0	junction_1	0	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGGGCGGGGCGAAGAG	NA	False	NA	NA	False	NA	NA	NA	57372918	57369184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_57369229_57369594_57369767_57370636_57370699_57372089
ENSMUSG00000002668.9_57373055_57377626_1	chr17	-	1229	8	NIC	ENSMUSG00000002668.9	novel	2521	24	NA	NA	1171	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_2	6.23027499638758	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTATCTGGGGCTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	57377626	57373054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_57373642_57373731_57373943_57374048_57374117_57374592_57374701_57374788_57374834_57377112_57377185_57377407_57377449_57377529
ENSMUSG00000002679.15_81620334_81641759_1	chr12	-	1032	7	NNC	ENSMUSG00000002679.15	novel	1059	8	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.882056392996	2250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCTTTCCCTTGTCTC	NA	False	NA	-2	True	AATAAA	-22	NA	81641759	81620333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_81620760_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
ENSMUSG00000002718.15_166747979_166788187_3	chr2	+	1783	10	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	0	-122	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	283.902478474477	516	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGACAGGATTT	NA	False	NA	11	True	AATAAA	-23	NA	166747978	166788187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_166748098_166757089_166757185_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ENSMUSG00000002718.15_166786454_166788309_1	chr2	+	761	2	ISM	ENSMUSG00000002718.15	ENSMUST00000163437.2	1992	17	17004	-581	3701	0	3prime_fragment	FALSE	canonical	3	897	junction_1	0	509	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTTTTTATTGTTTTC	NA	False	NA	37	True	CATAAA	-33	NA	166786453	166788309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_166786529_166787623
ENSMUSG00000002728.15_145745217_145758238_1	chr2	+	674	7	NNC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	0	-107	at_least_one_novel_splicesite	FALSE	non_canonical	3	24	junction_6	449.099623939079	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	-43	True	AGTAAA	-18	NA	145745216	145758238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453_145757600_145757723_145757808_145758112
ENSMUSG00000002728.15_145745217_145758238_2	chr2	+	973	5	NNC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	0	-107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	643.783882603471	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	-43	True	AGTAAA	-18	NA	145745216	145758238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_145745307_145753592_145753684_145754312_145754449_145757458_145757600_145757723
ENSMUSG00000002728.15_145745217_145758238_3	chr2	+	964	5	NNC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	0	-107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	559.902223606944	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	-43	True	AGTAAA	-18	NA	145745216	145758238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_145745287_145753586_145753684_145754312_145754449_145757453_145757600_145757723
ENSMUSG00000002728.15_145745217_145758238_4	chr2	+	978	5	NNC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	0	-107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	559.902223606944	1740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	-43	True	AGTAAA	-18	NA	145745216	145758238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_145745307_145753592_145753684_145754312_145754449_145757453_145757600_145757723
ENSMUSG00000002728.15_145745217_145758238_5	chr2	+	954	5	NIC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	0	-107	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	559.902223606944	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	-43	True	AGTAAA	-18	NA	145745216	145758238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_145745283_145753592_145753684_145754312_145754449_145757453_145757600_145757723
ENSMUSG00000002728.15_145745217_145758238_6	chr2	+	659	6	NNC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	0	-107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	620.753284324779	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	-43	True	AGTAAA	-18	NA	145745216	145758238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_145745287_145753586_145753684_145754312_145754449_145757453_145757600_145757723_145757808_145758112
ENSMUSG00000002728.15_145745217_145758238_7	chr2	+	704	7	NNC	ENSMUSG00000002728.15	novel	1172	6	NA	NA	0	-107	at_least_one_novel_splicesite	FALSE	non_canonical	3	24	junction_6	516.133515241508	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	-43	True	AGTAAA	-18	NA	145745216	145758238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_145745283_145750510_145750536_145753592_145753714_145754312_145754449_145757453_145757600_145757723_145757808_145758112
ENSMUSG00000002728.15_145745217_145758238_8	chr2	+	1608	5	NIC	ENSMUSG00000002728.15	novel	1172	6	NA	NA	0	-107	intron_retention	FALSE	canonical	3	961	junction_2	190.755570036631	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	-43	True	AGTAAA	-18	NA	145745216	145758238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_145745283_145750510_145750536_145753592_145754449_145757453_145757600_145757723
ENSMUSG00000002728.15_145745217_145758238_9	chr2	+	930	5	NIC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	0	-107	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	539.338657524194	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	-43	True	AGTAAA	-18	NA	145745216	145758238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_145745283_145753616_145753684_145754312_145754449_145757453_145757600_145757723
ENSMUSG00000002728.15_145745217_145758345_3	chr2	+	781	7	NNC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	24	junction_6	449.099623939079	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTAATCATCCCTGTC	NA	False	NA	31	True	TATAAA	-16	NA	145745216	145758345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453_145757600_145757723_145757808_145758112
ENSMUSG00000002767.14_46957169_46961058_1	chr17	+	1008	7	NNC	ENSMUSG00000002767.14	novel	1031	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	420.832277226398	3026	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	False	NA	28	True	AATAAA	-17	NA	46957168	46961058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960035_46960818
ENSMUSG00000002767.14_46957169_46961058_2	chr17	+	887	7	NNC	ENSMUSG00000002767.14	novel	1031	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	506.391400005964	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	False	NA	28	True	AATAAA	-17	NA	46957168	46961058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_46957191_46958315_46958485_46959162_46959309_46959397_46959514_46959584_46959696_46959960_46960035_46960809
ENSMUSG00000002767.14_46957169_46961058_3	chr17	+	1044	7	NNC	ENSMUSG00000002767.14	novel	1031	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	404.152920728446	4631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	False	NA	28	True	AATAAA	-17	NA	46957168	46961058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959933_46960035_46960809
ENSMUSG00000002768.9_46985476_46991729_1	chr17	+	1846	11	NIC	ENSMUSG00000002768.9	novel	706	4	NA	NA	-4243	-1050	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGACTTCGTCCTTCCG	NA	False	NA	NA	False	GATAAA	-4	NA	46985475	46991729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46991627
ENSMUSG00000002768.9_46985476_46991855_1	chr17	+	2125	12	NIC	ENSMUSG00000002768.9	novel	706	4	NA	NA	-4243	-924	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCGGTTTGTGCGCATG	NA	False	NA	NA	False	NA	NA	NA	46985475	46991855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ENSMUSG00000002768.9_46992050_46993900_1	chr17	+	679	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233430.2	945	4	138	128	0	0	multi-exon	FALSE	canonical	3	590	junction_1	155.5913450892	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCGACTCAGACCTCTC	NA	False	NA	NA	False	NA	NA	NA	46992049	46993900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46992089_46992542_46992824_46992934_46993038_46993644
ENSMUSG00000002768.9_46992050_46994031_1	chr17	+	781	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233491.2	673	4	121	-229	0	3	multi-exon	FALSE	canonical	3	42	junction_1	413.462076723959	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACACCGCCTGTGCTCCT	NA	False	NA	-1	True	AATAAA	-24	NA	46992049	46994031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46992060_46992542_46992824_46992934_46993038_46993644
ENSMUSG00000002768.9_46992050_46994031_2	chr17	+	810	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233430.2	945	4	138	-3	0	3	multi-exon	FALSE	canonical	3	590	junction_1	155.5913450892	2550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACACCGCCTGTGCTCCT	NA	False	NA	-1	True	AATAAA	-24	NA	46992049	46994031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46992089_46992542_46992824_46992934_46993038_46993644
ENSMUSG00000002768.9_46992050_46994166_1	chr17	+	945	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233430.2	945	4	138	-138	0	129	multi-exon	FALSE	canonical	3	590	junction_1	155.5913450892	2763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCTTGGAGCACTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	46992049	46994166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46992089_46992542_46992824_46992934_46993038_46993644
ENSMUSG00000002778.15_45522249_45532671_1	chr7	+	1061	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	53	485	0	0	multi-exon	FALSE	canonical	3	208	junction_1	16.5378354085412	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTTTGATTCTGATG	3997	False	NA	15	True	AAGAAA	-25	NA	45522248	45532671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
ENSMUSG00000002778.15_45522249_45532777_1	chr7	+	1167	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	53	379	0	0	multi-exon	FALSE	canonical	3	208	junction_1	16.5378354085412	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCCAAAATCCCACCCCA	3997	False	NA	NA	False	NA	NA	NA	45522248	45532777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
ENSMUSG00000002797.10_54962633_54969850_1	chr6	-	711	4	FSM	ENSMUSG00000002797.10	ENSMUST00000203208.2	401	4	-2	-308	-2	0	multi-exon	FALSE	canonical	0	0	junction_2	74.2981979742593	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCCGTGGGTTCTCCT	2785	False	NA	-2	True	ATTAAA	-32	NA	54969850	54962632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_54962987_54963817_54963946_54966484_54966543_54969679
ENSMUSG00000002797.10_54962633_54969935_1	chr6	-	892	4	FSM	ENSMUSG00000002797.10	ENSMUST00000131475.2	3960	4	0	3068	0	0	multi-exon	FALSE	canonical	3	101	junction_2	27.1947707391615	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCCGTGGGTTCTCCT	2700	False	NA	-2	True	ATTAAA	-32	NA	54969935	54962632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_54962987_54963817_54963954_54966396_54966543_54969679
ENSMUSG00000002797.10_54962633_54969935_2	chr6	-	891	4	NNC	ENSMUSG00000002797.10	novel	3960	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	74.2981979742593	1403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCCGTGGGTTCTCCT	2700	False	NA	-2	True	ATTAAA	-32	NA	54969935	54962632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_54962987_54963817_54963949_54966392_54966543_54969679
ENSMUSG00000002797.10_54962917_54969935_1	chr6	-	608	4	FSM	ENSMUSG00000002797.10	ENSMUST00000131475.2	3960	4	0	3352	0	0	multi-exon	FALSE	canonical	3	101	junction_2	27.1947707391615	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATGAGTATAAAGGAAAG	2700	False	NA	NA	False	ATTAAA	-12	NA	54969935	54962916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_54962987_54963817_54963954_54966396_54966543_54969679
ENSMUSG00000002804.5_112898349_112905744_1	chr12	-	565	4	FSM	ENSMUSG00000002804.5	ENSMUST00000221497.2	355	4	-14	-196	0	0	multi-exon	FALSE	canonical	2	11	junction_1	100.422441051125	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCGCTGGCTTTGAGC	8847	False	NA	-6	True	AATAAA	-19	NA	112905744	112898348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_112898671_112902414_112902480_112902898_112902943_112905610
ENSMUSG00000002808.8_19776003_19803958_1	chr13	-	2220	3	FSM	ENSMUSG00000002808.8	ENSMUST00000002885.8	2363	3	16	127	0	-127	multi-exon	FALSE	canonical	3	59	junction_2	5.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGAATTATTCTTTGATG	NA	False	NA	NA	False	ATTAAA	-16	NA	19803958	19776002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_19777519_19778616_19778826_19803463
ENSMUSG00000002812.5_60590671_60605012_1	chr11	-	4243	22	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	535	14278	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCCGCGGGATGCGCC	NA	False	NA	NA	False	NA	NA	NA	60605012	60590670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603924_60603948
ENSMUSG00000002814.16_60641566_60668099_1	chr11	-	1289	11	ISM	ENSMUSG00000002814.16	ENSMUST00000120417.8	2318	18	-9	8506	-8	-1283	5prime_fragment	FALSE	canonical	3	134	junction_7	10.9617516848358	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAACCTGGTTGCATTG	NA	False	NA	NA	False	NA	NA	NA	60668099	60641565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ENSMUSG00000002820.7_21176602_21185043_1	chr9	+	1913	10	FSM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	13	4025	0	2	multi-exon	FALSE	canonical	3	441	junction_8	36.048663953599	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGGCGTTGTTGACA	8647	False	NA	23	True	GATAAA	-15	NA	21176601	21185043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ENSMUSG00000002820.7_21184753_21199253_1	chr9	+	2586	19	NIC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	5379	10185	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGAGACCTAGCGCGCA	386	False	NA	NA	False	NA	NA	NA	21184752	21199253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
ENSMUSG00000002825.9_21323141_21331557_1	chr9	+	1371	9	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	687	junction_5	69.0261499360931	2613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGTTTTCATTTAAGC	2377	False	NA	29	True	TATAAA	-15	NA	21323140	21331557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21331009_21331331
ENSMUSG00000002831.15_56386638_56407607_1	chr17	-	2281	16	NIC	ENSMUSG00000002831.15	novel	5755	9	NA	NA	9195	20953	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	595	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATTGGGTTCAGCACGA	9745	False	NA	NA	False	NA	NA	NA	56407607	56386637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ENSMUSG00000002831.15_56386638_56407607_2	chr17	-	2308	16	NIC	ENSMUSG00000002831.15	novel	5755	9	NA	NA	9195	20953	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	575	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATTGGGTTCAGCACGA	9745	False	NA	NA	False	NA	NA	NA	56407607	56386637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ENSMUSG00000002835.10_56347439_56375027_1	chr17	+	3256	15	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	0	-805	at_least_one_novel_splicesite	TRUE	non_canonical	3	209	junction_1	81.0012597533684	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTCTTCTGTCTCA	NA	False	NA	21	True	TATAAA	-15	NA	56347438	56375027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_56347464_56347493_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ENSMUSG00000002835.10_56375536_56382017_1	chr17	+	1239	9	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	10793	2728	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGAAGTCCCGCCTGGTT	3092	False	NA	NA	False	AAGAAA	-11	NA	56375535	56382017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377973_56380073_56380237_56381835
ENSMUSG00000002835.10_56377411_56382017_1	chr17	+	859	7	NNC	ENSMUSG00000002835.10	novel	7698	11	NA	NA	12668	2728	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	164	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGAAGTCCCGCCTGGTT	4967	False	NA	NA	False	AAGAAA	-11	NA	56377410	56382017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_56377556_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
ENSMUSG00000002844.10_38265766_38273044_1	chr16	-	1571	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	21	1374	0	-1374	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	6106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTCTGACTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	38273044	38265765	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
ENSMUSG00000002845.15_38379060_38411746_1	chr16	+	1839	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	0	-194	0	38	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	2972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7070	False	NA	23	True	AGTAAA	-14	NA	38379059	38411746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUSG00000002845.15_38379060_38411746_2	chr16	+	1656	8	NNC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	0	38	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	322.52169678637	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7070	False	NA	23	True	AGTAAA	-14	NA	38379059	38411746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_38379125_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408670_38411273
ENSMUSG00000002845.15_38379060_38411746_3	chr16	+	1639	9	NNC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	0	38	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	290.386703380165	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7070	False	NA	23	True	AGTAAA	-14	NA	38379059	38411746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408670_38411273
ENSMUSG00000002845.15_38379060_38412525_1	chr16	+	2618	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	0	-973	0	1	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	3087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCTATTTGTGAGCATT	7070	False	NA	5	True	AATAAA	-16	NA	38379059	38412525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUSG00000002845.15_38383223_38411746_1	chr16	+	2044	9	FSM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	49	778	0	38	multi-exon	FALSE	canonical	1	126	junction_1	222.417084269622	2778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	NA	False	NA	23	True	AGTAAA	-14	NA	38383222	38411746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUSG00000002845.15_38383223_38411746_2	chr16	+	1965	9	NNC	ENSMUSG00000002845.15	novel	2871	9	NA	NA	0	38	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	306.891445587849	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	NA	False	NA	23	True	AGTAAA	-14	NA	38383222	38411746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_38383410_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408670_38411273
ENSMUSG00000002846.10_38318831_38343003_1	chr16	-	1429	7	FSM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	22	122	0	-122	multi-exon	FALSE	canonical	3	208	junction_6	22.2666916167525	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGAACCAAAAAGCAACC	NA	False	NA	NA	False	NA	NA	NA	38343003	38318830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
ENSMUSG00000002846.10_38319015_38343003_1	chr16	-	1245	7	FSM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	22	306	0	-306	multi-exon	FALSE	canonical	3	208	junction_6	22.2666916167525	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCATCACCACATGGCTTC	NA	False	NA	NA	False	NA	NA	NA	38343003	38319014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
ENSMUSG00000002847.8_38216479_38228048_1	chr16	-	878	5	ISM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	25459	0	10108	0	3prime_fragment	FALSE	canonical	3	158	junction_2	28.8823042709546	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTGGTTGTTTTGTTG	NA	False	NA	-3	True	AATAAA	-20	NA	38228048	38216478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953
ENSMUSG00000002847.8_38216479_38228048_2	chr16	-	872	5	NNC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	10108	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	79.8197187416744	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTGGTTGTTTTGTTG	NA	False	NA	-3	True	AATAAA	-20	NA	38228048	38216478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_38216898_38217700_38217866_38221237_38221337_38225894_38225989_38227953
ENSMUSG00000002847.8_38216479_38253266_1	chr16	-	1733	11	FSM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	241	0	241	0	multi-exon	FALSE	canonical	2	3	junction_9	86.6256313108309	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTGGTTGTTTTGTTG	NA	False	NA	-3	True	AATAAA	-20	NA	38253266	38216478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235679_38235858_38237421_38237624_38253165
ENSMUSG00000002870.9_88860456_88875662_1	chr6	-	3271	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	100	0	-3	0	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	2600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88875662	88860455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ENSMUSG00000002870.9_88860693_88875662_1	chr6	-	3034	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	100	237	-3	-237	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	1705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTCTGGACTGTTT	NA	False	NA	0	True	NA	NA	NA	88875662	88860692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ENSMUSG00000002870.9_88860806_88875662_1	chr6	-	2921	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	100	350	-3	-350	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCCCTCTAGAGCACTC	NA	False	NA	-11	True	ATTAAA	-17	NA	88875662	88860805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ENSMUSG00000002885.15_84441806_84449906_1	chr8	-	1578	11	NNC	ENSMUSG00000002885.15	novel	2980	18	NA	NA	1532	8074	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTATAAGGACGCTGTCG	NA	False	NA	NA	False	NA	NA	NA	84449906	84441805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_84441967_84446015_84446228_84446440_84446569_84447184_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUSG00000002885.15_84441901_84449906_1	chr8	-	1485	11	NNC	ENSMUSG00000002885.15	novel	2980	18	NA	NA	1532	7979	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGCGCGCTACAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	84449906	84441900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449758
ENSMUSG00000002885.15_84441901_84449906_2	chr8	-	1479	11	NNC	ENSMUSG00000002885.15	novel	2980	18	NA	NA	1532	7979	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGCGCGCTACAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	84449906	84441900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_84441967_84446026_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUSG00000002885.15_84441901_84449906_3	chr8	-	1490	11	NIC	ENSMUSG00000002885.15	novel	2980	18	NA	NA	1532	7979	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	6186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGCGCGCTACAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	84449906	84441900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUSG00000002885.15_84441901_84449906_4	chr8	-	1926	11	NIC	ENSMUSG00000002885.15	novel	2980	18	NA	NA	1532	7979	intron_retention	FALSE	non_canonical	0	0	junction_1	0	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGCGCGCTACAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	84449906	84441900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448094_84448154_84448362_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUSG00000002885.15_84441901_84449906_5	chr8	-	1484	11	NNC	ENSMUSG00000002885.15	novel	2980	18	NA	NA	1532	7979	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGCGCGCTACAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	84449906	84441900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_84441967_84446015_84446228_84446440_84446569_84447177_84447265_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUSG00000002885.15_84449880_84467812_2	chr8	-	2990	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-10	-113	0	0	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAAGCTTTGGAACAATA	NA	False	NA	NA	False	AATAAA	-17	NA	84467812	84449879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ENSMUSG00000002885.15_84449993_84467955_1	chr8	-	3020	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-153	0	0	0	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCACGTTTGCTGGTGA	NA	False	NA	-11	True	ATTAAA	-19	NA	84467955	84449992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ENSMUSG00000002949.16_4309731_4325913_1	chr8	-	2098	13	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	148.130479270435	2083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	False	NA	-13	True	AATAAA	-22	NA	4325913	4309730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_4310256_4310511_4310931_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ENSMUSG00000002963.18_44506591_44512074_1	chr7	+	1834	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	8	342	0	0	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9343	False	NA	15	True	AATAAA	-17	NA	44506590	44512074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUSG00000002963.18_44506764_44512074_1	chr7	+	1364	15	NIC	ENSMUSG00000002963.18	novel	1770	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	62.5039182445258	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9516	False	NA	15	True	AATAAA	-17	NA	44506763	44512074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_44506979_44507586_44507634_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUSG00000002963.18_44506764_44512074_2	chr7	+	1661	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	181	342	0	0	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9516	False	NA	15	True	AATAAA	-17	NA	44506763	44512074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUSG00000002963.18_44506764_44512074_3	chr7	+	1490	15	NNC	ENSMUSG00000002963.18	novel	1770	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	61.2335775568288	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9516	False	NA	15	True	AATAAA	-17	NA	44506763	44512074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_44506979_44508000_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUSG00000002963.18_44506764_44512416_1	chr7	+	2003	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	181	0	0	0	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGACTTAGCAGCTGTGT	9516	False	NA	90	True	NA	NA	NA	44506763	44512416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUSG00000002968.10_44528808_44541798_1	chr7	-	2281	18	FSM	ENSMUSG00000002968.10	ENSMUST00000003049.8	2619	18	338	0	-8	0	multi-exon	FALSE	canonical	3	744	junction_9	66.5493546850497	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCTCCCGTGACTGACG	6993	False	NA	-6	True	AATAAA	-17	NA	44541798	44528807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ENSMUSG00000002983.18_19340142_19362376_1	chr7	-	2328	11	NIC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_10	54.7927002437368	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTCTTCTTTCTTCTT	NA	False	NA	-1	True	AATAAA	-20	NA	19362376	19340141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19362000
ENSMUSG00000002985.17_19430197_19432977_1	chr7	-	1109	4	FSM	ENSMUSG00000002985.17	ENSMUST00000174064.9	1408	4	136	163	0	0	multi-exon	FALSE	canonical	3	8700	junction_3	835.854984764436	6331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGAGTCTCTGTGAGT	NA	False	NA	-30	True	AATAAA	-14	NA	19432977	19430196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432935
ENSMUSG00000002985.17_19430197_19433113_1	chr7	-	1245	4	FSM	ENSMUSG00000002985.17	ENSMUST00000174064.9	1408	4	0	163	0	0	multi-exon	FALSE	canonical	3	8700	junction_3	835.854984764436	6367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGAGTCTCTGTGAGT	NA	False	NA	-30	True	AATAAA	-14	NA	19433113	19430196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432935
ENSMUSG00000002996.18_31976455_32000220_1	chr12	-	2626	11	FSM	ENSMUSG00000002996.18	ENSMUST00000172314.9	3142	11	314	202	0	-202	multi-exon	FALSE	canonical	3	134	junction_10	30.1004983347452	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTGATTTCTGGTTGA	NA	False	NA	-8	True	AATAAA	-16	NA	32000220	31976454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_31977507_31978582_31978725_31980680_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
ENSMUSG00000003031.15_134897364_134902476_1	chr6	+	323	2	NNC	ENSMUSG00000003031.15	novel	4552	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAGTGCAACTGTCC	NA	False	NA	13	True	AATAAA	-18	NA	134897363	134902476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_134897559_134902348
ENSMUSG00000003031.15_134897364_134902476_3	chr6	+	435	2	NNC	ENSMUSG00000003031.15	novel	4552	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAGTGCAACTGTCC	NA	False	NA	13	True	AATAAA	-18	NA	134897363	134902476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_134897672_134902349
ENSMUSG00000003031.15_134897364_134902476_6	chr6	+	323	2	NNC	ENSMUSG00000003031.15	novel	4552	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAGTGCAACTGTCC	NA	False	NA	13	True	AATAAA	-18	NA	134897363	134902476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_134897548_134902337
ENSMUSG00000003032.9_55527143_55532186_1	chr4	-	2749	5	FSM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	280	0	267	0	multi-exon	FALSE	canonical	3	1140	junction_2	61.7267162580353	1119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAATCTCTTTGTTTTTT	22	True	NA	-7	True	AATAAA	-21	NA	55532186	55527142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866
ENSMUSG00000003033.16_72993940_73011229_1	chr8	+	2000	12	NNC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	170.769527155634	1245	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	19	True	ATTAAA	-20	NA	72993939	73011229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007058_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ENSMUSG00000003037.17_72915203_72934108_1	chr8	+	751	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	159	3640	0	-3640	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACCGTCTGATCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	72915202	72934108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ENSMUSG00000003037.17_72915203_72935122_1	chr8	+	1765	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	159	2626	0	-2626	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	2670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACCTGCCCTCCCCTGGA	NA	False	NA	22	True	ATTAAA	-19	NA	72915202	72935122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ENSMUSG00000003038.16_133692049_133695219_1	chr4	-	1166	6	NNC	ENSMUSG00000003038.16	novel	1265	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1124.41362496192	6399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTCTGATCTTTCCCA	NA	False	NA	NA	False	AATAAA	-25	NA	133695219	133692048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694101_133694267_133694313_133695105
ENSMUSG00000003038.16_133692049_133695219_2	chr4	-	1166	7	NNC	ENSMUSG00000003038.16	novel	1265	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1192.7979362267	7602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTCTGATCTTTCCCA	NA	False	NA	NA	False	AATAAA	-25	NA	133695219	133692048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_133692272_133692274_133692885_133693261_133693355_133693739_133693791_133694076_133694107_133694267_133694313_133695105
ENSMUSG00000003038.16_133692049_133695219_4	chr4	-	1178	6	FSM	ENSMUSG00000003038.16	ENSMUST00000100472.10	881	6	-15	-282	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1086.09951661899	7346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTCTGATCTTTCCCA	NA	False	NA	NA	False	AATAAA	-25	NA	133695219	133692048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694070_133694107_133694267_133694313_133695105
ENSMUSG00000003038.16_133692755_133695219_1	chr4	-	460	6	NNC	ENSMUSG00000003038.16	novel	1265	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	909.130001704927	1619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTTTTTTTTTAAGCT	NA	False	NA	NA	False	TATAAA	-17	NA	133695219	133692754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_133692879_133693261_133693358_133693739_133693791_133694076_133694107_133694267_133694313_133695105
ENSMUSG00000003038.16_133692755_133695219_2	chr4	-	460	6	NNC	ENSMUSG00000003038.16	novel	1265	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1124.41362496192	517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTTTTTTTTTAAGCT	NA	False	NA	NA	False	TATAAA	-17	NA	133695219	133692754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694101_133694267_133694313_133695105
ENSMUSG00000003038.16_133692755_133695219_3	chr4	-	472	6	FSM	ENSMUSG00000003038.16	ENSMUST00000100472.10	881	6	-15	424	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1086.09951661899	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTTTTTTTTTAAGCT	NA	False	NA	NA	False	TATAAA	-17	NA	133695219	133692754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694070_133694107_133694267_133694313_133695105
ENSMUSG00000003039.10_72973574_72976240_1	chr8	+	542	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	0	2022	0	-1034	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTTTGGTTTTGGGGT	NA	False	NA	11	True	ATTAAA	-18	NA	72973573	72976240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
ENSMUSG00000003039.10_72973574_72976867_1	chr8	+	1169	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	0	1395	0	-407	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	2637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGTGAATGTTGTCTG	NA	False	NA	15	True	AATAAA	-15	NA	72973573	72976867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
ENSMUSG00000003039.10_72973574_72977279_1	chr8	+	1581	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	0	983	0	5	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	3222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTGCGTGAAACAGATA	NA	False	NA	23	True	AATATA	-19	NA	72973573	72977279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
ENSMUSG00000003051.14_135181317_135186195_1	chr1	-	1973	9	NNC	ENSMUSG00000003051.14	novel	2095	9	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	217.346928894797	892	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCCTGAGCTCTCTGT	NA	False	NA	-10	True	AATAAA	-23	NA	135186195	135181316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_135182119_135182662_135182852_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135186086
ENSMUSG00000003051.14_135181317_135186195_2	chr1	-	1913	9	NNC	ENSMUSG00000003051.14	novel	1901	9	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	211.549011756141	763	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCCTGAGCTCTCTGT	NA	False	NA	-10	True	AATAAA	-23	NA	135186195	135181316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_135182119_135182662_135182852_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135184965_135185352_135185521_135186086
ENSMUSG00000003062.14_19541846_19579927_1	chr13	-	1284	9	NNC	ENSMUSG00000003062.14	novel	1327	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	269.359628331716	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	False	NA	0	True	AATAAA	-19	NA	19579927	19541845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_19542300_19543152_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ENSMUSG00000003062.14_19541846_19579927_2	chr13	-	1392	10	NNC	ENSMUSG00000003062.14	novel	1327	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	323.803705207604	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	False	NA	0	True	AATAAA	-19	NA	19579927	19541845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19578101_19578205_19579873
ENSMUSG00000003062.14_19549126_19579927_1	chr13	-	1274	9	NNC	ENSMUSG00000003062.14	novel	1128	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	340.955069437309	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCATGCCCCTGCTTT	NA	False	NA	-3	True	AATAAA	-18	NA	19579927	19549125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_19549516_19549601_19549725_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ENSMUSG00000003099.12_16738565_16761748_1	chr7	-	1965	12	NNC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	330.637350962107	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCTCGACGTGTGTCCA	NA	False	NA	-3	True	AATAAA	-37	NA	16761748	16738564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_16739097_16739185_16739268_16739984_16740191_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
ENSMUSG00000003099.12_16738565_16761748_2	chr7	-	1539	13	NNC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	316.64157795351	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCTCGACGTGTGTCCA	NA	False	NA	-3	True	AATAAA	-37	NA	16761748	16738564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_16738657_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
ENSMUSG00000003131.8_45876613_45896127_1	chr9	-	4195	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	222	2456	-2	-2456	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGATGTCTGTTTCTT	4134	False	NA	-3	True	TATAAA	-21	NA	45896127	45876612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ENSMUSG00000003131.8_45877620_45896127_1	chr9	-	3188	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	222	3463	-2	2362	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGGAGTCCACTGTCAT	4134	False	NA	-1	True	AATAAA	-25	NA	45896127	45877619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ENSMUSG00000003131.8_45879503_45896127_1	chr9	-	1305	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	222	5346	-2	479	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGGAGATGCTATAGTTA	4134	False	NA	-21	True	ATTAAA	-18	NA	45896127	45879502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ENSMUSG00000003134.11_39407010_39410574_1	chr1	-	544	5	NIC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	940	3563	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	99050	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCCCAAGTAGGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	39410574	39407009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ENSMUSG00000003153.11_122704785_122719481_1	chr6	-	3719	10	FSM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	223	17	0	0	multi-exon	FALSE	canonical	3	8407	junction_1	739.604699221896	8402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8913	False	NA	-21	True	AATAAA	-12	NA	122719481	122704784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ENSMUSG00000003153.11_122706100_122719481_1	chr6	-	2404	10	FSM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	223	1332	0	790	multi-exon	FALSE	canonical	3	8407	junction_1	739.604699221896	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCTTTGTAGTTAGTGA	8913	False	NA	NA	False	ACTAAA	-20	NA	122719481	122706099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ENSMUSG00000003153.11_122716097_122719481_1	chr6	-	1096	3	ISM	ENSMUSG00000003153.11	ENSMUST00000168801.2	418	4	398	-754	0	695	3prime_fragment	FALSE	canonical	3	10026	junction_1	359.5	16262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATGTGGAAAATGTAAAT	8913	False	NA	NA	False	NA	NA	NA	122719481	122716096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_122716953_122717346_122717440_122719334
ENSMUSG00000003166.21_17667175_17709535_1	chr16	-	1481	7	ISM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	-11	8956	-11	0	5prime_fragment	FALSE	canonical	3	236	junction_4	83.6932228770977	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTTACGTGTGCATTTG	NA	False	NA	69	True	NA	NA	NA	17709535	17667174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ENSMUSG00000003190.13_44640646_44646677_1	chr7	-	1219	6	ISM	ENSMUSG00000003190.13	ENSMUST00000003290.12	1075	7	326	0	0	0	3prime_fragment	FALSE	canonical	3	119	junction_2	19.0326036053925	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	44646677	44640645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_44640879_44642167_44642456_44643603_44643696_44643786_44643874_44645967_44646111_44646301
ENSMUSG00000003190.13_44640646_44646994_1	chr7	-	1032	7	NNC	ENSMUSG00000003190.13	novel	1596	8	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	71.3271025316153	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	44646994	44640645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_44640879_44642167_44642456_44643234_44643293_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ENSMUSG00000003190.13_44640646_44646994_2	chr7	-	686	5	NIC	ENSMUSG00000003190.13	novel	1075	7	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	66.4115953730973	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	44646994	44640645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_44640879_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ENSMUSG00000003190.13_44640646_44646994_3	chr7	-	778	6	NIC	ENSMUSG00000003190.13	novel	1075	7	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	60.7730203297483	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	44646994	44640645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_44640879_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ENSMUSG00000003190.13_44647090_44651814_1	chr7	-	1349	8	Genic_Genomic	ENSMUSG00000003190.13	novel	1596	8	NA	NA	-3678	-1123	multi-exon	FALSE	non_canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGGCCTTCCGCCTAC	NA	False	NA	NA	False	NA	NA	NA	44651814	44647089	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650241_44651096_44651213_44651587
ENSMUSG00000003190.13_44647090_44651814_2	chr7	-	1555	8	Genic_Genomic	ENSMUSG00000003190.13	novel	1596	8	NA	NA	-3678	-1123	multi-exon	FALSE	non_canonical	0	0	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGGCCTTCCGCCTAC	NA	False	NA	NA	False	NA	NA	NA	44651814	44647089	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
ENSMUSG00000003199.17_56316231_56323662_1	chr17	+	1286	12	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	0	9	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	267.709507050626	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAAGCCTGTGGCTGGGG	NA	False	NA	18	True	AATAAA	-18	NA	56316230	56323662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_56316257_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ENSMUSG00000003200.11_56316514_56323790_1	chr17	-	1461	12	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	19778	7236	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGCCTCGTGAGCGCGCC	NA	False	NA	NA	False	NA	NA	NA	56323790	56316513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ENSMUSG00000003200.11_56323750_56343568_1	chr17	-	2083	9	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	585	junction_1	56.6192050014834	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343568	56323749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ENSMUSG00000003200.11_56323750_56343568_2	chr17	-	2006	10	FSM	ENSMUSG00000003200.11	ENSMUST00000003268.11	2073	10	67	0	0	0	multi-exon	FALSE	canonical	3	585	junction_1	54.5914116159513	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343568	56323749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ENSMUSG00000003200.11_56323750_56343635_1	chr17	-	2150	9	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	585	junction_1	56.6192050014834	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343635	56323749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ENSMUSG00000003234.17_20367426_20379568_1	chr16	+	2430	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	99	561	0	0	multi-exon	FALSE	canonical	3	293	junction_13	17.6705970470723	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTTGCCTCTCTGCTC	NA	False	NA	4	True	ATTAAA	-13	NA	20367425	20379568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ENSMUSG00000003235.14_20317567_20328073_1	chr16	+	2499	17	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	740.218271757561	1534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317566	20328073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_20317708_20317762_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ENSMUSG00000003235.14_20317567_20328073_2	chr16	+	2488	17	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	740.218271757561	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317566	20328073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_20317700_20317765_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ENSMUSG00000003271.18_45379407_45399239_1	chr7	-	1092	7	NNC	ENSMUSG00000003271.18	novel	1193	7	NA	NA	-7069	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	2.80871659105879	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCTCTGTGCTGACT	7767	False	NA	NA	False	AATAAA	-17	NA	45399239	45379406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_45379624_45380661_45380843_45383042_45383138_45383410_45383538_45384558_45384768_45391477_45391621_45399119
ENSMUSG00000003271.18_45379424_45399333_1	chr7	-	1169	7	NNC	ENSMUSG00000003271.18	novel	1193	7	NA	NA	-7163	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	2.80871659105879	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATCACTCCAACCACTC	7673	False	NA	NA	False	NA	NA	NA	45399333	45379423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_45379624_45380661_45380843_45383042_45383138_45383410_45383538_45384558_45384768_45391477_45391621_45399119
ENSMUSG00000003279.18_71125668_71137048_1	chr17	+	649	3	NNC	ENSMUSG00000003279.18	novel	1738	3	NA	NA	9601	8640	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGATGCTTTGATTTAA	NA	False	NA	NA	False	NA	NA	NA	71125667	71137048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_71125929_71126393_71126694_71136960
ENSMUSG00000003283.16_152949583_152993361_1	chr2	+	2164	13	NNC	ENSMUSG00000003283.16	novel	2090	13	NA	NA	-805	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	20.5877188310572	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCAGCTTCTCTGTCTCC	NA	False	NA	19	True	AATAAA	-29	NA	152949582	152993361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_152949942_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152973245_152975988_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
ENSMUSG00000003299.11_20914214_20920127_1	chr9	+	1091	9	NNC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	336.318301613219	3639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914213	20920127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918738_20918837_20918926_20919037_20919118_20919196_20919789
ENSMUSG00000003299.11_20914214_20920127_2	chr9	+	1100	9	FSM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	180	8	0	0	multi-exon	FALSE	canonical	3	832	junction_5	79.3851371479574	4452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914213	20920127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919037_20919118_20919196_20919789
ENSMUSG00000003299.11_20914214_20920127_3	chr9	+	1182	8	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	832	junction_5	84.7158515875517	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914213	20920127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919196_20919789
ENSMUSG00000003299.11_20914214_20920127_4	chr9	+	1092	9	NNC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	333.559870937737	4289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914213	20920127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919029_20919118_20919196_20919789
ENSMUSG00000003299.11_20914214_20920127_5	chr9	+	1012	9	NIC	ENSMUSG00000003299.11	novel	815	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	127	junction_5	294.9804813458	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914213	20920127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918153_20918729_20918837_20918926_20919037_20919118_20919196_20919789
ENSMUSG00000003355.8_98622247_98625470_1	chr15	-	602	5	NNC	ENSMUSG00000003355.8	novel	734	6	NA	NA	551	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	286.193116618831	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTATTTTTCACTCGGT	NA	False	NA	NA	False	AATAAA	-19	NA	98625470	98622246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091_98625180_98625298
ENSMUSG00000003363.16_27231425_27252459_1	chr7	-	2104	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	178	0	-18	0	multi-exon	FALSE	canonical	3	277	junction_13	66.1410542194063	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATGAGATGGTATGTT	NA	False	NA	1	True	AGTAAA	-31	NA	27252459	27231424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
ENSMUSG00000003363.16_27231425_27252459_2	chr7	-	2029	13	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	130.304211367093	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATGAGATGGTATGTT	NA	False	NA	1	True	AGTAAA	-31	NA	27252459	27231424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27252422
ENSMUSG00000003363.16_27231425_27252459_3	chr7	-	2127	14	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	126.954541554455	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATGAGATGGTATGTT	NA	False	NA	1	True	AGTAAA	-31	NA	27252459	27231424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244711_27252422
ENSMUSG00000003380.12_24669186_24672100_1	chr7	-	802	5	NNC	ENSMUSG00000003380.12	novel	899	5	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	321.680256621385	2242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCCAATACTTTCCT	4574	False	NA	-14	True	AATAAA	-15	NA	24672100	24669185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_24669435_24669511_24669614_24671185_24671284_24671535_24671740_24671951
ENSMUSG00000003380.12_24669186_24672100_2	chr7	-	767	5	NIC	ENSMUSG00000003380.12	novel	899	5	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_1	304.184462949704	1841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCCAATACTTTCCT	4574	False	NA	-14	True	AATAAA	-15	NA	24672100	24669185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_24669391_24669511_24669614_24671185_24671284_24671526_24671740_24671951
ENSMUSG00000003402.15_21914314_21925518_1	chr9	+	2006	18	NNC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_3	221.845499403383	1883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	20	True	AATAAA	-16	NA	21914313	21925518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915799_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ENSMUSG00000003411.11_108736260_108798102_1	chr4	+	908	5	FSM	ENSMUSG00000003411.11	ENSMUST00000106650.9	3327	5	0	2419	0	0	multi-exon	FALSE	canonical	3	36	junction_4	5.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGCCAGCCCCTGCG	NA	False	NA	NA	False	NA	NA	NA	108736259	108798102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_108736416_108747504_108747733_108781102_108781222_108786598_108786724_108797822
ENSMUSG00000003411.11_108736260_108798385_1	chr4	+	1191	5	FSM	ENSMUSG00000003411.11	ENSMUST00000106650.9	3327	5	0	2136	0	0	multi-exon	FALSE	canonical	3	36	junction_4	5.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGCTTGTTTCCTATC	NA	False	NA	7	True	ATTAAA	-18	NA	108736259	108798385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_108736416_108747504_108747733_108781102_108781222_108786598_108786724_108797822
ENSMUSG00000003420.9_44742488_44755965_1	chr7	-	1794	8	NNC	ENSMUSG00000003420.9	novel	1770	7	NA	NA	-2690	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	25.6515106767613	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTGTGTGCATCGTT	NA	False	NA	-7	True	CATAAA	-10	NA	44755965	44742487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751837_44752096_44752426_44752698_44753063_44753189_44755780
ENSMUSG00000003420.9_44752259_44755965_1	chr7	-	749	3	NNC	ENSMUSG00000003420.9	novel	595	2	NA	NA	-2690	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	41.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTCGTCTCTGTGTCCGT	NA	False	NA	NA	False	AATACA	-13	NA	44755965	44752258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_44752698_44753063_44753189_44755780
ENSMUSG00000003421.14_44711853_44726840_1	chr7	+	1041	9	NIC	ENSMUSG00000003421.14	novel	972	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	158.639479244607	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCCTGGCGCCTCATTG	3058	False	NA	27	True	AATAAA	-18	NA	44711852	44726840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724106_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ENSMUSG00000003421.14_44711920_44727206_3	chr7	+	1346	9	FSM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	40	428	0	366	multi-exon	FALSE	canonical	3	417	junction_1	63.7582102556212	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCCAGCCCCCTTAAACT	3125	False	NA	-74	True	NA	NA	NA	44711919	44727206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ENSMUSG00000003421.14_44711920_44727634_1	chr7	+	1768	9	NIC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	158.639479244607	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTTGTTGTTTTATT	3125	False	NA	25	True	NA	NA	NA	44711919	44727634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724106_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ENSMUSG00000003421.14_44711920_44727634_3	chr7	+	1699	9	FSM	ENSMUSG00000003421.14	ENSMUST00000107829.9	972	9	67	-794	0	0	multi-exon	FALSE	canonical	3	37	junction_6	164.802912595621	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTTGTTGTTTTATT	3125	False	NA	25	True	NA	NA	NA	44711919	44727634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44726050_44726164_44726244_44726354_44726735
ENSMUSG00000003423.16_44805253_44809483_1	chr7	+	970	10	NIC	ENSMUSG00000003423.16	novel	548	7	NA	NA	-114	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	120.254360050316	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAGCTCCAGACAATGA	NA	False	NA	15	True	AATAAA	-15	NA	44805252	44809483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_44805270_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ENSMUSG00000003423.16_44805253_44809483_3	chr7	+	1107	10	NNC	ENSMUSG00000003423.16	novel	1072	10	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	119.017687242457	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAGCTCCAGACAATGA	NA	False	NA	15	True	AATAAA	-15	NA	44805252	44809483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_44805407_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ENSMUSG00000003423.16_44805253_44809483_4	chr7	+	1180	10	FSM	ENSMUSG00000003423.16	ENSMUST00000107811.4	1072	10	-114	6	-114	0	multi-exon	FALSE	canonical	3	17	junction_1	115.619106456406	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAGCTCCAGACAATGA	NA	False	NA	15	True	AATAAA	-15	NA	44805252	44809483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44805480_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ENSMUSG00000003429.12_44771857_44773759_1	chr7	-	503	5	FSM	ENSMUSG00000003429.12	ENSMUST00000003521.10	661	5	104	54	0	0	multi-exon	FALSE	canonical	3	18027	junction_3	5229.01092463957	5064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCTGGCCAATGCCCTA	NA	False	NA	-55	True	NA	NA	NA	44773759	44771856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772975_44773720
ENSMUSG00000003435.10_28014316_28038171_1	chr7	-	3531	29	NIC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_25	152.559502443192	1970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACGAAGAGTTTTCTT	NA	False	NA	-8	True	AATAAA	-21	NA	28038171	28014315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28030004_28030071_28030794_28030955_28037776_28037861_28038119
ENSMUSG00000003438.18_28005249_28011364_1	chr7	-	1074	11	FSM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	133	308	0	0	multi-exon	FALSE	canonical	3	2125	junction_9	150.487341660354	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2789	False	NA	-2	True	AATAAA	-19	NA	28011364	28005248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ENSMUSG00000003438.18_28005249_28011471_1	chr7	-	1181	11	FSM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	26	308	-9	0	multi-exon	FALSE	canonical	3	2125	junction_9	150.487341660354	1271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2682	False	NA	-2	True	AATAAA	-19	NA	28011471	28005248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ENSMUSG00000003438.18_28005249_28011471_2	chr7	-	1168	10	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	755.088188782943	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2682	False	NA	-2	True	AATAAA	-19	NA	28011471	28005248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009711_28009753_28010293_28010445_28011349
ENSMUSG00000003438.18_28005249_28011471_3	chr7	-	1170	9	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	800.856065407511	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2682	False	NA	-2	True	AATAAA	-19	NA	28011471	28005248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28010250_28010445_28011349
ENSMUSG00000003444.9_28086161_28092133_1	chr7	-	691	4	FSM	ENSMUSG00000003444.9	ENSMUST00000003536.9	1281	4	0	590	0	-590	multi-exon	FALSE	canonical	3	529	junction_2	10.3387082795139	2417	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGGTTCCTGTTGCTGA	NA	False	NA	-19	True	AATGAA	-19	NA	28092133	28086160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28086450_28090236_28090322_28090514_28090574_28091875
ENSMUSG00000003458.13_171893580_171910260_1	chr1	-	2799	17	FSM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	102	0	102	0	multi-exon	FALSE	canonical	3	465	junction_8	31.8580224394108	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGTTTGGTATTCTTC	9098	False	NA	50	True	ATTAAA	-21	NA	171910260	171893579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ENSMUSG00000003464.14_171954329_171962850_1	chr1	+	1860	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	126.880950146994	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGTTATTTTTCATC	NA	False	NA	24	True	AATAAA	-14	NA	171954328	171962850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ENSMUSG00000003464.14_171954329_171963336_1	chr1	+	2346	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	0	486	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	126.880950146994	1000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGAGTCACTTCGAGT	NA	False	NA	14	True	AAGAAA	-11	NA	171954328	171963336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ENSMUSG00000003464.14_171954329_171963336_2	chr1	+	2396	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	7	-486	0	486	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGAGTCACTTCGAGT	NA	False	NA	14	True	AAGAAA	-11	NA	171954328	171963336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ENSMUSG00000003518.14_101864295_101875604_1	chr11	-	1865	3	FSM	ENSMUSG00000003518.14	ENSMUST00000003612.13	4212	3	21	2326	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACGTTCTCATTATT	NA	False	NA	NA	False	NA	NA	NA	101875604	101864294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_101865766_101872442_101872670_101875437
ENSMUSG00000003526.13_17889589_17907027_1	chr16	-	2257	14	FSM	ENSMUSG00000003526.13	ENSMUST00000003620.13	2386	14	129	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	13.1900087703135	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTCTCTTGGTACCT	8072	False	NA	0	True	AATAAA	-20	NA	17907027	17889588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906751
ENSMUSG00000003528.16_17743087_17745751_1	chr16	-	1516	9	NNC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_8	623.222021032633	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	-21	True	AATAAA	-16	NA	17745751	17743086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745667
ENSMUSG00000003531.16_17884307_17889207_1	chr16	+	1053	5	NNC	ENSMUSG00000003531.16	novel	1050	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	187.78894403026	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCTGTGCTACCTAG	NA	False	NA	10	True	AATAAA	-16	NA	17884306	17889207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_17884464_17884559_17884721_17887287_17887389_17887927_17888096_17888741
ENSMUSG00000003549.10_19079032_19090449_1	chr7	+	1053	10	NNC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	21	junction_8	110.932857014647	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1040	False	NA	15	True	AATAAA	-20	NA	19079031	19090449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089105_19089217_19089287_19090343
ENSMUSG00000003549.10_19079032_19090449_2	chr7	+	1038	10	NNC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	117.810058469314	637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1040	False	NA	15	True	AATAAA	-20	NA	19079031	19090449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090351
ENSMUSG00000003549.10_19079032_19090449_3	chr7	+	1046	10	FSM	ENSMUSG00000003549.10	ENSMUST00000003645.9	1375	10	329	0	0	0	multi-exon	FALSE	canonical	3	315	junction_9	39.5851948880006	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1040	False	NA	15	True	AATAAA	-20	NA	19079031	19090449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
ENSMUSG00000003559.9_46695897_46729526_1	chr19	+	1774	12	NNC	ENSMUSG00000003559.9	novel	1736	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_11	66.6961780410936	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATACCACAATGGATGTC	5974	False	NA	22	True	AATAAA	-32	NA	46695896	46729526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46726951_46726998_46728899
ENSMUSG00000003573.16_70746101_70755121_1	chr8	+	1526	13	NNC	ENSMUSG00000003573.16	novel	2608	10	NA	NA	2375	8110	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1279	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCGGCGCGTGAATGCT	2989	False	NA	NA	False	NA	NA	NA	70746100	70755121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_70746338_70746477_70746550_70746648_70746738_70747336_70747404_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
ENSMUSG00000003573.16_70746101_70755121_2	chr8	+	906	9	NNC	ENSMUSG00000003573.16	novel	2323	9	NA	NA	2375	8110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCGGCGCGTGAATGCT	2989	False	NA	NA	False	NA	NA	NA	70746100	70755121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749609_70754995
ENSMUSG00000003575.14_70856963_70892267_1	chr8	-	958	5	NNC	ENSMUSG00000003575.14	novel	870	4	NA	NA	-38	536	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	29.1247317584214	70	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATAGTAACTGCACACA	5175	False	NA	-15	True	NA	NA	NA	70892267	70856962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_70857419_70857908_70857971_70858727_70858866_70861544_70861662_70892082
ENSMUSG00000003644.18_133574605_133592444_1	chr4	-	2159	12	ISM	ENSMUSG00000003644.18	ENSMUST00000157067.9	2637	20	7180	-531	-4091	0	3prime_fragment	FALSE	canonical	3	996	junction_6	94.9394761531335	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	9454	False	NA	-9	True	AATAAA	-14	NA	133592444	133574604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335
ENSMUSG00000003657.10_110869170_110879699_1	chr8	-	1145	9	NNC	ENSMUSG00000003657.10	novel	1431	11	NA	NA	15139	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_8	57.2319840648566	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCACCCGTTTCTTGTCG	NA	False	NA	-12	True	AATAAA	-22	NA	110879699	110869169	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110879655
ENSMUSG00000003660.11_127071475_127082371_1	chr2	+	3216	20	ISM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	21156	0	-7254	0	3prime_fragment	FALSE	canonical	3	630	junction_1	89.4388786791884	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCCTTAACAGTGATAC	797	False	NA	15	True	AATAAA	-17	NA	127071474	127082371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ENSMUSG00000003662.11_127084540_127089736_1	chr2	-	1386	7	NNC	ENSMUSG00000003662.11	novel	3075	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.821733611005	841	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGATTTAGGGCATGGTG	NA	False	NA	-13	True	ATTAAA	-6	NA	127089736	127084539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_127084958_127086832_127086921_127087642_127087838_127088332_127088422_127088521_127088634_127088929_127089079_127089401
ENSMUSG00000003662.11_127084540_127089736_2	chr2	-	1393	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	0	1682	0	0	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGATTTAGGGCATGGTG	NA	False	NA	-13	True	ATTAAA	-6	NA	127089736	127084539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
ENSMUSG00000003721.15_121232082_121255482_1	chr1	-	2359	6	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	70.4346505634833	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTCCTTTTTATTC	NA	False	NA	-1	True	ATTAAA	-17	NA	121255482	121232081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247635_121255419
ENSMUSG00000003721.15_121232082_121255482_2	chr1	-	2426	6	FSM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	271	0	-7	0	multi-exon	FALSE	canonical	3	166	junction_4	17.805617091244	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTCCTTTTTATTC	NA	False	NA	-1	True	ATTAAA	-17	NA	121255482	121232081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247702_121255419
ENSMUSG00000003721.15_121233424_121255482_1	chr1	-	1084	6	FSM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	271	1342	-7	0	multi-exon	FALSE	canonical	3	166	junction_4	17.805617091244	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCGCTACATGAAAGATATG	NA	False	NA	NA	False	AATAAA	-14	NA	121255482	121233423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247702_121255419
ENSMUSG00000003762.14_26932638_26957370_1	chr7	+	2095	15	NNC	ENSMUSG00000003762.14	novel	2276	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	26.4262547247148	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTTCTTTTCTCTCTG	NA	False	NA	17	True	AATAAA	-17	NA	26932637	26957370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_26932708_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ENSMUSG00000003778.15_34732883_34757627_1	chr18	-	3226	22	FSM	ENSMUSG00000003778.15	ENSMUST00000003876.10	4468	22	27	1215	-20	0	multi-exon	FALSE	canonical	3	307	junction_21	99.9950565671548	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757627	34732882	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ENSMUSG00000003778.15_34742203_34757627_1	chr18	-	1679	10	ISM	ENSMUSG00000003778.15	ENSMUST00000115765.2	3869	21	27	7975	-20	1112	5prime_fragment	FALSE	canonical	3	307	junction_9	64.5118421514824	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGATTAATATTTTGAA	NA	False	NA	NA	False	NA	NA	NA	34757627	34742202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_-_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ENSMUSG00000003779.17_34758060_34765858_1	chr18	+	2924	19	NNC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	0	0	intron_retention	FALSE	canonical	1	5	junction_9	259.76530836911	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	6249	False	NA	23	True	AATAAA	-20	NA	34758059	34765858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761943_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUSG00000003779.17_34758060_34765858_2	chr18	+	2786	18	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_10	266.201994226384	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	6249	False	NA	23	True	AATAAA	-20	NA	34758059	34765858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUSG00000003779.17_34758060_34765858_3	chr18	+	2930	19	FSM	ENSMUSG00000003779.17	ENSMUST00000237407.2	3674	19	272	472	0	0	multi-exon	FALSE	canonical	3	938	junction_13	99.0044268869321	1782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	6249	False	NA	23	True	AATAAA	-20	NA	34758059	34765858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUSG00000003808.19_85583618_85595886_1	chr8	+	1820	13	NNC	ENSMUSG00000003808.19	novel	1826	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	186.69945768534	1534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTGTCATTCATTTCA	NA	False	NA	38	True	AATAAA	-38	NA	85583617	85595886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594011_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ENSMUSG00000003808.19_85587616_85595885_1	chr8	+	1548	12	ISM	ENSMUSG00000003808.19	ENSMUST00000109754.2	1795	13	3970	1	3967	0	3prime_fragment	FALSE	canonical	3	15	junction_8	184.626896494229	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85587615	85595885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594381_85594548_85594637_85594716_85594852_85594968_85595494
ENSMUSG00000003809.15_85613216_85620413_1	chr8	-	1778	11	NNC	ENSMUSG00000003809.15	novel	2114	12	NA	NA	133	-194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	83.4652023300729	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGGACTGGACTAGGT	NA	False	NA	-13	True	AATAAA	-15	NA	85620413	85613215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620161_85620314_85620370
ENSMUSG00000003812.14_85635319_85637926_1	chr8	+	1413	6	FSM	ENSMUSG00000003812.14	ENSMUST00000003910.13	1715	6	130	172	0	-164	multi-exon	FALSE	canonical	3	65	junction_4	11.7711511756497	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCGGCTCAGGTGGATC	NA	False	NA	NA	False	NA	NA	NA	85635318	85637926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314
ENSMUSG00000003812.14_85635319_85638090_1	chr8	+	1431	7	NNC	ENSMUSG00000003812.14	novel	4073	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	34.0864912962436	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACTAGTTTTGACTTGA	NA	False	NA	10	True	NA	NA	NA	85635318	85638090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314_85637819_85637964
ENSMUSG00000003812.14_85635319_85638111_1	chr8	+	821	6	NNC	ENSMUSG00000003812.14	novel	1715	6	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	35.9410628668658	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTGTGTCTGTTGG	NA	False	NA	31	True	NA	NA	NA	85635318	85638111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636472_85637964
ENSMUSG00000003812.14_85635360_85638111_1	chr8	+	1557	6	FSM	ENSMUSG00000003812.14	ENSMUST00000003910.13	1715	6	171	-13	0	13	multi-exon	FALSE	canonical	3	65	junction_4	11.7711511756497	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTGTGTCTGTTGG	NA	False	NA	31	True	NA	NA	NA	85635359	85638111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314
ENSMUSG00000003812.14_85635360_85638111_2	chr8	+	1411	7	NNC	ENSMUSG00000003812.14	novel	4073	7	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	34.0864912962436	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTGTGTCTGTTGG	NA	False	NA	31	True	NA	NA	NA	85635359	85638111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314_85637819_85637964
ENSMUSG00000003812.14_85635360_85638338_1	chr8	+	1638	7	NNC	ENSMUSG00000003812.14	novel	4073	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	34.0864912962436	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTAACCTTTTTCTTAAG	NA	False	NA	10	True	AATACA	-20	NA	85635359	85638338	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314_85637819_85637964
ENSMUSG00000003812.14_85640020_85640944_1	chr8	+	392	2	ISM	ENSMUSG00000003812.14	ENSMUST00000128400.2	4073	7	4670	206	0	-206	3prime_fragment	FALSE	canonical	3	74	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTGTTGGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	85640019	85640944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_85640158_85640690
ENSMUSG00000003812.14_85640020_85641150_1	chr8	+	598	2	ISM	ENSMUSG00000003812.14	ENSMUST00000128400.2	4073	7	4670	0	0	0	3prime_fragment	FALSE	canonical	3	74	junction_1	0	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTCTCTTTCATCTAG	NA	False	NA	NA	False	NA	NA	NA	85640019	85641150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_85640158_85640690
ENSMUSG00000003812.14_85640020_85641150_2	chr8	+	689	2	NNC	ENSMUSG00000003812.14	novel	1118	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	0	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTCTCTTTCATCTAG	NA	False	NA	NA	False	NA	NA	NA	85640019	85641150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85640158_85640599
ENSMUSG00000003812.14_85640020_85649547_1	chr8	+	1144	3	NNC	ENSMUSG00000003812.14	novel	1118	3	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	44.5	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGAGTGGGGGTGTTT	NA	False	NA	7	True	AATAAA	-19	NA	85640019	85649547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85640158_85646999_85647134_85648675
ENSMUSG00000003813.16_85562106_85567274_1	chr8	-	1256	9	FSM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	20	566	-4	143	multi-exon	FALSE	canonical	3	614	junction_3	246.139156525328	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATATATATTCATGTTTA	NA	False	NA	NA	False	NA	NA	NA	85567274	85562105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ENSMUSG00000003814.9_85568720_85573498_1	chr8	-	1381	10	NNC	ENSMUSG00000003814.9	novel	2184	9	NA	NA	-39	-241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	417.113360557482	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTCTCCTTCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	85573498	85568719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_85568796_85569292_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ENSMUSG00000003814.9_85568720_85573498_2	chr8	-	1442	10	NNC	ENSMUSG00000003814.9	novel	2184	9	NA	NA	-39	-241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	417.113360557482	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTCTCCTTCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	85573498	85568719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_85568796_85569231_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ENSMUSG00000003814.9_85568720_85573498_3	chr8	-	1785	8	NIC	ENSMUSG00000003814.9	novel	2184	9	NA	NA	-39	-241	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	441.872268920348	6369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTCTCCTTCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	85573498	85568719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_85569474_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ENSMUSG00000003814.9_85568720_85573498_4	chr8	-	1883	9	NNC	ENSMUSG00000003814.9	novel	2184	9	NA	NA	-39	-241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	442.228147425059	6971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTCTCCTTCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	85573498	85568719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573331
ENSMUSG00000003814.9_85568720_85573498_5	chr8	-	1641	7	NIC	ENSMUSG00000003814.9	novel	2184	9	NA	NA	-39	-241	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	471.464886167452	1519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTCTCCTTCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	85573498	85568719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_85569474_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ENSMUSG00000003814.9_85568720_85573638_1	chr8	-	2018	9	FSM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	-75	241	-75	-241	multi-exon	FALSE	canonical	3	1093	junction_6	113.438791314964	7180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTCTCCTTCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	85573638	85568719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ENSMUSG00000003824.13_85598822_85614075_1	chr8	+	668	4	NNC	ENSMUSG00000003824.13	novel	685	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	824.515615376689	1801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGGCTGGTCCTTT	NA	False	NA	81	True	NA	NA	NA	85598821	85614075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85598883_85599348_85599462_85612570_85612753_85613763
ENSMUSG00000003824.13_85598822_85614075_3	chr8	+	829	5	FSM	ENSMUSG00000003824.13	ENSMUST00000136026.8	1686	5	82	775	0	0	multi-exon	FALSE	canonical	3	1047	junction_2	374.154045815357	2767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGGCTGGTCCTTT	NA	False	NA	81	True	NA	NA	NA	85598821	85614075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85598883_85599348_85599462_85610059_85610214_85612563_85612753_85613763
ENSMUSG00000003824.13_85598822_85614075_4	chr8	+	847	5	FSM	ENSMUSG00000003824.13	ENSMUST00000170296.2	929	5	82	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	678.634428466461	1705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGGCTGGTCCTTT	NA	False	NA	81	True	NA	NA	NA	85598821	85614075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85598883_85599330_85599462_85610059_85610214_85612563_85612753_85613763
ENSMUSG00000003848.15_108139118_108151673_1	chr8	-	2396	8	NIC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	448	junction_3	29.242825737997	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTGTTTTATTTGGG	NA	False	NA	0	True	AATAAA	-17	NA	108151673	108139117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_108139816_108142737_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
ENSMUSG00000003848.15_108139118_108151673_2	chr8	-	1639	9	NIC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	161.008540146167	2197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTGTTTTATTTGGG	NA	False	NA	0	True	AATAAA	-17	NA	108151673	108139117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151383_108151503_108151597
ENSMUSG00000003848.15_108139235_108151673_1	chr8	-	1536	9	FSM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	8	114	0	-114	multi-exon	FALSE	canonical	3	419	junction_2	34.7902195307819	1902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTTTAAGTTCTCGT	NA	False	NA	-9	True	AATAAA	-16	NA	108151673	108139234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
ENSMUSG00000003863.19_44988697_44993066_1	chr7	-	1598	8	ISM	ENSMUSG00000003863.19	ENSMUST00000211067.2	4565	30	23072	147	-2482	0	3prime_fragment	FALSE	canonical	3	8	junction_7	19.3422451897289	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGGTGACCAGCCTTT	4504	False	NA	0	True	NA	NA	NA	44993066	44988696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44992976
ENSMUSG00000003865.17_45097029_45106043_1	chr7	+	2210	7	NIC	ENSMUSG00000003865.17	novel	480	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	83.740505266103	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTGGACATAAGCTC	NA	False	NA	25	True	AATACA	-21	NA	45097028	45106043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_45097078_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ENSMUSG00000003868.15_45071322_45083704_1	chr7	-	1491	15	FSM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	343	0	-3	0	multi-exon	FALSE	canonical	3	1951	junction_14	206.139144605714	6744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGCTGTGTCCTCAG	-16	True	NA	-4	True	TATAAA	-15	NA	45083704	45071321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ENSMUSG00000003868.15_45071322_45083704_2	chr7	-	1577	14	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-3	0	intron_retention	FALSE	canonical	3	1951	junction_13	209.501917066259	6034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGCTGTGTCCTCAG	-16	True	NA	-4	True	TATAAA	-15	NA	45083704	45071321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ENSMUSG00000003868.15_45071322_45084064_1	chr7	-	1588	16	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_15	624.837258812245	6883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGCTGTGTCCTCAG	9165	False	NA	-4	True	TATAAA	-15	NA	45084064	45071321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675_45083781_45084043
ENSMUSG00000003873.12_45111121_45115901_1	chr7	-	912	5	ISM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	359	0	298	0	3prime_fragment	FALSE	canonical	3	256	junction_1	1275.81591540473	4876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCCCTTGTCCGCCCA	10002	False	NA	-2	True	AATAAA	-22	NA	45115901	45111120	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_45111387_45112822_45112928_45114612_45114749_45115400_45115548_45115643
ENSMUSG00000003873.12_45111121_45116255_1	chr7	-	1266	5	ISM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	5	0	0	0	intron_retention	FALSE	canonical	3	256	junction_1	1275.81591540473	5163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCCCTTGTCCGCCCA	9982	False	NA	-2	True	AATAAA	-22	NA	45116255	45111120	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_45111387_45112822_45112928_45114612_45114749_45115400_45115548_45115643
ENSMUSG00000003923.15_71061294_71073911_1	chr10	-	3968	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	199	0	199	0	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTGTTTTTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	71073911	71061293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
ENSMUSG00000003923.15_71062231_71073849_1	chr10	-	567	5	NNC	ENSMUSG00000003923.15	novel	4167	7	NA	NA	261	-937	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	165.640235148348	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTCCATGTCCTGTT	NA	False	NA	NA	False	AAAACA	-22	NA	71073849	71062230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_71062277_71070690_71070845_71071372_71071444_71072745_71072862_71073669
ENSMUSG00000003923.15_71063766_71073508_1	chr10	-	1475	7	FSM	ENSMUSG00000003923.15	ENSMUST00000121685.8	899	7	0	-576	0	510	multi-exon	FALSE	canonical	1	9	junction_6	143.827056641726	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTCTGAAATTATGTA	NA	False	NA	-10	True	AATAAA	-18	NA	71073508	71063765	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073287
ENSMUSG00000003923.15_71063766_71073911_1	chr10	-	1496	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	199	2472	199	510	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	1502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTCTGAAATTATGTA	NA	False	NA	-10	True	AATAAA	-18	NA	71073911	71063765	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
ENSMUSG00000003929.12_33552663_33577852_1	chr17	-	2292	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	0	4347	0	684	multi-exon	FALSE	canonical	3	29	junction_3	5.43650214343336	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTGCCTGTTTTTTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	33577852	33552662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
ENSMUSG00000003929.12_33552882_33577852_2	chr17	-	2073	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	0	4566	0	465	multi-exon	FALSE	canonical	3	29	junction_3	5.43650214343336	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTCATTACATTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	33577852	33552881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
ENSMUSG00000004018.10_26337202_26421430_1	chr11	+	1206	14	NNC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.488835253241	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTGATGACTTCAGAG	NA	False	NA	12	True	AATAAA	-19	NA	26337201	26421430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_26337311_26347750_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ENSMUSG00000004018.10_26337202_26421430_2	chr11	+	1211	14	FSM	ENSMUSG00000004018.10	ENSMUST00000004120.9	2724	14	1067	446	0	0	multi-exon	FALSE	canonical	3	204	junction_1	21.2544461064019	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTGATGACTTCAGAG	NA	False	NA	12	True	AATAAA	-19	NA	26337201	26421430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ENSMUSG00000004018.10_26337202_26421878_1	chr11	+	1659	14	FSM	ENSMUSG00000004018.10	ENSMUST00000004120.9	2724	14	1067	-2	0	2	multi-exon	FALSE	canonical	3	204	junction_1	21.2544461064019	1234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAGTCATTAACACCCCT	NA	False	NA	15	True	AATAAA	-17	NA	26337201	26421878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ENSMUSG00000004018.10_26421404_26543622_1	chr11	+	1795	13	Fusion	ENSMUSG00000004018.10_ENSMUSG00000068314.6	novel	2724	14	NA	NA	3069	-240	multi-exon	FALSE	non_canonical	0	0	junction_1	0	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCTCGCAGCCAGGTGG	9306	False	NA	NA	False	NA	NA	NA	26421403	26543622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr11_+_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543385
ENSMUSG00000004038.10_107871012_107876484_1	chr3	-	1114	7	NIC	ENSMUSG00000004038.10	novel	1311	8	NA	NA	115	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_4	86.6033422501054	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTCTTTTTCTTTTGC	NA	False	NA	0	True	AATAAA	-20	NA	107876484	107871011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875451_107875517_107876078_107876155_107876420
ENSMUSG00000004038.10_107871012_107876484_2	chr3	-	1196	8	FSM	ENSMUSG00000004038.10	ENSMUST00000004136.10	1311	8	115	0	115	0	multi-exon	FALSE	canonical	3	154	junction_5	50.6947648547014	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTCTTTTTCTTTTGC	NA	False	NA	0	True	AATAAA	-20	NA	107876484	107871011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875081_107875164_107875451_107875517_107876078_107876155_107876420
ENSMUSG00000004038.10_107871278_107876484_1	chr3	-	930	8	FSM	ENSMUSG00000004038.10	ENSMUST00000004136.10	1311	8	115	266	115	-266	multi-exon	FALSE	canonical	3	154	junction_5	50.6947648547014	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTTTTCTGCAATCTG	NA	False	NA	NA	False	NA	NA	NA	107876484	107871277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875081_107875164_107875451_107875517_107876078_107876155_107876420
ENSMUSG00000004040.17_100777636_100830245_1	chr11	-	4395	24	FSM	ENSMUSG00000004040.17	ENSMUST00000127638.8	4516	24	121	0	-15	0	multi-exon	FALSE	canonical	3	387	junction_2	54.0525544164325	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	100830245	100777635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ENSMUSG00000004040.17_100779507_100830245_1	chr11	-	2524	24	FSM	ENSMUSG00000004040.17	ENSMUST00000127638.8	4516	24	121	1871	-15	0	multi-exon	FALSE	canonical	3	387	junction_2	54.0525544164325	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTGACTTGAGACACCTG	NA	False	NA	NA	False	NA	NA	NA	100830245	100779506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ENSMUSG00000004056.16_27291171_27337691_1	chr7	+	1790	14	FSM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	194	2560	0	96	multi-exon	FALSE	canonical	3	377	junction_6	55.340153093199	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTTCTTCAGTCCTTG	NA	False	NA	56	True	NA	NA	NA	27291170	27337691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ENSMUSG00000004056.16_27291171_27338878_1	chr7	+	2977	14	FSM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	194	1373	0	0	multi-exon	FALSE	canonical	3	377	junction_6	55.340153093199	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	27291170	27338878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ENSMUSG00000004069.18_4501978_4524810_1	chr16	+	1855	12	FSM	ENSMUSG00000004069.18	ENSMUST00000060067.12	2648	12	44	749	0	268	multi-exon	FALSE	canonical	3	184	junction_10	248.960018695956	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTGAAGTGATTAATT	NA	False	NA	22	True	ATTAAA	-39	NA	4501977	4524810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4523707_4523825_4524431
ENSMUSG00000004070.16_4544227_4584113_1	chr16	+	1000	4	NIC	ENSMUSG00000004070.16	novel	1730	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	190.073669928268	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCTAACAGCATTT	NA	False	NA	14	True	AATAAA	-15	NA	4544226	4584113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_4544336_4582469_4582962_4583626_4583754_4583841
ENSMUSG00000004070.16_4544227_4584113_2	chr16	+	1237	6	FSM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	0	493	0	0	multi-exon	FALSE	canonical	3	381	junction_2	14.4277510374971	2033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCTAACAGCATTT	NA	False	NA	14	True	AATAAA	-15	NA	4544226	4584113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
ENSMUSG00000004071.14_4544227_4584113_1	chr16	-	913	6	NNC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	3848	23985	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAGTCACCAGGCCACGC	NA	False	NA	NA	False	NA	NA	NA	4584113	4544226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_4544336_4580422_4580542_4581592_4581711_4582469_4582638_4583626_4583754_4583841
ENSMUSG00000004071.14_4544227_4584113_2	chr16	-	1110	5	NIC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	3848	23985	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAGTCACCAGGCCACGC	NA	False	NA	NA	False	NA	NA	NA	4584113	4544226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583841
ENSMUSG00000004071.14_4574858_4584113_1	chr16	-	1262	6	NIC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	3848	-6646	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCGGTCGCCGGCGTGT	NA	False	NA	NA	False	NA	NA	NA	4584113	4574857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_4574992_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
ENSMUSG00000004071.14_4584705_4607800_1	chr16	-	2519	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	54	1380	-1	0	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCTATTTTAGACCAT	NA	False	NA	-14	True	AATAAA	-14	NA	4607800	4584704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ENSMUSG00000004071.14_4585203_4607800_1	chr16	-	2021	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	54	1878	-1	0	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCCTCTGCTGTCTTG	NA	False	NA	-19	True	ATTAAA	-21	NA	4607800	4585202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ENSMUSG00000004071.14_4585203_4608130_1	chr16	-	2030	6	FSM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	26	498	0	0	multi-exon	FALSE	canonical	3	30	junction_5	186.698259231306	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCCTCTGCTGTCTTG	NA	False	NA	-19	True	ATTAAA	-21	NA	4608130	4585202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4608015
ENSMUSG00000004071.14_4585612_4607800_1	chr16	-	1612	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	54	2287	-1	-409	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGTCTGTGCTATGT	NA	False	NA	0	True	AATGAA	-18	NA	4607800	4585611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ENSMUSG00000004071.14_4585612_4608130_1	chr16	-	1621	6	FSM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	26	907	0	-409	multi-exon	FALSE	canonical	3	30	junction_5	186.698259231306	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGTCTGTGCTATGT	NA	False	NA	0	True	AATGAA	-18	NA	4608130	4585611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4608015
ENSMUSG00000004096.10_14411943_14421670_1	chr9	+	878	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	30	203	0	9	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	4579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGACTTTTTTTTTTGGTT	NA	False	NA	22	True	ATTAAA	-22	NA	14411942	14421670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ENSMUSG00000004099.17_20818505_20864141_1	chr9	-	5230	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_29	188.801695787962	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864141	20818504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841454_20843405_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ENSMUSG00000004100.13_20799561_20800864_1	chr9	+	455	3	ISM	ENSMUSG00000004100.13	ENSMUST00000135608.8	1157	4	15	773	0	-114	5prime_fragment	FALSE	canonical	3	785	junction_2	21	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTTCTCTCGCCCCAC	NA	False	NA	24	True	AGTAAA	-25	NA	20799560	20800864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_20799614_20799702_20799874_20800633
ENSMUSG00000004100.13_20799561_20803474_1	chr9	+	1660	10	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	766	junction_8	67.5113159239085	1769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799560	20803474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802662_20802746_20803044_20803127
ENSMUSG00000004113.19_24496391_24498146_1	chr2	-	1160	3	ISM	ENSMUSG00000004113.19	ENSMUST00000100348.10	7182	47	154913	4	-600	0	3prime_fragment	FALSE	canonical	2	6	junction_1	0.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACATGGTTCTCTCTAT	NA	False	NA	NA	False	AATAAA	-13	NA	24498146	24496390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_24497113_24497453_24497699_24497953
ENSMUSG00000004207.15_60113450_60138377_1	chr10	+	2646	14	NNC	ENSMUSG00000004207.15	novel	2657	15	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_8	249.821972115103	3180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGCCTTGTGTCTCTT	6990	False	NA	NA	False	AATAAA	-17	NA	60113449	60138377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135245_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUSG00000004207.15_60113450_60138377_2	chr10	+	2639	14	NNC	ENSMUSG00000004207.15	novel	2657	15	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	277.668824918032	1597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGCCTTGTGTCTCTT	6990	False	NA	NA	False	AATAAA	-17	NA	60113449	60138377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136562_60136661_60137472
ENSMUSG00000004207.15_60113450_60138377_3	chr10	+	2649	14	FSM	ENSMUSG00000004207.15	ENSMUST00000105465.8	2646	14	1	-4	0	1	multi-exon	FALSE	canonical	3	864	junction_6	81.2601199887849	3891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGCCTTGTGTCTCTT	6990	False	NA	NA	False	AATAAA	-17	NA	60113449	60138377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUSG00000004207.15_60113450_60138377_4	chr10	+	2640	14	NNC	ENSMUSG00000004207.15	novel	2654	14	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	282.946207278023	2653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGCCTTGTGTCTCTT	6990	False	NA	NA	False	AATAAA	-17	NA	60113449	60138377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134885_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUSG00000004207.15_60113450_60138377_5	chr10	+	2642	14	NNC	ENSMUSG00000004207.15	novel	2657	15	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	277.668824918032	2111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGCCTTGTGTCTCTT	6990	False	NA	NA	False	AATAAA	-17	NA	60113449	60138377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136391_60136552_60136661_60137472
ENSMUSG00000004221.17_73453089_73472487_1	chrX	+	2339	13	NIC	ENSMUSG00000004221.17	novel	727	4	NA	NA	-15051	-3987	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCTAAGCTTCGCTGGC	NA	False	NA	NA	False	NA	NA	NA	73453088	73472487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
ENSMUSG00000004233.15_99048409_99124574_1	chr3	+	1440	6	FSM	ENSMUSG00000004233.15	ENSMUST00000004343.7	4410	6	25	2945	0	657	multi-exon	FALSE	canonical	3	38	junction_2	3.66606055596467	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGTGATGATGATGTG	NA	False	NA	NA	False	CATAAA	-19	NA	99048408	99124574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_99048505_99094796_99095055_99111851_99111933_99112540_99112627_99121971_99122091_99123774
ENSMUSG00000004264.18_124689299_124693913_1	chr6	+	1312	9	NIC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	902.100985200659	4688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTGAGTGTGTAC	NA	False	NA	24	True	AATAAA	-25	NA	124689298	124693913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692994_124693568
ENSMUSG00000004266.16_124697683_124715547_1	chr6	-	2083	16	FSM	ENSMUSG00000004266.16	ENSMUST00000171549.9	2226	16	130	13	0	0	multi-exon	FALSE	canonical	3	18	junction_15	37.1732281203676	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATTGCCTCCAAGTCTG	9050	False	NA	-13	True	AATAAA	-15	NA	124715547	124697682	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124715461
ENSMUSG00000004267.17_124737328_124746517_1	chr6	-	2366	12	FSM	ENSMUSG00000004267.17	ENSMUST00000004378.15	2795	12	119	310	-4	0	multi-exon	FALSE	canonical	3	32	junction_11	8.77449346328266	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCCCTTGTCTGAGGAC	9985	False	NA	-6	True	ATTAAA	-17	NA	124746517	124737327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
ENSMUSG00000004268.12_124640135_124681133_1	chr6	-	1888	13	Genic_Genomic	ENSMUSG00000004268.12	novel	4329	1	NA	NA	1489	40913	multi-exon	FALSE	non_canonical	0	0	junction_1	0	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCCCGAATGTGGGCAGAA	NA	False	NA	NA	False	NA	NA	NA	124681133	124640134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ENSMUSG00000004268.12_124640135_124681381_1	chr6	-	2136	13	NIC	ENSMUSG00000004268.12	novel	1034	6	NA	NA	1241	40913	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCCCGAATGTGGGCAGAA	NA	False	NA	NA	False	NA	NA	NA	124681381	124640134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ENSMUSG00000004268.12_124681345_124689118_1	chr6	-	1308	5	NIC	ENSMUSG00000004268.12	novel	1034	6	NA	NA	-14	0	intron_retention	FALSE	canonical	3	1245	junction_4	117.50957407803	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCAGACCTGAT	NA	False	NA	-15	True	TATAAA	-18	NA	124689118	124681344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_124681622_124681901_124682052_124682120_124682620_124682703_124682806_124688838
ENSMUSG00000004270.14_124640135_124681133_1	chr6	+	1874	12	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	0	153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	249.972163739541	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTAGCATCCCAGACTGC	NA	False	NA	33	True	GATAAA	-27	NA	124640134	124681133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677611_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ENSMUSG00000004270.14_124681345_124689020_1	chr6	+	912	6	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	1377	7639	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTGCACCGAAGTCCT	NA	False	NA	NA	False	NA	NA	NA	124681344	124689020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_124681617_124681896_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
ENSMUSG00000004270.14_124681345_124689118_1	chr6	+	1004	6	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	1377	7737	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	2843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCCGTACGGAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	124681344	124689118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688844
ENSMUSG00000004270.14_124681345_124689118_10	chr6	+	908	5	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	1377	7737	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCCGTACGGAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	124681344	124689118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124688838
ENSMUSG00000004270.14_124681345_124689118_2	chr6	+	1005	6	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	1377	7737	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCCGTACGGAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	124681344	124689118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_124681622_124681901_124682052_124682120_124682175_124682477_124682620_124682703_124682806_124688838
ENSMUSG00000004270.14_124681345_124689118_3	chr6	+	1035	6	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	1377	7737	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	2499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCCGTACGGAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	124681344	124689118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688813
ENSMUSG00000004270.14_124681345_124689118_4	chr6	+	1016	6	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	1377	7737	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCCGTACGGAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	124681344	124689118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682697_124682806_124688838
ENSMUSG00000004270.14_124681345_124689118_6	chr6	+	1023	6	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	1377	7737	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCCGTACGGAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	124681344	124689118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688825
ENSMUSG00000004270.14_124681345_124689118_7	chr6	+	1005	6	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	1377	7737	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCCGTACGGAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	124681344	124689118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_124681617_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
ENSMUSG00000004270.14_124681345_124689118_8	chr6	+	1079	5	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	1377	7737	intron_retention	FALSE	non_canonical	0	0	junction_1	0	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCCGTACGGAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	124681344	124689118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_124681622_124681901_124682180_124682477_124682620_124682703_124682806_124688838
ENSMUSG00000004270.14_124681345_124689118_9	chr6	+	1015	6	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	1377	7737	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCCGTACGGAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	124681344	124689118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_124681622_124681896_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
ENSMUSG00000004317.15_7024088_7054921_1	chrX	-	4319	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	32	4039	-9	1620	multi-exon	FALSE	canonical	3	32	junction_11	7.74596669241483	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTCCTTTATTATCCA	NA	False	NA	NA	False	NA	NA	NA	7054921	7024087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
ENSMUSG00000004317.15_7024088_7185597_1	chrX	-	4733	14	NIC	ENSMUSG00000004317.15	novel	3052	15	NA	NA	0	1620	combination_of_known_junctions	FALSE	canonical	2	11	junction_12	15.0816319177261	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTCCTTTATTATCCA	3131	False	NA	NA	False	NA	NA	NA	7185597	7024087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7079102_7079250_7182897_7183063_7185344
ENSMUSG00000004317.15_7025708_7054921_1	chrX	-	2699	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	32	5659	-9	0	multi-exon	FALSE	canonical	3	32	junction_11	7.74596669241483	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTCTTTAAAATAGTT	NA	False	NA	NA	False	AGTAAA	-24	NA	7054921	7025707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
ENSMUSG00000004341.9_21496409_21503795_1	chr13	+	1227	5	FSM	ENSMUSG00000004341.9	ENSMUST00000004453.9	1340	5	114	-1	114	1	multi-exon	FALSE	canonical	3	9	junction_2	5.71729831301464	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACTCTGAGTGATGTT	1039	False	NA	NA	False	NA	NA	NA	21496408	21503795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_21496515_21497817_21497972_21501154_21501273_21501738_21501839_21503046
ENSMUSG00000004359.17_88510634_88520893_1	chr10	-	1780	6	FSM	ENSMUSG00000004359.17	ENSMUST00000138734.2	646	6	-16	-1118	-16	0	multi-exon	FALSE	canonical	3	380	junction_4	47.5815090134813	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	88520893	88510633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88520827
ENSMUSG00000004359.17_88511134_88520893_1	chr10	-	1280	6	FSM	ENSMUSG00000004359.17	ENSMUST00000138734.2	646	6	-16	-618	-16	0	multi-exon	FALSE	canonical	3	380	junction_4	47.5815090134813	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTTGTAGACTGTCT	NA	False	NA	-5	True	AATAAA	-22	NA	88520893	88511133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88520827
ENSMUSG00000004359.17_88511134_88520893_2	chr10	-	1566	6	NNC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	180.578625534696	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTTGTAGACTGTCT	NA	False	NA	-5	True	AATAAA	-22	NA	88520893	88511133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_88511933_88513361_88513757_88514385_88514499_88515720_88515818_88516340_88516437_88520827
ENSMUSG00000004359.17_88511134_88520893_3	chr10	-	2195	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-16	0	intron_retention	FALSE	canonical	3	380	junction_3	53.1859943970215	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTTGTAGACTGTCT	NA	False	NA	-5	True	AATAAA	-22	NA	88520893	88511133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_88511933_88513361_88514499_88515720_88515818_88516340_88516437_88520827
ENSMUSG00000004393.11_6208919_6217746_1	chr11	-	2646	13	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	937	junction_7	74.5961348417821	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTGTCTGGCTCTG	4515	False	NA	-2	True	NA	NA	NA	6217746	6208918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ENSMUSG00000004393.11_6208919_6217746_2	chr11	-	1876	14	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	280.168482699651	2557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTGTCTGGCTCTG	4515	False	NA	-2	True	NA	NA	NA	6217746	6208918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216918_6217417_6217580_6217659
ENSMUSG00000004394.13_6220369_6224865_1	chr11	-	1991	5	NIC	ENSMUSG00000004394.13	novel	2003	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_4	203.804287246368	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTCTCCCTTTGTTTT	5343	False	NA	NA	False	ATTAAA	-24	NA	6224865	6220368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224680
ENSMUSG00000004394.13_6220714_6224865_1	chr11	-	1653	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	5	345	0	-345	multi-exon	FALSE	canonical	3	418	junction_4	49.7663289785373	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATGTGAAATAATAGAT	5343	False	NA	-1	True	AATAAA	-16	NA	6224865	6220713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ENSMUSG00000004394.13_6220714_6224865_2	chr11	-	1646	5	NIC	ENSMUSG00000004394.13	novel	2003	5	NA	NA	0	-345	combination_of_known_splicesites	FALSE	canonical	3	36	junction_4	203.804287246368	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATGTGAAATAATAGAT	5343	False	NA	-1	True	AATAAA	-16	NA	6224865	6220713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224680
ENSMUSG00000004394.13_6221147_6224865_1	chr11	-	1220	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	5	778	0	514	multi-exon	FALSE	canonical	3	418	junction_4	49.7663289785373	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATCATCATCACTCCCT	5343	False	NA	NA	False	GATAAA	-21	NA	6224865	6221146	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ENSMUSG00000004446.13_120870080_120893797_1	chr6	-	2042	7	NIC	ENSMUSG00000004446.13	novel	2415	7	NA	NA	0	-265	combination_of_known_splicesites	FALSE	canonical	3	32	junction_5	439.124507780348	2301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	-26	True	AATAAA	-16	NA	120893797	120870079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120883389_120883525_120893694
ENSMUSG00000004446.13_120870080_120893797_2	chr6	-	1907	6	FSM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	17	265	0	-265	multi-exon	FALSE	canonical	3	795	junction_5	85.8011654932496	2310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	-26	True	AATAAA	-16	NA	120893797	120870079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
ENSMUSG00000004446.13_120870082_120884826_1	chr6	-	1927	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	8933	-267	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	387.26600677054	2023	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGGGAGAGCTGTAT	NA	False	NA	-28	True	AATAAA	-14	NA	120884826	120870081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120884701
ENSMUSG00000004451.15_119398035_119432355_1	chr1	-	2179	5	NNC	ENSMUSG00000004451.15	novel	2289	5	NA	NA	169	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	456.372312372256	1477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGCCCTTTTTCCTGCAT	NA	False	NA	-4	True	AATAAA	-21	NA	119432355	119398034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432247
ENSMUSG00000004451.15_119398035_119432355_2	chr1	-	2120	5	FSM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	169	0	169	0	multi-exon	FALSE	canonical	3	967	junction_4	66.8169140263152	1492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGCCCTTTTTCCTGCAT	NA	False	NA	-4	True	AATAAA	-21	NA	119432355	119398034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
ENSMUSG00000004451.15_119399058_119432355_1	chr1	-	1097	5	FSM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	169	1023	169	817	multi-exon	FALSE	canonical	3	967	junction_4	66.8169140263152	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTGCACCCCTGTA	NA	False	NA	NA	False	ATTAAA	-20	NA	119432355	119399057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
ENSMUSG00000004460.18_22676616_22690857_2	chr16	+	1625	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	21	281	0	-199	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTGACTCCTGTTTCT	NA	False	NA	25	True	AATACA	-18	NA	22676615	22690857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ENSMUSG00000004462.8_22631970_22676292_1	chr16	-	3260	8	NIC	ENSMUSG00000004462.8	novel	2645	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	32.3772406836301	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTTACTGTGCCAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	22676292	22631969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22675504
ENSMUSG00000004462.8_22631970_22676292_2	chr16	-	2670	8	FSM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	127	6	0	0	multi-exon	FALSE	canonical	3	51	junction_7	24.7526539496479	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTTACTGTGCCAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	22676292	22631969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
ENSMUSG00000004462.8_22636598_22676292_1	chr16	-	2316	7	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	125	4628	0	-435	5prime_fragment	FALSE	canonical	3	49	junction_6	23.3410701458942	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCACATAGAGCATTATTA	NA	False	NA	NA	False	AATAAA	-16	NA	22676292	22636597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
ENSMUSG00000004462.8_22636598_22676292_2	chr16	-	2466	7	ISM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	127	4634	0	-435	5prime_fragment	FALSE	canonical	3	51	junction_6	22.6697301851316	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCACATAGAGCATTATTA	NA	False	NA	NA	False	AATAAA	-16	NA	22676292	22636597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
ENSMUSG00000004462.8_22644245_22676292_1	chr16	-	1221	4	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	125	12275	0	0	5prime_fragment	FALSE	canonical	3	49	junction_3	31.4783876475414	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATGCCTTTGTTAGGA	NA	False	NA	NA	False	NA	NA	NA	22676292	22644244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_22644883_22652627_22652784_22660478_22660858_22676244
ENSMUSG00000004530.13_113981926_114046767_1	chr5	-	2010	11	FSM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	52	1429	-1	1378	multi-exon	FALSE	canonical	3	905	junction_1	46.3810306051946	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAAAAGGGACAGCACT	NA	False	NA	NA	False	NA	NA	NA	114046767	113981925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ENSMUSG00000004530.13_113982253_114046767_1	chr5	-	1683	11	FSM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	52	1756	-1	1051	multi-exon	FALSE	canonical	3	905	junction_1	46.3810306051946	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAAACCTGGAAGCTGAGC	NA	False	NA	NA	False	NA	NA	NA	114046767	113982252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ENSMUSG00000004561.15_52122392_52129325_1	chr14	+	1526	14	NNC	ENSMUSG00000004561.15	novel	1623	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	63.9408935644669	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGATGTTCTGATTGC	NA	False	NA	NA	False	AATAAA	-16	NA	52122391	52129325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127394_52128143_52128186_52128565_52128659_52128823_52129009_52129083
ENSMUSG00000004561.15_52122392_52129325_2	chr14	+	1523	14	NNC	ENSMUSG00000004561.15	novel	1623	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	63.9408935644669	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGATGTTCTGATTGC	NA	False	NA	NA	False	AATAAA	-16	NA	52122391	52129325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128141_52128186_52128565_52128659_52128823_52129009_52129083
ENSMUSG00000004561.15_52122392_52129325_3	chr14	+	1605	13	FSM	ENSMUSG00000004561.15	ENSMUST00000164902.8	1461	13	-11	-133	0	0	multi-exon	FALSE	canonical	0	0	junction_8	49.8556248916141	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGATGTTCTGATTGC	NA	False	NA	NA	False	AATAAA	-16	NA	52122391	52129325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823
ENSMUSG00000004561.15_52122392_52129325_4	chr14	+	1524	14	NNC	ENSMUSG00000004561.15	novel	1623	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	48.1261901412816	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGATGTTCTGATTGC	NA	False	NA	NA	False	AATAAA	-16	NA	52122391	52129325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126990_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ENSMUSG00000004565.16_3566874_3594267_1	chr8	+	4387	32	ISM	ENSMUSG00000004565.16	ENSMUST00000208002.2	4444	35	1449	0	0	0	3prime_fragment	FALSE	canonical	1	71	junction_27	44.5244031581209	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3566873	3594267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ENSMUSG00000004565.16_3566874_3594267_2	chr8	+	4399	32	ISM	ENSMUSG00000004565.16	ENSMUST00000004681.14	4438	34	1490	0	0	0	3prime_fragment	FALSE	canonical	1	71	junction_27	50.3064283424121	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3566873	3594267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ENSMUSG00000004565.16_3591296_3594261_1	chr8	+	929	5	ISM	ENSMUSG00000004565.16	ENSMUST00000207941.2	4263	31	24422	-1	221	1	3prime_fragment	FALSE	canonical	3	270	junction_2	13.1624465810882	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGCCTGGTGCTGTCT	3502	False	NA	11	True	AATAAA	-15	NA	3591295	3594261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ENSMUSG00000004626.15_3681153_3692795_1	chr8	+	1935	19	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	83.3438697042797	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4585	False	NA	16	True	AATAAA	-22	NA	3681152	3692795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_3681279_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ENSMUSG00000004626.15_3681153_3693644_1	chr8	+	2713	19	FSM	ENSMUSG00000004626.15	ENSMUST00000004745.9	1847	19	-17	-849	0	0	multi-exon	FALSE	canonical	3	69	junction_17	74.555886735479	2036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCGGCTTCCTAGTAAC	4585	False	NA	NA	False	NA	NA	NA	3681152	3693644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691894_3692056_3692645
ENSMUSG00000004626.15_3690509_3693305_1	chr8	+	218	2	NNC	ENSMUSG00000004626.15	novel	629	3	NA	NA	-198	-339	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	32353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAGAAATAGAAACGGAAA	NA	False	NA	NA	False	NA	NA	NA	3690508	3693305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_3690708_3693286
ENSMUSG00000004637.16_115166435_115438991_1	chr8	+	1133	8	ISM	ENSMUSG00000004637.16	ENSMUST00000160862.8	1715	9	0	6428	0	5927	5prime_fragment	FALSE	canonical	3	58	junction_7	25.2303671905787	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGCGGCTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	115166434	115438991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115406526_115406616_115432940_115433127_115438726
ENSMUSG00000004642.14_33797399_33809664_1	chr5	-	1643	8	NNC	ENSMUSG00000004642.14	novel	1906	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	410.682855940281	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCCTATACTGTTTGG	NA	False	NA	-4	True	AATAAA	-22	NA	33809664	33797398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803405_33807086_33807192_33809306_33809424_33809538
ENSMUSG00000004642.14_33797399_33809664_2	chr5	-	1547	7	NIC	ENSMUSG00000004642.14	novel	1906	8	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_5	419.837270062263	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCCTATACTGTTTGG	NA	False	NA	-4	True	AATAAA	-22	NA	33809664	33797398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33809306_33809424_33809538
ENSMUSG00000004642.14_33797399_33809664_3	chr5	-	1644	8	NNC	ENSMUSG00000004642.14	novel	1906	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	408.542156793581	1494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCCTATACTGTTTGG	NA	False	NA	-4	True	AATAAA	-22	NA	33809664	33797398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_33798273_33799244_33799327_33801080_33801231_33802851_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
ENSMUSG00000004642.14_33797399_33809664_4	chr5	-	1652	8	FSM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	254	0	-14	0	multi-exon	FALSE	canonical	3	1110	junction_4	44.1837535937436	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCCTATACTGTTTGG	NA	False	NA	-4	True	AATAAA	-22	NA	33809664	33797398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
ENSMUSG00000004661.16_57697636_57744062_1	chr9	-	4039	9	NIC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	208	junction_3	16.1303285769385	440	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTATGGGATCCTTTCA	NA	False	NA	-3	True	AATAAA	-20	NA	57744062	57697635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
ENSMUSG00000004661.16_57697636_57744062_2	chr9	-	3017	6	NNC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_4	95.0347304936464	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTATGGGATCCTTTCA	NA	False	NA	-3	True	AATAAA	-20	NA	57744062	57697635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57703916_57741435_57741516_57743964
ENSMUSG00000004661.16_57699255_57744062_1	chr9	-	2420	9	NIC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	-9	189	combination_of_known_junctions	FALSE	canonical	3	208	junction_3	16.1303285769385	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTCATTCCTCAGGGCC	NA	False	NA	NA	False	NA	NA	NA	57744062	57699254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
ENSMUSG00000004665.11_79824457_79831224_1	chr10	+	1749	7	FSM	ENSMUSG00000004665.11	ENSMUST00000004784.11	2460	7	39	672	0	-672	multi-exon	FALSE	canonical	3	82	junction_2	7.8616509433805	352	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTACATTCCTGAGTT	1808	False	NA	7	True	NA	NA	NA	79824456	79831224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79824575_79827193_79827316_79828106_79828174_79828276_79828415_79829047_79829165_79829261_79829409_79830184
ENSMUSG00000004667.19_79871783_79875492_1	chr10	-	999	7	NNC	ENSMUSG00000004667.19	novel	1148	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1062.20206280266	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5652	False	NA	-19	True	ATTAAA	-19	NA	79875492	79871782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872796_79873021_79873219_79874272_79874448_79875416
ENSMUSG00000004667.19_79871783_79875546_1	chr10	-	1054	7	NNC	ENSMUSG00000004667.19	novel	1148	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	57	junction_1	1048.82823506362	12004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5598	False	NA	-19	True	ATTAAA	-19	NA	79875546	79871782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_79872125_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
ENSMUSG00000004667.19_79871783_79875546_2	chr10	-	1059	7	NNC	ENSMUSG00000004667.19	novel	1148	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1062.20206280266	6981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5598	False	NA	-19	True	ATTAAA	-19	NA	79875546	79871782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872796_79873015_79873219_79874272_79874448_79875416
ENSMUSG00000004667.19_79871783_79875546_3	chr10	-	829	4	NNC	ENSMUSG00000004667.19	novel	1148	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1410.27901100771	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5598	False	NA	-19	True	ATTAAA	-19	NA	79875546	79871782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_79872116_79873027_79873219_79874272_79874448_79875416
ENSMUSG00000004667.19_79871783_79875546_4	chr10	-	1071	7	NNC	ENSMUSG00000004667.19	novel	1148	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1062.20206280266	13271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5598	False	NA	-19	True	ATTAAA	-19	NA	79875546	79871782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873015_79873219_79874272_79874448_79875416
ENSMUSG00000004667.19_79871783_79875546_5	chr10	-	1137	6	FSM	ENSMUSG00000004667.19	ENSMUST00000152843.2	900	6	-11	-226	-2	0	multi-exon	FALSE	canonical	3	2552	junction_2	164.012926319848	5721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5598	False	NA	-19	True	ATTAAA	-19	NA	79875546	79871782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_79872136_79872360_79872433_79872597_79872808_79873021_79873219_79874272_79874448_79875416
ENSMUSG00000004667.19_79871783_79875546_6	chr10	-	1290	6	NIC	ENSMUSG00000004667.19	novel	1148	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	2552	junction_1	168.145175369381	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5598	False	NA	-19	True	ATTAAA	-19	NA	79875546	79871782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
ENSMUSG00000004667.19_79871783_79875546_7	chr10	-	1054	7	NNC	ENSMUSG00000004667.19	novel	1148	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1056.37998214027	6003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5598	False	NA	-19	True	ATTAAA	-19	NA	79875546	79871782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873208_79874272_79874448_79875416
ENSMUSG00000004748.6_4041962_4045445_1	chr11	-	929	4	FSM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	0	482	0	-482	multi-exon	FALSE	canonical	3	154	junction_3	5.18544972870135	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTTTTACTTGCATGT	NA	False	NA	-1	True	TTTAAA	-20	NA	4045445	4041961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_4042300_4043800_4044034_4044388_4044517_4045215
ENSMUSG00000004768.15_33758991_33779792_1	chr1	+	2454	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	15	1853	0	0	multi-exon	FALSE	canonical	2	71	junction_6	20.1190335305671	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGCTTTTCCTTTCTTT	NA	False	NA	8	True	TATAAA	-18	NA	33758990	33779792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ENSMUSG00000004771.13_64623514_64645012_1	chr9	-	1375	5	FSM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	28	933	0	271	multi-exon	FALSE	canonical	3	899	junction_3	39.0160223497988	2046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGCATAGGGTGTGGT	NA	False	NA	NA	False	AATAAA	-16	NA	64645012	64623513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515_64635712_64644865
ENSMUSG00000004771.13_64623887_64645012_1	chr9	-	329	2	NNC	ENSMUSG00000004771.13	novel	603	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTGTTTACTCTTCAT	NA	False	NA	-4	True	AATAAA	-20	NA	64645012	64623886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_64624069_64644865
ENSMUSG00000004771.13_64624052_64645012_2	chr9	-	831	5	NNC	ENSMUSG00000004771.13	novel	2336	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	419.237030210834	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGTGTTTTATTACT	NA	False	NA	-4	True	AATATA	-19	NA	64645012	64624051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_64624271_64632783_64632865_64633905_64634100_64635521_64635712_64644865
ENSMUSG00000004788.12_85266289_85273267_1	chr12	+	1436	8	FSM	ENSMUSG00000004788.12	ENSMUST00000004910.12	1605	8	34	135	0	0	multi-exon	FALSE	canonical	3	336	junction_7	13.1661284657074	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTTCGTTTATTGTTC	NA	False	NA	31	True	AATAAA	-16	NA	85266288	85273267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
ENSMUSG00000004788.12_85266289_85273267_2	chr12	+	1427	8	NIC	ENSMUSG00000004788.12	novel	1605	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	119.526446565484	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTTCGTTTATTGTTC	NA	False	NA	31	True	AATAAA	-16	NA	85266288	85273267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_85266499_85266595_85266708_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
ENSMUSG00000004788.12_85266289_85273267_3	chr12	+	1298	7	FSM	ENSMUSG00000004788.12	ENSMUST00000136495.3	957	7	2	-343	0	0	multi-exon	FALSE	canonical	0	0	junction_5	128.430266422418	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTTCGTTTATTGTTC	NA	False	NA	31	True	AATAAA	-16	NA	85266288	85273267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85271328_85271396_85272776
ENSMUSG00000004789.11_85157632_85180864_1	chr12	+	2738	14	NNC	ENSMUSG00000004789.11	novel	2764	15	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	93.6372201321827	1771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGGATCTGTGCTCCT	NA	False	NA	22	True	ATTAAA	-22	NA	85157631	85180864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_85157765_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ENSMUSG00000004789.11_85157632_85180864_2	chr12	+	2540	14	NNC	ENSMUSG00000004789.11	novel	2764	15	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_7	94.7165812792606	1443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGGATCTGTGCTCCT	NA	False	NA	22	True	ATTAAA	-22	NA	85157631	85180864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85169601_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ENSMUSG00000004789.11_85157632_85180864_3	chr12	+	2853	14	NIC	ENSMUSG00000004789.11	novel	2764	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	294	junction_6	23.4056079862733	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGGATCTGTGCTCCT	NA	False	NA	22	True	ATTAAA	-22	NA	85157631	85180864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ENSMUSG00000004843.8_65336014_65359406_1	chr16	-	1666	6	FSM	ENSMUSG00000004843.8	ENSMUST00000004965.8	1872	6	206	0	0	0	multi-exon	FALSE	canonical	3	234	junction_5	16.0573970493352	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCCTAACGCGCATCA	NA	False	NA	-8	True	AATAAA	-19	NA	65359406	65336013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65347848_65347941_65359360
ENSMUSG00000004843.8_65336640_65359612_1	chr16	-	1246	6	FSM	ENSMUSG00000004843.8	ENSMUST00000004965.8	1872	6	0	626	0	-626	multi-exon	FALSE	canonical	3	234	junction_5	16.0573970493352	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTGCTTGTCCTTTG	NA	False	NA	-3	True	ATTAAA	-19	NA	65359612	65336639	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65347848_65347941_65359360
ENSMUSG00000004846.11_137011044_137016397_1	chr5	+	704	5	NIC	ENSMUSG00000004846.11	novel	2362	14	NA	NA	-4829	-4545	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGCGGAGTCCCGAGCA	NA	False	NA	NA	False	NA	NA	NA	137011043	137016397	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137016342
ENSMUSG00000004846.11_137011044_137016397_2	chr5	+	804	4	NIC	ENSMUSG00000004846.11	novel	2362	14	NA	NA	-4829	-4545	intron_retention	FALSE	non_canonical	0	0	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGCGGAGTCCCGAGCA	NA	False	NA	NA	False	NA	NA	NA	137011043	137016397	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_137011542_137011721_137011802_137013732_137013904_137016342
ENSMUSG00000004846.11_137011044_137016397_3	chr5	+	713	5	NNC	ENSMUSG00000004846.11	novel	2362	14	NA	NA	-4829	-4545	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGCGGAGTCCCGAGCA	NA	False	NA	NA	False	NA	NA	NA	137011043	137016397	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137016333
ENSMUSG00000004846.11_137016125_137025393_1	chr5	+	2689	20	NNC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	-107	-109	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	42.0605683834917	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGAGTCCGTGAGTCCA	NA	False	NA	13	True	AATAAA	-14	NA	137016124	137025393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_137016229_137016458_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ENSMUSG00000004846.11_137016125_137025393_2	chr5	+	2919	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	252	109	-107	-109	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGAGTCCGTGAGTCCA	NA	False	NA	13	True	AATAAA	-14	NA	137016124	137025393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ENSMUSG00000004846.11_137016232_137025393_1	chr5	+	2812	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	359	109	0	-109	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGAGTCCGTGAGTCCA	NA	False	NA	13	True	AATAAA	-14	NA	137016231	137025393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ENSMUSG00000004846.11_137016447_137025393_1	chr5	+	2597	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	574	109	117	-109	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGAGTCCGTGAGTCCA	NA	False	NA	13	True	AATAAA	-14	NA	137016446	137025393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ENSMUSG00000004865.17_28806622_28841428_1	chr17	-	4333	17	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	184.660996406253	1606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTCCACAAGTTTGGT	NA	False	NA	-11	True	AATAAA	-20	NA	28841428	28806621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_28808346_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ENSMUSG00000004865.17_28806622_28841428_2	chr17	-	4398	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	255	0	-3	0	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	1632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTCCACAAGTTTGGT	NA	False	NA	-11	True	AATAAA	-20	NA	28841428	28806621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ENSMUSG00000004865.17_28808564_28841428_1	chr17	-	2450	16	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	190.675454342946	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	-2	True	ATTAAA	-39	NA	28841428	28808563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813246_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ENSMUSG00000004865.17_28808564_28841428_2	chr17	-	2829	15	FSM	ENSMUSG00000004865.17	ENSMUST00000233440.2	4804	15	33	1942	-3	0	multi-exon	FALSE	canonical	3	554	junction_1	84.536943982848	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	-2	True	ATTAAA	-39	NA	28841428	28808563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ENSMUSG00000004865.17_28808564_28841428_3	chr17	-	2456	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	255	1942	-3	0	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	-2	True	ATTAAA	-39	NA	28841428	28808563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ENSMUSG00000004865.17_28819209_28841428_1	chr17	-	1015	9	NIC	ENSMUSG00000004865.17	novel	4804	15	NA	NA	-3	101	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	253.536486526101	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATTGCAGCAGTGACTT	NA	False	NA	-16	True	AATAAA	-28	NA	28841428	28819208	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_28819431_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ENSMUSG00000004880.12_181644387_181669926_1	chr1	-	2005	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	18	1487	0	-1466	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACAAGGGAAAGTCCAAA	NA	False	NA	NA	False	NA	NA	NA	181669926	181644386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ENSMUSG00000004896.17_87826843_87830741_1	chr3	-	1073	6	NNC	ENSMUSG00000004896.17	novel	3157	7	NA	NA	1841	3065	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGAAATTTAGCCAACCG	1574	False	NA	NA	False	NA	NA	NA	87830741	87826842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_87827136_87829123_87829356_87829437_87829534_87829694_87829791_87830241_87830373_87830516
ENSMUSG00000004896.17_87826843_87830741_2	chr3	-	896	6	NNC	ENSMUSG00000004896.17	novel	3157	7	NA	NA	1841	3065	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	433	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGAAATTTAGCCAACCG	1574	False	NA	NA	False	NA	NA	NA	87830741	87826842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_87826959_87829123_87829356_87829437_87829534_87829694_87829791_87830241_87830373_87830516
ENSMUSG00000004896.17_87826843_87830741_3	chr3	-	950	6	NNC	ENSMUSG00000004896.17	novel	3157	7	NA	NA	1841	3065	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	716	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGAAATTTAGCCAACCG	1574	False	NA	NA	False	NA	NA	NA	87830741	87826842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_87827013_87829123_87829356_87829437_87829534_87829694_87829791_87830241_87830373_87830516
ENSMUSG00000004896.17_87826843_87830741_4	chr3	-	958	6	NIC	ENSMUSG00000004896.17	novel	3157	7	NA	NA	1841	3065	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1532	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGAAATTTAGCCAACCG	1574	False	NA	NA	False	NA	NA	NA	87830741	87826842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUSG00000004896.17_87826843_87830741_5	chr3	-	904	6	NIC	ENSMUSG00000004896.17	novel	3157	7	NA	NA	1841	3065	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGAAATTTAGCCAACCG	1574	False	NA	NA	False	NA	NA	NA	87830741	87826842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_87826959_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUSG00000004896.17_87826843_87830974_1	chr3	-	1137	6	NIC	ENSMUSG00000004896.17	novel	3157	7	NA	NA	1608	3065	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGAAATTTAGCCAACCG	1341	False	NA	NA	False	NA	NA	NA	87830974	87826842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_87826959_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUSG00000004896.17_87827007_87830741_1	chr3	-	909	6	NNC	ENSMUSG00000004896.17	novel	3157	7	NA	NA	1841	2901	intron_retention	FALSE	non_canonical	0	0	junction_1	0	476	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTTTCTTTCCACGTGC	1574	False	NA	NA	False	NA	NA	NA	87830741	87827006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_87827136_87829123_87829356_87829437_87829534_87829694_87829791_87830241_87830373_87830516
ENSMUSG00000004897.17_87813883_87823039_1	chr3	+	1590	6	FSM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	255	400	255	-400	multi-exon	FALSE	canonical	3	2720	junction_5	175.133549041867	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAGAAGAAAAAAAGGA	NA	False	NA	77	True	AATAAA	-37	NA	87813882	87823039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
ENSMUSG00000004897.17_87813937_87823439_1	chr3	+	1936	6	FSM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	309	0	-220	0	multi-exon	FALSE	canonical	3	2720	junction_5	175.133549041867	1784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTAATTCTTTTCAA	NA	False	NA	25	True	AATAAA	-21	NA	87813936	87823439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
ENSMUSG00000004929.13_80905961_80918054_1	chr10	+	2401	13	FSM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	92	339	0	-339	multi-exon	TRUE	canonical	3	459	junction_3	51.2387521532504	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCTGGTCCTCTCTCT	5542	False	NA	10	True	ATTAAA	-16	NA	80905960	80918054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ENSMUSG00000004929.13_80905961_80918054_2	chr10	+	2396	13	NNC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	0	-339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	155.840441014377	751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCTGGTCCTCTCTCT	5542	False	NA	10	True	ATTAAA	-16	NA	80905960	80918054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916251_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ENSMUSG00000004934.15_80989759_81003570_1	chr10	-	1725	11	FSM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	187	659	-22	310	multi-exon	FALSE	canonical	3	608	junction_2	40.6104666311531	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCAGCCTGCACGCCACCT	NA	False	NA	-16	True	AATAAA	-14	NA	81003570	80989758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ENSMUSG00000004937.7_80879911_80896015_2	chr10	-	2177	12	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_11	260.894741448927	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTCTCTGCTTCCTGT	4769	False	NA	-13	True	AATAAA	-15	NA	80896015	80879910	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895751
ENSMUSG00000004937.7_80879911_80896015_3	chr10	-	1957	12	NNC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	293.057013605101	2007	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTCTCTGCTTCCTGT	4769	False	NA	-13	True	AATAAA	-15	NA	80896015	80879910	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_80880838_80882023_80882137_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ENSMUSG00000004945.16_5483472_5490535_1	chr17	-	612	3	FSM	ENSMUSG00000004945.16	ENSMUST00000185896.2	780	3	-4	172	-1	-172	multi-exon	FALSE	canonical	3	677	junction_2	16.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGTATATTGCTTGA	3451	False	NA	NA	False	AATAAA	-16	NA	5490535	5483471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_5483855_5489806_5489908_5490407
ENSMUSG00000004951.11_135917196_135918415_1	chr5	+	478	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	423	2	324	0	multi-exon	FALSE	canonical	3	2181	junction_2	11	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCTGACTCCAGAGTTAT	NA	False	NA	5	True	AATAAA	-23	NA	135917195	135918415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135917289_135917902_135917967_135918094
ENSMUSG00000004980.17_51438101_51439085_1	chr6	-	436	2	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	1079	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51439085	51438100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_51438414_51438962
ENSMUSG00000004980.17_51438101_51446827_1	chr6	-	3508	10	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	5712	junction_9	757.172925761462	1812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446827	51438100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_51438101_51446827_2	chr6	-	1529	11	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	2629.2348012302	1134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446827	51438100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_51438414_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444166_51444276_51446650
ENSMUSG00000004980.17_51438101_51446827_3	chr6	-	3388	9	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	933	junction_2	2125.40431080183	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446827	51438100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_51438101_51446827_4	chr6	-	2959	11	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	2180.54453061615	1417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446827	51438100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_51438414_51438962_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_51438101_51446827_5	chr6	-	3022	11	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	615	junction_1	2007.26311180174	1532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446827	51438100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_51438414_51438899_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_51438235_51446876_1	chr6	-	1582	12	FSM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	-51	131	-2	-110	multi-exon	FALSE	canonical	3	287	junction_2	2567.02803044511	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAAAAATGCTGATTGTA	NA	False	NA	NA	False	AATAAA	-2	NA	51446876	51438234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_51439740_51446827_1	chr6	-	1559	10	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	83	junction_1	2200.67333130365	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446827	51439739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_51440197_51441101_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_51439740_51446827_10	chr6	-	1584	10	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2297.7322636799	1887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446827	51439739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51442167_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_51439740_51446827_11	chr6	-	1451	9	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2333.96231961337	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446827	51439739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_51440179_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_51439740_51446827_2	chr6	-	1633	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2192.8288692919	2001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446827	51439739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441448_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_51439740_51446827_3	chr6	-	1530	9	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	10	junction_3	2430.8368415013	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446827	51439739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_51440235_51440390_51440474_51441068_51441192_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_51439740_51446827_4	chr6	-	1700	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	2183.95960585355	6067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446827	51439739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_51440235_51440390_51440474_51441068_51441179_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_51439740_51446827_5	chr6	-	1701	11	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_6	2195.63763175985	4359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446827	51439739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443294_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_51439740_51446827_6	chr6	-	1686	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2133.97121817517	2126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446827	51439739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_51440235_51440390_51440474_51441095_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_51439740_51446827_7	chr6	-	1738	12	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	2764.40192745717	7717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446827	51439739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444267_51444370_51444407_51446652
ENSMUSG00000004980.17_51439740_51446827_8	chr6	-	1704	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	2188.27081505009	6731	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446827	51439739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444267_51446650
ENSMUSG00000004980.17_51439740_51446827_9	chr6	-	1629	11	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	874	junction_10	2893.40520667258	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446827	51439739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ENSMUSG00000004980.17_51439740_51446876_1	chr6	-	1798	9	ISM	ENSMUSG00000004980.17	ENSMUST00000204158.3	1542	11	-51	1636	-2	0	5prime_fragment	FALSE	canonical	3	933	junction_2	2125.40431080183	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446876	51439739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_51439740_51446876_2	chr6	-	1651	10	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2309.76819423749	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446876	51439739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51443169_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004996.10_84978117_84983581_1	chr8	-	865	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	372	1582	295	-466	multi-exon	FALSE	canonical	3	192	junction_2	18.1159460144923	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAAAGTTCATCTTCAC	7338	False	NA	-8	True	AATAAA	-14	NA	84983581	84978116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
ENSMUSG00000005078.17_72132631_72148235_1	chr12	+	1851	8	NNC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.071061071468	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTCTGATAATTCT	NA	False	NA	14	True	AATAAA	-20	NA	72132630	72148235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_72132681_72132721_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUSG00000005078.17_72132631_72148235_2	chr12	+	1847	8	NNC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.071061071468	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTCTGATAATTCT	NA	False	NA	14	True	AATAAA	-20	NA	72132630	72148235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_72132680_72132724_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUSG00000005078.17_72132631_72148235_3	chr12	+	1850	8	NNC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.071061071468	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTCTGATAATTCT	NA	False	NA	14	True	AATAAA	-20	NA	72132630	72148235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_72132650_72132691_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUSG00000005078.17_72132631_72148235_4	chr12	+	1892	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	0	-600	0	0	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTCTGATAATTCT	NA	False	NA	14	True	AATAAA	-20	NA	72132630	72148235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUSG00000005078.17_72132882_72148235_1	chr12	+	1641	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	251	-600	251	0	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTCTGATAATTCT	NA	False	NA	14	True	AATAAA	-20	NA	72132881	72148235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUSG00000005078.17_72132882_72148235_2	chr12	+	1636	7	NNC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	251	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	238.800241950371	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTCTGATAATTCT	NA	False	NA	14	True	AATAAA	-20	NA	72132881	72148235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_72132958_72136088_72136176_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUSG00000005078.17_72132882_72148235_3	chr12	+	1623	7	FSM	ENSMUSG00000005078.17	ENSMUST00000117449.8	1874	7	251	0	251	0	multi-exon	FALSE	canonical	3	133	junction_1	199.890525593942	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTCTGATAATTCT	NA	False	NA	14	True	AATAAA	-20	NA	72132881	72148235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUSG00000005103.13_38684156_38718948_1	chr5	-	2888	15	FSM	ENSMUSG00000005103.13	ENSMUST00000005234.13	3089	15	201	0	30	0	multi-exon	FALSE	canonical	0	0	junction_6	233.56139122164	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATCACTGGCTCTAT	NA	False	NA	-7	True	ATTAAA	-16	NA	38718948	38684155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692684_38694481_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ENSMUSG00000005142.11_85809944_85824215_1	chr8	+	3126	24	FSM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	0	696	0	-696	multi-exon	FALSE	canonical	3	158	junction_7	31.1019422681999	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTCACCCAGTGCACT	NA	False	NA	14	True	ATTAAA	-16	NA	85809943	85824215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ENSMUSG00000005148.9_99536127_99552472_1	chr14	+	2830	4	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	1681.58701496202	1371	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTGCCTTCTTGACCC	NA	False	NA	22	True	AATAAA	-18	NA	99536126	99552472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_99536137_99538816_99539691_99540853_99540914_99550586
ENSMUSG00000005150.17_85807602_85808961_1	chr8	-	676	4	NNC	ENSMUSG00000005150.17	novel	2707	5	NA	NA	-1026	-1278	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAACTTCCGGGCGTGGG	NA	False	NA	NA	False	NA	NA	NA	85808961	85807601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_85807693_85807801_85807908_85808411_85808504_85808574
ENSMUSG00000005150.17_85807602_85808961_2	chr8	-	645	4	NIC	ENSMUSG00000005150.17	novel	2707	5	NA	NA	-1026	-1278	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAACTTCCGGGCGTGGG	NA	False	NA	NA	False	NA	NA	NA	85808961	85807601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_85807693_85807801_85807908_85808405_85808504_85808611
ENSMUSG00000005161.16_85696323_85700946_1	chr8	+	895	6	NNC	ENSMUSG00000005161.16	novel	1500	6	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1580.92256609867	8036	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTTGGTGTGTGTTT	NA	False	NA	19	True	AATAAA	-19	NA	85696322	85700946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85696392_85696868_85696974_85697069_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUSG00000005161.16_85696323_85700946_2	chr8	+	900	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	83	517	0	6	multi-exon	FALSE	canonical	3	3496	junction_3	236.69169820676	15201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTTGGTGTGTGTTT	NA	False	NA	19	True	AATAAA	-19	NA	85696322	85700946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUSG00000005161.16_85696323_85700946_3	chr8	+	988	6	FSM	ENSMUSG00000005161.16	ENSMUST00000109734.8	1612	6	107	517	0	6	multi-exon	FALSE	canonical	3	308	junction_1	1434.62463383284	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTTGGTGTGTGTTT	NA	False	NA	19	True	AATAAA	-19	NA	85696322	85700946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85696392_85696780_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUSG00000005204.13_69564167_69572735_1	chr11	-	2150	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	-63	226	-63	0	multi-exon	FALSE	canonical	3	762	junction_10	82.7371742326265	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAAAAGCAAGCCTCTTT	8467	False	NA	NA	False	NA	NA	NA	69572735	69564166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ENSMUSG00000005204.13_69564399_69572735_1	chr11	-	1918	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	-63	458	-63	-232	multi-exon	FALSE	canonical	3	762	junction_10	82.7371742326265	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCGTCAGATCTACAAGGAA	8467	False	NA	NA	False	NA	NA	NA	69572735	69564398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ENSMUSG00000005233.17_69024239_69036524_1	chr2	-	1349	7	NNC	ENSMUSG00000005233.17	novel	1352	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	321.127700455753	3141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	False	NA	-10	True	NA	NA	NA	69036524	69024238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035188_69035266_69035369_69035523_69036407
ENSMUSG00000005233.17_69024650_69036524_1	chr2	-	927	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	14	411	0	-410	multi-exon	FALSE	canonical	3	811	junction_6	34.6121365997536	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTCTTTGAGGTAACAT	NA	False	NA	NA	False	NA	NA	NA	69036524	69024649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
ENSMUSG00000005237.15_69343194_69344510_1	chr11	-	902	2	NNC	ENSMUSG00000005237.15	novel	13569	85	NA	NA	12010	12242	intron_retention	FALSE	non_canonical	0	0	junction_1	0	127	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGGCTTTTGGCTTTCT	6207	False	NA	NA	False	NA	NA	NA	69344510	69343193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_69343301_69343715
ENSMUSG00000005262.14_18631071_18653154_1	chr16	+	1105	12	NNC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	135.750317717236	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTGTTTAAAGTTACC	NA	False	NA	53	True	NA	NA	NA	18631070	18653154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645011_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUSG00000005262.14_18631071_18653154_2	chr16	+	1112	12	FSM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	27	857	0	0	multi-exon	FALSE	canonical	3	393	junction_10	35.0072011482124	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTGTTTAAAGTTACC	NA	False	NA	53	True	NA	NA	NA	18631070	18653154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUSG00000005262.14_18631071_18653154_3	chr16	+	1086	12	NIC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	122.971810248132	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTGTTTAAAGTTACC	NA	False	NA	53	True	NA	NA	NA	18631070	18653154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_18631168_18633579_18633687_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUSG00000005262.14_18631071_18653870_1	chr16	+	1828	12	FSM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	27	141	0	-136	multi-exon	FALSE	canonical	3	393	junction_10	35.0072011482124	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTACTGTTTTATTGT	NA	False	NA	NA	False	NA	NA	NA	18631070	18653870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUSG00000005262.14_18631071_18653870_2	chr16	+	1802	12	NIC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	0	-136	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	122.971810248132	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTACTGTTTTATTGT	NA	False	NA	NA	False	NA	NA	NA	18631070	18653870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_18631168_18633579_18633687_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUSG00000005262.14_18631071_18654006_1	chr16	+	1938	12	NIC	ENSMUSG00000005262.14	novel	2078	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	122.971810248132	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGTTTGATATGGTAT	NA	False	NA	5	True	AATAAA	-15	NA	18631070	18654006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_18631168_18633579_18633687_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUSG00000005354.17_77799410_77813174_1	chr15	-	1103	4	FSM	ENSMUSG00000005354.17	ENSMUST00000005487.12	1298	4	32	163	0	0	multi-exon	FALSE	canonical	3	1083	junction_2	92.120693778446	1595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTACCTCTTGCTGTGAA	2747	False	NA	-7	True	AATAAA	-16	NA	77813174	77799409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_77800058_77808742_77808867_77811891_77812155_77813106
ENSMUSG00000005360.15_8686659_8739965_1	chr15	-	998	5	NNC	ENSMUSG00000005360.15	novel	964	3	NA	NA	0	-14919	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	26.9953699733862	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTTTGCAGCCTGAGAA	NA	False	NA	NA	False	AATAAA	-17	NA	8739965	8686658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_8686996_8717194_8717297_8717771_8717910_8738045_8738324_8739822
ENSMUSG00000005360.15_8710216_8739965_1	chr15	-	1106	5	FSM	ENSMUSG00000005360.15	ENSMUST00000153455.8	1252	5	-65	211	0	-211	multi-exon	FALSE	canonical	3	13	junction_1	23.8156986040721	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTGTCAGCATCTTT	NA	False	NA	NA	False	AATATA	-10	NA	8739965	8710215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_8710661_8717194_8717297_8717771_8717910_8738045_8738324_8739822
ENSMUSG00000005360.15_8710376_8739965_1	chr15	-	946	5	FSM	ENSMUSG00000005360.15	ENSMUST00000153455.8	1252	5	-65	371	0	-371	multi-exon	FALSE	canonical	3	13	junction_1	23.8156986040721	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCAACACTGGATAGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	8739965	8710375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_8710661_8717194_8717297_8717771_8717910_8738045_8738324_8739822
ENSMUSG00000005362.15_106746102_106759435_1	chr6	-	2243	9	Genic_Genomic	ENSMUSG00000005362.15	novel	2072	11	NA	NA	16559	11060	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCACGCACGAAGAGCCG	NA	False	NA	NA	False	NA	NA	NA	106759435	106746101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_106746153_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ENSMUSG00000005362.15_106746174_106759435_1	chr6	-	2059	9	Genic_Genomic	ENSMUSG00000005362.15	novel	2072	11	NA	NA	16559	10988	multi-exon	FALSE	non_canonical	0	0	junction_1	0	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCCGAAGACCCGCTTA	NA	False	NA	NA	False	NA	NA	NA	106759435	106746173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756252_106758607
ENSMUSG00000005362.15_106746174_106759435_2	chr6	-	2350	10	Genic_Genomic	ENSMUSG00000005362.15	novel	2072	11	NA	NA	16559	10988	multi-exon	FALSE	non_canonical	0	0	junction_1	0	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCCGAAGACCCGCTTA	NA	False	NA	NA	False	NA	NA	NA	106759435	106746173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_106746218_106746790_106746965_106747762_106747877_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ENSMUSG00000005362.15_106746174_106759435_3	chr6	-	2227	9	Genic_Genomic	ENSMUSG00000005362.15	novel	2072	11	NA	NA	16559	10988	multi-exon	FALSE	non_canonical	0	0	junction_1	0	818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCCGAAGACCCGCTTA	NA	False	NA	NA	False	NA	NA	NA	106759435	106746173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753198_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ENSMUSG00000005362.15_106757162_106777022_1	chr6	-	2065	11	NNC	ENSMUSG00000005362.15	novel	2084	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	69.3326041628324	613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCTCCTTAATGTCATT	NA	False	NA	-33	True	AATAAA	-17	NA	106777022	106757161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761435_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
ENSMUSG00000005370.5_88282490_88293938_1	chr17	+	2779	4	ISM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	0	4382	0	1731	5prime_fragment	FALSE	canonical	3	2207	junction_2	20.0720922897661	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCTGACCTGACTGCA	NA	False	NA	NA	False	AAAAAG	-12	NA	88282489	88293938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873
ENSMUSG00000005370.5_88293913_88298320_1	chr17	+	1498	7	ISM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	11423	0	6782	0	3prime_fragment	FALSE	canonical	3	2616	junction_4	121.673972383397	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88293912	88298320	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ENSMUSG00000005374.14_135178540_135188731_1	chr5	+	1576	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	29	5883	0	56	multi-exon	FALSE	canonical	3	208	junction_3	17.4610678049451	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTTTTCTCACAGGCC	9519	False	NA	NA	False	NA	NA	NA	135178539	135188731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ENSMUSG00000005374.14_135178540_135191519_1	chr5	+	4364	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	29	3095	0	2844	multi-exon	FALSE	canonical	3	208	junction_3	17.4610678049451	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGGTGATTCTTTGCTT	9519	False	NA	6	True	NA	NA	NA	135178539	135191519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ENSMUSG00000005378.18_135081813_135082970_1	chr5	-	1034	2	ISM	ENSMUSG00000005378.18	ENSMUST00000129691.8	833	5	2811	2	2611	0	3prime_fragment	FALSE	canonical	3	1046	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	False	NA	-3	True	ATTAAA	-14	NA	135082970	135081812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_135082279_135082402
ENSMUSG00000005378.18_135081813_135092944_1	chr5	-	1264	11	NNC	ENSMUSG00000005378.18	novel	1607	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	308.621143151275	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	False	NA	-3	True	ATTAAA	-14	NA	135092944	135081812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092851
ENSMUSG00000005378.18_135081813_135092944_2	chr5	-	1277	11	NNC	ENSMUSG00000005378.18	novel	1169	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	316.302529234276	1659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	False	NA	-3	True	ATTAAA	-14	NA	135092944	135081812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_135082279_135082402_135082493_135084881_135084974_135085691_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867
ENSMUSG00000005378.18_135081813_135092944_3	chr5	-	1280	12	NNC	ENSMUSG00000005378.18	novel	1516	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	300.297153108865	2571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	False	NA	-3	True	ATTAAA	-14	NA	135092944	135081812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085776_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867
ENSMUSG00000005378.18_135081813_135092944_5	chr5	-	1270	11	NNC	ENSMUSG00000005378.18	novel	1607	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	308.621143151275	2502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	False	NA	-3	True	ATTAAA	-14	NA	135092944	135081812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092845
ENSMUSG00000005397.9_13612136_13686477_1	chr13	+	5714	20	FSM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	0	377	0	-377	multi-exon	TRUE	canonical	0	0	junction_7	184.261632008595	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTACCTCCACCTCGAC	NA	False	NA	NA	False	NA	NA	NA	13612135	13686477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ENSMUSG00000005397.9_13612252_13686854_1	chr13	+	5975	20	FSM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	116	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	184.261632008595	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATGTGTTTTTGCTGT	NA	False	NA	12	True	ATTAAA	-27	NA	13612251	13686854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ENSMUSG00000005410.7_75836197_75853964_1	chr8	+	2278	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	0	1103	0	-352	multi-exon	FALSE	canonical	3	795	junction_1	234.54782794507	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACCCTCAAGCCTGAAAT	NA	False	NA	NA	False	NA	NA	NA	75836196	75853964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ENSMUSG00000005410.7_75836197_75853964_2	chr8	+	2254	17	FSM	ENSMUSG00000005410.7	ENSMUST00000212426.2	2604	17	-7	357	0	-352	multi-exon	FALSE	canonical	3	635	junction_1	269.284113147712	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACCCTCAAGCCTGAAAT	NA	False	NA	NA	False	NA	NA	NA	75836196	75853964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ENSMUSG00000005410.7_75836197_75854325_1	chr8	+	2632	17	NNC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	450.337581709544	2496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	36	True	NA	NA	NA	75836196	75854325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844156_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ENSMUSG00000005410.7_75836197_75854325_2	chr8	+	2639	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	0	742	0	4	multi-exon	FALSE	canonical	3	795	junction_1	234.54782794507	4341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	36	True	NA	NA	NA	75836196	75854325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ENSMUSG00000005410.7_75836197_75854325_3	chr8	+	2609	17	NNC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	469.34415677624	1812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	36	True	NA	NA	NA	75836196	75854325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_75836226_75836327_75836503_75836717_75836845_75836933_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ENSMUSG00000005410.7_75836197_75854325_4	chr8	+	2633	17	NNC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	452.403511812187	3099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	36	True	NA	NA	NA	75836196	75854325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_75836250_75836327_75836503_75836717_75836845_75836933_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ENSMUSG00000005413.9_75820249_75827218_1	chr8	+	1572	5	NNC	ENSMUSG00000005413.9	novel	1569	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.358456772798	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAAGTGCATTCATGTCT	NA	False	NA	11	True	AATAAA	-20	NA	75820248	75827218	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_75820413_75822493_75822605_75823477_75823970_75825393_75825494_75826513
ENSMUSG00000005413.9_75820249_75827218_2	chr8	+	475	2	NNC	ENSMUSG00000005413.9	novel	1569	5	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAAGTGCATTCATGTCT	NA	False	NA	11	True	AATAAA	-20	NA	75820248	75827218	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_75820362_75826856
ENSMUSG00000005413.9_75820369_75827218_2	chr8	+	1607	5	NNC	ENSMUSG00000005413.9	novel	1569	5	NA	NA	120	1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	92.3102784092866	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAAGTGCATTCATGTCT	NA	False	NA	11	True	AATAAA	-20	NA	75820368	75827218	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_75820558_75822483_75822605_75823477_75823970_75825393_75825494_75826513
ENSMUSG00000005447.13_24994474_24997307_1	chr7	-	1169	5	FSM	ENSMUSG00000005447.13	ENSMUST00000148150.8	859	5	0	-310	0	0	multi-exon	TRUE	canonical	3	385	junction_2	17.4570902500961	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	8603	False	NA	-2	True	ATTAAA	-15	NA	24997307	24994473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796
ENSMUSG00000005465.10_84752704_84756932_1	chr8	-	2472	5	NIC	ENSMUSG00000005465.10	novel	2664	14	NA	NA	12237	4219	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCGAGAGGGGCGGGGC	NA	False	NA	NA	False	GGGGCT	-16	NA	84756932	84752703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
ENSMUSG00000005470.9_84682343_84696826_1	chr8	+	1581	4	FSM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	207	0	0	0	multi-exon	FALSE	canonical	3	543	junction_2	3.39934634239519	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGCTTTTTTCTCTC	5923	False	NA	23	True	AATAAA	-16	NA	84682342	84696826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_84682567_84691659_84691776_84694462_84694640_84695762
ENSMUSG00000005510.10_90724980_90735046_1	chr2	-	921	7	FSM	ENSMUSG00000005510.10	ENSMUST00000005647.4	1046	7	125	0	0	0	multi-exon	FALSE	canonical	3	1877	junction_6	40.2105569333339	4257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTTCCTCTGTGGTGGT	NA	False	NA	-11	True	AATAAA	-16	NA	90735046	90724979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
ENSMUSG00000005514.15_135698887_135764180_1	chr5	+	2503	16	NIC	ENSMUSG00000005514.15	novel	918	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	64.9938116712319	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTGTTGATTGAG	1634	False	NA	14	True	AATAAA	-14	NA	135698886	135764180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_135698971_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ENSMUSG00000005514.15_135718012_135764180_1	chr5	+	2508	16	NNC	ENSMUSG00000005514.15	novel	2636	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	67.5220457825936	715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTGTTGATTGAG	2023	False	NA	14	True	AATAAA	-14	NA	135718011	135764180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760031_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ENSMUSG00000005566.15_12758332_12764962_1	chr7	+	127	2	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	253	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758331	12764962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_12758393_12764896
ENSMUSG00000005566.15_12758784_12764962_1	chr7	+	2540	17	FSM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	705	0	705	0	multi-exon	FALSE	canonical	3	3307	junction_7	380.550172242439	2769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758783	12764962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ENSMUSG00000005566.15_12758898_12764962_1	chr7	+	2426	17	FSM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	819	0	-787	0	multi-exon	FALSE	canonical	3	3307	junction_7	380.550172242439	2770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758897	12764962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ENSMUSG00000005610.18_110669936_110682224_1	chr7	-	5003	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	13	2979	0	1203	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	13288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTTTTTCTTCATTT	NA	False	NA	-5	True	AATAAA	-15	NA	110682224	110669935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ENSMUSG00000005610.18_110671139_110682224_1	chr7	-	3686	21	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	0	0	0	0	intron_retention	FALSE	canonical	3	1102	junction_8	1132.63140517999	7793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682224	110671138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ENSMUSG00000005610.18_110671139_110682224_2	chr7	-	3800	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	13	4182	0	0	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	12344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682224	110671138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ENSMUSG00000005610.18_110673583_110682224_1	chr7	-	2598	19	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	0	-238	intron_retention	FALSE	canonical	0	0	junction_8	1364.60471484521	5225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGATAAAGGATTCGTGA	NA	False	NA	NA	False	ATTAAA	-24	NA	110682224	110673582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676437_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ENSMUSG00000005615.16_32249739_32290648_1	chr16	+	1552	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-3	3240	0	-207	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAGAACTAATTTTTT	2486	False	NA	NA	False	AATATA	-1	NA	32249738	32290648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
ENSMUSG00000005615.16_32249739_32290855_1	chr16	+	1759	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-3	3033	0	0	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTAGCTCCAGATTCCC	2486	False	NA	NA	False	NA	NA	NA	32249738	32290855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
ENSMUSG00000005625.16_94940016_94949883_1	chr3	-	615	5	NNC	ENSMUSG00000005625.16	novel	2120	7	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	877.46866040902	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTTTTGCTTCAAATAG	NA	False	NA	-21	True	AATAAA	-14	NA	94949883	94940015	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_94940296_94940792_94940824_94943137_94943236_94943915_94944057_94949818
ENSMUSG00000005656.10_54793572_54842453_1	chr12	-	1455	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	35	438	-4	-137	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTTCTTTGAGAAGCC	NA	False	NA	NA	False	NA	NA	NA	54842453	54793571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ENSMUSG00000005656.10_54798361_54842472_1	chr12	-	1407	13	ISM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	16	5227	0	-4926	5prime_fragment	FALSE	canonical	3	824	junction_1	124.818840947813	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAATTATGTAATTTTA	NA	False	NA	NA	False	NA	NA	NA	54842472	54798360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ENSMUSG00000005667.9_83282965_83294539_1	chr6	-	616	3	NNC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	-4	-292	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1349.5	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGTTGTGTGTCTGTTTT	NA	False	NA	-3	True	TTTAAA	-23	NA	83294539	83282964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_83283397_83290473_83290529_83294410
ENSMUSG00000005667.9_83283384_83294539_1	chr6	-	1325	8	FSM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	49	711	-4	0	multi-exon	FALSE	canonical	3	2400	junction_5	123.349677166756	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGCCGTTTTAGGCTCT	NA	False	NA	NA	False	NA	NA	NA	83294539	83283383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ENSMUSG00000005667.9_83287237_83294539_1	chr6	-	855	5	ISM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	49	4564	-4	-703	5prime_fragment	FALSE	canonical	3	2400	junction_2	112.67514144655	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAGTTATGGCTTATAT	NA	False	NA	NA	False	AATAAA	-24	NA	83294539	83287236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ENSMUSG00000005672.13_75735615_75815105_1	chr5	+	2925	21	FSM	ENSMUSG00000005672.13	ENSMUST00000144270.8	5241	21	39	2277	0	1589	multi-exon	FALSE	canonical	3	795	junction_9	132.566766197264	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGAACCCCGTGGTGG	766	False	NA	NA	False	NA	NA	NA	75735614	75815105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ENSMUSG00000005672.13_75735615_75815224_1	chr5	+	3044	21	FSM	ENSMUSG00000005672.13	ENSMUST00000144270.8	5241	21	39	2158	0	1708	multi-exon	FALSE	canonical	3	795	junction_9	132.566766197264	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTTGCTGCTGTCTCCG	766	False	NA	NA	False	NA	NA	NA	75735614	75815224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ENSMUSG00000005677.15_171046680_171050020_1	chr1	+	1549	10	NIC	ENSMUSG00000005677.15	novel	2980	7	NA	NA	4762	1750	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGAACTGCAGCTTCACC	NA	False	NA	NA	False	NA	NA	NA	171046679	171050020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
ENSMUSG00000005677.15_171046680_171050020_2	chr1	+	1449	10	NIC	ENSMUSG00000005677.15	novel	2980	7	NA	NA	4762	1750	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGAACTGCAGCTTCACC	NA	False	NA	NA	False	NA	NA	NA	171046679	171050020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049623_171049943
ENSMUSG00000005677.15_171046784_171050020_1	chr1	+	1445	10	NIC	ENSMUSG00000005677.15	novel	2980	7	NA	NA	4866	1750	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGAACTGCAGCTTCACC	NA	False	NA	NA	False	NA	NA	NA	171046783	171050020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
ENSMUSG00000005681.13_171049437_171053942_1	chr1	+	558	4	NNC	ENSMUSG00000005681.13	novel	518	4	NA	NA	-3186	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	55.1180551180827	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGCCTCTTGTGTCTT	NA	False	NA	11	True	AATAAA	-17	NA	171049436	171053942	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_171049548_171052852_171052936_171053234_171053368_171053711
ENSMUSG00000005681.13_171049437_171053942_2	chr1	+	560	4	NNC	ENSMUSG00000005681.13	novel	518	4	NA	NA	-3186	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.0467198900061	892	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGCCTCTTGTGTCTT	NA	False	NA	11	True	AATAAA	-17	NA	171049436	171053942	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_171049553_171052855_171052936_171053234_171053368_171053711
ENSMUSG00000005681.13_171049437_171053942_3	chr1	+	555	4	NNC	ENSMUSG00000005681.13	novel	518	4	NA	NA	-3186	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	24.4176620957499	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGCCTCTTGTGTCTT	NA	False	NA	11	True	AATAAA	-17	NA	171049436	171053942	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_171049548_171052855_171052936_171053234_171053368_171053711
ENSMUSG00000005683.9_128173679_128197083_1	chr10	+	1585	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	76	1265	0	-1265	multi-exon	FALSE	canonical	3	1246	junction_9	132.722869167299	2681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCCTTTAAGACTTAAGA	NA	False	NA	26	True	AATAAA	-22	NA	128173678	128197083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ENSMUSG00000005687.15_103079065_103085964_1	chr3	+	869	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	94	504	0	-177	multi-exon	FALSE	canonical	3	3472	junction_4	166.601987449797	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTTTTCAGAATGAGTA	5023	False	NA	18	True	AATAAA	-36	NA	103079064	103085964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ENSMUSG00000005687.15_103079065_103086144_1	chr3	+	1049	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	94	324	0	1	multi-exon	FALSE	canonical	3	3472	junction_4	166.601987449797	11759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTGGCTATAGT	5023	False	NA	49	True	AATAAA	-17	NA	103079064	103086144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ENSMUSG00000005687.15_103079065_103086144_2	chr3	+	1043	7	NNC	ENSMUSG00000005687.15	novel	1467	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1425.34272681657	11657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTGGCTATAGT	5023	False	NA	49	True	AATAAA	-17	NA	103079064	103086144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082980_103084654_103084736_103085670
ENSMUSG00000005698.16_106406734_106409554_1	chr8	+	1646	2	ISM	ENSMUSG00000005698.16	ENSMUST00000005841.16	3782	12	43523	0	4091	0	3prime_fragment	FALSE	canonical	3	412	junction_1	0	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	6681	False	NA	38	True	AATAAA	-21	NA	106406733	106409554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_106406892_106408066
ENSMUSG00000005698.16_106406849_106409554_1	chr8	+	1531	2	ISM	ENSMUSG00000005698.16	ENSMUST00000005841.16	3782	12	43638	0	4206	0	3prime_fragment	FALSE	canonical	3	412	junction_1	0	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	6796	False	NA	38	True	AATAAA	-21	NA	106406848	106409554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_106406892_106408066
ENSMUSG00000005699.17_106427786_106430128_1	chr8	+	1245	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212634.2	678	3	6	-573	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCCTTCTGTGTCCCA	NA	False	NA	14	True	ATTAAA	-20	NA	106427785	106430128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106427919_106428805_106429029_106429239
ENSMUSG00000005732.15_18057841_18066596_1	chr16	-	892	6	FSM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	0	193	0	-175	multi-exon	FALSE	canonical	3	10558	junction_4	1553.51498222579	8604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGGTTGTTTTTTTGT	7133	False	NA	31	True	TATAAA	-15	NA	18066596	18057840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ENSMUSG00000005732.15_18057896_18066516_1	chr16	-	757	6	FSM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	80	248	-6	-230	multi-exon	FALSE	canonical	3	10558	junction_4	1553.51498222579	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGTTTTTCTGTTTTGT	7213	False	NA	-24	True	TTTAAA	-20	NA	18066516	18057895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ENSMUSG00000005779.13_94791633_94794272_1	chr3	-	954	7	FSM	ENSMUSG00000005779.13	ENSMUST00000005923.7	1183	7	0	229	0	0	multi-exon	FALSE	canonical	3	1538	junction_1	134.402380931292	7298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGGATTTTGTGTTT	NA	False	NA	-3	True	AATAAA	-21	NA	94794272	94791632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_94791752_94791981_94792071_94792227_94792345_94792970_94793053_94793385_94793533_94793751_94793959_94794079
ENSMUSG00000005813.13_138164717_138195159_2	chr3	-	2569	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	117	0	0	0	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTTTTTCTAGTTGTA	NA	False	NA	-9	True	ATTAAA	-15	NA	138195159	138164716	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ENSMUSG00000005813.13_138165895_138195159_1	chr3	-	1391	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	117	1178	0	-453	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGCCTCACCCCCTCA	NA	False	NA	-2	True	AATAAA	-25	NA	138195159	138165894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ENSMUSG00000005813.13_138166041_138195159_1	chr3	-	1245	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	117	1324	0	-599	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGAAATGAAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	138195159	138166040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ENSMUSG00000005823.10_57541944_57554362_1	chr17	-	1992	17	NNC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	301	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_16	49.7622079870859	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGGGGAGGACCACCTG	NA	False	NA	-31	True	AATAAA	-18	NA	57554362	57541943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554304
ENSMUSG00000005823.10_57541944_57554663_1	chr17	-	2087	17	FSM	ENSMUSG00000005823.10	ENSMUST00000233568.2	2405	17	9	309	0	0	multi-exon	FALSE	canonical	3	119	junction_12	26.3293443708726	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGGGGAGGACCACCTG	NA	False	NA	-31	True	AATAAA	-18	NA	57554663	57541943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ENSMUSG00000005846.13_11010834_11021149_1	chr16	-	1490	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1172.26895378151	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	1000	False	NA	-3	True	ATTAAA	-25	NA	11021149	11010833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_11011344_11012474_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005846.13_11010834_11021149_2	chr16	-	1885	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1194.85699981211	1548	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	1000	False	NA	-3	True	ATTAAA	-25	NA	11021149	11010833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_11011602_11012323_11012562_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005846.13_11010834_11021149_3	chr16	-	477	4	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1366.6017057732	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	1000	False	NA	-3	True	ATTAAA	-25	NA	11021149	11010833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_11010930_11019188_11019295_11020181_11020322_11021014
ENSMUSG00000005846.13_11010834_11021149_4	chr16	-	1890	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1178.39859555246	2475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	1000	False	NA	-3	True	ATTAAA	-25	NA	11021149	11010833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_11011602_11012323_11012576_11014137_11014252_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005846.13_11010834_11021149_5	chr16	-	1890	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1194.64136224015	4424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	1000	False	NA	-3	True	ATTAAA	-25	NA	11021149	11010833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_11011602_11012323_11012567_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005846.13_11010834_11021149_6	chr16	-	1975	8	NIC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_7	966.910543949129	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	1000	False	NA	-3	True	ATTAAA	-25	NA	11021149	11010833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_11011602_11012323_11012576_11014137_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005846.13_11010834_11021149_7	chr16	-	562	4	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1366.6017057732	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	1000	False	NA	-3	True	ATTAAA	-25	NA	11021149	11010833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_11010985_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005846.13_11010834_11021149_8	chr16	-	1892	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1172.26895378151	2599	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	1000	False	NA	-3	True	ATTAAA	-25	NA	11021149	11010833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_11011595_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005846.13_11010834_11021203_1	chr16	-	2029	8	NIC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_7	966.910543949129	1844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	946	False	NA	-3	True	ATTAAA	-25	NA	11021203	11010833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_11011602_11012323_11012576_11014137_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005846.13_11010834_11021203_3	chr16	-	1944	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1178.39859555246	4960	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	946	False	NA	-3	True	ATTAAA	-25	NA	11021203	11010833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_11011602_11012323_11012576_11014137_11014252_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005846.13_11010834_11021203_4	chr16	-	1944	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1194.64136224015	6354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	946	False	NA	-3	True	ATTAAA	-25	NA	11021203	11010833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_11011602_11012323_11012567_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005873.7_34480045_34506433_1	chr18	-	747	5	NNC	ENSMUSG00000005873.7	novel	2852	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	239.394026658979	2462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGCCTTTGTTGTC	5550	False	NA	-5	True	ATTAAA	-18	NA	34506433	34480044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_34480213_34482687_34482857_34490144_34490284_34505457_34505552_34506256
ENSMUSG00000005873.7_34480045_34506433_2	chr18	-	756	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	-11	2107	-11	0	multi-exon	FALSE	canonical	3	477	junction_1	38.3495436739474	2469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGCCTTTGTTGTC	5550	False	NA	-5	True	ATTAAA	-18	NA	34506433	34480044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
ENSMUSG00000005881.14_155850026_155860199_1	chr2	+	1302	12	NIC	ENSMUSG00000005881.14	novel	1349	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	261.145189343697	2679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCTCAGTGTGATT	NA	False	NA	16	True	AATAAA	-19	NA	155850025	155860199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155858607_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ENSMUSG00000005881.14_155850026_155860199_2	chr2	+	1157	11	NIC	ENSMUSG00000005881.14	novel	1377	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	252.247675906043	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCTCAGTGTGATT	NA	False	NA	16	True	AATAAA	-19	NA	155850025	155860199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_155850149_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ENSMUSG00000005881.14_155850026_155860199_3	chr2	+	1309	13	NNC	ENSMUSG00000005881.14	novel	1377	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	249.477272957322	2930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCTCAGTGTGATT	NA	False	NA	16	True	AATAAA	-19	NA	155850025	155860199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_155850149_155850284_155850356_155850483_155850572_155850786_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ENSMUSG00000005881.14_155850143_155860199_1	chr2	+	1199	13	FSM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	178	0	0	0	multi-exon	FALSE	canonical	3	758	junction_4	74.7846445171437	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCTCAGTGTGATT	NA	False	NA	16	True	AATAAA	-19	NA	155850142	155860199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ENSMUSG00000005882.19_155689867_155771970_2	chr2	-	1347	10	FSM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	260	1026	0	0	multi-exon	FALSE	canonical	3	315	junction_1	57.3294572333165	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTTTTCTTTGTTCCA	NA	False	NA	-4	True	ATTAAA	-20	NA	155771970	155689866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ENSMUSG00000005882.19_155690179_155771970_1	chr2	-	1035	10	FSM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	260	1338	0	0	multi-exon	FALSE	canonical	3	315	junction_1	57.3294572333165	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTGTTGAGTTTCTTCT	NA	False	NA	-10	True	NA	NA	NA	155771970	155690178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ENSMUSG00000005893.15_92146493_92160975_1	chr6	+	740	5	NNC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	5335	9700	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCGCGGACCAGCGCGGC	9641	False	NA	NA	False	NA	NA	NA	92146492	92160975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_92146500_92151806_92152190_92152689_92152778_92155690_92155798_92160820
ENSMUSG00000005893.15_92151098_92160975_1	chr6	+	1442	4	NIC	ENSMUSG00000005893.15	novel	1174	3	NA	NA	9940	9700	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	4312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCGCGGACCAGCGCGGC	NA	False	NA	NA	False	NA	NA	NA	92151097	92160975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_92152190_92152689_92152778_92155690_92155798_92160820
ENSMUSG00000005899.15_17437221_17461363_1	chr16	+	3201	19	FSM	ENSMUSG00000005899.15	ENSMUST00000165363.10	3046	19	-3	-152	0	152	multi-exon	FALSE	canonical	0	0	junction_13	65.2123075939534	434	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGGGCTGAATCTT	NA	False	NA	4	True	AATAAA	-17	NA	17437220	17461363	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457707_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ENSMUSG00000005936.20_29171426_29186905_1	chr17	+	2384	8	FSM	ENSMUSG00000005936.20	ENSMUST00000233197.2	4196	8	194	1618	0	0	multi-exon	FALSE	canonical	3	151	junction_2	164.609370626217	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCTCTCCAGTATTGAA	NA	False	NA	4	True	AATAAA	-15	NA	29171425	29186905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29171544_29176852_29177032_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ENSMUSG00000005936.20_29171477_29188523_1	chr17	+	3951	8	FSM	ENSMUSG00000005936.20	ENSMUST00000233197.2	4196	8	245	0	0	0	multi-exon	FALSE	canonical	3	151	junction_2	164.609370626217	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171476	29188523	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29171544_29176852_29177032_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ENSMUSG00000005947.12_73029271_73038272_1	chr11	+	766	5	ISM	ENSMUSG00000005947.12	ENSMUST00000006101.4	3845	31	47862	0	47862	0	3prime_fragment	FALSE	canonical	3	28	junction_3	3.24037034920393	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGTTGTTTGAGACA	NA	False	NA	9	True	ATTAAA	-18	NA	73029270	73038272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_73029338_73029592_73029689_73031492_73031589_73036366_73036478_73037876
ENSMUSG00000005949.10_73075320_73089868_1	chr11	-	1672	11	FSM	ENSMUSG00000005949.10	ENSMUST00000006103.9	2570	11	0	898	0	-897	multi-exon	FALSE	canonical	3	46	junction_10	9.23525852372309	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATATTTCTGGGAGCAG	4465	False	NA	NA	False	NA	NA	NA	73089868	73075319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
ENSMUSG00000005968.15_94520064_94665453_1	chr3	-	2521	12	Fusion	ENSMUSG00000081355.2_ENSMUSG00000005968.15	novel	2631	13	NA	NA	-30	0	multi-exon	FALSE	non_canonical	3	14	junction_10	28.4119634911332	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCCGTGGGTCTTTTA	NA	False	NA	-5	True	AATAAA	-16	NA	94665453	94520063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94629191_94629282_94630124_94630212_94640266_94640369_94665341
ENSMUSG00000005968.15_94520064_94665453_2	chr3	-	2596	13	Fusion	ENSMUSG00000081355.2_ENSMUSG00000005968.15	novel	2631	13	NA	NA	-30	0	multi-exon	FALSE	non_canonical	2	2	junction_11	35.2950854306312	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCCGTGGGTCTTTTA	NA	False	NA	-5	True	AATAAA	-16	NA	94665453	94520063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94629191_94629282_94630124_94630212_94640266_94640369_94640735_94640811_94665341
ENSMUSG00000005973.7_105217274_105229664_1	chr2	-	2082	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	0	638	0	0	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229664	105217273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ENSMUSG00000005973.7_105217690_105229664_1	chr2	-	1666	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	0	1054	0	-416	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGTTTTGTTTTTAAC	NA	False	NA	-23	True	AATAAA	-14	NA	105229664	105217689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ENSMUSG00000005980.16_3857835_3895662_1	chr16	+	2291	18	NIC	ENSMUSG00000005980.16	novel	1286	10	NA	NA	841	37774	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2635	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAACAGCCTAACAGAGT	NA	False	NA	NA	False	NA	NA	NA	3857834	3895662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ENSMUSG00000005980.16_3857835_3895662_2	chr16	+	2284	18	NNC	ENSMUSG00000005980.16	novel	1286	10	NA	NA	841	37774	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAACAGCCTAACAGAGT	NA	False	NA	NA	False	NA	NA	NA	3857834	3895662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880200_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ENSMUSG00000005980.16_3857835_3895662_3	chr16	+	2284	18	NNC	ENSMUSG00000005980.16	novel	1286	10	NA	NA	841	37774	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1219	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAACAGCCTAACAGAGT	NA	False	NA	NA	False	NA	NA	NA	3857834	3895662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874200_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ENSMUSG00000005980.16_3857835_3895662_4	chr16	+	2284	18	NNC	ENSMUSG00000005980.16	novel	1286	10	NA	NA	841	37774	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	988	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAACAGCCTAACAGAGT	NA	False	NA	NA	False	NA	NA	NA	3857834	3895662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886727_3886886_3895556
ENSMUSG00000005981.12_3857835_3895662_1	chr16	-	3035	17	NIC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-23	0	intron_retention	TRUE	canonical	3	963	junction_14	113.904410993385	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	False	NA	-3	True	ATTAAA	-22	NA	3895662	3857834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ENSMUSG00000005981.12_3857835_3895662_2	chr16	-	2286	18	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	289.243446989379	1590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	False	NA	-3	True	ATTAAA	-22	NA	3895662	3857834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886881_3895556
ENSMUSG00000005981.12_3857835_3895662_3	chr16	-	2285	18	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	289.820825212136	1281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	False	NA	-3	True	ATTAAA	-22	NA	3895662	3857834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862482_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ENSMUSG00000005982.15_3702532_3722527_2	chr16	+	2258	7	FSM	ENSMUSG00000005982.15	ENSMUST00000186375.8	2350	7	-15	107	0	-106	multi-exon	FALSE	canonical	1	49	junction_5	41.1774614726713	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCTGTCTCCCTTTAGT	NA	False	NA	-68	True	CATAAA	-16	NA	3702531	3722527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718742_3719646_3719990_3721329
ENSMUSG00000005982.15_3702532_3722634_2	chr16	+	2375	7	NNC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_6	52.451300163951	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	False	NA	39	True	AATAAA	-20	NA	3702531	3722634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718742_3719646_3720000_3721329
ENSMUSG00000005982.15_3702532_3722634_3	chr16	+	2249	6	NIC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	18	junction_1	49.660447037859	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	False	NA	39	True	AATAAA	-20	NA	3702531	3722634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_3702671_3715114_3715245_3717735_3717833_3718506_3718742_3719646_3719990_3721329
ENSMUSG00000005983.16_3702532_3722634_1	chr16	-	781	6	NNC	ENSMUSG00000005983.16	novel	2592	3	NA	NA	2881	10511	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	75	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCCCGCGGCACTTCCG	736	False	NA	NA	False	NA	NA	NA	3722634	3702531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718742_3722570
ENSMUSG00000006005.19_150308340_150325686_1	chr1	+	2351	18	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	39339	0	2165	0	3prime_fragment	TRUE	canonical	3	550	junction_9	61.9374056167424	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTTTCTTCATTTCA	NA	False	NA	25	True	AATAAA	-24	NA	150308339	150325686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ENSMUSG00000006007.15_150203289_150209656_1	chr1	+	1265	4	NNC	ENSMUSG00000006007.15	novel	1246	4	NA	NA	8109	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGTGTAAAGCCTATCA	NA	False	NA	NA	False	AATAAA	-26	NA	150203288	150209656	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_150203392_150204066_150204152_150206476_150206623_150208725
ENSMUSG00000006010.15_150237064_150268501_1	chr1	-	2897	14	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	29.9368170945323	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTAATGTGGAATTTTA	963	False	NA	NA	False	AATAAA	-13	NA	150268501	150237063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264371_150265986_150266108_150268440
ENSMUSG00000006024.14_15832383_15851053_1	chr7	+	1670	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	0	847	0	389	multi-exon	TRUE	canonical	3	1130	junction_8	65.9754499795189	3312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGAGCTGTCCCTTT	NA	False	NA	30	True	AATAAA	-20	NA	15832382	15851053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ENSMUSG00000006024.14_15832533_15851053_1	chr7	+	1520	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	150	847	0	389	multi-exon	FALSE	canonical	3	1130	junction_8	65.9754499795189	3299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGAGCTGTCCCTTT	NA	False	NA	30	True	AATAAA	-20	NA	15832532	15851053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ENSMUSG00000006024.14_15832533_15851053_2	chr7	+	1514	11	NNC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	0	389	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	378.363793193799	3289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGAGCTGTCCCTTT	NA	False	NA	30	True	AATAAA	-20	NA	15832532	15851053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850394
ENSMUSG00000006050.13_36800299_36803343_1	chr18	-	883	5	NNC	ENSMUSG00000006050.13	novel	1979	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	616.079946110892	3989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCTGATGTCAGACTG	NA	False	NA	-9	True	NA	NA	NA	36803343	36800298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_36800713_36800843_36800953_36801704_36801896_36803056_36803183_36803300
ENSMUSG00000006050.13_36800299_36803343_2	chr18	-	883	5	FSM	ENSMUSG00000006050.13	ENSMUST00000006209.5	695	5	-5	-183	0	0	multi-exon	FALSE	canonical	3	109	junction_2	590.993443280042	3646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCTGATGTCAGACTG	NA	False	NA	-9	True	NA	NA	NA	36803343	36800298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_36800713_36800843_36800947_36801704_36801902_36803056_36803183_36803300
ENSMUSG00000006050.13_36800299_36803343_3	chr18	-	1007	4	FSM	ENSMUSG00000006050.13	ENSMUST00000173202.3	1299	4	318	-26	0	0	multi-exon	FALSE	canonical	3	1470	junction_2	40.4227658628155	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCTGATGTCAGACTG	NA	False	NA	-9	True	NA	NA	NA	36803343	36800298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056
ENSMUSG00000006057.16_95963816_95966498_1	chr11	-	579	5	FSM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	-2	4138	-2	0	multi-exon	FALSE	canonical	3	2808	junction_4	3276.79938163751	29914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCATGTGCCTGTGCCT	3477	False	NA	-9	True	NA	NA	NA	95966498	95963815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966452
ENSMUSG00000006095.13_29923562_29931164_1	chr7	-	877	6	FSM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	533	6	533	0	multi-exon	FALSE	canonical	3	839	junction_4	26.4529771481397	2841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGTGCAAGTCTCTT	NA	False	NA	-11	True	NA	NA	NA	29931164	29923561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
ENSMUSG00000006127.10_75521855_75538747_1	chr11	+	1688	12	FSM	ENSMUSG00000006127.10	ENSMUST00000006286.9	2679	12	41	950	0	57	multi-exon	FALSE	canonical	3	99	junction_6	22.5527847321246	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTGATTGAAACAGAGTA	5480	False	NA	31	True	AATACA	-16	NA	75521854	75538747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ENSMUSG00000006134.5_17269851_17302140_1	chr16	+	1884	3	FSM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	0	3158	0	149	multi-exon	FALSE	canonical	3	254	junction_1	8	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTCTGGCTGGTTTTCA	3459	False	NA	NA	False	AGTAAA	-28	NA	17269850	17302140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_17270653_17286756_17287223_17301524
ENSMUSG00000006200.4_36915924_36918734_2	chrX	+	873	4	FSM	ENSMUSG00000006200.4	ENSMUST00000006362.4	1010	4	137	0	137	0	multi-exon	FALSE	canonical	3	92	junction_1	47.588514020367	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGCTCCATTGTCTTGG	NA	False	NA	14	True	AATAAA	-18	NA	36915923	36918734	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36916057_36916242_36916703_36917291_36917338_36918500
ENSMUSG00000006216.11_141131664_141135644_1	chr4	-	832	6	NIC	ENSMUSG00000006216.11	novel	2370	20	NA	NA	-2976	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	42.4235783497809	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTCCCCTCTCCTCCC	4159	False	NA	-4	True	AATAAA	-18	NA	141135644	141131663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_141131944_141132063_141132151_141132582_141132672_141134399_141134534_141135114_141135329_141135616
ENSMUSG00000006216.11_141131664_141135644_2	chr4	-	916	7	ISM	ENSMUSG00000006216.11	ENSMUST00000006378.9	2370	20	7681	0	-2976	0	3prime_fragment	FALSE	canonical	3	53	junction_6	23.8146780135464	480	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTCCCCTCTCCTCCC	4159	False	NA	-4	True	AATAAA	-18	NA	141135644	141131663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_141131944_141132063_141132151_141132362_141132447_141132582_141132672_141134399_141134534_141135114_141135329_141135616
ENSMUSG00000006219.13_141303373_141325535_1	chr4	-	3070	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	1663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141325535	141303372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325424
ENSMUSG00000006219.13_141303373_141327343_1	chr4	-	3046	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327343	141303372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327256
ENSMUSG00000006219.13_141304032_141325535_1	chr4	-	2411	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	0	-659	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGAGGTAGCGGCGACCCA	NA	False	NA	-8	True	AATAAA	-17	NA	141325535	141304031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325424
ENSMUSG00000006219.13_141304032_141327199_1	chr4	-	2341	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	36	659	0	-659	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGAGGTAGCGGCGACCCA	NA	False	NA	-8	True	AATAAA	-17	NA	141327199	141304031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ENSMUSG00000006219.13_141304612_141325535_1	chr4	-	1831	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	0	-1239	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTTGGATTTGGGGGA	NA	False	NA	-34	True	NA	NA	NA	141325535	141304611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325424
ENSMUSG00000006219.13_141304612_141327199_1	chr4	-	1761	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	36	1239	0	-1239	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTTGGATTTGGGGGA	NA	False	NA	-34	True	NA	NA	NA	141327199	141304611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ENSMUSG00000006219.13_141304612_141327343_1	chr4	-	1807	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	0	-1239	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTTGGATTTGGGGGA	NA	False	NA	-34	True	NA	NA	NA	141327343	141304611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327256
ENSMUSG00000006241.17_21832309_21838852_2	chr9	+	638	4	NNC	ENSMUSG00000006241.17	novel	1531	13	NA	NA	-6458	-2449	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	60	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTGAGCGGAGTGAACG	5757	False	NA	NA	False	NA	NA	NA	21832308	21838852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_21832646_21837286_21837451_21837544_21837654_21838824
ENSMUSG00000006241.17_21832309_21838852_3	chr9	+	762	4	NNC	ENSMUSG00000006241.17	novel	1531	13	NA	NA	-6458	-2449	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTGAGCGGAGTGAACG	5757	False	NA	NA	False	NA	NA	NA	21832308	21838852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_21832646_21837286_21837451_21837544_21837654_21838700
ENSMUSG00000006276.11_73094845_73175318_1	chr8	-	2935	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	80.7011756547953	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAACATGAGACTATCTT	NA	False	NA	NA	False	TATAAA	-37	NA	73175318	73094844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_73095369_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ENSMUSG00000006276.11_73094845_73175318_2	chr8	-	2802	22	NIC	ENSMUSG00000006276.11	novel	2686	22	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	69.7814859566126	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAACATGAGACTATCTT	NA	False	NA	NA	False	TATAAA	-37	NA	73175318	73094844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ENSMUSG00000006289.15_51153143_51162145_1	chr14	-	1091	11	FSM	ENSMUSG00000006289.15	ENSMUST00000159292.8	3388	11	205	2092	0	0	multi-exon	FALSE	canonical	3	62	junction_9	170.895289578151	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTAGGTTGTGTTTTTC	NA	False	NA	-5	True	AATAAA	-20	NA	51162145	51153142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
ENSMUSG00000006289.15_51153143_51162308_1	chr14	-	1247	11	NNC	ENSMUSG00000006289.15	novel	3388	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	238.07706735425	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTAGGTTGTGTTTTTC	NA	False	NA	-5	True	AATAAA	-20	NA	51162308	51153142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154761_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
ENSMUSG00000006289.15_51153143_51162308_2	chr14	-	1254	11	FSM	ENSMUSG00000006289.15	ENSMUST00000159292.8	3388	11	42	2092	-8	0	multi-exon	FALSE	canonical	3	62	junction_9	170.895289578151	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTAGGTTGTGTTTTTC	NA	False	NA	-5	True	AATAAA	-20	NA	51162308	51153142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
ENSMUSG00000006304.15_74275709_74307368_2	chr1	+	441	6	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	781.384054098879	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	7881	False	NA	14	True	AATAAA	-19	NA	74275708	74307368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74307264
ENSMUSG00000006304.15_74275709_74307368_3	chr1	+	1593	10	FSM	ENSMUSG00000006304.15	ENSMUST00000006467.14	1404	10	33	-222	0	0	multi-exon	FALSE	canonical	3	1867	junction_3	197.32307280632	2910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	7881	False	NA	14	True	AATAAA	-19	NA	74275708	74307368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ENSMUSG00000006304.15_74275709_74307368_4	chr1	+	1381	10	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	741.807419020314	2553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	7881	False	NA	14	True	AATAAA	-19	NA	74275708	74307368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_74275770_74275976_74276059_74287260_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ENSMUSG00000006304.15_74275709_74307368_5	chr1	+	487	6	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	781.384054098879	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	7881	False	NA	14	True	AATAAA	-19	NA	74275708	74307368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290466_74307225
ENSMUSG00000006307.17_30268283_30273928_1	chr7	-	1671	10	ISM	ENSMUSG00000006307.17	ENSMUST00000131002.2	6345	35	10837	-2	-329	0	3prime_fragment	FALSE	canonical	3	26	junction_7	45.4116969758037	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	6451	False	NA	-23	True	AATAAA	-18	NA	30273928	30268282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270267_30273384_30273492_30273572_30273663_30273749
ENSMUSG00000006310.11_30289106_30298308_1	chr7	-	2035	5	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	-14	0	intron_retention	FALSE	canonical	3	42	junction_4	17.5267652463311	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30298308	30289105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30291391_30298204
ENSMUSG00000006310.11_30289106_30298308_2	chr7	-	939	5	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	27.8960122598195	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30298308	30289105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30298204
ENSMUSG00000006310.11_30289106_30302236_1	chr7	-	891	5	NNC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	-3902	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	33.9512518178638	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30302236	30289105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30302180
ENSMUSG00000006315.10_30427126_30428938_1	chr7	-	930	6	NIC	ENSMUSG00000006315.10	novel	870	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	739	junction_5	23.0685933684739	2289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	9284	False	NA	-12	True	AGTAAA	-18	NA	30428938	30427125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
ENSMUSG00000006333.15_3707041_3709896_1	chr7	+	876	6	NIC	ENSMUSG00000006333.15	novel	751	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	206	junction_4	6461.44068764854	111163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1313	False	NA	3	True	AATAAA	-18	NA	3707040	3709896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709006_3709181_3709649
ENSMUSG00000006335.17_3623323_3632578_1	chr7	-	786	6	FSM	ENSMUSG00000006335.17	ENSMUST00000155592.8	1091	6	305	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	68.2800117164606	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	-1	True	AATAAA	-16	NA	3632578	3623322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_3623474_3623775_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
ENSMUSG00000006345.11_75399982_75422025_1	chr10	+	2212	15	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	94.4297600962574	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGGACTTTAGTGTCT	NA	False	NA	27	True	NA	NA	NA	75399981	75422025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ENSMUSG00000006345.11_75404491_75422025_1	chr10	+	2329	14	NIC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	60.7702044712644	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGGACTTTAGTGTCT	NA	False	NA	27	True	NA	NA	NA	75404490	75422025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_75404804_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ENSMUSG00000006356.11_113104192_113109126_1	chr12	+	1098	7	NNC	ENSMUSG00000006356.11	novel	1439	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	281.572617434453	1318	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTGTCGTGTGTGTG	5958	False	NA	30	True	AATAAA	-23	NA	113104191	113109126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_113104235_113107083_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429_113108488_113108582
ENSMUSG00000006356.11_113104192_113109126_2	chr12	+	1098	7	NNC	ENSMUSG00000006356.11	novel	1439	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	282.521975546446	1341	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTGTCGTGTGTGTG	5958	False	NA	30	True	AATAAA	-23	NA	113104191	113109126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848_113107918_113108023_113108114_113108429_113108488_113108582
ENSMUSG00000006360.12_113115425_113117499_1	chr12	+	473	6	NNC	ENSMUSG00000006360.12	novel	445	5	NA	NA	-207	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	168.854256683093	1114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTGTTTTTGTCTGCT	NA	False	NA	15	True	AATAAA	-15	NA	113115424	113117499	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_113115521_113115701_113115774_113116900_113116996_113117074_113117133_113117237_113117285_113117394
ENSMUSG00000006360.12_113115425_113117499_2	chr12	+	654	5	FSM	ENSMUSG00000006360.12	ENSMUST00000006523.12	445	5	-207	-2	-207	0	multi-exon	FALSE	canonical	3	402	junction_4	13.838352503098	2366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTGTTTTTGTCTGCT	NA	False	NA	15	True	AATAAA	-15	NA	113115424	113117499	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_113115774_113116900_113116996_113117074_113117133_113117237_113117285_113117394
ENSMUSG00000006373.11_35861859_35868640_1	chrX	+	765	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	0	1092	0	-1092	multi-exon	FALSE	canonical	3	454	junction_1	42	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGAACTTGCTGTAAAT	1668	False	NA	NA	False	NA	NA	NA	35861858	35868640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_35862268_35865773_35865930_35868440
ENSMUSG00000006373.11_35861859_35868808_1	chrX	+	933	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	0	924	0	-924	multi-exon	FALSE	canonical	3	454	junction_1	42	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTACAATTTGATTTT	1668	False	NA	NA	False	NA	NA	NA	35861858	35868808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_35862268_35865773_35865930_35868440
ENSMUSG00000006378.16_78915101_78921662_1	chr15	+	1720	8	ISM	ENSMUSG00000116378.2	ENSMUST00000171999.9	1736	9	0	5069	0	-5069	5prime_fragment	FALSE	canonical	3	1189	junction_6	79.2711698371289	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCAGTCTGCTTTATTC	659	False	NA	14	True	NA	NA	NA	78915100	78921662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952
ENSMUSG00000006378.16_78915101_78921662_2	chr15	+	1452	9	FSM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	27	891	27	-891	multi-exon	FALSE	canonical	3	1189	junction_6	75.224663508719	3741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCAGTCTGCTTTATTC	659	False	NA	14	True	NA	NA	NA	78915100	78921662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ENSMUSG00000006378.16_78915101_78921662_3	chr15	+	1444	9	NNC	ENSMUSG00000006378.16	novel	2370	9	NA	NA	27	-891	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	433.666634640019	3709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCAGTCTGCTTTATTC	659	False	NA	14	True	NA	NA	NA	78915100	78921662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919984_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ENSMUSG00000006378.16_78915101_78921926_1	chr15	+	1716	9	FSM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	27	627	27	-627	multi-exon	FALSE	canonical	3	1189	junction_6	75.224663508719	3773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGTTCCTAGACCTGTG	659	False	NA	NA	False	GATAAA	-18	NA	78915100	78921926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ENSMUSG00000006390.16_118285316_118289811_1	chr4	+	1446	8	FSM	ENSMUSG00000006390.16	ENSMUST00000006557.13	1811	8	26	339	0	1	multi-exon	FALSE	canonical	3	108	junction_5	11.9505785019225	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGATTGTGTGTGTGTGT	NA	False	NA	2	True	ATTAAA	-15	NA	118285315	118289811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ENSMUSG00000006392.17_118266552_118272308_1	chr4	+	1154	7	NIC	ENSMUSG00000006392.17	novel	1145	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	252.819215162842	2298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	32	True	NA	NA	NA	118266551	118272308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_118266584_118268083_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ENSMUSG00000006392.17_118266552_118272308_2	chr4	+	1054	8	NNC	ENSMUSG00000006392.17	novel	1145	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	237.304334007568	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	32	True	NA	NA	NA	118266551	118272308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_118266584_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920_118272067_118272168
ENSMUSG00000006392.17_118266552_118272308_3	chr4	+	602	6	NNC	ENSMUSG00000006392.17	novel	1145	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	268.489403887751	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	32	True	NA	NA	NA	118266551	118272308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_118266584_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269887_118272169
ENSMUSG00000006392.17_118268076_118272308_1	chr4	+	1178	7	NIC	ENSMUSG00000006392.17	novel	1145	7	NA	NA	531	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	317.750426173331	2242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	32	True	NA	NA	NA	118268075	118272308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_118268201_118268722_118268771_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ENSMUSG00000006398.16_118290098_118294549_1	chr4	-	1788	10	NNC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	516.884494105708	1982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	False	NA	-11	True	AATAAA	-17	NA	118294549	118290097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_118290330_118290673_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ENSMUSG00000006412.11_171173238_171185738_1	chr1	+	645	4	NNC	ENSMUSG00000006412.11	novel	1735	4	NA	NA	0	200	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_3	941.834144398872	5406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATAGCCTGAACCTTTAT	NA	False	NA	29	True	NA	NA	NA	171173237	171185738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_171173355_171184097_171184187_171184272_171184397_171185423
ENSMUSG00000006412.11_171173238_171185738_2	chr1	+	713	4	FSM	ENSMUSG00000006412.11	ENSMUST00000006579.5	885	4	-60	232	0	200	multi-exon	FALSE	canonical	3	27	junction_3	957.822994550083	5183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATAGCCTGAACCTTTAT	NA	False	NA	29	True	NA	NA	NA	171173237	171185738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185355
ENSMUSG00000006412.11_171173238_171185738_3	chr1	+	651	4	FSM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	0	1084	0	200	multi-exon	FALSE	canonical	3	1860	junction_3	112.860779527503	5547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATAGCCTGAACCTTTAT	NA	False	NA	29	True	NA	NA	NA	171173237	171185738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185417
ENSMUSG00000006418.18_167345366_167357864_1	chr2	+	1916	6	FSM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	357	229	0	-220	multi-exon	FALSE	canonical	3	578	junction_2	31.1088411870323	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCACTGTACCCTCTGG	NA	False	NA	NA	False	NA	NA	NA	167345365	167357864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ENSMUSG00000006418.18_167345366_167358086_1	chr2	+	2138	6	FSM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	357	7	0	0	multi-exon	FALSE	canonical	3	578	junction_2	31.1088411870323	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTAAGCTGCAATGTTTT	NA	False	NA	17	True	AATAAA	-18	NA	167345365	167358086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ENSMUSG00000006418.18_167345366_167358086_2	chr2	+	1052	7	NNC	ENSMUSG00000006418.18	novel	3001	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	219.784490404173	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTAAGCTGCAATGTTTT	NA	False	NA	17	True	AATAAA	-18	NA	167345365	167358086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585_167356701_167357786
ENSMUSG00000006423.16_36091034_36127891_1	chrX	-	1574	7	NNC	ENSMUSG00000006423.16	novel	678	3	NA	NA	0	-3644	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	84.3374504923854	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCTTGCGTTTTACAG	NA	False	NA	NA	False	AATAAA	-15	NA	36127891	36091033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_36091896_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ENSMUSG00000006442.11_148676130_148679076_1	chr4	+	1168	7	FSM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	170	0	170	0	multi-exon	FALSE	canonical	3	3072	junction_6	112.657297440808	729	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCATTTTTGTTCCTA	8886	False	NA	28	True	AATACA	-36	NA	148676129	148679076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743
ENSMUSG00000006456.11_4850950_4861631_1	chr19	-	2781	3	FSM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	31	353	-18	0	multi-exon	FALSE	canonical	3	363	junction_1	19	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	7796	False	NA	0	True	AATAAA	-27	NA	4861631	4850949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4851834_4852578_4854044_4861199
ENSMUSG00000006463.14_4928732_4934538_2	chr19	+	1637	3	FSM	ENSMUSG00000006463.14	ENSMUST00000162720.8	2523	3	0	886	0	711	multi-exon	FALSE	canonical	0	0	junction_1	82.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATTATTGTAAAGAGAAT	NA	False	NA	9	True	AATAAA	-18	NA	4928731	4934538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4929056_4930148_4930427_4933503
ENSMUSG00000006498.17_79690439_79699352_1	chr10	+	1940	13	FSM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	-24	1253	0	94	multi-exon	FALSE	canonical	3	638	junction_7	276.779833782898	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCGCTTTCTGTGCCTT	1561	False	NA	NA	False	GGGGCT	-31	NA	79690438	79699352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79690439_79700195_1	chr10	+	2862	13	NNC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_1	476.714296862737	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1561	False	NA	33	True	ATTAAA	-17	NA	79690438	79700195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79690556_79694553_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79690439_79700195_2	chr10	+	2830	13	NIC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	0	2	intron_retention	FALSE	canonical	3	24	junction_1	471.055751300558	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1561	False	NA	33	True	ATTAAA	-17	NA	79690438	79700195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_79690556_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79690439_79700195_3	chr10	+	2782	12	NNC	ENSMUSG00000006498.17	novel	1765	12	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_8	517.288464371574	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1561	False	NA	33	True	ATTAAA	-17	NA	79690438	79700195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79698249_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79690439_79700195_4	chr10	+	2861	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	178	71	0	2	multi-exon	FALSE	canonical	3	966	junction_8	238.590734232364	2989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1561	False	NA	33	True	ATTAAA	-17	NA	79690438	79700195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79690439_79700195_5	chr10	+	2771	12	NNC	ENSMUSG00000006498.17	novel	1765	12	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_8	517.288464371574	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1561	False	NA	33	True	ATTAAA	-17	NA	79690438	79700195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79698260_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79690439_79700269_1	chr10	+	2924	13	NNC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	0	3	intron_retention	FALSE	canonical	0	0	junction_1	476.714296862737	1606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1561	False	NA	26	True	AATAAA	-16	NA	79690438	79700269	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79690556_79694565_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79690439_79700269_2	chr10	+	2846	12	NNC	ENSMUSG00000006498.17	novel	3169	13	NA	NA	0	3	intron_retention	FALSE	canonical	0	0	junction_1	517.067270269035	1299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1561	False	NA	26	True	AATAAA	-16	NA	79690438	79700269	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79690556_79694565_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79690501_79700195_1	chr10	+	2788	13	NNC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_1	476.714296862737	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1623	False	NA	33	True	ATTAAA	-17	NA	79690500	79700195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79690556_79694565_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79690501_79700195_2	chr10	+	2710	12	NNC	ENSMUSG00000006498.17	novel	3169	13	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_1	517.067270269035	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1623	False	NA	33	True	ATTAAA	-17	NA	79690500	79700195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79690556_79694565_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79690501_79700195_3	chr10	+	2721	13	FSM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	38	410	0	2	multi-exon	FALSE	canonical	3	638	junction_7	276.779833782898	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1623	False	NA	33	True	ATTAAA	-17	NA	79690500	79700195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_79690501_79700269_1	chr10	+	1636	13	NNC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	0	3	intron_retention	FALSE	non_canonical	0	0	junction_12	465.184095875553	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1623	False	NA	26	True	AATAAA	-16	NA	79690500	79700269	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698614_79700047
ENSMUSG00000006498.17_79690501_79700269_2	chr10	+	2794	12	NNC	ENSMUSG00000006498.17	novel	1765	12	NA	NA	0	3	intron_retention	FALSE	canonical	0	0	junction_8	517.288464371574	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1623	False	NA	26	True	AATAAA	-16	NA	79690500	79700269	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79698249_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006517.6_123160340_123170161_1	chr8	-	1751	10	NNC	ENSMUSG00000006517.6	novel	1756	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	74.1486661468568	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	False	NA	-8	True	AATAAA	-17	NA	123170161	123160339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376_123166492_123166920_123166992_123170037
ENSMUSG00000006519.12_123151515_123159647_1	chr8	-	714	6	NNC	ENSMUSG00000006519.12	novel	744	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	323.572928410274	2738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGACAAGAAATTCTCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	123159647	123151514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_123151827_123152924_123153007_123153674_123153759_123153967_123154035_123154393_123154464_123159548
ENSMUSG00000006575.15_102288404_102292580_1	chr11	+	1450	10	ISM	ENSMUSG00000006575.15	ENSMUST00000107102.8	1837	11	4175	0	-286	0	3prime_fragment	FALSE	canonical	3	49	junction_9	60.3884544602589	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGGGGAGACAGAGACAT	3197	False	NA	11	True	NA	NA	NA	102288403	102292580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292214
ENSMUSG00000006589.9_123301374_123303610_1	chr8	-	536	4	NNC	ENSMUSG00000006589.9	novel	560	3	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	665.62518648928	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	False	NA	-5	True	AATAAA	-17	NA	123303610	123301373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_123301767_123301875_123301955_123302140_123302189_123303594
ENSMUSG00000006589.9_123301374_123303610_2	chr8	-	837	5	NNC	ENSMUSG00000006589.9	novel	849	5	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	706.001416429174	10065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	False	NA	-5	True	AATAAA	-17	NA	123303610	123301373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123303361_123303486
ENSMUSG00000006589.9_123301374_123303610_3	chr8	-	945	6	NIC	ENSMUSG00000006589.9	novel	660	6	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	634.519030447472	5528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	False	NA	-5	True	AATAAA	-17	NA	123303610	123301373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_123301767_123301875_123301955_123302140_123302275_123302857_123302971_123303253_123303361_123303491
ENSMUSG00000006589.9_123301374_123303610_4	chr8	-	149	2	NNC	ENSMUSG00000006589.9	novel	560	3	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	False	NA	-5	True	AATAAA	-17	NA	123303610	123301373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_123301474_123303561
ENSMUSG00000006589.9_123301374_123303610_5	chr8	-	1228	5	FSM	ENSMUSG00000006589.9	ENSMUST00000213029.2	929	5	-18	-281	-18	0	multi-exon	FALSE	canonical	3	286	junction_3	493.303152229945	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	False	NA	-5	True	AATAAA	-17	NA	123303610	123301373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123302857_123303361_123303491
ENSMUSG00000006589.9_123301374_123303610_6	chr8	-	963	4	ISM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	19	-2	-18	0	intron_retention	FALSE	canonical	0	0	junction_3	665.62518648928	1676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	False	NA	-5	True	AATAAA	-17	NA	123303610	123301373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253
ENSMUSG00000006589.9_123301374_123303610_7	chr8	-	830	5	NNC	ENSMUSG00000006589.9	novel	849	5	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	617.095414016342	9747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	False	NA	-5	True	AATAAA	-17	NA	123303610	123301373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_123301767_123301875_123301955_123302140_123302269_123303249_123303361_123303491
ENSMUSG00000006589.9_123301374_123303610_8	chr8	-	941	4	NIC	ENSMUSG00000006589.9	novel	849	5	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_2	674.306227828936	3566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	False	NA	-5	True	AATAAA	-17	NA	123303610	123301373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_123301955_123302140_123302275_123303253_123303361_123303491
ENSMUSG00000006589.9_123301374_123303661_1	chr8	-	211	2	NNC	ENSMUSG00000006589.9	novel	560	3	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	False	NA	-5	True	AATAAA	-17	NA	123303661	123301373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_123301471_123303547
ENSMUSG00000006589.9_123301374_123303661_2	chr8	-	748	5	NNC	ENSMUSG00000006589.9	novel	849	5	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	705.252215522929	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	False	NA	-5	True	AATAAA	-17	NA	123303661	123301373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123303361_123303626
ENSMUSG00000006589.9_123301588_123303610_1	chr8	-	618	5	FSM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	19	212	-18	0	multi-exon	FALSE	canonical	0	0	junction_3	617.095414016342	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCAGGAACTGCTTGGTG	NA	False	NA	NA	False	NA	NA	NA	123303610	123301587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123303361_123303491
ENSMUSG00000006599.14_46445538_46473224_1	chr7	+	2794	16	NIC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	187.878920821067	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	4717	False	NA	4	True	AATAAA	-15	NA	46445537	46473224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_46445713_46446820_46446890_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ENSMUSG00000006641.13_31206003_31211967_1	chr5	-	890	7	NIC	ENSMUSG00000006641.13	novel	3218	18	NA	NA	-5699	-5564	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGTCTTGACAGCTCGCG	8592	False	NA	NA	False	NA	NA	NA	31211967	31206002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_31206101_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211658
ENSMUSG00000006641.13_31206003_31211967_2	chr5	-	937	7	NNC	ENSMUSG00000006641.13	novel	3218	18	NA	NA	-5699	-5564	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGTCTTGACAGCTCGCG	8592	False	NA	NA	False	NA	NA	NA	31211967	31206002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_31206101_31206805_31206925_31209545_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
ENSMUSG00000006651.9_30134407_30136461_3	chr7	-	942	5	NNC	ENSMUSG00000006651.9	novel	2343	17	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	210.36218766689	658	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGTGTTTCTGTTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	30136461	30134406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30136207
ENSMUSG00000006651.9_30134407_30139857_1	chr7	-	1338	9	ISM	ENSMUSG00000006651.9	ENSMUST00000208792.2	2472	16	5057	-6	0	0	3prime_fragment	FALSE	canonical	3	360	junction_6	42.8711732986164	543	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGTGTTTCTGTTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	30139857	30134406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30136211_30136320_30137602_30137703_30139359_30139489_30139568
ENSMUSG00000006673.15_108394302_108437364_1	chr9	+	3232	10	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	173.205152034684	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1163	False	NA	66	True	NA	NA	NA	108394301	108437364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_108394452_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ENSMUSG00000006673.15_108394302_108437364_3	chr9	+	3220	10	FSM	ENSMUSG00000006673.15	ENSMUST00000112155.9	3040	10	-7	-173	0	2	multi-exon	FALSE	canonical	3	392	junction_1	89.886485340754	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1163	False	NA	66	True	NA	NA	NA	108394301	108437364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ENSMUSG00000006673.15_108394822_108437364_1	chr9	+	3436	10	Fusion	ENSMUSG00000103970.2_ENSMUSG00000006673.15	novel	756	3	NA	NA	0	2	multi-exon	FALSE	canonical	3	32	junction_1	198.101046669012	675	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1683	False	NA	66	True	NA	NA	NA	108394821	108437364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr9_+_108395176_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ENSMUSG00000006699.18_137048135_137085010_1	chr4	-	959	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	21	1128	0	938	multi-exon	FALSE	canonical	3	1589	junction_5	116.347067002138	2751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGTTGTTTTTTTGTTT	NA	False	NA	1	True	TTTAAA	-25	NA	137085010	137048134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ENSMUSG00000006699.18_137048313_137085010_1	chr4	-	781	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	21	1306	0	760	multi-exon	FALSE	canonical	3	1589	junction_5	116.347067002138	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACAAACGCCCTGCAC	NA	False	NA	-13	True	NA	NA	NA	137085010	137048312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ENSMUSG00000006699.18_137049747_137085010_1	chr4	-	774	6	FSM	ENSMUSG00000006699.18	ENSMUST00000030417.10	1448	6	0	674	0	-674	multi-exon	FALSE	canonical	3	65	junction_1	708.103664727136	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCGTCTTCTTACTC	NA	False	NA	-20	True	AATAAA	-17	NA	137085010	137049746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_137049931_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ENSMUSG00000006705.14_31783781_31825274_1	chr17	+	2786	11	FSM	ENSMUSG00000006705.14	ENSMUST00000097352.11	4252	11	73	1393	0	769	multi-exon	FALSE	canonical	3	101	junction_5	23.0781281736626	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTCTCTTCAGCCATTG	NA	False	NA	NA	False	NA	NA	NA	31783780	31825274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ENSMUSG00000006715.12_24935828_24945423_1	chr13	-	933	7	FSM	ENSMUSG00000006715.12	ENSMUST00000175689.8	723	7	36	-246	0	0	multi-exon	FALSE	canonical	3	19	junction_6	596.377513735125	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGTGGAGAATTAAGTGT	NA	False	NA	-8	True	AATAAA	-26	NA	24945423	24935827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945342
ENSMUSG00000006715.12_24935828_24945921_1	chr13	-	974	7	NNC	ENSMUSG00000006715.12	novel	963	7	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	599.554209392278	6414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGTGGAGAATTAAGTGT	NA	False	NA	-8	True	AATAAA	-26	NA	24945921	24935827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_24936206_24937326_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945795
ENSMUSG00000006715.12_24935828_24945921_2	chr13	-	969	7	NNC	ENSMUSG00000006715.12	novel	963	7	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	595.861397940457	6271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGTGGAGAATTAAGTGT	NA	False	NA	-8	True	AATAAA	-26	NA	24945921	24935827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_24936214_24937339_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945795
ENSMUSG00000006715.12_24935828_24945921_4	chr13	-	973	7	NIC	ENSMUSG00000006715.12	novel	963	7	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	74	junction_5	556.354727968886	6519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGTGGAGAATTAAGTGT	NA	False	NA	-8	True	AATAAA	-26	NA	24945921	24935827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941652_24944142_24944201_24945795
ENSMUSG00000006720.17_22129425_22144655_1	chr13	+	2761	6	FSM	ENSMUSG00000006720.17	ENSMUST00000102978.8	3198	6	143	294	118	0	multi-exon	FALSE	canonical	3	46	junction_1	13.42236938845	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTTAAGTTTCTTCTG	NA	False	NA	12	True	ATTAAA	-16	NA	22129424	22144655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
ENSMUSG00000006720.17_22129532_22144657_1	chr13	+	2656	6	FSM	ENSMUSG00000006720.17	ENSMUST00000102978.8	3198	6	250	292	225	2	multi-exon	FALSE	canonical	3	46	junction_1	13.42236938845	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTAAGTTTCTTCTGTA	NA	False	NA	14	True	ATTAAA	-18	NA	22129531	22144657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
ENSMUSG00000006728.13_126899485_126903166_1	chr10	+	1114	7	NIC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	131	junction_1	1988.62057858093	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTAATGTTTTTTC	NA	False	NA	29	True	AAAACA	-27	NA	126899484	126903166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_126899629_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ENSMUSG00000006728.13_126899485_126903166_2	chr10	+	1348	8	FSM	ENSMUSG00000006728.13	ENSMUST00000006911.12	2053	8	82	623	0	0	multi-exon	FALSE	canonical	3	4641	junction_3	430.829906300927	17991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTAATGTTTTTTC	NA	False	NA	29	True	AAAACA	-27	NA	126899484	126903166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ENSMUSG00000006728.13_126899485_126903166_3	chr10	+	1425	9	NNC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2329.35467189949	1895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTAATGTTTTTTC	NA	False	NA	29	True	AAAACA	-27	NA	126899484	126903166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902456_126902534_126902797
ENSMUSG00000006732.15_126877826_126881359_1	chr10	+	891	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	25	875	0	-125	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	126877825	126881359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
ENSMUSG00000006732.15_126877826_126881820_1	chr10	+	1352	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	25	414	0	52	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTGTGTGTGGCTCAGG	NA	False	NA	3	True	NA	NA	NA	126877825	126881820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
ENSMUSG00000006732.15_126877826_126881820_2	chr10	+	451	4	NNC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	0	52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	193.032524605455	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTGTGTGTGGCTCAGG	NA	False	NA	3	True	NA	NA	NA	126877825	126881820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_126877940_126878928_126879093_126880335_126880432_126881743
ENSMUSG00000006736.10_126899403_126903166_1	chr10	-	1400	7	NNC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	2103	3746	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACACGTGATCTTCACCC	2806	False	NA	NA	False	NA	NA	NA	126903166	126899402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901155_126901969_126902106_126902797
ENSMUSG00000006736.10_126899403_126903166_2	chr10	-	1423	8	NNC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	2103	3746	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	10281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACACGTGATCTTCACCC	2806	False	NA	NA	False	NA	NA	NA	126903166	126899402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901127_126901821_126901873_126901969_126902106_126902797
ENSMUSG00000006736.10_126899485_126903166_1	chr10	-	1366	8	NIC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	2103	3664	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	12021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCACCCCCACCCTCACC	2806	False	NA	NA	False	NA	NA	NA	126903166	126899484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_126899629_126900070_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ENSMUSG00000006736.10_126899485_126903166_2	chr10	-	1802	6	NIC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	2103	3664	intron_retention	FALSE	non_canonical	0	0	junction_1	0	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCACCCCCACCCTCACC	2806	False	NA	NA	False	NA	NA	NA	126903166	126899484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_126899629_126900453_126900590_126900703_126900872_126901023_126901873_126901969_126902106_126902797
ENSMUSG00000006736.10_126899485_126903166_3	chr10	-	1367	8	NNC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	2103	3664	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	7768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCACCCCCACCCTCACC	2806	False	NA	NA	False	NA	NA	NA	126903166	126899484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901950_126902106_126902797
ENSMUSG00000006736.10_126899485_126903166_4	chr10	-	1330	7	NNC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	2103	3664	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCACCCCCACCCTCACC	2806	False	NA	NA	False	NA	NA	NA	126903166	126899484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901936_126902106_126902797
ENSMUSG00000006736.10_126899485_126903166_5	chr10	-	1343	8	NNC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	2103	3664	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCACCCCCACCCTCACC	2806	False	NA	NA	False	NA	NA	NA	126903166	126899484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_126899629_126900088_126900318_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ENSMUSG00000006736.10_126899485_126903166_6	chr10	-	1339	7	NNC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	2103	3664	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCACCCCCACCCTCACC	2806	False	NA	NA	False	NA	NA	NA	126903166	126899484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901176_126901969_126902106_126902797
ENSMUSG00000006736.10_126899485_126903166_7	chr10	-	1328	7	NNC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	2103	3664	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCACCCCCACCCTCACC	2806	False	NA	NA	False	NA	NA	NA	126903166	126899484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901165_126901969_126902106_126902797
ENSMUSG00000006736.10_126903149_126906133_1	chr10	-	1562	6	NNC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	233.073893862011	1551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTTGTTTTCCTGTA	NA	False	NA	0	True	AATAAA	-15	NA	126906133	126903148	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_126904060_126904137_126904252_126904348_126904481_126904770_126904858_126905214_126905383_126905983
ENSMUSG00000006736.10_126903691_126906133_1	chr10	-	1014	6	FSM	ENSMUSG00000006736.10	ENSMUST00000060991.6	1556	6	0	542	0	419	multi-exon	FALSE	canonical	3	545	junction_1	41.1698919114442	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCCTTGCCATCTT	NA	False	NA	NA	False	NA	NA	NA	126906133	126903690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905983
ENSMUSG00000006763.15_46338728_46360085_1	chr7	-	1594	13	NNC	ENSMUSG00000006763.15	novel	1849	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	181.075241420675	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCATCGGGATGATGGT	NA	False	NA	-12	True	AATAAA	-24	NA	46360085	46338727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351606_46351713_46351825_46351917_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ENSMUSG00000006763.15_46338728_46360085_2	chr7	-	1513	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	19	3196	0	0	multi-exon	FALSE	canonical	3	340	junction_6	40.4362573576105	1798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCATCGGGATGATGGT	NA	False	NA	-12	True	AATAAA	-24	NA	46360085	46338727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ENSMUSG00000006763.15_46338728_46360085_3	chr7	-	1508	12	NIC	ENSMUSG00000006763.15	novel	4728	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	12	junction_4	121.595658360944	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCATCGGGATGATGGT	NA	False	NA	-12	True	AATAAA	-24	NA	46360085	46338727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348972_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ENSMUSG00000006782.17_100473644_100510446_1	chr11	+	1782	14	Fusion	ENSMUSG00000006782.17_ENSMUSG00000017837.13	novel	1727	4	NA	NA	6927	-5258	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5583	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCCGGGTGGGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	100473643	100510446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr11_+_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUSG00000006800.15_165915834_165997583_1	chr2	-	3755	21	FSM	ENSMUSG00000006800.15	ENSMUST00000109249.9	4580	21	0	825	0	0	multi-exon	FALSE	canonical	0	0	junction_20	203.951336107416	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTTGGGACTTTTTTGC	NA	False	NA	-10	True	NA	NA	NA	165997583	165915833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
ENSMUSG00000006818.6_13225733_13234241_1	chr17	+	1153	6	NIC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	0	-262	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	1288.2053563	6390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGTGTGAATTGCTCT	NA	False	NA	46	True	ATTAAA	-34	NA	13225732	13234241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_13225849_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ENSMUSG00000006818.6_13226883_13234241_1	chr17	+	902	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	179	4780	0	-262	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	5875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGTGTGAATTGCTCT	NA	False	NA	46	True	ATTAAA	-34	NA	13226882	13234241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ENSMUSG00000006941.6_120321699_120324396_1	chr9	+	803	4	NNC	ENSMUSG00000006941.6	novel	1035	4	NA	NA	142	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	208.69328903654	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCAATGCACTTTGTTT	NA	False	NA	34	True	AATAAA	-36	NA	120321698	120324396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_120321818_120323172_120323337_120323600_120323703_120323978
ENSMUSG00000006941.6_120321699_120324396_2	chr9	+	893	4	FSM	ENSMUSG00000006941.6	ENSMUST00000007139.6	1035	4	142	0	142	0	multi-exon	FALSE	canonical	3	407	junction_2	26.9608770051883	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCAATGCACTTTGTTT	NA	False	NA	34	True	AATAAA	-36	NA	120321698	120324396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_120321908_120323172_120323337_120323600_120323703_120323978
ENSMUSG00000006998.17_20470454_20471504_1	chr16	+	367	3	ISM	ENSMUSG00000006998.17	ENSMUST00000232629.2	441	4	0	2234	0	0	5prime_fragment	FALSE	canonical	3	3173	junction_2	206.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTAATTCAGAATATGGC	NA	False	NA	NA	False	NA	NA	NA	20470453	20471504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_20470602_20470993_20471051_20471342
ENSMUSG00000006998.17_20470454_20482164_1	chr16	+	2903	21	NNC	ENSMUSG00000006998.17	novel	3001	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	682.783367914011	3582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470453	20482164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_20470602_20470999_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ENSMUSG00000006998.17_20470454_20482164_2	chr16	+	2904	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	95	junction_11	680.83054242594	3298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470453	20482164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476728_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ENSMUSG00000006998.17_20470454_20482164_3	chr16	+	2903	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	700.658138823778	3132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470453	20482164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478434_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ENSMUSG00000007029.17_35220027_35235302_1	chr17	+	4077	30	FSM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	64	-4	0	4	multi-exon	FALSE	canonical	0	0	junction_12	417.564149877336	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9538	False	NA	14	True	AATAAA	-15	NA	35220026	35235302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ENSMUSG00000007029.17_35234875_35235302_1	chr17	+	161	2	ISM	ENSMUSG00000007029.17	ENSMUST00000172637.8	3731	28	13185	-4	934	4	3prime_fragment	FALSE	canonical	3	1811	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	1865	False	NA	14	True	AATAAA	-15	NA	35234874	35235302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_35234896_35235162
ENSMUSG00000007030.9_35244935_35246906_1	chr17	+	536	4	NIC	ENSMUSG00000007030.9	novel	4313	17	NA	NA	9321	1189	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCCGGGGCTGGTCCCTC	1718	False	NA	NA	False	NA	NA	NA	35244934	35246906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_35245124_35245313_35245434_35245669_35245763_35246772
ENSMUSG00000007038.6_35150229_35154297_1	chr17	+	1874	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	0	600	0	-600	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTTGTGGAGTCTGTGGT	7923	False	NA	13	True	NA	NA	NA	35150228	35154297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
ENSMUSG00000007038.6_35150290_35154297_1	chr17	+	1813	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	61	600	0	-600	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTTGTGGAGTCTGTGGT	7984	False	NA	13	True	NA	NA	NA	35150289	35154297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
ENSMUSG00000007038.6_35150290_35154929_1	chr17	+	2445	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	61	-32	0	0	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGATTCGGGCTGCGTTC	7984	False	NA	NA	False	NA	NA	NA	35150289	35154929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
ENSMUSG00000007039.13_35278077_35281071_1	chr17	+	1275	7	NNC	ENSMUSG00000007039.13	novel	1254	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	176.140726567014	3406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	False	NA	17	True	AATAAA	-23	NA	35278076	35281071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_35278249_35279083_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
ENSMUSG00000007039.13_35278077_35281071_2	chr17	+	1280	7	FSM	ENSMUSG00000007039.13	ENSMUST00000007255.13	1342	7	66	-4	0	0	multi-exon	FALSE	canonical	3	393	junction_1	36.6488593122472	3468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	False	NA	17	True	AATAAA	-23	NA	35278076	35281071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
ENSMUSG00000007039.13_35278792_35281071_1	chr17	+	1257	7	NIC	ENSMUSG00000007039.13	novel	682	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	154.377693408802	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	False	NA	17	True	AATAAA	-23	NA	35278791	35281071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_35278941_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
ENSMUSG00000007041.10_35269179_35277725_1	chr17	+	1047	5	NIC	ENSMUSG00000007041.10	novel	1466	6	NA	NA	237	0	combination_of_known_splicesites	TRUE	canonical	1	4	junction_4	490.225649573745	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGCTTAAAGTGTAGTGG	1913	False	NA	NA	False	AATAAA	-41	NA	35269178	35277725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35277305
ENSMUSG00000007041.10_35269231_35277725_2	chr17	+	1171	6	NNC	ENSMUSG00000007041.10	novel	1466	6	NA	NA	289	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	464.054910544	4706	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGCTTAAAGTGTAGTGG	1965	False	NA	NA	False	AATAAA	-41	NA	35269230	35277725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274208_35274385_35277305
ENSMUSG00000007041.10_35269408_35277725_1	chr17	+	994	6	NNC	ENSMUSG00000007041.10	novel	1466	6	NA	NA	466	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	464.054910544	3163	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGCTTAAAGTGTAGTGG	2142	False	NA	NA	False	AATAAA	-41	NA	35269407	35277725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274208_35274385_35277305
ENSMUSG00000007041.10_35269408_35277725_3	chr17	+	818	5	NIC	ENSMUSG00000007041.10	novel	1466	6	NA	NA	466	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	490.225649573745	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGCTTAAAGTGTAGTGG	2142	False	NA	NA	False	AATAAA	-41	NA	35269407	35277725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35277305
ENSMUSG00000007041.10_35270428_35277725_1	chr17	+	1012	6	NNC	ENSMUSG00000007041.10	novel	843	4	NA	NA	-998	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	467.428026545264	2890	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGCTTAAAGTGTAGTGG	3162	False	NA	NA	False	AATAAA	-41	NA	35270427	35277725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_35270495_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274385_35277305
ENSMUSG00000007050.18_35201097_35204867_1	chr17	+	667	5	FSM	ENSMUSG00000007050.18	ENSMUST00000174326.8	368	5	0	-299	0	0	multi-exon	FALSE	canonical	2	11	junction_1	710.43520992417	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	235	False	NA	26	True	AATAAA	-20	NA	35201096	35204867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35201130_35201595_35201664_35204084_35204116_35204224_35204285_35204392
ENSMUSG00000007050.18_35201135_35204867_2	chr17	+	1095	4	FSM	ENSMUSG00000007050.18	ENSMUST00000174860.8	691	4	-10	-394	0	0	multi-exon	FALSE	canonical	3	1479	junction_1	117.83132954449	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	273	False	NA	26	True	AATAAA	-20	NA	35201134	35204867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35201664_35204084_35204116_35204224_35204285_35204392
ENSMUSG00000007097.15_172102110_172125631_1	chr1	-	3393	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	0	2834	0	0	multi-exon	FALSE	canonical	3	93	junction_19	23.4067518690196	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTCCACAGGTCCCGC	NA	False	NA	-14	True	AATAAA	-18	NA	172125631	172102109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ENSMUSG00000007216.7_48578997_48598480_1	chr6	+	2462	3	FSM	ENSMUSG00000007216.7	ENSMUST00000204095.3	4143	3	0	1681	0	-1681	multi-exon	FALSE	canonical	3	52	junction_2	4.5	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGTGTCACTGTTCTT	NA	False	NA	6	True	AATGAA	-14	NA	48578996	48598480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_48579055_48590111_48590194_48596158
ENSMUSG00000007338.11_6103927_6107781_5	chr19	-	1449	4	NNC	ENSMUSG00000007338.11	novel	1764	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	428.509820968746	3238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACGGTGTTCAGAACCT	NA	False	NA	-15	True	ATTAAA	-15	NA	6107781	6103926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6105013_6105105_6105231_6106958_6107104_6107688
ENSMUSG00000007338.11_6104703_6107781_2	chr19	-	670	4	NNC	ENSMUSG00000007338.11	novel	1764	4	NA	NA	-6	258	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	431.672972926909	1602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCATGTGTCCACTTGAG	NA	False	NA	-8	True	CATAAA	-18	NA	6107781	6104702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6105004_6105105_6105231_6106958_6107110_6107688
ENSMUSG00000007338.11_6104703_6107781_3	chr19	-	673	4	NNC	ENSMUSG00000007338.11	novel	1764	4	NA	NA	-6	258	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	428.509820968746	1776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCATGTGTCCACTTGAG	NA	False	NA	-8	True	CATAAA	-18	NA	6107781	6104702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6105013_6105105_6105231_6106958_6107104_6107688
ENSMUSG00000007379.16_103009976_103044475_1	chr3	+	1319	5	NIC	ENSMUSG00000007379.16	novel	3060	12	NA	NA	0	-20113	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	28.3460755661167	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTCAGCGGAAGACTA	NA	False	NA	NA	False	NA	NA	NA	103009975	103044475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458
ENSMUSG00000007379.16_103009976_103077054_1	chr3	+	4963	19	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	23.362415738442	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103009975	103077054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ENSMUSG00000007458.15_122285958_122293449_1	chr6	+	1046	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	279	1190	0	-299	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATACTCAGCCAGACT	2943	False	NA	NA	False	NA	NA	NA	122285957	122293449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
ENSMUSG00000007458.15_122285958_122293749_1	chr6	+	1346	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	279	890	0	1	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	2318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGTTGCCTCAAGTTG	2943	False	NA	12	True	ATTAAA	-19	NA	122285957	122293749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
ENSMUSG00000007458.15_122285958_122293749_2	chr6	+	417	3	NNC	ENSMUSG00000007458.15	novel	2976	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	688.5	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGTTGCCTCAAGTTG	2943	False	NA	12	True	ATTAAA	-19	NA	122285957	122293749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_122286126_122289192_122289373_122293680
ENSMUSG00000007458.15_122285958_122294639_1	chr6	+	2236	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	279	0	0	0	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	5422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTTGTCGTTTGTGCT	2943	False	NA	6	True	ATTAAA	-15	NA	122285957	122294639	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
ENSMUSG00000007476.19_30127734_30147203_1	chr2	+	2217	3	ISM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	0	6599	0	-6594	5prime_fragment	FALSE	canonical	3	81	junction_1	11	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCGAGAAAATCCCCAC	NA	False	NA	NA	False	NA	NA	NA	30127733	30147203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_30127818_30130580_30130690_30145179
ENSMUSG00000007564.16_21165749_21186167_2	chr17	+	2215	15	NNC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	345.685690966195	4505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTCTCTAGTCTTAGT	NA	False	NA	28	True	AATAAA	-13	NA	21165748	21186167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_21165846_21171604_21171696_21174876_21174970_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ENSMUSG00000007564.16_21165749_21186167_3	chr17	+	2216	15	NNC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	346.338603928913	2701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTCTCTAGTCTTAGT	NA	False	NA	28	True	AATAAA	-13	NA	21165748	21186167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179090_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ENSMUSG00000007564.16_21165749_21186167_4	chr17	+	2211	15	NNC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	345.685690966195	2530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTCTCTAGTCTTAGT	NA	False	NA	28	True	AATAAA	-13	NA	21165748	21186167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_21165846_21171604_21171696_21174876_21174978_21176061_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ENSMUSG00000007564.16_21165749_21186167_6	chr17	+	2228	15	NNC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	343.702447545809	5366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTCTCTAGTCTTAGT	NA	False	NA	28	True	AATAAA	-13	NA	21165748	21186167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182984_21185500_21185593_21185716
ENSMUSG00000007564.16_21165749_21186167_7	chr17	+	2217	15	NNC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	346.318686549053	3491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTCTCTAGTCTTAGT	NA	False	NA	28	True	AATAAA	-13	NA	21165748	21186167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178987_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ENSMUSG00000007564.16_21165749_21186167_8	chr17	+	2217	15	NNC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	346.379024439166	5068	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTCTCTAGTCTTAGT	NA	False	NA	28	True	AATAAA	-13	NA	21165748	21186167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_21165840_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ENSMUSG00000007589.10_55909715_55916201_1	chr14	-	1508	10	NNC	ENSMUSG00000007589.10	novel	2956	9	NA	NA	1331	2431	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATTCTAGCTTCGGGC	NA	False	NA	NA	False	NA	NA	NA	55916201	55909714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915333_55915488_55915680
ENSMUSG00000007589.10_55916559_55919265_1	chr14	-	1708	9	FSM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	12	1236	-4	1105	multi-exon	FALSE	canonical	3	280	junction_6	40.8281459290034	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTCATTCCTCCGA	NA	False	NA	-25	True	AATAAA	-15	NA	55919265	55916558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ENSMUSG00000007589.10_55916559_55919265_2	chr14	-	1862	8	FSM	ENSMUSG00000007589.10	ENSMUST00000228264.2	3130	8	-22	1290	-4	1105	multi-exon	FALSE	canonical	3	280	junction_5	42.7532073030068	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTCATTCCTCCGA	NA	False	NA	-25	True	AATAAA	-15	NA	55919265	55916558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ENSMUSG00000007603.10_57071778_57077093_1	chr17	+	2277	13	FSM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	0	-252	0	0	multi-exon	FALSE	canonical	3	220	junction_6	33.8230690505755	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCTCTCCTTGTGA	9244	False	NA	12	True	NA	NA	NA	57071777	57077093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ENSMUSG00000007610.16_71941372_71945920_1	chr8	+	2051	9	FSM	ENSMUSG00000007610.16	ENSMUST00000007754.13	2800	9	625	124	0	-124	multi-exon	FALSE	canonical	0	0	junction_4	23.9892554073694	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTAGTAGCATGTG	NA	False	NA	15	True	ATTAAA	-17	NA	71941371	71945920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944720_71945000_71945182
ENSMUSG00000007610.16_71941372_71945920_2	chr8	+	1978	8	FSM	ENSMUSG00000007610.16	ENSMUST00000095259.10	2109	8	7	124	0	-124	multi-exon	FALSE	canonical	0	0	junction_4	25.5774135055258	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTAGTAGCATGTG	NA	False	NA	15	True	ATTAAA	-17	NA	71941371	71945920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943709_71943854_71944068_71944235_71944720_71945000_71945182
ENSMUSG00000007646.14_87269417_87295332_1	chr11	-	1798	10	NNC	ENSMUSG00000007646.14	novel	2061	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	45.5338701774112	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAATAGAAATAAAA	NA	False	NA	-38	True	NA	NA	NA	87295332	87269416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_87270011_87270193_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
ENSMUSG00000007646.14_87269417_87295332_2	chr11	-	1853	7	NIC	ENSMUSG00000007646.14	novel	2061	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	54.6595523826043	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAATAGAAATAAAA	NA	False	NA	-38	True	NA	NA	NA	87295332	87269416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_87270314_87271657_87271719_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
ENSMUSG00000007646.14_87269417_87295332_3	chr11	-	1981	9	FSM	ENSMUSG00000007646.14	ENSMUST00000067692.13	3944	9	17	1946	0	0	multi-exon	FALSE	canonical	3	130	junction_1	12.5940213990607	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAATAGAAATAAAA	NA	False	NA	-38	True	NA	NA	NA	87295332	87269416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
ENSMUSG00000007646.14_87269417_87295332_4	chr11	-	1974	9	NNC	ENSMUSG00000007646.14	novel	2061	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	49.4202324458313	715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAATAGAAATAAAA	NA	False	NA	-38	True	NA	NA	NA	87295332	87269416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_87270314_87271657_87271719_87279444_87279499_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
ENSMUSG00000007646.14_87293195_87295332_1	chr11	-	691	2	ISM	ENSMUSG00000007646.14	ENSMUST00000129400.2	938	8	-83	22985	0	-22985	5prime_fragment	FALSE	canonical	3	159	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTAATTGGCTTCTGAG	NA	False	NA	NA	False	ACTAAA	-12	NA	87295332	87293194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_87293683_87295129
ENSMUSG00000007656.14_74944959_74964105_1	chr9	+	655	6	NNC	ENSMUSG00000007656.14	novel	1047	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	2395.3532015133	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	27	True	ATTAAA	-14	NA	74944958	74964105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_74945002_74945188_74945244_74950220_74950376_74950490_74950581_74959514_74959638_74963916
ENSMUSG00000007656.14_74944959_74964105_2	chr9	+	400	4	NNC	ENSMUSG00000007656.14	novel	3944	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	44	junction_2	2373.77144832625	2738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	27	True	ATTAAA	-14	NA	74944958	74964105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_74945002_74945188_74945244_74959524_74959638_74963916
ENSMUSG00000007656.14_74944959_74964105_3	chr9	+	404	4	NNC	ENSMUSG00000007656.14	novel	3944	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2392.89146338808	1708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	27	True	ATTAAA	-14	NA	74944958	74964105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_74945002_74945188_74945248_74959524_74959638_74963916
ENSMUSG00000007656.14_74944959_74964105_4	chr9	+	346	4	NNC	ENSMUSG00000007656.14	novel	3944	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	2461.20390595064	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	27	True	ATTAAA	-14	NA	74944958	74964105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_74945002_74945188_74945244_74959514_74959574_74963916
ENSMUSG00000007656.14_74944959_74964105_5	chr9	+	287	3	NIC	ENSMUSG00000007656.14	novel	3944	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_2	1773.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	27	True	ATTAAA	-14	NA	74944958	74964105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_74945002_74945188_74945244_74963916
ENSMUSG00000007656.14_74944959_74964105_6	chr9	+	398	4	NNC	ENSMUSG00000007656.14	novel	3944	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2392.89146338808	641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	27	True	ATTAAA	-14	NA	74944958	74964105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_74945002_74945188_74945248_74959530_74959638_74963916
ENSMUSG00000007659.19_152622588_152672562_1	chr2	-	2566	3	NIC	ENSMUSG00000007659.19	novel	2568	3	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	150.5	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCCTTGGCTCTGCGC	NA	False	NA	-5	True	AATAAA	-22	NA	152672562	152622587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_152624203_152671346_152672041_152672305
ENSMUSG00000007721.7_71320871_71322720_1	chr8	-	872	4	NNC	ENSMUSG00000007721.7	novel	1356	5	NA	NA	3307	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	278.90619689542	1732	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCATGTCTGTATGTGTG	NA	False	NA	-5	True	AATAAA	-18	NA	71322720	71320870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_71321290_71321380_71321496_71321576_71321743_71322548
ENSMUSG00000007721.7_71320871_71326127_1	chr8	-	898	5	NNC	ENSMUSG00000007721.7	novel	1356	5	NA	NA	-100	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	242.191427387511	1770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCATGTCTGTATGTGTG	NA	False	NA	-5	True	AATAAA	-18	NA	71326127	71320870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_71321290_71321380_71321496_71321576_71321746_71322548_71322719_71326102
ENSMUSG00000007721.7_71320871_71326127_2	chr8	-	904	5	FSM	ENSMUSG00000007721.7	ENSMUST00000007865.7	1356	5	452	0	-100	0	multi-exon	FALSE	canonical	3	353	junction_4	97.9030132324843	1777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCATGTCTGTATGTGTG	NA	False	NA	-5	True	AATAAA	-18	NA	71326127	71320870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71321290_71321380_71321496_71321576_71321752_71322548_71322719_71326102
ENSMUSG00000007739.11_22940519_22953337_1	chr11	+	2041	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	0	443	0	186	multi-exon	FALSE	canonical	3	4673	junction_2	338.771431558561	15834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	20	True	ATTAAA	-20	NA	22940518	22953337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ENSMUSG00000007739.11_22940626_22953337_1	chr11	+	1934	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	107	443	0	186	multi-exon	FALSE	canonical	3	4673	junction_2	338.771431558561	15825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	20	True	ATTAAA	-20	NA	22940625	22953337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ENSMUSG00000007777.10_51576213_51579480_1	chr11	-	818	2	NNC	ENSMUSG00000007777.10	novel	813	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATGTGTATGAATGCT	5184	False	NA	-12	True	ATTAAA	-14	NA	51579480	51576212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_51576920_51579369
ENSMUSG00000007777.10_51576213_51579924_1	chr11	-	823	2	NNC	ENSMUSG00000007777.10	novel	813	2	NA	NA	-223	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	941	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATGTGTATGAATGCT	4740	False	NA	-12	True	ATTAAA	-14	NA	51579924	51576212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_51576920_51579808
ENSMUSG00000007777.10_51576389_51579480_1	chr11	-	637	2	FSM	ENSMUSG00000007777.10	ENSMUST00000007921.9	813	2	0	176	0	-176	multi-exon	FALSE	canonical	3	574	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTCAGCTTACCTG	5184	False	NA	NA	False	GATAAA	-17	NA	51579480	51576388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_51576920_51579374
ENSMUSG00000007812.17_145168539_145174658_1	chr5	+	1191	4	FSM	ENSMUSG00000007812.17	ENSMUST00000085661.9	597	4	-28	-566	0	0	multi-exon	FALSE	canonical	3	16	junction_2	194.635271440941	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTACTTTTTGTAG	1305	False	NA	NA	False	AATACA	-16	NA	145168538	145174658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145168642_145170250_145170413_145172546_145172674_145173859
ENSMUSG00000007812.17_145168539_145174658_2	chr5	+	1064	3	FSM	ENSMUSG00000007812.17	ENSMUST00000199003.5	601	3	-27	-436	0	0	multi-exon	FALSE	canonical	3	21	junction_2	213	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTACTTTTTGTAG	1305	False	NA	NA	False	AATACA	-16	NA	145168538	145174658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145168642_145170250_145170413_145173859
ENSMUSG00000007812.17_145168539_145182625_1	chr5	+	2611	4	FSM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	6	1487	0	-1486	multi-exon	FALSE	canonical	3	281	junction_2	68.241401574769	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCTTATTCACAGTTT	1305	False	NA	5	True	ATTAAA	-20	NA	145168538	145182625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145168642_145170250_145170413_145179729_145179835_145180384
ENSMUSG00000007815.14_108183638_108214611_1	chr9	+	1365	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	310	522	0	-522	multi-exon	FALSE	canonical	3	1457	junction_4	47.4535562418666	5898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATGTAGTATTTTTTGT	NA	False	NA	16	True	AATAAA	-16	NA	108183637	108214611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
ENSMUSG00000007815.14_108183638_108214777_1	chr9	+	1531	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	310	356	0	-356	multi-exon	FALSE	canonical	3	1457	junction_4	47.4535562418666	6689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAATTCCCATTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	108183637	108214777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
ENSMUSG00000007833.16_44791259_44803859_1	chr7	-	2469	17	FSM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	138	930	0	0	multi-exon	TRUE	canonical	3	349	junction_15	41.3256881370413	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9471	False	NA	-8	True	AATAAA	-20	NA	44803859	44791258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ENSMUSG00000007833.16_44791259_44803960_1	chr7	-	2570	17	FSM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	37	930	-10	0	multi-exon	FALSE	canonical	3	349	junction_15	41.3256881370413	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9370	False	NA	-8	True	AATAAA	-20	NA	44803960	44791258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ENSMUSG00000007833.16_44803738_44809483_1	chr7	-	1073	10	NIC	ENSMUSG00000007833.16	novel	666	5	NA	NA	-5475	-5143	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCTTCTCGGAAGCCCC	7477	False	NA	NA	False	NA	NA	NA	44809483	44803737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_44803845_44805716_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ENSMUSG00000007837.12_44703008_44711076_1	chr7	-	1142	6	FSM	ENSMUSG00000007837.12	ENSMUST00000209920.2	876	6	53	-319	0	0	multi-exon	FALSE	canonical	3	12	junction_4	10.7962956610126	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTTCTGGGCGCATT	NA	False	NA	-24	True	AATAAA	-44	NA	44711076	44703007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44710164_44710317_44711011
ENSMUSG00000007837.12_44703008_44711846_1	chr7	-	1368	8	FSM	ENSMUSG00000007837.12	ENSMUST00000210690.2	1623	8	255	0	-18	0	multi-exon	FALSE	canonical	3	9	junction_7	11.5121940673747	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTTCTGGGCGCATT	NA	False	NA	-24	True	AATAAA	-44	NA	44711846	44703007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44709628_44709811_44710164_44710317_44711011_44711076_44711801
ENSMUSG00000007837.12_44711920_44726840_1	chr7	-	980	9	NIC	ENSMUSG00000007837.12	novel	1623	8	NA	NA	-14739	-5691	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGTCCCGAACCGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	44726840	44711919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ENSMUSG00000007837.12_44711920_44727634_1	chr7	-	1774	9	NIC	ENSMUSG00000007837.12	novel	1623	8	NA	NA	-15533	-5691	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGTCCCGAACCGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	44727634	44711919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ENSMUSG00000007850.17_50268592_50276750_1	chr11	+	1575	14	FSM	ENSMUSG00000007850.17	ENSMUST00000069304.14	2225	14	46	604	0	0	multi-exon	FALSE	canonical	3	130	junction_1	115.462537790991	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATTTTTTAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	50268591	50276750	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007850.17_50268592_50277148_1	chr11	+	1973	14	FSM	ENSMUSG00000007850.17	ENSMUST00000069304.14	2225	14	46	206	0	0	multi-exon	FALSE	canonical	3	130	junction_1	115.462537790991	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACGTGAGTTTAAAGCTC	NA	False	NA	NA	False	NA	NA	NA	50268591	50277148	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007850.17_50268592_50277355_1	chr11	+	2041	13	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_4	143.551457092338	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268591	50277355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007850.17_50268592_50277355_2	chr11	+	2236	14	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	133.201631207028	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268591	50277355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_50268686_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007850.17_50268592_50277355_3	chr11	+	2212	14	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	136.035411331369	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268591	50277355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_50268630_50269085_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007850.17_50268592_50277355_4	chr11	+	2159	14	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_7	143.862401385992	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268591	50277355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273775_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007850.17_50268592_50277355_5	chr11	+	2150	14	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_11	142.282700508197	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268591	50277355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274718_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007867.10_86205018_86209233_1	chr12	+	602	5	NNC	ENSMUSG00000007867.10	novel	773	8	NA	NA	18296	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	83.8063243436914	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTCCATTCTGTCC	NA	False	NA	7	True	AATAAA	-17	NA	86205017	86209233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_86205126_86207922_86207996_86208225_86208302_86208760_86208824_86208951
ENSMUSG00000007867.10_86207759_86209233_1	chr12	+	658	4	ISM	ENSMUSG00000007867.10	ENSMUST00000220711.2	372	5	21037	-270	21037	0	3prime_fragment	FALSE	canonical	3	187	junction_3	12.1928941054479	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTCCATTCTGTCC	NA	False	NA	7	True	AATAAA	-17	NA	86207758	86209233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_86207996_86208225_86208302_86208760_86208824_86208951
ENSMUSG00000007880.17_133413772_133450362_1	chr4	-	2822	15	ISM	ENSMUSG00000007880.17	ENSMUST00000105897.10	8175	20	30560	7453	828	3026	internal_fragment	FALSE	canonical	3	9	junction_3	35.1501153944749	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCGCTACCCCCCGCAGC	NA	False	NA	NA	False	NA	NA	NA	133450362	133413771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_133413868_133413950_133414102_133414514_133414691_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149
ENSMUSG00000007891.17_141929654_141941617_1	chr7	-	1963	9	FSM	ENSMUSG00000007891.17	ENSMUST00000151120.9	2127	9	158	6	-23	0	multi-exon	FALSE	canonical	3	1941	junction_4	107.727593377927	5628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTATTGGTGTGCTCTG	8842	False	NA	-8	True	AATAAA	-17	NA	141941617	141929653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ENSMUSG00000007892.9_61820566_61821824_1	chr9	-	493	3	NNC	ENSMUSG00000007892.9	novel	499	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6124	370657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGACTGGTCTCACTTG	NA	False	NA	-28	True	AATAAA	-14	NA	61821824	61820565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_61820804_61821169_61821245_61821644
ENSMUSG00000007944.9_27346978_27355633_1	chr7	+	581	3	NNC	ENSMUSG00000007944.9	novel	2052	3	NA	NA	-6362	-1138	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	1.5	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTTTGTGTGGTCTTA	NA	False	NA	11	True	NA	NA	NA	27346977	27355633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_27347078_27354336_27354520_27355335
ENSMUSG00000007987.13_136937004_136942098_1	chr5	+	911	5	FSM	ENSMUSG00000007987.13	ENSMUST00000200157.5	3071	5	0	2160	0	63	multi-exon	FALSE	canonical	3	57	junction_4	11.0989864402116	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTAGCACTGTGTTTTC	4055	False	NA	6	True	NA	NA	NA	136937003	136942098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_136937125_136939977_136940055_136940155_136940246_136940542_136940746_136941678
ENSMUSG00000008035.13_10583823_10585936_1	chrX	+	1832	2	FSM	ENSMUSG00000008035.13	ENSMUST00000008179.7	2019	2	194	-7	116	7	multi-exon	FALSE	canonical	3	265	junction_1	0	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACAAGTGTGTGTTGCT	1673	False	NA	NA	False	AATAAA	-22	NA	10583822	10585936	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_10583944_10584225
ENSMUSG00000008090.15_108852794_108854800_1	chr5	+	1685	3	ISM	ENSMUSG00000008090.15	ENSMUST00000013633.12	2329	7	10426	-38	-146	10	3prime_fragment	FALSE	canonical	3	107	junction_1	1	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTCCTTTTCTCATTCT	NA	False	NA	14	True	AAGAAA	-1	NA	108852793	108854800	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_108853006_108853084_108853439_108853681
ENSMUSG00000008140.19_44139535_44145852_1	chr7	-	1597	7	FSM	ENSMUSG00000008140.19	ENSMUST00000239015.2	1855	7	85	173	0	0	multi-exon	FALSE	canonical	3	638	junction_1	150.719386056782	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTGCCTTCTGTGCTTG	NA	False	NA	-1	True	ATTAAA	-31	NA	44145852	44139534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ENSMUSG00000008153.13_124407718_124427150_1	chr6	-	2424	8	ISM	ENSMUSG00000008153.13	ENSMUST00000112523.8	3703	18	12553	0	-19	0	3prime_fragment	FALSE	canonical	3	22	junction_7	10.5211157940126	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGCTTGCTGTTTACC	9234	False	NA	NA	False	AATAAA	-15	NA	124427150	124407717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426598_124426732
ENSMUSG00000008200.16_90608131_90610819_1	chr2	+	1207	3	ISM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	32417	546	2244	-546	3prime_fragment	FALSE	canonical	3	352	junction_2	5.5	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTATCCTTTTGCTCTT	8613	False	NA	11	True	AATAAA	-20	NA	90608130	90610819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_90608265_90609542_90609701_90609904
ENSMUSG00000008206.17_4543453_4574057_1	chr8	+	1598	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	254	7623	0	6	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGCGCCAGAGCTTAA	NA	False	NA	17	True	AATAAA	-18	NA	4543452	4574057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
ENSMUSG00000008206.17_4543521_4574676_1	chr8	+	2149	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	322	7004	0	-446	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGCCTGGCATGGTGAC	NA	False	NA	6	True	AATAAA	-18	NA	4543520	4574676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
ENSMUSG00000008226.15_73143003_73152815_1	chr2	+	1082	5	ISM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	58	15347	0	449	5prime_fragment	FALSE	canonical	3	52	junction_4	23.0475052879916	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTTGTTTGTTTGTAT	NA	False	NA	NA	False	ATTAAA	-22	NA	73143002	73152815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328
ENSMUSG00000008301.12_56706083_56720263_1	chr18	+	1232	5	FSM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	189	521	189	2	multi-exon	FALSE	canonical	3	376	junction_1	34.4818792991333	1500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCATTTCTACTGAGGT	NA	False	NA	17	True	AATAAA	-18	NA	56706082	56720263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362_56717447_56719948
ENSMUSG00000008301.12_56706083_56720580_1	chr18	+	1549	5	FSM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	189	204	189	-204	multi-exon	FALSE	canonical	3	376	junction_1	34.4818792991333	2294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCAGCTGTTACATTCA	NA	False	NA	NA	False	ATTAAA	-22	NA	56706082	56720580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362_56717447_56719948
ENSMUSG00000008307.12_3633978_3646106_2	chr5	+	1889	5	Fusion	ENSMUSG00000005907.15_ENSMUSG00000008307.12	novel	773	6	NA	NA	3480	-9756	multi-exon	FALSE	non_canonical	0	0	junction_1	0	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCGCCAGCCGCGCTC	NA	False	NA	NA	False	NA	NA	NA	3633977	3646106	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr5_+_3634808_3640222_3640804_3641669_3641816_3645254_3645446_3645965
ENSMUSG00000008333.13_142904959_142913660_1	chr2	+	948	7	FSM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	0	1113	0	-1113	multi-exon	FALSE	canonical	3	784	junction_1	113.59540777103	4517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTACTGGTTTATTG	1988	False	NA	13	True	AATAAA	-13	NA	142904958	142913660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ENSMUSG00000008333.13_142904959_142913660_2	chr2	+	940	7	NNC	ENSMUSG00000008333.13	novel	2061	7	NA	NA	0	-1113	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	364.937627851969	4376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTACTGGTTTATTG	1988	False	NA	13	True	AATAAA	-13	NA	142904958	142913660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_142905019_142906461_142906551_142907103_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ENSMUSG00000008333.13_142904959_142913979_1	chr2	+	1267	7	FSM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	0	794	0	-794	multi-exon	FALSE	canonical	3	784	junction_1	113.59540777103	4709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCTTTTTTCAGAAGT	1988	False	NA	19	True	AATAAA	-20	NA	142904958	142913979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ENSMUSG00000008348.10_125463029_125464090_1	chr5	-	835	2	NNC	ENSMUSG00000008348.10	novel	2618	2	NA	NA	2160	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTTGGTTGGTTC	NA	False	NA	0	True	AATAAA	-26	NA	125464090	125463028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_125463233_125463459
ENSMUSG00000008348.10_125463029_125465056_1	chr5	-	1573	2	NNC	ENSMUSG00000008348.10	novel	2618	2	NA	NA	1194	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTTGGTTGGTTC	NA	False	NA	0	True	AATAAA	-26	NA	125465056	125463028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_125463254_125463708
ENSMUSG00000008348.10_125465259_125466818_1	chr5	-	128	2	FSM	ENSMUSG00000008348.10	ENSMUST00000136312.2	2618	2	260	2230	260	-536	multi-exon	FALSE	canonical	3	916	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAGAATGTCAAGGCAAAG	NA	False	NA	NA	False	NA	NA	NA	125466818	125465258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_125465329_125466760
ENSMUSG00000008373.17_3632991_3643922_1	chr7	+	1574	14	FSM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	7	1563	0	-306	multi-exon	FALSE	canonical	3	674	junction_1	77.2880572079687	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCCCGCACTCCAGGTGA	2940	False	NA	NA	False	NA	NA	NA	3632990	3643922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ENSMUSG00000008373.17_3632991_3644228_1	chr7	+	1880	14	FSM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	7	1257	0	0	multi-exon	FALSE	canonical	3	674	junction_1	77.2880572079687	1917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGGTGTGAGTGATTAT	2940	False	NA	14	True	ATTAAA	-22	NA	3632990	3644228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ENSMUSG00000008393.10_8478560_8490019_1	chr16	-	737	4	NNC	ENSMUSG00000008393.10	novel	2858	4	NA	NA	0	-2116	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	166.567303714344	850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCACCTGCGGAGGCTGA	NA	False	NA	NA	False	ATTAAA	-16	NA	8490019	8478559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_8478968_8481450_8481569_8482118_8482287_8489976
ENSMUSG00000008393.10_8478560_8490019_2	chr16	-	742	4	FSM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	0	2116	0	-2116	multi-exon	FALSE	canonical	3	300	junction_3	44.5146667465405	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCACCTGCGGAGGCTGA	NA	False	NA	NA	False	ATTAAA	-16	NA	8490019	8478559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_8478968_8481450_8481574_8482118_8482287_8489976
ENSMUSG00000008450.9_106587277_106607034_1	chr8	+	1955	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	65	-1072	0	1072	multi-exon	FALSE	canonical	3	2641	junction_1	453.90775494587	16986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGTCTCTTTATTCCTA	NA	False	NA	28	True	AATAAA	-15	NA	106587276	106607034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
ENSMUSG00000008475.14_152642407_152650268_1	chr1	+	720	4	FSM	ENSMUSG00000008475.14	ENSMUST00000077755.11	1914	4	114	1080	114	122	multi-exon	FALSE	canonical	0	0	junction_1	649.932817040859	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTCAGTGGGGATGT	NA	False	NA	26	True	AATGAA	-23	NA	152642406	152650268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_152642619_152644611_152644685_152647114_152647292_152650010
ENSMUSG00000008475.14_152642407_152651348_1	chr1	+	1800	4	FSM	ENSMUSG00000008475.14	ENSMUST00000077755.11	1914	4	114	0	114	0	multi-exon	FALSE	canonical	0	0	junction_1	649.932817040859	1502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTAACTCTCCAGTTA	NA	False	NA	100	True	AATAAA	-35	NA	152642406	152651348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_152642619_152644611_152644685_152647114_152647292_152650010
ENSMUSG00000008604.12_88461071_88475705_1	chr3	+	1997	11	FSM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	6	1327	0	-1327	multi-exon	FALSE	canonical	3	1295	junction_8	115.436605979213	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGGATTTTGATTCGTT	6111	False	NA	NA	False	NA	NA	NA	88461070	88475705	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ENSMUSG00000008604.12_88461071_88475959_1	chr3	+	2251	11	FSM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	6	1073	0	-1073	multi-exon	FALSE	canonical	3	1295	junction_8	115.436605979213	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTTGAATCTCACTCTT	6111	False	NA	NA	False	NA	NA	NA	88461070	88475959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ENSMUSG00000008682.14_73314466_73316741_1	chrX	+	836	6	NIC	ENSMUSG00000008682.14	novel	855	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_1	3675.69005222149	175472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314465	73316741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_73314485_73314584_73314631_73315265_73315514_73315784_73315924_73316277_73316441_73316520
ENSMUSG00000008682.14_73314466_73316741_2	chrX	+	835	6	ISM	ENSMUSG00000008682.14	ENSMUST00000151702.8	648	7	3	-110	0	0	intron_retention	FALSE	canonical	3	57	junction_1	3676.97655146181	186718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314465	73316741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_73314485_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277
ENSMUSG00000008683.17_117708287_117715017_1	chr7	-	562	5	NNC	ENSMUSG00000008683.17	novel	640	5	NA	NA	-117	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4299.60808533755	61620	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715017	117708286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117714889
ENSMUSG00000008683.17_117708287_117715122_1	chr7	-	594	5	NIC	ENSMUSG00000008683.17	novel	640	5	NA	NA	-222	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	4290.87441554749	64773	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715122	117708286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117714962
ENSMUSG00000008683.17_117708287_117715411_1	chr7	-	479	5	NNC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3600.67732343513	97211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715411	117708286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_117708417_117709155_117709242_117714007_117714068_117714319_117714470_117715358
ENSMUSG00000008683.17_117708287_117715411_2	chr7	-	486	5	NNC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3600.67732343513	105607	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715411	117708286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_117708417_117709155_117709242_117714007_117714068_117714312_117714470_117715358
ENSMUSG00000008683.17_117708287_117715411_3	chr7	-	805	6	NNC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	126	junction_2	4662.78583681473	1417	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715411	117708286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_117708417_117709155_117709242_117711545_117711864_117714007_117714088_117714331_117714470_117715358
ENSMUSG00000008683.17_117708287_117715411_4	chr7	-	407	4	NIC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	50	junction_2	3923.91168209593	1003	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715411	117708286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_117708417_117709155_117709242_117714331_117714470_117715358
ENSMUSG00000008683.17_117708287_117715411_5	chr7	-	526	5	NIC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	4285.46860769041	138214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715411	117708286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117715319
ENSMUSG00000008683.17_117708287_117715411_6	chr7	-	401	4	NIC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4720.99794064301	1333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715411	117708286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_117708417_117714007_117714088_117714331_117714470_117715358
ENSMUSG00000008683.17_117708287_117715411_7	chr7	-	467	5	NNC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3600.67732343513	21691	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715411	117708286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_117708417_117709155_117709242_117714007_117714068_117714331_117714470_117715358
ENSMUSG00000008683.17_117708287_117715411_8	chr7	-	471	5	NNC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3600.67732343513	62987	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715411	117708286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_117708417_117709155_117709242_117714007_117714068_117714327_117714470_117715358
ENSMUSG00000008683.17_117708287_117715411_9	chr7	-	471	5	NNC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3600.67732343513	39646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715411	117708286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_117708417_117709155_117709242_117714007_117714088_117714347_117714470_117715358
ENSMUSG00000008690.16_89239966_89255783_1	chr15	+	2021	20	NIC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	0	17	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	237.547405970056	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239965	89255783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254507_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUSG00000008690.16_89239966_89255783_2	chr15	+	1933	20	FSM	ENSMUSG00000008690.16	ENSMUST00000036987.12	3223	20	44	1246	0	17	multi-exon	FALSE	canonical	1	145	junction_1	244.22211859964	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239965	89255783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_89240054_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUSG00000008690.16_89239966_89255783_3	chr15	+	2028	20	NNC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	0	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	319.412835616834	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239965	89255783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_89240147_89244558_89244665_89247639_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254516_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUSG00000008690.16_89239966_89255783_5	chr15	+	1928	20	NIC	ENSMUSG00000008690.16	novel	3223	20	NA	NA	0	17	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	297.898158804969	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239965	89255783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_89240054_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254507_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUSG00000008690.16_89239966_89255783_6	chr15	+	2017	20	NNC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	0	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	237.547405970056	1231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239965	89255783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254606_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUSG00000008690.16_89255843_89258315_1	chr15	+	1328	4	NIC	ENSMUSG00000008690.16	novel	3223	20	NA	NA	887	1286	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGGTCTTGTGTTTCCG	NA	False	NA	NA	False	NA	NA	NA	89255842	89258315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_89256669_89257625_89257806_89257885_89258027_89258134
ENSMUSG00000008822.16_85319321_85327192_1	chr12	-	482	3	FSM	ENSMUSG00000008822.16	ENSMUST00000008966.13	648	3	17	149	0	0	multi-exon	FALSE	canonical	3	386	junction_2	28.5	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGAACTATTCTGTG	4308	False	NA	NA	False	ATTAAA	-3	NA	85327192	85319320	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_85319602_85326764_85326857_85327083
ENSMUSG00000008892.13_23067436_23083774_1	chr8	-	1020	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	0	334	0	-334	multi-exon	FALSE	canonical	3	2053	junction_8	117.712573669936	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAACTTTTTATTCTTC	NA	False	NA	NA	False	AATGAA	-42	NA	23083774	23067435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ENSMUSG00000008958.15_95018353_95030244_1	chr3	+	272	3	NNC	ENSMUSG00000008958.15	novel	361	2	NA	NA	0	-118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCTGATGTGTAAGG	2580	False	NA	45	True	AATAAA	-13	NA	95018352	95030244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95018526_95025535_95025568_95030177
ENSMUSG00000008958.15_95018353_95030244_2	chr3	+	295	3	NNC	ENSMUSG00000008958.15	novel	361	2	NA	NA	0	-118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCTGATGTGTAAGG	2580	False	NA	45	True	AATAAA	-13	NA	95018352	95030244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95018526_95025535_95025568_95030154
ENSMUSG00000008958.15_95018353_95030244_3	chr3	+	1307	6	NNC	ENSMUSG00000008958.15	novel	1456	6	NA	NA	0	-118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	358.969413738831	1227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCTGATGTGTAAGG	2580	False	NA	45	True	AATAAA	-13	NA	95018352	95030244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95018515_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
ENSMUSG00000008976.17_84624759_84631893_1	chr16	+	621	4	NNC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-7054	-22573	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	16049	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGAGGAAGTGGAGGGT	NA	False	NA	NA	False	NA	NA	NA	84624758	84631893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_84624884_84625312_84625438_84628216_84628391_84631696
ENSMUSG00000008976.17_84624759_84631893_2	chr16	+	493	4	NIC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-7054	-22573	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGAGGAAGTGGAGGGT	NA	False	NA	NA	False	NA	NA	NA	84624758	84631893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_84624884_84625312_84625438_84628216_84628396_84631829
ENSMUSG00000008976.17_84624759_84631893_3	chr16	+	619	4	NNC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-7054	-22573	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	9545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGAGGAAGTGGAGGGT	NA	False	NA	NA	False	NA	NA	NA	84624758	84631893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_84624884_84625312_84625438_84628216_84628396_84631703
ENSMUSG00000008976.17_84624759_84631893_4	chr16	+	543	4	NIC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-7054	-22573	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGAGGAAGTGGAGGGT	NA	False	NA	NA	False	NA	NA	NA	84624758	84631893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_84624884_84625312_84625438_84628216_84628396_84631779
ENSMUSG00000008976.17_84624759_84632043_1	chr16	+	643	4	NIC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-7054	-22423	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGAGTCAGCGTCCCGATC	NA	False	NA	NA	False	NA	NA	NA	84624758	84632043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_84624884_84625312_84625438_84628216_84628396_84631829
ENSMUSG00000008976.17_84631813_84660667_1	chr16	+	4666	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	0	-2464	0	0	multi-exon	FALSE	canonical	3	375	junction_1	83.9617784882715	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTGTTTTC	NA	False	NA	6	True	AATAAA	-15	NA	84631812	84660667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ENSMUSG00000008976.17_84632263_84658482_1	chr16	+	2551	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	251	2185	251	279	multi-exon	FALSE	canonical	3	317	junction_1	99.7045016753055	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTCTTTTGAATATT	NA	False	NA	22	True	AATAAA	-18	NA	84632262	84658482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ENSMUSG00000008999.8_172711479_172712957_1	chr2	-	716	2	NNC	ENSMUSG00000008999.8	novel	3670	7	NA	NA	68928	-1674	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTAGGACGTTACAGATA	NA	False	NA	-38	True	AATAAA	-16	NA	172712957	172711478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_172712080_172712842
ENSMUSG00000008999.8_172711479_172781885_1	chr2	-	1767	7	FSM	ENSMUSG00000008999.8	ENSMUST00000009143.8	3670	7	229	1674	0	-1674	multi-exon	FALSE	canonical	3	82	junction_3	13.8734358477712	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTAGGACGTTACAGATA	NA	False	NA	-38	True	AATAAA	-16	NA	172781885	172711478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447
ENSMUSG00000009013.6_115436481_115438993_1	chr5	-	701	3	NNC	ENSMUSG00000009013.6	novel	2030	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	367	junction_2	1708.5	23247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115438993	115436480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_115436893_115438571_115438710_115438842
ENSMUSG00000009013.6_115436481_115438993_2	chr5	-	653	3	FSM	ENSMUSG00000009013.6	ENSMUST00000009157.4	2030	3	65	1312	0	0	multi-exon	FALSE	canonical	3	3784	junction_1	210.5	23342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115438993	115436480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_115436893_115438571_115438710_115438890
ENSMUSG00000009030.15_37240086_37249233_1	chr2	-	2747	4	FSM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	111	0	-25	0	multi-exon	FALSE	canonical	3	157	junction_1	14.3527000944073	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGTATATTAGATATTT	NA	False	NA	-7	True	AATAAA	-20	NA	37249233	37240085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37249154
ENSMUSG00000009030.15_37240600_37249233_1	chr2	-	2233	4	FSM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	111	514	-25	0	multi-exon	FALSE	canonical	3	157	junction_1	14.3527000944073	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGATATTTAAAAGCCA	NA	False	NA	-19	True	AATAAA	-10	NA	37249233	37240599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37249154
ENSMUSG00000009035.16_79244885_79287483_1	chr15	-	3340	9	FSM	ENSMUSG00000009035.16	ENSMUST00000074991.10	3627	9	286	1	-7	0	multi-exon	FALSE	canonical	3	271	junction_8	29.0298876160415	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCTGCCAGCGAGGT	NA	False	NA	-4	True	AATATA	-33	NA	79287483	79244884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ENSMUSG00000009075.3_4654678_4687533_1	chr11	-	647	6	NNC	ENSMUSG00000009075.3	novel	2628	5	NA	NA	9245	32214	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	283	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTCTGCTCGCTGGGATT	NA	False	NA	NA	False	NA	NA	NA	4687533	4654677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ENSMUSG00000009075.3_4654678_4687669_2	chr11	-	783	6	NNC	ENSMUSG00000009075.3	novel	2628	5	NA	NA	9109	32214	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1820	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTCTGCTCGCTGGGATT	NA	False	NA	NA	False	NA	NA	NA	4687669	4654677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ENSMUSG00000009075.3_4654678_4687669_3	chr11	-	761	6	NNC	ENSMUSG00000009075.3	novel	2628	5	NA	NA	9109	32214	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	332	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTCTGCTCGCTGGGATT	NA	False	NA	NA	False	NA	NA	NA	4687669	4654677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_4654713_4672357_4672490_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ENSMUSG00000009076.11_4654678_4687533_1	chr11	+	656	6	FSM	ENSMUSG00000009076.11	ENSMUST00000009220.5	792	6	0	136	0	-136	multi-exon	FALSE	canonical	3	156	junction_1	205.698225563567	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCAGAGCTGCCTTCCC	NA	False	NA	13	True	AGTAAA	-18	NA	4654677	4687533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_4654722_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ENSMUSG00000009076.11_4654678_4687669_1	chr11	+	781	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	264.574072803818	1574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4654677	4687669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682068_4682179_4687331
ENSMUSG00000009076.11_4654678_4687669_2	chr11	+	778	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	273.364518546208	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4654677	4687669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_4654713_4672357_4672512_4678584_4678648_4680191_4680268_4682066_4682179_4687331
ENSMUSG00000009076.11_4654678_4687669_3	chr11	+	629	5	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	290.684106892689	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4654677	4687669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_4654713_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ENSMUSG00000009076.11_4672355_4687669_1	chr11	+	746	5	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	-6230	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	282.027037710926	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4672354	4687669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_4672512_4678584_4678648_4680186_4680268_4682071_4682179_4687331
ENSMUSG00000009079.17_5019689_5020349_1	chr11	-	537	2	ISM	ENSMUSG00000009079.17	ENSMUST00000130118.2	649	3	542	-285	542	0	3prime_fragment	FALSE	canonical	3	4970	junction_1	0	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTCCTCCTCTGTTCTC	NA	False	NA	-13	True	AATAAA	-23	NA	5020349	5019688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_5020104_5020227
ENSMUSG00000009079.17_5019897_5020281_1	chr11	-	261	2	ISM	ENSMUSG00000009079.17	ENSMUST00000130118.2	649	3	610	-77	610	0	3prime_fragment	FALSE	canonical	3	4970	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGAGTTTTTTTTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	5020281	5019896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_5020104_5020227
ENSMUSG00000009079.17_5019897_5021105_1	chr11	-	668	4	ISM	ENSMUSG00000009079.17	ENSMUST00000102930.10	2174	18	27937	0	-214	0	3prime_fragment	FALSE	canonical	3	4427	junction_3	237.787486821508	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGAGTTTTTTTTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	5021105	5019896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995
ENSMUSG00000009090.18_4936912_4992579_1	chr11	+	3785	21	FSM	ENSMUSG00000009090.18	ENSMUST00000009234.16	4085	21	88	212	0	-150	multi-exon	FALSE	canonical	3	239	junction_7	27.5174490096738	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCACATTTCTTCCCTC	NA	False	NA	20	True	AATAAA	-20	NA	4936911	4992579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ENSMUSG00000009108.16_107994054_108008607_1	chr3	+	1762	9	Fusion	ENSMUSG00000009108.16_ENSMUSG00000056411.3	novel	2518	7	NA	NA	762	0	multi-exon	FALSE	canonical	2	2	junction_7	1.61535599791501	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGTTTTACTGGTCC	NA	False	NA	NA	False	ATTAAA	-13	NA	107994053	108008607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr3_+_107994208_108000509_108000683_108002456_108002500_108002754_108002897_108003665_108003824_108005282_108005412_108005626_108005757_108007303_108007458_108007928
ENSMUSG00000009112.5_120813173_120865964_1	chr6	+	3112	7	FSM	ENSMUSG00000009112.5	ENSMUST00000009256.4	6925	7	-26	3839	0	-3839	multi-exon	FALSE	canonical	3	188	junction_2	15.192286054296	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAAGACCTGATGTTTT	NA	False	NA	10	True	AATAAA	-21	NA	120813172	120865964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
ENSMUSG00000009145.7_83043834_83044197_1	chr6	+	188	2	NNC	ENSMUSG00000009145.7	novel	3257	12	NA	NA	8756	-102	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	34847	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTCTATGATGCCAA	4554	False	NA	NA	False	AATAAA	-17	NA	83043833	83044197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_83044007_83044182
ENSMUSG00000009246.15_142623161_142624824_1	chr7	-	839	4	NIC	ENSMUSG00000009246.15	novel	726	5	NA	NA	2950	-271	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGTTCCTGGGAAACCGA	NA	False	NA	NA	False	NA	NA	NA	142624824	142623160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_142623251_142623491_142623588_142623672_142624030_142624528
ENSMUSG00000009291.14_77417590_77433105_1	chr10	+	797	6	FSM	ENSMUSG00000009291.14	ENSMUST00000009435.12	2294	6	36	1461	0	2	multi-exon	FALSE	canonical	3	637	junction_4	46.3188946327522	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGTTGATGTCCTTTTTG	1327	False	NA	10	True	NA	NA	NA	77417589	77433105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_77417762_77423084_77423138_77425467_77425577_77428679_77428852_77429697_77429745_77432861
ENSMUSG00000009293.18_77442059_77481827_1	chr10	+	2207	8	NIC	ENSMUSG00000112241.2	novel	512	6	NA	NA	28	4450	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	535.279480691143	418	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTTGTGTGGTGCTCA	NA	False	NA	5	True	AATAAA	-18	NA	77442058	77481827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_77442176_77445645_77445775_77449813_77449886_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
ENSMUSG00000009406.14_20800395_20816847_1	chrX	-	2787	6	FSM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	0	761	0	-761	multi-exon	FALSE	canonical	3	96	junction_1	13.1666244725062	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGTATTTTTTTTTC	NA	False	NA	-1	True	AATATA	-24	NA	20816847	20800394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
ENSMUSG00000009470.18_98980409_99027548_1	chr13	-	3551	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	0	3157	combination_of_known_junctions	TRUE	canonical	3	224	junction_23	67.7519382879703	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGGTTGTACTTCTTA	NA	False	NA	-4	True	ATTAAA	-17	NA	99027548	98980408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ENSMUSG00000009470.18_98980409_99062862_1	chr13	-	3541	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	30	4882	0	3157	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGGTTGTACTTCTTA	NA	False	NA	-4	True	ATTAAA	-17	NA	99062862	98980408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ENSMUSG00000009470.18_98980538_99027548_1	chr13	-	3422	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	0	3028	combination_of_known_junctions	FALSE	canonical	3	224	junction_23	67.7519382879703	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCTGTGACATGCCGAC	NA	False	NA	-10	True	AATAAA	-24	NA	99027548	98980537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ENSMUSG00000009470.18_98980538_99062862_1	chr13	-	3412	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	30	5011	0	3028	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCTGTGACATGCCGAC	NA	False	NA	-10	True	AATAAA	-24	NA	99062862	98980537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ENSMUSG00000009535.14_68433463_68454978_1	chr18	+	1829	11	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	430.6471989924	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAATTCTGAGACTCT	NA	False	NA	88	True	AATAAA	-18	NA	68433462	68454978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68451064_68451183_68452188_68452291_68453296_68453331_68454388_68454689_68454720
ENSMUSG00000009535.14_68433463_68454978_2	chr18	+	1994	12	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	327.063064154123	1996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAATTCTGAGACTCT	NA	False	NA	88	True	AATAAA	-18	NA	68433462	68454978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388_68454689_68454720
ENSMUSG00000009535.14_68433463_68454978_3	chr18	+	1997	11	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	432.781053189716	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAATTCTGAGACTCT	NA	False	NA	88	True	AATAAA	-18	NA	68433462	68454978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452328_68454388_68454689_68454720
ENSMUSG00000009535.14_68433463_68454978_4	chr18	+	2026	11	FSM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	37	2945	0	1	multi-exon	FALSE	canonical	3	765	junction_7	139.06832852954	2153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAATTCTGAGACTCT	NA	False	NA	88	True	AATAAA	-18	NA	68433462	68454978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ENSMUSG00000009535.14_68433463_68454978_8	chr18	+	1998	12	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	327.063064154123	1811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAATTCTGAGACTCT	NA	False	NA	88	True	AATAAA	-18	NA	68433462	68454978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388_68454699_68454726
ENSMUSG00000009549.15_118306331_118310152_1	chr2	-	748	4	NNC	ENSMUSG00000009549.15	novel	798	5	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	698.728845833632	6748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGGTTTGTTTTTCTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	118310152	118306330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_118306789_118309378_118309515_118309858_118309932_118310071
ENSMUSG00000009549.15_118306331_118310152_3	chr2	-	746	5	NNC	ENSMUSG00000009549.15	novel	798	5	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	634.084576377631	7273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGGTTTGTTTTTCTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	118310152	118306330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309920_118310071
ENSMUSG00000009575.15_103107152_103148274_1	chr15	-	1653	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-31	7181	-31	530	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCTGTACCAAAGAGGCA	NA	False	NA	NA	False	NA	NA	NA	103148274	103107151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ENSMUSG00000009575.15_103107351_103148274_1	chr15	-	1454	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-31	7380	-31	331	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGAGTCTGTAAGCTGT	NA	False	NA	-6	True	ATTAAA	-13	NA	103148274	103107350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ENSMUSG00000009575.15_103107892_103148274_1	chr15	-	908	5	NNC	ENSMUSG00000009575.15	novel	8803	5	NA	NA	-31	-210	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	192.458437071488	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAAGTGTAGCTCTGTG	NA	False	NA	-11	True	AATATA	-14	NA	103148274	103107891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_103108219_103109227_103109324_103113918_103114106_103121498_103121682_103148159
ENSMUSG00000009575.15_103107892_103148274_2	chr15	-	913	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-31	7921	-31	-210	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAAGTGTAGCTCTGTG	NA	False	NA	-11	True	AATATA	-14	NA	103148274	103107891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ENSMUSG00000009585.19_79775860_79791624_1	chr15	+	1455	9	NIC	ENSMUSG00000009585.19	novel	826	5	NA	NA	0	54	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	219.175122618878	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGGAGACCTTTTGTTC	7502	False	NA	NA	False	NA	NA	NA	79775859	79791624	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_79776024_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUSG00000009585.19_79775860_79792114_1	chr15	+	492	4	NNC	ENSMUSG00000009585.19	novel	826	5	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	310.962305682788	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGATTAAGTTGTGCAT	7502	False	NA	1	True	NA	NA	NA	79775859	79792114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_79776024_79779611_79779760_79781895_79781988_79792026
ENSMUSG00000009585.19_79775860_79792114_2	chr15	+	1945	9	NIC	ENSMUSG00000009585.19	novel	826	5	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	219.175122618878	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGATTAAGTTGTGCAT	7502	False	NA	1	True	NA	NA	NA	79775859	79792114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_79776024_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUSG00000009585.19_79776643_79791624_1	chr15	+	1419	9	FSM	ENSMUSG00000009585.19	ENSMUST00000175714.8	1953	9	39	495	0	54	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGGAGACCTTTTGTTC	8285	False	NA	NA	False	NA	NA	NA	79776642	79791624	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUSG00000009585.19_79776643_79791624_2	chr15	+	1320	8	FSM	ENSMUSG00000009585.19	ENSMUST00000175752.8	1977	8	-6	663	0	54	multi-exon	FALSE	canonical	3	31	junction_4	224.554434107971	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGGAGACCTTTTGTTC	8285	False	NA	NA	False	NA	NA	NA	79776642	79791624	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUSG00000009585.19_79776643_79792114_2	chr15	+	1810	8	FSM	ENSMUSG00000009585.19	ENSMUST00000175752.8	1977	8	-6	173	0	-5	multi-exon	FALSE	canonical	3	31	junction_4	224.554434107971	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGATTAAGTTGTGCAT	8285	False	NA	1	True	NA	NA	NA	79776642	79792114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUSG00000009585.19_79776643_79792114_3	chr15	+	456	4	NNC	ENSMUSG00000009585.19	novel	2360	8	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	301.261053278087	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGATTAAGTTGTGCAT	8285	False	NA	1	True	NA	NA	NA	79776642	79792114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_79776771_79779611_79779760_79781895_79781988_79792026
ENSMUSG00000009585.19_79776643_79792287_1	chr15	+	2082	9	FSM	ENSMUSG00000009585.19	ENSMUST00000175714.8	1953	9	39	-168	0	0	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	1708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCCCTCACCCATCAGA	8285	False	NA	NA	False	AATAAA	-15	NA	79776642	79792287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUSG00000009585.19_79800008_79855324_1	chr15	+	2949	7	NIC	ENSMUSG00000009585.19	novel	2225	9	NA	NA	9684	55217	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGTACCCCTGTGCA	NA	False	NA	NA	False	NA	NA	NA	79800007	79855324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ENSMUSG00000009630.11_34089924_34109829_1	chr8	+	1558	7	FSM	ENSMUSG00000009630.11	ENSMUST00000009774.11	1469	7	271	-360	271	360	multi-exon	FALSE	canonical	3	909	junction_3	33.4398298772919	396	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTTAACTGTGATGTA	9136	False	NA	21	True	AATAAA	-21	NA	34089923	34109829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_34090047_34100682_34100893_34101775_34101950_34105477_34105568_34105693_34105856_34107054_34107174_34109149
ENSMUSG00000009640.12_117539030_117539450_1	chr4	-	201	2	ISM	ENSMUSG00000009640.12	ENSMUST00000135582.8	1771	10	0	7152	0	-246	5prime_fragment	FALSE	canonical	3	72	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCAGGGGCATTTGAGCG	NA	False	NA	NA	False	NA	NA	NA	117539450	117539029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_117539191_117539410
ENSMUSG00000009687.15_30732158_30736479_1	chr7	-	616	5	NNC	ENSMUSG00000009687.15	novel	817	9	NA	NA	884	0	intron_retention	FALSE	canonical	3	10	junction_4	35.9513560244951	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGGCCTCTGTCTTCT	7744	False	NA	-10	True	GATAAA	-16	NA	30736479	30732157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30736335
ENSMUSG00000009687.15_30732158_30736479_2	chr7	-	516	5	NNC	ENSMUSG00000009687.15	novel	817	9	NA	NA	884	0	intron_retention	FALSE	canonical	3	10	junction_4	35.9513560244951	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGGCCTCTGTCTTCT	7744	False	NA	-10	True	GATAAA	-16	NA	30736479	30732157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30736435
ENSMUSG00000009828.16_78020597_78075224_1	chr9	+	2395	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	0	4165	0	4	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTCATTATTTTCTT	NA	False	NA	7	True	TATAAA	-18	NA	78020596	78075224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ENSMUSG00000009863.15_140688714_140706504_1	chr4	+	942	8	FSM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	200	0	0	0	multi-exon	FALSE	canonical	3	2820	junction_2	205.868890316143	9298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCGTTACTCTCCATTAT	NA	False	NA	NA	False	AATAAA	-14	NA	140688713	140706504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
ENSMUSG00000009927.10_44318995_44321491_1	chr9	+	488	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	559	233	0	0	multi-exon	FALSE	canonical	3	5317	junction_4	3059.10970504492	129756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGTGCATCTGTTTCCT	NA	False	NA	94	True	AATAAA	-19	NA	44318994	44321491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
ENSMUSG00000009927.10_44318995_44321491_2	chr9	+	482	5	NNC	ENSMUSG00000009927.10	novel	1280	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	4881.10195037965	18496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGTGCATCTGTTTCCT	NA	False	NA	94	True	AATAAA	-19	NA	44318994	44321491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_44319055_44319284_44319381_44319982_44320161_44321250_44321350_44321442
ENSMUSG00000009995.18_73326356_73333755_1	chrX	+	2565	7	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	226	junction_5	12.5266382827424	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326355	73333755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332789_73332904
ENSMUSG00000009995.18_73326356_73333755_2	chrX	+	2480	8	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	76	junction_6	61.4664335143954	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326355	73333755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332626_73332710_73332789_73332904
ENSMUSG00000010047.13_107446316_107449971_1	chr9	+	1726	5	NNC	ENSMUSG00000010047.13	novel	1893	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	94.7532980956336	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTTCTTGTCTTTTT	NA	False	NA	11	True	ATTAAA	-13	NA	107446315	107449971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_107446433_107447302_107448270_107448690_107448781_107449256_107449669_107449831
ENSMUSG00000010048.11_107464925_107469907_1	chr9	+	1642	12	FSM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	84	330	0	0	multi-exon	FALSE	canonical	3	631	junction_11	35.5716016363504	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACTCAAGCCCTTTGTA	NA	False	NA	NA	False	AATAGA	-32	NA	107464924	107469907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ENSMUSG00000010048.11_107464925_107470237_1	chr9	+	2044	11	NIC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	631	junction_10	36.7456119829293	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	21	True	ATTAAA	-33	NA	107464924	107470237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469571_107469673
ENSMUSG00000010048.11_107464925_107470237_2	chr9	+	1969	12	NNC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	202.931898359772	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	21	True	ATTAAA	-33	NA	107464924	107470237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_107465150_107467108_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ENSMUSG00000010048.11_107464925_107470237_3	chr9	+	1967	12	NNC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	8	junction_4	201.647060950768	1255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	21	True	ATTAAA	-33	NA	107464924	107470237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467708_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ENSMUSG00000010067.14_107431896_107439462_1	chr9	+	1613	5	FSM	ENSMUSG00000010067.14	ENSMUST00000010211.7	1727	5	114	0	114	0	multi-exon	FALSE	canonical	3	50	junction_4	9.63068014212911	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTGGACTCTATAGA	NA	False	NA	9	True	AATAAA	-16	NA	107431895	107439462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107432125_107434651_107434757_107434968_107435267_107435385_107435502_107438597
ENSMUSG00000010097.16_8734437_8748274_1	chr19	+	2309	21	NNC	ENSMUSG00000010097.16	novel	2326	21	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	182.551054502569	1155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCCCATTACTGGC	8569	False	NA	35	True	GATAAA	-14	NA	8734436	8748274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745098_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ENSMUSG00000010110.18_8718777_8733006_1	chr19	+	1824	11	FSM	ENSMUSG00000010110.18	ENSMUST00000176381.8	2251	11	0	427	0	0	multi-exon	FALSE	canonical	3	140	junction_1	18.8417090519942	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	6549	False	NA	12	True	NA	NA	NA	8718776	8733006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8718940_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ENSMUSG00000010110.18_8719252_8733006_1	chr19	+	1928	11	NIC	ENSMUSG00000010110.18	novel	2112	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	55.2485293921929	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	7024	False	NA	12	True	NA	NA	NA	8719251	8733006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_8719519_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ENSMUSG00000010110.18_8719252_8733006_2	chr19	+	1895	11	NNC	ENSMUSG00000010110.18	novel	2112	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_1	54.6512579910106	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	7024	False	NA	12	True	NA	NA	NA	8719251	8733006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_8719486_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ENSMUSG00000010376.16_55899722_55909355_1	chr14	-	596	4	FSM	ENSMUSG00000010376.16	ENSMUST00000010520.10	824	4	226	2	-21	0	multi-exon	FALSE	canonical	3	1795	junction_3	42.0502345085283	5105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGACTCTTTCTTCTT	NA	False	NA	-13	True	AATAAA	-13	NA	55909355	55899721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55900083_55900871_55900955_55901268_55901317_55909251
ENSMUSG00000010406.13_54664366_54667203_1	chr14	+	487	4	NIC	ENSMUSG00000010406.13	novel	418	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1056	junction_1	226.233409459248	9405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCCAGACTCTCTCTGG	NA	False	NA	17	True	AATAAA	-18	NA	54664365	54667203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_54664418_54664490_54664696_54666040_54666106_54667038
ENSMUSG00000010517.8_109534194_109819244_1	chr4	+	2146	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	409	1913	0	-1913	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	500	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCATCCATGAGTATAT	NA	False	NA	24	True	AATAAA	-16	NA	109534193	109819244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ENSMUSG00000010538.15_88190064_88204213_1	chr3	-	371	3	NIC	ENSMUSG00000010538.15	novel	584	4	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	73.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACATGGGTCTGAGTCT	NA	False	NA	NA	False	CATAAA	-14	NA	88204213	88190063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_88190292_88202697_88202758_88204130
ENSMUSG00000010538.15_88190064_88204306_1	chr3	-	653	5	NNC	ENSMUSG00000010538.15	novel	584	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	82.9016736863617	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACATGGGTCTGAGTCT	NA	False	NA	NA	False	CATAAA	-14	NA	88204306	88190063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_88190292_88193307_88193377_88194404_88194525_88202697_88202758_88204130
ENSMUSG00000010538.15_88191737_88204213_1	chr3	-	1149	4	Fusion	ENSMUSG00000103766.6_ENSMUSG00000010538.15	novel	600	2	NA	NA	-10	-1670	multi-exon	FALSE	canonical	2	5	junction_1	81.9878039710785	1121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTGTTTTGTTTTGTTT	NA	False	NA	NA	False	AATAAA	-45	NA	88204213	88191736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr3_-_88192623_88194404_88194525_88202697_88202758_88204130
ENSMUSG00000010538.15_88193038_88204159_1	chr3	-	443	5	Fusion	ENSMUSG00000103766.6_ENSMUSG00000010538.15	novel	600	2	NA	NA	-14	-2971	multi-exon	FALSE	canonical	3	9	junction_1	82.118816357763	1164	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCCAAAACAAAAAGTTGT	NA	False	NA	NA	False	NA	NA	NA	88204159	88193037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr3_-_88193203_88193307_88193377_88194404_88194525_88202697_88202758_88204130
ENSMUSG00000010554.15_74661656_74708965_1	chr11	+	2198	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	0	10386	0	245	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAGTGGATCCATTTTT	8494	False	NA	6	True	AAAAAG	-5	NA	74661655	74708965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ENSMUSG00000010554.15_74661656_74708965_2	chr11	+	2264	11	NIC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	0	245	combination_of_known_junctions	FALSE	canonical	3	58	junction_5	139.204202522769	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAGTGGATCCATTTTT	8494	False	NA	6	True	AAAAAG	-5	NA	74661655	74708965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ENSMUSG00000010554.15_74661656_74709517_1	chr11	+	2750	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	0	9834	0	797	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGATCCTGTTTGAATC	8494	False	NA	101	True	AATATA	-19	NA	74661655	74709517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ENSMUSG00000010554.15_74661656_74709517_2	chr11	+	2816	11	NIC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	0	797	combination_of_known_junctions	FALSE	canonical	3	58	junction_5	139.204202522769	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGATCCTGTTTGAATC	8494	False	NA	101	True	AATATA	-19	NA	74661655	74709517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ENSMUSG00000010554.15_74661742_74709424_1	chr11	+	2571	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	86	9927	0	704	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAGCATTGTTTTGTAAC	8580	False	NA	8	True	AATAAA	-19	NA	74661741	74709424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ENSMUSG00000010592.10_50586425_50600627_1	chr17	-	2888	10	NIC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_3	120.807570689102	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCACTGACTTACTGTCC	NA	False	NA	-5	True	AATAAA	-16	NA	50600627	50586424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_50588340_50590155_50590255_50591265_50591380_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ENSMUSG00000010592.10_50586563_50600627_1	chr17	-	2750	10	NIC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	0	-138	combination_of_known_junctions	FALSE	canonical	3	158	junction_3	120.807570689102	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGGAGTCAAGTATTTAA	NA	False	NA	-18	True	AATAAA	-17	NA	50600627	50586562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_50588340_50590155_50590255_50591265_50591380_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ENSMUSG00000010592.10_50588079_50600627_1	chr17	-	1285	11	FSM	ENSMUSG00000010592.10	ENSMUST00000010736.9	2976	11	37	1654	0	0	multi-exon	FALSE	canonical	3	352	junction_4	74.6324996231534	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGATAAAAAAT	NA	False	NA	NA	False	AAGAAA	-15	NA	50600627	50588078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_50588340_50590155_50590255_50591265_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ENSMUSG00000010592.10_50588132_50600627_1	chr17	-	1181	10	NIC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_3	120.807570689102	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAACTGGTTTTGTGTTC	NA	False	NA	74	True	NA	NA	NA	50600627	50588131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_50588340_50590155_50590255_50591265_50591380_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ENSMUSG00000010592.10_50588132_50600627_2	chr17	-	1232	11	FSM	ENSMUSG00000010592.10	ENSMUST00000010736.9	2976	11	37	1707	0	0	multi-exon	FALSE	canonical	3	352	junction_4	74.6324996231534	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAACTGGTTTTGTGTTC	NA	False	NA	74	True	NA	NA	NA	50600627	50588131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_50588340_50590155_50590255_50591265_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ENSMUSG00000010663.6_10160403_10173092_1	chr19	+	2163	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	151	1146	0	411	multi-exon	FALSE	canonical	3	652	junction_7	60.0436480355873	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAGTTGTCAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	10160402	10173092	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ENSMUSG00000010663.6_10160403_10173474_1	chr19	+	2545	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	151	764	0	-764	multi-exon	FALSE	canonical	3	652	junction_7	60.0436480355873	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCATTGTTGTCTGCTCA	NA	False	NA	111	True	NA	NA	NA	10160402	10173474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ENSMUSG00000010663.6_10160403_10174241_1	chr19	+	3312	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	151	-3	0	0	multi-exon	FALSE	canonical	3	652	junction_7	60.0436480355873	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTATTCATTTGAAAT	NA	False	NA	21	True	AATAAA	-22	NA	10160402	10174241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ENSMUSG00000010755.18_143111444_143153793_1	chr7	-	2461	22	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_21	315.496333588738	2483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153793	143111443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142315_143153713
ENSMUSG00000010755.18_143111444_143153793_2	chr7	-	2443	22	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_20	300.317345380695	2177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153793	143111443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140912_143142228_143142321_143153718
ENSMUSG00000010755.18_143111444_143153793_3	chr7	-	2456	22	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	316.06880189026	1881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153793	143111443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_143111744_143112864_143112949_143113385_143113436_143115591_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ENSMUSG00000010911.13_102904040_102922986_1	chr2	+	1444	6	ISM	ENSMUSG00000010911.13	ENSMUST00000011055.7	919	7	20	3	0	3	intron_retention	FALSE	canonical	3	333	junction_2	37.3363094051889	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTGGAAATTTTCTTGA	4613	False	NA	22	True	AATAAA	-44	NA	102904039	102922986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093
ENSMUSG00000010911.13_102904040_102922986_2	chr2	+	857	7	NNC	ENSMUSG00000010911.13	novel	919	7	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	133.735331490556	1669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTGGAAATTTTCTTGA	4613	False	NA	22	True	AATAAA	-44	NA	102904039	102922986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922223_102922809
ENSMUSG00000010914.11_102851525_102903820_1	chr2	-	2363	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	38	105	-13	-105	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTAAATTTGTATTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	102903820	102851524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
ENSMUSG00000010914.11_102852137_102903820_1	chr2	-	1751	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	38	717	-13	-717	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTTTGGTTCATTTG	NA	False	NA	0	True	ATTAAA	-16	NA	102903820	102852136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
ENSMUSG00000010914.11_102852137_102903820_2	chr2	-	1670	10	NIC	ENSMUSG00000010914.11	novel	2506	11	NA	NA	-13	-717	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	106.464391543213	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTTTGGTTCATTTG	NA	False	NA	0	True	ATTAAA	-16	NA	102903820	102852136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102903634
ENSMUSG00000010936.12_111345446_111447034_1	chr8	+	2858	19	FSM	ENSMUSG00000010936.12	ENSMUST00000034190.11	3069	19	215	-4	202	4	multi-exon	FALSE	canonical	3	368	junction_15	41.1869046070606	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCCTGCTCCTTCTCTG	7576	False	NA	20	True	AATAAA	-24	NA	111345445	111447034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ENSMUSG00000011114.19_37560478_37568533_1	chr9	-	1485	9	NNC	ENSMUSG00000011114.19	novel	1984	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	569.500823089835	4746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTATTTGTTTCTTCTTGT	NA	False	NA	-20	True	AATAAA	-18	NA	37568533	37560477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_37560800_37561326_37561470_37562249_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511_37565733_37566317_37566389_37568293
ENSMUSG00000011114.19_37560478_37568533_2	chr9	-	1483	9	NNC	ENSMUSG00000011114.19	novel	1984	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	569.500823089835	3496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTATTTGTTTCTTCTTGT	NA	False	NA	-20	True	AATAAA	-18	NA	37568533	37560477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_37560800_37561326_37561463_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511_37565733_37566317_37566389_37568293
ENSMUSG00000011114.19_37560478_37568533_3	chr9	-	1477	9	NNC	ENSMUSG00000011114.19	novel	1984	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	557.119545070894	3166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTATTTGTTTCTTCTTGT	NA	False	NA	-20	True	AATAAA	-18	NA	37568533	37560477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511_37565720_37566317_37566389_37568293
ENSMUSG00000011114.19_37560478_37568533_4	chr9	-	1480	9	NNC	ENSMUSG00000011114.19	novel	1984	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	568.47355919163	2961	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTATTTGTTTCTTCTTGT	NA	False	NA	-20	True	AATAAA	-18	NA	37568533	37560477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_37560800_37561326_37561470_37562244_37562356_37562595_37562684_37563910_37564058_37564328_37564466_37565511_37565733_37566317_37566389_37568293
ENSMUSG00000011254.17_45838694_45846311_1	chr11	-	1193	7	NNC	ENSMUSG00000011254.17	novel	2250	6	NA	NA	-1	-1024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.160777017442	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGGAGGAGTCATTT	6311	False	NA	-5	True	TATAAA	-14	NA	45846311	45838693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_45838777_45838799_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
ENSMUSG00000011254.17_45838694_45846311_2	chr11	-	1195	7	NNC	ENSMUSG00000011254.17	novel	2250	6	NA	NA	-1	-1024	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	47.160777017442	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGGAGGAGTCATTT	6311	False	NA	-5	True	TATAAA	-14	NA	45846311	45838693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_45838779_45838799_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
ENSMUSG00000011257.20_123191781_123192615_1	chr4	+	416	2	ISM	ENSMUSG00000011257.20	ENSMUST00000146156.2	1146	3	808	10	808	0	3prime_fragment	FALSE	canonical	3	415	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCTGAATTTGATGCCA	835	False	NA	-2	True	AATAAA	-21	NA	123191780	123192615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_123191887_123192305
ENSMUSG00000011267.9_19311212_19314581_1	chr7	+	1341	4	NNC	ENSMUSG00000011267.9	novel	1530	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	113.461692017859	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGACTTTCTTGGGGT	727	False	NA	26	True	AATAAA	-21	NA	19311211	19314581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_19311554_19311741_19311886_19313537_19313970_19314158
ENSMUSG00000011306.8_70495463_70524603_2	chr8	+	2287	14	FSM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	0	394	0	-394	multi-exon	FALSE	canonical	3	384	junction_4	56.2515483021626	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCCAGCATTCCAGTTC	2157	False	NA	9	True	ATTAAA	-14	NA	70495462	70524603	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ENSMUSG00000011306.8_70495699_70524603_1	chr8	+	1934	14	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	0	-394	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	139.368058109819	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCCAGCATTCCAGTTC	2393	False	NA	9	True	ATTAAA	-14	NA	70495698	70524603	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517603_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ENSMUSG00000011306.8_70495699_70524603_2	chr8	+	2039	14	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	0	-394	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	134.331040353177	891	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCCAGCATTCCAGTTC	2393	False	NA	9	True	ATTAAA	-14	NA	70495698	70524603	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511943_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ENSMUSG00000011306.8_70495699_70524997_1	chr8	+	2445	14	FSM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	236	0	0	0	multi-exon	FALSE	canonical	3	384	junction_4	56.2515483021626	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGCTCCTCTGGTCTTC	2393	False	NA	NA	False	GATAAA	-14	NA	70495698	70524997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ENSMUSG00000011382.9_45122971_45138229_1	chr7	-	2763	7	FSM	ENSMUSG00000011382.9	ENSMUST00000011526.7	5323	7	0	2560	0	2083	multi-exon	FALSE	canonical	2	18	junction_4	6.73300329224139	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	45138229	45122970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45124800_45125028_45125177_45128432_45128558_45131212_45131466_45136164_45136329_45137483_45137596_45138097
ENSMUSG00000011837.5_4303094_4306220_1	chr8	+	1150	6	NNC	ENSMUSG00000011837.5	novel	1536	5	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_5	51.909151408976	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGATTCCCCCTTTGAC	NA	False	NA	16	True	AATAAA	-16	NA	4303093	4306220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_4303305_4304281_4304402_4304550_4304620_4304991_4305374_4305480_4305803_4306174
ENSMUSG00000011958.18_69896748_69914715_1	chr9	+	1580	11	FSM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	0	884	0	318	multi-exon	FALSE	canonical	3	26	junction_9	104.017354321286	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAATAATATATATT	NA	False	NA	NA	False	AGTAAA	-25	NA	69896747	69914715	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
ENSMUSG00000011960.13_98449014_98465604_1	chr15	-	1090	6	NNC	ENSMUSG00000011960.13	novel	2015	3	NA	NA	-43	-2481	intron_retention	FALSE	canonical	3	14	junction_1	12.5123938556936	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGAATTTATTTCTA	NA	False	NA	NA	False	ATTAAA	-25	NA	98465604	98449013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_98449521_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
ENSMUSG00000012114.18_17473543_17540766_1	chr16	-	1490	10	ISM	ENSMUSG00000012114.18	ENSMUST00000232236.2	3404	18	45	4458	-2	-409	5prime_fragment	FALSE	canonical	3	173	junction_5	36.5364691814482	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGCTGCTGGGATGCAC	NA	False	NA	NA	False	NA	NA	NA	17540766	17473542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ENSMUSG00000012123.18_133809626_133819815_1	chr4	+	1145	8	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	13863	0	0	0	3prime_fragment	FALSE	canonical	3	103	junction_1	10.7532624380336	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGGTGGTCTCGTCTCT	NA	False	NA	17	True	NA	NA	NA	133809625	133819815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ENSMUSG00000012123.18_133809626_133819815_2	chr4	+	1032	7	NIC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	39.282806530197	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGGTGGTCTCGTCTCT	NA	False	NA	17	True	NA	NA	NA	133809625	133819815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_133809759_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ENSMUSG00000012123.18_133809626_133819815_3	chr4	+	1015	7	NIC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	40.2478432824529	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGGTGGTCTCGTCTCT	NA	False	NA	17	True	NA	NA	NA	133809625	133819815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_133809759_133809885_133809999_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ENSMUSG00000012123.18_133809747_133819815_1	chr4	+	911	7	NIC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	39.282806530197	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGGTGGTCTCGTCTCT	NA	False	NA	17	True	NA	NA	NA	133809746	133819815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_133809759_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ENSMUSG00000012126.17_133845406_133854094_1	chr4	+	995	8	NNC	ENSMUSG00000012126.17	novel	685	3	NA	NA	-5374	7	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	29.7506645441127	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAGGCTCTCCAGAGAG	NA	False	NA	22	True	AATAAA	-22	NA	133845405	133854094	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_133845473_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ENSMUSG00000012126.17_133845410_133854087_1	chr4	+	772	7	NNC	ENSMUSG00000012126.17	novel	685	3	NA	NA	-5370	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	36.6776498701866	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTCACAAGGCTCTC	NA	False	NA	15	True	AATAAA	-15	NA	133845409	133854087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_133845473_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ENSMUSG00000012396.13_122684527_122690585_1	chr6	+	1204	4	FSM	ENSMUSG00000012396.13	ENSMUST00000012540.5	2211	4	0	1007	0	-1007	multi-exon	FALSE	canonical	3	4116	junction_3	205.443152450718	4350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	122684526	122690585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_122684893_122688496_122688763_122689587_122689675_122690100
ENSMUSG00000012396.13_122684527_122691592_1	chr6	+	1251	3	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_2	2270.5	3993	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	18	True	AATAAA	-19	NA	122684526	122691592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_122684893_122688496_122688557_122690767
ENSMUSG00000012396.13_122684675_122691592_1	chr6	+	1103	3	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	148	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2270.5	3260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	18	True	AATAAA	-19	NA	122684674	122691592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_122684893_122688496_122688557_122690767
ENSMUSG00000012405.17_4198726_4200736_1	chr14	+	688	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	97	1137	0	0	multi-exon	FALSE	canonical	3	8735	junction_1	3197.35060462391	132295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198725	4200736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
ENSMUSG00000012422.15_89997040_90237659_1	chr13	+	1472	8	NIC	ENSMUSG00000012422.15	novel	8689	4	NA	NA	-240202	-15121	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATAAACCGATGCGCCCA	NA	False	NA	NA	False	NA	NA	NA	89997039	90237659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237615
ENSMUSG00000012422.15_90237853_90252821_1	chr13	+	513	3	NNC	ENSMUSG00000012422.15	novel	1226	6	NA	NA	0	41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	516.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTGTGTCAGGACTGC	NA	False	NA	9	True	NA	NA	NA	90237852	90252821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_90237903_90246480_90246591_90252468
ENSMUSG00000012422.15_90237853_90252821_2	chr13	+	523	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	611	7555	0	41	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	2627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTGTGTCAGGACTGC	NA	False	NA	9	True	NA	NA	NA	90237852	90252821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ENSMUSG00000012422.15_90237853_90253045_1	chr13	+	737	3	NNC	ENSMUSG00000012422.15	novel	1226	6	NA	NA	0	265	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	516.5	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTACCTCTATTCTTG	NA	False	NA	5	True	TTTAAA	-17	NA	90237852	90253045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_90237903_90246480_90246591_90252468
ENSMUSG00000012422.15_90237853_90253045_2	chr13	+	747	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	611	7331	0	265	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	3632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTACCTCTATTCTTG	NA	False	NA	5	True	TTTAAA	-17	NA	90237852	90253045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ENSMUSG00000012422.15_90237853_90253574_1	chr13	+	1276	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	611	6802	0	794	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	4240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATAGCATTTATTAATTA	NA	False	NA	NA	False	ATTAAA	-17	NA	90237852	90253574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ENSMUSG00000012443.5_37364851_37409123_1	chr19	+	3635	22	FSM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	0	1184	0	-1184	multi-exon	TRUE	canonical	3	280	junction_17	34.0452546631592	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTCCAGGTTTAGAC	NA	False	NA	14	True	ATTAAA	-18	NA	37364850	37409123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ENSMUSG00000012443.5_37364851_37409626_1	chr19	+	4138	22	FSM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	0	681	0	-681	multi-exon	FALSE	canonical	3	280	junction_17	34.0452546631592	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTCTGTTGAAATATTA	NA	False	NA	4	True	AATAAA	-15	NA	37364850	37409626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ENSMUSG00000012535.15_29540826_29609615_1	chr6	-	3980	23	FSM	ENSMUSG00000012535.15	ENSMUST00000012679.15	4251	23	271	0	-3	0	multi-exon	FALSE	canonical	3	521	junction_17	54.5301683125804	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	10	True	NA	-2	True	TTTAAA	-5	NA	29609615	29540825	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ENSMUSG00000012535.15_29541145_29609615_1	chr6	-	3661	23	FSM	ENSMUSG00000012535.15	ENSMUST00000012679.15	4251	23	271	319	-3	-164	multi-exon	FALSE	canonical	3	521	junction_17	54.5301683125804	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGGAGAAAAGCCAAAACT	10	True	NA	NA	False	NA	NA	NA	29609615	29541144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ENSMUSG00000012777.15_43896211_43901739_1	chr7	-	2048	7	NIC	ENSMUSG00000012777.15	novel	1634	11	NA	NA	4890	5361	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGCCACCGCCGCGTGTC	NA	False	NA	NA	False	NA	NA	NA	43901739	43896210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_43896233_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000012777.15_43896211_43901739_4	chr7	-	2001	6	NNC	ENSMUSG00000012777.15	novel	1634	11	NA	NA	4890	5361	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	444	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGCCACCGCCGCGTGTC	NA	False	NA	NA	False	NA	NA	NA	43901739	43896210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_43896248_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000012777.15_43896211_43901739_5	chr7	-	3341	5	NIC	ENSMUSG00000012777.15	novel	1634	11	NA	NA	4890	5361	intron_retention	FALSE	non_canonical	0	0	junction_1	0	514	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGCCACCGCCGCGTGTC	NA	False	NA	NA	False	NA	NA	NA	43901739	43896210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000012848.16_12656245_12660613_1	chr7	+	695	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_3	6942.55032678914	9179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_12656316_12656899_12657009_12659318_12659529_12659701_12659793_12660322_12660422_12660498
ENSMUSG00000012848.16_12656245_12660613_2	chr7	+	738	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6963.99639862055	111246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_12656316_12656899_12657009_12659318_12659534_12659663_12659793_12660322_12660422_12660498
ENSMUSG00000012848.16_12656245_12660613_3	chr7	+	719	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6837.18021994448	74242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_12656302_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ENSMUSG00000012848.16_12656245_12660613_4	chr7	+	715	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6896.10961049779	42984	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_12656316_12656899_12657009_12659336_12659529_12659663_12659793_12660322_12660422_12660498
ENSMUSG00000013089.16_22200066_22230497_1	chr16	-	3152	7	ISM	ENSMUSG00000013089.16	ENSMUST00000168774.8	3773	13	24767	0	-9918	0	3prime_fragment	FALSE	canonical	3	940	junction_4	61.8456860976486	2169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGCATTCCTGCAACCTG	NA	False	NA	-20	True	AATAAA	-15	NA	22230497	22200065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382
ENSMUSG00000013089.16_22200066_22258368_1	chr16	-	3867	13	FSM	ENSMUSG00000013089.16	ENSMUST00000079601.13	3975	13	101	7	-2	0	multi-exon	FALSE	canonical	3	174	junction_9	424.638105724549	2322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGCATTCCTGCAACCTG	7587	False	NA	-20	True	AATAAA	-15	NA	22258368	22200065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22254626_22254678_22254769_22254818_22254950_22255039_22255187_22255311_22258266
ENSMUSG00000013089.16_22201855_22230497_1	chr16	-	1363	7	ISM	ENSMUSG00000013089.16	ENSMUST00000168774.8	3773	13	24767	1789	-9918	474	3prime_fragment	FALSE	canonical	3	940	junction_4	61.8456860976486	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTGACTTGCACAATTC	NA	False	NA	NA	False	ACTAAA	-17	NA	22230497	22201854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382
ENSMUSG00000013150.16_106442742_106485239_1	chr8	-	2039	3	FSM	ENSMUSG00000013150.16	ENSMUST00000013294.16	4352	3	57	2256	-11	1307	multi-exon	FALSE	canonical	3	21	junction_1	4	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATGGTGTGTGGTCGTT	NA	False	NA	NA	False	AGTAAA	-20	NA	106485239	106442741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106444283_106454619_106454964_106485085
ENSMUSG00000013155.11_106430283_106434777_1	chr8	-	1368	8	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_7	49.3529562003563	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGTTCCATAGGAGC	NA	False	NA	-14	True	ATTAAA	-15	NA	106434777	106430282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106434675
ENSMUSG00000013158.7_106430283_106434842_2	chr8	+	1320	8	NNC	ENSMUSG00000013158.7	novel	575	3	NA	NA	-4004	-1400	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAAATGGCTTCCTGAGG	NA	False	NA	NA	False	NA	NA	NA	106430282	106434842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106434788
ENSMUSG00000013158.7_106430283_106434842_3	chr8	+	1306	8	NNC	ENSMUSG00000013158.7	novel	575	3	NA	NA	-4004	-1400	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAAATGGCTTCCTGAGG	NA	False	NA	NA	False	NA	NA	NA	106430282	106434842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106434802
ENSMUSG00000013160.8_106251097_106292679_1	chr8	-	1623	8	NNC	ENSMUSG00000013160.8	novel	1629	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	213.058581577165	1622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGTCTGTCTGCTCC	NA	False	NA	-10	True	AATAAA	-18	NA	106292679	106251096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106255886_106257446_106257620_106265952_106266125_106292414
ENSMUSG00000013275.10_131755715_131774555_1	chr1	+	2649	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	0	2048	0	188	multi-exon	FALSE	canonical	3	130	junction_4	13.4402380931292	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTACACTCCCATGCCTTT	5202	False	NA	NA	False	NA	NA	NA	131755714	131774555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ENSMUSG00000013275.10_131755905_131776603_1	chr1	+	4507	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	190	0	190	0	multi-exon	FALSE	canonical	3	130	junction_4	13.4402380931292	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTATCCCTGTGTGTCT	5392	False	NA	23	True	AATAAA	-20	NA	131755904	131776603	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ENSMUSG00000013415.10_95853955_95873437_1	chr11	-	1979	14	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	0	307	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	177.836138924832	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTTTGTTTCTTAACC	NA	False	NA	NA	False	AATAAA	-30	NA	95873437	95853954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
ENSMUSG00000013415.10_95853955_95896770_1	chr11	-	2416	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	-4	5966	-4	307	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTTTGTTTCTTAACC	NA	False	NA	NA	False	AATAAA	-30	NA	95896770	95853954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ENSMUSG00000013495.16_108777698_108792982_1	chr5	+	1579	10	ISM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	-177	1555	0	0	5prime_fragment	FALSE	canonical	3	25	junction_1	34.906223577529	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACACTTTTCCTGATAC	NA	False	NA	28	True	ATTAAA	-36	NA	108777697	108792982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
ENSMUSG00000013495.16_108777698_108794537_1	chr5	+	1845	11	FSM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	0	2111	0	0	multi-exon	FALSE	canonical	3	71	junction_10	21.559220765139	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAGTGAAGGGTTTCA	NA	False	NA	21	True	NA	NA	NA	108777697	108794537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ENSMUSG00000013495.16_108777698_108795129_1	chr5	+	2437	11	FSM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	0	1519	0	0	multi-exon	FALSE	canonical	3	71	junction_10	21.559220765139	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTTTTGAACATTGAAAA	NA	False	NA	NA	False	AATAAA	-25	NA	108777697	108795129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ENSMUSG00000013523.14_170189068_170191715_1	chr2	-	1312	3	FSM	ENSMUSG00000013523.14	ENSMUST00000152461.2	371	3	0	-941	0	0	multi-exon	FALSE	canonical	3	30	junction_2	23.5	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGAGGTGGTTTTTT	4146	False	NA	-3	True	AATAAA	-18	NA	170191715	170189067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_170190069_170191101_170191384_170191686
ENSMUSG00000013523.14_170189068_170199033_1	chr2	-	1485	4	FSM	ENSMUSG00000013523.14	ENSMUST00000133673.8	688	4	0	-797	0	0	multi-exon	FALSE	canonical	3	7	junction_2	32.9983164553722	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGAGGTGGTTTTTT	NA	False	NA	-3	True	AATAAA	-18	NA	170199033	170189067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_170190069_170191101_170191384_170198167_170198234_170198897
ENSMUSG00000013539.15_18118689_18165947_1	chr16	-	1689	9	NIC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	76.5371641753207	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGGCTTTTTCTAA	NA	False	NA	-4	True	AATAAA	-16	NA	18165947	18118688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18165734
ENSMUSG00000013593.13_171062422_171074691_1	chr1	-	1206	12	NNC	ENSMUSG00000013593.13	novel	1623	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	416.65896632003	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTAATGTGTCTTTCTT	NA	False	NA	-1	True	ATTAAA	-28	NA	171074691	171062421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278_171066324_171068668_171068707_171073659_171073767_171074562
ENSMUSG00000013622.16_31205656_31211967_2	chr5	+	1289	7	FSM	ENSMUSG00000013622.16	ENSMUST00000013766.13	966	7	-323	0	0	0	multi-exon	FALSE	canonical	3	250	junction_6	22.1108319357027	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTACCTGTGCGTG	585	False	NA	12	True	AATAAA	-25	NA	31205655	31211967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31206101_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
ENSMUSG00000013622.16_31206375_31211967_1	chr5	+	878	7	FSM	ENSMUSG00000013622.16	ENSMUST00000201136.2	894	7	246	-230	246	0	multi-exon	FALSE	canonical	3	6	junction_1	108.191830663051	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTACCTGTGCGTG	1304	False	NA	12	True	AATAAA	-25	NA	31206374	31211967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31206409_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
ENSMUSG00000013662.7_32649963_32689721_1	chr19	-	2836	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	10	925	-1	259	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	1390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATTACAGCACTGAATT	NA	False	NA	NA	False	ATTAAA	-15	NA	32689721	32649962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ENSMUSG00000013662.7_32650222_32689721_1	chr19	-	2577	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	10	1184	-1	0	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTTTCCCCACTTAGT	NA	False	NA	-18	True	AATAAA	-17	NA	32689721	32650221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ENSMUSG00000013662.7_32650785_32689721_1	chr19	-	2014	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	10	1747	-1	-563	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGATAGTTTATATAAA	NA	False	NA	NA	False	NA	NA	NA	32689721	32650784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ENSMUSG00000013698.13_172025020_172034278_1	chr1	-	1683	4	FSM	ENSMUSG00000013698.13	ENSMUST00000013842.12	2501	4	93	725	-14	-725	multi-exon	FALSE	canonical	3	108	junction_1	8.37987005998436	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTTTTTTGTGGTTTTT	NA	False	NA	-6	True	ATTAAA	-17	NA	172034278	172025019	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_172026258_172026677_172026834_172027974_172028149_172034163
ENSMUSG00000013701.14_31902248_31923840_1	chr14	-	1029	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	15	129	-4	0	multi-exon	FALSE	canonical	3	3717	junction_4	299.373048590253	6620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCTCCAAATTCAGGCCA	NA	False	NA	NA	False	NA	NA	NA	31923840	31902247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ENSMUSG00000013701.14_31902464_31923840_1	chr14	-	813	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	15	345	-4	0	multi-exon	FALSE	canonical	3	3717	junction_4	299.373048590253	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTAATAAGCCAGTCTGG	NA	False	NA	NA	False	NA	NA	NA	31923840	31902463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ENSMUSG00000013736.17_106746102_106759435_2	chr6	+	2066	9	NNC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_8	349.693794626099	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCGTTATTTCTGT	NA	False	NA	12	True	AATAAA	-21	NA	106746101	106759435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_106746153_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756252_106758607
ENSMUSG00000013736.17_106746174_106759435_1	chr6	+	2271	9	NNC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	7	junction_1	302.286701659203	1464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCGTTATTTCTGT	NA	False	NA	12	True	AATAAA	-21	NA	106746173	106759435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_106746253_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ENSMUSG00000013766.12_35293189_35297780_1	chr17	+	1061	4	NNC	ENSMUSG00000013766.12	novel	1142	3	NA	NA	-2689	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_1	205.819230286083	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGAGAGCTGTCTGTG	NA	False	NA	20	True	NA	NA	NA	35293188	35297780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_35293306_35296110_35296183_35296812_35296939_35297034
ENSMUSG00000013766.12_35295878_35297780_1	chr17	+	974	4	FSM	ENSMUSG00000013766.12	ENSMUST00000172494.8	464	4	0	-510	0	0	multi-exon	FALSE	canonical	0	0	junction_1	226.144987907217	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGAGAGCTGTCTGTG	NA	False	NA	20	True	NA	NA	NA	35295877	35297780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35295936_35296110_35296183_35296812_35296911_35297034
ENSMUSG00000013766.12_35295878_35297780_2	chr17	+	1002	4	NIC	ENSMUSG00000013766.12	novel	464	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	215.629826838084	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGAGAGCTGTCTGTG	NA	False	NA	20	True	NA	NA	NA	35295877	35297780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_35295936_35296110_35296183_35296812_35296939_35297034
ENSMUSG00000013787.16_35130225_35133027_1	chr17	+	984	5	ISM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	12278	0	274	0	3prime_fragment	FALSE	canonical	3	414	junction_3	11.4972822875669	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	1795	False	NA	19	True	AATAAA	-20	NA	35130224	35133027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ENSMUSG00000013928.14_29939563_29979844_1	chr7	+	4733	33	NIC	ENSMUSG00000013928.14	novel	1182	4	NA	NA	-39956	-1476	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCGCCACCGCCCATTGG	NA	False	NA	NA	False	NA	NA	NA	29939562	29979844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ENSMUSG00000013973.13_171157178_171169186_1	chr1	+	1551	6	NIC	ENSMUSG00000013973.13	novel	849	5	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	78.1756995491566	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGACTCTGAAGTGTAT	1657	False	NA	4	True	AGTAAA	-15	NA	171157177	171169186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_171157261_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUSG00000013973.13_171157178_171169899_1	chr1	+	2264	6	NIC	ENSMUSG00000013973.13	novel	849	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	78.1756995491566	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACTTTTCTGAAACTGA	1657	False	NA	NA	False	AATAAA	-17	NA	171157177	171169899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_171157261_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUSG00000013973.13_171169812_171173213_1	chr1	+	1902	6	NIC	ENSMUSG00000013973.13	novel	2563	6	NA	NA	4277	3314	intron_retention	FALSE	non_canonical	0	0	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAACCCCCCGGCCGGATG	9164	False	NA	NA	False	NA	NA	NA	171169811	171173213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481
ENSMUSG00000013997.11_171156976_171169186_1	chr1	-	1587	6	NIC	ENSMUSG00000013997.11	novel	3041	7	NA	NA	2849	8600	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGGCGTGGGGGAGGGGA	4906	False	NA	NA	False	NA	NA	NA	171169186	171156975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_171157095_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUSG00000013997.11_171156976_171169186_2	chr1	-	1554	5	NIC	ENSMUSG00000013997.11	novel	2932	5	NA	NA	2849	8600	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGGCGTGGGGGAGGGGA	4906	False	NA	NA	False	NA	NA	NA	171169186	171156975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_171157095_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUSG00000013997.11_171156976_171169259_1	chr1	-	1627	5	NIC	ENSMUSG00000013997.11	novel	2932	5	NA	NA	2776	8600	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGGCGTGGGGGAGGGGA	4833	False	NA	NA	False	NA	NA	NA	171169259	171156975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_171157095_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUSG00000013997.11_171156976_171169259_2	chr1	-	1660	6	NIC	ENSMUSG00000013997.11	novel	3041	7	NA	NA	2776	8600	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGGCGTGGGGGAGGGGA	4833	False	NA	NA	False	NA	NA	NA	171169259	171156975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_171157095_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUSG00000013997.11_171156976_171169899_1	chr1	-	2267	5	NIC	ENSMUSG00000013997.11	novel	2932	5	NA	NA	2136	8600	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGGCGTGGGGGAGGGGA	4193	False	NA	NA	False	NA	NA	NA	171169899	171156975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_171157095_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUSG00000013997.11_171156976_171169899_2	chr1	-	2300	6	NIC	ENSMUSG00000013997.11	novel	3041	7	NA	NA	2136	8600	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGGCGTGGGGGAGGGGA	4193	False	NA	NA	False	NA	NA	NA	171169899	171156975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_171157095_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUSG00000013997.11_171157178_171169259_1	chr1	-	1591	5	NIC	ENSMUSG00000013997.11	novel	2932	5	NA	NA	2776	8398	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTTGGCGGCCCCGCC	4833	False	NA	NA	False	NA	NA	NA	171169259	171157177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_171157261_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUSG00000013997.11_171168139_171173213_1	chr1	-	3008	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	0	-1673	0	0	multi-exon	TRUE	canonical	3	74	junction_6	27.0025718939676	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTGACTTGGTTCA	879	False	NA	2	True	ATTAAA	-23	NA	171173213	171168138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173135
ENSMUSG00000013997.11_171169812_171173213_1	chr1	-	1367	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111289.8	3041	7	1	1673	0	0	multi-exon	FALSE	canonical	3	17	junction_6	46.1904270986484	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	879	False	NA	-10	True	AATATA	-8	NA	171173213	171169811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173103
ENSMUSG00000013997.11_171169812_171173213_2	chr1	-	1712	7	NIC	ENSMUSG00000013997.11	novel	1335	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_6	48.6646689087679	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	879	False	NA	-10	True	AATATA	-8	NA	171173213	171169811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171172758
ENSMUSG00000014074.18_32117870_32119724_1	chr16	+	1259	2	NNC	ENSMUSG00000014074.18	novel	3932	6	NA	NA	21591	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGCTTTTTCCACAT	3197	False	NA	13	True	AATAAA	-14	NA	32117869	32119724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_32118585_32119180
ENSMUSG00000014075.16_32238520_32247716_1	chr16	+	637	5	FSM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	0	201	0	-197	multi-exon	FALSE	canonical	3	248	junction_3	20.9568008054665	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTAAGTTGTATATGTT	NA	False	NA	17	True	AATAAA	-28	NA	32238519	32247716	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32238746_32241637_32241772_32244058_32244129_32245675_32245740_32247573
ENSMUSG00000014075.16_32238613_32247716_1	chr16	+	474	4	FSM	ENSMUSG00000014075.16	ENSMUST00000080316.8	720	4	49	197	0	-197	multi-exon	FALSE	canonical	3	12	junction_2	127.027556065603	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTAAGTTGTATATGTT	NA	False	NA	17	True	AATAAA	-28	NA	32238612	32247716	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32238746_32241637_32241772_32245675_32245740_32247573
ENSMUSG00000014077.14_119378202_119417167_1	chr2	+	2244	7	FSM	ENSMUSG00000014077.14	ENSMUST00000014221.13	2609	7	24	341	0	-329	multi-exon	FALSE	canonical	3	147	junction_2	25.1197133741609	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAAACACTGCAAAGA	NA	False	NA	NA	False	AATAAA	-18	NA	119378201	119417167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_119378399_119391211_119391285_119397130_119397212_119402248_119402377_119411175_119411238_119415010_119415134_119415587
ENSMUSG00000014077.14_119378293_119417508_1	chr2	+	2366	6	NIC	ENSMUSG00000014077.14	novel	2609	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	74.6886872290576	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGAGTTTTACCCGG	NA	False	NA	NA	False	AATAAA	-25	NA	119378292	119417508	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_119378399_119391211_119391285_119397130_119397212_119411175_119411238_119415010_119415134_119415587
ENSMUSG00000014177.11_62770281_62786012_1	chr11	+	1837	7	NNC	ENSMUSG00000014177.11	novel	1784	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	179.477637108979	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGTGTGGTCCCATTT	9241	False	NA	11	True	TATAAA	-19	NA	62770280	62786012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_62770422_62772762_62772846_62774400_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ENSMUSG00000014177.11_62770316_62786011_1	chr11	+	1870	7	NIC	ENSMUSG00000014177.11	novel	1784	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	171.994831963702	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGATGTGTGGTCCCATT	9276	False	NA	10	True	TATAAA	-18	NA	62770315	62786011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_62770543_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ENSMUSG00000014177.11_62770391_62786012_1	chr11	+	1675	7	FSM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	110	-1	-49	1	multi-exon	FALSE	canonical	3	376	junction_1	45.7666181111663	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGTGTGGTCCCATTT	9351	False	NA	11	True	TATAAA	-19	NA	62770390	62786012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ENSMUSG00000014177.11_62770391_62786012_2	chr11	+	1727	7	NNC	ENSMUSG00000014177.11	novel	1784	7	NA	NA	-49	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	179.477637108979	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGTGTGGTCCCATTT	9351	False	NA	11	True	TATAAA	-19	NA	62770390	62786012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_62770422_62772762_62772846_62774400_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ENSMUSG00000014195.17_100473644_100510446_1	chr11	-	1770	14	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	737.993417330852	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5930	False	NA	-21	True	AATAAA	-15	NA	100510446	100473643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482249_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUSG00000014195.17_100473644_100510446_2	chr11	-	1777	14	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	731.82835799259	2314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5930	False	NA	-21	True	AATAAA	-15	NA	100510446	100473643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480811_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUSG00000014195.17_100473644_100510446_3	chr11	-	1886	15	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	922.532807336544	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5930	False	NA	-21	True	AATAAA	-15	NA	100510446	100473643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480500_100480605_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUSG00000014195.17_100473644_100510446_4	chr11	-	1869	15	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_11	939.864083204566	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5930	False	NA	-21	True	AATAAA	-15	NA	100510446	100473643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100489828_100489916_100490010_100490136_100492553_100492643_100510353
ENSMUSG00000014195.17_100473644_100510446_5	chr11	-	1777	14	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	24	junction_13	721.29422633676	3490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5930	False	NA	-21	True	AATAAA	-15	NA	100510446	100473643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492638_100510353
ENSMUSG00000014195.17_100473644_100510446_6	chr11	-	1777	14	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	737.993417330852	2426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5930	False	NA	-21	True	AATAAA	-15	NA	100510446	100473643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482242_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUSG00000014226.11_160030491_160040385_1	chr1	-	1478	6	NNC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	-10	-554	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1818.0095709319	12485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCTGCAATCTGTT	7356	False	NA	-5	True	AATAAA	-20	NA	160040385	160030490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_160031294_160032537_160032630_160033665_160033766_160034182_160034280_160035948_160036166_160040216
ENSMUSG00000014226.11_160030733_160040385_1	chr1	-	1240	6	NNC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	-10	-796	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	1817.21353725972	4501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAATTTGTGCAAAGTTA	7356	False	NA	-24	True	AATAAA	-20	NA	160040385	160030732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_160031294_160032537_160032630_160033661_160033766_160034182_160034280_160035948_160036166_160040216
ENSMUSG00000014226.11_160030733_160040385_2	chr1	-	1236	6	NNC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	-10	-796	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1818.0095709319	1815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAATTTGTGCAAAGTTA	7356	False	NA	-24	True	AATAAA	-20	NA	160040385	160030732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_160031294_160032537_160032630_160033665_160033766_160034182_160034280_160035948_160036166_160040216
ENSMUSG00000014226.11_160030733_160040385_3	chr1	-	1242	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	60	796	-10	-796	multi-exon	FALSE	canonical	3	4235	junction_5	193.777810907235	4774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAATTTGTGCAAAGTTA	7356	False	NA	-24	True	AATAAA	-20	NA	160040385	160030732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
ENSMUSG00000014226.11_160030936_160040385_1	chr1	-	1039	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	60	999	-10	-999	multi-exon	FALSE	canonical	3	4235	junction_5	193.777810907235	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCATTAGCACCCCAGA	7356	False	NA	-17	True	AATAAA	-19	NA	160040385	160030935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
ENSMUSG00000014243.6_62158050_62172201_1	chr11	-	607	3	NIC	ENSMUSG00000014243.6	novel	732	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_2	132	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATCAAGTTATTGAAGT	NA	False	NA	-15	True	AATAAA	-25	NA	62172201	62158049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_62158433_62159529_62159635_62172082
ENSMUSG00000014245.9_62402517_62404730_1	chr11	+	1582	2	ISM	ENSMUSG00000014245.9	ENSMUST00000014389.6	2174	7	53231	513	53083	-513	3prime_fragment	FALSE	canonical	3	316	junction_1	0	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGGGCCCACACCTTT	NA	False	NA	25	True	AATAAA	-29	NA	62402516	62404730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_62403098_62403729
ENSMUSG00000014294.5_36875514_36877610_1	chr18	-	443	3	FSM	ENSMUSG00000014294.5	ENSMUST00000014438.5	572	3	0	129	0	-129	multi-exon	FALSE	canonical	3	2929	junction_2	68.5	14435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCAGAATGTCCTCTT	NA	False	NA	-21	True	TATAAA	-18	NA	36877610	36875513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_36875712_36877233_36877341_36877472
ENSMUSG00000014294.5_36875514_36877610_2	chr18	-	438	3	NNC	ENSMUSG00000014294.5	novel	572	3	NA	NA	0	-129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1533	14378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCAGAATGTCCTCTT	NA	False	NA	-21	True	TATAAA	-18	NA	36877610	36875513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_36875712_36877233_36877341_36877477
ENSMUSG00000014294.5_36875514_36877610_3	chr18	-	435	3	NNC	ENSMUSG00000014294.5	novel	572	3	NA	NA	0	-129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1464.5	13626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCAGAATGTCCTCTT	NA	False	NA	-21	True	TATAAA	-18	NA	36877610	36875513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_36875700_36877229_36877341_36877472
ENSMUSG00000014301.14_4434328_4442810_1	chr16	-	548	5	NNC	ENSMUSG00000014301.14	novel	596	5	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	544.721947419048	6905	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCCTGTTTGAGAAGGT	NA	False	NA	-15	True	AATAAA	-28	NA	4442810	4434327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4435862_4442714
ENSMUSG00000014301.14_4434328_4442810_2	chr16	-	469	4	NIC	ENSMUSG00000014301.14	novel	596	5	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_3	586.024648704207	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCCTGTTTGAGAAGGT	NA	False	NA	-15	True	AATAAA	-28	NA	4442810	4434327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_4434498_4434676_4434743_4434989_4435127_4442714
ENSMUSG00000014303.14_4434328_4442810_1	chr16	+	701	5	Genic_Genomic	ENSMUSG00000014303.14	novel	711	4	NA	NA	4836	22	multi-exon	FALSE	non_canonical	0	0	junction_1	0	941	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGCGCGTGCGCAAGGA	NA	False	NA	NA	False	NA	NA	NA	4434327	4442810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_4434498_4434676_4434743_4434989_4435127_4435782_4436015_4442714
ENSMUSG00000014303.14_4434328_4442810_2	chr16	+	547	5	Genic_Genomic	ENSMUSG00000014303.14	novel	711	4	NA	NA	4836	22	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGCGCGTGCGCAAGGA	NA	False	NA	NA	False	NA	NA	NA	4434327	4442810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_4434498_4434683_4434743_4434989_4435127_4435782_4435868_4442714
ENSMUSG00000014355.11_128495087_128529311_1	chr2	-	2967	22	ISM	ENSMUSG00000014355.11	ENSMUST00000110333.2	4214	28	-15	11090	0	4554	5prime_fragment	FALSE	canonical	3	297	junction_16	32.2554289757972	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGTTAAATGTTTGC	NA	False	NA	NA	False	NA	NA	NA	128529311	128495086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ENSMUSG00000014402.16_46539038_46569639_1	chr7	-	1530	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	78	341	0	-263	multi-exon	FALSE	canonical	3	992	junction_2	86.0289931030289	2126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGTTCAGTATTCTGT	NA	False	NA	50	True	AATAAA	-23	NA	46569639	46539037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ENSMUSG00000014402.16_46539122_46569685_1	chr7	-	1333	8	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	0	212	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	409.120460280842	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTTCTTGGACTT	NA	False	NA	-34	True	AATAAA	-14	NA	46569685	46539121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ENSMUSG00000014402.16_46539122_46569685_2	chr7	-	1371	10	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	0	212	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_2	371.517940679738	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTTCTTGGACTT	NA	False	NA	-34	True	AATAAA	-14	NA	46569685	46539121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_46539453_46540669_46540789_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ENSMUSG00000014402.16_46539122_46569685_3	chr7	-	1492	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	32	425	0	212	multi-exon	FALSE	canonical	3	992	junction_2	86.0289931030289	2145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTTCTTGGACTT	NA	False	NA	-34	True	AATAAA	-14	NA	46569685	46539121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ENSMUSG00000014498.10_128237264_128245656_1	chr10	+	1430	6	Genic_Genomic	ENSMUSG00000014498.10	novel	670	6	NA	NA	12105	1083	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGGGCTGGCTGCCGCCGG	4931	False	NA	NA	False	NA	NA	NA	128237263	128245656	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr10_+_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115
ENSMUSG00000014504.17_34464198_34468427_1	chr18	+	1181	4	ISM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	0	1225	0	-971	5prime_fragment	FALSE	canonical	3	833	junction_3	58.1969835033474	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATATGAAGTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	34464197	34468427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509
ENSMUSG00000014504.17_34464198_34469398_1	chr18	+	622	5	FSM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	0	254	0	0	multi-exon	FALSE	canonical	3	833	junction_3	511.998291012773	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATCAACAGTTAACAATGA	NA	False	NA	NA	False	NA	NA	NA	34464197	34469398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509_34467622_34469151
ENSMUSG00000014504.17_34464198_34469607_1	chr18	+	826	5	NNC	ENSMUSG00000014504.17	novel	876	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	398.253923395615	3719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTTCATCTTTAAGT	NA	False	NA	-41	True	AATAAA	-13	NA	34464197	34469607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509_34467622_34469156
ENSMUSG00000014504.17_34464198_34469607_2	chr18	+	759	4	FSM	ENSMUSG00000014504.17	ENSMUST00000119329.8	613	4	-13	-133	0	1	multi-exon	FALSE	canonical	3	7	junction_2	851.206594585983	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTTCATCTTTAAGT	NA	False	NA	-41	True	AATAAA	-13	NA	34464197	34469607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_34464313_34464802_34464879_34467509_34467622_34469151
ENSMUSG00000014504.17_34464198_34469607_3	chr18	+	826	5	NNC	ENSMUSG00000014504.17	novel	876	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	398.683458397762	3895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTTCATCTTTAAGT	NA	False	NA	-41	True	AATAAA	-13	NA	34464197	34469607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509_34467617_34469151
ENSMUSG00000014550.15_92164428_92191851_1	chr6	-	4544	12	FSM	ENSMUSG00000014550.15	ENSMUST00000014694.11	5334	12	55	735	-21	-735	multi-exon	FALSE	canonical	3	92	junction_10	18.3307536376882	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTAGTGACTTATTAAA	NA	False	NA	NA	False	NA	NA	NA	92191851	92164427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ENSMUSG00000014551.9_92151819_92160975_1	chr6	-	721	4	FSM	ENSMUSG00000014551.9	ENSMUST00000140438.2	6073	4	39	5313	-23	0	multi-exon	FALSE	canonical	3	811	junction_2	13.9124245031395	4079	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATAGTAAGTGTGGCCT	NA	False	NA	-9	True	AATAAA	-16	NA	92160975	92151818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_92152190_92152689_92152778_92155690_92155798_92160820
ENSMUSG00000014554.14_83457199_83483889_1	chr6	-	1106	8	NIC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	8	junction_4	92.3157845746471	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGTTCGTTTATTTC	NA	False	NA	-3	True	AATAAA	-23	NA	83483889	83457198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_83457419_83457824_83457925_83458328_83458445_83458759_83458821_83463965_83464114_83467402_83467591_83473667_83473781_83483729
ENSMUSG00000014554.14_83457199_83483889_2	chr6	-	893	7	NNC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	78.5443965042843	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGTTCGTTTATTTC	NA	False	NA	-3	True	AATAAA	-23	NA	83483889	83457198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464023_83467463_83467591_83473667_83473781_83483729
ENSMUSG00000014606.15_70535022_70538305_1	chr11	-	1609	8	NIC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	260.48878702022	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTAAAGTCGTAACT	NA	False	NA	0	True	ATTAAA	-28	NA	70538305	70535021	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70538116
ENSMUSG00000014606.15_70535149_70538305_1	chr11	-	1482	8	NIC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	0	-127	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	260.48878702022	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAATCTGGATAGTCTT	NA	False	NA	-7	True	AATAAA	-18	NA	70538305	70535148	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70538116
ENSMUSG00000014606.15_70538113_70542247_2	chr11	-	1910	8	NIC	ENSMUSG00000014606.15	novel	770	6	NA	NA	-3942	-1372	intron_retention	FALSE	non_canonical	0	0	junction_1	0	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAAGTATCGCGAGAGT	NA	False	NA	NA	False	NA	NA	NA	70542247	70538112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589
ENSMUSG00000014606.15_70538113_70542247_3	chr11	-	1878	9	NNC	ENSMUSG00000014606.15	novel	770	6	NA	NA	-3942	-1372	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAAGTATCGCGAGAGT	NA	False	NA	NA	False	NA	NA	NA	70542247	70538112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540692_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUSG00000014606.15_70538113_70542247_4	chr11	-	1406	10	NIC	ENSMUSG00000014606.15	novel	770	6	NA	NA	-3942	-1372	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAAGTATCGCGAGAGT	NA	False	NA	NA	False	NA	NA	NA	70542247	70538112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_70538140_70538566_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUSG00000014633.16_117616018_117648178_1	chr8	-	849	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	16	594	0	0	multi-exon	FALSE	canonical	3	303	junction_2	17.3076733143296	1698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	117648178	117616017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
ENSMUSG00000014633.16_117616257_117648178_1	chr8	-	449	4	NNC	ENSMUSG00000014633.16	novel	793	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	149.010812433938	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCCCTTTCTTTAAC	NA	False	NA	-5	True	AATAAA	-15	NA	117648178	117616256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_117616438_117620826_117620899_117637866_117637974_117648089
ENSMUSG00000014633.16_117616257_117648178_2	chr8	-	610	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	16	833	0	0	multi-exon	FALSE	canonical	3	303	junction_2	17.3076733143296	1587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCCCTTTCTTTAAC	NA	False	NA	-5	True	AATAAA	-15	NA	117648178	117616256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
ENSMUSG00000014668.16_110283726_110319838_1	chr5	+	3049	17	NIC	ENSMUSG00000014668.16	novel	3146	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	81.0771237773023	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283725	110319838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_110283801_110283916_110284061_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ENSMUSG00000014668.16_110283726_110319838_2	chr5	+	3127	18	NIC	ENSMUSG00000014668.16	novel	3146	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	73.7381038437897	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283725	110319838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_110283801_110283916_110284061_110288241_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ENSMUSG00000014763.9_15616510_15652302_1	chr17	+	2976	11	FSM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	46	1398	0	-1398	multi-exon	TRUE	canonical	2	12	junction_2	12.6526677028997	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTAGTCTTTGAACTCA	NA	False	NA	7	True	ATTAAA	-21	NA	15616509	15652302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_15616823_15622006_15623392_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
ENSMUSG00000014767.18_15741837_15747563_2	chr17	+	1036	7	NNC	ENSMUSG00000014767.18	novel	12794	8	NA	NA	6092	-1078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGAGGGCGGTCACGTGT	6054	False	NA	NA	False	NA	NA	NA	15741836	15747563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747252_15747365_15747448
ENSMUSG00000014767.18_15741837_15747563_3	chr17	+	1032	7	NNC	ENSMUSG00000014767.18	novel	12794	8	NA	NA	6092	-1078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGAGGGCGGTCACGTGT	6054	False	NA	NA	False	NA	NA	NA	15741836	15747563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747252_15747366_15747453
ENSMUSG00000014767.18_15741837_15747563_4	chr17	+	1035	7	NNC	ENSMUSG00000014767.18	novel	12794	8	NA	NA	6092	-1078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGAGGGCGGTCACGTGT	6054	False	NA	NA	False	NA	NA	NA	15741836	15747563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747252_15747364_15747448
ENSMUSG00000014769.11_15695981_15718560_1	chr17	-	1055	6	NNC	ENSMUSG00000014769.11	novel	1758	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1969.29053214603	22836	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTTTTTCTTTATCTG	NA	False	NA	-21	True	NA	NA	NA	15718560	15695980	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_15696468_15697576_15697679_15710417_15710548_15713359_15713442_15714677_15714786_15718414
ENSMUSG00000014769.11_15695981_15718560_2	chr17	-	1059	6	NNC	ENSMUSG00000014769.11	novel	1758	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2027.92287821801	12996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTTTTTCTTTATCTG	NA	False	NA	-21	True	NA	NA	NA	15718560	15695980	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713437_15714673_15714786_15718414
ENSMUSG00000014769.11_15696221_15718560_2	chr17	-	819	6	NNC	ENSMUSG00000014769.11	novel	1758	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2027.92287821801	10069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	False	NA	-13	True	ATTAAA	-15	NA	15718560	15696220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713437_15714673_15714786_15718414
ENSMUSG00000014769.11_15696221_15718560_3	chr17	-	815	6	NNC	ENSMUSG00000014769.11	novel	1758	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1969.29053214603	20255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	False	NA	-13	True	ATTAAA	-15	NA	15718560	15696220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_15696468_15697576_15697679_15710417_15710548_15713359_15713442_15714677_15714786_15718414
ENSMUSG00000014769.11_15696221_15718560_4	chr17	-	814	6	NNC	ENSMUSG00000014769.11	novel	1758	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2476.68875719175	4494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	False	NA	-13	True	ATTAAA	-15	NA	15718560	15696220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_15696468_15697576_15697679_15710417_15710548_15713359_15713437_15714673_15714786_15718414
ENSMUSG00000014769.11_15696221_15718560_5	chr17	-	748	6	NNC	ENSMUSG00000014769.11	novel	1970	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1973.1696936655	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	False	NA	-13	True	ATTAAA	-15	NA	15718560	15696220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_15696370_15697550_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
ENSMUSG00000014771.14_15741837_15747563_1	chr17	-	1031	7	NNC	ENSMUSG00000014771.14	novel	1120	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	325.810101473577	394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGTACCTCATAATT	NA	False	NA	-14	True	NA	NA	NA	15747563	15741836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747252_15747370_15747458
ENSMUSG00000014771.14_15741837_15747563_2	chr17	-	1034	7	NNC	ENSMUSG00000014771.14	novel	1120	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	325.810101473577	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGTACCTCATAATT	NA	False	NA	-14	True	NA	NA	NA	15747563	15741836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747252_15747360_15747445
ENSMUSG00000014791.11_106032241_106036609_1	chr8	+	2406	20	FSM	ENSMUSG00000014791.11	ENSMUST00000109375.4	3189	20	0	783	0	0	multi-exon	FALSE	canonical	2	9	junction_11	6.90778195396653	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTGTTAAATCAGCTC	NA	False	NA	6	True	AATAAA	-17	NA	106032240	106036609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106032462_106032598_106032640_106032746_106032820_106033009_106033061_106033227_106033398_106033485_106033586_106033670_106033823_106033919_106033999_106034094_106034146_106034226_106034350_106034433_106034566_106034665_106034768_106034863_106034973_106035080_106035218_106035303_106035468_106035553_106035667_106035745_106035851_106035956_106036040_106036124_106036212_106036296
ENSMUSG00000014837.16_106008314_106016136_1	chr8	-	1859	7	FSM	ENSMUSG00000014837.16	ENSMUST00000014981.8	3492	7	360	1273	0	0	multi-exon	FALSE	canonical	3	11	junction_6	11.0302614051829	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGCTTTGGGTGTCTGG	NA	False	NA	NA	False	AATAGA	-41	NA	106016136	106008313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106016035
ENSMUSG00000014846.13_106194125_106198024_1	chr8	-	993	4	FSM	ENSMUSG00000014846.13	ENSMUST00000014990.13	1127	4	134	0	134	0	multi-exon	FALSE	canonical	2	4	junction_3	3.55902608401044	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGACTGACTCAGTCTACA	NA	False	NA	0	True	AATAAA	-19	NA	106198024	106194124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106194657_106194787_106194942_106195071_106195266_106197911
ENSMUSG00000014856.13_106053020_106055689_1	chr8	+	744	6	NNC	ENSMUSG00000014856.13	novel	785	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	155.915874753022	1521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCGTGTGGGTGATGATG	1	True	NA	18	True	AATAAA	-20	NA	106053019	106055689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_106053107_106053689_106053779_106054801_106054862_106054953_106055091_106055239_106055325_106055403
ENSMUSG00000014856.13_106053020_106055689_2	chr8	+	979	4	ISM	ENSMUSG00000014856.13	ENSMUST00000126705.9	895	5	0	-5	0	0	intron_retention	FALSE	canonical	3	392	junction_2	12.9614813968157	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCGTGTGGGTGATGATG	1	True	NA	18	True	AATAAA	-20	NA	106053019	106055689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953
ENSMUSG00000014856.13_106053020_106055689_3	chr8	+	769	6	NNC	ENSMUSG00000014856.13	novel	785	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_4	158.439893966135	1678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCGTGTGGGTGATGATG	1	True	NA	18	True	AATAAA	-20	NA	106053019	106055689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055091_106055221_106055325_106055403
ENSMUSG00000014867.10_26806393_26810184_1	chr2	-	1209	6	Fusion	ENSMUSG00000014867.10_ENSMUSG00000015790.17	novel	3281	6	NA	NA	-3642	-924	multi-exon	FALSE	non_canonical	0	0	junction_1	0	934	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCGTCCCGGAAGGAAGC	NA	False	NA	NA	False	NA	NA	NA	26810184	26806392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_-_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809707
ENSMUSG00000014867.10_26806393_26810184_2	chr2	-	1302	6	Fusion	ENSMUSG00000014867.10_ENSMUSG00000015790.17	novel	3281	6	NA	NA	-3642	-924	multi-exon	FALSE	non_canonical	0	0	junction_1	0	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCGTCCCGGAAGGAAGC	NA	False	NA	NA	False	NA	NA	NA	26810184	26806392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_-_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809614
ENSMUSG00000014867.10_26810052_26823437_1	chr2	-	2778	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	503	0	-42	0	multi-exon	TRUE	canonical	3	778	junction_1	38.262252939418	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGTGGTCCTATATGG	NA	False	NA	-2	True	AATAAA	-18	NA	26823437	26810051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
ENSMUSG00000014867.10_26810838_26823437_1	chr2	-	1992	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	503	786	-42	-786	multi-exon	FALSE	canonical	3	778	junction_1	38.262252939418	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGTGTTTCTCTTTTTGG	NA	False	NA	-1	True	TTTAAA	-20	NA	26823437	26810837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
ENSMUSG00000014873.16_26803393_26806542_1	chr2	+	1175	9	NIC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	-2986	-3291	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGCCAGGAAGGAACGGG	NA	False	NA	NA	False	NA	NA	NA	26803392	26806542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
ENSMUSG00000014873.16_26806393_26810184_1	chr2	+	1172	6	NNC	ENSMUSG00000014873.16	novel	2519	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	124.124775931318	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGCCAAACCAATATGT	NA	False	NA	26	True	CATAAA	-21	NA	26806392	26810184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808890_26809068_26809203_26809371_26809738
ENSMUSG00000014873.16_26806393_26810184_2	chr2	+	1122	6	NIC	ENSMUSG00000014873.16	novel	2519	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	115.994827470883	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGCCAAACCAATATGT	NA	False	NA	26	True	CATAAA	-21	NA	26806392	26810184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808940_26809068_26809203_26809371_26809738
ENSMUSG00000014873.16_26806393_26810184_3	chr2	+	1186	6	NIC	ENSMUSG00000014873.16	novel	2519	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	119.474516111177	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGCCAAACCAATATGT	NA	False	NA	26	True	CATAAA	-21	NA	26806392	26810184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808876_26809068_26809203_26809371_26809738
ENSMUSG00000014932.16_32768542_32844401_1	chr5	+	4110	12	FSM	ENSMUSG00000014932.16	ENSMUST00000202543.4	2657	12	27	-1480	0	0	multi-exon	FALSE	canonical	3	599	junction_1	80.0238600782178	623	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768541	32844401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ENSMUSG00000014956.16_32616674_32650100_1	chr5	+	2279	6	NIC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	108	0	intron_retention	FALSE	canonical	0	0	junction_1	552.155050687757	861	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGAGTGATTATTCTGT	3182	False	NA	23	True	AGTAAA	-20	NA	32616673	32650100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_32616752_32640769_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ENSMUSG00000014959.13_70491934_70521786_1	chr2	+	1923	10	FSM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	14	301	0	-279	multi-exon	FALSE	canonical	3	519	junction_9	56.2121203045731	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTTGGTCTCTGTGA	NA	False	NA	15	True	ACTAAA	-20	NA	70491933	70521786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ENSMUSG00000014980.15_152246486_152262354_1	chr1	-	1047	5	NNC	ENSMUSG00000014980.15	novel	1133	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	184.305961650729	1476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCGTAATCATCCATCA	NA	False	NA	-5	True	AATAAA	-29	NA	152262354	152246485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_152247035_152247504_152247647_152259012_152259149_152259449_152259525_152262209
ENSMUSG00000015013.10_123338380_123342328_1	chr8	+	741	5	NIC	ENSMUSG00000015013.10	novel	1659	5	NA	NA	0	-1071	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	280.449973257264	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTACGTTGTCCTGTGTC	5517	False	NA	24	True	ACTAAA	-16	NA	123338379	123342328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_123338433_123339804_123339978_123340659_123340748_123340898_123341127_123342129
ENSMUSG00000015013.10_123338380_123342328_2	chr8	+	892	4	NIC	ENSMUSG00000015013.10	novel	1659	5	NA	NA	0	-1071	intron_retention	FALSE	canonical	3	528	junction_1	87.3473271231327	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTACGTTGTCCTGTGTC	5517	False	NA	24	True	ACTAAA	-16	NA	123338379	123342328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_123338433_123339804_123339978_123340659_123341127_123342129
ENSMUSG00000015023.8_111702036_111724432_1	chr8	-	2139	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	0	408	0	-408	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCGCTTCCCTGGTGTAA	7686	False	NA	NA	False	NA	NA	NA	111724432	111702035	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ENSMUSG00000015023.8_111702154_111724432_1	chr8	-	2021	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	0	526	0	-526	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATAGAGGTCAGGAGAG	7686	False	NA	NA	False	AATAAA	-16	NA	111724432	111702153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ENSMUSG00000015112.16_6041218_6217143_1	chr6	-	2949	17	NIC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_15	193.208396233187	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	-5	True	NA	-3	True	AATAAA	-16	NA	6217143	6041217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6191263_6191318_6216995
ENSMUSG00000015112.16_6041710_6217143_1	chr6	-	2600	18	FSM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	-25	492	-25	-491	multi-exon	FALSE	canonical	3	190	junction_9	125.074538329783	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAGCCTGGACTCAAATT	-5	True	NA	NA	False	TATAAA	-37	NA	6217143	6041709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ENSMUSG00000015112.16_6068104_6217118_1	chr6	-	2156	15	NNC	ENSMUSG00000015112.16	novel	616	4	NA	NA	0	163	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	178.774698593349	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCACACATGTGTTATT	20	False	6217138	-9	True	AATAAA	-14	NA	6217118	6068103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_6068700_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ENSMUSG00000015120.16_25479484_25492357_1	chr17	-	2697	8	FSM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	0	-1411	0	1406	multi-exon	FALSE	canonical	3	84	junction_7	2152.45295286232	2982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4747	False	NA	-1	True	ATTAAA	-19	NA	25492357	25479483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491740_25492294
ENSMUSG00000015120.16_25479484_25492371_1	chr17	-	2483	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	137	-1796	-14	1406	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	8578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4733	False	NA	-1	True	ATTAAA	-19	NA	25492371	25479483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
ENSMUSG00000015120.16_25480895_25492371_1	chr17	-	1063	7	NNC	ENSMUSG00000015120.16	novel	1286	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1821.27488925264	6015	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTTTGTTGCATT	4733	False	NA	NA	False	AATAAA	-9	NA	25492371	25480894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492303
ENSMUSG00000015120.16_25480895_25492371_2	chr17	-	1062	7	NNC	ENSMUSG00000015120.16	novel	1286	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	1766.93640236427	5214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTTTGTTGCATT	4733	False	NA	NA	False	AATAAA	-9	NA	25492371	25480894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488240_25488376_25488454_25492294
ENSMUSG00000015120.16_25480895_25492371_3	chr17	-	1068	7	NNC	ENSMUSG00000015120.16	novel	1286	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1806.32072333668	5208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTTTGTTGCATT	4733	False	NA	NA	False	AATAAA	-9	NA	25492371	25480894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_25481466_25483739_25483820_25484092_25484192_25487507_25487588_25488165_25488250_25488376_25488454_25492294
ENSMUSG00000015120.16_25480895_25492581_1	chr17	-	1121	7	NIC	ENSMUSG00000015120.16	novel	1286	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTTTGTTGCATT	4523	False	NA	NA	False	AATAAA	-9	NA	25492581	25480894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
ENSMUSG00000015120.16_25480895_25492841_1	chr17	-	1381	7	NIC	ENSMUSG00000015120.16	novel	1286	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTTTGTTGCATT	4263	False	NA	NA	False	AATAAA	-9	NA	25492841	25480894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
ENSMUSG00000015120.16_25481153_25492371_1	chr17	-	804	7	NNC	ENSMUSG00000015120.16	novel	1559	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	1766.93640236427	1323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCTAGCAGCTAGTTT	4733	False	NA	NA	False	GATAAA	-15	NA	25492371	25481152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488240_25488376_25488454_25492294
ENSMUSG00000015120.16_25481153_25492371_2	chr17	-	810	7	NNC	ENSMUSG00000015120.16	novel	1559	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1806.32072333668	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCTAGCAGCTAGTTT	4733	False	NA	NA	False	GATAAA	-15	NA	25492371	25481152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_25481466_25483739_25483820_25484092_25484192_25487507_25487588_25488165_25488250_25488376_25488454_25492294
ENSMUSG00000015120.16_25481153_25492371_3	chr17	-	1042	8	FSM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	-14	258	-14	0	multi-exon	FALSE	canonical	3	84	junction_7	2152.45295286232	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCTAGCAGCTAGTTT	4733	False	NA	NA	False	GATAAA	-15	NA	25492371	25481152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491740_25492294
ENSMUSG00000015120.16_25481153_25492581_1	chr17	-	863	7	NIC	ENSMUSG00000015120.16	novel	1559	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCTAGCAGCTAGTTT	4523	False	NA	NA	False	GATAAA	-15	NA	25492581	25481152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
ENSMUSG00000015120.16_25481153_25493276_1	chr17	-	867	7	FSM	ENSMUSG00000015120.16	ENSMUST00000049911.16	1138	7	8	263	0	0	multi-exon	FALSE	canonical	3	77	junction_6	1792.78505404301	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCTAGCAGCTAGTTT	3828	False	NA	NA	False	GATAAA	-15	NA	25493276	25481152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493146
ENSMUSG00000015120.16_25484927_25492371_1	chr17	-	2899	4	FSM	ENSMUSG00000015120.16	ENSMUST00000172868.8	2755	4	470	-614	-14	614	multi-exon	FALSE	canonical	3	4214	junction_3	351.970011348821	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCCAACCCCACCTCAC	4733	False	NA	NA	False	NA	NA	NA	25492371	25484926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25487588_25488165_25488250_25488376_25488454_25492294
ENSMUSG00000015126.10_25459144_25461772_1	chr17	+	1171	6	NNC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	166.883672059312	1107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4603	False	NA	28	True	AATAAA	-18	NA	25459143	25461772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_25459339_25459417_25459617_25460037_25460232_25460661_25460836_25461132_25461197_25461427
ENSMUSG00000015126.10_25459144_25461772_2	chr17	+	949	5	NNC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	191.317145075918	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4603	False	NA	28	True	AATAAA	-18	NA	25459143	25461772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_25459320_25460041_25460232_25460661_25460836_25461132_25461197_25461427
ENSMUSG00000015126.10_25459144_25461772_3	chr17	+	972	5	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	185.290312752718	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4603	False	NA	28	True	AATAAA	-18	NA	25459143	25461772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_25459339_25460037_25460232_25460661_25460836_25461132_25461197_25461427
ENSMUSG00000015126.10_25459144_25461772_4	chr17	+	1173	6	NNC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	164.613000701646	1052	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4603	False	NA	28	True	AATAAA	-18	NA	25459143	25461772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_25459320_25459417_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
ENSMUSG00000015126.10_25459144_25461772_5	chr17	+	1592	5	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	382	junction_1	32.0702354216492	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4603	False	NA	28	True	AATAAA	-18	NA	25459143	25461772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_25459339_25459417_25460232_25460661_25460836_25461132_25461197_25461427
ENSMUSG00000015143.16_80214321_80215762_1	chr12	-	1065	2	FSM	ENSMUSG00000015143.16	ENSMUST00000219382.2	1410	2	1163	-818	1163	0	multi-exon	FALSE	canonical	3	305	junction_1	0	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTTTGCTTGTTCCTT	5394	False	NA	-5	True	ATTAAA	-16	NA	80215762	80214320	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_80215255_80215631
ENSMUSG00000015143.16_80214506_80215757_1	chr12	-	875	2	FSM	ENSMUSG00000015143.16	ENSMUST00000219382.2	1410	2	1168	-633	1168	-185	multi-exon	FALSE	canonical	3	305	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTTTCAAAGAAGATAAT	5399	False	NA	-17	True	ATTAAA	-20	NA	80215757	80214505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_80215255_80215631
ENSMUSG00000015149.15_28482197_28488086_1	chr7	+	1220	9	NNC	ENSMUSG00000015149.15	novel	1585	13	NA	NA	-1854	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	46.3195423120739	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTGTGTGGCCTCTG	NA	False	NA	13	True	ATTAAA	-22	NA	28482196	28488086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487344_28487681_28487712
ENSMUSG00000015165.17_28518068_28521674_1	chr7	+	1162	6	ISM	ENSMUSG00000015165.17	ENSMUST00000174882.8	1850	13	5298	0	809	0	3prime_fragment	FALSE	canonical	3	4757	junction_1	533.031931501294	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGCTGGGGCTCCAAG	NA	False	NA	16	True	AATAAA	-19	NA	28518067	28521674	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ENSMUSG00000015165.17_28518242_28521674_1	chr7	+	988	6	ISM	ENSMUSG00000015165.17	ENSMUST00000174882.8	1850	13	5472	0	983	0	3prime_fragment	FALSE	canonical	3	4757	junction_1	533.031931501294	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGCTGGGGCTCCAAG	NA	False	NA	16	True	AATAAA	-19	NA	28518241	28521674	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ENSMUSG00000015176.12_46064380_46072901_1	chr19	+	2442	13	NNC	ENSMUSG00000015176.12	novel	2978	13	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_11	261.203451461797	1107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTGTGATTTTCAGA	215	False	NA	15	True	ATTAAA	-15	NA	46064379	46072901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072024_46072189_46072283_46072450
ENSMUSG00000015176.12_46064452_46072974_1	chr19	+	2443	13	NNC	ENSMUSG00000015176.12	novel	3523	13	NA	NA	0	74	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_11	261.203451461797	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGGTAATAATTTTCCC	28	False	NA	29	True	ATTAAA	-34	NA	46064451	46072974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072024_46072189_46072283_46072450
ENSMUSG00000015217.12_70599524_70604282_1	chrX	+	1557	5	NNC	ENSMUSG00000015217.12	novel	1571	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	430.775100835691	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCACCAGTCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	70599523	70604282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_70599615_70601662_70601814_70602038_70602179_70602703_70602869_70603272
ENSMUSG00000015217.12_70599524_70604282_2	chrX	+	1122	6	NNC	ENSMUSG00000015217.12	novel	1571	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	404.484066435255	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCACCAGTCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	70599523	70604282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_70599615_70601662_70601814_70602038_70602179_70602703_70602879_70603272_70603605_70604049
ENSMUSG00000015217.12_70599596_70604282_1	chrX	+	1431	5	NNC	ENSMUSG00000015217.12	novel	1571	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	347.83140671883	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCACCAGTCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	70599595	70604282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_70599615_70601726_70601814_70602038_70602179_70602703_70602879_70603272
ENSMUSG00000015247.11_53011950_53021723_1	chr4	+	1145	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	70	337	0	147	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATGTTCATTTTTCCTG	2	True	NA	16	True	AATAAA	-18	NA	53011949	53021723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ENSMUSG00000015247.11_53011950_53021916_1	chr4	+	1338	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	70	144	0	-144	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTCTTAGTGTGTTTGT	2	True	NA	NA	False	AATATA	-22	NA	53011949	53021916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ENSMUSG00000015290.16_73409324_73412133_1	chrX	-	2296	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	146	0	-14	0	multi-exon	FALSE	canonical	3	1598	junction_1	83.5636816379513	4787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGAATCCTGTGTAATA	NA	False	NA	-6	True	AATAAA	-20	NA	73412133	73409323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
ENSMUSG00000015312.10_80765907_80767593_1	chr10	+	839	4	FSM	ENSMUSG00000015312.10	ENSMUST00000015456.10	1284	4	0	445	0	0	multi-exon	FALSE	canonical	3	88	junction_3	10.2089285540757	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCCGTGATACCTTCTGG	248	False	NA	50	True	NA	NA	NA	80765906	80767593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80766194_80766281_80766384_80766862_80767086_80767366
ENSMUSG00000015335.17_29980956_29983636_1	chr2	-	1136	5	NNC	ENSMUSG00000015335.17	novel	1165	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	288.19177642674	2163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTGGACTCTTTCC	NA	False	NA	-3	True	ATTAAA	-16	NA	29983636	29980955	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_29981579_29981683_29981846_29981999_29982078_29982416_29982554_29983500
ENSMUSG00000015337.6_30061505_30064081_1	chr2	+	565	3	NNC	ENSMUSG00000015337.6	novel	1063	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	184.5	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTGTCCTGCTGCTT	NA	False	NA	34	True	NA	NA	NA	30061504	30064081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_30061581_30062853_30062964_30063702
ENSMUSG00000015337.6_30062030_30064081_1	chr2	+	538	3	FSM	ENSMUSG00000015337.6	ENSMUST00000015481.6	1063	3	525	0	525	0	multi-exon	FALSE	canonical	3	314	junction_1	35	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTGTCCTGCTGCTT	-1	True	NA	34	True	NA	NA	NA	30062029	30064081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30062079_30062853_30062964_30063702
ENSMUSG00000015337.6_30063483_30068463_1	chr2	+	1806	12	NIC	ENSMUSG00000015337.6	novel	1063	3	NA	NA	1978	4382	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTAGCCTCGCCTCTTCCG	757	False	NA	NA	False	NA	NA	NA	30063482	30068463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068401
ENSMUSG00000015337.6_30063483_30068463_2	chr2	+	2004	11	NIC	ENSMUSG00000015337.6	novel	1063	3	NA	NA	1978	4382	intron_retention	FALSE	non_canonical	0	0	junction_1	0	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTAGCCTCGCCTCTTCCG	757	False	NA	NA	False	NA	NA	NA	30063482	30068463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067978_30068401
ENSMUSG00000015341.18_23731362_23747082_1	chr8	-	1789	6	NNC	ENSMUSG00000015341.18	novel	1792	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	521.646393642283	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTCTTGTCTTAGTCTA	NA	False	NA	-19	True	AATAAA	-1	NA	23747082	23731361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_23732648_23734746_23734815_23735878_23735981_23740264_23740418_23746689_23746823_23747035
ENSMUSG00000015341.18_23731362_23747082_2	chr8	-	1948	6	NNC	ENSMUSG00000015341.18	novel	1792	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	518.716647120564	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTCTTGTCTTAGTCTA	NA	False	NA	-19	True	AATAAA	-1	NA	23747082	23731361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_23732648_23734746_23734810_23735878_23735920_23735968_23735981_23740264_23740418_23746689
ENSMUSG00000015341.18_23732282_23747082_1	chr8	-	864	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	8	920	0	0	multi-exon	FALSE	canonical	3	715	junction_5	234.329170185873	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTCCCCCAGATTAGTA	NA	False	NA	NA	False	NA	NA	NA	23747082	23732281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
ENSMUSG00000015341.18_23732425_23747082_1	chr8	-	721	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	8	1063	0	-143	multi-exon	FALSE	canonical	3	715	junction_5	234.329170185873	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAAAGCCATTTAAAACAC	NA	False	NA	NA	False	AATAAA	-22	NA	23747082	23732424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
ENSMUSG00000015354.9_95519654_95577601_1	chr9	+	1890	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	0	2548	0	865	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGCAGCCAGATAACC	8375	False	NA	NA	False	AATAAA	-15	NA	95519653	95577601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ENSMUSG00000015354.9_95519792_95577601_1	chr9	+	1752	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	138	2548	138	865	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGCAGCCAGATAACC	8513	False	NA	NA	False	AATAAA	-15	NA	95519791	95577601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ENSMUSG00000015357.11_65201577_65237542_1	chr9	+	2411	13	FSM	ENSMUSG00000015357.11	ENSMUST00000113824.8	2809	13	0	398	0	-397	multi-exon	FALSE	canonical	3	55	junction_5	89.4905333292609	366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGGGATCCCATTGTTT	6186	False	NA	19	True	AATAAA	-15	NA	65201576	65237542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ENSMUSG00000015363.14_88960275_88970336_1	chr15	+	1436	10	FSM	ENSMUSG00000015363.14	ENSMUST00000081702.12	2439	10	59	944	0	0	multi-exon	FALSE	canonical	3	86	junction_1	6.70175948888899	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCTTCCCAGCAGCC	NA	False	NA	NA	False	AATAAA	-19	NA	88960274	88970336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
ENSMUSG00000015365.16_88867112_88890155_1	chr15	+	2035	12	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	0	49196	0	10881	5prime_fragment	TRUE	canonical	3	47	junction_4	7.60382678775509	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGTGTTTGTATTTAATCA	2907	False	NA	NA	False	AAAAAG	-35	NA	88867111	88890155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899
ENSMUSG00000015365.16_88867112_88939355_1	chr15	+	4070	28	NNC	ENSMUSG00000015365.16	novel	4133	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	15.8574756379344	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTCTGTCTCAGAATG	2907	False	NA	4	True	AATAAA	-19	NA	88867111	88939355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88891877_88895565_88895625_88896102_88896188_88896254_88896399_88902352_88902453_88904463_88904643_88905366_88905514_88906203_88906326_88907815_88907916_88908869_88909035_88910665_88910840_88931009_88931160_88937580_88937689_88938429_88938568_88938713_88938834_88939018
ENSMUSG00000015377.11_89069015_89080647_1	chr15	-	1982	20	FSM	ENSMUSG00000015377.11	ENSMUST00000078953.9	4585	20	4	2599	0	0	multi-exon	FALSE	canonical	3	25	junction_9	20.4859251730037	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080647	89069014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071254_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ENSMUSG00000015467.15_34824835_34832392_2	chr17	-	1339	8	NNC	ENSMUSG00000015467.15	novel	1150	9	NA	NA	1902	7488	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCTATGATGGGCA	7047	False	NA	NA	False	GGGGCT	-10	NA	34832392	34824834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_34825146_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226_34831435_34832254
ENSMUSG00000015478.14_34820065_34822635_2	chr17	-	1201	5	NNC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_4	470.136682253151	1700	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTCCCCAGTCTCTCCC	824	False	NA	-23	True	NA	NA	NA	34822635	34820064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058_34821183_34822307
ENSMUSG00000015478.14_34820065_34822635_4	chr17	-	1154	5	NIC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_2	458.87927333886	311	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTCCCCAGTCTCTCCC	824	False	NA	-23	True	NA	NA	NA	34822635	34820064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_34820641_34820714_34820833_34821058_34821172_34821264_34821284_34822307
ENSMUSG00000015478.14_34820065_34822635_5	chr17	-	1190	5	NIC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_4	467.114212479132	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTCCCCAGTCTCTCCC	824	False	NA	-23	True	NA	NA	NA	34822635	34820064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058_34821172_34822307
ENSMUSG00000015536.15_114954795_114965265_1	chr13	+	1080	7	NIC	ENSMUSG00000015536.15	novel	1193	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_5	58.0672502840935	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTGTCTCCTTTTTA	NA	False	NA	NA	False	AATAAA	-24	NA	114954794	114965265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961802_114962693_114962818_114964824
ENSMUSG00000015536.15_114954795_114965265_2	chr13	+	1054	6	FSM	ENSMUSG00000015536.15	ENSMUST00000166176.9	1855	6	0	801	0	0	multi-exon	FALSE	canonical	3	20	junction_1	59.3450924677011	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTGTCTCCTTTTTA	NA	False	NA	NA	False	AATAAA	-24	NA	114954794	114965265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_114954860_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ENSMUSG00000015536.15_114954795_114965542_1	chr13	+	1453	7	FSM	ENSMUSG00000015536.15	ENSMUST00000015680.11	1152	7	-18	-283	0	0	multi-exon	FALSE	canonical	3	133	junction_2	16.9844700306551	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGCATCCAGTTTTTGA	NA	False	NA	NA	False	ATTAAA	-20	NA	114954794	114965542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ENSMUSG00000015542.18_115073658_115078158_1	chr11	-	1427	6	ISM	ENSMUSG00000015542.18	ENSMUST00000103038.8	1143	7	0	0	0	0	intron_retention	FALSE	canonical	2	2	junction_5	44.6345157921535	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	-5	True	AGTAAA	-16	NA	115078158	115073657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574
ENSMUSG00000015568.17_69333309_69359586_1	chr8	+	3293	11	NNC	ENSMUSG00000015568.17	novel	4115	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	38.5031167569588	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCATCATTTTGTATC	NA	False	NA	13	True	AATAAA	-24	NA	69333308	69359586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_69333493_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157_69357816_69358471
ENSMUSG00000015575.16_26895386_26918621_1	chr17	+	765	4	NNC	ENSMUSG00000015575.16	novel	823	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	381	junction_3	528.401993435553	5218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	37	True	AATAAA	-25	NA	26895385	26918621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_26895553_26901651_26901700_26914328_26914443_26918185
ENSMUSG00000015647.10_179818166_179819617_1	chr2	-	981	6	ISM	ENSMUSG00000015647.10	ENSMUST00000015791.6	11388	79	48035	0	-237	0	3prime_fragment	TRUE	canonical	3	300	junction_2	17.8370401132026	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179819617	179818165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527
ENSMUSG00000015656.18_40712469_40716496_1	chr9	+	2205	9	FSM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	189	0	-103	0	multi-exon	FALSE	canonical	3	3928	junction_3	6050.21958150074	94883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2356	False	NA	10	True	AATAAA	-20	NA	40712468	40716496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ENSMUSG00000015656.18_40712572_40716496_1	chr9	+	2201	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	3928	junction_3	6242.18814002832	9746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715992_40716227
ENSMUSG00000015656.18_40712572_40716496_2	chr9	+	2094	9	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7912.77222280536	45887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715043_40715239_40715460_40715660_40715758_40715992_40716227
ENSMUSG00000015656.18_40712572_40716496_3	chr9	+	2102	9	FSM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	292	0	0	0	multi-exon	FALSE	canonical	3	3928	junction_3	6050.21958150074	91115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ENSMUSG00000015656.18_40712572_40716496_4	chr9	+	2095	9	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	246	junction_8	7347.50570665821	36312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716234
ENSMUSG00000015656.18_40712572_40716496_5	chr9	+	2092	9	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7690.53829390375	25235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715768_40715992_40716227
ENSMUSG00000015668.14_99666492_99669541_1	chrX	-	1008	7	NNC	ENSMUSG00000015668.14	novel	1626	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	208.783314041669	2332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTACTGCTTGAATATAA	NA	False	NA	-7	True	AATAAA	-14	NA	99669541	99666491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669476
ENSMUSG00000015668.14_99666492_99669541_2	chrX	-	993	7	FSM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	633	0	0	0	multi-exon	FALSE	canonical	3	301	junction_6	98.6728601659713	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTACTGCTTGAATATAA	NA	False	NA	-7	True	AATAAA	-14	NA	99669541	99666491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
ENSMUSG00000015671.12_14787825_14800174_1	chr13	+	857	8	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	0	-2047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1596.10964535648	3228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787824	14800174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_14787901_14790596_14790682_14791336_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_14787825_14800174_10	chr13	+	848	7	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	0	-2047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1761.40661120594	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787824	14800174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798271_14799905
ENSMUSG00000015671.12_14787825_14800174_12	chr13	+	933	9	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	0	-2047	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	2025.33527702823	2611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787824	14800174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14795515_14795585_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_14787825_14800174_13	chr13	+	851	8	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	0	-2047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1640.64072849603	3854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787824	14800174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_14787901_14790609_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_14787825_14800174_14	chr13	+	834	7	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	0	-2047	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	1761.40661120594	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787824	14800174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799905
ENSMUSG00000015671.12_14787825_14800174_15	chr13	+	860	8	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	0	-2047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1626.99130110691	3082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787824	14800174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_14787901_14790596_14790674_14791321_14791466_14793901_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_14787825_14800174_2	chr13	+	515	5	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	0	-2047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2038.69950887815	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787824	14800174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_14787901_14790596_14790674_14791321_14791385_14799787_14799846_14799933
ENSMUSG00000015671.12_14787825_14800174_3	chr13	+	851	8	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	0	-2047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1640.76931930838	8902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787824	14800174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799946
ENSMUSG00000015671.12_14787825_14800174_4	chr13	+	849	8	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	0	-2047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1596.10964535648	1691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787824	14800174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_14787901_14790596_14790674_14791336_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_14787825_14800174_5	chr13	+	849	8	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	0	-2047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1626.99130110691	4413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787824	14800174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_14787901_14790596_14790674_14791321_14791455_14793901_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_14787825_14800174_6	chr13	+	853	8	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	0	-2047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1642.66581494589	4399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787824	14800174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799798_14799846_14799933
ENSMUSG00000015671.12_14787825_14800174_7	chr13	+	855	8	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	0	-2047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1626.99130110691	2399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787824	14800174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_14787901_14790596_14790674_14791321_14791461_14793901_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_14787825_14800174_8	chr13	+	872	8	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	0	-2047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1596.10964535648	10851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787824	14800174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_14787901_14790596_14790682_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_14787825_14800174_9	chr13	+	859	8	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	0	-2047	at_least_one_novel_splicesite	FALSE	canonical	2	143	junction_7	1591.22562183741	16054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787824	14800174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799938
ENSMUSG00000015672.5_14784958_14787622_2	chr13	-	696	3	FSM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	128	2189	-10	0	multi-exon	FALSE	canonical	3	1082	junction_1	15.5	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAGTTGTTACTTTTAAA	NA	False	NA	-83	True	TTTAAA	-9	NA	14787622	14784957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_14785326_14786007_14786190_14787476
ENSMUSG00000015697.15_95222578_95230910_1	chr3	-	2221	10	NIC	ENSMUSG00000015697.15	novel	5652	21	NA	NA	33490	8258	intron_retention	FALSE	non_canonical	0	0	junction_1	0	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGGCCGGGTCCTCTCC	1263	False	NA	NA	False	NA	NA	NA	95230910	95222577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ENSMUSG00000015702.14_95194029_95203475_1	chr3	-	2302	10	NNC	ENSMUSG00000015702.14	novel	1872	13	NA	NA	10640	9378	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTAGGGAGGGGCT	NA	False	NA	NA	False	NA	NA	NA	95203475	95194028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_95194188_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ENSMUSG00000015711.9_95160985_95189028_1	chr3	-	2781	8	FSM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	359	0	359	0	multi-exon	FALSE	canonical	3	150	junction_5	23.7538396466589	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTTTCTTTTTAAAA	4709	False	NA	NA	False	ATTAAA	-19	NA	95189028	95160984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
ENSMUSG00000015714.12_95222578_95230910_1	chr3	+	2033	11	FSM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	183	0	0	0	multi-exon	FALSE	canonical	3	406	junction_10	31.9782738746168	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGGTTAGTTTTTTTCT	4501	False	NA	45	True	AATAAA	-31	NA	95222577	95230910	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ENSMUSG00000015733.14_17637041_17666381_1	chr6	+	1888	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	59	590	0	-590	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	2009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTTGTATATTGTCAT	3	True	NA	32	True	AGTAAA	-39	NA	17637040	17666381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ENSMUSG00000015733.14_17637041_17666723_1	chr6	+	2230	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	59	248	0	-248	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	3295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTATAGATTTTTAAAAAT	3	True	NA	-18	True	AATAAA	-19	NA	17637040	17666723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ENSMUSG00000015733.14_17637041_17666824_1	chr6	+	2331	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	59	147	0	-147	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	3368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCTAATTTCCTCTT	3	True	NA	14	True	AATATA	-14	NA	17637040	17666824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ENSMUSG00000015747.6_95964199_95965142_1	chr3	-	377	2	FSM	ENSMUSG00000015747.6	ENSMUST00000140518.2	266	2	-111	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGCATCATAATTATC	NA	False	NA	NA	False	AATAAA	-16	NA	95965142	95964198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95964427_95964993
ENSMUSG00000015749.13_95836558_95852878_1	chr3	+	1081	5	FSM	ENSMUSG00000015749.13	ENSMUST00000171368.8	878	5	-79	-124	0	1	multi-exon	FALSE	canonical	3	38	junction_1	694.522497835743	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGTGTAGTTTGGTGCA	NA	False	NA	13	True	ATTAAA	-16	NA	95836557	95852878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95836963_95844431_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUSG00000015749.13_95836595_95852878_1	chr3	+	1407	7	NNC	ENSMUSG00000015749.13	novel	3274	7	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	605.465293986552	1927	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGTGTAGTTTGGTGCA	NA	False	NA	13	True	ATTAAA	-16	NA	95836594	95852878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852497
ENSMUSG00000015749.13_95836595_95854702_1	chr3	+	3231	7	NNC	ENSMUSG00000015749.13	novel	3274	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	605.465293986552	3269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTCAGTGTGTGATTG	NA	False	NA	105	True	AATAAA	-22	NA	95836594	95854702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852497
ENSMUSG00000015749.13_95836698_95852878_1	chr3	+	941	5	FSM	ENSMUSG00000015749.13	ENSMUST00000171368.8	878	5	61	-124	0	1	multi-exon	FALSE	canonical	3	38	junction_1	694.522497835743	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGTGTAGTTTGGTGCA	NA	False	NA	13	True	ATTAAA	-16	NA	95836697	95852878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95836963_95844431_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUSG00000015750.16_95801281_95804776_1	chr3	+	2039	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	0	824	0	19	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGGGGGACTTGGCTTT	NA	False	NA	-1	True	AATAAA	-14	NA	95801280	95804776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
ENSMUSG00000015757.11_7668672_7697422_1	chr10	+	1977	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	17	1477	0	-1477	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCCTTCTGTGACTTT	1139	False	NA	NA	False	NA	NA	NA	7668671	7697422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ENSMUSG00000015757.11_7668672_7698327_1	chr10	+	2882	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	17	572	0	-572	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGCTTACTTTTTTCTT	1139	False	NA	10	True	AGTAAA	-15	NA	7668671	7698327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ENSMUSG00000015759.12_47013127_47025791_1	chr14	-	808	6	NNC	ENSMUSG00000015759.12	novel	789	6	NA	NA	0	-103	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	210.694660587306	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTGCTGTGCATTGT	NA	False	NA	NA	False	AATAAA	-14	NA	47025791	47013126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_47013154_47013703_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
ENSMUSG00000015759.12_47013127_47025791_2	chr14	-	1358	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	77	103	0	-103	multi-exon	FALSE	canonical	3	505	junction_4	16.1322658049017	3955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTGCTGTGCATTGT	NA	False	NA	NA	False	AATAAA	-14	NA	47025791	47013126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
ENSMUSG00000015776.13_26795274_26800615_1	chr2	-	1333	4	FSM	ENSMUSG00000015776.13	ENSMUST00000015920.12	973	4	-34	-326	-25	0	multi-exon	FALSE	canonical	3	133	junction_1	17.7951304200522	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTGTCTTTCTTGAT	NA	False	NA	-4	True	AATAAA	-18	NA	26800615	26795273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_26796006_26798104_26798314_26799004_26799086_26800304
ENSMUSG00000015790.17_26803393_26806347_1	chr2	-	1020	9	FSM	ENSMUSG00000015790.17	ENSMUST00000167661.7	1151	9	133	-2	-3	0	multi-exon	FALSE	canonical	3	32	junction_7	110.059571937201	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTCAGTCTGAAACCGT	NA	False	NA	-3	True	AATAAA	-21	NA	26806347	26803392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805782_26805966_26806019_26806268
ENSMUSG00000015790.17_26803393_26806347_2	chr2	-	1051	8	NIC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	328	junction_3	29.0460577254084	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTCAGTCTGAAACCGT	NA	False	NA	-3	True	AATAAA	-21	NA	26806347	26803392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
ENSMUSG00000015790.17_26803393_26806347_3	chr2	-	974	9	NNC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	120.034370077907	1157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTCAGTCTGAAACCGT	NA	False	NA	-3	True	AATAAA	-21	NA	26806347	26803392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806013_26806268
ENSMUSG00000015804.15_45650798_45682940_1	chr5	+	2000	15	Fusion	ENSMUSG00000039682.13_ENSMUSG00000015804.15	novel	2267	13	NA	NA	-48	0	multi-exon	FALSE	canonical	3	45	junction_12	689.258030532152	1111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTGTTGTTGTTTGTA	NA	False	NA	22	True	AGTAAA	-11	NA	45650797	45682940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45679777_45679845_45680763_45680877_45682494
ENSMUSG00000015804.15_45677645_45682943_1	chr5	+	811	4	FSM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	74	3675	0	3	multi-exon	FALSE	canonical	3	1736	junction_3	82.366390124991	3965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTGTTTGTATTC	7406	False	NA	25	True	AGTAAA	-14	NA	45677644	45682943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_45677827_45679777_45679845_45680763_45680877_45682494
ENSMUSG00000015806.13_45591395_45607522_1	chr5	-	1316	7	NNC	ENSMUSG00000015806.13	novel	1380	7	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	371.301614444226	2507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	-19	True	AATAAA	-15	NA	45607522	45591394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_45592021_45595184_45595269_45596634_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
ENSMUSG00000015837.16_50090979_50101618_1	chr11	-	2008	8	NNC	ENSMUSG00000015837.16	novel	2037	8	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	263.494104027287	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTGATCCGTACGAGT	NA	False	NA	-14	True	AATAAA	-22	NA	50101618	50090978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_50091775_50093218_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ENSMUSG00000015837.16_50090979_50101618_2	chr11	-	1996	8	NNC	ENSMUSG00000015837.16	novel	2037	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	337.037877118055	1232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTGATCCGTACGAGT	NA	False	NA	-14	True	AATAAA	-22	NA	50101618	50090978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_50091775_50093225_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098459_50098647_50098744_50101379
ENSMUSG00000015839.7_75505857_75534860_1	chr2	-	2350	5	FSM	ENSMUSG00000015839.7	ENSMUST00000102672.5	2475	5	125	0	-27	0	multi-exon	FALSE	canonical	3	494	junction_1	38.2058568808501	1905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACTTTTTGAATTTA	NA	False	NA	1	True	AATAAA	-22	NA	75534860	75505856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534707
ENSMUSG00000015839.7_75506335_75534860_1	chr2	-	1872	5	FSM	ENSMUSG00000015839.7	ENSMUST00000102672.5	2475	5	125	478	-27	-478	multi-exon	FALSE	canonical	3	494	junction_1	38.2058568808501	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAAGAAGCCAGATACAAA	NA	False	NA	NA	False	NA	NA	NA	75534860	75506334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534707
ENSMUSG00000015839.7_75506854_75534985_1	chr2	-	1478	5	FSM	ENSMUSG00000015839.7	ENSMUST00000102672.5	2475	5	0	997	0	-997	multi-exon	FALSE	canonical	3	494	junction_1	38.2058568808501	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATACAACAAAAAAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	75534985	75506853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534707
ENSMUSG00000015839.7_75521547_75534860_1	chr2	-	1323	2	FSM	ENSMUSG00000015839.7	ENSMUST00000152371.2	1447	2	-27	151	-27	-151	multi-exon	FALSE	canonical	3	19	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTGTGTTGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	75534860	75521546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_75522717_75534707
ENSMUSG00000015850.12_95583511_95585194_1	chr3	-	1171	4	ISM	ENSMUSG00000015850.12	ENSMUST00000015994.4	3856	18	9975	-3	-733	0	3prime_fragment	FALSE	canonical	3	19	junction_3	2.44948974278318	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTCTTCGTTATGTTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	95585194	95583510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_95584280_95584420_95584566_95584837_95585018_95585117
ENSMUSG00000015869.17_116361671_116380969_1	chr11	-	1636	10	FSM	ENSMUSG00000015869.17	ENSMUST00000106391.8	1841	10	205	0	146	0	multi-exon	FALSE	canonical	3	803	junction_5	49.0028973696177	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTGCTGAGCTCCCAG	NA	False	NA	-7	True	AATAAA	-27	NA	116380969	116361670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ENSMUSG00000015882.19_45827261_45857469_1	chr5	-	3284	21	NIC	ENSMUSG00000015882.19	novel	10477	8	NA	NA	27451	27262	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTTAGCGCCAGAGTTTT	23	False	NA	NA	False	NA	NA	NA	45857469	45827260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ENSMUSG00000015882.19_45827261_45858491_1	chr5	-	4306	21	NIC	ENSMUSG00000015882.19	novel	10477	8	NA	NA	26429	27262	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTTAGCGCCAGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	45858491	45827260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ENSMUSG00000015882.19_45858677_46014843_1	chr5	-	1440	7	FSM	ENSMUSG00000015882.19	ENSMUST00000045586.13	5708	7	114	4154	0	-885	multi-exon	FALSE	canonical	3	11	junction_1	22.5197444232586	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGGGTTATCAGTTC	NA	False	NA	NA	False	ATTAAA	-22	NA	46014843	45858676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_45859340_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ENSMUSG00000015889.9_93289273_93320737_1	chr10	+	2023	19	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	107.988296690994	1374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289272	93320737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316559_93316649_93318111_93318195_93318823_93318929_93320524
ENSMUSG00000015889.9_93289273_93320737_2	chr10	+	1947	18	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_16	100.405509988178	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289272	93320737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318823_93318929_93320524
ENSMUSG00000015932.9_143757469_143784252_1	chr2	+	690	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	229	992	229	-992	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTGTCTTGTCATCTT	NA	False	NA	18	True	AGTAAA	-30	NA	143757468	143784252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
ENSMUSG00000015932.9_143757469_143784373_1	chr2	+	811	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	229	871	229	-871	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTTTTCATGAGGTGA	NA	False	NA	11	True	ATTAAA	-16	NA	143757468	143784373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
ENSMUSG00000015932.9_143757469_143785244_1	chr2	+	1682	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	229	0	229	0	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	9572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCTTTGTGTGGTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	143757468	143785244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
ENSMUSG00000015937.16_56221435_56283253_1	chr13	-	1852	9	FSM	ENSMUSG00000015937.16	ENSMUST00000016081.13	2046	9	191	3	0	0	multi-exon	FALSE	canonical	3	557	junction_5	233.718279933342	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGGCCGTGTTTTGTGT	6096	False	NA	-8	True	AGTAAA	-15	NA	56283253	56221434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ENSMUSG00000015961.9_177590742_177624067_1	chr1	-	2547	13	FSM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	10	214	0	0	multi-exon	FALSE	canonical	3	944	junction_9	76.3848079718008	1809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTGTGTTGTTTTTC	NA	False	NA	-3	True	ATTAAA	-22	NA	177624067	177590741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ENSMUSG00000015961.9_177591097_177624067_1	chr1	-	2192	13	FSM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	10	569	0	-355	multi-exon	FALSE	canonical	3	944	junction_9	76.3848079718008	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGGATATTTTTCTTT	NA	False	NA	-3	True	ATTAAA	-19	NA	177624067	177591096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ENSMUSG00000015971.6_29700362_29716571_1	chr14	+	2305	14	NNC	ENSMUSG00000015971.6	novel	2328	14	NA	NA	0	-1253	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	85.8768900035766	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTGCTACTTACCGGAT	NA	False	NA	6	True	ATTAAA	-19	NA	29700361	29716571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917_29715103_29716243
ENSMUSG00000015994.11_26488994_26505678_1	chr8	-	1686	9	FSM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	0	244	0	154	multi-exon	FALSE	canonical	3	814	junction_5	99.1573875210516	468	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATAGTGTTTGATGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	26505678	26488993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_26489593_26489796_26489969_26490997_26491061_26494443_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497_26503584_26505408
ENSMUSG00000016018.5_112935755_113004428_1	chr13	-	1280	6	NNC	ENSMUSG00000016018.5	novel	498	4	NA	NA	5125	68197	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGTTTACTAAGAGAGTG	NA	False	NA	NA	False	NA	NA	NA	113004428	112935754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_112935912_112971392_112971548_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ENSMUSG00000016018.5_112937326_113004305_1	chr13	-	1475	6	NIC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	5248	66626	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGCGCGGGGACGAAACCC	NA	False	NA	NA	False	NA	NA	NA	113004305	112937325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_112937801_112971392_112971548_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ENSMUSG00000016018.5_112937326_113004428_1	chr13	-	1443	5	NIC	ENSMUSG00000016018.5	novel	498	4	NA	NA	5125	66626	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGCGCGGGGACGAAACCC	NA	False	NA	NA	False	NA	NA	NA	113004428	112937325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_112937801_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ENSMUSG00000016018.5_112937703_113004428_1	chr13	-	1221	6	NIC	ENSMUSG00000016018.5	novel	498	4	NA	NA	5125	66249	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGAACAGACCGCGGCG	NA	False	NA	NA	False	NA	NA	NA	113004428	112937702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_112937801_112971392_112971548_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ENSMUSG00000016018.5_113004389_113063919_1	chr13	-	3233	27	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	132.623042122307	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAACATCATTCTGAGA	7249	False	NA	-105	True	NA	NA	NA	113063919	113004388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028427_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ENSMUSG00000016181.10_192789595_192812552_1	chr1	-	2657	12	FSM	ENSMUSG00000016181.11	ENSMUST00000085555.7	5570	12	28	2885	0	466	multi-exon	FALSE	canonical	3	56	junction_4	6.18449140061635	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTTATGCGTATTG	NA	False	NA	-17	True	NA	NA	NA	192812552	192789594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
ENSMUSG00000016252.8_174302868_174305882_1	chr2	-	565	3	NIC	ENSMUSG00000016252.8	novel	1697	2	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	13.5	15604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGTTTTGTTTCTGTT	NA	False	NA	-7	True	AATAAA	-19	NA	174305882	174302867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_174303015_174304292_174304423_174305594
ENSMUSG00000016252.8_174302868_174305882_2	chr2	-	417	3	NNC	ENSMUSG00000016252.8	novel	421	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1326.5	22787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGTTTTGTTTCTGTT	NA	False	NA	-7	True	AATAAA	-19	NA	174305882	174302867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_174303015_174304277_174304423_174305757
ENSMUSG00000016252.8_174302868_174305882_3	chr2	-	401	3	NNC	ENSMUSG00000016252.8	novel	421	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1326.5	22308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGTTTTGTTTCTGTT	NA	False	NA	-7	True	AATAAA	-19	NA	174305882	174302867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_174303006_174304284_174304423_174305757
ENSMUSG00000016252.8_174302868_174314700_1	chr2	-	353	3	Fusion	ENSMUSG00000016257.16_ENSMUSG00000016252.8	novel	421	3	NA	NA	-9	0	multi-exon	FALSE	canonical	0	0	junction_1	21	966	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGTTTTGTTTCTGTT	NA	False	NA	-7	True	AATAAA	-19	NA	174314700	174302867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_-_174303015_174304292_174304423_174314624
ENSMUSG00000016253.13_174257644_174269190_1	chr2	+	2127	15	FSM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	47	105	0	0	multi-exon	FALSE	canonical	3	502	junction_12	51.3083913254758	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGTTTCCAAGAGTAAT	NA	False	NA	-65	True	NA	NA	NA	174257643	174269190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ENSMUSG00000016253.13_174257644_174269295_1	chr2	+	2226	15	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	148.36931650996	1039	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257643	174269295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_174257750_174261825_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ENSMUSG00000016253.13_174257644_174269295_2	chr2	+	2101	14	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_6	158.919241892815	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257643	174269295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ENSMUSG00000016253.13_174257644_174269295_3	chr2	+	2225	15	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	157.844682766164	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257643	174269295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264366_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ENSMUSG00000016253.13_174269286_174280832_1	chr2	+	1435	6	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	1131	11537	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCCCGCTGCTCCTGCC	NA	False	NA	NA	False	NA	NA	NA	174269285	174280832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_174269770_174270370_174270537_174270848_174271000_174275280_174275461_174279957_174280122_174280542
ENSMUSG00000016256.11_174257644_174269295_1	chr2	-	485	5	NNC	ENSMUSG00000016256.11	novel	1441	6	NA	NA	11537	11642	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCGTGCGCCGGACACAA	6711	False	NA	NA	False	NA	NA	NA	174269295	174257643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174269255
ENSMUSG00000016256.11_174257644_174269295_2	chr2	-	2879	13	NIC	ENSMUSG00000016256.11	novel	1441	6	NA	NA	11537	11642	intron_retention	FALSE	non_canonical	0	0	junction_1	0	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCGTGCGCCGGACACAA	6711	False	NA	NA	False	NA	NA	NA	174269295	174257643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ENSMUSG00000016257.16_174306860_174314705_1	chr2	-	1384	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	169	0	-14	0	multi-exon	FALSE	canonical	3	812	junction_2	54.463198583998	2387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGCAGCTCTTCCCAT	NA	False	NA	-4	True	AATAAA	-45	NA	174314705	174306859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
ENSMUSG00000016257.16_174306860_174314764_1	chr2	-	1229	7	NNC	ENSMUSG00000016257.16	novel	1553	6	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	315.353593429485	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGCAGCTCTTCCCAT	NA	False	NA	-4	True	AATAAA	-45	NA	174314764	174306859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_174307305_174307518_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
ENSMUSG00000016257.16_174306965_174314705_1	chr2	-	1065	7	NNC	ENSMUSG00000016257.16	novel	1553	6	NA	NA	-14	-105	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	315.353593429485	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTTGTGATTTCGC	NA	False	NA	-5	True	AGTAAA	-19	NA	174314705	174306964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_174307305_174307518_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
ENSMUSG00000016257.16_174306965_174314764_1	chr2	-	1338	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	110	105	-37	-105	multi-exon	FALSE	canonical	3	812	junction_2	54.463198583998	2116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTTGTGATTTCGC	NA	False	NA	-5	True	AGTAAA	-19	NA	174314764	174306964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
ENSMUSG00000016257.16_174307124_174314705_1	chr2	-	1120	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	169	264	-14	254	multi-exon	FALSE	canonical	3	812	junction_2	54.463198583998	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTTTGGATTTGGTAC	NA	False	NA	NA	False	TATAAA	-21	NA	174314705	174307123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
ENSMUSG00000016308.13_36138011_36146903_1	chrX	+	693	6	NNC	ENSMUSG00000016308.13	novel	1732	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	358.50991618085	5293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTTCTGTCTTCCC	NA	False	NA	23	True	ATTAAA	-15	NA	36138010	36146903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_36138183_36138363_36138449_36138827_36138846_36145309_36145400_36146251_36146341_36146664
ENSMUSG00000016308.13_36138011_36146903_2	chrX	+	675	5	NNC	ENSMUSG00000016308.13	novel	1732	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	391.813093196233	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTTCTGTCTTCCC	NA	False	NA	23	True	ATTAAA	-15	NA	36138010	36146903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_36138183_36138363_36138449_36145309_36145400_36146251_36146341_36146664
ENSMUSG00000016308.13_36138011_36146903_3	chrX	+	703	5	NNC	ENSMUSG00000016308.13	novel	1732	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	391.813093196233	4063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTTCTGTCTTCCC	NA	False	NA	23	True	ATTAAA	-15	NA	36138010	36146903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_36138183_36138363_36138445_36145277_36145400_36146251_36146341_36146664
ENSMUSG00000016308.13_36138011_36146903_4	chrX	+	668	5	NNC	ENSMUSG00000016308.13	novel	552	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	465.46609704682	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTTCTGTCTTCCC	NA	False	NA	23	True	ATTAAA	-15	NA	36138010	36146903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_36138183_36138370_36138449_36145309_36145400_36146251_36146341_36146664
ENSMUSG00000016308.13_36138011_36146903_5	chrX	+	621	6	NNC	ENSMUSG00000016308.13	novel	1732	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_1	351.534009734478	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTTCTGTCTTCCC	NA	False	NA	23	True	ATTAAA	-15	NA	36138010	36146903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_36138107_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
ENSMUSG00000016319.4_36059304_36062261_1	chrX	+	1041	4	FSM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	0	199	0	55	multi-exon	FALSE	canonical	3	11014	junction_3	650.055895032625	3563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACAGATTCTCTGGGCTT	NA	False	NA	9	True	AATATA	-18	NA	36059303	36062261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36059495_36060495_36060983_36061388_36061530_36062039
ENSMUSG00000016344.15_180829089_180830299_1	chr2	+	846	5	FSM	ENSMUSG00000016344.15	ENSMUST00000016488.13	1160	5	49	265	0	2	multi-exon	TRUE	canonical	3	201	junction_1	270.955139275859	2162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3385	False	NA	3	True	AATAAA	-19	NA	180829088	180830299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180829248_180829342_180829530_180829601_180829680_180829796_180829894_180829974
ENSMUSG00000016344.15_180829089_180830299_2	chr2	+	653	4	NIC	ENSMUSG00000016344.15	novel	689	5	NA	NA	0	2	combination_of_known_splicesites	TRUE	canonical	3	42	junction_2	346.57466727965	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3385	False	NA	3	True	AATAAA	-19	NA	180829088	180830299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_180829248_180829457_180829530_180829796_180829894_180829974
ENSMUSG00000016344.15_180829140_180830299_1	chr2	+	867	4	FSM	ENSMUSG00000016344.15	ENSMUST00000127971.8	1153	4	51	235	0	2	multi-exon	FALSE	canonical	3	201	junction_1	312.789954371229	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3436	False	NA	3	True	AATAAA	-19	NA	180829139	180830299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180829248_180829342_180829680_180829796_180829894_180829974
ENSMUSG00000016481.16_194780967_194813655_1	chr1	-	1397	9	NIC	ENSMUSG00000016481.16	novel	1501	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	81.0361609098062	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGTATCAGGAGTGAG	NA	False	NA	53	True	NA	NA	NA	194813655	194780966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
ENSMUSG00000016481.16_194780967_194813869_1	chr1	-	1611	9	NIC	ENSMUSG00000016481.16	novel	1501	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	81.0361609098062	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGTATCAGGAGTGAG	NA	False	NA	53	True	NA	NA	NA	194813869	194780966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
ENSMUSG00000016481.16_194780967_194813869_2	chr1	-	1297	9	NIC	ENSMUSG00000016481.16	novel	1501	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	78.6018447620665	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGTATCAGGAGTGAG	NA	False	NA	53	True	NA	NA	NA	194813869	194780966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
ENSMUSG00000016481.16_194786104_194813655_1	chr1	-	1431	10	FSM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	214	6	-3	0	multi-exon	FALSE	canonical	3	104	junction_9	54.0893179933677	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTAGGTGTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	194813655	194786103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
ENSMUSG00000016481.16_194786104_194813869_1	chr1	-	1331	10	NIC	ENSMUSG00000016481.16	novel	1651	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_9	50.3432661280975	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTAGGTGTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	194813869	194786103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
ENSMUSG00000016481.16_194811168_194813869_2	chr1	-	941	3	FSM	ENSMUSG00000016481.16	ENSMUST00000193719.2	3859	3	-27	2945	0	334	multi-exon	FALSE	canonical	3	104	junction_2	96	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGACTTTGTGGGAAAGAT	NA	False	NA	NA	False	ATTAAA	-17	NA	194813869	194811167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_194811555_194812137_194812318_194813495
ENSMUSG00000016495.13_29326105_29339248_1	chr19	-	791	6	NNC	ENSMUSG00000016495.13	novel	1012	7	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	21.3410402745508	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAATCATGGCAGTATTC	NA	False	NA	-105	True	AATAAA	-15	NA	29339248	29326104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_29326406_29327759_29327870_29328443_29328575_29335716_29335804_29338216_29338323_29339192
ENSMUSG00000016495.13_29326105_29339248_2	chr19	-	661	5	NIC	ENSMUSG00000016495.13	novel	1012	7	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	17.2825779327044	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAATCATGGCAGTATTC	NA	False	NA	-105	True	AATAAA	-15	NA	29339248	29326104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_29326406_29327759_29327870_29335716_29335804_29338216_29338328_29339196
ENSMUSG00000016503.19_146891739_146900597_1	chr5	+	1722	5	NIC	ENSMUSG00000016503.19	novel	1678	7	NA	NA	4922	8173	intron_retention	FALSE	non_canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTTCCGTAGCAGGCG	NA	False	NA	NA	False	NA	NA	NA	146891738	146900597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_146892626_146893596_146893755_146895634_146896087_146900030_146900191_146900532
ENSMUSG00000016510.12_146891330_146900597_1	chr5	-	1982	4	FSM	ENSMUSG00000016510.12	ENSMUST00000066675.10	4927	4	-2	2947	0	0	multi-exon	FALSE	canonical	3	65	junction_3	27.6445694888204	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTGCATTTGTGCTA	NA	False	NA	2	True	NA	NA	NA	146900597	146891329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900521
ENSMUSG00000016510.12_146891330_146900597_2	chr5	-	1971	4	FSM	ENSMUSG00000016510.12	ENSMUST00000110566.2	1134	4	10	-847	0	0	multi-exon	FALSE	canonical	3	88	junction_3	16.996731711976	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTGCATTTGTGCTA	NA	False	NA	2	True	NA	NA	NA	146900597	146891329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900532
ENSMUSG00000016510.12_146891739_146900597_1	chr5	-	1573	4	FSM	ENSMUSG00000016510.12	ENSMUST00000066675.10	4927	4	-2	3356	0	-409	multi-exon	FALSE	canonical	3	65	junction_3	27.6445694888204	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	146900597	146891738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900521
ENSMUSG00000016510.12_146891739_146900597_2	chr5	-	1733	5	FSM	ENSMUSG00000016510.12	ENSMUST00000110564.8	1257	5	-38	-438	0	-409	multi-exon	FALSE	canonical	3	9	junction_4	53.0023584380922	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	146900597	146891738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900030_146900191_146900521
ENSMUSG00000016510.12_146891739_146900597_3	chr5	-	1562	4	FSM	ENSMUSG00000016510.12	ENSMUST00000110566.2	1134	4	10	-438	0	-409	multi-exon	FALSE	canonical	3	88	junction_3	16.996731711976	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	146900597	146891738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900532
ENSMUSG00000016534.16_37508384_37545298_1	chrX	-	3566	9	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	328.26551753116	1746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATTTGCTCACATTTTT	NA	False	NA	-22	True	AATAAA	-19	NA	37545298	37508383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_37510724_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ENSMUSG00000016534.16_37509985_37545298_1	chrX	-	1970	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	33	1601	-7	-1601	multi-exon	FALSE	canonical	3	893	junction_3	45.9604109533411	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATGTTTCAATCTTTTA	NA	False	NA	NA	False	AATAGA	-35	NA	37545298	37509984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ENSMUSG00000016541.11_85220446_85347093_1	chr15	+	2070	11	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	0	320	0	-320	5prime_fragment	FALSE	canonical	3	1134	junction_3	90.3416293853504	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTGTTTCTGTTTTTT	NA	False	NA	NA	False	AATAGA	-14	NA	85220445	85347093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480
ENSMUSG00000016541.11_85220558_85347266_1	chr15	+	1671	12	NNC	ENSMUSG00000016541.11	novel	1937	12	NA	NA	112	-147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	371.622842664552	3042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACGTTTTCTTTATTTC	NA	False	NA	27	True	AGTAAA	-17	NA	85220557	85347266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_85220775_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ENSMUSG00000016541.11_85220558_85347413_1	chr15	+	1817	12	NNC	ENSMUSG00000016541.11	novel	1937	12	NA	NA	112	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	371.622842664552	4653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGACCCTTGATTGGA	NA	False	NA	25	True	AATAAA	-33	NA	85220557	85347413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_85220782_85243662_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ENSMUSG00000016541.11_85220558_85347413_2	chr15	+	1818	12	NNC	ENSMUSG00000016541.11	novel	1937	12	NA	NA	112	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	371.622842664552	4678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGACCCTTGATTGGA	NA	False	NA	25	True	AATAAA	-33	NA	85220557	85347413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_85220775_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ENSMUSG00000016554.10_77843198_77855013_1	chr15	-	1893	15	NNC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	447.556175929061	8915	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGTCCTGTGCTCCCGTT	2745	False	NA	-11	True	AATAAA	-24	NA	77855013	77843197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_77843317_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ENSMUSG00000016554.10_77843198_77855013_2	chr15	-	1898	15	NNC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	452.831821058619	6121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGTCCTGTGCTCCCGTT	2745	False	NA	-11	True	AATAAA	-24	NA	77855013	77843197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846127_77846635_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ENSMUSG00000016554.10_77846097_77855013_1	chr15	-	1166	11	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	0	2899	0	596	5prime_fragment	FALSE	canonical	3	1461	junction_5	102.418797102876	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGGAGGACGACATGG	2745	False	NA	NA	False	NA	NA	NA	77855013	77846096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ENSMUSG00000016559.15_115913117_115915330_1	chr11	-	1663	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	0	330	0	-330	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	21474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGTGTCAAACCTAAATT	NA	False	NA	-15	True	AATAAA	-14	NA	115915330	115913116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ENSMUSG00000016559.15_115913682_115915330_1	chr11	-	1098	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	0	895	0	337	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	14043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGGTGGGGAGTCTTGT	NA	False	NA	-7	True	ATTAAA	-14	NA	115915330	115913681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ENSMUSG00000016559.15_115913884_115915330_1	chr11	-	896	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	0	1097	0	135	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	8085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGTGTTTAACCATACA	NA	False	NA	NA	False	AATAAA	-17	NA	115915330	115913883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ENSMUSG00000016619.11_84807612_84823939_1	chr15	+	1541	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	0	3225	0	-269	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCGATGAGAAGCAGCCC	NA	False	NA	NA	False	NA	NA	NA	84807611	84823939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ENSMUSG00000016619.11_84807612_84824210_1	chr15	+	1812	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	0	2954	0	2	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTCTCCCTTCCTAAGA	NA	False	NA	25	True	AATAAA	-19	NA	84807611	84824210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ENSMUSG00000016637.8_78043663_78058307_1	chr15	-	1335	7	NIC	ENSMUSG00000016637.8	novel	1013	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	128.12418021418	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGGCTTCTGTTCTTAGT	NA	False	NA	-2	True	AATAAA	-14	NA	78058307	78043662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_78043909_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051652_78052112_78052193_78057968
ENSMUSG00000016637.8_78043663_78058307_2	chr15	-	1011	7	NNC	ENSMUSG00000016637.8	novel	1013	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	104.002270274366	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGGCTTCTGTTCTTAGT	NA	False	NA	-2	True	AATAAA	-14	NA	78058307	78043662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_78043909_78048389_78048500_78049346_78049459_78050169_78050234_78051269_78051330_78052112_78052193_78057968
ENSMUSG00000016664.17_83260323_83348784_1	chr15	-	3155	11	FSM	ENSMUSG00000016664.17	ENSMUST00000171436.8	3693	11	23	515	-13	0	multi-exon	FALSE	canonical	3	507	junction_5	57.2486681067778	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCTTGCATCCACCC	7130	False	NA	0	True	AATAAA	-27	NA	83348784	83260322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
ENSMUSG00000016831.13_52517022_52531969_1	chr14	+	508	4	NNC	ENSMUSG00000016831.13	novel	2997	5	NA	NA	0	-1889	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	270.630539460884	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTTAAATGTGCATTC	NA	False	NA	8	True	AGTAAA	-20	NA	52517021	52531969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_52517114_52517277_52517347_52523116_52523262_52531767
ENSMUSG00000016831.13_52532314_52542581_1	chr14	+	1829	10	NIC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	9123	8723	intron_retention	FALSE	non_canonical	0	0	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGCGAACCAGCCGGAC	NA	False	NA	NA	False	NA	NA	NA	52532313	52542581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52537157_52537563_52537640_52537859_52542344
ENSMUSG00000016831.13_52532314_52542581_2	chr14	+	2010	11	NIC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	9123	8723	intron_retention	FALSE	non_canonical	0	0	junction_1	0	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGCGAACCAGCCGGAC	NA	False	NA	NA	False	NA	NA	NA	52532313	52542581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542339
ENSMUSG00000016833.15_100946615_100952337_1	chr5	+	516	6	FSM	ENSMUSG00000016833.15	ENSMUST00000016977.15	638	6	122	0	2	0	multi-exon	FALSE	canonical	3	1615	junction_5	130.796636042369	5482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTGGAAATGTCTTTC	NA	False	NA	51	True	AATAAA	-33	NA	100946614	100952337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100950918_100950977_100951835_100951896_100952197
ENSMUSG00000016921.15_162773890_162777130_1	chr2	+	1390	5	ISM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	442	1911	309	2	3prime_fragment	FALSE	canonical	3	865	junction_1	54.5361118892794	325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTGCCTTATTGAATA	NA	False	NA	16	True	AATAAA	-14	NA	162773889	162777130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ENSMUSG00000017119.21_101443693_101472777_1	chr11	+	4441	24	FSM	ENSMUSG00000017119.21	ENSMUST00000103098.9	4654	24	213	0	0	0	multi-exon	FALSE	canonical	3	112	junction_17	38.3552196362625	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	987	False	NA	21	True	AATAAA	-24	NA	101443692	101472777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ENSMUSG00000017144.9_51021392_51039122_1	chr2	-	1885	5	FSM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	1	942	0	455	multi-exon	FALSE	canonical	3	429	junction_2	50.2792203599061	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGATAGCGTGATTAAA	NA	False	NA	NA	False	AATAAA	-15	NA	51039122	51021391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038736
ENSMUSG00000017146.13_101398923_101442705_1	chr11	-	4798	15	ISM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	0	19333	0	4414	5prime_fragment	FALSE	canonical	3	272	junction_3	28.4394272165978	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTCCGGAGTGCAGC	NA	False	NA	NA	False	NA	NA	NA	101442705	101398922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ENSMUSG00000017176.18_100320179_100331899_1	chr11	-	1499	8	FSM	ENSMUSG00000017176.18	ENSMUST00000107397.2	1348	8	-145	-6	0	0	multi-exon	FALSE	canonical	3	485	junction_1	42.2470866040561	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACGCGTCTTTAATCCC	NA	False	NA	-2	True	ATTAAA	-19	NA	100331899	100320178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654
ENSMUSG00000017188.4_101168794_101169774_1	chr11	-	719	2	NNC	ENSMUSG00000017188.4	novel	886	2	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGCTAGTGTGTGGGGG	5668	False	NA	-5	True	AATAAA	-20	NA	101169774	101168793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_101169279_101169540
ENSMUSG00000017188.4_101168794_101169774_2	chr11	-	720	2	FSM	ENSMUSG00000017188.4	ENSMUST00000017332.4	886	2	166	0	-5	0	multi-exon	FALSE	canonical	3	1870	junction_1	0	5053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGCTAGTGTGTGGGGG	5668	False	NA	-5	True	AATAAA	-20	NA	101169774	101168793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_101169279_101169539
ENSMUSG00000017210.15_98595417_98620245_1	chr11	-	3385	26	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	29	junction_25	34.6175446847404	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTGTGGGGACAGTT	NA	False	NA	-2	True	AATAAA	-23	NA	98620245	98595416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620206
ENSMUSG00000017210.15_98619332_98620229_1	chr11	-	427	3	ISM	ENSMUSG00000017210.15	ENSMUST00000144048.2	537	4	0	9868	0	-9868	5prime_fragment	FALSE	canonical	3	109	junction_2	21	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATATTACATTTATTTAC	NA	False	NA	NA	False	AATGAA	-1	NA	98620229	98619331	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_98619524_98619610_98619814_98620197
ENSMUSG00000017264.17_148642912_148661268_1	chr4	+	3002	18	ISM	ENSMUSG00000017264.17	ENSMUST00000076022.7	2682	24	-7	5590	0	198	5prime_fragment	FALSE	canonical	3	466	junction_4	46.038196868842	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTTGTATATGTGTAT	NA	False	NA	12	True	AATAAA	-22	NA	148642911	148661268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265
ENSMUSG00000017264.17_148642912_148666291_1	chr4	+	2646	24	ISM	ENSMUSG00000017264.17	ENSMUST00000017408.14	2790	25	26	567	0	-487	5prime_fragment	FALSE	canonical	3	466	junction_4	47.4084532195785	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGGCCTGGCCAGGCA	NA	False	NA	NA	False	NA	NA	NA	148642911	148666291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214
ENSMUSG00000017264.17_148642912_148666858_1	chr4	+	2230	20	NNC	ENSMUSG00000017264.17	novel	2682	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	138.035223735428	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148642911	148666858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660317_148666229_148666292_148666740
ENSMUSG00000017286.16_76111217_76134501_1	chr11	-	2503	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	50	-1119	0	1119	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	16904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGAATAGGTAAACTGCT	NA	False	NA	2	True	NA	NA	NA	76134501	76111216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ENSMUSG00000017286.16_76111467_76134501_1	chr11	-	2253	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	50	-869	0	869	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	16622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCTGTGATCATGGTG	NA	False	NA	NA	False	NA	NA	NA	76134501	76111466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ENSMUSG00000017286.16_76112620_76134501_2	chr11	-	1100	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	50	284	0	0	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGCAAATTCCTACTGT	NA	False	NA	-13	True	AATGAA	-20	NA	76134501	76112619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ENSMUSG00000017307.17_164634688_164646751_1	chr2	-	864	5	NNC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	156.181785109532	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8217	False	NA	-1	True	AATAAA	-19	NA	164646751	164634687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_164634931_164636904_164637100_164637671_164637730_164641639_164641866_164646609
ENSMUSG00000017390.16_78213994_78217586_1	chr11	+	1565	9	FSM	ENSMUSG00000017390.16	ENSMUST00000017534.15	2786	9	200	1021	0	0	multi-exon	FALSE	canonical	3	130	junction_5	18.6547581061776	537	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCGCTCTGTCTGTCTGT	NA	False	NA	18	True	AATAAA	-18	NA	78213993	78217586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78214049_78215215_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760_78216961_78217087
ENSMUSG00000017400.11_97927449_97944181_1	chr11	-	2943	11	FSM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	107	0	107	0	multi-exon	FALSE	canonical	3	31	junction_9	5.98748695196908	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTTGGTGTATC	5466	False	NA	-2	True	ATTAAA	-15	NA	97944181	97927448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
ENSMUSG00000017404.13_97917783_97921318_1	chr11	+	713	6	NNC	ENSMUSG00000017404.13	novel	751	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6207.11551688866	188445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGCTGTGTCTT	NA	False	NA	15	True	AATAAA	-33	NA	97917782	97921318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_97917817_97918648_97918756_97919171_97919295_97920225_97920342_97920600_97920712_97921096
ENSMUSG00000017404.13_97917783_97921318_2	chr11	+	714	6	NNC	ENSMUSG00000017404.13	novel	751	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6298.77421725847	188091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGCTGTGTCTT	NA	False	NA	15	True	AATAAA	-33	NA	97917782	97921318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_97917817_97918648_97918760_97919179_97919295_97920220_97920342_97920600_97920712_97921096
ENSMUSG00000017421.19_80274157_80285202_1	chr11	+	3336	8	ISM	ENSMUSG00000017421.19	ENSMUST00000108216.8	2152	9	0	-93	0	93	intron_retention	FALSE	canonical	3	903	junction_7	56.3451462878932	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCCTGCTTATACACAG	NA	False	NA	NA	False	NA	NA	NA	80274156	80285202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660
ENSMUSG00000017421.19_80274157_80286584_1	chr11	+	1820	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	-66	-192	0	192	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTATGGCTTCTTTTTC	NA	False	NA	22	True	AATAAA	-30	NA	80274156	80286584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ENSMUSG00000017421.19_80274157_80286584_2	chr11	+	1715	11	NNC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	0	192	at_least_one_novel_splicesite	FALSE	canonical	3	172	junction_7	258.380823591845	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTATGGCTTCTTTTTC	NA	False	NA	22	True	AATAAA	-30	NA	80274156	80286584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282216_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ENSMUSG00000017421.19_80274157_80286968_1	chr11	+	2099	11	NNC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	0	-103	intron_retention	FALSE	canonical	3	172	junction_7	258.380823591845	2233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTTTTTATTCATA	NA	False	NA	24	True	AATAAA	-13	NA	80274156	80286968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282216_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ENSMUSG00000017421.19_80274157_80286968_2	chr11	+	2204	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	-66	-576	0	-103	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	1738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTTTTTATTCATA	NA	False	NA	24	True	AATAAA	-13	NA	80274156	80286968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ENSMUSG00000017421.19_80274157_80286968_3	chr11	+	2063	10	NIC	ENSMUSG00000017421.19	novel	2311	11	NA	NA	0	-103	intron_retention	FALSE	canonical	3	18	junction_5	315.175357813455	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTTTTTATTCATA	NA	False	NA	24	True	AATAAA	-13	NA	80274156	80286968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ENSMUSG00000017421.19_80274157_80286968_4	chr11	+	2105	11	NNC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	0	-103	intron_retention	FALSE	canonical	0	0	junction_8	301.180494056305	2527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTTTTTATTCATA	NA	False	NA	24	True	AATAAA	-13	NA	80274156	80286968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285117_80285358_80285927_80286088_80286215
ENSMUSG00000017421.19_80274157_80287074_1	chr11	+	2205	11	NNC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	172	junction_7	258.380823591845	3089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGATACATGATTGAAT	NA	False	NA	130	True	AATAAA	-18	NA	80274156	80287074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282216_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ENSMUSG00000017421.19_80274157_80287074_2	chr11	+	2310	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	-66	-682	0	0	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	2564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGATACATGATTGAAT	NA	False	NA	130	True	AATAAA	-18	NA	80274156	80287074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ENSMUSG00000017428.17_80319472_80362792_1	chr11	+	1539	13	NNC	ENSMUSG00000017428.17	novel	2342	13	NA	NA	0	57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	292.358180243953	2711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAAGCTGTGCTCTCTGC	NA	False	NA	13	True	NA	NA	NA	80319471	80362792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360784_80361451_80361504_80362277_80362421_80362535
ENSMUSG00000017428.17_80319472_80362792_2	chr11	+	1540	14	NNC	ENSMUSG00000017428.17	novel	2848	14	NA	NA	0	57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	282.687231770233	2742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAAGCTGTGCTCTCTGC	NA	False	NA	13	True	NA	NA	NA	80319471	80362792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353441_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ENSMUSG00000017428.17_80319472_80362792_3	chr11	+	1545	14	FSM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	21	1282	0	57	multi-exon	FALSE	canonical	3	918	junction_5	68.6804624122448	2756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAAGCTGTGCTCTCTGC	NA	False	NA	13	True	NA	NA	NA	80319471	80362792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ENSMUSG00000017453.5_77771441_77775381_1	chr11	-	1562	7	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_6	99.5601437434791	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCGGTGGTCTTTATTT	NA	False	NA	-2	True	AATAAA	-22	NA	77775381	77771440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_77772081_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77775238
ENSMUSG00000017453.5_77771441_77784651_1	chr11	-	1727	8	FSM	ENSMUSG00000017453.5	ENSMUST00000017597.5	1998	8	271	0	271	0	multi-exon	FALSE	canonical	3	213	junction_3	30.9654184996286	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCGGTGGTCTTTATTT	NA	False	NA	-2	True	AATAAA	-22	NA	77784651	77771440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_77772081_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
ENSMUSG00000017453.5_77771441_77784651_2	chr11	-	2067	7	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	271	0	intron_retention	FALSE	canonical	3	232	junction_1	25.5304828696121	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCGGTGGTCTTTATTT	NA	False	NA	-2	True	AATAAA	-22	NA	77784651	77771440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_77772081_77772326_77772403_77772943_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
ENSMUSG00000017453.5_77771441_77784651_3	chr11	-	1776	8	NNC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	271	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	95.9908584082838	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCGGTGGTCTTTATTT	NA	False	NA	-2	True	AATAAA	-22	NA	77784651	77771440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_77772130_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
ENSMUSG00000017453.5_77771441_77784651_4	chr11	-	2608	6	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	271	0	intron_retention	FALSE	canonical	3	232	junction_1	26.8223787162884	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCGGTGGTCTTTATTT	NA	False	NA	-2	True	AATAAA	-22	NA	77784651	77771440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_77772081_77772326_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
ENSMUSG00000017499.16_98798675_98812167_1	chr11	+	1971	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	48	2595	0	-120	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGAGTGTTAGCGCTGG	0	True	NA	10	True	AGTAAA	-15	NA	98798674	98812167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
ENSMUSG00000017499.16_98798675_98812382_1	chr11	+	2186	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	48	2380	0	95	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTTCAGTACTTTTCC	0	True	NA	NA	False	TTTAAA	-1	NA	98798674	98812382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
ENSMUSG00000017499.16_98798675_98812719_1	chr11	+	2523	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	48	2043	0	0	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGGGCTGCATTTG	0	True	NA	8	True	AATATA	-17	NA	98798674	98812719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
ENSMUSG00000017550.15_79980226_79986763_1	chr11	+	2220	2	ISM	ENSMUSG00000017550.15	ENSMUST00000017694.7	7272	23	0	39854	0	-12571	5prime_fragment	FALSE	canonical	3	100	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAATCAGCCAGAACATCA	5999	False	NA	NA	False	NA	NA	NA	79980225	79986763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_79980663_79984980
ENSMUSG00000017561.17_79937486_79971768_1	chr11	-	2180	8	FSM	ENSMUSG00000017561.17	ENSMUST00000061283.15	2396	8	49	167	-4	-167	multi-exon	FALSE	canonical	0	0	junction_2	192.168081190846	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGTATTTTTGTAAGAT	4537	False	NA	NA	False	AGTAAA	-21	NA	79971768	79937485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
ENSMUSG00000017615.13_78413676_78427097_1	chr11	-	3707	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	61	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	14.2789666604026	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTGTTCCCTCCATG	NA	False	NA	14	True	NA	NA	NA	78427097	78413675	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
ENSMUSG00000017615.13_78415284_78427097_1	chr11	-	2099	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	61	1608	0	-1608	multi-exon	FALSE	canonical	3	137	junction_6	14.2789666604026	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACACTGATCCCCTC	NA	False	NA	NA	False	NA	NA	NA	78427097	78415283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
ENSMUSG00000017615.13_78415667_78427097_2	chr11	-	1716	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	61	1991	0	-1991	multi-exon	FALSE	canonical	3	137	junction_6	14.2789666604026	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTGTTTTTAAATC	NA	False	NA	NA	False	TTTAAA	-18	NA	78427097	78415666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
ENSMUSG00000017652.17_164897556_164913193_1	chr2	+	1302	9	FSM	ENSMUSG00000017652.17	ENSMUST00000017799.12	2986	9	9	1675	0	273	multi-exon	FALSE	canonical	3	6	junction_1	6.06217782649107	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGACATCTCAGAAACTC	NA	False	NA	NA	False	NA	NA	NA	164897555	164913193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_164897679_164904205_164904285_164904580_164904707_164904941_164905089_164905387_164905482_164908422_164908485_164911548_164911636_164911736_164911769_164912641
ENSMUSG00000017670.17_165131701_165168399_1	chr2	-	2840	21	FSM	ENSMUSG00000017670.17	ENSMUST00000094329.11	3466	21	0	626	0	-626	multi-exon	FALSE	canonical	3	269	junction_20	30.5759300757965	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTCATCCTGGCCAGG	NA	False	NA	NA	False	NA	NA	NA	165168399	165131700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ENSMUSG00000017677.12_79130214_79145495_2	chr11	-	2634	10	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	142.650916403006	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACATTGCCGATATTTC	977	False	NA	-24	True	ATTAAA	-12	NA	79145495	79130213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79134225_79134402_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ENSMUSG00000017677.12_79130214_79145495_3	chr11	-	2622	10	NNC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_4	144.381524757699	868	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACATTGCCGATATTTC	977	False	NA	-24	True	ATTAAA	-12	NA	79145495	79130213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79134237_79134402_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ENSMUSG00000017677.12_79130214_79145495_4	chr11	-	3877	9	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	190	junction_4	93.9730679503442	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACATTGCCGATATTTC	977	False	NA	-24	True	ATTAAA	-12	NA	79145495	79130213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79134402_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ENSMUSG00000017677.12_79130214_79145495_5	chr11	-	2358	10	NNC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	150.950895457782	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACATTGCCGATATTTC	977	False	NA	-24	True	ATTAAA	-12	NA	79145495	79130213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_79130468_79130567_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ENSMUSG00000017686.18_80099910_80143885_1	chr11	+	1712	17	ISM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	-35	13708	0	1022	5prime_fragment	FALSE	canonical	3	482	junction_12	38.1456399048436	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATACTGTGCCAGGAT	NA	False	NA	NA	False	NA	NA	NA	80099909	80143885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792
ENSMUSG00000017686.18_80099910_80157638_1	chr11	+	3013	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	0	674	0	0	multi-exon	FALSE	canonical	3	336	junction_18	65.0695971182841	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099909	80157638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ENSMUSG00000017697.4_163568734_163592159_1	chr2	-	1458	12	FSM	ENSMUSG00000017697.4	ENSMUST00000017841.4	1688	12	0	230	0	-230	multi-exon	FALSE	canonical	3	45	junction_1	12.1526108476007	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCAGCACATGGTGAAT	NA	False	NA	-6	True	AATAAA	-18	NA	163592159	163568733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_163568969_163569463_163569564_163570036_163570167_163571931_163571997_163572217_163572320_163572400_163572473_163573024_163573153_163574176_163574293_163574773_163574918_163577268_163577392_163580082_163580145_163591978
ENSMUSG00000017707.10_163466582_163487045_1	chr2	-	2287	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	6	1390	0	-1390	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTTGTTTGTGTATTT	NA	False	NA	-10	True	ATTAAA	-15	NA	163487045	163466581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
ENSMUSG00000017707.10_163466688_163487045_1	chr2	-	2181	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	6	1496	0	-1496	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGAGTTATGTAATGAT	NA	False	NA	-8	True	ATTAAA	-24	NA	163487045	163466687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
ENSMUSG00000017715.12_117896688_117914837_1	chr11	+	839	4	ISM	ENSMUSG00000017715.12	ENSMUST00000100185.10	1953	8	5067	-86	5067	0	3prime_fragment	FALSE	canonical	1	46	junction_1	137.817109081404	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117896687	117914837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_117896718_117905472_117905549_117910432_117910559_117914230
ENSMUSG00000017715.12_117898895_117914837_1	chr11	+	946	4	NNC	ENSMUSG00000017715.12	novel	3113	3	NA	NA	-4274	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	169.36023408371	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117898894	117914837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_117898955_117905399_117905549_117910432_117910563_117914230
ENSMUSG00000017716.16_117740145_117746558_1	chr11	+	856	5	NNC	ENSMUSG00000017716.16	novel	947	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	860.566383261628	4853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAAGCTCTGTCTGTCT	NA	False	NA	29	True	AATAAA	-18	NA	117740144	117746558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_117740288_117740579_117740690_117743488_117743607_117746050_117746438_117746460
ENSMUSG00000017716.16_117740145_117746558_2	chr11	+	961	5	NNC	ENSMUSG00000017716.16	novel	947	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	981.383334890093	4359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAAGCTCTGTCTGTCT	NA	False	NA	29	True	AATAAA	-18	NA	117740144	117746558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_117740288_117740579_117740690_117743488_117743607_117744287_117744370_117746050
ENSMUSG00000017716.16_117740145_117746558_3	chr11	+	874	4	NNC	ENSMUSG00000017716.16	novel	947	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	982.309862857269	8032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAAGCTCTGTCTGTCT	NA	False	NA	29	True	AATAAA	-18	NA	117740144	117746558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_117740292_117740588_117740690_117743488_117743607_117746050
ENSMUSG00000017716.16_117740145_117746558_4	chr11	+	873	4	NNC	ENSMUSG00000017716.16	novel	947	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	935.4059130785	8488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAAGCTCTGTCTGTCT	NA	False	NA	29	True	AATAAA	-18	NA	117740144	117746558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_117740288_117740579_117740690_117743488_117743607_117746056
ENSMUSG00000017721.16_164339466_164350221_1	chr2	+	2311	13	NNC	ENSMUSG00000017721.16	novel	2611	13	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	51.0299476342623	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGTTGCTTCCTTCCTAA	5138	False	NA	7	True	AATAAA	-16	NA	164339465	164350221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194_164349575_164349799
ENSMUSG00000017721.16_164339466_164350221_2	chr2	+	2312	13	NNC	ENSMUSG00000017721.16	novel	2611	13	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	51.0299476342623	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGTTGCTTCCTTCCTAA	5138	False	NA	7	True	AATAAA	-16	NA	164339465	164350221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194_164349527_164349750
ENSMUSG00000017721.16_164339466_164350221_3	chr2	+	2311	13	NNC	ENSMUSG00000017721.16	novel	2611	13	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	51.0299476342623	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGTTGCTTCCTTCCTAA	5138	False	NA	7	True	AATAAA	-16	NA	164339465	164350221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194_164349511_164349735
ENSMUSG00000017723.12_164404499_164410430_1	chr2	+	705	4	NIC	ENSMUSG00000017723.12	novel	849	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	229.843908386153	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCTTGCCTCACTTTC	113	False	NA	26	True	AATAAA	-32	NA	164404498	164410430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_164404725_164405976_164406133_164407711_164407859_164410254
ENSMUSG00000017723.12_164404634_164410430_1	chr2	+	570	4	NIC	ENSMUSG00000017723.12	novel	849	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	229.843908386153	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCTTGCCTCACTTTC	248	False	NA	26	True	AATAAA	-32	NA	164404633	164410430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_164404725_164405976_164406133_164407711_164407859_164410254
ENSMUSG00000017723.12_164404634_164410430_2	chr2	+	756	6	NNC	ENSMUSG00000017723.12	novel	849	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_4	216.583101833915	3028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCTTGCCTCACTTTC	248	False	NA	26	True	AATAAA	-32	NA	164404633	164410430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_164404725_164405227_164405372_164405976_164406133_164407711_164407859_164409269_164409312_164410254
ENSMUSG00000017723.12_164404634_164410430_3	chr2	+	714	5	FSM	ENSMUSG00000017723.12	ENSMUST00000017867.10	849	5	135	0	0	0	multi-exon	FALSE	canonical	3	478	junction_3	30.4251129825347	3332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCTTGCCTCACTTTC	248	False	NA	26	True	AATAAA	-32	NA	164404633	164410430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_164404725_164405227_164405372_164405976_164406133_164407711_164407859_164410254
ENSMUSG00000017754.14_164675727_164681501_1	chr2	-	1779	14	NIC	ENSMUSG00000017754.14	novel	2226	15	NA	NA	17215	5711	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTCATGTGTAGCTCT	NA	False	NA	NA	False	NA	NA	NA	164681501	164675726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_164675913_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ENSMUSG00000017754.14_164675727_164681501_2	chr2	-	1905	14	NIC	ENSMUSG00000017754.14	novel	2226	15	NA	NA	17215	5711	intron_retention	FALSE	non_canonical	0	0	junction_1	0	2258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTCATGTGTAGCTCT	NA	False	NA	NA	False	NA	NA	NA	164681501	164675726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_164675771_164675949_164676129_164676239_164676352_164676617_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ENSMUSG00000017754.14_164681438_164699564_1	chr2	-	1748	16	NNC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	97.466894664576	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	False	NA	-1	True	NA	NA	NA	164699564	164681437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696179_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503
ENSMUSG00000017756.10_73911826_73963525_1	chr13	+	3784	24	FSM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	10	1348	0	418	multi-exon	FALSE	canonical	3	635	junction_9	57.8026758755535	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTTCCTTGGGTCTAGA	NA	False	NA	NA	False	GATAAA	-21	NA	73911825	73963525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ENSMUSG00000017756.10_73911826_73964043_1	chr13	+	4302	24	FSM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	10	830	0	-818	multi-exon	FALSE	canonical	3	635	junction_9	57.8026758755535	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCACCCTCCTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	73911825	73964043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ENSMUSG00000017760.17_164675727_164681501_1	chr2	+	1816	15	ISM	ENSMUSG00000017760.17	ENSMUST00000103092.9	3646	16	906	1451	0	-438	3prime_fragment	FALSE	canonical	3	800	junction_1	78.7051135439063	2550	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGGGCTCTTCTCTGTG	NA	False	NA	15	True	ATTAAA	-15	NA	164675726	164681501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ENSMUSG00000017760.17_164675727_164681501_2	chr2	+	1810	15	NNC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	0	-438	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	272.62244955249	2385	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGGGCTCTTCTCTGTG	NA	False	NA	15	True	ATTAAA	-15	NA	164675726	164681501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679411_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ENSMUSG00000017760.17_164681438_164698483_1	chr2	+	1568	14	NNC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	2336	15531	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTTTACCTAGTAGCC	NA	False	NA	NA	False	NA	NA	NA	164681437	164698483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698385
ENSMUSG00000017760.17_164681438_164699462_1	chr2	+	1706	16	NNC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	2336	16510	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGGGTCTGGGGATGCGA	NA	False	NA	NA	False	NA	NA	NA	164681437	164699462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699437
ENSMUSG00000017760.17_164681438_164699564_1	chr2	+	1737	16	NNC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	2336	16612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1921	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTAGCGCGGGTCCAGCAG	NA	False	NA	NA	False	NA	NA	NA	164681437	164699564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698719_164698806_164698918_164699503
ENSMUSG00000017760.17_164681438_164699564_2	chr2	+	1808	16	NNC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	2336	16612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTAGCGCGGGTCCAGCAG	NA	False	NA	NA	False	NA	NA	NA	164681437	164699564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699437
ENSMUSG00000017760.17_164681438_164699564_3	chr2	+	1781	16	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	2336	16612	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTAGCGCGGGTCCAGCAG	NA	False	NA	NA	False	NA	NA	NA	164681437	164699564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699464
ENSMUSG00000017778.15_86192935_86194909_1	chr13	-	426	3	FSM	ENSMUSG00000017778.15	ENSMUST00000131011.2	540	3	114	0	-16	0	multi-exon	FALSE	canonical	3	10515	junction_1	2196	91591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGCCTCGTCTCTGCA	NA	False	NA	-14	True	AATAAA	-16	NA	86194909	86192934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_86193028_86193845_86193989_86194719
ENSMUSG00000017801.16_100978130_100982349_1	chr11	+	1115	8	FSM	ENSMUSG00000017801.16	ENSMUST00000107302.8	1826	8	27	684	0	5	multi-exon	FALSE	canonical	0	0	junction_1	91.1912097446562	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGCTTGGTCTCTTG	8250	False	NA	11	True	NA	NA	NA	100978129	100982349	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100978194_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUSG00000017801.16_100978130_100982713_1	chr11	+	1479	8	FSM	ENSMUSG00000017801.16	ENSMUST00000107302.8	1826	8	27	320	0	-320	multi-exon	FALSE	canonical	0	0	junction_1	91.1912097446562	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGCAGACCTCCAAAG	8250	False	NA	NA	False	NA	NA	NA	100978129	100982713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100978194_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUSG00000017801.16_100982983_100986226_1	chr11	+	914	8	NNC	ENSMUSG00000017801.16	novel	1826	8	NA	NA	2495	3193	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGACTGGTCGGTTGC	NA	False	NA	NA	False	NA	NA	NA	100982982	100986226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985845_100985983_100986085_100986168
ENSMUSG00000017801.16_100982983_100986226_2	chr11	+	915	8	NNC	ENSMUSG00000017801.16	novel	1826	8	NA	NA	2495	3193	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGACTGGTCGGTTGC	NA	False	NA	NA	False	NA	NA	NA	100982982	100986226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984613_100985761_100985852_100985983_100986085_100986168
ENSMUSG00000017802.15_100987936_101010669_2	chr11	-	2518	9	FSM	ENSMUSG00000017802.15	ENSMUST00000017946.6	3165	9	50	597	0	-597	multi-exon	FALSE	canonical	3	80	junction_5	11.6162601554889	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCTCAAGCCAAATTCTT	9845	False	NA	NA	False	NA	NA	NA	101010669	100987935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
ENSMUSG00000017831.9_53790855_53814708_1	chr17	+	1985	5	ISM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	4593	0	4540	0	3prime_fragment	FALSE	canonical	3	878	junction_3	37.2625817677734	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGAGTTTTCTCTGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	53790854	53814708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ENSMUSG00000017831.9_53790983_53814708_1	chr17	+	1857	5	ISM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	4721	0	4668	0	3prime_fragment	FALSE	canonical	3	878	junction_3	37.2625817677734	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGAGTTTTCTCTGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	53790982	53814708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ENSMUSG00000017837.13_100513702_100517243_1	chr11	+	907	4	FSM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	0	1190	0	1	multi-exon	FALSE	canonical	3	328	junction_1	10.0332779621949	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGGCCCTCCCTTGACC	NA	False	NA	NA	False	NA	NA	NA	100513701	100517243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100513835_100515017_100515126_100515768_100516011_100516819
ENSMUSG00000017837.13_100513774_100518433_1	chr11	+	1933	5	NIC	ENSMUSG00000017837.13	novel	988	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_3	123.71413621733	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCCGTCCCCTACCCCT	NA	False	NA	17	True	AATAAA	-24	NA	100513773	100518433	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_100513835_100515017_100515126_100515768_100515843_100515934_100516011_100516819
ENSMUSG00000017843.15_110450404_110537347_1	chr12	+	1688	12	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	-1768	2	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_1	278.776903604784	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTCTTGTATAAGTACT	3152	False	NA	15	True	AATAAA	-20	NA	110450403	110537347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_110450715_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ENSMUSG00000017843.15_110452173_110538124_1	chr12	+	1939	13	NNC	ENSMUSG00000017843.15	novel	4108	13	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_12	268.830130173106	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTATTTTCCTATG	4921	False	NA	16	True	AATAAA	-18	NA	110452172	110538124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110537631
ENSMUSG00000017843.15_110464055_110537347_1	chr12	+	1542	12	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	11762	2	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_1	282.435306715253	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTCTTGTATAAGTACT	129	False	NA	15	True	AATAAA	-20	NA	110464054	110537347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_110464220_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ENSMUSG00000017858.13_162859411_162875483_1	chr2	+	1080	9	ISM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	137	12578	0	2293	5prime_fragment	FALSE	canonical	3	222	junction_1	43.5026938821034	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGTTGGAAGAAATTAGC	NA	False	NA	NA	False	NA	NA	NA	162859410	162875483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154
ENSMUSG00000017858.13_162859411_162887813_1	chr2	+	1863	13	FSM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	137	248	0	-248	multi-exon	FALSE	canonical	3	222	junction_1	53.5787971122906	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCTCATCTGGAACAT	NA	False	NA	8	True	AATAAA	-16	NA	162859410	162887813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ENSMUSG00000017858.13_162859411_162888061_1	chr2	+	1981	12	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	106.160567612002	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162859410	162888061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_162859454_162864294_162864420_162865269_162865358_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ENSMUSG00000017858.13_162859411_162888061_2	chr2	+	2111	13	FSM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	137	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	53.5787971122906	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162859410	162888061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ENSMUSG00000017858.13_162873943_162888061_1	chr2	+	1573	6	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9580	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	144.162963343572	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162873942	162888061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_162874156_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ENSMUSG00000017858.13_162873943_162888061_2	chr2	+	1418	5	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9580	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	186.483745940497	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162873942	162888061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_162874156_162875154_162875224_162882546_162882635_162884610_162884720_162887122
ENSMUSG00000017858.13_162874206_162888061_1	chr2	+	1335	5	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9843	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	192.264141222434	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162874205	162888061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_162874336_162875154_162875224_162882546_162882635_162884610_162884720_162887122
ENSMUSG00000017858.13_162874237_162888061_1	chr2	+	1459	6	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9874	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	153.088993725872	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162874236	162888061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_162874336_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ENSMUSG00000017861.12_162896607_162922732_1	chr2	+	1923	12	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	0	33	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	865.932402454045	1325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCCTTGGTAAGGGGCT	NA	False	NA	NA	False	NA	NA	NA	162896606	162922732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_162896724_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637
ENSMUSG00000017861.12_162901098_162925568_1	chr2	+	2529	14	NNC	ENSMUSG00000017861.12	novel	789	7	NA	NA	-171	949	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	819.254105843131	4066	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAAATGCCATTCTCC	NA	False	NA	NA	False	NA	NA	NA	162901097	162925568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_162901178_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ENSMUSG00000017861.12_162911414_162925594_1	chr2	+	1953	9	NNC	ENSMUSG00000017861.12	novel	789	7	NA	NA	1282	975	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1027.57554466813	3413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162911413	162925594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_162911532_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ENSMUSG00000017868.17_162841126_162856047_1	chr2	+	1623	5	ISM	ENSMUSG00000017868.17	ENSMUST00000018012.14	2693	14	11876	0	1094	0	3prime_fragment	FALSE	canonical	3	12	junction_3	4.54835134966506	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTACTGGGTATGGTTG	NA	False	NA	14	True	ATTAAA	-15	NA	162841125	162856047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_162841189_162845191_162845288_162846066_162846223_162848713_162848804_162854829
ENSMUSG00000017969.14_167045114_167063280_1	chr2	-	1112	6	ISM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	19244	287	-12944	-287	3prime_fragment	FALSE	canonical	3	46	junction_5	14.8404851672713	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCTTCCAAATCGGGC	NA	False	NA	-31	True	AATAAA	-22	NA	167063280	167045113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128
ENSMUSG00000017969.14_167045114_167063284_1	chr2	-	934	5	NIC	ENSMUSG00000017969.14	novel	2107	10	NA	NA	-12948	-287	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	34.8164831653055	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCTTCCAAATCGGGC	NA	False	NA	-31	True	AATAAA	-22	NA	167063284	167045113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167063128
ENSMUSG00000017999.17_166857230_166867733_1	chr2	+	1918	9	NNC	ENSMUSG00000017999.17	novel	2151	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_8	237.315191254163	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATAGTATTATTTCCCAT	NA	False	NA	NA	False	NA	NA	NA	166857229	166867733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166866710
ENSMUSG00000017999.17_166857230_166876681_1	chr2	+	2411	21	FSM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	117	186	0	-142	multi-exon	FALSE	canonical	3	666	junction_12	71.8993045863449	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTGGAGAGATGGCTCA	NA	False	NA	NA	False	TATAAA	-12	NA	166857229	166876681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ENSMUSG00000017999.17_166857230_166876867_1	chr2	+	2597	21	FSM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	117	0	0	0	multi-exon	FALSE	canonical	3	666	junction_12	71.8993045863449	1929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCTGTTGTCTGTGAAT	NA	False	NA	NA	False	NA	NA	NA	166857229	166876867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ENSMUSG00000017999.17_166857230_166876867_2	chr2	+	2864	20	NIC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	666	junction_11	73.1547140542949	1927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCTGTTGTCTGTGAAT	NA	False	NA	NA	False	NA	NA	NA	166857229	166876867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ENSMUSG00000018012.12_120613041_120614795_1	chr11	+	920	5	FSM	ENSMUSG00000018012.12	ENSMUST00000134322.2	717	5	201	-404	201	0	multi-exon	FALSE	canonical	3	54	junction_2	3.80788655293195	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCGCTGTCTGCCC	4543	False	NA	14	True	AATAAA	-14	NA	120613040	120614795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
ENSMUSG00000018040.10_83000049_83006952_1	chr15	-	1870	8	NNC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	323.560863908263	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCTCTCCTGAGCT	NA	False	NA	NA	False	AATAAA	-13	NA	83006952	83000048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_83000335_83000362_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
ENSMUSG00000018040.10_83000049_83006952_2	chr15	-	1871	8	NNC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	323.560863908263	619	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCTCTCCTGAGCT	NA	False	NA	NA	False	AATAAA	-13	NA	83006952	83000048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_83000334_83000360_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
ENSMUSG00000018040.10_83000049_83006952_3	chr15	-	1869	8	NNC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	308.297828439333	467	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCTCTCCTGAGCT	NA	False	NA	NA	False	AATAAA	-13	NA	83006952	83000048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_83000330_83000355_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004216_83006032_83006176_83006862
ENSMUSG00000018040.10_83000049_83006952_4	chr15	-	1872	8	NNC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	832	junction_4	68.5907710814729	848	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCTCTCCTGAGCT	NA	False	NA	NA	False	AATAAA	-13	NA	83006952	83000048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_83000330_83000355_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
ENSMUSG00000018042.19_83037695_83045801_1	chr15	-	1715	6	NNC	ENSMUSG00000018042.19	novel	1982	9	NA	NA	8577	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_5	616.282922041492	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCAGCGTTTCTCTGGG	7080	False	NA	0	True	AGTAAA	-18	NA	83045801	83037694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83045715
ENSMUSG00000018042.19_83037695_83056403_1	chr15	-	2027	9	NNC	ENSMUSG00000018042.19	novel	2422	9	NA	NA	390	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	543.189984604834	3257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCAGCGTTTCTCTGGG	NA	False	NA	0	True	AGTAAA	-18	NA	83056403	83037694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044618_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ENSMUSG00000018042.19_83037695_83056403_2	chr15	-	2010	10	NNC	ENSMUSG00000018042.19	novel	2422	9	NA	NA	390	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	514.932238140654	3436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCAGCGTTTCTCTGGG	NA	False	NA	0	True	AGTAAA	-18	NA	83056403	83037694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_83038424_83038445_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ENSMUSG00000018042.19_83037695_83056403_3	chr15	-	2032	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	390	0	390	0	multi-exon	FALSE	canonical	3	1513	junction_1	61.7454451761423	3717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCAGCGTTTCTCTGGG	NA	False	NA	0	True	AGTAAA	-18	NA	83056403	83037694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ENSMUSG00000018042.19_83037865_83056403_1	chr15	-	1862	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	390	170	390	-170	multi-exon	FALSE	canonical	3	1513	junction_1	61.7454451761423	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCTGGTCCCCAGC	NA	False	NA	NA	False	NA	NA	NA	83056403	83037864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ENSMUSG00000018042.19_83038451_83056403_1	chr15	-	1276	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	390	756	390	-756	multi-exon	FALSE	canonical	3	1513	junction_1	61.7454451761423	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	NA	False	NA	-70	True	NA	NA	NA	83056403	83038450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ENSMUSG00000018068.14_86123966_86148391_1	chr11	-	2194	14	ISM	ENSMUSG00000018068.14	ENSMUST00000018212.13	5906	25	-15	22459	0	1532	5prime_fragment	FALSE	canonical	3	118	junction_13	21.4067400766688	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAACCAGCCGGTCACTGA	NA	False	NA	NA	False	CATAAA	-41	NA	86148391	86123965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029
ENSMUSG00000018102.6_23868182_23876471_1	chr13	+	736	2	FSM	ENSMUSG00000018102.6	ENSMUST00000018246.6	1156	2	0	420	0	-420	multi-exon	FALSE	canonical	3	53	junction_1	0	2294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTCATGTTATATCACGT	183	False	NA	NA	False	NA	NA	NA	23868181	23876471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_23868605_23876158
ENSMUSG00000018160.16_98042981_98084119_1	chr11	-	2821	18	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_1	56.1624559050546	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTCTGTGTTTTTTA	NA	False	NA	NA	False	AATAAA	-41	NA	98084119	98042980	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_98043952_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ENSMUSG00000018160.16_98051316_98084119_1	chr11	-	2156	16	ISM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	0	8335	0	-2737	5prime_fragment	FALSE	canonical	3	176	junction_2	32.5798847279865	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACTGTTGCCTCCATA	NA	False	NA	NA	False	AATAAA	-18	NA	98084119	98051315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ENSMUSG00000018171.10_86475519_86512133_1	chr11	-	1182	6	NNC	ENSMUSG00000018171.10	novel	2787	12	NA	NA	-19012	237	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_5	277.055517902098	452	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCCGTTTTCTTTAGT	NA	False	NA	0	True	TATAAA	-23	NA	86512133	86475518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86512073
ENSMUSG00000018189.13_143653043_143682679_1	chr1	+	1289	11	NNC	ENSMUSG00000018189.13	novel	1845	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	422.471833380641	2819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCCATTCTTCAATTC	NA	False	NA	25	True	NA	NA	NA	143653042	143682679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143682428
ENSMUSG00000018189.13_143653043_143682679_2	chr1	+	1293	11	NNC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	400.593921571459	2511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCCATTCTTCAATTC	NA	False	NA	25	True	NA	NA	NA	143653042	143682679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670226_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
ENSMUSG00000018196.19_143615348_143622514_1	chr1	+	659	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	53	2625	0	0	multi-exon	FALSE	canonical	3	459	junction_1	59.84981202978	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGATTGGCCAGTTTT	NA	False	NA	31	True	AATAAA	-18	NA	143615347	143622514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
ENSMUSG00000018239.10_53215506_53224128_1	chr11	+	1322	5	NNC	ENSMUSG00000018239.10	novel	1267	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	135.234980681775	1060	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGATGTAAGTTTCAAGT	NA	False	NA	14	True	TATAAA	-27	NA	53215505	53224128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_53215569_53218095_53218255_53221513_53221559_53222474_53222530_53223128
ENSMUSG00000018286.7_70416193_70418479_1	chr11	+	708	6	NNC	ENSMUSG00000018286.7	novel	798	6	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2427.25512462123	3801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTGTGTGAAGGTTCT	NA	False	NA	27	True	AATAAA	-17	NA	70416192	70418479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_70416255_70416756_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
ENSMUSG00000018286.7_70416193_70418479_2	chr11	+	672	5	NNC	ENSMUSG00000018286.7	novel	798	6	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2661.5505349326	2995	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTGTGTGAAGGTTCT	NA	False	NA	27	True	AATAAA	-17	NA	70416192	70418479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_70416241_70417119_70417252_70417369_70417500_70418004_70418150_70418262
ENSMUSG00000018286.7_70416193_70418684_1	chr11	+	1026	6	FSM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	-19	-209	0	0	multi-exon	FALSE	canonical	3	5742	junction_5	304.149305440601	22452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTTCTGCCTGCAT	NA	False	NA	17	True	AATAAA	-18	NA	70416192	70418684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
ENSMUSG00000018287.13_70554597_70560120_1	chr11	-	1011	8	NNC	ENSMUSG00000018287.13	novel	1159	7	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	277.465423475592	4308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATGTGGATACTAGTCC	NA	False	NA	-9	True	AATAAA	-33	NA	70560120	70554596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_70554714_70554739_70555047_70555145_70555303_70555403_70555494_70555608_70555694_70555813_70555903_70556122_70556191_70560022
ENSMUSG00000018287.13_70554597_70560120_4	chr11	-	1007	7	NIC	ENSMUSG00000018287.13	novel	1159	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	296.921239089127	4041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATGTGGATACTAGTCC	NA	False	NA	-9	True	AATAAA	-33	NA	70560120	70554596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_70555047_70555145_70555303_70555403_70555494_70555608_70555694_70555813_70555873_70556122_70556191_70560022
ENSMUSG00000018287.13_70554597_70560120_5	chr11	-	1032	7	NNC	ENSMUSG00000018287.13	novel	1159	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	296.481824438231	4292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATGTGGATACTAGTCC	NA	False	NA	-9	True	AATAAA	-33	NA	70560120	70554596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_70555047_70555145_70555291_70555396_70555494_70555608_70555694_70555813_70555903_70556122_70556191_70560022
ENSMUSG00000018326.10_163837123_163858733_1	chr2	+	995	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	243	1775	243	1530	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGACTTTCGATTTTTCA	NA	False	NA	7	True	GATAAA	-19	NA	163837122	163858733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ENSMUSG00000018326.10_163837123_163859304_1	chr2	+	1566	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	243	1204	243	-1204	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTGTGTGACTAAACCC	NA	False	NA	16	True	AATAAA	-20	NA	163837122	163859304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ENSMUSG00000018326.10_163837123_163860508_1	chr2	+	2770	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	243	0	243	0	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTGTGGATTGATGTG	NA	False	NA	21	True	AATAAA	-16	NA	163837122	163860508	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ENSMUSG00000018339.13_54793752_54801203_1	chr11	+	1440	5	FSM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	154	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	9.98436277385793	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGCCTACTTGGAATTT	NA	False	NA	9	True	AGTAAA	-16	NA	54793751	54801203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_54793879_54797952_54798107_54799366_54799485_54799865_54799966_54800262
ENSMUSG00000018347.17_65698070_65719850_1	chr11	+	1987	7	FSM	ENSMUSG00000018347.17	ENSMUST00000071465.9	2270	7	69	214	0	-214	multi-exon	FALSE	canonical	3	32	junction_5	5.11262055005932	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCCTCCTATTTTGGAC	NA	False	NA	19	True	AATAAA	-20	NA	65698069	65719850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713650_65713765_65718867
ENSMUSG00000018362.15_106879455_106890290_1	chr11	-	1956	11	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	138	junction_10	946.562882221778	4921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTTTTCTTAATTGA	9743	False	NA	NA	False	AATAAA	-27	NA	106890290	106879454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888141_106890184
ENSMUSG00000018362.15_106879455_106890290_2	chr11	-	1971	11	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	67	junction_1	940.447553029939	7010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTTTTCTTAATTGA	9743	False	NA	NA	False	AATAAA	-27	NA	106890290	106879454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106879800_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ENSMUSG00000018362.15_106879455_106890290_3	chr11	-	1970	11	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	979.498973965772	4363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTTTTCTTAATTGA	9743	False	NA	NA	False	AATAAA	-27	NA	106890290	106879454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882938_106883420_106883518_106887334_106887473_106888063_106888162_106890184
ENSMUSG00000018362.15_106879455_106890290_4	chr11	-	1974	11	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	976.649599395812	7134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTTTTCTTAATTGA	9743	False	NA	NA	False	AATAAA	-27	NA	106890290	106879454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106879806_106880149_106880293_106881010_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ENSMUSG00000018379.18_87938544_87942440_1	chr11	+	160	2	NNC	ENSMUSG00000018379.18	novel	2948	3	NA	NA	0	124	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTCTCTGTTGTGGAA	6595	False	NA	13	True	AATAAA	-4	NA	87938543	87942440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_87938602_87942338
ENSMUSG00000018379.18_87939961_87942317_1	chr11	+	2161	2	ISM	ENSMUSG00000018379.18	ENSMUST00000107920.10	1209	5	1332	-1081	-277	1	intron_retention	FALSE	canonical	3	1111	junction_1	0	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCATGGTTGTCCTTTTT	8012	False	NA	22	True	AATAAA	-16	NA	87939960	87942317	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_87940042_87940237
ENSMUSG00000018379.18_87940819_87942316_1	chr11	+	617	2	FSM	ENSMUSG00000018379.18	ENSMUST00000132983.3	759	2	581	-439	581	0	multi-exon	FALSE	canonical	3	275	junction_1	0	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCATGGTTGTCCTTTT	8870	False	NA	21	True	AATAAA	-15	NA	87940818	87942316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_87940922_87941802
ENSMUSG00000018405.8_84703887_84710341_1	chr11	-	2164	5	NNC	ENSMUSG00000018405.8	novel	2477	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	41.1035278291292	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTGGAGTTGATTTGT	NA	False	NA	-4	True	AATAAA	-23	NA	84710341	84703886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425_84709520_84709975
ENSMUSG00000018411.18_104122310_104219275_1	chr11	+	1452	9	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	0	14	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	204.655045136933	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGTAAAAACATGGCCAAA	NA	False	NA	19	True	AATAAA	-23	NA	104122309	104219275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_104122434_104173193_104173307_104193186_104193237_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018411.18_104122310_104219275_2	chr11	+	1518	10	FSM	ENSMUSG00000018411.18	ENSMUST00000106992.10	5253	10	94	3641	0	14	multi-exon	FALSE	canonical	3	21	junction_2	196.187551989303	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGTAAAAACATGGCCAAA	NA	False	NA	19	True	AATAAA	-23	NA	104122309	104219275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_104122434_104173193_104173307_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018411.18_104122310_104219275_3	chr11	+	1359	8	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	0	14	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	225.97661067338	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGTAAAAACATGGCCAAA	NA	False	NA	19	True	AATAAA	-23	NA	104122309	104219275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_104122434_104173193_104173307_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018411.18_104178152_104219275_1	chr11	+	1248	8	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4945	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	224.853421642833	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGTAAAAACATGGCCAAA	NA	False	NA	19	True	AATAAA	-23	NA	104178151	104219275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_104178212_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018411.18_104200495_104219275_1	chr11	+	1049	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8364	14	at_least_one_novel_splicesite	FALSE	canonical	3	288	junction_1	100.158312186258	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGTAAAAACATGGCCAAA	9492	False	NA	19	True	AATAAA	-23	NA	104200494	104219275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_104200605_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018411.18_104200495_104219275_2	chr11	+	995	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8364	14	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	201.516128386787	804	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGTAAAAACATGGCCAAA	9492	False	NA	19	True	AATAAA	-23	NA	104200494	104219275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_104200551_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018411.18_104200699_104219275_1	chr11	+	1181	6	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	-8160	14	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	222.439744650096	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGTAAAAACATGGCCAAA	9696	False	NA	19	True	AATAAA	-23	NA	104200698	104219275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_104200848_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018411.18_104200699_104219275_2	chr11	+	1088	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8160	14	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	186.526640188473	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGTAAAAACATGGCCAAA	9696	False	NA	19	True	AATAAA	-23	NA	104200698	104219275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_104200848_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018417.15_51788924_51955107_1	chr1	-	5016	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	-20	-229	-7	0	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCGAAGTCTTCGTGTT	NA	False	NA	16	True	GATAAA	-5	NA	51955107	51788923	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ENSMUSG00000018417.15_51790183_51955107_1	chr1	-	3757	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	-20	1030	-7	-1030	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTAATTATCAGAATAGT	NA	False	NA	-14	True	ATTAAA	-17	NA	51955107	51790182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ENSMUSG00000018425.19_86660575_86698437_1	chr11	-	2770	18	NNC	ENSMUSG00000018425.19	novel	3813	18	NA	NA	135	-903	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	42.7742929621087	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCAAGGCCTTCTTAT	8662	False	NA	-5	True	ATTAAA	-17	NA	86698437	86660574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697449_86698263
ENSMUSG00000018427.9_86830921_86884551_1	chr11	-	1195	5	FSM	ENSMUSG00000018427.9	ENSMUST00000018571.5	4847	5	-18	3670	-18	504	multi-exon	FALSE	canonical	3	55	junction_1	6.94172168845741	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTCGTGGCTTTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	86884551	86830920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862949_86884417
ENSMUSG00000018428.16_88736105_88755412_1	chr11	-	777	2	ISM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	0	14487	0	-6307	5prime_fragment	FALSE	canonical	3	913	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGACAGGTGGGACAGAG	NA	False	NA	NA	False	NA	NA	NA	88755412	88736104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_88736692_88755222
ENSMUSG00000018433.15_107057489_107080178_1	chr11	-	3129	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	29	0	0	0	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGAAAATGTCTCTC	1130	False	NA	NA	False	TATAAA	-12	NA	107080178	107057488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ENSMUSG00000018433.15_107057753_107080178_1	chr11	-	2865	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	29	264	0	-264	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGCAAAACATCTCTG	1130	False	NA	NA	False	NA	NA	NA	107080178	107057752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ENSMUSG00000018433.15_107058015_107080178_1	chr11	-	2603	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	29	526	0	171	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACGTATTTGTGTCTAA	1130	False	NA	-34	True	TTTAAA	-23	NA	107080178	107058014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ENSMUSG00000018442.14_70900759_70910069_1	chr11	-	1115	7	FSM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	60	2491	0	0	multi-exon	FALSE	canonical	3	526	junction_4	25.493463214453	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTATTTAAGCTTTCG	NA	False	NA	-9	True	AATAAA	-20	NA	70910069	70900758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
ENSMUSG00000018442.14_70900759_70910069_2	chr11	-	1150	7	NIC	ENSMUSG00000018442.14	novel	1466	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	209.920619917784	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTATTTAAGCTTTCG	NA	False	NA	-9	True	AATAAA	-20	NA	70910069	70900758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909934
ENSMUSG00000018446.9_70868674_70873833_1	chr11	-	517	2	NNC	ENSMUSG00000018446.9	novel	703	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAAGTTGAGGTTCTTT	NA	False	NA	-38	True	AATAAA	-20	NA	70873833	70868673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_70869071_70873713
ENSMUSG00000018449.13_70861312_70868628_1	chr11	+	543	5	NIC	ENSMUSG00000018449.13	novel	548	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	157.733953225043	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861311	70868628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864894_70864959_70868483
ENSMUSG00000018449.13_70861312_70868628_2	chr11	+	702	7	FSM	ENSMUSG00000018449.13	ENSMUST00000178822.8	566	7	-21	-115	0	1	multi-exon	FALSE	canonical	3	5	junction_5	117.134419459962	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861311	70868628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865819_70865867_70868483
ENSMUSG00000018449.13_70861312_70868628_3	chr11	+	479	4	FSM	ENSMUSG00000018449.13	ENSMUST00000169965.8	343	4	-21	-115	0	1	multi-exon	FALSE	canonical	3	26	junction_3	151.702193641211	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861311	70868628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70868483
ENSMUSG00000018449.13_70861312_70868628_4	chr11	+	655	6	FSM	ENSMUSG00000018449.13	ENSMUST00000167509.2	519	6	-21	-115	0	1	multi-exon	FALSE	canonical	3	23	junction_5	118.829962551538	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861311	70868628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70868483
ENSMUSG00000018449.13_70861312_70868628_5	chr11	+	796	7	FSM	ENSMUSG00000018449.13	ENSMUST00000018593.10	1100	7	273	31	0	1	multi-exon	FALSE	canonical	3	224	junction_4	48.3922055248111	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861311	70868628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865725_70865867_70868483
ENSMUSG00000018449.13_70861312_70868628_6	chr11	+	1563	6	NIC	ENSMUSG00000018449.13	novel	1100	7	NA	NA	0	1	intron_retention	FALSE	canonical	3	224	junction_4	52.6748516846512	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861311	70868628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70865867_70868483
ENSMUSG00000018449.13_70861312_70868628_7	chr11	+	1451	5	NIC	ENSMUSG00000018449.13	novel	548	6	NA	NA	0	1	intron_retention	FALSE	canonical	3	39	junction_3	128.657248144051	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861311	70868628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864894_70865867_70868483
ENSMUSG00000018449.13_70861312_70868755_1	chr11	+	923	7	FSM	ENSMUSG00000018449.13	ENSMUST00000018593.10	1100	7	273	-96	0	96	multi-exon	FALSE	canonical	3	224	junction_4	48.3922055248111	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAAAGGAATAGCGAATG	NA	False	NA	141	True	AATAAA	-19	NA	70861311	70868755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865725_70865867_70868483
ENSMUSG00000018500.3_62139810_62156935_1	chr11	+	1501	2	FSM	ENSMUSG00000018500.3	ENSMUST00000018644.3	1845	2	0	344	0	-344	multi-exon	FALSE	canonical	3	17	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATACTTGTTCCTGGGGC	8723	False	NA	NA	False	AATAAA	-16	NA	62139809	62156935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_62140263_62155887
ENSMUSG00000018501.18_62349286_62404730_1	chr11	-	1661	7	NIC	ENSMUSG00000018501.18	novel	646	5	NA	NA	-55363	-38730	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	635	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGTAAGTGGCACTGCG	6182	False	NA	NA	False	AAGAAA	-15	NA	62404730	62349285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729
ENSMUSG00000018509.9_62415772_62429829_1	chr11	-	774	5	FSM	ENSMUSG00000018509.9	ENSMUST00000018653.8	1032	5	258	0	0	0	multi-exon	FALSE	canonical	3	1369	junction_4	69.2639877569867	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACTATGACATATTTCT	8629	False	NA	-14	True	AATAAA	-19	NA	62429829	62415771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_62416114_62418317_62418433_62424710_62424781_62427107_62427207_62429681
ENSMUSG00000018537.17_97580646_97590467_1	chr11	-	1337	10	NNC	ENSMUSG00000018537.17	novel	1438	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	74.4830745543021	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATATACATACTTATTT	NA	False	NA	8	True	NA	NA	NA	97590467	97580645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582729_97582848_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
ENSMUSG00000018537.17_97580646_97590467_2	chr11	-	1343	10	FSM	ENSMUSG00000018537.17	ENSMUST00000169807.8	2347	10	7	997	0	0	multi-exon	FALSE	canonical	3	83	junction_9	43.2000800182158	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATATACATACTTATTT	NA	False	NA	8	True	NA	NA	NA	97590467	97580645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
ENSMUSG00000018541.11_97636307_97657382_1	chr11	-	3239	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	0	-134	0	0	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTCTTGGAGCAAGAATG	7435	False	NA	-1	True	AATAAA	-20	NA	97657382	97636306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
ENSMUSG00000018541.11_97637613_97657382_1	chr11	-	1933	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	0	1172	0	881	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTGGATGACCTTG	7435	False	NA	NA	False	AAAAAG	-16	NA	97657382	97637612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
ENSMUSG00000018548.16_87017903_87141697_1	chr11	+	3560	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	0	30188	at_least_one_novel_splicesite	TRUE	canonical	3	225	junction_24	67.5794671109502	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTTGTCATAATTTG	1916	False	NA	5	True	NA	NA	NA	87017902	87141697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ENSMUSG00000018548.16_87018014_87141697_1	chr11	+	3449	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	111	30188	at_least_one_novel_splicesite	FALSE	canonical	3	225	junction_24	67.5794671109502	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTTGTCATAATTTG	2027	False	NA	5	True	NA	NA	NA	87018013	87141697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ENSMUSG00000018565.18_69859050_69871089_1	chr11	-	1106	8	NNC	ENSMUSG00000018565.18	novel	1454	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	201.064919965707	2012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAATGCTTAAACA	9889	False	NA	0	True	AATAAA	-30	NA	69871089	69859049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_69859359_69859916_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039
ENSMUSG00000018565.18_69859050_69871089_2	chr11	-	1187	8	NNC	ENSMUSG00000018565.18	novel	1454	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_4	185.270789133426	2102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAATGCTTAAACA	9889	False	NA	0	True	AATAAA	-30	NA	69871089	69859049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865787_69866087_69870655_69870737_69870824_69870886_69871039
ENSMUSG00000018565.18_69859050_69871089_3	chr11	-	1013	7	NIC	ENSMUSG00000018565.18	novel	1454	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	197.076127422882	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAATGCTTAAACA	9889	False	NA	0	True	AATAAA	-30	NA	69871089	69859049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_69859367_69859921_69860023_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039
ENSMUSG00000018567.15_69882465_69885777_1	chr11	+	855	4	FSM	ENSMUSG00000018567.15	ENSMUST00000018711.15	1351	4	496	0	0	0	multi-exon	FALSE	canonical	3	795	junction_2	75.6350888587213	5333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCCTGTGTCATTCCAC	5224	False	NA	16	True	AATAAA	-26	NA	69882464	69885777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284
ENSMUSG00000018567.15_69882510_69885777_1	chr11	+	810	4	FSM	ENSMUSG00000018567.15	ENSMUST00000018711.15	1351	4	541	0	0	0	multi-exon	FALSE	canonical	3	795	junction_2	75.6350888587213	4776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCCTGTGTCATTCCAC	5269	False	NA	16	True	AATAAA	-26	NA	69882509	69885777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284
ENSMUSG00000018570.18_69788189_69791740_1	chr11	-	1605	9	NIC	ENSMUSG00000018570.18	novel	1640	9	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.70087712549569	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGCTGGGAGCTGCG	9769	False	NA	-13	True	AATAAA	-15	NA	69791740	69788188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_69788319_69788436_69788581_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790637_69791128
ENSMUSG00000018570.18_69788189_69791740_2	chr11	-	1577	8	NIC	ENSMUSG00000018570.18	novel	1485	8	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	5.03457433905888	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGCTGGGAGCTGCG	9769	False	NA	-13	True	AATAAA	-15	NA	69791740	69788188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_69788319_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790753_69791128
ENSMUSG00000018572.11_69886702_69890593_1	chr11	+	1464	5	FSM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	0	242	0	2	multi-exon	FALSE	canonical	3	83	junction_3	201.26273251648	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTCCCCTCATGTTTCTT	2416	False	NA	8	True	TATAAA	-18	NA	69886701	69890593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889327_69889959_69890063
ENSMUSG00000018581.16_117807623_117842441_1	chr12	-	2584	10	NIC	ENSMUSG00000018581.16	novel	8260	52	NA	NA	37032	34094	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCGCGGCCCCGAGCA	NA	False	NA	NA	False	NA	NA	NA	117842441	117807622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ENSMUSG00000018583.6_55360544_55391340_1	chr11	+	2338	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	0	-4324	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	2090.43770180409	4227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGGGGGAACTGTAGA	NA	False	NA	41	True	AATAAA	-28	NA	55360543	55391340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389486_55390284
ENSMUSG00000018583.6_55360544_55391709_2	chr11	+	298	3	NNC	ENSMUSG00000018583.6	novel	592	3	NA	NA	0	-3955	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3860.5	273	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	17	True	ATTAAA	-18	NA	55360543	55391709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_55360628_55376451_55376532_55391575
ENSMUSG00000018593.14_55285326_55310726_1	chr11	-	422	2	NNC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3856	False	NA	-2	True	AATAAA	-22	NA	55310726	55285325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_55285673_55310651
ENSMUSG00000018593.14_55285326_55310726_2	chr11	-	805	8	NNC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	257.913290285946	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3856	False	NA	-2	True	AATAAA	-22	NA	55310726	55285325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_55285429_55290023_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ENSMUSG00000018593.14_55285326_55310726_3	chr11	-	2112	10	NNC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	234.825440815771	2036	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3856	False	NA	-2	True	AATAAA	-22	NA	55310726	55285325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310621
ENSMUSG00000018593.14_55285326_55310726_4	chr11	-	839	8	NNC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	257.913290285946	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3856	False	NA	-2	True	AATAAA	-22	NA	55310726	55285325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_55285453_55290013_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ENSMUSG00000018593.14_55285326_55310726_5	chr11	-	800	8	NNC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	257.913290285946	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3856	False	NA	-2	True	AATAAA	-22	NA	55310726	55285325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_55285414_55290013_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ENSMUSG00000018593.14_55285326_55310726_6	chr11	-	833	8	NNC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	257.913290285946	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3856	False	NA	-2	True	AATAAA	-22	NA	55310726	55285325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_55285447_55290013_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ENSMUSG00000018593.14_55285326_55314009_1	chr11	-	2435	12	NNC	ENSMUSG00000018593.14	novel	1269	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_9	307.494218181214	1480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	573	False	NA	-2	True	AATAAA	-22	NA	55314009	55285325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310904_55311027_55312068_55312192_55313826
ENSMUSG00000018593.14_55285326_55314009_2	chr11	-	2190	10	FSM	ENSMUSG00000018593.14	ENSMUST00000214685.2	1269	10	0	-921	0	0	multi-exon	FALSE	canonical	3	36	junction_9	224.039568815559	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	573	False	NA	-2	True	AATAAA	-22	NA	55314009	55285325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55313826
ENSMUSG00000018593.14_55286212_55310726_1	chr11	-	1226	10	NNC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	234.825440815771	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCCCACATAACTCTGA	3856	False	NA	NA	False	NA	NA	NA	55310726	55286211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310621
ENSMUSG00000018599.6_60619269_60623777_1	chr11	+	2671	3	FSM	ENSMUSG00000018599.6	ENSMUST00000154890.2	716	3	0	-1955	0	0	multi-exon	FALSE	canonical	3	114	junction_2	20.5	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619268	60623777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_60619394_60621108_60621619_60621741
ENSMUSG00000018599.6_60619269_60623777_2	chr11	+	2524	4	NIC	ENSMUSG00000018599.6	novel	2522	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	59.6713219785406	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619268	60623777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_60619394_60621108_60621262_60621408_60621619_60621741
ENSMUSG00000018604.19_119809083_119812329_1	chr5	+	1626	2	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	0	10460	0	601	5prime_fragment	FALSE	canonical	3	797	junction_1	0	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAACAACATATCGGATAAA	NA	False	NA	NA	False	NA	NA	NA	119809082	119812329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_119810470_119812090
ENSMUSG00000018604.19_119818815_119822075_1	chr5	+	1696	2	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	9732	714	501	-551	3prime_fragment	FALSE	canonical	3	1076	junction_1	0	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATGTAATTATTTGAT	NA	False	NA	26	True	AATAAA	-26	NA	119818814	119822075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_119819131_119820695
ENSMUSG00000018651.15_83969491_84020426_1	chr11	-	2406	16	FSM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	0	-255	0	255	multi-exon	FALSE	canonical	3	409	junction_10	48.5691259958423	1566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGCCGCTTTCTGTGAG	NA	False	NA	-20	True	AATAAA	-19	NA	84020426	83969490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ENSMUSG00000018651.15_83969746_84020426_1	chr11	-	2091	15	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_12	142.244346396026	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGTGTGTCAGATAT	NA	False	NA	-4	True	ATTAAA	-17	NA	84020426	83969745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84011907_84012015_84017813_84017922_84020362
ENSMUSG00000018651.15_83969746_84020426_2	chr11	-	2134	16	NNC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_15	141.564684861727	1462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGTGTGTCAGATAT	NA	False	NA	-4	True	ATTAAA	-17	NA	84020426	83969745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020379
ENSMUSG00000018659.13_96828651_96834605_1	chr11	-	1787	7	FSM	ENSMUSG00000018659.13	ENSMUST00000018803.12	1994	7	207	0	0	0	multi-exon	FALSE	canonical	3	181	junction_4	10.434983894999	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTAACTTGATTCCAT	NA	False	NA	-2	True	AATAAA	-25	NA	96834605	96828650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_96829910_96830080_96830152_96830473_96830603_96830841_96830896_96831681_96831782_96833235_96833361_96834556
ENSMUSG00000018666.14_96679963_96698975_1	chr11	+	1339	6	NNC	ENSMUSG00000018666.14	novel	2377	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_4	289.614916742905	1462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	96679962	96698975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693825_96697441_96697591_96698628
ENSMUSG00000018666.14_96679963_96698975_2	chr11	+	1163	6	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	188	junction_5	206.095705923243	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	96679962	96698975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96698628
ENSMUSG00000018666.14_96679963_96698975_3	chr11	+	1193	6	NNC	ENSMUSG00000018666.14	novel	2377	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	271.902188295718	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	96679962	96698975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697621_96698628
ENSMUSG00000018669.15_96798642_96807240_1	chr11	-	1770	14	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	306.655541775744	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807240	96798641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802515_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ENSMUSG00000018669.15_96798642_96807240_2	chr11	-	1757	14	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	292.613200671297	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807240	96798641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_96798949_96799055_96799228_96799539_96799725_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ENSMUSG00000018669.15_96798642_96807240_3	chr11	-	1965	13	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	82	390	0	0	intron_retention	FALSE	canonical	3	982	junction_6	81.183776430735	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807240	96798641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976
ENSMUSG00000018669.15_96798642_96807339_1	chr11	-	1856	14	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	292.613200671297	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807339	96798641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_96798949_96799055_96799228_96799539_96799725_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ENSMUSG00000018677.10_102293971_102297781_1	chr11	-	1500	12	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_11	1375.04181754592	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	8277	False	NA	95	True	NA	NA	NA	102297781	102293970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102297651
ENSMUSG00000018677.10_102293971_102298141_1	chr11	-	1448	12	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_11	1348.24224715916	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7917	False	NA	95	True	NA	NA	NA	102298141	102293970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298063
ENSMUSG00000018677.10_102293971_102298245_1	chr11	-	1319	11	NIC	ENSMUSG00000018677.10	novel	1564	11	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_1	1393.56754052324	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7813	False	NA	95	True	NA	NA	NA	102298245	102293970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_102294362_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ENSMUSG00000018677.10_102293971_102298313_1	chr11	-	1468	12	FSM	ENSMUSG00000018677.10	ENSMUST00000018821.9	1685	12	57	160	0	0	multi-exon	FALSE	canonical	3	4398	junction_3	174.765959202208	2840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7745	False	NA	95	True	NA	NA	NA	102298313	102293970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ENSMUSG00000018677.10_102293971_102298772_1	chr11	-	1539	12	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_11	1345.10671179491	1583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7286	False	NA	95	True	NA	NA	NA	102298772	102293970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298603
ENSMUSG00000018678.14_96844299_96868537_1	chr11	-	2923	7	FSM	ENSMUSG00000018678.14	ENSMUST00000107624.8	3055	7	0	132	0	0	multi-exon	FALSE	canonical	3	58	junction_6	154.880599172395	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGTTGTAACTGCTTG	NA	False	NA	-11	True	ATTAAA	-16	NA	96868537	96844298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854271_96868446
ENSMUSG00000018678.14_96845045_96868537_1	chr11	-	2177	7	FSM	ENSMUSG00000018678.14	ENSMUST00000107624.8	3055	7	0	878	0	0	multi-exon	FALSE	canonical	3	58	junction_6	154.880599172395	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCGTGGGGACCCTTATT	NA	False	NA	NA	False	NA	NA	NA	96868537	96845044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854271_96868446
ENSMUSG00000018727.20_113588998_113599793_1	chr11	-	1152	6	ISM	ENSMUSG00000018727.20	ENSMUST00000018871.8	1235	7	1050	0	0	0	3prime_fragment	FALSE	canonical	3	9	junction_3	89.8100217125016	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113599793	113588997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_113589493_113590661_113590809_113593238_113593336_113594096_113594193_113597242_113597396_113599629
ENSMUSG00000018727.20_113588998_113600472_3	chr11	-	1226	8	NNC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-120	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	63.6046462171449	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600472	113588997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_113589383_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600212
ENSMUSG00000018727.20_113588998_113600472_4	chr11	-	1339	8	FSM	ENSMUSG00000018727.20	ENSMUST00000173655.8	1213	8	-126	0	-120	0	multi-exon	FALSE	canonical	3	9	junction_4	68.8879599088851	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600472	113588997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593336_113594096_113594193_113597242_113597396_113599629_113599681_113600212
ENSMUSG00000018727.20_113588998_113600844_1	chr11	-	1186	8	NNC	ENSMUSG00000018727.20	novel	1213	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	82.283234089606	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600844	113588997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593336_113594096_113594193_113597242_113597396_113599629_113599681_113600737
ENSMUSG00000018727.20_113588998_113600844_3	chr11	-	1276	8	NIC	ENSMUSG00000018727.20	novel	1213	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	75.7547061917877	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600844	113588997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593336_113594096_113594193_113597242_113597396_113599629_113599681_113600647
ENSMUSG00000018733.11_83185901_83189768_1	chr11	-	2383	4	NIC	ENSMUSG00000018733.11	novel	2389	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	21.4009345590327	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGACTTCTTGAAGTTT	2426	False	NA	-7	True	AATAAA	-16	NA	83189768	83185900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_83187267_83188313_83188868_83189141_83189374_83189537
ENSMUSG00000018733.11_83185901_83189768_2	chr11	-	2261	4	FSM	ENSMUSG00000018733.11	ENSMUST00000018877.9	2729	4	35	433	0	0	multi-exon	FALSE	canonical	3	9	junction_3	22.7596133534821	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGACTTCTTGAAGTTT	2426	False	NA	-7	True	AATAAA	-16	NA	83189768	83185900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189665
ENSMUSG00000018740.15_68863310_68864681_1	chr11	+	675	4	NIC	ENSMUSG00000018740.15	novel	3648	5	NA	NA	4336	-510	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCACGCCCTGCGAGCAC	9911	False	NA	NA	False	NA	NA	NA	68863309	68864681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_68863568_68863768_68863855_68864266_68864384_68864467
ENSMUSG00000018740.15_68863310_68864681_2	chr11	+	589	3	NIC	ENSMUSG00000018740.15	novel	3648	5	NA	NA	4336	-510	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCACGCCCTGCGAGCAC	9911	False	NA	NA	False	NA	NA	NA	68863309	68864681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_68863568_68864266_68864384_68864467
ENSMUSG00000018740.15_68863310_68864681_3	chr11	+	820	5	NNC	ENSMUSG00000018740.15	novel	3648	5	NA	NA	4336	-510	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCACGCCCTGCGAGCAC	9911	False	NA	NA	False	NA	NA	NA	68863309	68864681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_68863556_68863768_68863855_68863942_68864100_68864266_68864384_68864467
ENSMUSG00000018761.15_69547523_69553416_1	chr11	-	1183	6	FSM	ENSMUSG00000018761.15	ENSMUST00000125389.2	646	6	-72	-465	-3	0	multi-exon	FALSE	canonical	3	53	junction_3	239.282761602252	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTAGTGTGCATTCT	6813	False	NA	-4	True	AATAAA	-33	NA	69553416	69547522	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69549391_69549525_69549636_69549703_69553294
ENSMUSG00000018765.6_69523816_69544123_1	chr11	+	890	4	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	556.054154037376	576	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523815	69544123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_69523854_69542839_69542900_69543035_69543134_69543429
ENSMUSG00000018765.6_69523816_69544123_2	chr11	+	915	4	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	556.054154037376	583	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523815	69544123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_69523877_69542837_69542900_69543035_69543134_69543429
ENSMUSG00000018765.6_69542143_69544123_1	chr11	+	1209	5	ISM	ENSMUSG00000018765.6	ENSMUST00000018909.4	2951	17	18327	0	188	0	3prime_fragment	FALSE	canonical	3	1063	junction_3	111.850346445597	697	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69542142	69544123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ENSMUSG00000018770.10_73738791_73741644_1	chr2	-	288	3	NNC	ENSMUSG00000018770.10	novel	714	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1029	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741644	73738790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_73738999_73741373_73741405_73741595
ENSMUSG00000018770.10_73738791_73741644_10	chr2	-	682	5	NNC	ENSMUSG00000018770.10	novel	723	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1875.22696959595	17621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741644	73738790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741389_73741585
ENSMUSG00000018770.10_73738791_73741644_2	chr2	-	688	5	NNC	ENSMUSG00000018770.10	novel	723	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1912.90464673491	9889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741644	73738790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_73739052_73739527_73739712_73740207_73740286_73741298_73741405_73741585
ENSMUSG00000018770.10_73738791_73741644_3	chr2	-	690	5	NNC	ENSMUSG00000018770.10	novel	723	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1875.22696959595	32385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741644	73738790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741397_73741585
ENSMUSG00000018770.10_73738791_73741644_4	chr2	-	682	5	NNC	ENSMUSG00000018770.10	novel	714	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1751.4433155258	16825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741644	73738790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_73739052_73739527_73739712_73740203_73740286_73741298_73741405_73741595
ENSMUSG00000018770.10_73738791_73741644_5	chr2	-	706	5	NNC	ENSMUSG00000018770.10	novel	714	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	1872.63669394253	28570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741644	73738790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741423_73741595
ENSMUSG00000018770.10_73738791_73741644_6	chr2	-	1164	4	FSM	ENSMUSG00000018770.10	ENSMUST00000142768.8	862	4	-18	-284	-9	0	multi-exon	FALSE	canonical	3	2058	junction_3	1115.93219626762	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741644	73738790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_73739722_73740207_73740286_73741298_73741405_73741595
ENSMUSG00000018770.10_73738791_73741644_7	chr2	-	644	5	NNC	ENSMUSG00000018770.10	novel	714	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1845.53750639211	2862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741644	73738790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_73739030_73739549_73739722_73740207_73740286_73741298_73741405_73741595
ENSMUSG00000018770.10_73738791_73741644_8	chr2	-	681	5	NNC	ENSMUSG00000018770.10	novel	714	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1806.38921608827	10981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741644	73738790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_73739052_73739527_73739722_73740207_73740279_73741298_73741405_73741595
ENSMUSG00000018770.10_73738791_73741644_9	chr2	-	507	5	NNC	ENSMUSG00000018770.10	novel	714	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1845.53750639211	2004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741644	73738790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_73739030_73739686_73739722_73740207_73740286_73741298_73741405_73741595
ENSMUSG00000018774.14_69555039_69557008_1	chr11	-	825	5	FSM	ENSMUSG00000018774.14	ENSMUST00000154124.2	612	5	-120	-93	-29	0	multi-exon	FALSE	canonical	3	24	junction_4	48.9540600971972	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTCTTTCCTCATTAA	3221	False	NA	-1	True	AATAAA	-19	NA	69557008	69555038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69555331_69555576_69555748_69555860_69555940_69556072_69556193_69556845
ENSMUSG00000018809.3_75239321_75296193_1	chr11	+	3117	11	FSM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	62	338	0	-338	multi-exon	FALSE	canonical	3	60	junction_7	9.20923449587424	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTCACTGATCTGCAG	NA	False	NA	NA	False	NA	NA	NA	75239320	75296193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ENSMUSG00000018821.4_42111842_42117453_1	chr19	-	869	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	45	130	-25	-130	multi-exon	FALSE	canonical	3	851	junction_1	12	2933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTCTCACCATCTCT	NA	False	NA	0	True	AATAAA	-18	NA	42117453	42111841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_42112288_42113186_42113466_42117309
ENSMUSG00000018841.18_82768622_82781441_1	chr11	-	2330	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	-1	1097	-1	941	multi-exon	TRUE	canonical	3	107	junction_4	12.9099444873581	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGTTGTTTATGGACCA	NA	False	NA	78	True	AATAAA	-17	NA	82781441	82768621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
ENSMUSG00000018841.18_82769279_82781441_1	chr11	-	1673	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	-1	1754	-1	284	multi-exon	FALSE	canonical	3	107	junction_4	12.9099444873581	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTTATGCATATCCTAC	NA	False	NA	NA	False	NA	NA	NA	82781441	82769278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
ENSMUSG00000018841.18_82769458_82781441_1	chr11	-	1494	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	-1	1933	-1	105	multi-exon	FALSE	canonical	3	107	junction_4	12.9099444873581	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATAGTGTCCTGGTCCTG	NA	False	NA	-2	True	AAGAAA	-17	NA	82781441	82769457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
ENSMUSG00000018844.7_82791594_82799237_1	chr11	+	1775	13	NNC	ENSMUSG00000018844.7	novel	2166	4	NA	NA	8644	7610	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	632	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCGCCGGGCAACCTCCG	6219	False	NA	NA	False	NA	NA	NA	82791593	82799237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_82791877_82792382_82792454_82792534_82792687_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ENSMUSG00000018844.7_82791594_82799237_2	chr11	+	1777	13	NNC	ENSMUSG00000018844.7	novel	2166	4	NA	NA	8644	7610	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	631	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCGCCGGGCAACCTCCG	6219	False	NA	NA	False	NA	NA	NA	82791593	82799237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794921_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ENSMUSG00000018848.5_35699208_35725333_1	chr11	-	2104	15	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	250.600543999931	2637	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	False	NA	-1	True	AGTAAA	-17	NA	35725333	35699207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724129_35725263
ENSMUSG00000018858.16_115294583_115301745_1	chr11	+	799	5	NIC	ENSMUSG00000018858.16	novel	749	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	443.439045980392	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	16	True	AATAAA	-16	NA	115294582	115301745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_115294787_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ENSMUSG00000018858.16_115294583_115301745_2	chr11	+	836	6	FSM	ENSMUSG00000018858.16	ENSMUST00000153983.8	2596	6	5	1755	0	0	multi-exon	FALSE	canonical	3	944	junction_3	61.9825781974258	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	16	True	AATAAA	-16	NA	115294582	115301745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_115294787_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ENSMUSG00000018861.9_115158850_115168068_1	chr11	-	1779	12	NNC	ENSMUSG00000018861.9	novel	1948	12	NA	NA	-192	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_11	32.3513766360558	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGCTGATAGCTACCA	NA	False	NA	0	True	AATAAA	-17	NA	115168068	115158849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167995
ENSMUSG00000018865.10_83960298_83989828_1	chr15	-	2385	8	FSM	ENSMUSG00000018865.10	ENSMUST00000229826.2	1319	8	-18	-1048	-18	0	multi-exon	FALSE	canonical	3	60	junction_2	10.0285307284481	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGTCTGTGTGC	NA	False	NA	-1	True	AATAAA	-17	NA	83989828	83960297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83961784_83962969_83963099_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
ENSMUSG00000018882.13_97206734_97219937_1	chr11	+	1430	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	192	809	0	-809	multi-exon	FALSE	canonical	3	2561	junction_3	172.211545276531	5293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTCTGTACATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	97206733	97219937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
ENSMUSG00000018882.13_97206734_97219937_2	chr11	+	1604	8	NNC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	0	-809	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_5	1010.03465287088	4975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTCTGTACATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	97206733	97219937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217433_97217758_97218911_97219086_97219307
ENSMUSG00000018919.11_70400796_70402004_1	chr11	+	735	4	NNC	ENSMUSG00000018919.11	novel	478	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	4.96655480858378	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATGTGCCAGTGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	70400795	70402004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_70400873_70401040_70401178_70401394_70401579_70401667
ENSMUSG00000018923.14_70342758_70344553_2	chr11	+	1033	2	FSM	ENSMUSG00000018923.14	ENSMUST00000152348.2	870	2	0	-163	0	0	multi-exon	FALSE	canonical	3	117	junction_1	0	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCTCTCTCTCGC	NA	False	NA	NA	False	AATAAA	-20	NA	70342757	70344553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70343165_70343927
ENSMUSG00000018931.4_60793882_60804638_1	chr11	-	3369	3	FSM	ENSMUSG00000018931.4	ENSMUST00000019075.4	4179	3	0	810	0	-810	multi-exon	TRUE	canonical	3	156	junction_2	31	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTCTCTGCTTTTCTCT	6624	False	NA	-1	True	ATTAAA	-22	NA	60804638	60793881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_60796948_60797707_60797827_60804454
ENSMUSG00000018931.4_60795313_60804638_1	chr11	-	1938	3	FSM	ENSMUSG00000018931.4	ENSMUST00000019075.4	4179	3	0	2241	0	1467	multi-exon	FALSE	canonical	3	156	junction_2	31	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCCCCCTACCCCTC	6624	False	NA	NA	False	NA	NA	NA	60804638	60795312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_60796948_60797707_60797827_60804454
ENSMUSG00000018932.10_60822880_60843622_1	chr11	+	2157	12	NNC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	124.06556517749	1323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTGAGACTGACTGTGG	NA	False	NA	NA	False	NA	NA	NA	60822879	60843622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_60823098_60832705_60832773_60833135_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ENSMUSG00000018932.10_60822880_60843622_2	chr11	+	2150	12	NNC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	124.06556517749	1283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTGAGACTGACTGTGG	NA	False	NA	NA	False	NA	NA	NA	60822879	60843622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_60823098_60832705_60832761_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ENSMUSG00000018932.10_60822880_60843622_3	chr11	+	2156	12	NNC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	125.465019325628	1285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTGAGACTGACTGTGG	NA	False	NA	NA	False	NA	NA	NA	60822879	60843622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837942_60838015_60840746_60840887_60841983_60842030_60842589
ENSMUSG00000018965.12_33176342_33185310_1	chr5	+	1582	2	FSM	ENSMUSG00000018965.12	ENSMUST00000019109.8	1764	2	182	0	120	0	multi-exon	FALSE	canonical	3	1727	junction_1	0	1115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCCTGGCCTTGATTT	NA	False	NA	9	True	AATAAA	-20	NA	33176341	33185310	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_33176499_33183885
ENSMUSG00000018974.8_113880507_113909699_1	chr5	-	3575	19	FSM	ENSMUSG00000018974.8	ENSMUST00000019118.8	4447	19	872	0	0	0	multi-exon	FALSE	canonical	3	367	junction_17	27.7084133944819	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGCATTGCAGCT	NA	False	NA	-16	True	ATTAAA	-16	NA	113909699	113880506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ENSMUSG00000018995.13_96600769_96712699_1	chr7	+	2455	14	FSM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	57	1266	0	520	multi-exon	FALSE	canonical	3	94	junction_6	11.3976017408833	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATGAAAGAAGTTATTTT	7399	False	NA	6	True	ATTAAA	-18	NA	96600768	96712699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
ENSMUSG00000018999.15_34132810_34153911_1	chr6	-	3623	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	135	2495	-6	848	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	-24	True	TATAAA	-19	NA	34153911	34132809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ENSMUSG00000018999.15_34133456_34153911_1	chr6	-	2977	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	135	3141	-6	202	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGAATCTGTCCCTCGG	NA	False	NA	-1	True	AATAAA	-25	NA	34153911	34133455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ENSMUSG00000018999.15_34135020_34153911_1	chr6	-	1413	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	135	4705	-6	0	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTCCAAGTCTCAGAGC	NA	False	NA	22	True	NA	NA	NA	34153911	34135019	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ENSMUSG00000019039.15_108449510_108451466_1	chr9	+	1602	5	NIC	ENSMUSG00000019039.15	novel	410	2	NA	NA	44	1493	intron_retention	FALSE	non_canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGACACTACCTGAGCAG	NA	False	NA	NA	False	NA	NA	NA	108449509	108451466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299
ENSMUSG00000019039.15_108449510_108451737_1	chr9	+	1873	5	NIC	ENSMUSG00000019039.15	novel	410	2	NA	NA	44	1764	intron_retention	FALSE	non_canonical	0	0	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTCACTGTGCCCACACG	NA	False	NA	NA	False	NA	NA	NA	108449509	108451737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299
ENSMUSG00000019054.14_136982129_136995088_1	chr5	+	817	4	FSM	ENSMUSG00000019054.14	ENSMUST00000111097.8	601	4	-131	-85	0	0	multi-exon	FALSE	canonical	3	58	junction_1	234.963827003222	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGTGTGAGCGAGCA	4051	False	NA	20	True	AATAAA	-21	NA	136982128	136995088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_136982445_136993946_136994024_136994418_136994525_136994770
ENSMUSG00000019054.14_136982260_136995088_1	chr5	+	819	5	FSM	ENSMUSG00000019054.14	ENSMUST00000111094.8	948	5	131	-2	0	0	multi-exon	FALSE	canonical	3	123	junction_1	181.92443486239	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGTGTGAGCGAGCA	4182	False	NA	20	True	AATAAA	-21	NA	136982259	136995088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_136982445_136991852_136991986_136993946_136994024_136994418_136994525_136994770
ENSMUSG00000019055.16_147994518_148021182_1	chr4	-	2893	19	FSM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	42	308	0	-308	multi-exon	FALSE	canonical	3	68	junction_3	12.7855049099544	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATGAGAGATGCCTGGG	NA	False	NA	-4	True	ATTAAA	-15	NA	148021182	147994517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187_148017280_148021058
ENSMUSG00000019055.16_147994763_148021182_1	chr4	-	2648	19	FSM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	42	553	0	-553	multi-exon	FALSE	canonical	3	68	junction_3	12.7855049099544	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTAGGACTCTTGATGC	NA	False	NA	NA	False	NA	NA	NA	148021182	147994762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187_148017280_148021058
ENSMUSG00000019082.19_141009662_141017515_1	chr7	-	2516	10	FSM	ENSMUSG00000019082.19	ENSMUST00000019226.14	2811	10	290	5	-9	0	multi-exon	FALSE	canonical	3	72	junction_9	20.9708792800344	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCTTTAAGAGTCTGT	497	False	NA	-19	True	AATAAA	-18	NA	141017515	141009661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
ENSMUSG00000019082.19_141009879_141017515_1	chr7	-	2299	10	FSM	ENSMUSG00000019082.19	ENSMUST00000019226.14	2811	10	290	222	-9	-210	multi-exon	FALSE	canonical	3	72	junction_9	20.9708792800344	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGAGGCCCCTTCCCA	497	False	NA	NA	False	NA	NA	NA	141017515	141009878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
ENSMUSG00000019087.14_73340749_73348296_1	chrX	+	2664	9	NIC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	665	junction_4	23.6748812035034	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340748	73348296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ENSMUSG00000019087.14_73340749_73348296_2	chrX	+	2106	10	NIC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	212.313069560432	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340748	73348296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344965_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ENSMUSG00000019087.14_73340839_73348296_1	chrX	+	2022	10	FSM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	136	31	0	1	multi-exon	FALSE	canonical	3	647	junction_4	26.5934179176579	1563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340838	73348296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ENSMUSG00000019087.14_73340839_73348296_2	chrX	+	2016	10	NIC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	212.313069560432	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340838	73348296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344965_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ENSMUSG00000019122.9_83465486_83473161_1	chr11	-	1080	4	NNC	ENSMUSG00000019122.9	novel	3006	4	NA	NA	-3699	658	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_3	12.9614813968157	172	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTCTGTCTGCCTCTTTT	NA	False	NA	-1	True	AATAAA	-18	NA	83473161	83465485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_83466322_83466668_83466778_83467200_83467273_83473098
ENSMUSG00000019124.11_54486093_54543474_1	chr6	-	1592	8	FSM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	0	3218	0	0	multi-exon	FALSE	canonical	3	46	junction_2	7.92824967172092	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCTTGTGTCTAAATGT	NA	False	NA	-3	True	AGTAAA	-18	NA	54543474	54486092	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493_54502697_54511397_54511580_54525208_54525369_54543224
ENSMUSG00000019132.12_24987226_24997967_1	chr13	+	2050	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	1586	2213	1223	1324	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGGCTACTCAGATGGAT	NA	False	NA	112	True	AATAAA	-14	NA	24987225	24997967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ENSMUSG00000019139.11_71047023_71049940_1	chr8	+	1946	11	FSM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	-108	-2	0	0	multi-exon	FALSE	canonical	3	300	junction_1	49.1426495012225	1213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTGTGTGCTTTTTC	NA	False	NA	20	True	AATAAA	-16	NA	71047022	71049940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ENSMUSG00000019143.16_36899581_36916210_1	chr18	+	1933	13	NNC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	-16480	-3301	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1946	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTCGGATGACTTCCGGT	NA	False	NA	NA	False	NA	NA	NA	36899580	36916210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909342_36915732_36915823_36916063
ENSMUSG00000019143.16_36899581_36916210_2	chr18	+	1935	13	NNC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	-16480	-3301	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTCGGATGACTTCCGGT	NA	False	NA	NA	False	NA	NA	NA	36899580	36916210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904386_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
ENSMUSG00000019173.12_100606092_100629005_1	chr11	-	1676	6	FSM	ENSMUSG00000019173.12	ENSMUST00000019317.12	1967	6	36	255	-3	-255	multi-exon	FALSE	canonical	1	1	junction_2	59.308009577122	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTCTTCCTCGTCCTT	NA	False	NA	-1	True	AATATA	-23	NA	100629005	100606091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100606989_100607583_100607732_100608667_100608791_100609256_100609409_100610740_100610995_100628903
ENSMUSG00000019173.12_100606092_100629005_2	chr11	-	1306	7	NNC	ENSMUSG00000019173.12	novel	1915	6	NA	NA	-3	-255	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.5099379318426	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTCTTCCTCGTCCTT	NA	False	NA	-1	True	AATATA	-23	NA	100629005	100606091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_100606257_100606572_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
ENSMUSG00000019173.12_100606092_100629005_3	chr11	-	1620	6	NNC	ENSMUSG00000019173.12	novel	1915	6	NA	NA	-3	-255	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	59.1290114918218	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTCTTCCTCGTCCTT	NA	False	NA	-1	True	AATATA	-23	NA	100629005	100606091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610989_100628899
ENSMUSG00000019173.12_100606092_100629005_4	chr11	-	1622	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	36	257	-3	-255	multi-exon	FALSE	canonical	3	116	junction_2	14.961283367412	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTCTTCCTCGTCCTT	NA	False	NA	-1	True	AATATA	-23	NA	100629005	100606091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
ENSMUSG00000019173.12_100606665_100629005_1	chr11	-	1049	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	36	830	-3	-828	multi-exon	FALSE	canonical	3	116	junction_2	14.961283367412	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTTTTTTAATATATAT	NA	False	NA	-3	True	NA	NA	NA	100629005	100606664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
ENSMUSG00000019179.11_135807490_135819245_1	chr5	+	1300	9	FSM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	156	0	0	0	multi-exon	FALSE	canonical	3	4657	junction_8	277.596267085853	15478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTGTAGATTTCCTTT	609	False	NA	38	True	AGTAAA	-25	NA	135807489	135819245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ENSMUSG00000019188.17_152511408_152546972_1	chr2	+	1559	12	FSM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	27	3618	0	16	multi-exon	FALSE	canonical	3	117	junction_7	14.82905345753	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTAGTGTTTCGTG	NA	False	NA	37	True	NA	NA	NA	152511407	152546972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ENSMUSG00000019235.10_85182408_85187241_2	chr12	-	1834	6	ISM	ENSMUSG00000019235.10	ENSMUST00000221972.2	2881	11	10797	385	-478	0	3prime_fragment	FALSE	canonical	3	114	junction_5	16.4073154415949	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTCAGTTCTTCTCAGG	613	False	NA	-3	True	NA	NA	NA	85187241	85182407	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117
ENSMUSG00000019235.10_85182533_85187241_2	chr12	-	1709	6	ISM	ENSMUSG00000019235.10	ENSMUST00000221972.2	2881	11	10797	510	-478	-119	3prime_fragment	FALSE	canonical	3	114	junction_5	16.4073154415949	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGTGTTTAAGAGCGG	613	False	NA	-12	True	AATAAA	-17	NA	85187241	85182532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117
ENSMUSG00000019261.4_71358631_71370173_1	chr8	+	843	3	NIC	ENSMUSG00000019261.4	novel	4635	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	161.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTTACTGTCTTAT	NA	False	NA	15	True	AATAAA	-15	NA	71358630	71370173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_71358772_71368994_71369219_71369695
ENSMUSG00000019295.9_33810560_33815252_1	chr5	-	2320	4	FSM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	508	0	-9	0	multi-exon	FALSE	canonical	3	50	junction_3	8.99382504215469	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTTCATTTTGTTTAAC	NA	False	NA	1	True	AATAAA	-19	NA	33815252	33810559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814966
ENSMUSG00000019295.9_33815472_33829545_2	chr5	-	2648	15	NIC	ENSMUSG00000019295.9	novel	2828	4	NA	NA	-13785	-2570	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGGGCGGCCTCGCGAG	NA	False	NA	NA	False	NA	NA	NA	33829545	33815471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ENSMUSG00000019301.6_100969847_100971353_1	chr11	+	951	4	ISM	ENSMUSG00000019301.6	ENSMUST00000019445.6	1339	6	610	0	610	0	3prime_fragment	FALSE	canonical	2	5	junction_1	8.04155872120988	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTGGAGGGGGACACAT	NA	False	NA	NA	False	NA	NA	NA	100969846	100971353	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_100969935_100970014_100970109_100970485_100970661_100970759
ENSMUSG00000019302.17_100900313_100918328_1	chr11	+	884	7	ISM	ENSMUSG00000019302.17	ENSMUST00000154896.8	4162	16	35	17321	0	2	5prime_fragment	FALSE	canonical	3	165	junction_5	19.5256241897666	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAAGCTTACTCCCCTC	NA	False	NA	NA	False	ATTAAA	-22	NA	100900312	100918328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092
ENSMUSG00000019302.17_100900313_100935649_1	chr11	+	2349	17	ISM	ENSMUSG00000019302.17	ENSMUST00000168757.9	3967	22	0	18890	0	0	5prime_fragment	FALSE	canonical	3	143	junction_12	25.0571222409917	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTCCTGGTCGTGATT	NA	False	NA	NA	False	AATAAA	-13	NA	100900312	100935649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341
ENSMUSG00000019302.17_100900313_100954545_1	chr11	+	3955	21	NIC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	127	junction_18	25.9536124653197	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTCTGAGTGTG	NA	False	NA	17	True	AATAAA	-22	NA	100900312	100954545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
ENSMUSG00000019303.15_100978130_100982713_1	chr11	-	1641	8	NIC	ENSMUSG00000019303.15	novel	1291	8	NA	NA	2273	4519	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCAGCGGACTGGCCCC	2160	False	NA	NA	False	NA	NA	NA	100982713	100978129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUSG00000019303.15_100978130_100983033_1	chr11	-	1961	8	NIC	ENSMUSG00000019303.15	novel	1291	8	NA	NA	1953	4519	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCAGCGGACTGGCCCC	1840	False	NA	NA	False	NA	NA	NA	100983033	100978129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUSG00000019303.15_100978130_100983033_2	chr11	-	1793	8	NNC	ENSMUSG00000019303.15	novel	1291	8	NA	NA	1953	4519	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	932	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCAGCGGACTGGCCCC	1840	False	NA	NA	False	NA	NA	NA	100983033	100978129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_100978188_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUSG00000019303.15_100982983_100986226_1	chr11	-	1027	7	NIC	ENSMUSG00000019303.15	novel	1030	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_5	148.134698463557	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATTTCCTCTGGATGAT	NA	False	NA	-21	True	TATAAA	-5	NA	100986226	100982982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984641_100985761_100985852_100985983
ENSMUSG00000019303.15_100982983_100986226_2	chr11	-	921	8	FSM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	36	334	0	0	multi-exon	FALSE	canonical	3	316	junction_7	41.1021624139417	1237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATTTCCTCTGGATGAT	NA	False	NA	-21	True	TATAAA	-5	NA	100986226	100982982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
ENSMUSG00000019303.15_100982983_100986226_3	chr11	-	943	8	NIC	ENSMUSG00000019303.15	novel	1291	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	137.651141421689	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATTTCCTCTGGATGAT	NA	False	NA	-21	True	TATAAA	-5	NA	100986226	100982982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984641_100985761_100985852_100985983_100986085_100986168
ENSMUSG00000019312.11_98337874_98346199_1	chr11	+	2183	15	FSM	ENSMUSG00000019312.11	ENSMUST00000019456.5	2397	15	214	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	7.18736135624932	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGTCCTGTCTGGCA	NA	False	NA	18	True	AATAAA	-18	NA	98337873	98346199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_98338076_98341591_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408_98345503_98345684
ENSMUSG00000019338.14_94918291_94922760_1	chr3	-	1627	2	ISM	ENSMUSG00000019338.14	ENSMUST00000137799.2	4147	7	-12	4143	-1	860	5prime_fragment	FALSE	canonical	3	70	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCAGTCTGGTAGAGGCC	NA	False	NA	NA	False	NA	NA	NA	94922760	94918290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_94919788_94922630
ENSMUSG00000019362.9_84972867_84976348_1	chr8	-	702	2	ISM	ENSMUSG00000019362.9	ENSMUST00000019506.9	616	3	0	0	0	0	intron_retention	FALSE	canonical	3	1856	junction_1	0	6012	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGTGTGCTGTTTGGT	9834	False	NA	-7	True	AATAAA	-12	NA	84976348	84972866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_84973323_84976102
ENSMUSG00000019370.11_16650732_16657894_1	chr7	-	704	5	NNC	ENSMUSG00000019370.11	novel	2290	6	NA	NA	-140	337	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1051.65904645945	2468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCATGACTGCTCTCTCT	NA	False	NA	-8	True	GATAAA	-22	NA	16657894	16650731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16657747
ENSMUSG00000019428.17_70980397_70987978_1	chr8	+	1949	8	ISM	ENSMUSG00000019428.17	ENSMUST00000119353.9	1720	9	23	0	0	0	intron_retention	FALSE	canonical	0	0	junction_1	536.662817411302	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980396	70987978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987132
ENSMUSG00000019428.17_70980397_70987978_2	chr8	+	1698	9	NNC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	448.998590615828	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980396	70987978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_70980491_70982046_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ENSMUSG00000019428.17_70980659_70987978_1	chr8	+	1637	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	163	-1	0	0	multi-exon	FALSE	canonical	3	550	junction_1	286.852068800279	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980658	70987978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ENSMUSG00000019428.17_70982039_70987978_1	chr8	+	1864	7	ISM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	1543	-1	573	0	intron_retention	FALSE	canonical	3	934	junction_3	165.713273122248	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70982038	70987978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132
ENSMUSG00000019432.16_35460754_35472652_1	chr17	+	1671	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	698.222571963983	8719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAACAACCGTGTCTGT	NA	False	NA	6	True	NA	NA	NA	35460753	35472652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472453
ENSMUSG00000019432.16_35460781_35472659_1	chr17	+	1651	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	698.222571963983	10670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCGTGTCTGTGGTGTCT	NA	False	NA	13	True	AATGAA	-2	NA	35460780	35472659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472453
ENSMUSG00000019437.18_78069557_78071307_1	chr11	+	1027	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	46	339	0	1	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTGAAGTCCTGTTCT	NA	False	NA	NA	False	AATGAA	-2	NA	78069556	78071307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
ENSMUSG00000019437.18_78069653_78071307_1	chr11	+	931	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	142	339	65	1	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTGAAGTCCTGTTCT	NA	False	NA	NA	False	AATGAA	-2	NA	78069652	78071307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
ENSMUSG00000019437.18_78071761_78074410_1	chr11	+	551	5	NNC	ENSMUSG00000019437.18	novel	2700	4	NA	NA	1662	1675	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	192943	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAATGGAGGCTCATAAA	1792	False	NA	NA	False	NA	NA	NA	78071760	78074410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_78071824_78071979_78072050_78072242_78072420_78073628_78073804_78074344
ENSMUSG00000019437.18_78071761_78074410_3	chr11	+	611	5	NNC	ENSMUSG00000019437.18	novel	2700	4	NA	NA	1662	1675	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	72515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAATGGAGGCTCATAAA	1792	False	NA	NA	False	NA	NA	NA	78071760	78074410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_78071824_78071979_78072050_78072242_78072420_78073628_78073860_78074340
ENSMUSG00000019437.18_78071761_78074410_4	chr11	+	552	5	NNC	ENSMUSG00000019437.18	novel	2700	4	NA	NA	1662	1675	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	52830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAATGGAGGCTCATAAA	1792	False	NA	NA	False	NA	NA	NA	78071760	78074410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_78071824_78071979_78072050_78072242_78072420_78073628_78073795_78074334
ENSMUSG00000019437.18_78071761_78074410_5	chr11	+	587	5	NNC	ENSMUSG00000019437.18	novel	2700	4	NA	NA	1662	1675	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	177164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAATGGAGGCTCATAAA	1792	False	NA	NA	False	NA	NA	NA	78071760	78074410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_78071824_78071979_78072050_78072242_78072420_78073628_78073813_78074317
ENSMUSG00000019437.18_78071761_78074410_6	chr11	+	694	5	NNC	ENSMUSG00000019437.18	novel	2700	4	NA	NA	1662	1675	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	28238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAATGGAGGCTCATAAA	1792	False	NA	NA	False	NA	NA	NA	78071760	78074410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_78071824_78071979_78072050_78072242_78072420_78073628_78073813_78074210
ENSMUSG00000019437.18_78071761_78074410_7	chr11	+	583	5	NNC	ENSMUSG00000019437.18	novel	2700	4	NA	NA	1662	1675	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	120885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAATGGAGGCTCATAAA	1792	False	NA	NA	False	NA	NA	NA	78071760	78074410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_78071847_78071979_78072050_78072242_78072420_78073628_78073813_78074344
ENSMUSG00000019437.18_78071761_78074410_8	chr11	+	1925	3	NIC	ENSMUSG00000019437.18	novel	2700	4	NA	NA	1662	1675	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAATGGAGGCTCATAAA	1792	False	NA	NA	False	NA	NA	NA	78071760	78074410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_78072050_78072242_78073813_78074344
ENSMUSG00000019470.13_3660087_3671302_1	chr8	-	2740	18	FSM	ENSMUSG00000019470.13	ENSMUST00000163038.8	4409	18	3	1666	0	0	multi-exon	FALSE	canonical	3	374	junction_11	45.4063544476041	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTCTTGACCTCCTTC	1025	False	NA	-4	True	AATACA	-16	NA	3671302	3660086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ENSMUSG00000019471.11_21050727_21061238_1	chr9	-	1593	8	NNC	ENSMUSG00000019471.11	novel	7851	8	NA	NA	0	1522	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	605.159685453318	2601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCTGGTTCAGTGCTGT	NA	False	NA	-8	True	AATAAA	-18	NA	21061238	21050726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053517_21053625_21053717_21053827_21054242_21054522_21061051
ENSMUSG00000019471.11_21050727_21061258_1	chr9	-	1622	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	20	6209	-20	1522	multi-exon	FALSE	canonical	3	1564	junction_6	89.7352113903194	2649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCTGGTTCAGTGCTGT	NA	False	NA	-8	True	AATAAA	-18	NA	21061258	21050726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
ENSMUSG00000019471.11_21050727_21061258_2	chr9	-	1769	8	NIC	ENSMUSG00000019471.11	novel	7851	8	NA	NA	-20	1522	combination_of_known_junctions	FALSE	canonical	3	62	junction_6	586.784875227641	2525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCTGGTTCAGTGCTGT	NA	False	NA	-8	True	AATAAA	-18	NA	21061258	21050726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053974_21054242_21054522_21061051
ENSMUSG00000019471.11_21051130_21061258_1	chr9	-	1219	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	20	6612	-20	1119	multi-exon	FALSE	canonical	3	1564	junction_6	89.7352113903194	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACGAGAAAGACGTCAGT	NA	False	NA	NA	False	NA	NA	NA	21061258	21051129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
ENSMUSG00000019478.18_124532724_124562030_1	chr8	+	1389	8	NNC	ENSMUSG00000019478.18	novel	1419	8	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	159.435483721121	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACACTGTCCTGCTCTGTG	NA	False	NA	16	True	AATAAA	-25	NA	124532723	124562030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124557009_124557131_124559541_124559638_124560753_124560887_124561432
ENSMUSG00000019494.15_138159362_138162243_1	chr5	+	1075	10	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	384	junction_7	1362.24839561587	1063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCCTTCCAGTGGCTTT	NA	False	NA	14	True	AATAAA	-15	NA	138159361	138162243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161606_138161682_138161770_138161872_138161997
ENSMUSG00000019494.15_138159362_138162243_2	chr5	+	1099	10	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1485.26810149997	6113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCCTTCCAGTGGCTTT	NA	False	NA	14	True	AATAAA	-15	NA	138159361	138162243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161878_138161997
ENSMUSG00000019494.15_138159362_138162243_3	chr5	+	1086	10	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1493.25654564482	5385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCCTTCCAGTGGCTTT	NA	False	NA	14	True	AATAAA	-15	NA	138159361	138162243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_138159445_138159643_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ENSMUSG00000019494.15_138159362_138162243_4	chr5	+	1085	10	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1468.94883051339	2132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCCTTCCAGTGGCTTT	NA	False	NA	14	True	AATAAA	-15	NA	138159361	138162243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_138159445_138159636_138159760_138159935_138160068_138160406_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ENSMUSG00000019494.15_138159362_138162243_5	chr5	+	1085	10	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1902.73949353213	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCCTTCCAGTGGCTTT	NA	False	NA	14	True	AATAAA	-15	NA	138159361	138162243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_138159445_138159636_138159760_138160139_138160264_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ENSMUSG00000019494.15_138162862_138170114_1	chr5	+	2365	15	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	1823	7206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGGCGCGAAACGTCG	675	False	NA	NA	False	NA	NA	NA	138162861	138170114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_138163183_138163313_138163424_138164171_138164341_138164944_138165019_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ENSMUSG00000019494.15_138162862_138170114_3	chr5	+	2367	15	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	1823	7206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGGCGCGAAACGTCG	675	False	NA	NA	False	NA	NA	NA	138162861	138170114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167724_138167817_138167987_138168578_138168659_138169987
ENSMUSG00000019494.15_138162862_138170114_4	chr5	+	2374	15	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	1823	7206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGGCGCGAAACGTCG	675	False	NA	NA	False	NA	NA	NA	138162861	138170114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165697_138165808_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ENSMUSG00000019494.15_138162862_138170114_5	chr5	+	2369	15	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	1823	7206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGGCGCGAAACGTCG	675	False	NA	NA	False	NA	NA	NA	138162861	138170114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166735_138167067_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ENSMUSG00000019494.15_138162862_138170114_6	chr5	+	2362	15	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	1823	7206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGGCGCGAAACGTCG	675	False	NA	NA	False	NA	NA	NA	138162861	138170114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166422_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ENSMUSG00000019494.15_138162862_138170114_7	chr5	+	2364	15	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	1823	7206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1891	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGGCGCGAAACGTCG	675	False	NA	NA	False	NA	NA	NA	138162861	138170114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168648_138169987
ENSMUSG00000019494.15_138162862_138170114_8	chr5	+	2370	15	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	1823	7206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGGCGCGAAACGTCG	675	False	NA	NA	False	NA	NA	NA	138162861	138170114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166230_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ENSMUSG00000019505.8_62442330_62444039_1	chr11	+	1166	2	FSM	ENSMUSG00000019505.8	ENSMUST00000019649.4	1499	2	333	0	-172	0	multi-exon	FALSE	canonical	3	35417	junction_1	0	77884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCACTTGTGAAAT	NA	False	NA	25	True	AATAAA	-24	NA	62442329	62444039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_62442422_62442965
ENSMUSG00000019518.12_138176879_138185478_1	chr5	+	2380	15	NIC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	2048	6787	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCTGACAGGAGTAGGT	4714	False	NA	NA	False	NA	NA	NA	138176878	138185478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185345
ENSMUSG00000019518.12_138176879_138185478_2	chr5	+	2401	15	NNC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	2048	6787	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCTGACAGGAGTAGGT	4714	False	NA	NA	False	NA	NA	NA	138176878	138185478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185324
ENSMUSG00000019518.12_138176879_138185478_3	chr5	+	2502	15	NIC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	2048	6787	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCTGACAGGAGTAGGT	4714	False	NA	NA	False	NA	NA	NA	138176878	138185478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185223
ENSMUSG00000019518.12_138176879_138185478_4	chr5	+	2294	15	NIC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	2048	6787	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCTGACAGGAGTAGGT	4714	False	NA	NA	False	NA	NA	NA	138176878	138185478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ENSMUSG00000019539.12_44732337_44741621_1	chr7	-	1438	7	FSM	ENSMUSG00000019539.12	ENSMUST00000019683.11	1462	7	24	0	-12	0	multi-exon	FALSE	canonical	3	94	junction_6	35.1362427637839	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTGTCTGTCTGTC	6684	False	NA	-4	True	AATAAA	-25	NA	44741621	44732336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741519
ENSMUSG00000019578.12_56375250_56381848_1	chr17	-	1564	11	FSM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	180	1205	0	0	multi-exon	FALSE	canonical	3	209	junction_10	25.0960156200143	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCCAGTGTTTCATCA	6486	False	NA	-2	True	AATAAA	-17	NA	56381848	56375249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
ENSMUSG00000019578.12_56375250_56382017_1	chr17	-	1733	11	FSM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	11	1205	0	0	multi-exon	FALSE	canonical	3	209	junction_10	25.0960156200143	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCCAGTGTTTCATCA	6317	False	NA	-2	True	AATAAA	-17	NA	56382017	56375249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
ENSMUSG00000019578.12_56375536_56382017_1	chr17	-	1447	11	FSM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	11	1491	0	0	multi-exon	FALSE	canonical	3	209	junction_10	25.0960156200143	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGCTCCAGTCTCATG	6317	False	NA	-17	True	AATAAA	-15	NA	56382017	56375535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
ENSMUSG00000019579.14_56483268_56490920_1	chr17	-	1186	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	0	524	0	-524	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	4597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTATGCTCTCTCTGTGTG	NA	False	NA	1	True	AATGAA	-22	NA	56490920	56483267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
ENSMUSG00000019579.14_56483547_56490920_1	chr17	-	907	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	0	803	0	-803	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	4257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGATGGATTCTCATC	NA	False	NA	-6	True	AATAAA	-43	NA	56490920	56483546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
ENSMUSG00000019579.14_56483547_56490920_2	chr17	-	900	6	NNC	ENSMUSG00000019579.14	novel	1710	6	NA	NA	0	-803	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	476.623541172695	4144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGATGGATTCTCATC	NA	False	NA	-6	True	AATAAA	-43	NA	56490920	56483546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_56484004_56484698_56484772_56485263_56485339_56486363_56486426_56489664_56489716_56490738
ENSMUSG00000019579.14_56483547_56490920_3	chr17	-	683	7	NNC	ENSMUSG00000019579.14	novel	1710	6	NA	NA	0	-803	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	449.982098409358	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGATGGATTCTCATC	NA	False	NA	-6	True	AATAAA	-43	NA	56490920	56483546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_56483627_56483850_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
ENSMUSG00000019590.17_105824528_105834971_1	chr11	-	2753	7	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	64.1320252811859	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105834971	105824527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105834936
ENSMUSG00000019590.17_105824528_105834971_2	chr11	-	2474	6	FSM	ENSMUSG00000019590.17	ENSMUST00000019734.11	2741	6	267	0	-6	0	multi-exon	FALSE	canonical	3	87	junction_5	37.6690854680599	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105834971	105824527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105834936
ENSMUSG00000019590.17_105824528_105835869_1	chr11	-	2485	6	NNC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-556	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	67.416318499307	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105835869	105824527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105835823
ENSMUSG00000019710.14_87826843_87830741_1	chr3	+	930	7	NIC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	0	-228	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	364.828460451697	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87826842	87830741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_87826959_87827109_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUSG00000019710.14_87826843_87830741_2	chr3	+	984	7	NIC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	0	-228	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	348.953992510315	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87826842	87830741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_87827013_87827109_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUSG00000019710.14_87826843_87830741_3	chr3	+	983	6	NNC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	0	-228	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	402.013233613024	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87826842	87830741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_87827038_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUSG00000019710.14_87826843_87830741_4	chr3	+	1081	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	30	228	0	-228	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	2207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87826842	87830741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUSG00000019710.14_87826843_87830974_1	chr3	+	1217	7	NIC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	348.953992510315	1766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGTCTTAAAAGCTTTA	NA	False	NA	21	True	AATAAA	-23	NA	87826842	87830974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_87827013_87827109_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUSG00000019710.14_87827007_87830741_1	chr3	+	917	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	194	228	137	-228	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87827006	87830741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUSG00000019710.14_87827007_87830741_2	chr3	+	820	7	NIC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	137	-228	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	348.953992510315	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87827006	87830741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_87827013_87827109_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUSG00000019710.14_87830966_87837451_1	chr3	+	1738	8	NIC	ENSMUSG00000019710.14	novel	1226	6	NA	NA	2050	6472	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCGCACTTGCCCAACGT	NA	False	NA	NA	False	NA	NA	NA	87830965	87837451	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
ENSMUSG00000019715.15_29825440_29848613_1	chr2	+	2258	16	FSM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	2	1770	0	384	multi-exon	FALSE	canonical	3	458	junction_9	44.6713430387859	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTCAGTGTGTTTTTATA	NA	False	NA	-51	True	NA	NA	NA	29825439	29848613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ENSMUSG00000019715.15_29825440_29848668_1	chr2	+	2108	16	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	0	439	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	136.66595121764	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCTGTCATTCTCTTG	NA	False	NA	4	True	NA	NA	NA	29825439	29848668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830195_29832600_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ENSMUSG00000019715.15_29825440_29848941_2	chr2	+	2586	16	FSM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	2	1442	0	712	multi-exon	FALSE	canonical	3	458	junction_9	44.6713430387859	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCAGGTACTGTTTGCAG	NA	False	NA	7	True	AATAAA	-20	NA	29825439	29848941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ENSMUSG00000019715.15_29825440_29849434_1	chr2	+	3079	16	FSM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	2	949	0	-949	multi-exon	FALSE	canonical	3	458	junction_9	44.6713430387859	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATATGTGGTTACC	NA	False	NA	10	True	AATAAA	-20	NA	29825439	29849434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ENSMUSG00000019715.15_29825440_29849434_2	chr2	+	2874	16	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	0	-949	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	136.66595121764	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATATGTGGTTACC	NA	False	NA	10	True	AATAAA	-20	NA	29825439	29849434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830195_29832600_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ENSMUSG00000019734.17_3668790_3670220_1	chr7	-	627	4	ISM	ENSMUSG00000019734.17_ENSMUSG00000078813.4	ENSMUST00000136678.3	1529	6	3261	-167	-338	0	3prime_fragment	FALSE	canonical	3	25	junction_3	7.48331477354788	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCGTTTTGAAACCCC	7322	False	NA	-13	True	AATAAA	-15	NA	3670220	3668789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_3669008_3669100_3669180_3669817_3669974_3670046
ENSMUSG00000019737.15_30014241_30018467_1	chr7	+	1286	8	NIC	ENSMUSG00000019737.15	novel	1355	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	69.7438461918516	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATGTCTGAGAATATCAG	NA	False	NA	7	True	ATTAAA	-14	NA	30014240	30018467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_30014512_30014686_30014826_30015719_30015799_30015997_30016193_30016267_30016517_30017392_30017468_30018097_30018157_30018248
ENSMUSG00000019738.16_29931373_29932812_1	chr7	+	557	6	NNC	ENSMUSG00000019738.16	novel	819	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	483.259764515938	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	False	NA	15	True	AATAAA	-15	NA	29931372	29932812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_29931571_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ENSMUSG00000019738.16_29931373_29932812_2	chr7	+	398	6	NNC	ENSMUSG00000019738.16	novel	819	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	484.853957393358	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	False	NA	15	True	AATAAA	-15	NA	29931372	29932812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_29931412_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ENSMUSG00000019738.16_29931373_29932812_3	chr7	+	793	7	NNC	ENSMUSG00000019738.16	novel	819	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	152	junction_1	393.380823404271	5385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	False	NA	15	True	AATAAA	-15	NA	29931372	29932812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_29931625_29931647_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ENSMUSG00000019738.16_29931457_29932812_2	chr7	+	709	7	NNC	ENSMUSG00000019738.16	novel	819	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	152	junction_1	393.380823404271	4727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	False	NA	15	True	AATAAA	-15	NA	29931456	29932812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_29931625_29931647_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ENSMUSG00000019738.16_29931767_29932812_1	chr7	+	507	5	NIC	ENSMUSG00000019738.16	novel	819	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	1146	junction_4	33.3391661563393	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	False	NA	15	True	AATAAA	-15	NA	29931766	29932812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932544_29932709
ENSMUSG00000019763.12_4353171_4382334_1	chr10	-	1734	12	NIC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_11	34.497095338258	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTTTCAGCTCTTAAT	5716	False	NA	-5	True	NA	NA	NA	4382334	4353170	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4382265
ENSMUSG00000019763.12_4375326_4382334_1	chr10	-	2530	3	FSM	ENSMUSG00000019763.12	ENSMUST00000156940.8	1772	3	10	-768	0	768	multi-exon	FALSE	canonical	3	145	junction_2	8	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTTCCAATGTCTGTT	5716	False	NA	NA	False	AATAGA	-16	NA	4382334	4375325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_4377692_4379076_4379172_4382265
ENSMUSG00000019767.13_4432502_4471106_1	chr10	+	1010	5	ISM	ENSMUSG00000019767.13	ENSMUST00000138112.8	3350	11	0	41125	0	6794	5prime_fragment	FALSE	canonical	2	4	junction_1	3.41869858279434	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTTGTTTGTTTGT	3207	False	NA	NA	False	ATTAAA	-18	NA	4432501	4471106	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_4432629_4462751_4462881_4464055_4464313_4468905_4469051_4470754
ENSMUSG00000019773.8_5749160_5755420_1	chr10	-	1757	5	NNC	ENSMUSG00000019773.8	novel	1940	5	NA	NA	180	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	339.359230757025	3387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGTGTGCAGGTTTTT	NA	False	NA	-9	True	AATAAA	-45	NA	5755420	5749159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752524_5755252
ENSMUSG00000019773.8_5749160_5755420_2	chr10	-	1760	5	FSM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	180	0	180	0	multi-exon	FALSE	canonical	3	762	junction_1	15.5623744974859	3388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGTGTGCAGGTTTTT	NA	False	NA	-9	True	AATAAA	-45	NA	5755420	5749159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755258
ENSMUSG00000019791.13_30484379_30494362_1	chr10	-	625	6	NNC	ENSMUSG00000019791.13	novel	616	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	102.052927444537	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGGACAAGTTCCTTAC	NA	False	NA	-32	True	AATAAA	-8	NA	30494362	30484378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_30484420_30486312_30486440_30487643_30487714_30489273_30489379_30490708_30490827_30494198
ENSMUSG00000019791.13_30484379_30494475_1	chr10	-	633	5	FSM	ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	0	242	0	0	multi-exon	FALSE	canonical	3	129	junction_1	42.7492689995981	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGGACAAGTTCCTTAC	NA	False	NA	-32	True	AATAAA	-8	NA	30494475	30484378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
ENSMUSG00000019792.9_30410711_30476678_1	chr10	-	1645	12	NIC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	51.2211216763663	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATACTCAGTATTT	NA	False	NA	-2	True	AATAAA	-23	NA	30476678	30410710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
ENSMUSG00000019792.9_30410711_30476678_2	chr10	-	1802	13	FSM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	67	490	-5	0	multi-exon	FALSE	canonical	3	159	junction_10	17.7080882335979	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATACTCAGTATTT	NA	False	NA	-2	True	AATAAA	-23	NA	30476678	30410710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
ENSMUSG00000019792.9_30410711_30476678_3	chr10	-	1720	12	NIC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	52.8487628572059	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATACTCAGTATTT	NA	False	NA	-2	True	AATAAA	-23	NA	30476678	30410710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30470110_30470185_30473735_30473802_30476585
ENSMUSG00000019792.9_30470148_30476678_1	chr10	-	196	3	ISM	ENSMUSG00000019792.9	ENSMUST00000216705.2	666	5	-32	4197	-5	2175	5prime_fragment	FALSE	canonical	3	190	junction_1	8.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGCAAGAAACTTAATGAAA	NA	False	NA	NA	False	NA	NA	NA	30476678	30470147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_30470185_30473735_30473802_30476585
ENSMUSG00000019795.18_7505145_7539067_1	chr10	-	2444	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	305	8	0	0	multi-exon	FALSE	canonical	3	339	junction_1	146.985630284746	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACCAGTCTGGATCCTT	NA	False	NA	-8	True	AATAAA	-12	NA	7539067	7505144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUSG00000019795.18_7505958_7539067_1	chr10	-	1631	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	305	821	0	-813	multi-exon	FALSE	canonical	3	339	junction_1	146.985630284746	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCATTGGTGGCCTTTGA	NA	False	NA	-1	True	AATAAA	-14	NA	7539067	7505957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUSG00000019795.18_7505958_7539067_2	chr10	-	1678	8	FSM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	0	813	0	-813	multi-exon	FALSE	canonical	3	173	junction_1	203.876012741638	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCATTGGTGGCCTTTGA	NA	False	NA	-1	True	AATAAA	-14	NA	7539067	7505957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUSG00000019795.18_7506449_7539067_1	chr10	-	1140	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	305	1312	0	-1304	multi-exon	FALSE	canonical	3	339	junction_1	146.985630284746	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTTTGAAGAGTGGCTT	NA	False	NA	-9	True	ATTAAA	-26	NA	7539067	7506448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUSG00000019795.18_7506449_7539067_2	chr10	-	1187	8	FSM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	0	1304	0	-1304	multi-exon	FALSE	canonical	3	173	junction_1	203.876012741638	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTTTGAAGAGTGGCTT	NA	False	NA	-9	True	ATTAAA	-26	NA	7539067	7506448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUSG00000019797.12_43401155_43416962_1	chr10	-	828	4	NNC	ENSMUSG00000019797.12	novel	860	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	444.703146929375	3521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATAAAGTTCTCCTGT	NA	False	NA	-38	True	CATAAA	-16	NA	43416962	43401154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_43401405_43406593_43406667_43408671_43409146_43416931
ENSMUSG00000019804.13_42378286_42411054_1	chr10	+	830	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	259	312	0	271	multi-exon	FALSE	canonical	3	2006	junction_3	141.176800108548	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGTTTCTGTGTCATG	NA	False	NA	19	True	ACTAAA	-19	NA	42378285	42411054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
ENSMUSG00000019804.13_42378286_42411366_1	chr10	+	1142	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	259	0	0	0	multi-exon	FALSE	canonical	3	2006	junction_3	141.176800108548	3430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	False	NA	12	True	AATAAA	-13	NA	42378285	42411366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
ENSMUSG00000019808.9_13399886_13428864_1	chr10	+	2084	12	NIC	ENSMUSG00000019808.9	novel	1466	6	NA	NA	-28752	-10256	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGGGACGCCTGGGTCC	NA	False	NA	NA	False	NA	NA	NA	13399885	13428864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
ENSMUSG00000019808.9_13400517_13428864_1	chr10	+	1453	12	NIC	ENSMUSG00000019808.9	novel	1466	6	NA	NA	-28121	-10256	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGGGACGCCTGGGTCC	NA	False	NA	NA	False	NA	NA	NA	13400516	13428864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
ENSMUSG00000019808.9_13428997_13438763_1	chr10	+	743	6	NNC	ENSMUSG00000019808.9	novel	1466	6	NA	NA	359	-357	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	328.833453286006	2986	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTGGCAATGTAAACAAC	NA	False	NA	17	True	TTTAAA	-3	NA	13428996	13438763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_13429106_13432602_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
ENSMUSG00000019808.9_13428997_13438763_2	chr10	+	750	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	359	357	359	-357	multi-exon	FALSE	non_canonical	0	0	junction_3	288.190631353623	3210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTGGCAATGTAAACAAC	NA	False	NA	17	True	TTTAAA	-3	NA	13428996	13438763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
ENSMUSG00000019810.16_13376828_13391264_1	chr10	+	2143	7	FSM	ENSMUSG00000019810.16	ENSMUST00000121465.3	5741	7	83	3515	0	22	multi-exon	FALSE	canonical	3	139	junction_3	15.7418409201578	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGTAATTATCTTTTCAT	NA	False	NA	15	True	AATGAA	-28	NA	13376827	13391264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450
ENSMUSG00000019810.16_13376828_13391372_1	chr10	+	2251	7	FSM	ENSMUSG00000019810.16	ENSMUST00000121465.3	5741	7	83	3407	0	85	multi-exon	FALSE	canonical	3	139	junction_3	15.7418409201578	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTATAATATTTTAGT	NA	False	NA	14	True	AATACA	-24	NA	13376827	13391372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450
ENSMUSG00000019813.17_41594837_41628226_1	chr10	-	2366	11	NNC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	-5592	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_10	58.0965575572254	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	5920	False	NA	4	True	AATAAA	-25	NA	41628226	41594836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41628007
ENSMUSG00000019813.17_41594837_41685626_1	chr10	-	2118	10	ISM	ENSMUSG00000019813.17	ENSMUST00000189770.7	2232	11	238	0	0	0	3prime_fragment	FALSE	canonical	3	43	junction_4	55.5797724996344	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	367	False	NA	4	True	AATAAA	-25	NA	41685626	41594836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
ENSMUSG00000019814.6_13054341_13068912_1	chr10	-	1840	11	FSM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	0	457	0	-457	multi-exon	FALSE	canonical	3	645	junction_7	42.5845042239545	2703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAATTGGTGTGCTCATTT	NA	False	NA	-19	True	GATAAA	-29	NA	13068912	13054340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
ENSMUSG00000019814.6_13054393_13068912_1	chr10	-	1788	11	FSM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	0	509	0	-509	multi-exon	FALSE	canonical	3	645	junction_7	42.5845042239545	2571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAGTCAAATGTTTGGA	NA	False	NA	-71	True	AATAAA	-8	NA	13068912	13054392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
ENSMUSG00000019818.16_41395497_41407044_1	chr10	+	2830	6	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	664.537433106669	2768	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATATTTTGATTATGA	NA	False	NA	20	True	AATAAA	-25	NA	41395496	41407044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402827_41402880_41404667
ENSMUSG00000019820.12_12259932_12424640_1	chr10	-	3770	25	FSM	ENSMUSG00000019820.12	ENSMUST00000219003.2	5751	25	-17	1998	-17	0	multi-exon	TRUE	canonical	3	61	junction_24	17.9698339045066	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCTATCCAGCCAGCCAA	NA	False	NA	NA	False	NA	NA	NA	12424640	12259931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
ENSMUSG00000019822.13_41352332_41363028_1	chr10	-	3404	23	NIC	ENSMUSG00000019822.13	novel	4150	6	NA	NA	1213	9306	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGGTCCCGCCCACGC	NA	False	NA	NA	False	NA	NA	NA	41363028	41352331	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_41352537_41354005_41354311_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ENSMUSG00000019823.18_41352332_41363028_1	chr10	+	3335	23	NIC	ENSMUSG00000019823.18	novel	3292	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	71	junction_2	35.4241128130973	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTATGCTCTGTGCTGG	9115	False	NA	31	True	AATAAA	-20	NA	41352331	41363028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ENSMUSG00000019826.12_41326379_41328179_1	chr10	+	1243	2	FSM	ENSMUSG00000019826.12	ENSMUST00000216656.2	2476	2	-52	1285	0	-1285	multi-exon	FALSE	canonical	3	104	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCGTTGTCACCTCACA	NA	False	NA	10	True	AATAAA	-19	NA	41326378	41328179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_41326527_41327084
ENSMUSG00000019837.9_40125198_40133672_1	chr10	-	1032	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-5	1499	0	148	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTGCAGCGAACACTT	8581	False	NA	-12	True	NA	NA	NA	40133672	40125197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
ENSMUSG00000019837.9_40125520_40133672_1	chr10	-	710	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-5	1821	0	0	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGTCTTGTATGCAATT	8581	False	NA	-16	True	AAAACA	-21	NA	40133672	40125519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
ENSMUSG00000019842.7_39489239_39530821_1	chr10	+	2076	9	FSM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	309	482	309	0	multi-exon	FALSE	canonical	3	53	junction_2	7.56534037568701	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTTTATCTCAGTGG	NA	False	NA	5	True	AATAAA	-18	NA	39489238	39530821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_39489343_39501845_39502656_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
ENSMUSG00000019843.15_39409266_39440419_1	chr10	+	1087	5	NIC	ENSMUSG00000019843.15	novel	333	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	54.9152756525905	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGGACAGGTGTTTGG	NA	False	NA	NA	False	AATAAA	-27	NA	39409265	39440419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_39409330_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ENSMUSG00000019853.7_18416506_18421635_1	chr10	-	1086	4	FSM	ENSMUSG00000019853.7	ENSMUST00000020000.7	2535	4	189	1260	0	0	multi-exon	FALSE	canonical	3	26	junction_2	0.471404520791032	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTTGCCTCCGCTGTT	NA	False	NA	NA	False	AGTAAA	-22	NA	18421635	18416505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_18417081_18420012_18420194_18420825_18420962_18421441
ENSMUSG00000019853.7_18416506_18421672_1	chr10	-	1123	4	FSM	ENSMUSG00000019853.7	ENSMUST00000020000.7	2535	4	152	1260	-37	0	multi-exon	FALSE	canonical	3	26	junction_2	0.471404520791032	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTTGCCTCCGCTGTT	NA	False	NA	NA	False	AGTAAA	-22	NA	18421672	18416505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_18417081_18420012_18420194_18420825_18420962_18421441
ENSMUSG00000019863.8_43764674_43777743_1	chr10	-	949	5	ISM	ENSMUSG00000019863.8	ENSMUST00000154405.2	2290	8	-2	7764	-2	0	5prime_fragment	FALSE	canonical	3	75	junction_2	10.2316909648406	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGCTTCATGAATCTTA	NA	False	NA	NA	False	AATAAA	-13	NA	43777743	43764673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
ENSMUSG00000019864.15_43777803_43822927_1	chr10	+	2050	9	FSM	ENSMUSG00000019864.15	ENSMUST00000054418.12	2981	9	0	931	0	-931	multi-exon	FALSE	canonical	3	128	junction_8	16.985287751463	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTTTAAAAAATACTTT	NA	False	NA	NA	False	AATGAA	-18	NA	43777802	43822927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43797382_43797432_43804318_43804456_43808358_43808543_43811994_43812088_43822416
ENSMUSG00000019864.15_43777803_43823408_1	chr10	+	2531	9	FSM	ENSMUSG00000019864.15	ENSMUST00000054418.12	2981	9	0	450	0	-450	multi-exon	FALSE	canonical	3	128	junction_8	16.985287751463	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTTATGTTAATGTCT	NA	False	NA	NA	False	NA	NA	NA	43777802	43823408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43797382_43797432_43804318_43804456_43808358_43808543_43811994_43812088_43822416
ENSMUSG00000019868.17_14531099_14581244_1	chr10	-	1227	7	FSM	ENSMUSG00000019868.17	ENSMUST00000149485.2	753	7	-41	-433	0	0	multi-exon	FALSE	canonical	3	56	junction_1	226.315168637799	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGATTACCAGAATAG	NA	False	NA	-32	True	ATTAAA	-6	NA	14581244	14531098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_14531590_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ENSMUSG00000019868.17_14531099_14581244_2	chr10	-	1314	8	FSM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	60	600	0	0	multi-exon	FALSE	canonical	3	590	junction_6	66.3663302881692	2382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGATTACCAGAATAG	NA	False	NA	-32	True	ATTAAA	-6	NA	14581244	14531098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ENSMUSG00000019873.9_66849461_66932625_1	chr10	-	838	8	FSM	ENSMUSG00000019873.9	ENSMUST00000020023.9	5430	8	99	4493	0	-2010	multi-exon	FALSE	canonical	3	113	junction_7	23.5068379109447	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTTTCTAACCTGATG	NA	False	NA	-10	True	AATAAA	-16	NA	66932625	66849460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ENSMUSG00000019878.9_57362521_57378752_1	chr10	+	711	7	ISM	ENSMUSG00000019878.9	ENSMUST00000220353.2	2695	10	40	5012	0	-2244	5prime_fragment	FALSE	canonical	3	210	junction_5	16.7903742265224	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATCTATATCAGCACAT	NA	False	NA	NA	False	NA	NA	NA	57362520	57378752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718
ENSMUSG00000019883.12_29222172_29238043_1	chr10	+	1989	4	NIC	ENSMUSG00000019883.12	novel	3856	6	NA	NA	32513	14578	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGACGCGCGCGGCCGTCA	6153	False	NA	NA	False	NA	NA	NA	29222171	29238043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_29223880_29230287_29230444_29237280_29237342_29237979
ENSMUSG00000019883.12_29222172_29238043_2	chr10	+	2009	4	NIC	ENSMUSG00000019883.12	novel	3856	6	NA	NA	32513	14578	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGACGCGCGCGGCCGTCA	6153	False	NA	NA	False	NA	NA	NA	29222171	29238043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_29223880_29230287_29230444_29237280_29237342_29237959
ENSMUSG00000019894.15_103203644_103231231_1	chr10	+	1482	5	NIC	ENSMUSG00000019894.15	novel	3543	12	NA	NA	0	-1788	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	32.0341614530488	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAGTATCATTTATAGT	NA	False	NA	2	True	ATTAAA	-15	NA	103203643	103231231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_103204015_103224757_103225203_103229251_103229410_103229761_103229889_103230850
ENSMUSG00000019894.15_103203644_103231231_2	chr10	+	1352	5	ISM	ENSMUSG00000019894.15	ENSMUST00000179636.3	3543	12	-25	24005	0	-1788	5prime_fragment	FALSE	canonical	3	31	junction_1	35.7596140918774	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAGTATCATTTATAGT	NA	False	NA	2	True	ATTAAA	-15	NA	103203643	103231231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_103204015_103224887_103225203_103229251_103229410_103229761_103229889_103230850
ENSMUSG00000019894.15_103203905_103231231_2	chr10	+	1221	5	NIC	ENSMUSG00000019894.15	novel	3543	12	NA	NA	201	-1788	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	32.0341614530488	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAGTATCATTTATAGT	NA	False	NA	2	True	ATTAAA	-15	NA	103203904	103231231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_103204015_103224757_103225203_103229251_103229410_103229761_103229889_103230850
ENSMUSG00000019894.15_103204094_103231231_1	chr10	+	1069	5	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	390	-1788	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	41.1969355656461	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAGTATCATTTATAGT	NA	False	NA	2	True	ATTAAA	-15	NA	103204093	103231231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_103204182_103224887_103225203_103229251_103229410_103229761_103229889_103230850
ENSMUSG00000019897.9_105677365_105683141_1	chr10	+	823	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	437	553	0	-553	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATTGTTAAATTATTTT	NA	False	NA	12	True	AATGAA	-20	NA	105677364	105683141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
ENSMUSG00000019897.9_105677365_105683285_1	chr10	+	967	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	437	409	0	-409	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	1771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTGAGCTCACAGTGAGA	NA	False	NA	8	True	AATATA	-14	NA	105677364	105683285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
ENSMUSG00000019897.9_105677365_105683694_1	chr10	+	1376	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	437	0	0	0	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	2003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTGTAATAGAAGCGTT	NA	False	NA	NA	False	AATAAA	-18	NA	105677364	105683694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
ENSMUSG00000019916.15_59159190_59207783_1	chr10	+	2628	15	FSM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	72	1343	0	5	multi-exon	FALSE	canonical	3	22	junction_8	56.7996838163088	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTGTGGTATTTTCA	NA	False	NA	23	True	TTTAAA	-3	NA	59159189	59207783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUSG00000019917.11_58999942_59057303_2	chr10	-	2166	10	FSM	ENSMUSG00000019917.11	ENSMUST00000165971.3	2532	10	366	0	366	0	multi-exon	FALSE	canonical	3	22	junction_1	10.8639169436269	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCTATGTATTTCCTAA	NA	False	NA	-29	True	AATAAA	-15	NA	59057303	58999941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_59000767_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
ENSMUSG00000019923.15_72490727_72504997_1	chr10	+	2052	8	FSM	ENSMUSG00000019923.15	ENSMUST00000105431.8	2676	8	0	624	0	0	multi-exon	FALSE	canonical	3	29	junction_7	390.63955932051	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTGATGTTGTTGT	NA	False	NA	13	True	ATTAAA	-14	NA	72490726	72504997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72503730
ENSMUSG00000019923.15_72490727_72505621_1	chr10	+	1763	8	FSM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	-1	-624	0	0	multi-exon	FALSE	canonical	3	212	junction_7	327.562862014955	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTACGTGTTTAGTTG	NA	False	NA	NA	False	TATAAA	-32	NA	72490726	72505621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
ENSMUSG00000019942.14_69174154_69188745_1	chr10	-	1174	8	FSM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	23	3178	-5	0	multi-exon	FALSE	canonical	3	2056	junction_1	102.156542539739	10328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTCTGTATATGTGCA	NA	False	NA	-28	True	TTTAAA	-1	NA	69188745	69174153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
ENSMUSG00000019947.11_67933039_67972469_1	chr10	-	2283	7	FSM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	-13	755	-13	-755	multi-exon	TRUE	canonical	3	87	junction_6	21.5303403492735	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGGGTATCGCCCATGAC	NA	False	NA	NA	False	NA	NA	NA	67972469	67933038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
ENSMUSG00000019947.11_67933039_67972618_1	chr10	-	2432	7	FSM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	-162	755	-162	-755	multi-exon	FALSE	canonical	3	87	junction_6	21.5303403492735	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGGGTATCGCCCATGAC	NA	False	NA	NA	False	NA	NA	NA	67972618	67933038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
ENSMUSG00000019947.11_67933039_68114551_1	chr10	-	2873	10	FSM	ENSMUSG00000019947.11	ENSMUST00000219238.2	7581	10	19	4689	0	-755	multi-exon	FALSE	canonical	3	31	junction_9	46.8506953451172	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGGGTATCGCCCATGAC	5345	False	NA	NA	False	NA	NA	NA	68114551	67933038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_68021855_68022087_68078833_68079060_68113759_68114015_68114519
ENSMUSG00000019948.5_89547833_89568157_1	chr10	-	1700	11	NNC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	91.1333638136989	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATCTGTTTAATGTTTA	NA	False	NA	-18	True	AATAAA	-21	NA	89568157	89547832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_89548423_89550731_89550871_89552934_89553102_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89568035
ENSMUSG00000019952.16_98942965_99033936_1	chr10	+	2881	12	FSM	ENSMUSG00000019952.16	ENSMUST00000020113.15	2862	12	67	-86	0	0	multi-exon	FALSE	canonical	3	64	junction_11	10.2158522093674	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGTCTTCTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	98942964	99033936	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ENSMUSG00000019969.15_83734946_83781869_1	chr12	+	2665	12	NNC	ENSMUSG00000019969.15	novel	2690	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	94.5865295390836	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTCTCTGTCCTGGCTGG	3365	False	NA	9	True	ATTAAA	-20	NA	83734945	83781869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771274_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ENSMUSG00000019970.16_21870582_21875792_1	chr10	+	2423	12	NNC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	279.30004009433	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATAAATTGTGTCATG	NA	False	NA	8	True	AATAAA	-14	NA	21870581	21875792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872127_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ENSMUSG00000019970.16_21870582_21875792_2	chr10	+	2424	12	NNC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	280.256051755274	3289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATAAATTGTGTCATG	NA	False	NA	8	True	AATAAA	-14	NA	21870581	21875792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_21870725_21870864_21870941_21871372_21871449_21871697_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ENSMUSG00000019971.11_100408127_100425097_1	chr10	+	2404	7	Fusion	ENSMUSG00000019971.11_ENSMUSG00000112000.2	novel	2170	2	NA	NA	331	5524	multi-exon	FALSE	non_canonical	0	0	junction_1	0	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGAGGCGGGGACTCAC	NA	False	NA	NA	False	NA	NA	NA	100408126	100425097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr10_+_100409623_100411578_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
ENSMUSG00000019977.17_21171917_21244784_1	chr10	+	2795	18	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	88	junction_17	229.173164005618	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGCAAAAATGTGTTT	NA	False	NA	14	True	AATAAA	-16	NA	21171916	21244784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243731_21244187
ENSMUSG00000019998.7_24025225_24064182_1	chr10	+	1497	10	FSM	ENSMUSG00000019998.7	ENSMUST00000220041.2	3435	10	0	1938	0	-677	multi-exon	FALSE	canonical	3	188	junction_6	15.4632180063243	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGATGTGTATGTATATA	NA	False	NA	14	True	AATAAA	-15	NA	24025224	24064182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_24025307_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
ENSMUSG00000019998.7_24025225_24064859_1	chr10	+	2174	10	FSM	ENSMUSG00000019998.7	ENSMUST00000220041.2	3435	10	0	1261	0	0	multi-exon	FALSE	canonical	3	188	junction_6	15.4632180063243	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTCCCAAGAACTCT	NA	False	NA	23	True	AATAAA	-25	NA	24025224	24064859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_24025307_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
ENSMUSG00000020018.7_93419259_93425568_1	chr10	-	484	4	NNC	ENSMUSG00000020018.7	novel	861	4	NA	NA	0	-368	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1145.16151214092	13162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTTGACTTGTGGACTA	NA	False	NA	-9	True	AATAAA	-20	NA	93425568	93419258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_93419393_93419891_93419957_93423859_93423986_93425409
ENSMUSG00000020018.7_93419259_93425568_2	chr10	-	480	4	NNC	ENSMUSG00000020018.7	novel	861	4	NA	NA	0	-368	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1029.16287448694	9202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTTGACTTGTGGACTA	NA	False	NA	-9	True	AATAAA	-20	NA	93425568	93419258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_93419393_93419891_93419944_93423859_93423986_93425400
ENSMUSG00000020018.7_93419259_93425568_3	chr10	-	472	4	NNC	ENSMUSG00000020018.7	novel	861	4	NA	NA	0	-368	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1145.16151214092	4991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTTGACTTGTGGACTA	NA	False	NA	-9	True	AATAAA	-20	NA	93425568	93419258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_93419393_93419891_93419957_93423859_93423965_93425400
ENSMUSG00000020027.19_95223638_95252719_1	chr10	-	1455	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	0	-109	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	175.888281303787	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATTTCGGTCACTGTTG	NA	False	NA	NA	False	NA	NA	NA	95252719	95223637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95252479
ENSMUSG00000020034.8_84412761_84450223_1	chr10	+	2454	10	FSM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	271	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.1308895119123	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAATCTTTTCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84412760	84450223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_84412877_84420611_84420920_84422967_84423104_84425747_84425869_84426951_84427173_84430511_84430649_84440370_84440553_84440749_84440932_84444328_84444502_84449345
ENSMUSG00000020038.11_84967564_84982308_1	chr10	-	1397	7	ISM	ENSMUSG00000020038.11	ENSMUST00000020227.11	3026	13	38620	0	-2003	0	3prime_fragment	FALSE	canonical	3	240	junction_6	13.29995822884	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTGTACTTGTGTTCAT	NA	False	NA	-5	True	ATTAAA	-19	NA	84982308	84967563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207
ENSMUSG00000020048.14_86526704_86541326_1	chr10	-	2770	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	880.689577256305	4219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	-40	True	AATAAA	-16	NA	86541326	86526703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539458_86540157_86540261_86541170
ENSMUSG00000020048.14_86526704_86541326_2	chr10	-	2768	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	877.945092118571	2672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	-40	True	AATAAA	-16	NA	86541326	86526703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537883_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ENSMUSG00000020048.14_86526704_86541326_3	chr10	-	2773	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	881.160535472031	4213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	-40	True	AATAAA	-16	NA	86541326	86526703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531823_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ENSMUSG00000020048.14_86526704_86541326_4	chr10	-	2768	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	870.563457517035	2502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	-40	True	AATAAA	-16	NA	86541326	86526703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_86526983_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ENSMUSG00000020048.14_86526704_86541326_5	chr10	-	2763	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	1168.92806305991	2168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	-40	True	AATAAA	-16	NA	86541326	86526703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538879_86539323_86539462_86540157_86540261_86541170
ENSMUSG00000020056.17_88037046_88081871_1	chr10	+	801	7	NNC	ENSMUSG00000020056.17	novel	838	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	159.335774039884	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTTGTTGACCAAATA	NA	False	NA	16	True	AATAAA	-19	NA	88037045	88081871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055114_88055223_88070255_88070321_88081625
ENSMUSG00000020056.17_88037046_88081871_2	chr10	+	805	7	NNC	ENSMUSG00000020056.17	novel	1052	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	135.967418482844	1451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTTGTTGACCAAATA	NA	False	NA	16	True	AATAAA	-19	NA	88037045	88081871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_88037155_88037680_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88070255_88070321_88081617
ENSMUSG00000020056.17_88037046_88081871_3	chr10	+	804	7	NNC	ENSMUSG00000020056.17	novel	1052	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	144.466451315022	1783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTTGTTGACCAAATA	NA	False	NA	16	True	AATAAA	-19	NA	88037045	88081871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055119_88055223_88070255_88070321_88081617
ENSMUSG00000020056.17_88037046_88081871_4	chr10	+	802	7	NNC	ENSMUSG00000020056.17	novel	1052	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	140.86331041908	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTTGTTGACCAAATA	NA	False	NA	16	True	AATAAA	-19	NA	88037045	88081871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_88037155_88037673_88037773_88049518_88049575_88051828_88051937_88055111_88055223_88070255_88070321_88081617
ENSMUSG00000020059.10_88295526_88309098_1	chr10	+	1051	7	ISM	ENSMUSG00000020059.10	ENSMUST00000123244.8	927	8	0	0	0	0	intron_retention	FALSE	canonical	3	14	junction_4	41.5869236926972	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295525	88309098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88303144_88303245_88305407_88305507_88308537
ENSMUSG00000020067.9_62951574_62958463_1	chr10	-	2315	4	FSM	ENSMUSG00000020067.9	ENSMUST00000218978.2	1833	4	0	-482	0	0	multi-exon	FALSE	canonical	3	18	junction_3	3.29983164553722	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCATG	NA	False	NA	NA	False	AATAAA	-12	NA	62958463	62951573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62952806_62954199_62954334_62955807_62955974_62957680
ENSMUSG00000020069.17_62851207_62859673_1	chr10	-	1531	10	NNC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_9	143.298789980504	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGATGTTGCTACTTTT	5781	False	NA	-6	True	AATAAA	-15	NA	62859673	62851206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859416
ENSMUSG00000020069.17_62851207_62859673_2	chr10	-	1486	10	NNC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_9	155.339612017439	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGATGTTGCTACTTTT	5781	False	NA	-6	True	AATAAA	-15	NA	62859673	62851206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859416
ENSMUSG00000020069.17_62851207_62859673_3	chr10	-	1310	9	FSM	ENSMUSG00000020069.17	ENSMUST00000140743.8	1633	9	323	0	0	0	multi-exon	FALSE	canonical	3	177	junction_7	118.49762655851	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGATGTTGCTACTTTT	5781	False	NA	-6	True	AATAAA	-15	NA	62859673	62851206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62855171_62855307_62859498
ENSMUSG00000020069.17_62851207_62859673_4	chr10	-	1449	10	FSM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	0	764	0	0	multi-exon	FALSE	canonical	3	275	junction_6	80.8621750760186	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGATGTTGCTACTTTT	5781	False	NA	-6	True	AATAAA	-15	NA	62859673	62851206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859498
ENSMUSG00000020070.19_62816002_62849111_1	chr10	+	3526	18	FSM	ENSMUSG00000020070.19	ENSMUST00000119567.8	4130	18	-19	623	0	-623	multi-exon	FALSE	canonical	3	50	junction_14	9.76718607764962	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTCATTATATATATATA	NA	False	NA	NA	False	NA	NA	NA	62816001	62849111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
ENSMUSG00000020070.19_62851207_62859673_1	chr10	+	1404	10	Genic_Genomic	ENSMUSG00000020070.19	novel	4502	19	NA	NA	13171	6684	multi-exon	FALSE	non_canonical	0	0	junction_1	0	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGATGGGAGGGGGGCG	NA	False	NA	NA	False	NA	NA	NA	62851206	62859673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr10_+_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859498
ENSMUSG00000020070.19_62851207_62859673_2	chr10	+	1265	9	Genic_Genomic	ENSMUSG00000020070.19	novel	4502	19	NA	NA	13171	6684	multi-exon	FALSE	non_canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGATGGGAGGGGGGCG	NA	False	NA	NA	False	NA	NA	NA	62851206	62859673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr10_+_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62855171_62855307_62859498
ENSMUSG00000020070.19_62851207_62859673_3	chr10	+	1149	8	Genic_Genomic	ENSMUSG00000020070.19	novel	4502	19	NA	NA	13171	6684	multi-exon	FALSE	non_canonical	0	0	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGATGGGAGGGGGGCG	NA	False	NA	NA	False	NA	NA	NA	62851206	62859673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr10_+_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853302_62853390_62853864_62854005_62855171_62855307_62859498
ENSMUSG00000020070.19_62851207_62859673_4	chr10	+	1431	10	Genic_Genomic	ENSMUSG00000020070.19	novel	4502	19	NA	NA	13171	6684	multi-exon	FALSE	non_canonical	0	0	junction_1	0	842	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGATGGGAGGGGGGCG	NA	False	NA	NA	False	NA	NA	NA	62851206	62859673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr10_+_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853837_62854005_62854538_62854678_62855171_62855307_62859498
ENSMUSG00000020072.16_62890114_62894592_1	chr10	+	1407	3	FSM	ENSMUSG00000020072.16	ENSMUST00000130531.2	847	3	125	-685	125	0	multi-exon	FALSE	canonical	2	8	junction_1	1.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAATTTGGTGAAATT	4454	False	NA	NA	False	AATAAA	-16	NA	62890113	62894592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_62890285_62892557_62892621_62893419
ENSMUSG00000020074.8_62612439_62628061_1	chr10	-	841	8	ISM	ENSMUSG00000020074.8	ENSMUST00000217940.2	3178	9	-12	6851	4	204	5prime_fragment	FALSE	canonical	3	241	junction_7	57.6385641878131	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTATTGCAGGCCCAGA	NA	False	NA	NA	False	NA	NA	NA	62628061	62612438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ENSMUSG00000020074.8_62612439_62628061_2	chr10	-	852	8	ISM	ENSMUSG00000020074.8	ENSMUST00000020268.7	4352	25	-51	32732	4	204	5prime_fragment	FALSE	canonical	3	65	junction_7	111.042922386998	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTATTGCAGGCCCAGA	NA	False	NA	NA	False	NA	NA	NA	62628061	62612438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627983
ENSMUSG00000020074.8_62617828_62628061_1	chr10	-	675	6	NNC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	4	-1583	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	144.804696056447	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAACTTGTTGCTGTTCC	NA	False	NA	NA	False	NA	NA	NA	62628061	62617827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_62618072_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ENSMUSG00000020075.9_62417384_62438060_1	chr10	-	3368	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	0	1354	0	-1354	multi-exon	FALSE	canonical	3	474	junction_14	69.0087246776279	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATGTCTAGGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	62438060	62417383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ENSMUSG00000020075.9_62417892_62438060_1	chr10	-	2860	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	0	1862	0	-1862	multi-exon	FALSE	canonical	3	474	junction_14	69.0087246776279	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGTGTCGATCTTGT	NA	False	NA	-2	True	AGTAAA	-21	NA	62438060	62417891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ENSMUSG00000020076.8_62451794_62486965_1	chr10	-	2341	14	NIC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_6	72.4032102331865	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGAGTTTTCT	8138	False	NA	-11	True	ATTAAA	-28	NA	62486965	62451793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
ENSMUSG00000020076.8_62451794_62486965_2	chr10	-	2613	16	NIC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	70.2071854505569	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGAGTTTTCT	8138	False	NA	-11	True	ATTAAA	-28	NA	62486965	62451793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62486803
ENSMUSG00000020077.15_62330207_62350130_1	chr10	-	1333	4	NNC	ENSMUSG00000020077.15	novel	1727	4	NA	NA	-6254	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	4.10960933531265	115	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTGGCTATGTGACATGG	NA	False	NA	-2	True	AATAAA	-21	NA	62350130	62330206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_62330886_62333557_62333703_62343420_62343616_62349816
ENSMUSG00000020078.17_62291051_62322538_1	chr10	-	2549	9	NNC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	348.775155902768	2218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	5244	False	NA	-6	True	AATAAA	-17	NA	62322538	62291050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_62292638_62294702_62294846_62299469_62299532_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ENSMUSG00000020078.17_62291578_62322538_1	chr10	-	2029	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	46	522	-13	-522	multi-exon	FALSE	canonical	3	953	junction_7	50.5010829091813	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAGAACAAAAAACACTA	5244	False	NA	NA	False	TTTAAA	-13	NA	62322538	62291577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ENSMUSG00000020078.17_62292350_62322538_1	chr10	-	1257	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	46	1294	-13	-1294	multi-exon	FALSE	canonical	3	953	junction_7	50.5010829091813	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTCTTGGAAACACTGG	5244	False	NA	-20	True	ATTAAA	-27	NA	62322538	62292349	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ENSMUSG00000020079.16_62265119_62285517_1	chr10	-	2473	15	FSM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	0	131	0	0	multi-exon	FALSE	canonical	2	205	junction_12	41.8359283147773	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTACTATCTGGTTTG	NA	False	NA	16	True	TTTAAA	-45	NA	62285517	62265118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ENSMUSG00000020083.14_61943989_61946792_1	chr10	-	1177	4	FSM	ENSMUSG00000020083.14	ENSMUST00000125704.8	1769	4	37	555	0	0	multi-exon	FALSE	canonical	3	105	junction_3	8.33999733546454	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCGGTGAATGACTGAC	NA	False	NA	-10	True	AATAAA	-21	NA	61946792	61943988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_61944903_61945662_61945792_61946014_61946094_61946737
ENSMUSG00000020086.7_61574444_61619714_1	chr10	-	1963	9	FSM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	212	0	212	0	multi-exon	FALSE	canonical	3	267	junction_7	26.0813031691286	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGCGTCTTTCTTATA	NA	False	NA	-26	True	NA	NA	NA	61619714	61574443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
ENSMUSG00000020088.11_61516109_61527226_1	chr10	+	793	8	NIC	ENSMUSG00000020088.11	novel	897	8	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	573.138691054507	1761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGCTTCCTCATGGAC	NA	False	NA	30	True	AATAAA	-26	NA	61516108	61527226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_61516193_61517877_61517928_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ENSMUSG00000020088.11_61516109_61527226_2	chr10	+	743	7	FSM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	20	1850	0	4	multi-exon	FALSE	canonical	3	1130	junction_5	94.5492229241233	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGCTTCCTCATGGAC	NA	False	NA	30	True	AATAAA	-26	NA	61516108	61527226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ENSMUSG00000020089.9_61484400_61509947_1	chr10	+	1287	11	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1212.87560780156	8723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2121	False	NA	15	True	AATAAA	-16	NA	61484399	61509947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_61484571_61487346_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ENSMUSG00000020089.9_61484400_61509947_2	chr10	+	1034	8	NIC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1396.05104871285	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2121	False	NA	15	True	AATAAA	-16	NA	61484399	61509947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_61484571_61487338_61487398_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ENSMUSG00000020089.9_61484400_61509947_3	chr10	+	1146	10	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1267.38930653568	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2121	False	NA	15	True	AATAAA	-16	NA	61484399	61509947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_61484571_61487338_61487377_61496764_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ENSMUSG00000020089.9_61484400_61509947_4	chr10	+	613	4	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1900.32786644831	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2121	False	NA	15	True	AATAAA	-16	NA	61484399	61509947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_61484571_61487338_61487398_61508179_61508213_61509597
ENSMUSG00000020089.9_61484400_61509947_5	chr10	+	1285	10	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	1267.85956499259	8151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2121	False	NA	15	True	AATAAA	-16	NA	61484399	61509947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506300_61509597
ENSMUSG00000020089.9_61484400_61509947_6	chr10	+	1283	11	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1217.24994968166	8733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2121	False	NA	15	True	AATAAA	-16	NA	61484399	61509947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496702_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ENSMUSG00000020089.9_61484400_61509947_7	chr10	+	693	6	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1590.09302872505	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2121	False	NA	15	True	AATAAA	-16	NA	61484399	61509947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_61484449_61502722_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ENSMUSG00000020092.10_61155435_61219118_1	chr10	-	4091	20	FSM	ENSMUSG00000020092.10	ENSMUST00000020289.10	4282	20	191	0	191	0	multi-exon	FALSE	canonical	3	320	junction_14	26.6759563689748	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGCTGATTGGTCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	61219118	61155434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ENSMUSG00000020092.10_61155435_61219118_2	chr10	-	4043	21	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	191	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	86.6294407231168	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGCTGATTGGTCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	61219118	61155434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ENSMUSG00000020107.11_59823730_59838933_1	chr10	-	1329	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	24	499	0	0	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	1881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	59838933	59823729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
ENSMUSG00000020107.11_59824226_59838933_1	chr10	-	833	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	24	995	0	0	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGGGGATCAGATGGAG	NA	False	NA	NA	False	NA	NA	NA	59838933	59824225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
ENSMUSG00000020107.11_59824226_59838933_2	chr10	-	883	5	FSM	ENSMUSG00000020107.11	ENSMUST00000020307.11	1379	5	0	496	0	0	multi-exon	FALSE	canonical	3	55	junction_3	152.559004978402	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGGGGATCAGATGGAG	NA	False	NA	NA	False	NA	NA	NA	59838933	59824225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838239_59838290_59838777
ENSMUSG00000020107.11_59824408_59838933_1	chr10	-	651	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	24	1177	0	0	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAGATGTTTTTCACATT	NA	False	NA	NA	False	NA	NA	NA	59838933	59824407	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
ENSMUSG00000020109.14_59715440_59733838_1	chr10	+	1747	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	43	1280	0	2	multi-exon	FALSE	canonical	3	91	junction_8	64.4659551623956	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGGGATTCAATTAAGAT	NA	False	NA	22	True	TTTAAA	-5	NA	59715439	59733838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
ENSMUSG00000020109.14_59715440_59734050_1	chr10	+	1959	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	43	1068	0	214	multi-exon	FALSE	canonical	3	91	junction_8	64.4659551623956	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCCAGGCTTATGGTTA	NA	False	NA	9	True	TATAAA	-20	NA	59715439	59734050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
ENSMUSG00000020111.16_59538385_59699945_1	chr10	+	1776	13	NNC	ENSMUSG00000020111.16	novel	1814	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	56.6090393252997	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCGCAAGAGCTCTGTGT	NA	False	NA	18	True	NA	NA	NA	59538384	59699945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59697384_59697475_59699000_59699311_59699881
ENSMUSG00000020111.16_59538440_59586693_1	chr10	+	938	5	FSM	ENSMUSG00000020111.16	ENSMUST00000165405.2	1732	5	-40	834	0	-834	multi-exon	FALSE	canonical	3	163	junction_3	28.4725745235657	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTGGACGCCTACCT	NA	False	NA	NA	False	CATAAA	-32	NA	59538439	59586693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325
ENSMUSG00000020111.16_59538440_59699945_1	chr10	+	2292	12	FSM	ENSMUSG00000020111.16	ENSMUST00000165563.8	2442	12	141	9	0	0	multi-exon	FALSE	canonical	2	105	junction_7	32.1836157690049	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCGCAAGAGCTCTGTGT	NA	False	NA	18	True	NA	NA	NA	59538439	59699945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59697384_59697475_59699000
ENSMUSG00000020116.8_17153198_17161568_1	chr11	-	1538	7	NNC	ENSMUSG00000020116.8	novel	1544	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	558.345696380537	2962	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCAGTCTCTTTTTCTAA	NA	False	NA	48	True	AGTAAA	-19	NA	17161568	17153197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159316_17159395_17160987_17161138_17161312
ENSMUSG00000020116.8_17153446_17161568_1	chr11	-	1296	7	FSM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	0	248	0	-248	multi-exon	FALSE	canonical	3	1392	junction_5	81.0276016072438	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGATGTTAAAATATTT	NA	False	NA	-21	True	AATAAA	-18	NA	17161568	17153445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
ENSMUSG00000020124.11_122947641_123032831_1	chr10	-	4726	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	69	6730	0	0	multi-exon	TRUE	canonical	3	236	junction_15	99.6636747895759	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGTCTTTTATTTCTTA	NA	False	NA	-1	True	AATAAA	-16	NA	123032831	122947640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ENSMUSG00000020124.11_122949133_123032831_1	chr10	-	3147	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	27	1492	0	0	multi-exon	FALSE	canonical	3	255	junction_15	80.7788802843912	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTTCTTTAATTTTT	NA	False	NA	2	True	AATAAA	-32	NA	123032831	122949132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ENSMUSG00000020124.11_122949133_123032831_2	chr10	-	3234	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	69	8222	0	0	multi-exon	FALSE	canonical	3	236	junction_15	99.6636747895759	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTTCTTTAATTTTT	NA	False	NA	2	True	AATAAA	-32	NA	123032831	122949132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ENSMUSG00000020133.9_80154542_80156371_1	chr10	-	1195	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	0	454	0	-454	multi-exon	FALSE	canonical	3	349	junction_1	0	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTTCTCCCTTAAGCCA	8717	False	NA	-16	True	ATTAAA	-18	NA	80156371	80154541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80155382_80156016
ENSMUSG00000020133.9_80154542_80156371_2	chr10	-	1186	2	NNC	ENSMUSG00000020133.9	novel	1649	2	NA	NA	0	-454	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTTCTCCCTTAAGCCA	8717	False	NA	-16	True	ATTAAA	-18	NA	80156371	80154541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_80155373_80156016
ENSMUSG00000020149.18_20151432_20175464_1	chr11	+	1339	5	NIC	ENSMUSG00000020149.18	novel	2827	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	65	junction_2	830.517007652462	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	NA	False	NA	16	True	AATAAA	-29	NA	20151431	20175464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_20151653_20165629_20165703_20173083_20173180_20174366_20174499_20174647
ENSMUSG00000020149.18_20151432_20175464_2	chr11	+	1425	6	NNC	ENSMUSG00000020149.18	novel	2827	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	817.061221696392	2199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	NA	False	NA	16	True	AATAAA	-29	NA	20151431	20175464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174657
ENSMUSG00000020152.8_20012581_20062887_1	chr11	-	3328	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	26	277	-20	-277	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTTTTTAAAAGATCTG	1362	False	NA	-15	True	AATAAA	-15	NA	20062887	20012580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ENSMUSG00000020152.8_20014670_20062887_1	chr11	-	1239	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	26	2366	-20	-2366	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGCCTCTAATGCTTTTT	1362	False	NA	-3	True	GATAAA	-19	NA	20062887	20014669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ENSMUSG00000020153.15_80085294_80092627_1	chr10	+	744	8	NNC	ENSMUSG00000020153.15	novel	983	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	768.810531049791	5005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9700	False	NA	24	True	AATAAA	-15	NA	80085293	80092627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_80085326_80088230_80088268_80088907_80088992_80089500_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUSG00000020153.15_80085294_80092627_2	chr10	+	775	8	NNC	ENSMUSG00000020153.15	novel	983	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	794.476621456425	4638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9700	False	NA	24	True	AATAAA	-15	NA	80085293	80092627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_80085326_80088230_80088268_80088883_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUSG00000020153.15_80085294_80092627_3	chr10	+	744	8	NNC	ENSMUSG00000020153.15	novel	983	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	797.620287134787	2250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9700	False	NA	24	True	AATAAA	-15	NA	80085293	80092627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091840_80092469
ENSMUSG00000020153.15_80085294_80092627_4	chr10	+	745	8	NNC	ENSMUSG00000020153.15	novel	983	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	794.476621456425	2428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9700	False	NA	24	True	AATAAA	-15	NA	80085293	80092627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_80085326_80088230_80088272_80088917_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUSG00000020153.15_80085294_80092627_6	chr10	+	739	8	NNC	ENSMUSG00000020153.15	novel	722	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	903.963291651304	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9700	False	NA	24	True	AATAAA	-15	NA	80085293	80092627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_80085326_80088230_80088268_80088912_80088992_80089500_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUSG00000020153.15_80085294_80092627_7	chr10	+	667	7	NIC	ENSMUSG00000020153.15	novel	983	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	164	junction_2	752.472295540212	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9700	False	NA	24	True	AATAAA	-15	NA	80085293	80092627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_80085326_80088230_80088268_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUSG00000020153.15_80085294_80092627_8	chr10	+	739	8	NNC	ENSMUSG00000020153.15	novel	983	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	793.673453644765	1508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9700	False	NA	24	True	AATAAA	-15	NA	80085293	80092627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090935_80090971_80091757_80091847_80092469
ENSMUSG00000020153.15_80085294_80092627_9	chr10	+	731	7	NNC	ENSMUSG00000020153.15	novel	983	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1017.70729529118	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9700	False	NA	24	True	AATAAA	-15	NA	80085293	80092627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_80085326_80088883_80088992_80089500_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUSG00000020156.17_80062514_80079737_1	chr10	+	2496	14	NIC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_1	122.224887305831	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATAGTCATTGCACA	8464	False	NA	19	True	TATAAA	-17	NA	80062513	80079737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_80062641_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ENSMUSG00000020166.16_116321071_116417406_1	chr10	-	2789	17	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_16	168.781466973569	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417406	116321070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385011_116417357
ENSMUSG00000020166.16_116321071_116417406_2	chr10	-	2390	13	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_9	144.203246804255	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417406	116321070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ENSMUSG00000020166.16_116321071_116417406_3	chr10	-	2267	12	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	195.151138715993	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417406	116321070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116384937_116385081_116417357
ENSMUSG00000020166.16_116321414_116417406_2	chr10	-	2458	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	-1	343	0	0	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGAATGTGTATATATTATA	NA	False	NA	-9	True	AATAAA	-12	NA	116417406	116321413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ENSMUSG00000020166.16_116321692_116417406_1	chr10	-	1769	13	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_9	144.203246804255	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGTGAAGATCCTTC	NA	False	NA	-12	True	AATAAA	-19	NA	116417406	116321691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ENSMUSG00000020166.16_116321692_116417406_3	chr10	-	2057	15	FSM	ENSMUSG00000020166.16	ENSMUST00000168036.8	2693	15	10	626	0	0	multi-exon	FALSE	canonical	3	50	junction_13	136.561565692876	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGTGAAGATCCTTC	NA	False	NA	-12	True	AATAAA	-19	NA	116417406	116321691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385081_116417357
ENSMUSG00000020166.16_116321692_116417406_4	chr10	-	2180	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	-1	621	0	0	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGTGAAGATCCTTC	NA	False	NA	-12	True	AATAAA	-19	NA	116417406	116321691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ENSMUSG00000020180.11_75353385_75371297_1	chr10	+	1118	4	FSM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	0	1918	0	45	multi-exon	FALSE	canonical	3	3512	junction_3	116.998575489904	13672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGAGGCTTTTTTG	1402	False	NA	30	True	AATAAA	-17	NA	75353384	75371297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_75353960_75355147_75355295_75368010_75368204_75371094
ENSMUSG00000020180.11_75353848_75371297_1	chr10	+	650	4	NNC	ENSMUSG00000020180.11	novel	3036	4	NA	NA	0	45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1711.5877618944	10263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGAGGCTTTTTTG	1865	False	NA	30	True	AATAAA	-17	NA	75353847	75371297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_75353960_75355147_75355290_75368010_75368204_75371094
ENSMUSG00000020180.11_75353848_75371297_2	chr10	+	643	4	NNC	ENSMUSG00000020180.11	novel	3036	4	NA	NA	0	45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1771.60611373472	7695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGAGGCTTTTTTG	1865	False	NA	30	True	AATAAA	-17	NA	75353847	75371297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_75353960_75355147_75355295_75368010_75368204_75371106
ENSMUSG00000020180.11_75353848_75371297_3	chr10	+	646	4	NNC	ENSMUSG00000020180.11	novel	3036	4	NA	NA	0	45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1721.43667389254	9711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGAGGCTTTTTTG	1865	False	NA	30	True	AATAAA	-17	NA	75353847	75371297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_75353960_75355156_75355295_75368010_75368204_75371094
ENSMUSG00000020182.17_11764101_11772690_1	chr11	-	994	5	NNC	ENSMUSG00000020182.17	novel	1922	15	NA	NA	231	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	40.5362492098122	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTGAGTAAGCGTCTT	NA	False	NA	-1	True	AATAAA	-21	NA	11772690	11764100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11772532
ENSMUSG00000020182.17_11764101_11779329_1	chr11	-	1084	6	ISM	ENSMUSG00000020182.17	ENSMUST00000109659.9	1954	15	61079	-2	-6408	0	3prime_fragment	FALSE	canonical	3	63	junction_5	20.3666393889615	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTGAGTAAGCGTCTT	NA	False	NA	-1	True	AATAAA	-21	NA	11779329	11764100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101
ENSMUSG00000020182.17_11764101_11823260_2	chr11	-	1569	12	ISM	ENSMUSG00000020182.17	ENSMUST00000109659.9	1954	15	17148	-2	7369	0	3prime_fragment	TRUE	canonical	3	45	junction_6	24.3211977738973	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTGAGTAAGCGTCTT	NA	False	NA	-1	True	AATAAA	-21	NA	11823260	11764100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133
ENSMUSG00000020182.17_11764101_11831442_1	chr11	-	1960	15	NNC	ENSMUSG00000020182.17	novel	1922	15	NA	NA	-813	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	27.3593807365173	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTGAGTAAGCGTCTT	4825	False	NA	-1	True	AATAAA	-21	NA	11831442	11764100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11831367
ENSMUSG00000020182.17_11764101_11832294_1	chr11	-	1928	15	NNC	ENSMUSG00000020182.17	novel	1922	15	NA	NA	-1665	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_14	27.1151174040743	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTGAGTAAGCGTCTT	3973	False	NA	-1	True	AATAAA	-21	NA	11832294	11764100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11832251
ENSMUSG00000020184.16_117524800_117546197_1	chr10	-	3136	11	ISM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	466	20	0	0	3prime_fragment	FALSE	canonical	3	473	junction_6	30.8506077735918	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGATTTGTCTTACACA	NA	False	NA	-19	True	AATAAA	-21	NA	117546197	117524799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850
ENSMUSG00000020184.16_117524800_117546619_1	chr10	-	2950	11	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_9	136.92187553492	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGATTTGTCTTACACA	NA	False	NA	-19	True	AATAAA	-21	NA	117546619	117524799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545850_117545934_117546456
ENSMUSG00000020184.16_117526014_117546619_1	chr10	-	1821	12	FSM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	44	1234	0	0	multi-exon	FALSE	canonical	3	316	junction_11	63.7658423031336	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTCCACATAAAATTCAC	NA	False	NA	NA	False	ATTAAA	-15	NA	117546619	117526013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
ENSMUSG00000020184.16_117526288_117546619_1	chr10	-	1547	12	FSM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	44	1508	0	-140	multi-exon	FALSE	canonical	3	316	junction_11	63.7658423031336	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAACCATGTGTGATCTGC	NA	False	NA	NA	False	NA	NA	NA	117546619	117526287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
ENSMUSG00000020185.17_110581329_110618252_1	chr10	+	2528	12	ISM	ENSMUSG00000020185.17	ENSMUST00000073781.12	5473	13	0	4993	0	-3119	5prime_fragment	TRUE	canonical	3	19	junction_6	7.27159082029863	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCATGAACTTCGGCTT	NA	False	NA	NA	False	NA	NA	NA	110581328	110618252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_110581541_110582192_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610502_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058
ENSMUSG00000020186.8_110756054_110775375_1	chr10	+	872	6	FSM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	404	108	0	0	multi-exon	FALSE	canonical	3	157	junction_1	20.350921355064	2470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCTTTCAGAGGAGCTG	NA	False	NA	31	True	AATAAA	-32	NA	110756053	110775375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597_110773728_110774497_110774592_110775071
ENSMUSG00000020186.8_110756054_110775488_1	chr10	+	985	6	FSM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	404	-5	0	5	multi-exon	FALSE	canonical	3	157	junction_1	20.350921355064	2541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATCAATTCCTTTATGC	NA	False	NA	NA	False	ATTAAA	-26	NA	110756053	110775488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597_110773728_110774497_110774592_110775071
ENSMUSG00000020196.11_75481946_75484055_1	chr10	-	968	3	ISM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	116095	0	19611	0	3prime_fragment	FALSE	canonical	3	114	junction_2	3	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCTTTGCTCATC	NA	False	NA	-4	True	AATAAA	-13	NA	75484055	75481945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_75482522_75482708_75482936_75483890
ENSMUSG00000020198.9_80542790_80548708_1	chr10	-	2065	11	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	29390	0	-2084	0	3prime_fragment	FALSE	canonical	3	294	junction_10	32.7720917855422	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTTGTGTCCCCAT	11	False	NA	-2	True	ATTAAA	-14	NA	80548708	80542789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598
ENSMUSG00000020211.16_80631933_80634074_1	chr10	+	896	6	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-2099	-4161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCCAGCGCCACAAAAGT	2253	False	NA	NA	False	NA	NA	NA	80631932	80634074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_80632357_80632424_80632511_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ENSMUSG00000020211.16_80631933_80634074_2	chr10	+	838	6	NIC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-2099	-4161	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCCAGCGCCACAAAAGT	2253	False	NA	NA	False	NA	NA	NA	80631932	80634074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_80632357_80632424_80632453_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ENSMUSG00000020211.16_80631933_80634074_3	chr10	+	739	4	NIC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-2099	-4161	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCCAGCGCCACAAAAGT	2253	False	NA	NA	False	NA	NA	NA	80631932	80634074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_80632357_80632424_80632489_80632565_80632657_80633914
ENSMUSG00000020211.16_80634566_80640758_1	chr10	+	1679	9	FSM	ENSMUSG00000020211.16	ENSMUST00000148665.8	2213	9	534	0	0	0	multi-exon	FALSE	canonical	3	1171	junction_7	118.037004261376	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4886	False	NA	29	True	ATTAAA	-17	NA	80634565	80640758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
ENSMUSG00000020219.8_80735500_80736626_1	chr10	-	832	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	177	216	-7	-216	multi-exon	FALSE	canonical	3	3643	junction_2	39.5	13974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTGCCCAGCACTT	5625	False	NA	-1	True	NA	NA	NA	80736626	80735499	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80736094_80736315_80736385_80736457
ENSMUSG00000020219.8_80735738_80736626_1	chr10	-	594	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	177	454	-7	0	multi-exon	FALSE	canonical	3	3643	junction_2	39.5	13507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCACCTCACTGCTTCA	5625	False	NA	-7	True	AATAAA	-25	NA	80736626	80735737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80736094_80736315_80736385_80736457
ENSMUSG00000020224.16_120062975_120067567_1	chr10	+	742	3	NNC	ENSMUSG00000020224.16	novel	1664	3	NA	NA	0	98	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	495	6963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTATGCTGAAGTTGT	NA	False	NA	7	True	AATAAA	-19	NA	120062974	120067567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_120063033_120063884_120064109_120067107
ENSMUSG00000020224.16_120062975_120067567_2	chr10	+	744	3	FSM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	0	920	0	98	multi-exon	FALSE	canonical	3	990	junction_2	137	7736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTATGCTGAAGTTGT	NA	False	NA	7	True	AATAAA	-19	NA	120062974	120067567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_120063029_120063878_120064109_120067107
ENSMUSG00000020224.16_120062975_120067976_1	chr10	+	1153	3	FSM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	0	511	0	0	multi-exon	FALSE	canonical	3	990	junction_2	137	8710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGGAGTTTGACATTT	NA	False	NA	8	True	AATAAA	-17	NA	120062974	120067976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_120063029_120063878_120064109_120067107
ENSMUSG00000020238.15_81322291_81332197_1	chr10	-	2950	13	NIC	ENSMUSG00000020238.15	novel	2841	14	NA	NA	-21	0	intron_retention	FALSE	canonical	3	345	junction_12	32.4987179234299	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCCAGGTGTCCTGAG	NA	False	NA	-30	True	AATAAA	-18	NA	81332197	81322290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ENSMUSG00000020246.14_82535045_82575312_1	chr10	+	2283	14	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	204	2950	0	-1917	5prime_fragment	FALSE	canonical	3	69	junction_7	9.81666256450355	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTATATGGATTCTTCCT	NA	False	NA	17	True	AATAAA	-26	NA	82535044	82575312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813
ENSMUSG00000020248.19_82585838_82599978_1	chr10	-	1251	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	0	1303	0	470	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAATGAAAGTTGCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	82599978	82585837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ENSMUSG00000020248.19_82586015_82599978_1	chr10	-	1074	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	0	1480	0	293	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAGTTTGTTGCTCTGTA	NA	False	NA	-6	True	ATTAAA	-17	NA	82599978	82586014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ENSMUSG00000020255.9_83196085_83202391_1	chr10	+	1201	4	FSM	ENSMUSG00000020255.9	ENSMUST00000020488.9	123179	4	0	121978	0	-121978	multi-exon	FALSE	canonical	3	119	junction_1	5.24933858267454	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGAATGCCTCCAGTTCT	NA	False	NA	2	True	NA	NA	NA	83196084	83202391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_83196238_83197910_83197998_83200242_83200380_83201567
ENSMUSG00000020255.9_83196085_83204699_1	chr10	+	3509	4	FSM	ENSMUSG00000020255.9	ENSMUST00000020488.9	123179	4	0	119670	0	-119670	multi-exon	FALSE	canonical	3	119	junction_1	5.24933858267454	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTATTTGGTGGCAC	NA	False	NA	17	True	TTTAAA	-6	NA	83196084	83204699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_83196238_83197910_83197998_83200242_83200380_83201567
ENSMUSG00000020257.14_106048409_106068338_1	chr9	+	3465	9	FSM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	282	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	24.1958157539687	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCATTGAGTTTCTGTA	NA	False	NA	54	True	NA	NA	NA	106048408	106068338	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ENSMUSG00000020265.17_77442059_77452544_1	chr10	+	881	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	128	1621	0	0	multi-exon	FALSE	canonical	3	1171	junction_3	110.14031454871	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGCTTTGTCAAACATA	NA	False	NA	5	True	ATTAAA	-20	NA	77442058	77452544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
ENSMUSG00000020265.17_77442059_77453256_1	chr10	+	1593	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	128	909	0	0	multi-exon	FALSE	canonical	3	1171	junction_3	110.14031454871	2861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGCCTATGTTAAAC	NA	False	NA	25	True	AGTAAA	-18	NA	77442058	77453256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
ENSMUSG00000020265.17_77442059_77453256_2	chr10	+	1602	4	FSM	ENSMUSG00000020265.17	ENSMUST00000129492.8	487	4	0	-1115	0	0	multi-exon	FALSE	canonical	3	43	junction_1	597.315661940987	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGCCTATGTTAAAC	NA	False	NA	25	True	AGTAAA	-18	NA	77442058	77453256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_77442185_77445645_77445775_77449813_77449886_77451981
ENSMUSG00000020265.17_77442059_77453256_3	chr10	+	1701	5	FSM	ENSMUSG00000020265.17	ENSMUST00000137841.9	1005	5	16	-712	0	0	multi-exon	FALSE	canonical	3	61	junction_3	668.550858200033	2324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGCCTATGTTAAAC	NA	False	NA	25	True	AGTAAA	-18	NA	77442058	77453256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451760_77451869_77451981
ENSMUSG00000020267.7_54757209_54761214_1	chr11	+	523	3	FSM	ENSMUSG00000020267.7	ENSMUST00000020504.6	636	3	0	113	0	81	multi-exon	FALSE	canonical	3	4351	junction_2	227.5	2345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCAAGCTCCAGTAAGAT	NA	False	NA	-79	True	GATAAA	-19	NA	54757208	54761214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_54757427_54760673_54760779_54761014
ENSMUSG00000020268.15_54730639_54751417_1	chr11	-	1015	6	NNC	ENSMUSG00000020268.15	novel	3431	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.8937593301544	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGAAGTGATTTCCTGT	NA	False	NA	-2	True	AATAAA	-27	NA	54751417	54730638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_54730753_54731393_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
ENSMUSG00000020272.9_32483305_32509746_1	chr11	+	612	3	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	0	-38782	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	15	91	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTAATTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	32483304	32509746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_32483560_32505123_32505289_32509554
ENSMUSG00000020277.11_77823740_77845580_1	chr10	-	2705	22	NNC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	-10	-959	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	260.293345766541	1402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGGTCACTGGGACAACA	NA	False	NA	-30	True	AATAAA	-15	NA	77845580	77823739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836671_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ENSMUSG00000020277.11_77823740_77845580_2	chr10	-	2710	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	61	959	-10	-959	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGGTCACTGGGACAACA	NA	False	NA	-30	True	AATAAA	-15	NA	77845580	77823739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ENSMUSG00000020277.11_77823740_77845580_3	chr10	-	2705	22	NNC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	-10	-959	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	260.619147677323	1402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGGTCACTGGGACAACA	NA	False	NA	-30	True	AATAAA	-15	NA	77845580	77823739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831199_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ENSMUSG00000020280.13_23616188_23682876_1	chr11	+	3378	18	FSM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	181	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	15.9356404539699	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616187	23682876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ENSMUSG00000020280.13_23616399_23682538_1	chr11	+	2829	18	FSM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	392	338	-112	-338	multi-exon	FALSE	canonical	3	91	junction_1	15.9356404539699	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATCAGCTAGTGCAAC	NA	False	NA	6	True	AATAAA	-19	NA	23616398	23682538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ENSMUSG00000020280.13_23616399_23682876_1	chr11	+	3167	18	FSM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	392	0	-112	0	multi-exon	FALSE	canonical	3	91	junction_1	15.9356404539699	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616398	23682876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ENSMUSG00000020283.6_23598822_23615869_1	chr11	-	1713	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	90	2343	-17	634	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	717	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCAGTGTTGAATTT	NA	False	NA	-3	True	AATAAA	-29	NA	23615869	23598821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
ENSMUSG00000020287.16_32176530_32182024_1	chr11	+	1021	4	NNC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	161.765948895997	1315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	27	True	AATAAA	-24	NA	32176529	32182024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_32176697_32177751_32177950_32179848_32180054_32181573
ENSMUSG00000020287.16_32182669_32217635_1	chr11	+	2087	13	NIC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	6130	34935	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCACCTCGGCCTCGGCGCT	NA	False	NA	NA	False	NA	NA	NA	32182668	32217635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ENSMUSG00000020289.16_32176530_32182024_1	chr11	-	1042	4	NIC	ENSMUSG00000020289.16	novel	3531	12	NA	NA	2377	-902	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACAGGCCAGGCCACCG	NA	False	NA	NA	False	NA	NA	NA	32182024	32176529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_32176718_32177751_32177950_32179848_32180054_32181573
ENSMUSG00000020289.16_32191661_32217635_1	chr11	-	999	7	ISM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	72	9698	-6	0	5prime_fragment	FALSE	canonical	3	159	junction_4	11.916375287813	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGCTCAGACATGACC	4639	False	NA	NA	False	AATAAA	-20	NA	32217635	32191660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ENSMUSG00000020290.15_23206041_23246233_3	chr11	+	3542	26	FSM	ENSMUSG00000020290.15	ENSMUST00000109551.8	4906	26	0	1364	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	458.823200808329	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGTGTTTTTTGTAT	NA	False	NA	12	True	ATTAAA	-21	NA	23206040	23246233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_23206163_23206645_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUSG00000020290.15_23206041_23246233_4	chr11	+	3544	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	573.647208657028	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGTGTTTTTTGTAT	NA	False	NA	12	True	ATTAAA	-21	NA	23206040	23246233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_23206155_23206639_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228329_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUSG00000020290.15_23206041_23246912_1	chr11	+	4221	26	FSM	ENSMUSG00000020290.15	ENSMUST00000109551.8	4906	26	0	685	0	679	multi-exon	FALSE	non_canonical	0	0	junction_1	458.823200808329	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCTTTTGAGATGACT	NA	False	NA	-91	True	NA	NA	NA	23206040	23246912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_23206163_23206645_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUSG00000020290.15_23206041_23247013_3	chr11	+	4322	26	FSM	ENSMUSG00000020290.15	ENSMUST00000109551.8	4906	26	0	584	0	-584	multi-exon	FALSE	non_canonical	0	0	junction_1	458.823200808329	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTCACTGACTTAA	NA	False	NA	10	True	AATAAA	-16	NA	23206040	23247013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_23206163_23206645_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUSG00000020303.3_31309439_31319904_1	chr11	-	1638	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	170	2132	143	-1453	multi-exon	FALSE	canonical	3	131	junction_2	14.613540144522	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTGGGTCACAAAAACCA	NA	False	NA	NA	False	AATAAA	-17	NA	31319904	31309438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
ENSMUSG00000020303.3_31310043_31320076_1	chr11	-	1206	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	-2	2736	-2	-2057	multi-exon	FALSE	canonical	3	131	junction_2	14.613540144522	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGCAAATTGTGGAC	NA	False	NA	-17	True	ATTAAA	-22	NA	31320076	31310042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
ENSMUSG00000020307.16_79518029_79524232_2	chr10	+	1099	6	NNC	ENSMUSG00000020307.16	novel	1266	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	763.990157004657	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGAGAATCACCTAGGA	NA	False	NA	21	True	AATAAA	-21	NA	79518028	79524232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79518060_79518226_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ENSMUSG00000020307.16_79518029_79524232_3	chr10	+	1100	6	NNC	ENSMUSG00000020307.16	novel	1266	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	763.990157004657	1017	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGAGAATCACCTAGGA	NA	False	NA	21	True	AATAAA	-21	NA	79518028	79524232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79518069_79518234_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ENSMUSG00000020307.16_79521064_79524232_1	chr10	+	688	2	ISM	ENSMUSG00000020307.16	ENSMUST00000166603.2	1078	6	2926	-4	227	0	3prime_fragment	FALSE	canonical	3	1645	junction_1	0	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGAGAATCACCTAGGA	NA	False	NA	21	True	AATAAA	-21	NA	79521063	79524232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_79521202_79523682
ENSMUSG00000020307.16_79521169_79524232_1	chr10	+	583	2	ISM	ENSMUSG00000020307.16	ENSMUST00000166603.2	1078	6	3031	-4	332	0	3prime_fragment	FALSE	canonical	3	1645	junction_1	0	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGAGAATCACCTAGGA	NA	False	NA	21	True	AATAAA	-21	NA	79521168	79524232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_79521202_79523682
ENSMUSG00000020308.8_79505717_79511961_1	chr10	+	897	2	FSM	ENSMUSG00000020308.8	ENSMUST00000219585.2	368	2	0	-529	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTGCTGGTCACCTG	8479	False	NA	11	True	AATAAA	-13	NA	79505716	79511961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79505886_79511233
ENSMUSG00000020309.7_30926707_30936350_1	chr11	-	1279	2	FSM	ENSMUSG00000020309.7	ENSMUST00000020553.5	1018	2	-16	-245	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTAAGTGTCATTTCT	NA	False	NA	NA	False	AATAAA	-33	NA	30936350	30926706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_30927747_30936111
ENSMUSG00000020321.17_21507242_21521815_1	chr11	-	1289	9	FSM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	119	550	119	-455	multi-exon	FALSE	canonical	3	1237	junction_4	96.8522553944925	5494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCAGACTCTGTTTCTA	NA	False	NA	-8	True	AATAAA	-19	NA	21521815	21507241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ENSMUSG00000020321.17_21507242_21521815_2	chr11	-	1289	9	NNC	ENSMUSG00000020321.17	novel	1958	9	NA	NA	119	-455	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	459.37675169734	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCAGACTCTGTTTCTA	NA	False	NA	-8	True	AATAAA	-19	NA	21521815	21507241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_21507569_21508461_21508546_21509185_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ENSMUSG00000020321.17_21507242_21521934_1	chr11	-	1408	9	FSM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	0	550	0	-455	multi-exon	FALSE	canonical	3	1237	junction_4	96.8522553944925	5577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCAGACTCTGTTTCTA	NA	False	NA	-8	True	AATAAA	-19	NA	21521934	21507241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ENSMUSG00000020326.8_40641575_40646138_1	chr11	-	1316	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	0	2196	0	-1658	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGTGAATTGTTGACT	NA	False	NA	87	True	TATAAA	-23	NA	40646138	40641574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ENSMUSG00000020326.8_40641667_40646138_1	chr11	-	1224	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	0	2288	0	-1750	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAAAATTTTCCAGTAT	NA	False	NA	-5	True	GATAAA	-21	NA	40646138	40641666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ENSMUSG00000020328.11_40624494_40630455_1	chr11	+	1159	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	0	418	0	78	multi-exon	FALSE	canonical	3	1122	junction_2	37.9326889224701	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTTTGTCTAAATATGC	NA	False	NA	26	True	AGTAAA	-20	NA	40624493	40630455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
ENSMUSG00000020328.11_40624494_40630873_1	chr11	+	1678	4	FSM	ENSMUSG00000020328.11	ENSMUST00000141839.2	577	4	-538	-563	0	0	multi-exon	FALSE	canonical	3	90	junction_1	492.487788906712	3697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	29	True	AATAAA	-21	NA	40624493	40630873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_40625083_40626844_40626894_40627319_40627472_40629985
ENSMUSG00000020328.11_40624494_40630873_2	chr11	+	1502	4	FSM	ENSMUSG00000020328.11	ENSMUST00000127382.2	727	4	-279	-496	0	0	multi-exon	FALSE	canonical	3	70	junction_2	523.696052644619	3083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	29	True	AATAAA	-21	NA	40624493	40630873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_40624982_40626844_40626894_40627394_40627472_40629985
ENSMUSG00000020328.11_40624773_40630873_1	chr11	+	1223	4	FSM	ENSMUSG00000020328.11	ENSMUST00000127382.2	727	4	0	-496	0	0	multi-exon	FALSE	canonical	3	70	junction_2	523.696052644619	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	29	True	AATAAA	-21	NA	40624772	40630873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_40624982_40626844_40626894_40627394_40627472_40629985
ENSMUSG00000020328.11_40624773_40630873_2	chr11	+	1298	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	279	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_2	37.9326889224701	1976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	29	True	AATAAA	-21	NA	40624772	40630873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
ENSMUSG00000020328.11_40625032_40630873_1	chr11	+	1140	4	FSM	ENSMUSG00000020328.11	ENSMUST00000141839.2	577	4	0	-563	0	0	multi-exon	FALSE	canonical	3	90	junction_1	492.487788906712	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	29	True	AATAAA	-21	NA	40625031	40630873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_40625083_40626844_40626894_40627319_40627472_40629985
ENSMUSG00000020333.18_54194624_54252365_1	chr11	+	2587	21	NIC	ENSMUSG00000020333.18	novel	5804	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	9.20584053739798	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGTACTTAATTATTT	NA	False	NA	9	True	ATTAAA	-23	NA	54194623	54252365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227896_54227975_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
ENSMUSG00000020340.17_46086898_46167717_1	chr11	-	3308	24	ISM	ENSMUSG00000020340.17	ENSMUST00000093166.11	6298	31	35404	2216	-6221	0	3prime_fragment	FALSE	canonical	3	87	junction_12	13.4680185487506	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGGCAGTGTGTGCTTT	NA	False	NA	NA	False	AATGAA	-18	NA	46167717	46086897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605
ENSMUSG00000020346.17_49136308_49153857_1	chr11	+	2597	2	ISM	ENSMUSG00000020346.17	ENSMUST00000081794.7	2976	3	1235	-3	250	0	3prime_fragment	FALSE	canonical	3	29	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGTGTGTCCTAGG	NA	False	NA	NA	False	AATAAA	-27	NA	49136307	49153857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_49136445_49151397
ENSMUSG00000020346.17_49136308_49153857_2	chr11	+	2722	3	FSM	ENSMUSG00000020346.17	ENSMUST00000156607.8	633	3	250	-2339	250	0	multi-exon	TRUE	canonical	3	30	junction_1	30.5	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGTGTGTCCTAGG	NA	False	NA	NA	False	AATAAA	-27	NA	49136307	49153857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_49136445_49142376_49142502_49151397
ENSMUSG00000020358.18_51475584_51494081_1	chr11	-	1881	13	NIC	ENSMUSG00000020358.18	novel	2370	7	NA	NA	3593	15343	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGGGTGGGGCTTCAG	NA	False	NA	NA	False	NA	NA	NA	51494081	51475583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_51475707_51476340_51476460_51477387_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
ENSMUSG00000020358.18_51491696_51497255_1	chr11	-	1403	7	ISM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	419	-305	419	0	3prime_fragment	FALSE	canonical	3	1798	junction_2	628.220414256723	2566	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGGTAAATGTGGGATG	NA	False	NA	-17	True	AATAAA	-22	NA	51497255	51491695	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166
ENSMUSG00000020359.14_51491696_51497255_1	chr11	+	1262	6	NIC	ENSMUSG00000020359.14	novel	829	2	NA	NA	1602	1939	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1882	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCGGCCGAGGCCGCGG	NA	False	NA	NA	False	NA	NA	NA	51491695	51497255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166
ENSMUSG00000020361.14_53152401_53190982_1	chr11	-	2556	19	FSM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	302	1760	256	1306	multi-exon	FALSE	canonical	3	1487	junction_13	205.703280251368	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAAGTTGTCAACTTTG	NA	False	NA	-44	True	ATTAAA	-16	NA	53190982	53152400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ENSMUSG00000020361.14_53152598_53190982_1	chr11	-	2359	19	FSM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	302	1957	256	1109	multi-exon	FALSE	canonical	3	1487	junction_13	205.703280251368	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTGGAACCCCCAAAGGA	NA	False	NA	NA	False	NA	NA	NA	53190982	53152597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ENSMUSG00000020368.16_50186601_50216500_1	chr11	-	2468	15	FSM	ENSMUSG00000020368.16	ENSMUST00000179865.8	4281	15	0	1813	0	425	multi-exon	FALSE	canonical	3	497	junction_14	977.081357713797	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGTTCAAGTGCAGTTAT	8136	False	NA	0	True	ATTAAA	-30	NA	50216500	50186600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202608_50216319
ENSMUSG00000020372.16_48691187_48696920_1	chr11	+	1095	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2301.09798104456	14691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATATGTGAGTCCTGGA	NA	False	NA	28	True	AATAAA	-20	NA	48691186	48696920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_48691400_48692489_48692666_48693114_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUSG00000020372.16_48691187_48696920_2	chr11	+	1101	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2301.09798104456	63072	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATATGTGAGTCCTGGA	NA	False	NA	28	True	AATAAA	-20	NA	48691186	48696920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_48691400_48692489_48692657_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUSG00000020372.16_48691187_48696920_3	chr11	+	207	3	NNC	ENSMUSG00000020372.16	novel	322	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2716.5	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATATGTGAGTCCTGGA	NA	False	NA	28	True	AATAAA	-20	NA	48691186	48696920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_48691247_48696449_48696483_48696806
ENSMUSG00000020372.16_48691187_48696920_4	chr11	+	1100	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2547.14657479097	52218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATATGTGAGTCCTGGA	NA	False	NA	28	True	AATAAA	-20	NA	48691186	48696920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_48691400_48692489_48692662_48693099_48693242_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUSG00000020372.16_48691187_48696920_5	chr11	+	1105	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	99	junction_5	2507.80021500265	63656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATATGTGAGTCCTGGA	NA	False	NA	28	True	AATAAA	-20	NA	48691186	48696920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694804_48694991_48695124_48696371_48696483_48696806
ENSMUSG00000020372.16_48691187_48696920_6	chr11	+	212	2	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATATGTGAGTCCTGGA	NA	False	NA	28	True	AATAAA	-20	NA	48691186	48696920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_48691283_48696804
ENSMUSG00000020372.16_48691187_48696920_7	chr11	+	1104	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2937.33352632927	35662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATATGTGAGTCCTGGA	NA	False	NA	28	True	AATAAA	-20	NA	48691186	48696920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_48691400_48692494_48692666_48693100_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUSG00000020372.16_48691187_48697065_1	chr11	+	1251	8	FSM	ENSMUSG00000020372.16	ENSMUST00000020640.8	1447	8	0	196	0	145	multi-exon	FALSE	canonical	1	1907	junction_2	1651.73542626153	106614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTTGGTCTCCTGGAT	NA	False	NA	NA	False	NA	NA	NA	48691186	48697065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUSG00000020376.18_49962121_49995580_1	chr11	+	884	7	ISM	ENSMUSG00000020376.18	ENSMUST00000102776.5	1502	9	45946	0	-22380	0	3prime_fragment	FALSE	canonical	3	193	junction_6	46.6821402917885	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCGCCAGCGTGTGTTT	NA	False	NA	24	True	NA	NA	NA	49962120	49995580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49990072_49990167_49995375
ENSMUSG00000020385.17_51154013_51172591_2	chr11	+	1786	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	35.3321898042513	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGTGATTGAGTATT	NA	False	NA	13	True	AGTAAA	-13	NA	51154012	51172591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_51154097_51157997_51158159_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ENSMUSG00000020385.17_51154013_51172591_3	chr11	+	1936	14	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_4	49.8634822681421	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGTGATTGAGTATT	NA	False	NA	13	True	AGTAAA	-13	NA	51154012	51172591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ENSMUSG00000020386.6_51654521_51682753_1	chr11	+	1194	7	NNC	ENSMUSG00000020386.6	novel	1201	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	279.793773260871	2686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTGGGCAGCTGTT	3572	False	NA	13	True	AATAAA	-19	NA	51654520	51682753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673671_51678983_51679081_51680023_51680156_51682153
ENSMUSG00000020386.6_51654521_51682753_2	chr11	+	1271	8	NNC	ENSMUSG00000020386.6	novel	1201	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	338.166786527305	2675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTGGGCAGCTGTT	3572	False	NA	13	True	AATAAA	-19	NA	51654520	51682753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_51654619_51668313_51668389_51670058_51670135_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
ENSMUSG00000020386.6_51654521_51682753_3	chr11	+	1188	7	NNC	ENSMUSG00000020386.6	novel	1201	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	279.793773260871	2685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTGGGCAGCTGTT	3572	False	NA	13	True	AATAAA	-19	NA	51654520	51682753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673665_51678983_51679081_51680023_51680156_51682153
ENSMUSG00000020390.13_51876324_51891188_1	chr11	-	1669	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	123	0	118	0	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	1826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCAGCCTCCTAGAGA	NA	False	NA	58	True	NA	NA	NA	51891188	51876323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
ENSMUSG00000020390.13_51876324_51891590_1	chr11	-	1756	7	FSM	ENSMUSG00000020390.13	ENSMUST00000109086.8	585	7	-1	-1170	-1	0	multi-exon	FALSE	canonical	3	81	junction_6	225.904662782039	2060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCAGCCTCCTAGAGA	NA	False	NA	58	True	NA	NA	NA	51891590	51876323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119_51891189_51891503
ENSMUSG00000020390.13_51877085_51891188_1	chr11	-	908	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	123	761	118	409	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTTTGTCACTTATTTC	NA	False	NA	-1	True	AATACA	-15	NA	51891188	51877084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
ENSMUSG00000020390.13_51877085_51891590_1	chr11	-	995	7	FSM	ENSMUSG00000020390.13	ENSMUST00000109086.8	585	7	-1	-409	-1	409	multi-exon	FALSE	canonical	3	81	junction_6	225.904662782039	1635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTTTGTCACTTATTTC	NA	False	NA	-1	True	AATACA	-15	NA	51891590	51877084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119_51891189_51891503
ENSMUSG00000020390.13_51877211_51891188_1	chr11	-	782	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	123	887	118	283	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTCAAATATTGAATG	NA	False	NA	-30	True	AATATA	-20	NA	51891188	51877210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
ENSMUSG00000020390.13_51877211_51891590_1	chr11	-	869	7	FSM	ENSMUSG00000020390.13	ENSMUST00000109086.8	585	7	-1	-283	-1	283	multi-exon	FALSE	canonical	3	81	junction_6	225.904662782039	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTCAAATATTGAATG	NA	False	NA	-30	True	AATATA	-20	NA	51891590	51877210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119_51891189_51891503
ENSMUSG00000020392.9_51860966_51868161_1	chr11	+	1540	2	ISM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	2478	0	2247	0	3prime_fragment	FALSE	canonical	3	1106	junction_1	0	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAGGTTCAAGTTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	51860965	51868161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_51861071_51866726
ENSMUSG00000020396.9_4888754_4897131_1	chr11	-	3061	4	FSM	ENSMUSG00000020396.9	ENSMUST00000093369.5	3994	4	933	0	933	0	multi-exon	FALSE	canonical	3	23	junction_2	3.09120616516523	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTTGTTTTTACTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	4897131	4888753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_4891416_4893850_4893976_4895110_4895311_4897057
ENSMUSG00000020397.16_46327788_46332356_1	chr11	+	1296	3	NNC	ENSMUSG00000020397.16	novel	2547	3	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	268	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATTGTCATTCTTGGAAA	NA	False	NA	14	True	AATAAA	-16	NA	46327787	46332356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_46328019_46330704_46330803_46331389
ENSMUSG00000020397.16_46327788_46332356_2	chr11	+	1368	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	-13	1192	0	2	multi-exon	FALSE	canonical	3	262	junction_1	137	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATTGTCATTCTTGGAAA	NA	False	NA	14	True	AATAAA	-16	NA	46327787	46332356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_46328019_46330632_46330803_46331389
ENSMUSG00000020397.16_46327788_46332356_3	chr11	+	1016	2	FSM	ENSMUSG00000020397.16	ENSMUST00000152119.2	381	2	36	-671	0	2	multi-exon	FALSE	canonical	3	22	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATTGTCATTCTTGGAAA	NA	False	NA	14	True	AATAAA	-16	NA	46327787	46332356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_46327837_46331389
ENSMUSG00000020400.18_54801613_54846883_1	chr11	-	2521	17	NIC	ENSMUSG00000020400.18	novel	2973	19	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_16	54.30350903717	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3647	False	NA	-5	True	CATAAA	-18	NA	54846883	54801612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846846
ENSMUSG00000020400.18_54801613_54846948_1	chr11	-	2660	17	NIC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_16	64.3996312101242	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3582	False	NA	-5	True	CATAAA	-18	NA	54846948	54801612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846846
ENSMUSG00000020402.12_52251962_52280224_1	chr11	+	1747	9	FSM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	275	0	0	0	multi-exon	FALSE	canonical	3	3003	junction_1	192.557742962988	22125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTGTTTTTGTTA	5406	False	NA	30	True	AATAAA	-26	NA	52251961	52280224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
ENSMUSG00000020407.14_9068548_9086168_1	chr11	+	1206	9	NIC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	927.674301344497	9895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGACTCTGCGGTA	NA	False	NA	24	True	AATAAA	-18	NA	9068547	9086168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081783_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ENSMUSG00000020407.14_9068627_9086168_1	chr11	+	1127	9	NNC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	934.618697317254	9168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGACTCTGCGGTA	NA	False	NA	24	True	AATAAA	-18	NA	9068626	9086168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079600_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ENSMUSG00000020409.11_43324586_43337138_1	chr11	+	2087	17	NNC	ENSMUSG00000020409.11	novel	3625	16	NA	NA	0	926	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	73.1481533857827	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTCTCAACAGTCAAGAA	NA	False	NA	14	True	AATAAA	-19	NA	43324585	43337138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_43324647_43327180_43327313_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ENSMUSG00000020412.17_4587747_4601423_1	chr11	+	749	6	NNC	ENSMUSG00000020412.17	novel	4844	19	NA	NA	0	-31962	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_5	127.679912280672	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTAGATATTTATGAATT	NA	False	NA	NA	False	AATAAA	-27	NA	4587746	4601423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4601308
ENSMUSG00000020412.17_4587747_4607748_1	chr11	+	940	7	NNC	ENSMUSG00000020412.17	novel	4844	19	NA	NA	0	-25637	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_6	120.00370364655	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACCGAAGGTGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	4587746	4607748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607510
ENSMUSG00000020413.12_8946609_8961160_1	chr11	-	1137	8	FSM	ENSMUSG00000020413.12	ENSMUST00000020683.10	4640	8	31	3472	0	731	multi-exon	FALSE	canonical	3	104	junction_5	37.6557988054094	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTGTTTTGTTTTC	NA	False	NA	NA	False	AAGAAA	-20	NA	8961160	8946608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240_8960418_8960496_8960625_8961058
ENSMUSG00000020415.17_43311096_43316513_1	chr11	-	755	5	NIC	ENSMUSG00000020415.17	novel	700	6	NA	NA	277	0	combination_of_known_junctions	FALSE	canonical	3	326	junction_1	4118.28200679604	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGATTGTGAATACTTA	NA	False	NA	-31	True	AATAAA	-15	NA	43316513	43311095	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_43311236_43311854_43312093_43313719_43313814_43315545_43315725_43316409
ENSMUSG00000020419.12_4295814_4391086_1	chr11	-	1916	11	FSM	ENSMUSG00000020419.12	ENSMUST00000109949.8	1343	11	-4	-569	-4	0	multi-exon	FALSE	canonical	3	44	junction_4	69.004347689113	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTTGATAATTTATGT	NA	False	NA	-20	True	AATAAA	-11	NA	4391086	4295813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4371610_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ENSMUSG00000020419.12_4374248_4391169_2	chr11	-	507	6	NNC	ENSMUSG00000020419.12	novel	583	5	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_5	60.0066662963374	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAATTAAAGACTCATCT	NA	False	NA	NA	False	NA	NA	NA	4391169	4374247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876_4390941_4391080
ENSMUSG00000020419.12_4374248_4391169_3	chr11	-	508	5	NIC	ENSMUSG00000020419.12	novel	583	5	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	77.2572812102523	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAATTAAAGACTCATCT	NA	False	NA	NA	False	NA	NA	NA	4391169	4374247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4391015
ENSMUSG00000020424.4_4168225_4172409_1	chr11	+	1547	10	NNC	ENSMUSG00000020424.4	novel	1574	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	54.6479190978796	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGACAGCTGGCG	7118	False	NA	17	True	AATAAA	-25	NA	4168224	4172409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_4168453_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842_4172019_4172071
ENSMUSG00000020430.13_3914009_3919487_1	chr11	+	187	3	ISM	ENSMUSG00000020430.13	ENSMUST00000130973.8	497	4	0	1348	0	-1348	5prime_fragment	FALSE	canonical	3	1202	junction_2	31	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACAAGGGTTCCACAGC	NA	False	NA	NA	False	AAGAAA	-1	NA	3914008	3919487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_3914061_3918262_3918343_3919432
ENSMUSG00000020430.13_3914009_3929221_1	chr11	+	2085	15	NNC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	0	-783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	301.394717123914	1781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTCTGTGTTCAGAAG	NA	False	NA	25	True	NA	NA	NA	3914008	3929221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927879_3928033_3928826
ENSMUSG00000020430.13_3914009_3929221_2	chr11	+	2087	15	NNC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	0	-783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	301.370610541173	1769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTCTGTGTTCAGAAG	NA	False	NA	25	True	NA	NA	NA	3914008	3929221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925746_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUSG00000020430.13_3914009_3929221_3	chr11	+	2083	15	NNC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	0	-783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	298.965938951348	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTCTGTGTTCAGAAG	NA	False	NA	25	True	NA	NA	NA	3914008	3929221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920724_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUSG00000020430.13_3914009_3929221_4	chr11	+	1649	12	NNC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	0	-783	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	314.799004482448	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTCTGTGTTCAGAAG	NA	False	NA	25	True	NA	NA	NA	3914008	3929221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_3914029_3923265_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUSG00000020430.13_3914009_3929221_5	chr11	+	2085	15	NNC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	0	-783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	300.111994401546	1014	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTCTGTGTTCAGAAG	NA	False	NA	25	True	NA	NA	NA	3914008	3929221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928835
ENSMUSG00000020432.13_3867192_3882044_1	chr11	-	1855	10	NNC	ENSMUSG00000020432.13	novel	1949	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	46.5015597773709	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3882044	3867191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881531_3882012
ENSMUSG00000020432.13_3867192_3882044_2	chr11	-	1892	10	NNC	ENSMUSG00000020432.13	novel	1949	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_9	43.1225643434566	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3882044	3867191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881531_3881975
ENSMUSG00000020440.14_28423589_28426601_1	chr6	+	459	2	NNC	ENSMUSG00000020440.14	novel	1116	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGTGTTGTCTGTTGCCT	-1	True	NA	17	True	AATAAA	-17	NA	28423588	28426601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_28423618_28426171
ENSMUSG00000020440.14_28423708_28426601_1	chr6	+	967	6	FSM	ENSMUSG00000020440.14	ENSMUST00000020717.12	1116	6	149	0	0	0	multi-exon	FALSE	canonical	3	1725	junction_4	143.712769091685	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGTGTTGTCTGTTGCCT	118	False	NA	17	True	AATAAA	-17	NA	28423707	28426601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_28423755_28424288_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
ENSMUSG00000020444.20_59074701_59082638_1	chr11	-	1028	8	NNC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	288.41530430111	1867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGTCACAGCCCTCC	1610	False	NA	-20	True	AATAAA	-13	NA	59082638	59074700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082486
ENSMUSG00000020444.20_59074701_59082638_2	chr11	-	929	8	NNC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	285.042710727315	1612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGTCACAGCCCTCC	1610	False	NA	-20	True	AATAAA	-13	NA	59082638	59074700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_59075005_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
ENSMUSG00000020444.20_59074701_59082638_3	chr11	-	938	8	FSM	ENSMUSG00000020444.20	ENSMUST00000170202.9	1078	8	140	0	0	0	multi-exon	FALSE	canonical	3	619	junction_7	90.3745042609262	2043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGTCACAGCCCTCC	1610	False	NA	-20	True	AATAAA	-13	NA	59082638	59074700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
ENSMUSG00000020444.20_59074701_59082778_1	chr11	-	901	8	NNC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	290.128261572818	709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGTCACAGCCCTCC	1470	False	NA	-20	True	AATAAA	-13	NA	59082778	59074700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082753
ENSMUSG00000020448.17_3365982_3402334_2	chr11	-	2739	6	NIC	ENSMUSG00000020448.17	novel	2787	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	55.8161267018771	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGAGTGTGGAGCTTGTG	6844	False	NA	-5	True	ATTAAA	-14	NA	3402334	3365981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3382399_3382621_3402208
ENSMUSG00000020451.18_3294456_3321343_1	chr11	-	3460	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	33	200	-8	-200	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGGCCACTTTTCTTG	9847	False	NA	-16	True	AATGAA	-15	NA	3321343	3294455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ENSMUSG00000020451.18_3295477_3321343_1	chr11	-	2439	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	33	1221	-8	-1221	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGAGTCTGTTACTCG	9847	False	NA	-22	True	GATAAA	-16	NA	3321343	3295476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ENSMUSG00000020451.18_3307579_3321343_1	chr11	-	1341	4	ISM	ENSMUSG00000020451.18	ENSMUST00000101640.10	3711	16	33	13323	-8	673	5prime_fragment	FALSE	canonical	3	120	junction_3	71.1243043316887	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGCCCCACTTAAATGTT	9847	False	NA	NA	False	NA	NA	NA	3321343	3307578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_3308299_3308994_3309105_3310450_3310587_3320968
ENSMUSG00000020453.18_3243181_3245429_1	chr11	+	1137	2	ISM	ENSMUSG00000020453.18	ENSMUST00000136285.2	652	3	313	-534	313	0	3prime_fragment	FALSE	canonical	3	69	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	9194	False	NA	NA	False	GATAAA	-17	NA	3243180	3245429	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_3243344_3244455
ENSMUSG00000020455.17_58868942_58882284_1	chr11	+	2255	5	NNC	ENSMUSG00000020455.17	novel	2251	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.6525267016199	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	1689	False	NA	15	True	AATAAA	-15	NA	58868941	58882284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_58869471_58872066_58872163_58872818_58873050_58879628_58879756_58881012
ENSMUSG00000020456.18_6241633_6306642_1	chr11	+	4115	23	NIC	ENSMUSG00000020456.18	novel	4075	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_4	180.942853176638	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241632	6306642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUSG00000020457.14_3199907_3216392_1	chr11	-	1377	8	NIC	ENSMUSG00000020457.14	novel	1546	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	666.583705722465	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGAGGTTTGCTGTG	NA	False	NA	-1	True	TATAAA	-34	NA	3216392	3199906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_3200366_3202159_3202283_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ENSMUSG00000020457.14_3199907_3216392_2	chr11	-	955	8	NNC	ENSMUSG00000020457.14	novel	1546	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	682.240785790412	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGAGGTTTGCTGTG	NA	False	NA	-1	True	TATAAA	-34	NA	3216392	3199906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_3200024_3202768_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ENSMUSG00000020457.14_3199907_3216392_3	chr11	-	1540	9	NNC	ENSMUSG00000020457.14	novel	1546	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	649.961345004455	4717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGAGGTTTGCTGTG	NA	False	NA	-1	True	TATAAA	-34	NA	3216392	3199906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204634_3206538_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ENSMUSG00000020457.14_3199907_3216392_4	chr11	-	1537	9	NNC	ENSMUSG00000020457.14	novel	1546	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	643.913122536729	4768	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGAGGTTTGCTGTG	NA	False	NA	-1	True	TATAAA	-34	NA	3216392	3199906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_3200366_3202159_3202283_3202651_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ENSMUSG00000020457.14_3200097_3216392_1	chr11	-	1355	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	1	190	0	0	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGGCTGGCTTTGAAC	NA	False	NA	NA	False	NA	NA	NA	3216392	3200096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ENSMUSG00000020459.15_29476457_29495452_1	chr11	+	2740	15	NIC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	0	173	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	61.3790913678498	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATATTTTCCCTTCA	NA	False	NA	6	True	NA	NA	NA	29476456	29495452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_29476488_29476692_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ENSMUSG00000020459.15_29476457_29495452_2	chr11	+	2833	13	NIC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	0	173	intron_retention	FALSE	canonical	3	11	junction_2	65.9917924189567	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATATTTTCCCTTCA	NA	False	NA	6	True	NA	NA	NA	29476456	29495452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_29476844_29479928_29480155_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ENSMUSG00000020459.15_29476457_29495452_3	chr11	+	2589	14	FSM	ENSMUSG00000020459.15	ENSMUST00000020749.13	2425	14	9	-173	0	173	multi-exon	FALSE	canonical	3	41	junction_1	55.902387454177	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATATTTTCCCTTCA	NA	False	NA	6	True	NA	NA	NA	29476456	29495452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_29476488_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ENSMUSG00000020459.15_29476457_29495452_4	chr11	+	2945	14	FSM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	0	-204	0	173	multi-exon	FALSE	canonical	3	166	junction_5	30.3862706462472	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATATTTTCCCTTCA	NA	False	NA	6	True	NA	NA	NA	29476456	29495452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ENSMUSG00000020459.15_29476457_29495452_5	chr11	+	2667	14	NIC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	0	173	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	63.202408013447	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATATTTTCCCTTCA	NA	False	NA	6	True	NA	NA	NA	29476456	29495452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_29476566_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ENSMUSG00000020460.16_29495846_29497905_1	chr11	-	587	6	FSM	ENSMUSG00000020460.16	ENSMUST00000102845.11	791	6	204	0	-14	0	multi-exon	FALSE	canonical	0	0	junction_3	5362.30439270282	207400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29497905	29495845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497746_29497840
ENSMUSG00000020461.11_29495846_29498109_4	chr11	+	789	6	NNC	ENSMUSG00000020461.11	novel	2200	12	NA	NA	-2104	-30095	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	205745	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGGGGCTTGTGAAAC	NA	False	NA	NA	False	NA	NA	NA	29495845	29498109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497740_29497836
ENSMUSG00000020464.16_29080748_29111680_1	chr11	+	2552	27	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	168.157277042908	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTTTTATATCTTAGGA	NA	False	NA	8	True	AATAAA	-20	NA	29080747	29111680	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095526_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103343_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ENSMUSG00000020464.16_29080748_29111680_2	chr11	+	2536	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_19	159.252962838496	961	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTTTTATATCTTAGGA	NA	False	NA	8	True	AATAAA	-20	NA	29080747	29111680	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103258_29103343_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ENSMUSG00000020464.16_29080748_29112472_3	chr11	+	3351	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	0	-644	0	644	multi-exon	FALSE	canonical	0	0	junction_19	125.489275633577	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTAAGGTATGTTTAT	NA	False	NA	NA	False	TTTAAA	-22	NA	29080747	29112472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ENSMUSG00000020469.9_5846637_5847925_1	chr11	-	367	4	ISM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	857	0	857	0	3prime_fragment	FALSE	canonical	3	77	junction_3	8.80656320908194	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTGTTGGCTTGACTG	NA	False	NA	2	True	AATAAA	-20	NA	5847925	5846636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_5846782_5847125_5847175_5847319_5847399_5847831
ENSMUSG00000020469.9_5846637_5848027_1	chr11	-	469	4	ISM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	755	0	755	0	3prime_fragment	FALSE	canonical	3	77	junction_3	8.80656320908194	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTGTTGGCTTGACTG	NA	False	NA	2	True	AATAAA	-20	NA	5848027	5846636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_5846782_5847125_5847175_5847319_5847399_5847831
ENSMUSG00000020469.9_5846637_5848782_1	chr11	-	811	6	ISM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	0	0	0	0	intron_retention	FALSE	canonical	3	38	junction_4	23.9115035077261	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTGTTGGCTTGACTG	NA	False	NA	2	True	AATAAA	-20	NA	5848782	5846636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_5846782_5847125_5847175_5847319_5847399_5847831_5847937_5848159_5848236_5848425
ENSMUSG00000020472.15_59376346_59397046_1	chr11	-	3640	10	FSM	ENSMUSG00000020472.15	ENSMUST00000013262.15	4064	10	424	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	26.5236907846458	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTCTATCCTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	59397046	59376345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653_59396789_59396989
ENSMUSG00000020476.15_5738488_5750458_1	chr11	+	1830	13	FSM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	0	171	0	170	multi-exon	FALSE	canonical	3	305	junction_7	40.5239126936183	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGACTAGCCCGTGAGTT	NA	False	NA	29	True	NA	NA	NA	5738487	5750458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ENSMUSG00000020477.11_5654171_5657670_1	chr11	-	790	4	FSM	ENSMUSG00000020477.11	ENSMUST00000154330.2	995	4	17	188	-3	155	multi-exon	FALSE	canonical	3	1753	junction_3	448.803099612984	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCTCTTGGTCTC	NA	False	NA	0	True	NA	NA	NA	5657670	5654170	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_5654733_5657297_5657410_5657486_5657556_5657623
ENSMUSG00000020477.11_5654326_5657670_1	chr11	-	614	4	NNC	ENSMUSG00000020477.11	novel	995	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_3	1216.61890317205	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCTGGGTCTCTCTCTC	NA	False	NA	-25	True	AATAAA	-18	NA	5657670	5654325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_5654733_5657297_5657410_5657486_5657556_5657644
ENSMUSG00000020477.11_5654326_5657670_2	chr11	-	635	4	FSM	ENSMUSG00000020477.11	ENSMUST00000154330.2	995	4	17	343	-3	0	multi-exon	FALSE	canonical	3	1753	junction_3	448.803099612984	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCTGGGTCTCTCTCTC	NA	False	NA	-25	True	AATAAA	-18	NA	5657670	5654325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_5654733_5657297_5657410_5657486_5657556_5657623
ENSMUSG00000020483.15_87872089_87878359_1	chr11	-	501	3	NNC	ENSMUSG00000020483.15	novel	2476	3	NA	NA	0	-1108	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	300	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTAGTTGCCTGGG	NA	False	NA	-24	True	AGTAAA	-16	NA	87878359	87872088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_87872397_87874697_87874837_87878305
ENSMUSG00000020483.15_87872089_87922650_1	chr11	-	697	3	NNC	ENSMUSG00000020483.15	novel	2443	3	NA	NA	-44291	-1108	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_2	289.5	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTAGTTGCCTGGG	NA	False	NA	-24	True	AGTAAA	-16	NA	87922650	87872088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_87872397_87874697_87874837_87922400
ENSMUSG00000020484.20_5470995_5475893_1	chr11	+	1793	5	FSM	ENSMUSG00000020484.20	ENSMUST00000063084.16	2129	5	336	0	0	0	multi-exon	FALSE	canonical	3	876	junction_4	35.2801289680182	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTTCTGTGATTTCTA	NA	False	NA	34	True	ATTAAA	-17	NA	5470994	5475893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238_5474385_5474684
ENSMUSG00000020492.12_87000077_87013036_1	chr11	+	595	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	17	2425	0	103	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCAGCATTCATTTTAGG	NA	False	NA	5	True	AATAAA	-17	NA	87000076	87013036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
ENSMUSG00000020492.12_87000077_87013514_1	chr11	+	1073	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	17	1947	0	581	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTTTTTTCTTTAATG	NA	False	NA	NA	False	NA	NA	NA	87000076	87013514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
ENSMUSG00000020492.12_87000077_87013690_1	chr11	+	1249	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	17	1771	0	757	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTTTAGACTTTCTAT	NA	False	NA	5	True	AATAAA	-23	NA	87000076	87013690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
ENSMUSG00000020493.9_86982559_86999603_1	chr11	-	1313	10	FSM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	-69	2580	-69	-2580	multi-exon	FALSE	canonical	3	68	junction_6	5.79484658240235	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACTAAAATATGTGTAAC	NA	False	NA	NA	False	AATGAA	-23	NA	86999603	86982558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
ENSMUSG00000020496.11_58823114_58829243_1	chr11	-	1450	4	FSM	ENSMUSG00000020496.11	ENSMUST00000094151.6	1949	4	499	0	499	0	multi-exon	TRUE	canonical	3	1063	junction_2	80.5495016882303	409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTTCCATACCTCCT	NA	False	NA	-16	True	AATAAA	-17	NA	58829243	58823113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_58824223_58824832_58825058_58827965_58828059_58829220
ENSMUSG00000020514.9_58062487_58070392_1	chr11	+	718	7	NNC	ENSMUSG00000020514.9	novel	722	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	492.788578736697	5305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTCATTGAATTATTG	1481	False	NA	13	True	AGTAAA	-16	NA	58062486	58070392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_58062540_58062619_58062669_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070108
ENSMUSG00000020514.9_58062487_58070392_2	chr11	+	902	7	NIC	ENSMUSG00000020514.9	novel	722	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	483.207138698187	5356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTCATTGAATTATTG	1481	False	NA	13	True	AGTAAA	-16	NA	58062486	58070392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_58062540_58062619_58062848_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
ENSMUSG00000020515.14_57994802_58008673_1	chr11	+	1465	7	FSM	ENSMUSG00000020515.14	ENSMUST00000020822.12	2035	7	-177	747	-177	589	multi-exon	FALSE	canonical	3	691	junction_3	50.6603614497787	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTCATTCTTCTTCT	NA	False	NA	16	True	AGTAAA	-17	NA	57994801	58008673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ENSMUSG00000020515.14_57994802_58008673_2	chr11	+	1280	7	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-177	589	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	278.973963341066	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTCATTCTTCTTCT	NA	False	NA	16	True	AGTAAA	-17	NA	57994801	58008673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_57994850_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ENSMUSG00000020515.14_57994802_58009420_1	chr11	+	2027	7	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-177	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	278.973963341066	1088	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGAAGTGTGGTCTTTG	NA	False	NA	14	True	AATAAA	-19	NA	57994801	58009420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_57994850_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ENSMUSG00000020521.8_86375511_86387370_1	chr11	+	1943	9	FSM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	28	2481	0	-2481	multi-exon	TRUE	canonical	3	265	junction_2	21.9146070008111	628	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGGTGGACCTGTTA	NA	False	NA	3	True	AATAAA	-14	NA	86375510	86387370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_86375626_86376886_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
ENSMUSG00000020523.15_57373819_57409443_1	chr11	-	2450	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	45	junction_12	132.513346430646	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCGTGGTATTTAATAGC	NA	False	NA	NA	False	AATAAA	-21	NA	57409443	57373818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57405030_57405118_57409398
ENSMUSG00000020523.15_57373819_57409443_2	chr11	-	2578	14	FSM	ENSMUSG00000020523.15	ENSMUST00000108850.2	1765	14	-14	-799	0	0	multi-exon	FALSE	canonical	3	22	junction_12	166.027587356179	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCGTGGTATTTAATAGC	NA	False	NA	NA	False	AATAAA	-21	NA	57409443	57373818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404899_57405115_57409398
ENSMUSG00000020523.15_57374618_57409443_1	chr11	-	1758	14	FSM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	0	799	0	0	multi-exon	FALSE	canonical	3	63	junction_13	118.75144346678	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	57409443	57374617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57409398
ENSMUSG00000020523.15_57399866_57409443_1	chr11	-	716	6	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	0	-1665	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	205.034045953349	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTTGTAACTTCATCT	NA	False	NA	NA	False	NA	NA	NA	57409443	57399865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_57400058_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
ENSMUSG00000020523.15_57399866_57409443_2	chr11	-	859	5	ISM	ENSMUSG00000020523.15	ENSMUST00000130596.2	759	6	-15	1665	0	-1665	5prime_fragment	FALSE	canonical	3	63	junction_4	198.735219576199	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTTGTAACTTCATCT	NA	False	NA	NA	False	NA	NA	NA	57409443	57399865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57409398
ENSMUSG00000020526.13_84771136_84801948_1	chr11	-	3825	25	NIC	ENSMUSG00000020526.13	novel	998	5	NA	NA	5183	30640	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCGGGGCGTGCACACG	NA	False	NA	NA	False	NA	NA	NA	84801948	84771135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ENSMUSG00000020526.13_84801776_84807175_1	chr11	-	976	5	NNC	ENSMUSG00000020526.13	novel	998	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_3	149.989999666644	1604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTTCCCTTAGTAAAC	NA	False	NA	69	True	AATAAA	-16	NA	84807175	84801775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_84802475_84804047_84804129_84805036_84805107_84806924_84806957_84807081
ENSMUSG00000020526.13_84801776_84807175_2	chr11	-	963	4	NNC	ENSMUSG00000020526.13	novel	998	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	172.111075245674	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTTCCCTTAGTAAAC	NA	False	NA	69	True	AATAAA	-16	NA	84807175	84801775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_84802475_84804047_84804129_84805036_84805112_84807067
ENSMUSG00000020526.13_84801958_84807175_1	chr11	-	799	5	FSM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	17	182	0	159	multi-exon	FALSE	canonical	3	360	junction_2	22.0609949911603	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGCTATTTATATTTAG	NA	False	NA	-113	True	NA	NA	NA	84807175	84801957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_84802475_84804047_84804129_84805036_84805112_84806924_84806957_84807081
ENSMUSG00000020528.15_61620476_61652866_1	chr11	-	1670	10	NIC	ENSMUSG00000020528.15	novel	1771	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	77.5972508104078	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGGATAGTTGTTCT	264	False	NA	-3	True	AATAAA	-26	NA	61652866	61620475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61647020_61647172_61652779
ENSMUSG00000020528.15_61620476_61652866_2	chr11	-	1914	13	NIC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	72.6714447970376	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGGATAGTTGTTCT	264	False	NA	-3	True	AATAAA	-26	NA	61652866	61620475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652305_61652401_61652779
ENSMUSG00000020528.15_61620618_61652866_1	chr11	-	1772	13	NIC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	0	-138	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	72.6714447970376	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAGAATCAAAAAGCTACT	264	False	NA	NA	False	AATAAA	-19	NA	61652866	61620617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652305_61652401_61652779
ENSMUSG00000020528.15_61620618_61652866_2	chr11	-	1581	11	FSM	ENSMUSG00000020528.15	ENSMUST00000168115.8	1771	11	48	142	0	-138	multi-exon	FALSE	canonical	3	49	junction_10	57.9565354382058	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAGAATCAAAAAGCTACT	264	False	NA	NA	False	AATAAA	-19	NA	61652866	61620617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61652779
ENSMUSG00000020528.15_61620618_61652866_3	chr11	-	1528	10	NIC	ENSMUSG00000020528.15	novel	1771	11	NA	NA	0	-138	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	77.5972508104078	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAGAATCAAAAAGCTACT	264	False	NA	NA	False	AATAAA	-19	NA	61652866	61620617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61647020_61647172_61652779
ENSMUSG00000020528.15_61620618_61652866_4	chr11	-	1624	11	FSM	ENSMUSG00000020528.15	ENSMUST00000151966.8	1734	11	-28	138	0	-138	multi-exon	FALSE	canonical	3	27	junction_8	65.5872701063248	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAGAATCAAAAAGCTACT	264	False	NA	NA	False	AATAAA	-19	NA	61652866	61620617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61647020_61647172_61647407_61647504_61652779
ENSMUSG00000020530.15_84723408_84761028_1	chr11	-	2758	13	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	536	221	0	-221	3prime_fragment	FALSE	canonical	3	268	junction_7	78.9034219790245	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAGAATGTGGTGTACAT	NA	False	NA	-6	True	AATAAA	-20	NA	84761028	84723407	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ENSMUSG00000020530.15_84723798_84760879_1	chr11	-	2219	13	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	685	611	149	0	3prime_fragment	FALSE	canonical	3	268	junction_7	78.9034219790245	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGACTACTGCGCCTTCTC	NA	False	NA	NA	False	AATAAA	-34	NA	84760879	84723797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ENSMUSG00000020530.15_84742657_84761028_1	chr11	-	1580	6	NIC	ENSMUSG00000020530.15	novel	386	4	NA	NA	0	551	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	192.335748107314	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGTTTTGTTTGTAT	NA	False	NA	0	True	ATTAAA	-16	NA	84761028	84742656	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_84743363_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ENSMUSG00000020530.15_84748755_84761028_1	chr11	-	955	5	NNC	ENSMUSG00000020530.15	novel	386	4	NA	NA	0	2790	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	230.740519848595	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGAGTTAAATATCTCAG	NA	False	NA	-30	True	AATAAA	-15	NA	84761028	84748754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_84748950_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ENSMUSG00000020532.19_84070657_84184773_1	chr11	+	3886	30	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	0	-17454	combination_of_known_junctions	TRUE	canonical	3	66	junction_1	19.7139472106792	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTCCCAGAGTCTGGTC	NA	False	NA	NA	False	NA	NA	NA	84070656	84184773	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_84070753_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722
ENSMUSG00000020534.15_60679109_60701988_1	chr11	-	2576	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	103	179	-71	-179	multi-exon	FALSE	canonical	3	983	junction_2	78.1211180853749	2909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTGAAAGAGTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	60701988	60679108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ENSMUSG00000020534.15_60679727_60701988_1	chr11	-	1958	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	103	797	-71	0	multi-exon	FALSE	canonical	3	983	junction_2	78.1211180853749	1971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTCTGCTTACTCGG	NA	False	NA	-16	True	ATTAAA	-12	NA	60701988	60679726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ENSMUSG00000020537.10_60345417_60359580_2	chr11	+	1783	13	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	135.531950927529	1531	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGGAACTTGTGTTTCT	NA	False	NA	40	True	NA	NA	NA	60345416	60359580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_60345570_60347376_60347533_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ENSMUSG00000020538.16_60090423_60093041_1	chr11	-	1334	7	ISM	ENSMUSG00000020538.16	ENSMUST00000134660.8	4063	18	4973	508	0	-508	3prime_fragment	FALSE	canonical	3	399	junction_6	45.5036628562288	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	6968	False	NA	-4	True	ATTAAA	-19	NA	60093041	60090422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984
ENSMUSG00000020547.6_36141834_36206765_1	chr12	-	1803	12	NNC	ENSMUSG00000020547.6	novel	1871	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	312.709381094961	2316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATGGTCAGAGCGTGT	NA	False	NA	-11	True	AATAAA	-21	NA	36206765	36141833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180159_36184889_36184955_36206666
ENSMUSG00000020547.6_36141834_36206824_1	chr12	-	1862	12	NNC	ENSMUSG00000020547.6	novel	1871	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	314.251623137619	3522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATGGTCAGAGCGTGT	NA	False	NA	-11	True	AATAAA	-21	NA	36206824	36141833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174029_36179990_36180168_36184889_36184955_36206666
ENSMUSG00000020547.6_36141834_36206824_2	chr12	-	1862	12	NNC	ENSMUSG00000020547.6	novel	1871	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	314.323305683603	2559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATGGTCAGAGCGTGT	NA	False	NA	-11	True	AATAAA	-21	NA	36206824	36141833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164068_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
ENSMUSG00000020547.6_36141834_36206824_3	chr12	-	1862	12	NNC	ENSMUSG00000020547.6	novel	1871	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	314.251623137619	3279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATGGTCAGAGCGTGT	NA	False	NA	-11	True	AATAAA	-21	NA	36206824	36141833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179999_36180168_36184889_36184955_36206666
ENSMUSG00000020547.6_36157725_36206824_1	chr12	-	2966	8	ISM	ENSMUSG00000020547.6	ENSMUST00000221521.2	2533	11	-59	8301	0	2023	5prime_fragment	FALSE	canonical	3	931	junction_5	43.6829953372322	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGGCCAGGCCTTTAAG	NA	False	NA	NA	False	NA	NA	NA	36206824	36157724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
ENSMUSG00000020553.9_89874254_89893720_1	chr11	-	1327	7	NNC	ENSMUSG00000020553.9	novel	2723	6	NA	NA	0	-763	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.9547972583658	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTCTGTGTGCTGTCTC	NA	False	NA	-12	True	AATAAA	-14	NA	89893720	89874253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_89874659_89875291_89875583_89876918_89876987_89878021_89878194_89879520_89879601_89881896_89882015_89893527
ENSMUSG00000020570.16_33004183_33025831_1	chr12	+	947	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	0	1072	0	118	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGGGTTTAAAAATTTG	8425	False	NA	NA	False	AATAAA	-23	NA	33004182	33025831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ENSMUSG00000020570.16_33004183_33026631_1	chr12	+	1747	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	0	272	0	-272	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAAGATTCATTCTTC	8425	False	NA	NA	False	AATAAA	-16	NA	33004182	33026631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ENSMUSG00000020571.14_17315777_17334372_1	chr12	+	1795	14	NNC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	-769	-399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	776.54654241995	5729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGATAAATGTATGAAAT	NA	False	NA	15	True	AATAAA	-17	NA	17315776	17334372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_17315821_17316570_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ENSMUSG00000020571.14_17315777_17334372_2	chr12	+	1774	14	NNC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	-769	-399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	776.54654241995	5771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGATAAATGTATGAAAT	NA	False	NA	15	True	AATAAA	-17	NA	17315776	17334372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_17315821_17316591_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ENSMUSG00000020571.14_17316596_17334372_1	chr12	+	1721	13	NNC	ENSMUSG00000020571.14	novel	2125	13	NA	NA	0	-399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	796.398385789982	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGATAAATGTATGAAAT	NA	False	NA	15	True	AATAAA	-17	NA	17316595	17334372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333293_17333938
ENSMUSG00000020571.14_17316596_17334372_2	chr12	+	1719	13	NNC	ENSMUSG00000020571.14	novel	2125	13	NA	NA	0	-399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	808.198352132005	1037	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGATAAATGTATGAAAT	NA	False	NA	15	True	AATAAA	-17	NA	17316595	17334372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328843_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ENSMUSG00000020572.9_32870334_32901099_1	chr12	+	2278	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	0	2249	0	-2249	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGTGGTGTTGTACA	NA	False	NA	14	True	AATAAA	-17	NA	32870333	32901099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ENSMUSG00000020572.9_32870504_32901099_1	chr12	+	2108	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	170	2249	170	-2249	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGTGGTGTTGTACA	NA	False	NA	14	True	AATAAA	-17	NA	32870503	32901099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ENSMUSG00000020572.9_32870504_32901607_1	chr12	+	2616	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	170	1741	170	-1741	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	NA	False	NA	14	True	ATTAAA	-18	NA	32870503	32901607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ENSMUSG00000020576.11_13319134_13532425_1	chr12	+	5150	43	ISM	ENSMUSG00000020576.11	ENSMUST00000042953.10	7234	52	0	101387	0	-36721	5prime_fragment	TRUE	canonical	3	21	junction_37	7.71457965342409	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTTTGACACTTTGA	NA	False	NA	NA	False	NA	NA	NA	13319133	13532425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386
ENSMUSG00000020577.18_36065554_36092510_1	chr12	-	956	6	FSM	ENSMUSG00000020577.18	ENSMUST00000020896.17	1932	6	-22	998	-11	-998	multi-exon	FALSE	canonical	3	804	junction_3	64.3913037606787	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCCAGACATTTTTTT	NA	False	NA	-8	True	ATTAAA	-15	NA	36092510	36065553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_36065772_36070488_36070603_36071799_36071914_36072751_36072833_36073903_36074072_36092249
ENSMUSG00000020585.5_8972072_8988226_1	chr12	+	849	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	408	516	408	-516	multi-exon	FALSE	canonical	3	924	junction_4	59.5158708991886	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTCTTGTTTATTTTA	NA	False	NA	13	True	AATAAA	-13	NA	8972071	8988226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ENSMUSG00000020585.5_8972072_8988742_1	chr12	+	1365	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	408	0	408	0	multi-exon	FALSE	canonical	3	924	junction_4	59.5158708991886	4451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTCATGTTTATGCTA	NA	False	NA	38	True	AATAAA	-29	NA	8972071	8988742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ENSMUSG00000020589.18_12312178_12423000_1	chr12	+	1375	12	FSM	ENSMUSG00000020589.18	ENSMUST00000069005.10	1771	12	0	396	0	-340	multi-exon	FALSE	canonical	3	60	junction_1	14.2718586881045	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGATGTCTGAAGCGAA	NA	False	NA	16	True	CATAAA	-18	NA	12312177	12423000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_12312240_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
ENSMUSG00000020592.15_8821323_8843064_1	chr12	+	246	2	NNC	ENSMUSG00000020592.15	novel	3157	5	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTATGAACTCTACTGCT	NA	False	NA	7	True	AATAAA	-16	NA	8821322	8843064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_8821459_8842954
ENSMUSG00000020605.10_8363432_8372505_1	chr12	+	1219	3	ISM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	0	21319	0	-1493	5prime_fragment	FALSE	canonical	3	118	junction_1	13.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTACTGAGTGACATTCA	NA	False	NA	NA	False	CATAAA	-17	NA	8363431	8372505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_8363498_8367784_8367951_8371518
ENSMUSG00000020605.10_8363432_8392960_1	chr12	+	2095	7	FSM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	0	864	0	-864	multi-exon	FALSE	canonical	3	118	junction_1	12.8765506078125	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCACTTTGTTCCTTG	NA	False	NA	NA	False	AATGAA	-24	NA	8363431	8392960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_8363498_8367784_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ENSMUSG00000020608.8_11316170_11335801_1	chr12	+	1479	10	FSM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	40	1854	0	-1854	multi-exon	FALSE	canonical	3	624	junction_2	43.5943704599856	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTCCTGTTCATAGAG	4600	False	NA	NA	False	AATAAA	-22	NA	11316169	11335801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
ENSMUSG00000020608.8_11316170_11336381_1	chr12	+	2059	10	FSM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	40	1274	0	-1274	multi-exon	FALSE	canonical	3	624	junction_2	43.5943704599856	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTCTGTTTAATTT	4600	False	NA	NA	False	NA	NA	NA	11316169	11336381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
ENSMUSG00000020608.8_11316170_11368248_1	chr12	+	3782	27	FSM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	283	1538	0	204	multi-exon	TRUE	canonical	3	574	junction_19	50.8148542090207	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4600	False	NA	15	True	AATAAA	-16	NA	11316169	11368248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUSG00000020608.8_11316170_11368248_2	chr12	+	3558	25	NIC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	0	204	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	124.985825585233	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4600	False	NA	15	True	AATAAA	-16	NA	11316169	11368248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_11316290_11321729_11321873_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUSG00000020610.18_109316808_109327584_1	chr11	+	1390	9	FSM	ENSMUSG00000020610.18	ENSMUST00000092500.11	2816	9	36	1390	0	-231	multi-exon	FALSE	canonical	3	91	junction_1	26.8953411393126	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTCGTGGGTAGAGTTC	NA	False	NA	12	True	AATAAA	-14	NA	109316807	109327584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ENSMUSG00000020610.18_109316808_109327815_1	chr11	+	1621	9	FSM	ENSMUSG00000020610.18	ENSMUST00000092500.11	2816	9	36	1159	0	0	multi-exon	FALSE	canonical	3	91	junction_1	26.8953411393126	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTGGCCCTAGGAAT	NA	False	NA	19	True	AATAAA	-15	NA	109316807	109327815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ENSMUSG00000020610.18_109317046_109327584_1	chr11	+	1607	8	FSM	ENSMUSG00000020610.18	ENSMUST00000103061.3	1832	8	-6	231	0	-231	multi-exon	FALSE	canonical	3	149	junction_3	12.4638252063927	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTCGTGGGTAGAGTTC	NA	False	NA	12	True	AATAAA	-14	NA	109317045	109327584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ENSMUSG00000020612.17_109541747_109558621_1	chr11	+	1498	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	0	1861	0	819	multi-exon	TRUE	canonical	3	1417	junction_9	119.858458191318	2925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGTCACCGCTTCTC	NA	False	NA	28	True	AATAAA	-17	NA	109541746	109558621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ENSMUSG00000020612.17_109541747_109560003_1	chr11	+	2880	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	0	479	0	-479	multi-exon	FALSE	canonical	3	1417	junction_9	119.858458191318	3206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAATTTGATATTTGTTT	NA	False	NA	11	True	AATAAA	-21	NA	109541746	109560003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ENSMUSG00000020617.14_109682383_109704939_1	chr11	-	836	5	NIC	ENSMUSG00000020617.14	novel	919	5	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1.22474487139159	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATGGTGGTCCCTCAC	NA	False	NA	NA	False	NA	NA	NA	109704939	109682382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_109682621_109684931_109685106_109688103_109688238_109704384_109704573_109704837
ENSMUSG00000020628.17_28741026_28800466_1	chr12	-	2826	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	5	399	-1	-398	multi-exon	FALSE	canonical	3	62	junction_11	21.4240924087157	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGGCCTAAACAATCACA	8235	False	NA	-19	True	NA	NA	NA	28800466	28741025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
ENSMUSG00000020629.13_28725230_28731607_1	chr12	+	1085	4	FSM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	0	567	0	-122	multi-exon	FALSE	canonical	3	316	junction_2	13.6950923894494	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTATGTGATTTTTATA	NA	False	NA	8	True	ATTAAA	-15	NA	28725229	28731607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_28725372_28727776_28727897_28729388_28729569_28730964
ENSMUSG00000020629.13_28725230_28731974_1	chr12	+	1452	4	FSM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	0	200	0	-200	multi-exon	FALSE	canonical	3	316	junction_2	13.6950923894494	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTGAGAAATCATTTTA	NA	False	NA	NA	False	NA	NA	NA	28725229	28731974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_28725372_28727776_28727897_28729388_28729569_28730964
ENSMUSG00000020630.10_28699623_28709590_1	chr12	+	1310	7	NIC	ENSMUSG00000020630.10	novel	1455	8	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	87.5112691155958	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTAGTTTGAGTTACT	NA	False	NA	15	True	AATAAA	-23	NA	28699622	28709590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707631_28707717_28708991
ENSMUSG00000020644.10_25143934_25146089_1	chr12	-	1134	3	FSM	ENSMUSG00000020644.10	ENSMUST00000020974.7	1270	3	2	134	2	-134	multi-exon	FALSE	canonical	2	5	junction_1	1	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGATTGCTTGCTTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	25146089	25143933	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_25144576_25145309_25145374_25145661
ENSMUSG00000020646.18_24881614_25009539_2	chr12	+	2025	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	-8	334	0	-334	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTCCCGGATGGTATT	NA	False	NA	49	True	AATGAA	-26	NA	24881613	25009539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ENSMUSG00000020646.18_24881614_25010304_2	chr12	+	2790	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	-8	-431	0	0	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAGATTCTATCTAAACA	NA	False	NA	NA	False	ATTAAA	-31	NA	24881613	25010304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ENSMUSG00000020649.12_24758240_24763340_1	chr12	+	1388	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	0	805	0	0	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	2072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTAAAAAGCTGTGTAG	NA	False	NA	56	True	ATTAAA	-13	NA	24758239	24763340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ENSMUSG00000020649.12_24758240_24763797_1	chr12	+	1845	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	0	348	0	-348	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	4169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTCACTTTTTTTTTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	24758239	24763797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ENSMUSG00000020650.16_31666779_31684634_1	chr12	-	938	6	ISM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	0	25813	0	17295	5prime_fragment	FALSE	canonical	3	313	junction_1	47.6931860961291	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACATTTTCTTCTGTCAT	NA	False	NA	NA	False	TATAAA	-20	NA	31684634	31666778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ENSMUSG00000020652.18_4263482_4283938_1	chr12	-	2217	7	NNC	ENSMUSG00000020652.18	novel	4348	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	27.9026084005699	84	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCTGCAGATTCTTTGT	NA	False	NA	-9	True	AATAAA	-19	NA	4283938	4263481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281445_4281683_4283530_4283658_4283781
ENSMUSG00000020654.16_4263482_4283938_1	chr12	+	2147	7	NNC	ENSMUSG00000020654.16	novel	5621	21	NA	NA	10214	20413	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	276	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACGTAACCCACTGATC	NA	False	NA	NA	False	NA	NA	NA	4263481	4283938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283781
ENSMUSG00000020654.16_4263482_4283938_2	chr12	+	2177	7	NIC	ENSMUSG00000020654.16	novel	5621	21	NA	NA	10214	20413	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACGTAACCCACTGATC	NA	False	NA	NA	False	NA	NA	NA	4263481	4283938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283751
ENSMUSG00000020659.17_31536900_31549556_1	chr12	-	1876	6	FSM	ENSMUSG00000020659.17	ENSMUST00000101499.10	3900	6	59	1965	0	0	multi-exon	FALSE	canonical	3	107	junction_4	37.6542162313864	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTATTTTTATGTG	NA	False	NA	-20	True	ATTAAA	-16	NA	31549556	31536899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580_31544749_31549521
ENSMUSG00000020659.17_31536900_31549556_2	chr12	-	1867	6	FSM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	-2	2072	0	0	multi-exon	FALSE	canonical	3	23	junction_4	65.6310901935965	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTATTTTTATGTG	NA	False	NA	-20	True	ATTAAA	-16	NA	31549556	31536899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589_31544749_31549521
ENSMUSG00000020659.17_31537278_31549556_1	chr12	-	1498	6	FSM	ENSMUSG00000020659.17	ENSMUST00000101499.10	3900	6	59	2343	0	0	multi-exon	FALSE	canonical	3	107	junction_4	37.6542162313864	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGTGTTTTGAACTGAA	NA	False	NA	NA	False	NA	NA	NA	31549556	31537277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580_31544749_31549521
ENSMUSG00000020659.17_31537278_31549556_2	chr12	-	1489	6	FSM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	-2	2450	0	0	multi-exon	FALSE	canonical	3	23	junction_4	65.6310901935965	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGTGTTTTGAACTGAA	NA	False	NA	NA	False	NA	NA	NA	31549556	31537277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589_31544749_31549521
ENSMUSG00000020664.11_31381561_31401413_1	chr12	-	2220	14	FSM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	39	285	0	-285	multi-exon	FALSE	canonical	3	710	junction_4	70.0417457938204	1804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGGTTATTCTGAGTG	NA	False	NA	-10	True	AATAAA	-18	NA	31401413	31381560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ENSMUSG00000020664.11_31381561_31401413_2	chr12	-	2214	14	NNC	ENSMUSG00000020664.11	novel	2544	14	NA	NA	0	-285	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	232.801055326102	1798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGGTTATTCTGAGTG	NA	False	NA	-10	True	AATAAA	-18	NA	31401413	31381560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391472_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ENSMUSG00000020664.11_31381708_31401413_1	chr12	-	2073	14	FSM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	39	432	0	-432	multi-exon	FALSE	canonical	3	710	junction_4	70.0417457938204	1519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTAACTTCCAAATTG	NA	False	NA	-4	True	AATAAA	-16	NA	31401413	31381707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ENSMUSG00000020668.11_3438128_3454064_1	chr12	+	1924	6	ISM	ENSMUSG00000020668.11	ENSMUST00000219895.2	2962	8	747	869	747	0	3prime_fragment	FALSE	canonical	3	43	junction_1	11.2071405808975	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATTGACCTTTATT	NA	False	NA	4	True	AGTAAA	-19	NA	3438127	3454064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
ENSMUSG00000020671.10_3297428_3359622_1	chr12	-	3166	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	347	0	347	0	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGGTTTGGTTTTCAT	NA	False	NA	-2	True	TATAAA	-19	NA	3359622	3297427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ENSMUSG00000020671.10_3299431_3359622_1	chr12	-	1163	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	347	2003	347	-2003	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTTGTACAACAGTG	NA	False	NA	-16	True	AATAAA	-16	NA	3359622	3299430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ENSMUSG00000020671.10_3299701_3359622_1	chr12	-	893	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	347	2273	347	-2273	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATATTTTTGTTTCTCAT	NA	False	NA	-4	True	AATAAA	-27	NA	3359622	3299700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ENSMUSG00000020680.16_83363941_83381046_1	chr11	+	1859	7	FSM	ENSMUSG00000020680.16	ENSMUST00000134185.8	881	7	29	-1007	0	1007	multi-exon	FALSE	canonical	3	28	junction_5	8.74960316560446	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAATAACAAAAGGTAGAT	8683	False	NA	NA	False	NA	NA	NA	83363940	83381046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750
ENSMUSG00000020680.16_83363941_83397569_1	chr11	+	2018	17	NNC	ENSMUSG00000020680.16	novel	2068	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	27.3723600325219	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAGTGCATTATTTGTC	8683	False	NA	41	True	AATAAA	-21	NA	83363940	83397569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750_83379872_83388087_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395542_83395568_83395931_83397243
ENSMUSG00000020687.14_104399173_104441446_1	chr11	-	2469	17	ISM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	-137	5602	0	0	5prime_fragment	FALSE	canonical	3	109	junction_6	38.162430396268	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAGTTATGCTGCAGCT	2066	False	NA	NA	False	NA	NA	NA	104441446	104399172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ENSMUSG00000020687.14_104413601_104441446_1	chr11	-	1370	10	ISM	ENSMUSG00000020687.14	ENSMUST00000106961.2	1863	11	-142	2521	0	-2521	5prime_fragment	FALSE	canonical	3	32	junction_2	62.6666666666667	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCTCGGAGAAGTTCCC	2066	False	NA	NA	False	NA	NA	NA	104441446	104413600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_104413649_104416876_104417011_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ENSMUSG00000020691.14_105017305_105030831_1	chr11	+	1424	9	FSM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	54	389	0	-389	multi-exon	TRUE	canonical	3	226	junction_6	21.0698243941424	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCCATTAATGCGTATT	NA	False	NA	NA	False	AAAAAG	-16	NA	105017304	105030831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ENSMUSG00000020691.14_105017305_105031972_1	chr11	+	2565	9	FSM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	54	-752	0	752	multi-exon	FALSE	canonical	3	226	junction_6	21.0698243941424	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTGGTGGTGTGGCTT	NA	False	NA	4	True	AATAAA	-14	NA	105017304	105031972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ENSMUSG00000020698.12_82644423_82655132_1	chr11	-	730	5	ISM	ENSMUSG00000020698.12	ENSMUST00000021040.10	1787	14	0	34347	0	-34347	5prime_fragment	FALSE	canonical	2	8	junction_4	0.82915619758885	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTGTGCACGTGACTC	NA	False	NA	NA	False	ATTAAA	-11	NA	82655132	82644422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_82644564_82645787_82645962_82651175_82651311_82653013_82653078_82654916
ENSMUSG00000020706.14_106139968_106146636_1	chr11	-	2869	21	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	183.727209470998	1334	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTTTCTGATAGTTTA	NA	False	NA	-14	True	AATAAA	-13	NA	106146636	106139967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146498_106146586
ENSMUSG00000020708.13_106146980_106153946_1	chr11	+	570	6	NNC	ENSMUSG00000020708.13	novel	1316	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1036.59183867133	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACAACTCCAGTTTGTT	4536	False	NA	15	True	AATAAA	-19	NA	106146979	106153946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_106147041_106153034_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
ENSMUSG00000020708.13_106146980_106153946_2	chr11	+	1046	10	NNC	ENSMUSG00000020708.13	novel	1316	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	817.588836869022	979	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACAACTCCAGTTTGTT	4536	False	NA	15	True	AATAAA	-19	NA	106146979	106153946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152465_106153014_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
ENSMUSG00000020717.20_106545044_106615254_1	chr11	-	3317	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9034	0	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_16	423.912869695826	1053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	390	False	NA	-10	True	AATAAA	-18	NA	106615254	106545043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ENSMUSG00000020717.20_106545044_106615254_10	chr11	-	3200	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9034	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	456.524559546787	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	390	False	NA	-10	True	AATAAA	-18	NA	106615254	106545043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ENSMUSG00000020717.20_106545044_106615254_2	chr11	-	3240	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9034	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	462.558633900523	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	390	False	NA	-10	True	AATAAA	-18	NA	106615254	106545043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ENSMUSG00000020717.20_106545044_106615254_3	chr11	-	3209	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9034	0	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_14	370.599266494863	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	390	False	NA	-10	True	AATAAA	-18	NA	106615254	106545043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ENSMUSG00000020717.20_106545044_106615254_4	chr11	-	3294	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9034	0	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_15	368.337888357959	1040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	390	False	NA	-10	True	AATAAA	-18	NA	106615254	106545043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ENSMUSG00000020717.20_106545044_106615254_5	chr11	-	3197	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9034	0	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_14	370.771513611985	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	390	False	NA	-10	True	AATAAA	-18	NA	106615254	106545043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ENSMUSG00000020717.20_106545044_106615254_6	chr11	-	3212	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9034	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	456.395913206765	497	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	390	False	NA	-10	True	AATAAA	-18	NA	106615254	106545043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ENSMUSG00000020717.20_106545044_106615254_7	chr11	-	3237	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9034	0	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_14	378.799506766483	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	390	False	NA	-10	True	AATAAA	-18	NA	106615254	106545043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ENSMUSG00000020717.20_106545044_106615254_8	chr11	-	3266	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9034	0	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_15	360.626097533473	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	390	False	NA	-10	True	AATAAA	-18	NA	106615254	106545043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ENSMUSG00000020717.20_106545044_106615254_9	chr11	-	3235	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9034	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_4	494.225031966434	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	390	False	NA	-10	True	AATAAA	-18	NA	106615254	106545043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ENSMUSG00000020718.13_106659079_106670364_1	chr11	-	1404	8	NIC	ENSMUSG00000020718.13	novel	1770	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	16.8001457719623	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTGGACTTTTGTA	4296	False	NA	NA	False	AATAAA	-33	NA	106670364	106659078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669909
ENSMUSG00000020719.15_106671311_106679320_1	chr11	-	3391	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	38	130	0	-130	multi-exon	FALSE	canonical	3	3830	junction_8	158.443711526277	7862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTATGGAAATGATTGTG	9654	False	NA	NA	False	NA	NA	NA	106679320	106671310	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ENSMUSG00000020719.15_106672374_106679320_1	chr11	-	2328	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	38	1193	0	0	multi-exon	FALSE	canonical	3	3830	junction_8	158.443711526277	6645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ENSMUSG00000020719.15_106672374_106679320_2	chr11	-	1906	10	NNC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1334.5135424797	1346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676314_106677810_106677901_106679098
ENSMUSG00000020719.15_106672374_106679320_3	chr11	-	2048	11	NNC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1273.75158096075	2016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676314_106677304_106677371_106677734_106677901_106679098
ENSMUSG00000020719.15_106672374_106679320_4	chr11	-	1991	10	NNC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1334.5135424797	1757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676346_106677757_106677901_106679098
ENSMUSG00000020719.15_106672374_106680011_1	chr11	-	2463	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	497	junction_13	995.534526816042	5788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	8963	False	NA	-9	True	AATAAA	-45	NA	106680011	106672373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
ENSMUSG00000020720.14_107370310_107388617_1	chr11	+	1522	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	0	382	0	58	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	4525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTGTATATGTTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	107370309	107388617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ENSMUSG00000020720.14_107370310_107388866_1	chr11	+	1771	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	0	133	0	-133	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	5764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCAGGGTGGTGATTAA	NA	False	NA	14	True	AATAAA	-26	NA	107370309	107388866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ENSMUSG00000020728.18_108316092_108363011_1	chr11	+	824	6	ISM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	74	388430	0	-608	5prime_fragment	FALSE	canonical	3	43	junction_4	6.34350061086148	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTATTAAACGTTTATTA	NA	False	NA	NA	False	ATTAAA	-21	NA	108316091	108363011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842
ENSMUSG00000020736.13_115381246_115382650_1	chr11	-	759	4	NIC	ENSMUSG00000020736.13	novel	858	5	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	87.1359091687616	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGATCTTTGATGCT	NA	False	NA	-8	True	AATAAA	-19	NA	115382650	115381245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_115381571_115381678_115381794_115382096_115382198_115382432
ENSMUSG00000020736.13_115381246_115382650_2	chr11	-	1098	3	FSM	ENSMUSG00000020736.13	ENSMUST00000124778.8	907	3	27	-218	-9	0	multi-exon	FALSE	canonical	3	183	junction_2	15.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGATCTTTGATGCT	NA	False	NA	-8	True	AATAAA	-19	NA	115382650	115381245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115382025_115382096_115382198_115382432
ENSMUSG00000020736.13_115381246_115382650_3	chr11	-	928	4	NIC	ENSMUSG00000020736.13	novel	836	5	NA	NA	-9	0	intron_retention	FALSE	canonical	3	183	junction_3	12.8322510366134	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGATCTTTGATGCT	NA	False	NA	-8	True	AATAAA	-19	NA	115382650	115381245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_115381794_115381963_115382025_115382096_115382198_115382432
ENSMUSG00000020737.13_115388858_115405213_2	chr11	-	696	5	FSM	ENSMUSG00000020737.13	ENSMUST00000021083.7	1375	5	0	679	0	0	multi-exon	FALSE	canonical	3	1461	junction_2	125.475844288851	4664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTACCGCTGTCTTTCCCT	NA	False	NA	-12	True	ATTAAA	-14	NA	115405213	115388857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115389126_115391491_115391511_115392830_115392929_115393857_115394001_115405045
ENSMUSG00000020738.17_115414358_115427061_1	chr11	-	576	4	FSM	ENSMUSG00000020738.17	ENSMUST00000021084.10	1000	4	-6	430	-6	-430	multi-exon	FALSE	canonical	0	0	junction_2	1872.39424860851	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCATAGTGCTCTCTCTT	NA	False	NA	NA	False	CATAAA	-19	NA	115427061	115414357	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115414596_115421171_115421244_115425381_115425510_115426923
ENSMUSG00000020739.12_115455351_115474732_1	chr11	+	2036	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_16	299.37137842857	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455350	115474732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473910_115474039_115474151_115474254_115474546
ENSMUSG00000020739.12_115455351_115474732_2	chr11	+	2054	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	240.944546921814	1712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455350	115474732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_115455383_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ENSMUSG00000020739.12_115455351_115474732_3	chr11	+	2729	18	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	862	junction_15	82.7709559076643	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455350	115474732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ENSMUSG00000020740.14_115475081_115494714_1	chr11	-	3653	17	FSM	ENSMUSG00000020740.14	ENSMUST00000019135.14	3816	17	163	0	0	0	multi-exon	TRUE	canonical	3	352	junction_6	42.6075385788712	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3544	False	NA	-2	True	AATAAA	-15	NA	115494714	115475080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ENSMUSG00000020743.16_115498744_115503746_1	chr11	-	1266	6	FSM	ENSMUSG00000020743.16	ENSMUST00000106506.8	993	6	-42	-231	0	0	multi-exon	FALSE	canonical	2	5	junction_2	146.078608974757	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503746	115498743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115499440_115499886_115499923_115500105_115500262_115500364_115500475_115502728_115502861_115503610
ENSMUSG00000020743.16_115498744_115503746_2	chr11	-	1896	4	FSM	ENSMUSG00000020743.16	ENSMUST00000142637.2	621	4	-16	-1259	0	0	multi-exon	FALSE	canonical	3	324	junction_3	34.4222150491349	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503746	115498743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115500262_115500364_115500475_115502728_115502861_115503610
ENSMUSG00000020743.16_115498744_115503746_3	chr11	-	1305	6	NNC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	134.525239267581	973	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503746	115498743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503628
ENSMUSG00000020743.16_115498744_115503746_4	chr11	-	1449	5	NIC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	324	junction_4	32.8129166640212	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503746	115498743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_115499440_115499886_115500262_115500364_115500475_115502728_115502861_115503610
ENSMUSG00000020745.16_74568197_74615176_1	chr11	-	2061	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	320	3422	-15	-3421	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATAGTTGACAGTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	74615176	74568196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ENSMUSG00000020745.16_74568386_74614874_1	chr11	-	1570	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	622	3611	-190	-3610	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTGGATGTAGATTGA	NA	False	NA	-8	True	AATAAA	-20	NA	74614874	74568385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ENSMUSG00000020745.16_74568386_74615176_1	chr11	-	1872	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	320	3611	-15	-3610	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTGGATGTAGATTGA	NA	False	NA	-8	True	AATAAA	-20	NA	74615176	74568385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ENSMUSG00000020752.12_115783421_115824305_1	chr11	-	3940	20	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	21	junction_1	17.3698564000207	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTTGGGTGTTTTAC	NA	False	NA	-2	True	AATAAA	-33	NA	115824305	115783420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_115783469_115783501_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ENSMUSG00000020755.10_115824463_115855475_1	chr11	+	1113	10	NIC	ENSMUSG00000020755.10	novel	3654	11	NA	NA	0	-886	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	100.552915864677	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGCATGTCAGGTGGAC	399	False	NA	16	True	ATTAAA	-17	NA	115824462	115855475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_115824608_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ENSMUSG00000020755.10_115824463_115855475_2	chr11	+	1223	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	355	2076	0	-886	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGCATGTCAGGTGGAC	399	False	NA	16	True	ATTAAA	-17	NA	115824462	115855475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ENSMUSG00000020755.10_115824463_115855475_3	chr11	+	1218	11	NNC	ENSMUSG00000020755.10	novel	3654	11	NA	NA	0	-886	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	98.0122441330674	957	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGCATGTCAGGTGGAC	399	False	NA	16	True	ATTAAA	-17	NA	115824462	115855475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853324_115853379_115854768_115854854_115855036
ENSMUSG00000020755.10_115824463_115857551_1	chr11	+	3299	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	355	0	0	0	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGGTTTTGTGGAGT	399	False	NA	7	True	NA	NA	NA	115824462	115857551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ENSMUSG00000020774.10_73195818_73215460_1	chr11	-	1683	7	NIC	ENSMUSG00000020774.10	novel	1530	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	6.39444203108363	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTGATGACTGTGATA	NA	False	NA	NA	False	ATTAAA	-16	NA	73215460	73195817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_73196460_73199534_73199645_73204335_73204444_73210620_73210715_73212911_73213108_73213904_73214058_73215080
ENSMUSG00000020775.14_116022643_116029700_1	chr11	-	770	5	NNC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	349.858810808017	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTCTTCACTTTCGGG	401	False	NA	-2	True	AATAAA	-20	NA	116029700	116022642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_116022957_116023245_116023383_116023568_116023654_116029377_116029448_116029536
ENSMUSG00000020775.14_116022903_116029630_1	chr11	-	1087	9	FSM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	64	260	-15	-256	multi-exon	FALSE	canonical	3	763	junction_8	33.509093914936	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCGCTTCCCCCACGAG	471	False	NA	NA	False	NA	NA	NA	116029630	116022902	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267_116029448_116029536
ENSMUSG00000020777.17_116089681_116106144_1	chr11	-	907	4	NNC	ENSMUSG00000020777.17	novel	3987	14	NA	NA	-16273	-9826	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGACGGCTCGAGGGGG	4584	False	NA	NA	False	NA	NA	NA	116106144	116089680	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_116089810_116095670_116095806_116096436_116096600_116105664
ENSMUSG00000020778.13_116089681_116106144_1	chr11	+	744	3	NIC	ENSMUSG00000020778.13	novel	902	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	63.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTGCTGATGCGG	9067	False	NA	7	True	AATAAA	-14	NA	116089680	116106144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_116089810_116095670_116095806_116105664
ENSMUSG00000020780.16_116135992_116138033_1	chr11	-	1026	4	NNC	ENSMUSG00000020780.16	novel	2330	15	NA	NA	14131	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	284.738866722164	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCTGGTTTTTGCA	834	False	NA	-2	True	ATTAAA	-17	NA	116138033	116135991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_116136757_116137045_116137099_116137470_116137547_116137901
ENSMUSG00000020780.16_116136396_116164961_1	chr11	-	2040	16	FSM	ENSMUSG00000020780.16	ENSMUST00000021133.16	2526	16	82	404	0	-404	multi-exon	FALSE	canonical	3	572	junction_9	48.1105209099031	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGTGTTTGTGACTTA	9899	False	NA	-6	True	NA	NA	NA	116164961	116136395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ENSMUSG00000020782.19_115714875_115736467_1	chr11	+	799	6	ISM	ENSMUSG00000020782.19	ENSMUST00000103032.11	3551	26	0	10139	0	165	5prime_fragment	FALSE	canonical	3	674	junction_1	80.564508314766	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTGCGTCTCAGTCAA	6800	False	NA	NA	False	AGTAAA	-16	NA	115714874	115736467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199
ENSMUSG00000020783.15_72926079_72970891_1	chr11	+	2827	14	NNC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	-12530	-9252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.3019064967114	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGTCATTATTTTGAAT	NA	False	NA	26	True	AATATA	-31	NA	72926078	72970891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_72926130_72938686_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ENSMUSG00000020790.15_72580832_72661319_1	chr11	+	6377	25	FSM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	0	1653	0	-728	multi-exon	FALSE	canonical	0	0	junction_4	42.0138659320415	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTACTAGTCTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	72580831	72661319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ENSMUSG00000020792.16_116179714_116197553_1	chr11	-	2311	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	7	887	0	175	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTCTGCTTTCATCCC	8927	False	NA	1	True	NA	NA	NA	116197553	116179713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ENSMUSG00000020792.16_116179935_116197553_2	chr11	-	2090	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	7	1108	0	0	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGAGCCGGGTGAGTGT	8927	False	NA	-6	True	CATAAA	-15	NA	116197553	116179934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ENSMUSG00000020799.17_72235548_72236809_2	chr11	-	504	3	NNC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	15313	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	26	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAGCACAGAGCTCTCA	NA	False	NA	-1	True	ATTAAA	-17	NA	72236809	72235547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_72235798_72236411_72236609_72236752
ENSMUSG00000020801.9_72102550_72105879_1	chr11	-	622	4	FSM	ENSMUSG00000020801.9	ENSMUST00000021157.9	1161	4	539	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	14.0079342596338	1603	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGATTGCTCCACTTTGA	NA	False	NA	-5	True	AATAAA	-15	NA	72105879	72102549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_72102904_72104602_72104700_72104963_72105042_72105786
ENSMUSG00000020803.4_72098373_72100613_1	chr11	+	753	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	0	228	0	-228	multi-exon	FALSE	canonical	3	1302	junction_3	85.4959388249264	11511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTAAGTTTTTTAACACG	NA	False	NA	16	True	AATAAA	-16	NA	72098372	72100613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
ENSMUSG00000020805.15_72150656_72157497_1	chr11	-	890	3	NIC	ENSMUSG00000020805.15	novel	1746	11	NA	NA	-12	261	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	25	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGCTAGACTTATTTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	72157497	72150655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_72151209_72152848_72152978_72157289
ENSMUSG00000020808.4_71933328_71938196_1	chr11	+	1062	6	NNC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	106.202448182704	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTTTTTAGATATCT	NA	False	NA	14	True	AATAAA	-18	NA	71933327	71938196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_71933361_71933842_71934164_71935806_71936085_71936504_71936601_71937165_71937220_71937916
ENSMUSG00000020817.17_70833903_70860785_1	chr11	+	2413	17	NNC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	98102	26854	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	733	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTCAGGATTGAGGGG	NA	False	NA	NA	False	NA	NA	NA	70833902	70860785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_70834149_70834704_70834824_70834937_70835065_70835307_70835383_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUSG00000020817.17_70833903_70860785_2	chr11	+	2414	17	NNC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	98102	26854	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	733	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTCAGGATTGAGGGG	NA	False	NA	NA	False	NA	NA	NA	70833902	70860785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849261_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUSG00000020817.17_70833903_70860785_3	chr11	+	2651	16	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	98102	26854	intron_retention	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTCAGGATTGAGGGG	NA	False	NA	NA	False	NA	NA	NA	70833902	70860785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUSG00000020817.17_70833903_70860785_4	chr11	+	2434	17	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	98102	26854	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTCAGGATTGAGGGG	NA	False	NA	NA	False	NA	NA	NA	70833902	70860785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUSG00000020817.17_70833903_70860785_5	chr11	+	2419	17	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	98102	26854	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTCAGGATTGAGGGG	NA	False	NA	NA	False	NA	NA	NA	70833902	70860785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUSG00000020831.19_70126032_70128694_1	chr11	-	827	6	NIC	ENSMUSG00000020831.19	novel	880	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	207.23127177142	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	-12	True	ATTAAA	-15	NA	70128694	70126031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_70126295_70126521_70126627_70126849_70127038_70127713_70127805_70128356_70128452_70128609
ENSMUSG00000020831.19_70126032_70128694_2	chr11	-	760	5	NIC	ENSMUSG00000020831.19	novel	779	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	190.587742260619	1324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	-12	True	ATTAAA	-15	NA	70128694	70126031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_70126295_70126822_70127038_70127702_70127805_70128356_70128452_70128609
ENSMUSG00000020832.15_77964373_77971209_1	chr11	-	1843	10	FSM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	0	171	0	-171	multi-exon	FALSE	canonical	3	178	junction_8	16.2890556304942	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATTATTATTATTATT	NA	False	NA	NA	False	NA	NA	NA	77971209	77964372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
ENSMUSG00000020840.11_76836565_76878205_1	chr11	+	2081	12	NNC	ENSMUSG00000020840.11	novel	2497	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	205.538036133268	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGCCGGCGTGTCTGGTC	NA	False	NA	30	True	AATAAA	-19	NA	76836564	76878205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_76836720_76837067_76837085_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ENSMUSG00000020840.11_76836565_76878205_2	chr11	+	2262	12	FSM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	235	0	0	0	multi-exon	FALSE	canonical	3	631	junction_4	56.5853410915431	2539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGCCGGCGTGTCTGGTC	NA	False	NA	30	True	AATAAA	-19	NA	76836564	76878205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ENSMUSG00000020843.16_76297778_76305398_1	chr11	+	989	4	FSM	ENSMUSG00000020843.16	ENSMUST00000120699.8	746	4	0	-243	0	243	multi-exon	FALSE	canonical	3	7	junction_1	120.856204731996	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTTAGTATCTTTGCT	NA	False	NA	17	True	AGTAAA	-27	NA	76297777	76305398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_76297970_76300467_76300665_76301952_76302026_76304871
ENSMUSG00000020843.16_76297778_76305398_2	chr11	+	1288	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	-191	1720	0	243	multi-exon	FALSE	canonical	3	248	junction_1	9.62635271879577	1199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTTAGTATCTTTGCT	NA	False	NA	17	True	AGTAAA	-27	NA	76297777	76305398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
ENSMUSG00000020843.16_76298017_76305207_1	chr11	+	858	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	48	1911	0	52	multi-exon	FALSE	canonical	3	248	junction_1	9.62635271879577	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGGACTGTTACGCAT	NA	False	NA	3	True	AGTAAA	-15	NA	76298016	76305207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
ENSMUSG00000020843.16_76298017_76305207_2	chr11	+	661	3	FSM	ENSMUSG00000020843.16	ENSMUST00000152183.2	362	3	0	-299	0	52	multi-exon	FALSE	canonical	3	21	junction_1	125	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGGACTGTTACGCAT	NA	False	NA	3	True	AGTAAA	-15	NA	76298016	76305207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_76298269_76301952_76302026_76304871
ENSMUSG00000020843.16_76298017_76305398_1	chr11	+	1049	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	48	1720	0	243	multi-exon	FALSE	canonical	3	248	junction_1	9.62635271879577	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTTAGTATCTTTGCT	NA	False	NA	17	True	AGTAAA	-27	NA	76298016	76305398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
ENSMUSG00000020843.16_76298017_76305398_2	chr11	+	852	3	FSM	ENSMUSG00000020843.16	ENSMUST00000152183.2	362	3	0	-490	0	243	multi-exon	FALSE	canonical	3	21	junction_1	125	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTTAGTATCTTTGCT	NA	False	NA	17	True	AGTAAA	-27	NA	76298016	76305398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_76298269_76301952_76302026_76304871
ENSMUSG00000020844.7_76148784_76178199_1	chr11	-	1723	8	NNC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	111695	-760	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	32.3412922387691	183	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTACTGTGTGCTTAGTT	1423	False	NA	-5	True	NA	NA	NA	76178199	76148783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76178031
ENSMUSG00000020849.14_75623739_75656404_1	chr11	+	1789	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	44	267	0	-267	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	24207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCATGCCTCCATCCTT	3035	False	NA	16	True	NA	NA	NA	75623738	75656404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ENSMUSG00000020849.14_75623739_75656404_2	chr11	+	1784	6	NNC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	0	-267	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4203.75149598546	24106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCATGCCTCCATCCTT	3035	False	NA	16	True	NA	NA	NA	75623738	75656404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_75623918_75642706_75642907_75646399_75646507_75647647_75647850_75650117_75650255_75655445
ENSMUSG00000020849.14_75623787_75656455_1	chr11	+	1792	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	92	216	0	-216	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	23835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTGACAGTATTGTTT	3083	False	NA	14	True	AATAAA	-15	NA	75623786	75656455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ENSMUSG00000020857.12_93840643_93846702_1	chr11	-	621	5	NNC	ENSMUSG00000020857.12	novel	1012	5	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2819.82964911003	56645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGCAGTGTTCAGTAC	NA	False	NA	-31	True	NA	NA	NA	93846702	93840642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_93840873_93842725_93842830_93843621_93843728_93846320_93846451_93846651
ENSMUSG00000020857.12_93840643_93846702_2	chr11	-	626	5	FSM	ENSMUSG00000020857.12	ENSMUST00000021217.11	1012	5	383	3	-93	0	multi-exon	FALSE	canonical	3	5665	junction_4	866.911327645452	67826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGCAGTGTTCAGTAC	NA	False	NA	-31	True	NA	NA	NA	93846702	93840642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93846451_93846651
ENSMUSG00000020863.16_94181965_94212784_1	chr11	-	1937	11	NNC	ENSMUSG00000020863.16	novel	2050	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	78.8542960148653	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGATTGTCTGTGTCAT	NA	False	NA	-5	True	AATAAA	-23	NA	94212784	94181964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_94182405_94183910_94184100_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ENSMUSG00000020869.9_94520764_94536042_1	chr11	+	2666	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	171	0	124	0	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	27	True	ATTAAA	-18	NA	94520763	94536042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
ENSMUSG00000020869.9_94532107_94534704_1	chr11	+	698	2	ISM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	11514	1338	11467	-1338	3prime_fragment	FALSE	canonical	3	2480	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTGTATGTCATAAAC	NA	False	NA	-8	True	ACTAAA	-23	NA	94532106	94534704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_94532220_94534119
ENSMUSG00000020869.9_94535822_94544550_1	chr11	+	2261	10	NNC	ENSMUSG00000020869.9	novel	2837	7	NA	NA	15182	8508	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	806	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCGCAAGACCCGGAAGTA	NA	False	NA	NA	False	NA	NA	NA	94535821	94544550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540288_94540346_94540833_94540965_94541048_94541850_94544521
ENSMUSG00000020869.9_94535822_94544550_2	chr11	+	2204	9	NIC	ENSMUSG00000020869.9	novel	2837	7	NA	NA	15182	8508	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCGCAAGACCCGGAAGTA	NA	False	NA	NA	False	NA	NA	NA	94535821	94544550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541850_94544521
ENSMUSG00000020873.16_95275732_95282602_1	chr11	+	1890	8	NIC	ENSMUSG00000020873.16	novel	1523	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	260	junction_3	11.771636613973	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGACCCTGCTGCTGC	NA	False	NA	21	True	AATAAA	-22	NA	95275731	95282602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_95275940_95276626_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ENSMUSG00000020873.16_95275732_95282602_2	chr11	+	1309	9	FSM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	214	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	19.5923294939627	1759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGACCCTGCTGCTGC	NA	False	NA	21	True	AATAAA	-22	NA	95275731	95282602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_95275940_95276626_95276731_95277311_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ENSMUSG00000020873.16_95275732_95282602_3	chr11	+	1266	8	NNC	ENSMUSG00000020873.16	novel	1299	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	116.229716246645	1606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGACCCTGCTGCTGC	NA	False	NA	21	True	AATAAA	-22	NA	95275731	95282602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_95275940_95276626_95276731_95277336_95277456_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ENSMUSG00000020877.12_96920960_96924786_1	chr11	+	1453	8	NNC	ENSMUSG00000020877.12	novel	826	3	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	41.1958983494271	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATCTCAAGTCTATTGA	NA	False	NA	19	True	AATAAA	-25	NA	96920959	96924786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_96920999_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
ENSMUSG00000020888.17_69891421_69898970_1	chr11	+	1594	12	ISM	ENSMUSG00000020888.17	ENSMUST00000019362.15	2968	15	0	1967	0	75	5prime_fragment	FALSE	canonical	3	488	junction_4	33.8940985623659	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGGTATTCCCAGGCC	7135	False	NA	NA	False	NA	NA	NA	69891420	69898970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845
ENSMUSG00000020888.17_69891647_69898970_1	chr11	+	1368	12	ISM	ENSMUSG00000020888.17	ENSMUST00000019362.15	2968	15	226	1967	0	75	5prime_fragment	FALSE	canonical	3	488	junction_4	33.8940985623659	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGGTATTCCCAGGCC	7361	False	NA	NA	False	NA	NA	NA	69891646	69898970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845
ENSMUSG00000020888.17_69891647_69900937_1	chr11	+	2742	15	FSM	ENSMUSG00000020888.17	ENSMUST00000019362.15	2968	15	226	0	0	0	multi-exon	FALSE	canonical	3	488	junction_4	30.5160546571265	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAAGCCTCTGGCTCC	7361	False	NA	12	True	AATAAA	-16	NA	69891646	69900937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
ENSMUSG00000020892.11_69024968_69039941_1	chr11	+	1433	7	ISM	ENSMUSG00000020892.11	ENSMUST00000021268.9	3019	15	8246	0	0	0	3prime_fragment	FALSE	canonical	2	6	junction_1	2.58198889747161	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTGTTTTGATGATG	4061	False	NA	21	True	AATAAA	-22	NA	69024967	69039941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_69025194_69025282_69025370_69025831_69026002_69026697_69026820_69033011_69033113_69033672_69033844_69039385
ENSMUSG00000020893.18_68989774_68994906_1	chr11	+	1979	15	ISM	ENSMUSG00000020893.18	ENSMUST00000021271.14	4671	23	0	5880	0	-2216	5prime_fragment	FALSE	canonical	3	10	junction_1	4.89116237593428	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGAGGTGGCCCCAGT	NA	False	NA	NA	False	NA	NA	NA	68989773	68994906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_68989835_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994084_68994178_68994288_68994374_68994507_68994667_68994774_68994856
ENSMUSG00000020895.15_68961637_68963856_2	chr11	+	753	5	NNC	ENSMUSG00000020895.15	novel	779	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	158.914088425161	1071	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCGTATACTATTTTT	4652	False	NA	NA	False	AATAAA	-19	NA	68961636	68963856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963325_68963571
ENSMUSG00000020895.15_68961637_68963856_3	chr11	+	964	4	NIC	ENSMUSG00000020895.15	novel	779	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	348	junction_3	26.9814751264641	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCGTATACTATTTTT	4652	False	NA	NA	False	AATAAA	-19	NA	68961636	68963856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_68962118_68962199_68962301_68963248_68963346_68963571
ENSMUSG00000020895.15_68961762_68963856_1	chr11	+	628	5	NNC	ENSMUSG00000020895.15	novel	779	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	158.914088425161	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCGTATACTATTTTT	4777	False	NA	NA	False	AATAAA	-19	NA	68961761	68963856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963325_68963571
ENSMUSG00000020895.15_68961762_68963856_2	chr11	+	649	5	FSM	ENSMUSG00000020895.15	ENSMUST00000075980.12	779	5	130	0	0	0	multi-exon	FALSE	canonical	3	348	junction_4	23.6893963620857	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCGTATACTATTTTT	4777	False	NA	NA	False	AATAAA	-19	NA	68961761	68963856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963346_68963571
ENSMUSG00000020897.13_68936473_68942490_1	chr11	+	1757	9	NNC	ENSMUSG00000020897.13	novel	1831	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	184.266790279746	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGTGGTCTGAATAT	NA	False	NA	16	True	AATAAA	-26	NA	68936472	68942490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_68936497_68936694_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ENSMUSG00000020897.13_68936497_68942490_1	chr11	+	1990	8	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_1	225.027889427973	1802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGTGGTCTGAATAT	NA	False	NA	16	True	AATAAA	-26	NA	68936496	68942490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_68936835_68938551_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ENSMUSG00000020899.17_68882528_68899277_1	chr11	-	2609	20	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	9	6005	0	-981	5prime_fragment	FALSE	canonical	3	373	junction_19	35.1071963485702	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCTGGTGGGAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	68899277	68882527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ENSMUSG00000020903.14_67857316_68094705_1	chr11	+	828	8	FSM	ENSMUSG00000020903.14	ENSMUST00000021285.14	4394	8	297	3269	0	109	multi-exon	FALSE	canonical	3	260	junction_1	20.1626043021455	1523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGTGTACCTTGTTT	NA	False	NA	17	True	AATAAA	-17	NA	67857315	68094705	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67902140_67902266_67911731_67911825_68000102_68000205_68094531
ENSMUSG00000020903.14_67857316_68094705_2	chr11	+	735	7	NIC	ENSMUSG00000020903.14	novel	4394	8	NA	NA	0	109	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	113.719928870107	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGTGTACCTTGTTT	NA	False	NA	17	True	AATAAA	-17	NA	67857315	68094705	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67902140_67902266_68000102_68000205_68094531
ENSMUSG00000020910.17_66928731_66943438_1	chr11	-	1461	5	FSM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	-42	-136	-18	0	multi-exon	FALSE	canonical	3	79	junction_4	11.1579568022107	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCATGTGGGCATATAC	NA	False	NA	NA	False	AATAAA	-10	NA	66943438	66928730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_66929272_66931044_66931162_66932306_66932934_66942506_66942605_66943360
ENSMUSG00000020910.17_66928731_66943438_2	chr11	-	1363	4	NIC	ENSMUSG00000020910.17	novel	1531	5	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	43.2229362980145	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCATGTGGGCATATAC	NA	False	NA	NA	False	AATAAA	-10	NA	66943438	66928730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_66929272_66931044_66931162_66932306_66932934_66943360
ENSMUSG00000020910.17_66928867_66943438_1	chr11	-	1413	5	FSM	ENSMUSG00000020910.17	ENSMUST00000146338.8	1531	5	-18	136	-18	0	multi-exon	FALSE	canonical	2	5	junction_2	39.9710832978042	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCTGTTTGTGTACAAA	NA	False	NA	2	True	CATAAA	-28	NA	66943438	66928866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_66929272_66931044_66931162_66932218_66932934_66942506_66942605_66943360
ENSMUSG00000020910.17_66928867_66943438_2	chr11	-	2470	4	NIC	ENSMUSG00000020910.17	novel	1283	5	NA	NA	-18	0	intron_retention	FALSE	canonical	3	79	junction_3	12.2474487139159	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCTGTTTGTGTACAAA	NA	False	NA	2	True	CATAAA	-28	NA	66943438	66928866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_66929272_66931044_66932934_66942506_66942605_66943360
ENSMUSG00000020910.17_66928867_66943438_3	chr11	-	1227	4	NIC	ENSMUSG00000020910.17	novel	1283	5	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	43.2229362980145	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCTGTTTGTGTACAAA	NA	False	NA	2	True	CATAAA	-28	NA	66943438	66928866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_66929272_66931044_66931162_66932306_66932934_66943360
ENSMUSG00000020914.18_98883769_98915016_1	chr11	-	5572	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1094	junction_3	172.605656925746	1867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCCTCTTATTTTAAC	NA	False	NA	0	True	AATAAA	-22	NA	98915016	98883768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ENSMUSG00000020917.18_100367182_100385025_1	chr11	-	2371	13	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_12	1050.92835943592	818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	1749	False	NA	-17	True	AATAAA	-15	NA	100385025	100367181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100384973
ENSMUSG00000020917.18_100367182_100418695_1	chr11	-	4287	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	740.547261769011	2838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418695	100367181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395003_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ENSMUSG00000020918.15_100595572_100603275_1	chr11	-	2102	14	NNC	ENSMUSG00000020918.15	novel	3046	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	174.969819882809	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	6795	False	NA	-1	True	AATAAA	-18	NA	100603275	100595571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100600316_100601270_100601408_100603237
ENSMUSG00000020921.7_102043707_102047183_1	chr11	-	1192	4	FSM	ENSMUSG00000020921.7	ENSMUST00000021296.7	1574	4	47	335	-2	-335	multi-exon	FALSE	canonical	3	250	junction_3	22.1710521977545	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTGTGTGTGTGTGTG	4512	False	NA	NA	False	ACTAAA	-15	NA	102047183	102043706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102044421_102045382_102045530_102046549_102046731_102047033
ENSMUSG00000020922.12_102053323_102076055_1	chr11	-	1377	6	NNC	ENSMUSG00000020922.12	novel	2256	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	382.999216709382	1941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTCAGGTTTGTGC	6423	False	NA	-1	True	AATAAA	-23	NA	102076055	102053322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_102053469_102054280_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
ENSMUSG00000020922.12_102053323_102076100_1	chr11	-	1394	6	NNC	ENSMUSG00000020922.12	novel	2256	5	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	382.999216709382	1934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTCAGGTTTGTGC	6378	False	NA	-1	True	AATAAA	-23	NA	102076100	102053322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_102053470_102054309_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
ENSMUSG00000020922.12_102054778_102076055_1	chr11	-	734	5	FSM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	67	1455	0	0	multi-exon	FALSE	canonical	3	919	junction_1	21.856063231973	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTTCAAAAAAAAAAACCTA	6423	False	NA	-112	True	NA	NA	NA	102076055	102054777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
ENSMUSG00000020925.17_102575512_102588560_1	chr11	-	2259	4	FSM	ENSMUSG00000020925.17	ENSMUST00000124869.8	407	4	-198	-1654	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	267.304237818175	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTCTGTCTTGTTCTTT	NA	False	NA	-4	True	AATAAA	-16	NA	102588560	102575511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102577323_102581026_102581163_102582936_102583025_102588336
ENSMUSG00000020925.17_102575512_102588560_3	chr11	-	2315	5	NNC	ENSMUSG00000020925.17	novel	2366	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	239.593405585379	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTCTGTCTTGTTCTTT	NA	False	NA	-4	True	AATAAA	-16	NA	102588560	102575511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_102577323_102579626_102579681_102581024_102581163_102582936_102583025_102588336
ENSMUSG00000020925.17_102576157_102588560_1	chr11	-	1673	5	FSM	ENSMUSG00000020925.17	ENSMUST00000164506.3	2316	5	0	643	0	-643	multi-exon	FALSE	non_canonical	0	0	junction_2	239.593405585379	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTGTTAGGCTGAA	NA	False	NA	1	True	NA	NA	NA	102588560	102576156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102577323_102579626_102579688_102581028_102581163_102582936_102583025_102588336
ENSMUSG00000020925.17_102579145_102588560_1	chr11	-	986	4	NNC	ENSMUSG00000020925.17	novel	989	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	267.304237818175	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGCTTCTTGTTGGGT	NA	False	NA	NA	False	NA	NA	NA	102588560	102579144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_102579681_102581024_102581163_102582936_102583025_102588336
ENSMUSG00000020929.15_102731997_102771772_1	chr11	-	2399	23	ISM	ENSMUSG00000020929.15	ENSMUST00000107060.8	3339	28	39	2698	-11	-960	5prime_fragment	FALSE	non_canonical	0	0	junction_21	311.818635700703	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTCCACCTTCAACCC	8487	False	NA	NA	False	NA	NA	NA	102771772	102731996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762009_102768435_102768545_102771720
ENSMUSG00000020935.9_102884873_102907994_1	chr11	-	1738	5	NNC	ENSMUSG00000020935.9	novel	1744	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	487.729625407356	3924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAATTCCACTTGGCCT	8193	False	NA	-5	True	NA	NA	NA	102907994	102884872	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891173_102907871
ENSMUSG00000020935.9_102885141_102907994_1	chr11	-	1476	5	FSM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	0	268	0	-266	multi-exon	FALSE	canonical	3	1121	junction_2	32.0965340808007	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTACCTCTGTGCCTTCCC	8193	False	NA	NA	False	NA	NA	NA	102907994	102885140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891183_102907875
ENSMUSG00000020936.9_102919411_102956931_1	chr11	+	1815	12	FSM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	239	2807	0	-2807	multi-exon	FALSE	canonical	3	928	junction_6	43.300411312535	3173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAATATTCTAAATATCT	NA	False	NA	14	True	AATAAA	-20	NA	102919410	102956931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ENSMUSG00000020936.9_102919411_102956931_2	chr11	+	1814	12	NNC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	0	-2807	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	392.747453185213	3175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAATATTCTAAATATCT	NA	False	NA	14	True	AATAAA	-20	NA	102919410	102956931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948195_102948362_102949030_102949144_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ENSMUSG00000020936.9_102919411_102959738_1	chr11	+	4622	12	FSM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	239	0	0	0	multi-exon	FALSE	canonical	3	928	junction_6	43.300411312535	3321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCCTGGTGTTCTT	NA	False	NA	9	True	AATAAA	-16	NA	102919410	102959738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ENSMUSG00000020946.14_103567675_103588524_1	chr11	-	2925	5	FSM	ENSMUSG00000020946.14	ENSMUST00000107013.3	1044	5	-4	-1877	0	0	multi-exon	TRUE	canonical	3	79	junction_1	134.545531326759	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGGCATTCTTTGTCT	NA	False	NA	2	True	AATAAA	-31	NA	103588524	103567674	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_103570224_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ENSMUSG00000020946.14_103568956_103588524_1	chr11	-	1785	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	200	1281	0	596	multi-exon	FALSE	canonical	3	264	junction_1	54.6867442804927	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTAAATTTAGTAGCCT	NA	False	NA	NA	False	NA	NA	NA	103588524	103568955	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ENSMUSG00000020946.14_103569920_103588524_1	chr11	-	821	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	200	2245	0	-161	multi-exon	FALSE	canonical	3	264	junction_1	54.6867442804927	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTTGTTTTCTGTGAC	NA	False	NA	-2	True	NA	NA	NA	103588524	103569919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ENSMUSG00000020946.14_103569920_103588524_2	chr11	-	680	5	FSM	ENSMUSG00000020946.14	ENSMUST00000107013.3	1044	5	-4	368	0	-161	multi-exon	FALSE	canonical	3	79	junction_1	134.545531326759	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTTGTTTTCTGTGAC	NA	False	NA	-2	True	NA	NA	NA	103588524	103569919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_103570224_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ENSMUSG00000020955.10_51738053_51785715_1	chr12	+	790	5	NIC	ENSMUSG00000020955.10	novel	1035	6	NA	NA	233	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	28.6749019178793	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGACGTTTGAGTGAA	NA	False	NA	NA	False	AATAAA	-17	NA	51738052	51785715	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_51738098_51763724_51763934_51767418_51767506_51769762_51769832_51785335
ENSMUSG00000020955.10_51790505_51797160_1	chr12	+	2071	7	Genic_Genomic	ENSMUSG00000020955.10	novel	757	6	NA	NA	52685	5591	multi-exon	FALSE	non_canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGAAACTCAGCCGCCA	NA	False	NA	NA	False	NA	NA	NA	51790504	51797160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr12_+_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103
ENSMUSG00000020956.15_52045683_52053284_1	chr12	-	1171	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	0	1393	0	-1393	multi-exon	FALSE	canonical	3	170	junction_1	5	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTTTTTCTTAAAGCC	NA	False	NA	3	True	AATAAA	-20	NA	52053284	52045682	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_52046657_52051661_52051732_52053157
ENSMUSG00000020956.15_52045964_52053284_1	chr12	-	890	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	0	1674	0	-1674	multi-exon	FALSE	canonical	3	170	junction_1	5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACTTTTCAAAGTGAAGA	NA	False	NA	NA	False	NA	NA	NA	52053284	52045963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_52046657_52051661_52051732_52053157
ENSMUSG00000020961.16_91606055_91652864_1	chr12	-	2703	4	NIC	ENSMUSG00000020961.16	novel	9896	7	NA	NA	27884	2262	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	9.7410927974683	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTCTGGGCCTGCTTTT	NA	False	NA	4	True	TATAAA	-23	NA	91652864	91606054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_91606580_91608494_91608698_91614005_91615845_91652728
ENSMUSG00000020962.15_91526228_91556814_1	chr12	-	1903	9	FSM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	-31	4192	-31	-766	multi-exon	FALSE	canonical	3	931	junction_7	74.7277349783867	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTGTCTATATTTGT	1214	False	NA	NA	False	AATACA	-28	NA	91556814	91526227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
ENSMUSG00000020974.7_69248547_69274958_1	chr12	-	1689	19	NNC	ENSMUSG00000020974.7	novel	1706	19	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	100.520451208255	1117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTACACATTGTAGTTT	NA	False	NA	-5	True	AATAAA	-20	NA	69274958	69248546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69259812_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ENSMUSG00000020986.14_59005575_59058803_1	chr12	-	3703	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	0	406	0	-406	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGTTATTTTAAAATC	2678	False	NA	-9	True	AATAAA	-18	NA	59058803	59005574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ENSMUSG00000020988.10_69767996_69771647_1	chr12	-	578	3	ISM	ENSMUSG00000020988.10	ENSMUST00000021370.10	3340	10	0	30789	0	-8501	5prime_fragment	FALSE	canonical	3	564	junction_2	31.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTGCCTATGTAATT	NA	False	NA	NA	False	AAAAAG	-15	NA	69771647	69767995	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_69768238_69768851_69768968_69771427
ENSMUSG00000020994.6_59113708_59116981_1	chr12	+	633	7	ISM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	38	3803	0	1020	5prime_fragment	FALSE	canonical	3	479	junction_6	28.2159332450459	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGCAGGTTGAAAACGA	NA	False	NA	NA	False	AAGAAA	-36	NA	59113707	59116981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927
ENSMUSG00000020994.6_59113708_59119844_1	chr12	+	2507	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	38	940	0	-940	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGTCATCTTTTTTAA	NA	False	NA	2	True	AATAAA	-13	NA	59113707	59119844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ENSMUSG00000020994.6_59113750_59119980_1	chr12	+	2601	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	80	804	0	-804	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGGATGTCCTTGTTG	NA	False	NA	17	True	AATAAA	-17	NA	59113749	59119980	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ENSMUSG00000020994.6_59113750_59120641_1	chr12	+	3262	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	80	143	0	-143	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGTTTAAAATTAGTAC	NA	False	NA	10	True	AATAAA	-16	NA	59113749	59120641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ENSMUSG00000021003.11_98168553_98225611_1	chr12	-	3725	17	FSM	ENSMUSG00000021003.11	ENSMUST00000021390.9	3832	17	107	0	-5	0	multi-exon	FALSE	canonical	3	22	junction_3	6.15648793956424	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGAATTTGCATTTG	NA	False	NA	NA	False	NA	NA	NA	98225611	98168552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225393
ENSMUSG00000021018.9_20536580_20541017_1	chr16	+	785	5	FSM	ENSMUSG00000021018.9	ENSMUST00000021405.8	950	5	165	0	0	0	multi-exon	FALSE	canonical	3	628	junction_4	109.533955922353	6124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTCCATTGTCATTGC	1069	False	NA	15	True	ATTAAA	-16	NA	20536579	20541017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20539268_20539353_20540659
ENSMUSG00000021022.10_55328296_55349783_1	chr12	-	1815	13	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	0	2520	0	-2520	intron_retention	FALSE	canonical	3	216	junction_9	34.6025047262959	751	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACAGCAAATATCTTGC	NA	False	NA	NA	False	AATAAA	-19	NA	55349783	55328295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378
ENSMUSG00000021022.10_55328296_55349783_3	chr12	-	1678	14	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	0	-2520	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_13	69.7240545793362	755	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACAGCAAATATCTTGC	NA	False	NA	NA	False	AATAAA	-19	NA	55349783	55328295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349717
ENSMUSG00000021023.15_55328296_55349783_1	chr12	+	1696	14	NIC	ENSMUSG00000021023.15	novel	3122	7	NA	NA	-18066	-4591	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCACAGGTTACGGGACT	NA	False	NA	NA	False	NA	NA	NA	55328295	55349783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349699
ENSMUSG00000021023.15_55423977_55429281_2	chr12	+	526	3	NNC	ENSMUSG00000021023.15	novel	3122	7	NA	NA	73906	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	210.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTAGTTGGTTTTGCA	NA	False	NA	19	True	AATAAA	-20	NA	55423976	55429281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_55424067_55426066_55426263_55429041
ENSMUSG00000021023.15_55424574_55429281_1	chr12	+	602	3	NNC	ENSMUSG00000021023.15	novel	888	7	NA	NA	74503	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	211.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTAGTTGGTTTTGCA	NA	False	NA	19	True	AATAAA	-20	NA	55424573	55429281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_55424740_55426066_55426263_55429041
ENSMUSG00000021024.15_55445580_55465239_1	chr12	+	1015	7	NNC	ENSMUSG00000021024.15	novel	1042	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	989.167958437797	11703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGGTGCATCCTGTCTTT	NA	False	NA	16	True	AATAAA	-17	NA	55445579	55465239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_55445777_55454253_55454349_55454786_55454869_55456918_55457068_55458971_55459151_55461188_55461284_55465021
ENSMUSG00000021028.9_56375088_56392611_1	chr12	-	1498	9	NIC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	97.3735558301123	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGTCTTTTTTACTGT	NA	False	NA	NA	False	AATAAA	-33	NA	56392611	56375087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389195_56392456
ENSMUSG00000021028.9_56375088_56392679_1	chr12	-	1507	9	NNC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	103.134317760869	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGTCTTTTTTACTGT	NA	False	NA	NA	False	AATAAA	-33	NA	56392679	56375087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_56375585_56377013_56377053_56382582_56382672_56384083_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
ENSMUSG00000021033.12_87194492_87211098_1	chr12	+	1257	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	0	399	0	0	multi-exon	FALSE	canonical	3	449	junction_5	40.5555175037873	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTTCGATATATCTTCC	NA	False	NA	16	True	ATTAAA	-21	NA	87194491	87211098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUSG00000021033.12_87194492_87211258_1	chr12	+	1417	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	0	239	0	160	multi-exon	FALSE	canonical	3	449	junction_5	40.5555175037873	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGCCTTTATAAATGTC	NA	False	NA	NA	False	NA	NA	NA	87194491	87211258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUSG00000021033.12_87204382_87211497_1	chr12	+	1582	9	FSM	ENSMUSG00000021033.12	ENSMUST00000222222.2	724	9	0	-858	0	0	multi-exon	FALSE	canonical	3	69	junction_1	142.509429512576	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTGTCATGGACAA	3847	False	NA	13	True	NA	NA	NA	87204381	87211497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_87204435_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUSG00000021036.11_87356413_87359975_1	chr12	-	886	2	ISM	ENSMUSG00000021036.11	ENSMUST00000170720.2	704	4	15412	0	15412	0	3prime_fragment	FALSE	canonical	3	597	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTATTCTACTTGTGAA	9050	False	NA	-11	True	ATTAAA	-14	NA	87359975	87356412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_87356795_87359471
ENSMUSG00000021036.11_87356413_87360009_1	chr12	-	920	2	ISM	ENSMUSG00000021036.11	ENSMUST00000170720.2	704	4	15378	0	15378	0	3prime_fragment	FALSE	canonical	3	597	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTATTCTACTTGTGAA	9016	False	NA	-11	True	ATTAAA	-14	NA	87360009	87356412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_87356795_87359471
ENSMUSG00000021036.11_87356413_87435015_1	chr12	-	2015	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	114	4581	0	0	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTATTCTACTTGTGAA	8810	False	NA	-11	True	ATTAAA	-14	NA	87435015	87356412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ENSMUSG00000021036.11_87356413_87435129_1	chr12	-	2129	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	0	4581	0	0	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTATTCTACTTGTGAA	8696	False	NA	-11	True	ATTAAA	-14	NA	87435129	87356412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ENSMUSG00000021037.8_87313484_87320754_1	chr12	+	1361	9	NNC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	244	junction_3	909.82889016287	8052	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTCTTACAATCTATG	NA	False	NA	-1	True	AGTAAA	-17	NA	87313483	87320754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_87313696_87314928_87315120_87316648_87316732_87317115_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ENSMUSG00000021037.8_87313632_87320754_1	chr12	+	1218	9	FSM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	160	-1	148	1	multi-exon	FALSE	canonical	3	2699	junction_7	143.152890295656	5464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTCTTACAATCTATG	NA	False	NA	-1	True	AGTAAA	-17	NA	87313631	87320754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ENSMUSG00000021039.10_87490682_87496694_1	chr12	-	403	4	Fusion	ENSMUSG00000079036.11_ENSMUSG00000021039.10	novel	2232	14	NA	NA	4233	-401	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15074	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCCTGGAGTCGTGACC	NA	False	NA	NA	False	AATGAA	-3	NA	87496694	87490681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr12_-_87490797_87494333_87494393_87496062_87496171_87496573
ENSMUSG00000021040.16_87490682_87496694_3	chr12	+	380	3	NNC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1832.5	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTTTATTTGAAATGAGG	NA	False	NA	36	True	AATAAA	-23	NA	87490681	87496694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_87490833_87496062_87496171_87496573
ENSMUSG00000021040.16_87490682_87496694_4	chr12	+	391	3	NNC	ENSMUSG00000021040.16	novel	362	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1832.5	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTTTATTTGAAATGAGG	NA	False	NA	36	True	AATAAA	-23	NA	87490681	87496694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_87490801_87496019_87496171_87496573
ENSMUSG00000021040.16_87490682_87496694_5	chr12	+	372	3	NNC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1832.5	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTTTATTTGAAATGAGG	NA	False	NA	36	True	AATAAA	-23	NA	87490681	87496694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_87490825_87496062_87496171_87496573
ENSMUSG00000021040.16_87490682_87496694_6	chr12	+	398	4	NNC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1689.0546336799	9504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTTTATTTGAAATGAGG	NA	False	NA	36	True	AATAAA	-23	NA	87490681	87496694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_87490797_87494338_87494393_87496062_87496171_87496573
ENSMUSG00000021040.16_87496680_87519049_1	chr12	+	1770	13	NNC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	5964	20073	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGGCCACAACGTCGCC	NA	False	NA	NA	False	NA	NA	NA	87496679	87519049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_87497184_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ENSMUSG00000021040.16_87496680_87519049_2	chr12	+	1859	14	NNC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	5964	20073	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	846	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGGCCACAACGTCGCC	NA	False	NA	NA	False	NA	NA	NA	87496679	87519049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_87497148_87497614_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ENSMUSG00000021040.16_87497033_87519049_1	chr12	+	1815	15	NNC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	6317	20073	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGGCCACAACGTCGCC	NA	False	NA	NA	False	NA	NA	NA	87497032	87519049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_87497158_87497226_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ENSMUSG00000021040.16_87497033_87519049_2	chr12	+	1884	14	NIC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	6317	20073	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGGCCACAACGTCGCC	NA	False	NA	NA	False	NA	NA	NA	87497032	87519049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ENSMUSG00000021044.16_88327324_88335961_1	chr12	+	1087	2	ISM	ENSMUSG00000021044.16	ENSMUST00000222695.2	2253	11	-94	92529	0	-2199	5prime_fragment	FALSE	canonical	3	17	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTGTGAATGTTC	NA	False	NA	NA	False	NA	NA	NA	88327323	88335961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_88327554_88335104
ENSMUSG00000021044.16_88327418_88335961_1	chr12	+	993	2	ISM	ENSMUSG00000021044.16	ENSMUST00000222695.2	2253	11	0	92529	0	-2199	5prime_fragment	FALSE	canonical	3	17	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTGTGAATGTTC	NA	False	NA	NA	False	NA	NA	NA	88327417	88335961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_88327554_88335104
ENSMUSG00000021048.8_76302187_76366577_1	chr12	+	3120	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	278.235888908213	2723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	8026	False	NA	9	True	AATAAA	-17	NA	76302186	76366577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348037_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ENSMUSG00000021048.8_76302187_76366577_2	chr12	+	3126	28	FSM	ENSMUSG00000021048.8	ENSMUST00000021443.7	3241	28	115	0	0	0	multi-exon	FALSE	canonical	3	837	junction_20	135.484134190258	2725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	8026	False	NA	9	True	AATAAA	-17	NA	76302186	76366577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ENSMUSG00000021056.9_76245460_76263755_1	chr12	-	774	4	NIC	ENSMUSG00000021056.9	novel	2137	10	NA	NA	12483	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	11.0855260988773	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTCTCTCCTGTGCTTG	1129	False	NA	NA	False	AATAAA	-24	NA	76263755	76245459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_76245726_76259148_76259332_76261186_76261493_76263736
ENSMUSG00000021065.17_77284899_77522763_1	chr12	+	2895	12	FSM	ENSMUSG00000021065.17	ENSMUST00000171770.10	2765	12	-23	-107	0	0	multi-exon	FALSE	canonical	3	35	junction_1	20.7412233753807	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGAAGTTTCTGGAAT	NA	False	NA	13	True	AATAAA	-14	NA	77284898	77522763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_77284974_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ENSMUSG00000021072.13_70499869_70514398_1	chr12	+	2379	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	0	416	0	-416	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGTTGAAGAGAAGTTT	NA	False	NA	12	True	AATAAA	-18	NA	70499868	70514398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ENSMUSG00000021076.7_70984689_71008835_1	chr12	+	1307	13	FSM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	58	2657	0	0	multi-exon	FALSE	canonical	3	306	junction_4	23.8006769278149	1800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCTTGCTTATTTCAA	9703	False	NA	NA	False	AATAAA	-13	NA	70984688	71008835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
ENSMUSG00000021076.7_70984689_71008977_1	chr12	+	1449	13	FSM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	58	2515	0	142	multi-exon	FALSE	canonical	3	306	junction_4	23.8006769278149	2340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCTTGTGTCGTAT	9703	False	NA	4	True	NA	NA	NA	70984688	71008977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
ENSMUSG00000021076.7_70984689_71009828_1	chr12	+	2078	14	NNC	ENSMUSG00000021076.7	novel	4022	13	NA	NA	0	993	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	94.5177106850144	2542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGCTCTTGTGCTTTCT	9703	False	NA	NA	False	AATAAA	-21	NA	70984688	71009828	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640_71009566_71009787
ENSMUSG00000021078.6_71169947_71183447_1	chr12	+	880	5	NIC	ENSMUSG00000021078.6	novel	578	5	NA	NA	11703	13452	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGGCAGTGATGTCAAG	NA	False	NA	NA	False	NA	NA	NA	71169946	71183447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_71170461_71172235_71172332_71173106_71173172_71178774_71178861_71183328
ENSMUSG00000021078.6_71169947_71183447_2	chr12	+	1016	6	NIC	ENSMUSG00000021078.6	novel	578	5	NA	NA	11703	13452	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGGCAGTGATGTCAAG	NA	False	NA	NA	False	NA	NA	NA	71169946	71183447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_71170461_71172235_71172332_71173106_71173172_71178774_71178861_71179280_71179417_71183328
ENSMUSG00000021079.17_71169947_71183447_1	chr12	-	978	6	NNC	ENSMUSG00000021079.17	novel	990	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	124.393890525218	1557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTGTCTTTACTGTAT	NA	False	NA	-18	True	AATAAA	-13	NA	71183447	71169946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_71170461_71172235_71172332_71173106_71173172_71178774_71178861_71180673_71180772_71183328
ENSMUSG00000021079.17_71169947_71183447_2	chr12	-	875	5	NNC	ENSMUSG00000021079.17	novel	794	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	120.575702361628	2157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTGTCTTTACTGTAT	NA	False	NA	-18	True	AATAAA	-13	NA	71183447	71169946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_71170461_71172235_71172332_71173106_71173172_71178774_71178856_71183328
ENSMUSG00000021079.17_71169947_71183447_3	chr12	-	880	5	NNC	ENSMUSG00000021079.17	novel	794	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	120.575702361628	2183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTGTCTTTACTGTAT	NA	False	NA	-18	True	AATAAA	-13	NA	71183447	71169946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_71170461_71172235_71172332_71173106_71173172_71178774_71178856_71183323
ENSMUSG00000021094.11_72697184_72711580_1	chr12	-	1225	7	FSM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	103	57	0	0	multi-exon	FALSE	canonical	3	103	junction_1	5.61990510002912	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTTGTACAAGAGC	NA	False	NA	-14	True	AATAAA	-18	NA	72711580	72697183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_72697392_72699008_72699225_72699874_72699998_72703073_72703314_72704101_72704209_72706117_72706271_72711402
ENSMUSG00000021098.15_72959825_72964634_2	chr12	-	540	5	ISM	ENSMUSG00000021098.15	ENSMUST00000131033.8	1939	8	-3	6817	-3	136	5prime_fragment	FALSE	canonical	3	10	junction_4	10.280442597476	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCCTATTATAAATTCC	NA	False	NA	NA	False	AGTAAA	-24	NA	72964634	72959824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_72960049_72962129_72962257_72963447_72963505_72963596_72963654_72964559
ENSMUSG00000021098.15_72959825_72964634_3	chr12	-	491	4	NIC	ENSMUSG00000021098.15	novel	2051	18	NA	NA	-3	136	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	9.42809041582063	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCCTATTATAAATTCC	NA	False	NA	NA	False	AGTAAA	-24	NA	72964634	72959824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_72960049_72963447_72963505_72963596_72963654_72964481
ENSMUSG00000021103.13_73158942_73319625_1	chr12	+	1393	9	NNC	ENSMUSG00000021103.13	novel	2505	8	NA	NA	-11549	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	125.672938614485	517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTTGTGGGATTTTTT	NA	False	NA	6	True	AATAAA	-16	NA	73158941	73319625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_73159029_73170552_73170701_73214773_73214927_73217367_73217442_73225978_73226083_73228557_73228699_73234913_73235040_73265794_73265917_73319187
ENSMUSG00000021103.13_73170491_73319626_2	chr12	+	1366	8	NNC	ENSMUSG00000021103.13	novel	2505	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	135.958727230745	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTGTGGGATTTTTTT	NA	False	NA	7	True	AATAAA	-17	NA	73170490	73319626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_73170705_73214780_73214927_73217367_73217442_73225978_73226083_73228557_73228699_73234913_73235040_73265794_73265917_73319187
ENSMUSG00000021103.13_73170491_73319626_3	chr12	+	1369	8	FSM	ENSMUSG00000021103.13	ENSMUST00000021523.7	2505	8	0	1136	0	1	multi-exon	FALSE	non_canonical	0	0	junction_6	110.46488037344	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTGTGGGATTTTTTT	NA	False	NA	7	True	AATAAA	-17	NA	73170490	73319626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_73170701_73214773_73214927_73217367_73217442_73225978_73226083_73228557_73228699_73234913_73235040_73265794_73265917_73319187
ENSMUSG00000021111.16_105750975_105775968_1	chr12	+	996	10	NNC	ENSMUSG00000021111.16	novel	1033	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	546.026680485916	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTCTTATTTCTGTGA	NA	False	NA	17	True	AATAAA	-20	NA	105750974	105775968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_105751055_105751132_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
ENSMUSG00000021111.16_105750975_105777671_1	chr12	+	2777	9	FSM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	-41	-1703	0	0	multi-exon	FALSE	canonical	3	1577	junction_3	94.8235202890085	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTATATTTTTTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	105750974	105777671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
ENSMUSG00000021111.16_105750975_105777671_2	chr12	+	1403	10	ISM	ENSMUSG00000021111.16	ENSMUST00000166498.8	2076	12	-17	2657	0	0	5prime_fragment	FALSE	canonical	3	944	junction_9	257.973776062224	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTATATTTTTTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	105750974	105777671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295
ENSMUSG00000021111.16_105750997_105780156_1	chr12	+	1899	12	FSM	ENSMUSG00000021111.16	ENSMUST00000166498.8	2076	12	5	172	0	-172	multi-exon	FALSE	canonical	3	944	junction_9	335.398664968735	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATATGGACTCGAGCCT	NA	False	NA	NA	False	AATAAA	-21	NA	105750996	105780156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456
ENSMUSG00000021111.16_105750997_105802504_1	chr12	+	3376	22	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	-613	combination_of_known_junctions	FALSE	canonical	3	65	junction_21	449.844346977859	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGATACAATTTTTTTT	NA	False	NA	8	True	AATAAA	-2	NA	105750996	105802504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ENSMUSG00000021113.6_74011300_74031159_1	chr12	+	1694	10	FSM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	0	4581	0	278	multi-exon	FALSE	canonical	3	65	junction_3	11.7473401244707	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATCTTCTAGTGTGTG	NA	False	NA	3	True	AATAAA	-15	NA	74011299	74031159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
ENSMUSG00000021114.10_78889776_78908327_1	chr12	-	1305	9	FSM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	85	2277	-58	0	multi-exon	FALSE	canonical	3	904	junction_8	86.5761947650739	3039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAATGATTTTAAAAACA	54	False	NA	-21	True	TTTAAA	-18	NA	78908327	78889775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ENSMUSG00000021114.10_78889776_78908327_2	chr12	-	1302	9	NNC	ENSMUSG00000021114.10	novel	3667	9	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	343.872046515852	3034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAATGATTTTAAAAACA	54	False	NA	-21	True	TTTAAA	-18	NA	78908327	78889775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_78890378_78891995_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ENSMUSG00000021115.16_105976551_106041459_1	chr12	+	1485	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	0	2226	0	0	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGGGTAATTTATAAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	105976550	106041459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ENSMUSG00000021115.16_105976551_106041459_2	chr12	+	1125	10	NIC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	320.534314720874	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGGGTAATTTATAAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	105976550	106041459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ENSMUSG00000021115.16_105976551_106041459_3	chr12	+	1065	9	NIC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	336.388168638554	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGGGTAATTTATAAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	105976550	106041459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ENSMUSG00000021115.16_105976551_106041459_4	chr12	+	1557	15	FSM	ENSMUSG00000021115.16	ENSMUST00000021539.16	1742	15	-24	209	0	0	multi-exon	FALSE	canonical	3	113	junction_12	308.222032678671	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGGGTAATTTATAAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	105976550	106041459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106039877_106039938_106041265
ENSMUSG00000021115.16_105976551_106041668_1	chr12	+	1694	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	0	2017	0	0	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	2184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAGCGTTTATTGAATG	NA	False	NA	23	True	AATAAA	-29	NA	105976550	106041668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ENSMUSG00000021115.16_105976551_106041668_2	chr12	+	1634	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	64	-189	0	0	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAGCGTTTATTGAATG	NA	False	NA	23	True	AATAAA	-29	NA	105976550	106041668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ENSMUSG00000021116.11_78908859_78932095_1	chr12	+	1450	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	266	1689	0	-1689	multi-exon	FALSE	canonical	3	3896	junction_3	411.382487498445	11430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGCTTCTTCCTTCTT	NA	False	NA	24	True	AATAAA	-17	NA	78908858	78932095	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ENSMUSG00000021118.8_78935785_78953739_1	chr12	-	1264	9	FSM	ENSMUSG00000021118.8	ENSMUST00000021544.8	1583	9	-1	320	-1	-320	multi-exon	FALSE	canonical	3	37	junction_6	8.60868021243675	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTATCATTATAAATGTTG	NA	False	NA	NA	False	NA	NA	NA	78953739	78935784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_78936082_78936685_78936765_78938902_78938987_78940850_78940953_78941161_78941350_78941646_78941739_78942905_78943088_78946828_78946994_78953664
ENSMUSG00000021120.12_79128451_79136425_1	chr12	-	1326	4	FSM	ENSMUSG00000021120.12	ENSMUST00000072154.9	2339	4	0	1013	0	-429	multi-exon	FALSE	canonical	3	102	junction_1	16.0485374896143	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATATCCACAACACACA	NA	False	NA	NA	False	NA	NA	NA	79136425	79128450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_79129271_79130389_79130474_79132420_79132631_79136213
ENSMUSG00000021120.12_79128973_79136425_1	chr12	-	804	4	FSM	ENSMUSG00000021120.12	ENSMUST00000072154.9	2339	4	0	1535	0	-951	multi-exon	FALSE	canonical	3	102	junction_1	16.0485374896143	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCAAGGGGAGACCTTAA	NA	False	NA	NA	False	AATACA	-17	NA	79136425	79128972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_79129271_79130389_79130474_79132420_79132631_79136213
ENSMUSG00000021124.14_79203103_79219222_1	chr12	-	954	6	NNC	ENSMUSG00000021124.14	novel	1490	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	289.79095914124	1383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTGAAGGAACAGCAACA	NA	False	NA	-75	True	NA	NA	NA	79219222	79203102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213179_79218993
ENSMUSG00000021124.14_79203103_79219222_2	chr12	-	951	6	NNC	ENSMUSG00000021124.14	novel	1490	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	289.79095914124	1153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTGAAGGAACAGCAACA	NA	False	NA	-75	True	NA	NA	NA	79219222	79203102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213176_79218993
ENSMUSG00000021127.8_80156326_80159787_1	chr12	-	1192	2	FSM	ENSMUSG00000021127.8	ENSMUST00000021552.3	2990	2	0	1798	0	0	multi-exon	FALSE	canonical	3	257	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCACCCCATCTCTT	9167	False	NA	NA	False	NA	NA	NA	80159787	80156325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_80157323_80159592
ENSMUSG00000021131.15_80680796_80690613_1	chr12	-	791	4	FSM	ENSMUSG00000021131.15	ENSMUST00000021559.14	1293	4	502	0	-7	0	multi-exon	FALSE	canonical	3	8000	junction_3	570.898122843881	31534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTTCTTATTTATTT	NA	False	NA	-1	True	AATAAA	-31	NA	80690613	80680795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80690537
ENSMUSG00000021131.15_80680796_80690613_2	chr12	-	848	5	FSM	ENSMUSG00000021131.15	ENSMUST00000166931.2	506	5	-7	-335	-7	0	multi-exon	FALSE	canonical	3	979	junction_4	3763.79924411491	32056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTTCTTATTTATTT	NA	False	NA	-1	True	AATAAA	-31	NA	80690613	80680795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80689562_80689620_80690537
ENSMUSG00000021131.15_80680952_80690613_1	chr12	-	635	4	FSM	ENSMUSG00000021131.15	ENSMUST00000021559.14	1293	4	502	156	-7	-156	multi-exon	FALSE	canonical	3	8000	junction_3	570.898122843881	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTTCCGGTCCTTGAA	NA	False	NA	NA	False	AATACA	-26	NA	80690613	80680951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80690537
ENSMUSG00000021134.18_80992306_80996945_1	chr12	+	1166	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110351.8	1498	8	0	332	0	-326	multi-exon	FALSE	canonical	3	289	junction_7	580.121838012305	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTGCTCACACTTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	80992305	80996945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
ENSMUSG00000021134.18_80992306_80996945_2	chr12	+	1289	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110356.3	1568	8	-53	332	0	-326	multi-exon	FALSE	canonical	3	562	junction_1	476.276244656911	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTGCTCACACTTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	80992305	80996945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ENSMUSG00000021134.18_80992306_80997132_1	chr12	+	1353	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110351.8	1498	8	0	145	0	-139	multi-exon	FALSE	canonical	3	289	junction_7	580.121838012305	1967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCTAAATTTGCTTGTA	NA	False	NA	7	True	ATTAAA	-29	NA	80992305	80997132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
ENSMUSG00000021136.14_81066205_81233188_1	chr12	+	3178	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7377	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	43.9365072196991	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81066204	81233188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_81066271_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ENSMUSG00000021136.14_81230681_81231472_1	chr12	+	285	2	ISM	ENSMUSG00000021136.14	ENSMUST00000021564.11	3439	13	157079	1712	157079	-1712	3prime_fragment	FALSE	canonical	3	175	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATAACTCTTACGTGTGT	NA	False	NA	NA	False	NA	NA	NA	81230680	81231472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_81230816_81231322
ENSMUSG00000021139.18_81405800_81579535_1	chr12	-	733	6	FSM	ENSMUSG00000021139.18	ENSMUST00000164386.8	1043	6	144	166	0	-166	multi-exon	FALSE	canonical	3	129	junction_3	83.1899032335054	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTCTCAGTGTTCC	NA	False	NA	-46	True	AATAAA	-19	NA	81579535	81405799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
ENSMUSG00000021139.18_81405800_81579651_1	chr12	-	849	6	FSM	ENSMUSG00000021139.18	ENSMUST00000164386.8	1043	6	28	166	0	-166	multi-exon	FALSE	canonical	3	129	junction_3	83.1899032335054	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTCTCAGTGTTCC	NA	False	NA	-46	True	AATAAA	-19	NA	81579651	81405799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
ENSMUSG00000021139.18_81405800_81579651_2	chr12	-	616	4	Fusion	ENSMUSG00000090935.11_ENSMUSG00000091803.8	novel	668	4	NA	NA	3	0	multi-exon	FALSE	canonical	1	2	junction_3	152.685588347063	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTCTCAGTGTTCC	NA	False	NA	-46	True	AATAAA	-19	NA	81579651	81405799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr12_-_81406119_81521360_81521424_81527704_81527777_81579489
ENSMUSG00000021139.18_81518869_81579535_1	chr12	-	671	6	FSM	ENSMUSG00000021139.18	ENSMUST00000166664.2	2284	6	121	1492	0	-1492	multi-exon	FALSE	canonical	3	129	junction_3	88.6715286887511	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGTATGCTTTTCAGT	NA	False	NA	-8	True	ATTAAA	-12	NA	81579535	81518868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_81519126_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
ENSMUSG00000021139.18_81518869_81579651_1	chr12	-	787	6	FSM	ENSMUSG00000021139.18	ENSMUST00000166664.2	2284	6	5	1492	0	-1492	multi-exon	FALSE	canonical	3	129	junction_3	88.6715286887511	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGTATGCTTTTCAGT	NA	False	NA	-8	True	ATTAAA	-12	NA	81579651	81518868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_81519126_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
ENSMUSG00000021139.18_81518869_81579651_2	chr12	-	650	5	NIC	ENSMUSG00000021139.18	novel	2284	6	NA	NA	0	-1492	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	125.893556229062	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGTATGCTTTTCAGT	NA	False	NA	-8	True	ATTAAA	-12	NA	81579651	81518868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_81519126_81521360_81521424_81527704_81527777_81551317_81551414_81579489
ENSMUSG00000021147.18_8902705_8921051_1	chr13	-	1583	5	FSM	ENSMUSG00000021147.18	ENSMUST00000176922.8	3780	5	8	2189	8	0	multi-exon	FALSE	canonical	3	80	junction_4	6.36396103067893	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTATACAGTGTGTG	NA	False	NA	NA	False	ATTAAA	-23	NA	8921051	8902704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ENSMUSG00000021149.9_9022661_9046086_1	chr13	-	2285	16	NIC	ENSMUSG00000021149.9	novel	2442	16	NA	NA	0	-145	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	195.391982094114	2269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATGACTTACATTTTG	NA	False	NA	-14	True	AGTAAA	-18	NA	9046086	9022660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9045984
ENSMUSG00000021156.18_9745711_9815243_1	chr13	-	933	7	ISM	ENSMUSG00000021156.18	ENSMUST00000110636.9	4117	15	107	10842	0	-537	5prime_fragment	FALSE	canonical	3	34	junction_6	49.4873721266345	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTCTTTGTAATTCATAC	NA	False	NA	0	True	ATTAAA	-22	NA	9815243	9745710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815090
ENSMUSG00000021175.16_117807623_117842441_1	chr12	+	2579	10	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	67.8081898983003	269	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGTCACCTGTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	117807622	117842441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837797_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ENSMUSG00000021177.17_99850776_99872757_1	chr12	+	1300	7	ISM	ENSMUSG00000021177.17	ENSMUST00000151019.8	3945	14	0	30864	0	-6081	5prime_fragment	FALSE	canonical	3	362	junction_1	62.5604152444304	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTGGTTTGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	99850775	99872757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294
ENSMUSG00000021188.15_101852166_101879399_1	chr12	-	2209	11	ISM	ENSMUSG00000021188.15	ENSMUST00000021605.14	9873	21	127	51864	0	313	5prime_fragment	TRUE	canonical	3	11	junction_10	3.89358446678636	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTCCAGCAGGAACGTG	7548	False	NA	NA	False	NA	NA	NA	101879399	101852165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860520_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872076_101878948
ENSMUSG00000021190.15_102360343_102405925_1	chr12	-	1857	14	FSM	ENSMUSG00000021190.15	ENSMUST00000021607.9	1990	14	147	-14	147	0	multi-exon	FALSE	canonical	3	371	junction_3	48.4071734133467	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTGGCTTTGTGGTTTG	7636	False	NA	-3	True	AAAACA	-29	NA	102405925	102360342	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843_102390015_102405889
ENSMUSG00000021193.11_6598195_6619157_1	chr13	+	2230	18	ISM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	8	11394	0	-1535	5prime_fragment	FALSE	canonical	3	407	junction_1	140.151993617212	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTTCCTCTGTAATAAT	NA	False	NA	NA	False	NA	NA	NA	6598194	6619157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934
ENSMUSG00000021193.11_6598195_6630078_1	chr13	+	3425	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	8	473	0	0	multi-exon	FALSE	canonical	3	407	junction_1	134.848435629472	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	NA	False	NA	16	True	TATAAA	-17	NA	6598194	6630078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021193.11_6598195_6630078_2	chr13	+	3419	27	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	221.640297774645	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	NA	False	NA	16	True	TATAAA	-17	NA	6598194	6630078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615032_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021196.15_6598195_6630078_1	chr13	-	3419	27	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	7053	31609	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCCAGTGTGGGACTGC	6591	False	NA	NA	False	NA	NA	NA	6630078	6598194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620643_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021196.15_6631218_6698761_1	chr13	-	2526	21	NIC	ENSMUSG00000021196.15	novel	2679	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_6	289.380247252642	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCCCATGGTACTTGG	NA	False	NA	-14	True	ATTAAA	-10	NA	6698761	6631217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ENSMUSG00000021196.15_6631218_6698761_2	chr13	-	2677	22	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	282.462045691516	2445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCCCATGGTACTTGG	NA	False	NA	-14	True	ATTAAA	-10	NA	6698761	6631217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_6631623_6632434_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ENSMUSG00000021196.15_6631218_6698761_3	chr13	-	2672	22	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	288.89070817498	2511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCCCATGGTACTTGG	NA	False	NA	-14	True	ATTAAA	-10	NA	6698761	6631217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669594_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ENSMUSG00000021196.15_6631218_6698761_4	chr13	-	2672	22	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	275.753965398698	2477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCCCATGGTACTTGG	NA	False	NA	-14	True	ATTAAA	-10	NA	6698761	6631217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_6631629_6632438_6632542_6634636_6634730_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ENSMUSG00000021200.15_103287405_103290127_1	chr12	-	635	2	ISM	ENSMUSG00000021200.15	ENSMUST00000127447.2	2399	6	11716	0	11716	0	3prime_fragment	FALSE	canonical	3	41	junction_1	0	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTCTGCCCTGTGATT	NA	False	NA	-6	True	AATAAA	-11	NA	103290127	103287404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_103287934_103290021
ENSMUSG00000021200.15_103287405_103291800_1	chr12	-	1172	3	ISM	ENSMUSG00000021200.15	ENSMUST00000127447.2	2399	6	10043	0	10043	0	3prime_fragment	FALSE	canonical	3	27	junction_2	7	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTCTGCCCTGTGATT	NA	False	NA	-6	True	AATAAA	-11	NA	103291800	103287404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_103287934_103290021_103290176_103291311
ENSMUSG00000021203.16_103355025_103372609_2	chr12	+	2707	7	NNC	ENSMUSG00000021203.16	novel	2791	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	65	junction_6	12.7638813323639	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGCTTCTTAATGTTG	8244	False	NA	NA	False	ATTAAA	-21	NA	103355024	103372609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_103355133_103366454_103366551_103367207_103367327_103369075_103369161_103369492_103369688_103370484_103372384_103372404
ENSMUSG00000021203.16_103355244_103372609_1	chr12	+	2723	7	NNC	ENSMUSG00000021203.16	novel	424	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	15	junction_1	30.0776772152815	66	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGCTTCTTAATGTTG	8463	False	NA	NA	False	ATTAAA	-21	NA	103355243	103372609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_103355368_103366454_103366551_103367207_103367327_103369075_103369161_103369492_103369688_103370484_103372384_103372404
ENSMUSG00000021215.16_3936609_3968195_1	chr13	-	1085	9	ISM	ENSMUSG00000021215.16	ENSMUST00000091853.12	2680	12	25	3276	-17	0	5prime_fragment	FALSE	canonical	3	132	junction_6	28.746467174246	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTACTGTTAAAAGAAATC	NA	False	NA	NA	False	NA	NA	NA	3968195	3936608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3957796_3957857_3962867_3962935_3967937
ENSMUSG00000021218.11_3588130_3615689_1	chr13	+	2054	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	67	2182	0	-131	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	6162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGGCTCCTCCCCCGGA	NA	False	NA	-96	True	AATACA	-19	NA	3588129	3615689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ENSMUSG00000021218.11_3588130_3615821_1	chr13	+	2186	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	67	2050	0	1	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	8272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGTATTGAGTGTCTG	NA	False	NA	36	True	AATAAA	-19	NA	3588129	3615821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ENSMUSG00000021218.11_3588130_3616207_1	chr13	+	2572	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	67	1664	0	387	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	8804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTTTTGTAGTGCAGCA	NA	False	NA	7	True	AATAAA	-16	NA	3588129	3616207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ENSMUSG00000021222.10_83567358_83588694_1	chr12	+	1895	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	118	-5	-50	0	multi-exon	FALSE	canonical	3	216	junction_9	23.528907060372	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATTTTGCCAAAGTATA	NA	False	NA	15	True	NA	NA	NA	83567357	83588694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ENSMUSG00000021226.8_84035009_84040651_1	chr12	+	1826	3	FSM	ENSMUSG00000021226.8	ENSMUST00000021649.8	2196	3	374	-4	374	4	multi-exon	FALSE	canonical	3	74	junction_2	1.5	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTGTCCTTCCTTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	84035008	84040651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_84035256_84037267_84037471_84039275
ENSMUSG00000021238.12_84477930_84497778_1	chr12	-	2961	12	FSM	ENSMUSG00000021238.12	ENSMUST00000085192.7	3399	12	-1	439	0	-439	multi-exon	FALSE	canonical	2	131	junction_11	16.2917613413438	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGACATTTATACTTT	NA	False	NA	NA	False	AAAACA	-36	NA	84497778	84477929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ENSMUSG00000021240.7_84649307_84660929_1	chr12	-	2205	16	ISM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	3215	-120	1232	0	3prime_fragment	FALSE	canonical	3	177	junction_14	24.1887025971492	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATAGACTGATTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	84660929	84649306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678
ENSMUSG00000021240.7_84649307_84664157_1	chr12	-	2195	17	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_16	51.6547659345195	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATAGACTGATTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	84664157	84649306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84664056
ENSMUSG00000021240.7_84649307_84664157_2	chr12	-	2442	19	FSM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	-13	-120	-13	0	multi-exon	FALSE	canonical	3	128	junction_18	37.2765772285566	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATAGACTGATTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	84664157	84649306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
ENSMUSG00000021241.8_84820052_84820671_1	chr12	+	417	2	FSM	ENSMUSG00000021241.8	ENSMUST00000223089.2	843	2	-13	439	0	204	multi-exon	FALSE	canonical	3	319	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGACGACAGGCAAGGAGG	NA	False	NA	NA	False	AATACA	-27	NA	84820051	84820671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_84820146_84820348
ENSMUSG00000021241.8_84820052_84821862_1	chr12	+	1493	3	ISM	ENSMUSG00000021241.8	ENSMUST00000021667.7	883	4	27	-3	0	0	intron_retention	FALSE	canonical	3	219	junction_2	50	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	15	True	TATAAA	-18	NA	84820051	84821862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_84820146_84820348_84820452_84820566
ENSMUSG00000021241.8_84820052_84821862_2	chr12	+	1608	2	FSM	ENSMUSG00000021241.8	ENSMUST00000223089.2	843	2	-13	-752	0	0	multi-exon	FALSE	canonical	3	319	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	15	True	TATAAA	-18	NA	84820051	84821862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_84820146_84820348
ENSMUSG00000021241.8_84820052_84821862_3	chr12	+	743	3	FSM	ENSMUSG00000021241.8	ENSMUST00000222022.2	485	3	-47	-211	0	0	multi-exon	FALSE	canonical	3	134	junction_2	92.5	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	15	True	TATAAA	-18	NA	84820051	84821862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_84820146_84820348_84820452_84821316
ENSMUSG00000021242.10_84803266_84819688_1	chr12	-	1123	4	NNC	ENSMUSG00000021242.10	novel	3299	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	87	junction_2	1373.25315299919	12349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGCTTGGTTTTGTTTTT	NA	False	NA	-27	True	ATTAAA	-17	NA	84819688	84803265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_84803987_84807493_84807659_84812050_84812159_84819559
ENSMUSG00000021242.10_84803266_84819732_1	chr12	-	1175	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	194	1930	-44	0	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	13063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGCTTGGTTTTGTTTTT	NA	False	NA	-27	True	ATTAAA	-17	NA	84819732	84803265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
ENSMUSG00000021243.15_85017671_85030077_1	chr12	+	742	8	NNC	ENSMUSG00000021243.15	novel	749	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	762.358370921633	2376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTGTCTCAATTCTTA	4629	False	NA	23	True	ATTAAA	-25	NA	85017670	85030077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_85017740_85017988_85018057_85019763_85019836_85020871_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ENSMUSG00000021243.15_85017671_85030077_2	chr12	+	744	8	NNC	ENSMUSG00000021243.15	novel	749	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	766.577684868778	1216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTGTCTCAATTCTTA	4629	False	NA	23	True	ATTAAA	-25	NA	85017670	85030077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_85017740_85017988_85018057_85019768_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ENSMUSG00000021248.10_85387388_85421473_1	chr12	-	3508	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	148	-2174	-9	0	multi-exon	FALSE	canonical	3	1293	junction_2	34.3110769285955	4178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGTGTATTTGTCTGT	8612	False	NA	-1	True	AATAAA	-16	NA	85421473	85387387	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
ENSMUSG00000021248.10_85389562_85421473_1	chr12	-	1334	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	148	0	-9	0	multi-exon	FALSE	canonical	3	1293	junction_2	34.3110769285955	3923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTCCTTGTGTATGTGT	8612	False	NA	-5	True	ATTAAA	-20	NA	85421473	85389561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
ENSMUSG00000021248.10_85389562_85421473_2	chr12	-	1328	5	NNC	ENSMUSG00000021248.10	novel	1482	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	558.623755313001	3752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTCCTTGTGTATGTGT	8612	False	NA	-5	True	ATTAAA	-20	NA	85421473	85389561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_85390324_85390998_85391126_85397576_85397645_85401568_85401681_85421214
ENSMUSG00000021248.10_85389937_85421473_1	chr12	-	959	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	148	375	-9	202	multi-exon	FALSE	canonical	3	1293	junction_2	34.3110769285955	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGGTTACCTAGATAACG	8612	False	NA	NA	False	ATTAAA	-42	NA	85421473	85389936	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
ENSMUSG00000021252.12_85862222_85871318_1	chr12	-	1030	4	NIC	ENSMUSG00000021252.12	novel	1169	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	367.864407387046	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTCTGTGTACTTTGGC	NA	False	NA	-4	True	AATAAA	-21	NA	85871318	85862221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_85862968_85863089_85863209_85866252_85866344_85871244
ENSMUSG00000021252.12_85862222_85871652_1	chr12	-	1525	5	FSM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	-356	0	-328	0	multi-exon	FALSE	canonical	3	716	junction_4	65.9104506129339	2679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTCTGTGTACTTTGGC	NA	False	NA	-4	True	AATAAA	-21	NA	85871652	85862221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
ENSMUSG00000021254.10_86288649_86336029_1	chr12	+	1809	10	FSM	ENSMUSG00000021254.10	ENSMUST00000221368.2	4355	10	17	2529	0	-2115	multi-exon	FALSE	canonical	3	40	junction_9	9.46077020329245	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGTGTAGAGCTTTTC	NA	False	NA	NA	False	NA	NA	NA	86288648	86336029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
ENSMUSG00000021255.18_86516891_86566950_2	chr12	+	2455	6	FSM	ENSMUSG00000021255.18	ENSMUST00000167891.2	1344	6	0	-1111	0	376	multi-exon	FALSE	canonical	3	623	junction_2	30.0905300717684	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCATGCTGTGTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	86516890	86566950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ENSMUSG00000021255.18_86516891_86568402_1	chr12	+	3376	6	NNC	ENSMUSG00000021255.18	novel	1344	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	264.780210740909	2081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTTCATGCGTTGTCTGT	NA	False	NA	19	True	AATAAA	-19	NA	86516890	86568402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561303_86566103
ENSMUSG00000021255.18_86516891_86568402_2	chr12	+	2081	7	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	245.866946854504	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTTCATGCGTTGTCTGT	NA	False	NA	19	True	AATAAA	-19	NA	86516890	86568402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594_86565907_86567732
ENSMUSG00000021255.18_86516891_86568402_3	chr12	+	3907	6	FSM	ENSMUSG00000021255.18	ENSMUST00000167891.2	1344	6	0	-2563	0	0	multi-exon	FALSE	canonical	3	623	junction_2	30.0905300717684	2505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTTCATGCGTTGTCTGT	NA	False	NA	19	True	AATAAA	-19	NA	86516890	86568402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ENSMUSG00000021255.18_86516891_86568402_4	chr12	+	2079	7	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	245.866946854504	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTTCATGCGTTGTCTGT	NA	False	NA	19	True	AATAAA	-19	NA	86516890	86568402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594_86565909_86567736
ENSMUSG00000021258.11_108145997_108168416_1	chr12	+	1430	12	FSM	ENSMUSG00000021258.11	ENSMUST00000221167.2	2789	12	159	1200	0	11	multi-exon	FALSE	canonical	3	54	junction_11	12.5217166726353	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCCCCTCCAGCCCACC	NA	False	NA	NA	False	NA	NA	NA	108145996	108168416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_108146140_108148435_108148468_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334
ENSMUSG00000021258.11_108145997_108168416_2	chr12	+	1398	11	NIC	ENSMUSG00000021258.11	novel	2789	12	NA	NA	0	11	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	19.4483932498291	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCCCCTCCAGCCCACC	NA	False	NA	NA	False	NA	NA	NA	108145996	108168416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_108146140_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334
ENSMUSG00000021258.11_108145997_108168729_1	chr12	+	1743	12	FSM	ENSMUSG00000021258.11	ENSMUST00000221167.2	2789	12	159	887	0	324	multi-exon	FALSE	canonical	3	54	junction_11	12.5217166726353	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTACCCTCCCCCTCCCCC	NA	False	NA	NA	False	NA	NA	NA	108145996	108168729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_108146140_108148435_108148468_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334
ENSMUSG00000021258.11_108145997_108168729_2	chr12	+	1711	11	NIC	ENSMUSG00000021258.11	novel	2789	12	NA	NA	0	324	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	19.4483932498291	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTACCCTCCCCCTCCCCC	NA	False	NA	NA	False	NA	NA	NA	108145996	108168729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_108146140_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334
ENSMUSG00000021258.11_108145997_108169618_1	chr12	+	2632	12	FSM	ENSMUSG00000021258.11	ENSMUST00000221167.2	2789	12	159	-2	0	0	multi-exon	FALSE	canonical	3	54	junction_11	12.5217166726353	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTGTGAGTACAGCC	NA	False	NA	26	True	AATAAA	-19	NA	108145996	108169618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_108146140_108148435_108148468_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334
ENSMUSG00000021266.17_108825956_108860063_1	chr12	-	1859	11	NIC	ENSMUSG00000021266.17	novel	2878	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	246	junction_1	519.514003661114	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	False	NA	-31	True	AATAAA	-19	NA	108860063	108825955	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_108826260_108827194_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ENSMUSG00000021266.17_108825956_108860063_2	chr12	-	2788	10	NNC	ENSMUSG00000021266.17	novel	2878	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	607.288326177205	2875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	False	NA	-31	True	AATAAA	-19	NA	108860063	108825955	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833698_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ENSMUSG00000021268.18_109506888_109538160_1	chr12	+	1682	8	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	137.349249457471	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506887	109538160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ENSMUSG00000021268.18_109506888_109538160_2	chr12	+	1726	8	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	128.442792792777	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506887	109538160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ENSMUSG00000021268.18_109506888_109538160_3	chr12	+	1807	9	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	241	junction_3	82.0182906430023	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506887	109538160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ENSMUSG00000021268.18_109506888_109538160_4	chr12	+	1857	10	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_3	145.012983667321	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506887	109538160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109510830_109510925_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ENSMUSG00000021268.18_109506888_109538160_5	chr12	+	1763	9	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	187	junction_2	97.0602261485105	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506887	109538160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ENSMUSG00000021268.18_109516179_109538155_1	chr12	+	482	3	ISM	ENSMUSG00000021268.18	ENSMUST00000143847.8	706	5	3851	1	489	0	3prime_fragment	FALSE	canonical	3	415	junction_1	2	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGCAGTGATGGGTGTG	NA	False	NA	NA	False	NA	NA	NA	109516178	109538155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_109516246_109524670_109524755_109537824
ENSMUSG00000021270.14_110656842_110662743_1	chr12	-	3392	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	86	-197	-20	197	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	32387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTCTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	110662743	110656841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ENSMUSG00000021270.14_110657462_110662115_1	chr12	-	2710	10	NNC	ENSMUSG00000021270.14	novel	2852	11	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4377.6472907795	6487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662115	110657461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660769_110661000_110661139_110661485_110661853_110661952
ENSMUSG00000021270.14_110657462_110662743_1	chr12	-	2770	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4153.52792815939	13700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662743	110657461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660772_110661000_110661139_110661485_110661853_110661952_110662115_110662685
ENSMUSG00000021270.14_110657462_110662743_2	chr12	-	2764	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4138.75546632076	10179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662743	110657461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659587_110659738_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ENSMUSG00000021270.14_110657462_110662743_3	chr12	-	2758	11	NNC	ENSMUSG00000021270.14	novel	2852	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	4156.70037409482	9013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662743	110657461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662097_110662681
ENSMUSG00000021270.14_110657462_110662743_4	chr12	-	2763	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4127.13144932409	16328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662743	110657461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110658084_110658547_110658882_110659046_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ENSMUSG00000021270.14_110657462_110662743_5	chr12	-	2763	11	NNC	ENSMUSG00000021270.14	novel	2852	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	4156.70037409482	10523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662743	110657461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662106_110662685
ENSMUSG00000021270.14_110657462_110662743_6	chr12	-	2767	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	4140.30419293076	15845	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662743	110657461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661490_110661853_110661952_110662115_110662685
ENSMUSG00000021270.14_110657462_110662743_7	chr12	-	2766	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	1	28	junction_1	3837.92163677165	18226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662743	110657461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110658084_110658553_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ENSMUSG00000021270.14_110657462_110669162_1	chr12	-	2820	11	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	4149.70050124102	9001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110669162	110657461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110669056
ENSMUSG00000021270.14_110657575_110662743_1	chr12	-	2657	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	-113	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4153.52792815939	1334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACAACCCTAAGTTTCC	NA	False	NA	99	True	AAAACA	-43	NA	110662743	110657574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660772_110661000_110661139_110661485_110661853_110661952_110662115_110662685
ENSMUSG00000021270.14_110657575_110662743_2	chr12	-	2650	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	-113	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4127.13144932409	1828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACAACCCTAAGTTTCC	NA	False	NA	99	True	AAAACA	-43	NA	110662743	110657574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110658084_110658547_110658882_110659046_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ENSMUSG00000021270.14_110657575_110662743_3	chr12	-	2653	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	-113	at_least_one_novel_splicesite	FALSE	canonical	1	28	junction_1	3837.92163677165	2505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACAACCCTAAGTTTCC	NA	False	NA	99	True	AAAACA	-43	NA	110662743	110657574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110658084_110658553_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ENSMUSG00000021273.12_63383852_63402374_1	chr14	-	1795	7	FSM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	0	1253	0	-1250	multi-exon	FALSE	canonical	3	727	junction_5	64.1242283904194	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCCTTGTCTTTCTCAT	2882	False	NA	-34	True	AATAGA	-13	NA	63402374	63383851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980
ENSMUSG00000021273.12_63383852_63415260_1	chr14	-	1628	8	FSM	ENSMUSG00000021273.12	ENSMUST00000054963.10	2860	8	-18	1250	-14	-1250	multi-exon	FALSE	canonical	3	727	junction_5	70.2819395037456	3076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCCTTGTCTTTCTCAT	4293	False	NA	-34	True	AATAGA	-13	NA	63415260	63383851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131
ENSMUSG00000021273.12_63384398_63415312_1	chr14	-	1134	8	FSM	ENSMUSG00000021273.12	ENSMUST00000054963.10	2860	8	-70	1796	-66	-1796	multi-exon	FALSE	canonical	3	727	junction_5	70.2819395037456	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGACCCATCATCAAGCA	4241	False	NA	NA	False	NA	NA	NA	63415312	63384397	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131
ENSMUSG00000021276.11_110839596_110855567_1	chr12	-	1461	5	NNC	ENSMUSG00000021276.11	novel	1579	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	167.939535250042	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATATTAATCCTGTTG	3361	False	NA	-10	True	NA	NA	NA	110855567	110839595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110840564_110843274_110843405_110846118_110846241_110850319_110850493_110855499
ENSMUSG00000021276.11_110839596_110855567_2	chr12	-	1560	6	NNC	ENSMUSG00000021276.11	novel	1579	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	199.354558513218	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATATTAATCCTGTTG	3361	False	NA	-10	True	NA	NA	NA	110855567	110839595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110840564_110842582_110842678_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ENSMUSG00000021276.11_110839596_110855567_3	chr12	-	1609	6	NNC	ENSMUSG00000021276.11	novel	1579	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	201.929096467052	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATATTAATCCTGTTG	3361	False	NA	-10	True	NA	NA	NA	110855567	110839595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110840564_110840646_110840791_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ENSMUSG00000021276.11_110839596_110855567_4	chr12	-	1335	4	FSM	ENSMUSG00000021276.11	ENSMUST00000221102.2	536	4	-14	-785	0	0	multi-exon	FALSE	canonical	2	10	junction_1	203.882318997995	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATATTAATCCTGTTG	3361	False	NA	-10	True	NA	NA	NA	110855567	110839595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_110840564_110846118_110846249_110850323_110850493_110855499
ENSMUSG00000021276.11_110839596_110855567_5	chr12	-	1464	5	NNC	ENSMUSG00000021276.11	novel	1579	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	181.903820740522	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATATTAATCCTGTTG	3361	False	NA	-10	True	NA	NA	NA	110855567	110839595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110840559_110843270_110843405_110846118_110846249_110850323_110850493_110855499
ENSMUSG00000021276.11_110839596_110855567_6	chr12	-	1465	5	FSM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	12	552	0	0	multi-exon	FALSE	canonical	3	237	junction_1	85.0951673128386	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATATTAATCCTGTTG	3361	False	NA	-10	True	NA	NA	NA	110855567	110839595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_110840564_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ENSMUSG00000021276.11_110840082_110855567_1	chr12	-	979	5	FSM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	12	1038	0	0	multi-exon	FALSE	canonical	3	237	junction_1	85.0951673128386	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTCTTTTTTGTG	3361	False	NA	6	True	NA	NA	NA	110855567	110840081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_110840564_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ENSMUSG00000021276.11_110844029_110855567_1	chr12	-	817	5	NNC	ENSMUSG00000021276.11	novel	744	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	213.008802635008	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTAGTTATTTCTGT	3361	False	NA	-3	True	AATAAA	-18	NA	110855567	110844028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110844427_110845421_110845474_110846118_110846249_110850323_110850493_110855499
ENSMUSG00000021276.11_110844029_110855567_2	chr12	-	765	4	NNC	ENSMUSG00000021276.11	novel	744	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	208.591040608705	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTAGTTATTTCTGT	3361	False	NA	-3	True	AATAAA	-18	NA	110855567	110844028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110844427_110846118_110846249_110850323_110850493_110855499
ENSMUSG00000021286.9_111780669_111794820_1	chr12	+	1234	7	NNC	ENSMUSG00000021286.9	novel	1308	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	284.428667097159	1270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGGCTCTGGCCTCA	NA	False	NA	16	True	ATTAAA	-17	NA	111780668	111794820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794260
ENSMUSG00000021286.9_111780669_111794820_2	chr12	+	1297	8	FSM	ENSMUSG00000021286.9	ENSMUST00000223211.2	794	8	27	-530	0	0	multi-exon	FALSE	canonical	3	188	junction_5	258.732309855699	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGGCTCTGGCCTCA	NA	False	NA	16	True	ATTAAA	-17	NA	111780668	111794820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793976_111794120_111794251
ENSMUSG00000021286.9_111785158_111794822_1	chr12	+	1249	7	NNC	ENSMUSG00000021286.9	novel	541	2	NA	NA	2468	2	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	278.162871953346	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTCTGGCCTCACT	3396	False	NA	18	True	ATTAAA	-19	NA	111785157	111794822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_111785305_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
ENSMUSG00000021290.7_111927809_111933411_2	chr12	-	346	3	NNC	ENSMUSG00000021290.7	novel	366	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1348	12393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCTTCCCCTGAGTA	NA	False	NA	-7	True	AATAAA	-18	NA	111933411	111927808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_111927973_111929659_111929788_111933357
ENSMUSG00000021306.12_13533201_13568180_1	chr13	-	2201	8	FSM	ENSMUSG00000021306.12	ENSMUST00000223093.2	2351	8	-31	181	0	0	multi-exon	FALSE	canonical	3	34	junction_1	66.0247325335169	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTTTGTAGAGTTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	13568180	13533200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_13534009_13535412_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ENSMUSG00000021306.12_13533712_13568180_1	chr13	-	1690	8	FSM	ENSMUSG00000021306.12	ENSMUST00000223093.2	2351	8	-31	692	0	-511	multi-exon	FALSE	canonical	3	34	junction_1	66.0247325335169	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATCTGGCTATTTCAGT	NA	False	NA	NA	False	AATAAA	-17	NA	13568180	13533711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_13534009_13535412_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ENSMUSG00000021306.12_13535496_13568180_1	chr13	-	1310	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	29	2295	0	-2295	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAATTTGTCATTCTTAA	NA	False	NA	-3	True	AATATA	-44	NA	13568180	13535495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ENSMUSG00000021311.10_12201424_12273056_1	chr13	-	4543	33	FSM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-75	3826	-57	0	multi-exon	FALSE	canonical	3	145	junction_5	17.0824917221552	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTTGAATACAAGGAGAA	5886	False	NA	46	True	ATTAAA	-15	NA	12273056	12201423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ENSMUSG00000021314.14_19132521_19270971_1	chr13	+	661	5	ISM	ENSMUSG00000021314.14	ENSMUST00000200273.2	1756	9	-47	14825	0	-14825	5prime_fragment	FALSE	canonical	3	55	junction_2	6.83282518435822	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCCTCTTAGTGAACGCT	NA	False	NA	NA	False	AATAAA	-21	NA	19132520	19270971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692
ENSMUSG00000021314.14_19132521_19335091_1	chr13	+	3221	21	FSM	ENSMUSG00000021314.14	ENSMUST00000003345.10	3367	21	146	0	0	0	multi-exon	FALSE	canonical	3	40	junction_16	8.61669890387264	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTTTTTCAAGAGTG	NA	False	NA	19	True	AATAAA	-24	NA	19132520	19335091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305490_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
ENSMUSG00000021327.20_21572331_21586883_1	chr13	-	1403	6	FSM	ENSMUSG00000021327.20	ENSMUST00000070785.16	2561	6	0	1158	0	444	multi-exon	FALSE	canonical	3	51	junction_5	21.2452347598232	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGCGTAGCTCACATCTT	NA	False	NA	NA	False	NA	NA	NA	21586883	21572330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580748_21586841
ENSMUSG00000021360.17_41040669_41112056_1	chr13	+	1618	3	FSM	ENSMUSG00000021360.17	ENSMUST00000069958.15	3929	3	0	2311	0	352	multi-exon	FALSE	canonical	3	51	junction_1	65	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTCTTCTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	41040668	41112056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_41041762_41107051_41107148_41111627
ENSMUSG00000021361.8_41169768_41176062_1	chr13	+	855	5	NIC	ENSMUSG00000021361.8	novel	914	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	108	junction_1	251.069089097005	3851	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTCGTCTTTGTTAG	NA	False	NA	15	True	AATAAA	-22	NA	41169767	41176062	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_41169875_41171181_41171259_41171831_41171934_41174594_41174683_41175581
ENSMUSG00000021368.16_43305220_43324832_1	chr13	-	1114	8	FSM	ENSMUSG00000021368.16	ENSMUST00000179852.9	1246	8	128	4	-8	0	multi-exon	FALSE	canonical	3	148	junction_7	48.9393627307283	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCCTGGCGTGGCCAT	NA	False	NA	-21	True	AGTAAA	-12	NA	43324832	43305219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
ENSMUSG00000021368.16_43305320_43324946_1	chr13	-	1128	8	FSM	ENSMUSG00000021368.16	ENSMUST00000179852.9	1246	8	14	104	0	0	multi-exon	FALSE	canonical	3	148	junction_7	48.9393627307283	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCACCTGCTCTACCAA	NA	False	NA	-121	True	NA	NA	NA	43324946	43305319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
ENSMUSG00000021376.12_47178655_47196646_1	chr13	-	1009	9	NIC	ENSMUSG00000021376.12	novel	2708	9	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	30.2438010177292	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATTAGCCATGGTTTC	NA	False	NA	-2	True	ATTAAA	-17	NA	47196646	47178654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196602
ENSMUSG00000021376.12_47178655_47196646_2	chr13	-	1032	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	40	1636	-26	0	multi-exon	FALSE	canonical	3	68	junction_8	22.6436387314407	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATTAGCCATGGTTTC	NA	False	NA	-2	True	ATTAAA	-17	NA	47196646	47178654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
ENSMUSG00000021377.16_47238258_47259159_1	chr13	-	2384	10	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	507	0	147	0	3prime_fragment	FALSE	canonical	3	1428	junction_1	93.7092956902645	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	-15	True	AATAAA	-20	NA	47259159	47238257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047
ENSMUSG00000021385.11_49574725_49616466_1	chr13	+	2838	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	0	1583	0	0	multi-exon	FALSE	canonical	3	101	junction_9	16.41053184865	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTATAGAGTTTGTTAAAT	NA	False	NA	11	True	NA	NA	NA	49574724	49616466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
ENSMUSG00000021385.11_49574725_49616466_2	chr13	+	2395	10	NNC	ENSMUSG00000021385.11	novel	4421	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	45.1649924522287	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTATAGAGTTTGTTAAAT	NA	False	NA	11	True	NA	NA	NA	49574724	49616466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49599944_49615009
ENSMUSG00000021385.11_49617499_49806243_1	chr13	+	948	6	NIC	ENSMUSG00000021385.11	novel	4421	13	NA	NA	42409	188194	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGAGCGCGCGCGCTCCTG	8350	False	NA	NA	False	NA	NA	NA	49617498	49806243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49803596_49803776_49806058
ENSMUSG00000021385.11_49617499_49806243_2	chr13	+	940	6	NIC	ENSMUSG00000021385.11	novel	4421	13	NA	NA	42409	188194	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGAGCGCGCGCGCTCCTG	8350	False	NA	NA	False	NA	NA	NA	49617498	49806243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_49617814_49618170_49618263_49619154_49619235_49801041_49801131_49803596_49803776_49806058
ENSMUSG00000021385.11_49617499_49806243_3	chr13	+	943	6	NNC	ENSMUSG00000021385.11	novel	4421	13	NA	NA	42409	188194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGAGCGCGCGCGCTCCTG	8350	False	NA	NA	False	NA	NA	NA	49617498	49806243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_49617814_49618170_49618263_49619154_49619235_49780730_49780823_49803596_49803776_49806058
ENSMUSG00000021385.11_49617499_49806243_4	chr13	+	1121	8	NNC	ENSMUSG00000021385.11	novel	4421	13	NA	NA	42409	188194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGAGCGCGCGCGCTCCTG	8350	False	NA	NA	False	NA	NA	NA	49617498	49806243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_49617814_49618170_49618263_49619154_49619235_49780730_49780823_49794701_49794791_49801041_49801131_49803596_49803776_49806058
ENSMUSG00000021385.11_49617499_49806243_5	chr13	+	1037	7	NIC	ENSMUSG00000021385.11	novel	4421	13	NA	NA	42409	188194	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGAGCGCGCGCGCTCCTG	8350	False	NA	NA	False	NA	NA	NA	49617498	49806243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49803596_49803776_49806058
ENSMUSG00000021391.11_49800886_49806243_1	chr13	-	609	3	ISM	ENSMUSG00000021391.11	ENSMUST00000221751.2	2059	6	0	88515	0	-88515	5prime_fragment	FALSE	canonical	3	162	junction_1	19	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACATTTTTCTCTTTTTTT	NA	False	NA	NA	False	AATACA	-45	NA	49806243	49800885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_49801131_49803596_49803776_49806058
ENSMUSG00000021415.14_35130768_35147793_1	chr13	+	1176	9	Genic_Genomic	ENSMUSG00000021415.14	novel	1045	5	NA	NA	22376	7935	multi-exon	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGACAAACAGAGCCGAGA	NA	False	NA	NA	False	NA	NA	NA	35130767	35147793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_35131074_35132054_35132199_35132727_35132818_35136963_35137085_35138064_35138165_35140843_35140914_35143856_35144046_35144383_35144483_35147736
ENSMUSG00000021417.16_35161733_35178105_1	chr13	-	1586	10	FSM	ENSMUSG00000021417.16	ENSMUST00000021854.14	1746	10	159	1	0	0	multi-exon	FALSE	canonical	3	47	junction_9	45.5959170795038	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178105	35161732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177812
ENSMUSG00000021418.16_36080687_36089988_1	chr13	-	1035	8	NNC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	323	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	192.402639041683	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGTTTGTTGTC	NA	False	NA	-6	True	CATAAA	-23	NA	36089988	36080686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36089945
ENSMUSG00000021418.16_36080687_36090328_1	chr13	-	1128	8	NNC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	195.02087800321	2019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGTTTGTTGTC	NA	False	NA	-6	True	CATAAA	-23	NA	36090328	36080686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_36080909_36082547_36082673_36082793_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36090186
ENSMUSG00000021420.14_36301637_36721567_2	chr13	+	1671	7	NIC	ENSMUSG00000021420.14	novel	2125	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	85.194711625129	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36301636	36721567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_36301777_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ENSMUSG00000021427.11_38162649_38178155_1	chr13	-	2017	8	NNC	ENSMUSG00000021427.11	novel	9333	8	NA	NA	-22	-7272	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	347.400844758293	2187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTTAAGATTTCAAGACC	5884	False	NA	NA	False	NA	NA	NA	38178155	38162648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_38163777_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ENSMUSG00000021427.11_38162649_38178155_2	chr13	-	2023	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	38	7272	-22	-7272	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	2195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTTAAGATTTCAAGACC	5884	False	NA	NA	False	NA	NA	NA	38178155	38162648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ENSMUSG00000021427.11_38163471_38178155_1	chr13	-	1201	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	38	8094	-22	-8094	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGAGCAGTTGTCTT	5884	False	NA	36	True	ATTAAA	-16	NA	38178155	38163470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ENSMUSG00000021428.10_38221221_38244796_1	chr13	+	1875	17	FSM	ENSMUSG00000021428.10	ENSMUST00000021866.10	2738	17	250	613	0	0	multi-exon	FALSE	canonical	3	187	junction_3	18.4889113727661	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGGAAAAAAC	4738	False	NA	NA	False	AATAAA	-16	NA	38221220	38244796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ENSMUSG00000021428.10_38221221_38245405_1	chr13	+	2479	17	NNC	ENSMUSG00000021428.10	novel	2738	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	56.3126040509583	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTAGTTTGCATTCTT	4738	False	NA	14	True	AATAAA	-15	NA	38221220	38245405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244735
ENSMUSG00000021428.10_38221221_38245405_2	chr13	+	2479	17	NNC	ENSMUSG00000021428.10	novel	2738	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	55.9254176895443	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTAGTTTGCATTCTT	4738	False	NA	14	True	AATAAA	-15	NA	38221220	38245405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234788_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ENSMUSG00000021428.10_38221221_38245405_3	chr13	+	2484	17	FSM	ENSMUSG00000021428.10	ENSMUST00000021866.10	2738	17	250	4	0	2	multi-exon	FALSE	canonical	3	187	junction_3	18.4889113727661	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTAGTTTGCATTCTT	4738	False	NA	14	True	AATAAA	-15	NA	38221220	38245405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ENSMUSG00000021431.16_38388921_38411028_1	chr13	+	1185	9	NNC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	0	72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	100.421533422867	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAAATTGTACACTACAC	NA	False	NA	8	True	AATAAA	-16	NA	38388920	38411028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395127_38400300_38400490_38401349_38401476_38404663_38404753_38405210_38405370_38410849
ENSMUSG00000021432.16_39116281_39144489_1	chr13	-	1413	9	FSM	ENSMUSG00000021432.16	ENSMUST00000224645.2	802	9	-6	-605	0	0	multi-exon	FALSE	canonical	3	22	junction_7	12.4473892845046	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTTTTAATAGAATTTG	NA	False	NA	NA	False	AATAAA	-24	NA	39144489	39116280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139796_39139913_39144407
ENSMUSG00000021458.18_63387846_63450688_1	chr13	+	1644	6	FSM	ENSMUSG00000021458.18	ENSMUST00000222929.2	1055	6	3	-592	0	3	multi-exon	FALSE	canonical	3	67	junction_1	29.9933325924279	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCACTCTGGCCTTGCTT	NA	False	NA	29	True	AATAAA	-29	NA	63387845	63450688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525_63446671_63449592
ENSMUSG00000021458.18_63418497_63450685_1	chr13	+	1559	5	NNC	ENSMUSG00000021458.18	novel	587	3	NA	NA	-1818	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	54.8241507002161	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCACTCTGGCCTTG	NA	False	NA	26	True	AATAAA	-26	NA	63418496	63450685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_63418614_63429955_63430073_63444671_63444759_63446525_63446671_63449592
ENSMUSG00000021461.18_63459569_63579519_2	chr13	-	2876	15	FSM	ENSMUSG00000021461.18	ENSMUST00000161977.8	3111	15	19	216	-11	0	multi-exon	FALSE	canonical	3	59	junction_14	18.8014599954148	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTCAGACCTTCCTACT	NA	False	NA	-7	True	AATAAA	-17	NA	63579519	63459568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ENSMUSG00000021461.18_63459949_63579519_2	chr13	-	2496	15	FSM	ENSMUSG00000021461.18	ENSMUST00000161977.8	3111	15	19	596	-11	0	multi-exon	FALSE	canonical	3	59	junction_14	18.8014599954148	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGAGTCCTTGTCCTCCT	NA	False	NA	-1	True	AGTAAA	-18	NA	63579519	63459948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ENSMUSG00000021468.9_53487284_53531401_1	chr13	-	2074	15	FSM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	32	500	0	-500	multi-exon	FALSE	canonical	3	146	junction_11	13.0690864412232	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATCATGCCCTTGGTAT	1861	False	NA	-28	True	NA	NA	NA	53531401	53487283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
ENSMUSG00000021474.10_54225888_54262365_1	chr13	+	2780	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	264.208800004845	1039	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225887	54262365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_54225945_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ENSMUSG00000021477.10_64511610_64518120_1	chr13	-	1383	8	NNC	ENSMUSG00000021477.10	novel	1971	8	NA	NA	0	-582	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	475.148011311277	9212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGACTTCAGTGTGTAA	NA	False	NA	-6	True	AATAAA	-22	NA	64518120	64511609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514901_64515673_64515821_64515929_64516053_64516841_64516979_64518049
ENSMUSG00000021477.10_64511610_64518120_2	chr13	-	1389	8	FSM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	0	582	0	-582	multi-exon	FALSE	canonical	3	1187	junction_3	95.3616103822386	9226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGACTTCAGTGTGTAA	NA	False	NA	-6	True	AATAAA	-22	NA	64518120	64511609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
ENSMUSG00000021482.11_64438891_64460407_1	chr13	-	1614	6	FSM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	117	1280	0	750	multi-exon	TRUE	canonical	3	150	junction_1	21.3672646822189	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTTTTGAGACAGGGT	NA	False	NA	NA	False	NA	NA	NA	64460407	64438890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ENSMUSG00000021482.11_64439641_64460407_1	chr13	-	864	6	FSM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	117	2030	0	0	multi-exon	FALSE	canonical	3	150	junction_1	21.3672646822189	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAGGGGGCGCTAGAA	NA	False	NA	NA	False	AATAAA	-21	NA	64460407	64439640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ENSMUSG00000021483.9_64580169_64587535_1	chr13	+	2025	8	FSM	ENSMUSG00000021483.9	ENSMUST00000021939.8	4118	8	41	2052	0	1	multi-exon	TRUE	canonical	3	37	junction_1	3.65892813567591	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTTGTGTTTTATTTC	NA	False	NA	16	True	AATAAA	-16	NA	64580168	64587535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64584579_64584643_64585202_64585327_64585690_64585847_64586594
ENSMUSG00000021483.9_64580356_64587535_1	chr13	+	1838	8	FSM	ENSMUSG00000021483.9	ENSMUST00000021939.8	4118	8	228	2052	0	1	multi-exon	FALSE	canonical	3	37	junction_1	3.65892813567591	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTTGTGTTTTATTTC	NA	False	NA	16	True	AATAAA	-16	NA	64580355	64587535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64584579_64584643_64585202_64585327_64585690_64585847_64586594
ENSMUSG00000021484.9_55493208_55510432_1	chr13	-	2589	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	164	1562	-8	1198	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGGCTGATGGTCTCTG	3003	False	NA	1	True	AATAAA	-18	NA	55510432	55493207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ENSMUSG00000021484.9_55494558_55510432_1	chr13	-	1162	9	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	-8	-152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	806.958177354936	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTCTTGCCCAGCTG	3003	False	NA	-6	True	ATTAAA	-14	NA	55510432	55494557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200_55510314_55510390
ENSMUSG00000021484.9_55494558_55510432_2	chr13	-	1234	8	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	-8	-152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	853.44327788754	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTCTTGCCCAGCTG	3003	False	NA	-6	True	ATTAAA	-14	NA	55510432	55494557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_55494851_55496127_55496248_55498973_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ENSMUSG00000021484.9_55494558_55510432_3	chr13	-	1239	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	164	2912	-8	-152	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	2179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTCTTGCCCAGCTG	3003	False	NA	-6	True	ATTAAA	-14	NA	55510432	55494557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ENSMUSG00000021484.9_55494558_55510629_1	chr13	-	1436	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	-33	2912	-33	-152	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTCTTGCCCAGCTG	2806	False	NA	-6	True	ATTAAA	-14	NA	55510629	55494557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ENSMUSG00000021485.15_55469832_55473085_1	chr13	-	1102	4	NNC	ENSMUSG00000021485.15	novel	1327	6	NA	NA	4080	3149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCGGATGCATAGGATCG	9708	False	NA	NA	False	NA	NA	NA	55473085	55469831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_55470095_55470665_55470892_55472143_55472258_55472586
ENSMUSG00000021485.15_55469832_55473085_2	chr13	-	1161	5	NNC	ENSMUSG00000021485.15	novel	1327	6	NA	NA	4080	3149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCGGATGCATAGGATCG	9708	False	NA	NA	False	NA	NA	NA	55473085	55469831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472606
ENSMUSG00000021485.15_55469832_55473085_3	chr13	-	1116	5	NNC	ENSMUSG00000021485.15	novel	1327	6	NA	NA	4080	3149	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCGGATGCATAGGATCG	9708	False	NA	NA	False	NA	NA	NA	55473085	55469831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_55470095_55470665_55470892_55472152_55472258_55472339_55472419_55472642
ENSMUSG00000021485.15_55469832_55473085_5	chr13	-	1120	5	NNC	ENSMUSG00000021485.15	novel	1327	6	NA	NA	4080	3149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5960	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCGGATGCATAGGATCG	9708	False	NA	NA	False	NA	NA	NA	55473085	55469831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472647
ENSMUSG00000021485.15_55473300_55477584_2	chr13	-	991	5	NIC	ENSMUSG00000021485.15	novel	1327	6	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	39.2006058626649	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTAAGTTCCTGTCCAT	6142	False	NA	-8	True	ATTAAA	-7	NA	55477584	55473299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_55473712_55473825_55474010_55476182_55476298_55477081_55477188_55477410
ENSMUSG00000021485.15_55473300_55477584_3	chr13	-	1021	6	FSM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	-13	319	-13	0	multi-exon	FALSE	canonical	3	87	junction_2	5.62138772902208	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTAAGTTCCTGTCCAT	6142	False	NA	-8	True	ATTAAA	-7	NA	55477584	55473299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081_55477188_55477410
ENSMUSG00000021486.8_55469832_55472838_1	chr13	+	878	5	FSM	ENSMUSG00000021486.8	ENSMUST00000021942.8	2644	5	1519	247	0	-244	multi-exon	FALSE	canonical	3	1299	junction_2	62.1248742453456	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTCTGCTGTCTGGGG	5553	False	NA	NA	False	ATTAAA	-13	NA	55469831	55472838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472642
ENSMUSG00000021486.8_55469832_55473085_1	chr13	+	1125	5	FSM	ENSMUSG00000021486.8	ENSMUST00000021942.8	2644	5	1519	0	0	0	multi-exon	FALSE	canonical	3	1299	junction_2	62.1248742453456	7007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	5553	False	NA	18	True	NA	NA	NA	55469831	55473085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472642
ENSMUSG00000021486.8_55469832_55473085_2	chr13	+	848	5	NNC	ENSMUSG00000021486.8	novel	2644	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	589.272591845234	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	5553	False	NA	18	True	NA	NA	NA	55469831	55473085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_55469888_55470735_55470892_55472143_55472258_55472339_55472419_55472642
ENSMUSG00000021488.9_55358234_55394317_1	chr13	+	1614	6	NNC	ENSMUSG00000021488.9	novel	9905	21	NA	NA	-314	5657	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	95.0970031073535	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAATTTAGGAATGATGG	NA	False	NA	NA	False	NA	NA	NA	55358233	55394317	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_55358348_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330
ENSMUSG00000021488.9_55359632_55388662_1	chr13	+	846	6	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	108.536445491825	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTCTTTTTTTTCCC	NA	False	NA	NA	False	AATACA	-17	NA	55359631	55388662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55388354
ENSMUSG00000021488.9_55359632_55394317_1	chr13	+	2425	5	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	0	5657	intron_retention	FALSE	canonical	3	116	junction_1	60.3386277603328	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAATTTAGGAATGATGG	NA	False	NA	NA	False	NA	NA	NA	55359631	55394317	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_55359814_55361016_55361964_55381707_55381844_55386502_55386676_55393330
ENSMUSG00000021488.9_55359632_55394317_2	chr13	+	1525	6	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	0	5657	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	88.3583612342375	428	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAATTTAGGAATGATGG	NA	False	NA	NA	False	NA	NA	NA	55359631	55394317	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330
ENSMUSG00000021488.9_55359888_55394317_1	chr13	+	1533	6	NIC	ENSMUSG00000021488.9	novel	852	6	NA	NA	0	5657	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	97.0805850827033	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAATTTAGGAATGATGG	NA	False	NA	NA	False	NA	NA	NA	55359887	55394317	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_55359921_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330
ENSMUSG00000021488.9_55443890_55460668_1	chr13	+	1807	8	ISM	ENSMUSG00000021488.9	ENSMUST00000224973.2	9905	21	86295	2900	5109	-2900	3prime_fragment	FALSE	canonical	3	160	junction_7	36.0390944188476	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTTCTGACAGGCCCCC	NA	False	NA	NA	False	NA	NA	NA	55443889	55460668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_+_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ENSMUSG00000021494.10_55678223_55684346_1	chr13	-	2080	17	FSM	ENSMUSG00000021494.10	ENSMUST00000021956.9	2205	17	125	0	-12	0	multi-exon	FALSE	canonical	3	642	junction_9	44.9861089671023	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCTCTCACCCACCTG	NA	False	NA	1	True	ATTAAA	-27	NA	55684346	55678222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ENSMUSG00000021494.10_55678480_55684346_1	chr13	-	1823	17	FSM	ENSMUSG00000021494.10	ENSMUST00000224765.2	2199	17	125	251	-12	-251	multi-exon	FALSE	canonical	3	642	junction_9	44.9861089671023	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGCAGACCAAGCAGGT	NA	False	NA	NA	False	NA	NA	NA	55684346	55678479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ENSMUSG00000021500.18_55782840_55795546_1	chr13	+	706	5	ISM	ENSMUSG00000021500.18	ENSMUST00000224551.2	4056	16	-1	22117	0	-22117	5prime_fragment	FALSE	canonical	3	304	junction_4	29.0903764155777	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGGAGATTGAGGAGA	NA	False	NA	NA	False	NA	NA	NA	55782839	55795546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439
ENSMUSG00000021500.18_55782840_55826786_1	chr13	+	3393	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	0	2283	0	-2283	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCCATCCAAAACCATCTA	NA	False	NA	NA	False	AAGAAA	-41	NA	55782839	55826786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ENSMUSG00000021500.18_55782840_55826928_2	chr13	+	3535	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	0	2141	0	-2141	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCACTGACCTGTCCTTT	NA	False	NA	8	True	AATAAA	-17	NA	55782839	55826928	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ENSMUSG00000021500.18_55782840_55827166_1	chr13	+	3773	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	0	1903	0	-1903	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCATTTCTTTTTTAT	NA	False	NA	15	True	ATTAAA	-20	NA	55782839	55827166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ENSMUSG00000021504.15_55747878_55757708_1	chr13	+	1583	6	FSM	ENSMUSG00000021504.15	ENSMUST00000064701.8	2130	6	0	547	0	-547	multi-exon	FALSE	canonical	3	87	junction_4	8.85437744847146	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAATGCTGGATTCTTTT	NA	False	NA	NA	False	AAGAAA	-1	NA	55747877	55757708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
ENSMUSG00000021509.6_56586168_56619720_1	chr13	+	1820	8	NNC	ENSMUSG00000021509.6	novel	3374	8	NA	NA	0	-2332	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_7	4.23300925429402	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGTGTTTTTGCGTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	56586167	56619720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162_56618294_56618964
ENSMUSG00000021514.19_65426666_65443958_1	chr13	+	1220	8	FSM	ENSMUSG00000021514.19	ENSMUST00000126879.8	2909	8	38	1651	0	-1651	multi-exon	FALSE	canonical	3	28	junction_1	11.5564276663752	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATCTCTCGAGGAATC	NA	False	NA	NA	False	NA	NA	NA	65426665	65443958	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65443876
ENSMUSG00000021518.5_67060182_67081105_1	chr13	+	1432	8	NIC	ENSMUSG00000021518.5	novel	3424	13	NA	NA	-20712	-30327	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGATACGGTGCACCGTAG	NA	False	NA	NA	False	NA	NA	NA	67060181	67081105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ENSMUSG00000021518.5_67060182_67081105_2	chr13	+	1427	8	NIC	ENSMUSG00000021518.5	novel	3424	13	NA	NA	-20712	-30327	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGATACGGTGCACCGTAG	NA	False	NA	NA	False	NA	NA	NA	67060181	67081105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_67060443_67062690_67062853_67064676_67064749_67065089_67065233_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ENSMUSG00000021518.5_67060182_67081105_3	chr13	+	1397	8	NIC	ENSMUSG00000021518.5	novel	3424	13	NA	NA	-20712	-30327	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGATACGGTGCACCGTAG	NA	False	NA	NA	False	NA	NA	NA	67060181	67081105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076352_67077948_67078288_67080998
ENSMUSG00000021518.5_67060182_67081105_4	chr13	+	1284	7	NIC	ENSMUSG00000021518.5	novel	3424	13	NA	NA	-20712	-30327	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGATACGGTGCACCGTAG	NA	False	NA	NA	False	NA	NA	NA	67060181	67081105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_67060443_67062690_67062853_67064676_67064749_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ENSMUSG00000021518.5_67081512_67146073_1	chr13	+	2414	13	FSM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	618	392	0	-117	multi-exon	FALSE	canonical	3	153	junction_7	19.2476549798209	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTTTGTTAGAATGAT	8476	False	NA	29	True	ATTAAA	-15	NA	67081511	67146073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
ENSMUSG00000021519.12_67055032_67081105_1	chr13	-	1387	8	NIC	ENSMUSG00000021519.12	novel	784	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	116.048898912379	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTATGTATCAGCAACTA	424	False	NA	NA	False	AATAAA	-18	NA	67081105	67055031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_67055248_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ENSMUSG00000021519.12_67060182_67081105_1	chr13	-	1432	8	NNC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	125.19209729248	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGTTTCAATATTA	424	False	NA	NA	False	AATAAA	-18	NA	67081105	67060181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065233_67070814_67071010_67076233_67076387_67077948_67078288_67080998
ENSMUSG00000021519.12_67060301_67081105_1	chr13	-	1313	8	FSM	ENSMUSG00000021519.12	ENSMUST00000021991.11	1479	8	47	119	0	0	multi-exon	FALSE	canonical	3	328	junction_6	16.4005973012185	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTGCCAAAGCTTCACTA	424	False	NA	NA	False	GATAAA	-14	NA	67081105	67060300	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ENSMUSG00000021532.12_68730365_68740401_1	chr13	+	2615	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	39.5010548382361	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAATTGTCCGTCTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	68730364	68740401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_68730718_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
ENSMUSG00000021537.10_81931397_81945038_1	chr13	+	780	5	NNC	ENSMUSG00000021537.10	novel	1226	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	582.483690758806	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTGTATGTTATTT	NA	False	NA	24	True	TATAAA	-17	NA	81931396	81945038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944781
ENSMUSG00000021537.10_81931397_81945153_1	chr13	+	904	5	FSM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	201	121	0	118	multi-exon	FALSE	canonical	3	1314	junction_2	32.392128673491	4035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGTTTGGTAAATTT	NA	False	NA	8	True	AATAAA	-19	NA	81931396	81945153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944772
ENSMUSG00000021537.10_81931397_81945274_1	chr13	+	1025	5	FSM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	201	0	0	0	multi-exon	FALSE	canonical	3	1314	junction_2	32.392128673491	4453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAATAGTCTGGAACATT	NA	False	NA	NA	False	AATAAA	-15	NA	81931396	81945274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944772
ENSMUSG00000021546.19_58539053_58549955_1	chr13	-	2643	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2835.66444090773	1703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5126	False	NA	-23	True	AATAAA	-15	NA	58549955	58539052	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542292_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ENSMUSG00000021546.19_58539053_58550279_1	chr13	-	2628	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1994.19465229062	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4802	False	NA	-23	True	AATAAA	-15	NA	58550279	58539052	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021546.19_58539764_58549384_1	chr13	-	1951	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2561.53390449503	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5697	False	NA	-5	True	AATAAA	-14	NA	58549384	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549348
ENSMUSG00000021546.19_58539764_58549384_2	chr13	-	1950	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2984.2516077173	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5697	False	NA	-5	True	AATAAA	-14	NA	58549384	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542292_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549348
ENSMUSG00000021546.19_58539764_58549384_3	chr13	-	1891	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2591.04449429734	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5697	False	NA	-5	True	AATAAA	-14	NA	58549384	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549348
ENSMUSG00000021546.19_58539764_58549955_1	chr13	-	1932	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2835.66444090773	1193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5126	False	NA	-5	True	AATAAA	-14	NA	58549955	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542292_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ENSMUSG00000021546.19_58539764_58549955_2	chr13	-	1918	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	2386.06576110688	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5126	False	NA	-5	True	AATAAA	-14	NA	58549955	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540231_58541009_58541180_58541505_58541574_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ENSMUSG00000021546.19_58539764_58549955_3	chr13	-	1949	14	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2751.08029561105	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5126	False	NA	-5	True	AATAAA	-14	NA	58549955	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ENSMUSG00000021546.19_58539764_58550279_1	chr13	-	1983	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	2556.0090662865	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4802	False	NA	-5	True	AATAAA	-14	NA	58550279	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544065_58544636_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021546.19_58539764_58550279_2	chr13	-	418	4	NNC	ENSMUSG00000021546.19	novel	2653	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3259.47889495647	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4802	False	NA	-5	True	AATAAA	-14	NA	58550279	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58539956_58547736_58547805_58548146_58548232_58550206
ENSMUSG00000021546.19_58539764_58550279_3	chr13	-	1923	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2586.84150252459	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4802	False	NA	-5	True	AATAAA	-14	NA	58550279	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542296_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021546.19_58539764_58550279_5	chr13	-	1919	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2522.99785342107	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4802	False	NA	-5	True	AATAAA	-14	NA	58550279	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548155_58548232_58550206
ENSMUSG00000021546.19_58539764_58550279_6	chr13	-	1978	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2920.33561811806	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4802	False	NA	-5	True	AATAAA	-14	NA	58550279	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542292_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548155_58548232_58550206
ENSMUSG00000021546.19_58539764_58550330_1	chr13	-	1968	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1994.19465229062	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021546.19_58539764_58550330_3	chr13	-	2036	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2567.05623114835	959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543390_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021546.19_58539764_58550330_4	chr13	-	1974	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	2584.00916647929	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544065_58544636_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021546.19_58539764_58550330_5	chr13	-	2037	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2514.64958405982	980	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545568_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021546.19_58539764_58550330_6	chr13	-	2037	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	2567.73979863019	700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544003_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021546.19_58539764_58550330_7	chr13	-	2024	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	1938.93086992996	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541574_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021546.19_58539764_58550330_8	chr13	-	2027	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2563.94689365232	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542292_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021546.19_58539764_58550330_9	chr13	-	2034	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2561.04802069108	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542128_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021546.19_58541505_58550330_1	chr13	-	1342	13	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2753.67144312219	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTATTTTTAATTTAGAG	4751	False	NA	NA	False	NA	NA	NA	58550330	58541504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_58541589_58541873_58541974_58542123_58542179_58542292_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021546.19_58545652_58550316_1	chr13	-	1668	4	FSM	ENSMUSG00000021546.19	ENSMUST00000175939.2	780	4	0	-888	0	-801	multi-exon	FALSE	canonical	3	6496	junction_3	612.864494720398	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCAATGCCAACATCCAC	4765	False	NA	NA	False	NA	NA	NA	58550316	58545651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021548.11_85337567_85361029_1	chr13	+	1012	9	NIC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	310.456921327259	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTGATTGTTTTA	NA	False	NA	15	True	ATTAAA	-22	NA	85337566	85361029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345649_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ENSMUSG00000021548.11_85337567_85361029_2	chr13	+	1192	9	FSM	ENSMUSG00000021548.11	ENSMUST00000022030.11	2045	9	40	813	0	0	multi-exon	FALSE	canonical	3	824	junction_5	83.2840583485219	3540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTGATTGTTTTA	NA	False	NA	15	True	ATTAAA	-22	NA	85337566	85361029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ENSMUSG00000021552.8_58381160_58412013_1	chr13	-	1408	11	ISM	ENSMUSG00000021552.8	ENSMUST00000091579.6	1523	12	9989	0	-221	0	3prime_fragment	FALSE	canonical	0	0	junction_5	57.4272583360898	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGATCTTCACTGTC	NA	False	NA	2	True	AATAAA	-22	NA	58412013	58381159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755
ENSMUSG00000021555.16_59733208_59747651_1	chr13	+	453	5	ISM	ENSMUSG00000021555.16	ENSMUST00000166923.9	779	10	0	8980	0	47	5prime_fragment	FALSE	canonical	3	670	junction_1	98.3234458305851	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCCTACCTGATTCTT	1309	False	NA	NA	False	AATAAA	-23	NA	59733207	59747651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542
ENSMUSG00000021555.16_59733208_59782612_1	chr13	+	2570	23	FSM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	99	1124	0	46	multi-exon	FALSE	canonical	3	649	junction_6	70.4314478267713	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1309	False	NA	67	True	AATAAA	-29	NA	59733207	59782612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ENSMUSG00000021555.16_59733234_59734460_1	chr13	+	381	3	NNC	ENSMUSG00000021555.16	novel	2051	8	NA	NA	0	-13144	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	328.5	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGATGTTGGCGATTTTT	1335	False	NA	NA	False	TTTAAA	-1	NA	59733233	59734460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_59733274_59733966_59734096_59734248
ENSMUSG00000021556.13_59733208_59782612_1	chr13	-	2486	22	NIC	ENSMUSG00000021556.13	novel	3954	10	NA	NA	40974	49232	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGCCCCGCCGGCCGCGTG	NA	False	NA	NA	False	NA	NA	NA	59782612	59733207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ENSMUSG00000021556.13_59782810_59823597_2	chr13	-	3556	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	28	370	-3	0	multi-exon	FALSE	canonical	3	421	junction_9	46.3947102135844	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823597	59782809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ENSMUSG00000021556.13_59784396_59823597_1	chr13	-	1970	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	28	1956	-3	-1586	multi-exon	FALSE	canonical	3	421	junction_9	46.3947102135844	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTATGGTCTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	59823597	59784395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ENSMUSG00000021556.13_59784985_59823597_1	chr13	-	1381	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	28	2545	-3	-2175	multi-exon	FALSE	canonical	3	421	junction_9	46.3947102135844	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTTGGGGGTACTTTT	NA	False	NA	-3	True	AAGAAA	-20	NA	59823597	59784984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ENSMUSG00000021569.11_74060577_74085903_1	chr13	-	2288	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	0	1111	0	0	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTATTTTTATTCTAA	NA	False	NA	-20	True	ATTAAA	-14	NA	74085903	74060576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ENSMUSG00000021569.11_74060577_74085903_2	chr13	-	2280	13	NNC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	138.997302132092	743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTATTTTTATTCTAA	NA	False	NA	-20	True	ATTAAA	-14	NA	74085903	74060576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_74061451_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ENSMUSG00000021572.10_74185751_74210418_1	chr13	-	2332	12	NNC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	30.6737026303942	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	1	True	NA	NA	NA	74210418	74185750	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198355_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ENSMUSG00000021572.10_74185751_74210418_3	chr13	-	2269	12	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	25.7267908724551	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	1	True	NA	NA	NA	74210418	74185750	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198418_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ENSMUSG00000021576.7_74451636_74465403_1	chr13	-	1139	7	NNC	ENSMUSG00000021576.7	novel	1131	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	362.674670561189	3761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTAGTTTTGGCTGGT	NA	False	NA	-7	True	AATAAA	-17	NA	74465403	74451635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_74452168_74453072_74453126_74453659_74453770_74457802_74457962_74459786_74459832_74464448_74464511_74465225
ENSMUSG00000021577.15_74486869_74498358_1	chr13	-	949	5	ISM	ENSMUSG00000021577.15	ENSMUST00000160667.8	521	6	-37	1268	0	0	5prime_fragment	FALSE	canonical	3	1612	junction_1	108.845073384145	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGGTATGGTACCACAC	NA	False	NA	NA	False	NA	NA	NA	74498358	74486868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ENSMUSG00000021578.18_74498470_74505796_1	chr13	+	1411	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	42	8106	0	629	multi-exon	FALSE	canonical	3	416	junction_2	9.5	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGCTTTTTTTTTTT	4392	False	NA	31	True	TTTAAA	-6	NA	74498469	74505796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_74498528_74500974_74501106_74504574
ENSMUSG00000021578.18_74498470_74505959_1	chr13	+	1574	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	42	7943	0	792	multi-exon	FALSE	canonical	3	416	junction_2	9.5	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCGGGCATGGTATTACTT	4392	False	NA	NA	False	NA	NA	NA	74498469	74505959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_74498528_74500974_74501106_74504574
ENSMUSG00000021578.18_74498470_74507787_1	chr13	+	3402	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	42	6115	0	-1027	multi-exon	FALSE	canonical	3	416	junction_2	9.5	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGATGATTTGTTTCTCAA	4392	False	NA	10	True	AATAAA	-21	NA	74498469	74507787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_74498528_74500974_74501106_74504574
ENSMUSG00000021585.11_74842374_74956740_2	chr13	-	3008	31	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-100	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_30	28.2737609022138	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTGCCTGAACTCTAC	NA	False	NA	NA	False	AATAAA	-45	NA	74956740	74842373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ENSMUSG00000021591.9_75988029_75998270_1	chr13	+	1159	4	NNC	ENSMUSG00000021591.9	novel	1345	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	143.431749158499	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTGTCCGGTTCTGT	NA	False	NA	30	True	ATTAAA	-22	NA	75988028	75998270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_75988295_75995288_75995418_75997362_75997902_75998045
ENSMUSG00000021591.9_75988195_75998270_1	chr13	+	1137	3	FSM	ENSMUSG00000021591.9	ENSMUST00000022082.8	1345	3	208	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	16	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTGTCCGGTTCTGT	NA	False	NA	30	True	ATTAAA	-22	NA	75988194	75998270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_75988295_75995288_75995418_75997362
ENSMUSG00000021607.10_73476632_73480297_1	chr13	+	1159	3	FSM	ENSMUSG00000021607.10	ENSMUST00000221730.2	717	3	0	-442	0	0	multi-exon	FALSE	canonical	3	17	junction_1	303	3742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGAGTAGTAGTGTTCT	9283	False	NA	13	True	ATTAAA	-26	NA	73476631	73480297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_73476740_73478978_73479211_73479478
ENSMUSG00000021607.10_73479145_73479878_1	chr13	+	466	2	FSM	ENSMUSG00000021607.10	ENSMUST00000022098.10	923	2	38	419	0	23	multi-exon	FALSE	canonical	3	623	junction_1	0	1713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGGGCCTTAGGGCTTT	NA	False	NA	20	True	AATAAA	-20	NA	73479144	73479878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_73479211_73479478
ENSMUSG00000021614.17_89873194_89890628_1	chr13	-	1102	3	ISM	ENSMUSG00000021614.17	ENSMUST00000159337.8	2273	6	-191	13849	0	359	5prime_fragment	TRUE	canonical	3	54	junction_2	6.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGAAAACCTCAAGACAT	2606	False	NA	NA	False	AATAAA	-18	NA	89890628	89873193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_89873783_89879577_89879654_89890191
ENSMUSG00000021619.7_91083475_91365974_1	chr13	-	1675	8	NNC	ENSMUSG00000021619.7	novel	1583	8	NA	NA	6104	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	7.14856914468389	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTGACTACTGTTACTT	4984	False	NA	NA	False	ATTAAA	-15	NA	91365974	91083474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91365852
ENSMUSG00000021619.7_91083988_91365974_1	chr13	-	1162	8	NNC	ENSMUSG00000021619.7	novel	1583	8	NA	NA	6104	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	7.14856914468389	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATGACACATCTTAAAT	4984	False	NA	NA	False	ATTAAA	-37	NA	91365974	91083987	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91365852
ENSMUSG00000021621.16_91944653_91955824_1	chr13	-	1471	5	NIC	ENSMUSG00000021621.16	novel	1541	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	56.3427013906859	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTGTTGAACTGATC	NA	False	NA	NA	False	AATAAA	-15	NA	91955824	91944652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_91945374_91948729_91948823_91948984_91949136_91953869_91954280_91955728
ENSMUSG00000021635.15_100753672_100787559_1	chr13	-	2711	17	FSM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	-4	-315	0	0	multi-exon	FALSE	canonical	3	174	junction_16	17.1335516968899	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	100787559	100753671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787457
ENSMUSG00000021635.15_100753794_100787559_1	chr13	-	2589	17	FSM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	-4	-193	0	0	multi-exon	FALSE	canonical	3	174	junction_16	17.1335516968899	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTACAGTTTGCATCTAG	NA	False	NA	-14	True	AATAAA	-11	NA	100787559	100753793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787457
ENSMUSG00000021638.13_100634271_100688968_1	chr13	-	2758	9	FSM	ENSMUSG00000021638.13	ENSMUST00000069756.11	4052	9	38	1256	0	0	multi-exon	FALSE	canonical	3	42	junction_8	12.8640730330638	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTCATTTGATGTCATT	NA	False	NA	NA	False	ATTAAA	-22	NA	100688968	100634270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688894
ENSMUSG00000021638.13_100634271_100688968_2	chr13	-	2729	9	NIC	ENSMUSG00000021638.13	novel	2839	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	21.5638586528478	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTCATTTGATGTCATT	NA	False	NA	NA	False	ATTAAA	-22	NA	100688968	100634270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688923
ENSMUSG00000021639.18_100596277_100629098_1	chr13	-	2002	17	NIC	ENSMUSG00000021639.18	novel	1630	18	NA	NA	-11	449	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	76.8251871133419	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTGTCTTCTTAAAACAA	NA	False	NA	NA	False	NA	NA	NA	100629098	100596276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_100596929_100605422_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ENSMUSG00000021639.18_100605202_100629098_1	chr13	-	1571	16	FSM	ENSMUSG00000021639.18	ENSMUST00000066984.14	1656	16	-29	114	-11	114	multi-exon	FALSE	canonical	3	225	junction_10	29.724213848122	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTTATTTTGAGCCA	NA	False	NA	-10	True	ATTAAA	-16	NA	100629098	100605201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ENSMUSG00000021639.18_100605316_100629098_1	chr13	-	1447	16	NNC	ENSMUSG00000021639.18	novel	1656	16	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	83.7426215655246	904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATGAAAGCACTTTGA	NA	False	NA	-19	True	AATAAA	-32	NA	100629098	100605315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619542_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ENSMUSG00000021639.18_100605316_100629098_3	chr13	-	1457	16	FSM	ENSMUSG00000021639.18	ENSMUST00000066984.14	1656	16	-29	228	-11	0	multi-exon	FALSE	canonical	3	225	junction_10	29.724213848122	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATGAAAGCACTTTGA	NA	False	NA	-19	True	AATAAA	-32	NA	100629098	100605315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ENSMUSG00000021646.10_100085038_100152147_1	chr13	-	2125	17	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	82.1161287065458	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGGTTGTTGAGATGG	669	False	NA	-3	True	AATAAA	-18	NA	100152147	100085037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126879_100127715_100127822_100130074_100130160_100136757_100136825_100151893
ENSMUSG00000021646.10_100085038_100152147_2	chr13	-	2028	17	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	51	junction_3	69.7078725826574	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGGTTGTTGAGATGG	669	False	NA	-3	True	AATAAA	-18	NA	100152147	100085037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091220_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ENSMUSG00000021646.10_100085161_100152147_1	chr13	-	2003	17	FSM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	0	120	0	-120	multi-exon	FALSE	canonical	2	186	junction_5	41.3428878405948	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTTACAGACATTT	669	False	NA	NA	False	TTTAAA	-7	NA	100152147	100085160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ENSMUSG00000021650.8_99479862_99481213_1	chr13	-	194	2	ISM	ENSMUSG00000021650.8	ENSMUST00000022153.8	1704	10	0	23707	0	-23707	5prime_fragment	FALSE	canonical	3	377	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGATAGCTATTGCAT	NA	False	NA	NA	False	NA	NA	NA	99481213	99479861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_99479914_99481071
ENSMUSG00000021660.15_98446450_98453488_1	chr13	-	817	6	FSM	ENSMUSG00000021660.15	ENSMUST00000152704.8	888	6	26	45	-13	0	multi-exon	FALSE	canonical	3	5972	junction_2	361.40138350593	7786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGAATAAAGTTTGGAAAG	NA	False	NA	-62	True	AATAAA	-13	NA	98453488	98446449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453373
ENSMUSG00000021665.10_97312839_97334803_1	chr13	-	1838	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	646.613920458087	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	False	NA	1	True	AATAAA	-27	NA	97334803	97312838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320310_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021665.10_97312839_97334865_1	chr13	-	1897	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	649.951905366805	1492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	False	NA	1	True	AATAAA	-27	NA	97334865	97312838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_97313098_97313304_97313410_97313563_97313647_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021665.10_97312839_97334865_2	chr13	-	1957	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	642.382869851999	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	False	NA	1	True	AATAAA	-27	NA	97334865	97312838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330577_97330776_97334533
ENSMUSG00000021665.10_97312839_97334865_3	chr13	-	1900	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	646.613920458087	3850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	False	NA	1	True	AATAAA	-27	NA	97334865	97312838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320310_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021665.10_97312839_97334865_4	chr13	-	1900	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_7	629.913472032882	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	False	NA	1	True	AATAAA	-27	NA	97334865	97312838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318517_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021665.10_97312839_97334865_5	chr13	-	2569	13	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	2035	junction_5	132.195877394115	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	False	NA	1	True	AATAAA	-27	NA	97334865	97312838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021665.10_97312839_97334865_6	chr13	-	1894	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	645.602832824856	1254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	False	NA	1	True	AATAAA	-27	NA	97334865	97312838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_97313087_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021665.10_97312839_97334865_7	chr13	-	1759	13	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_12	664.703750846111	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	False	NA	1	True	AATAAA	-27	NA	97334865	97312838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97334533
ENSMUSG00000021666.17_97274485_97312959_1	chr13	+	3125	21	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	43.0145033680502	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	AATAAA	-25	NA	97274484	97312959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ENSMUSG00000021666.17_97312839_97334803_1	chr13	+	1843	14	NIC	ENSMUSG00000021666.17	novel	2542	5	NA	NA	4882	17100	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTTCCAGTCTGGGT	NA	False	NA	NA	False	NA	NA	NA	97312838	97334803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021666.17_97312839_97334803_2	chr13	+	1837	14	NNC	ENSMUSG00000021666.17	novel	2542	5	NA	NA	4882	17100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	618	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTTCCAGTCTGGGT	NA	False	NA	NA	False	NA	NA	NA	97312838	97334803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_97313098_97313304_97313410_97313563_97313655_97314387_97314557_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021666.17_97312839_97334865_1	chr13	+	1899	14	NNC	ENSMUSG00000021666.17	novel	2542	5	NA	NA	4882	17162	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGAGCTCCCCGCCCGGG	NA	False	NA	NA	False	AAGAAA	-30	NA	97312838	97334865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315857_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021666.17_97312839_97334865_2	chr13	+	1899	14	NNC	ENSMUSG00000021666.17	novel	2542	5	NA	NA	4882	17162	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1873	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGAGCTCCCCGCCCGGG	NA	False	NA	NA	False	AAGAAA	-30	NA	97312838	97334865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325855_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021666.17_97312839_97334865_3	chr13	+	1907	14	NNC	ENSMUSG00000021666.17	novel	2542	5	NA	NA	4882	17162	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGAGCTCCCCGCCCGGG	NA	False	NA	NA	False	AAGAAA	-30	NA	97312838	97334865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318517_97320177_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021666.17_97312839_97334865_4	chr13	+	1897	14	NNC	ENSMUSG00000021666.17	novel	2542	5	NA	NA	4882	17162	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1043	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGAGCTCCCCGCCCGGG	NA	False	NA	NA	False	AAGAAA	-30	NA	97312838	97334865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_97313098_97313304_97313402_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021666.17_97312839_97334865_5	chr13	+	1896	14	NNC	ENSMUSG00000021666.17	novel	2542	5	NA	NA	4882	17162	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1838	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGAGCTCCCCGCCCGGG	NA	False	NA	NA	False	AAGAAA	-30	NA	97312838	97334865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334542
ENSMUSG00000021666.17_97312839_97334865_6	chr13	+	1899	14	NNC	ENSMUSG00000021666.17	novel	2542	5	NA	NA	4882	17162	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGAGCTCCCCGCCCGGG	NA	False	NA	NA	False	AAGAAA	-30	NA	97312838	97334865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_97313098_97313304_97313410_97313563_97313655_97314387_97314557_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021666.17_97312839_97334865_7	chr13	+	1900	14	NNC	ENSMUSG00000021666.17	novel	2542	5	NA	NA	4882	17162	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGAGCTCCCCGCCCGGG	NA	False	NA	NA	False	AAGAAA	-30	NA	97312838	97334865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_97313098_97313309_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021670.15_96785842_96807369_1	chr13	-	3983	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	75	367	-13	-367	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGCTTCAAGTTTGGT	NA	False	NA	-2	True	AATAAA	-23	NA	96807369	96785841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ENSMUSG00000021686.7_94495468_94702722_1	chr13	+	3918	27	FSM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	0	103	0	-99	multi-exon	FALSE	canonical	3	310	junction_8	45.9393251760748	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATTCTTTGATTTTCCT	NA	False	NA	21	True	AATAAA	-26	NA	94495467	94702722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ENSMUSG00000021692.10_107083663_107095294_2	chr13	+	952	10	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	0	-974	combination_of_known_splicesites	TRUE	canonical	3	22	junction_8	191.021296724918	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATTTAAATTATTTAAT	NA	False	NA	NA	False	AATACA	-21	NA	107083662	107095294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107093601_107093709_107095162
ENSMUSG00000021692.10_107083663_107095428_3	chr13	+	1193	12	NNC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	0	-840	at_least_one_novel_splicesite	TRUE	canonical	2	7	junction_6	181.63499862987	2408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	NA	False	NA	15	True	NA	NA	NA	107083662	107095428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088347_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ENSMUSG00000021692.10_107083663_107095428_4	chr13	+	1290	11	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	0	-840	intron_retention	FALSE	canonical	3	551	junction_5	39.2372272210971	2496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	NA	False	NA	15	True	NA	NA	NA	107083662	107095428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ENSMUSG00000021692.10_107083663_107095428_6	chr13	+	1086	10	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	0	-840	combination_of_known_splicesites	FALSE	canonical	3	22	junction_8	191.021296724918	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	NA	False	NA	15	True	NA	NA	NA	107083662	107095428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107093601_107093709_107095162
ENSMUSG00000021693.21_107083663_107096268_2	chr13	-	2055	12	NIC	ENSMUSG00000021693.21	novel	5304	20	NA	NA	17358	11841	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCGCCCTCAGTCGCCGT	NA	False	NA	NA	False	NA	NA	NA	107096268	107083662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ENSMUSG00000021693.21_107098360_107158535_1	chr13	-	2357	20	FSM	ENSMUSG00000021693.21	ENSMUST00000022204.16	5304	20	91	2856	0	0	multi-exon	FALSE	canonical	3	48	junction_15	23.883141169724	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTTGCCAATTTTATT	NA	False	NA	-2	True	AATAAA	-17	NA	107158535	107098359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ENSMUSG00000021694.19_108295272_108331047_1	chr13	+	1639	12	FSM	ENSMUSG00000021694.19	ENSMUST00000054835.15	2111	12	0	472	0	-464	multi-exon	FALSE	canonical	3	49	junction_3	12.8281714780819	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAACTTGTCTCCTTGAG	NA	False	NA	12	True	AATATA	-21	NA	108295271	108331047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ENSMUSG00000021696.10_108350944_108419241_2	chr13	+	1031	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	6	2976	0	-1366	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGACTGATATCTTGCCT	NA	False	NA	6	True	AATACA	-21	NA	108350943	108419241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ENSMUSG00000021696.10_108350944_108420000_1	chr13	+	1790	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	6	2217	0	-607	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTTGGATTCAATGAGG	NA	False	NA	7	True	AATAAA	-14	NA	108350943	108420000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ENSMUSG00000021696.10_108350944_108420273_1	chr13	+	2063	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	6	1944	0	-334	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAGACACTGAATTATG	NA	False	NA	NA	False	AATAAA	-23	NA	108350943	108420273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ENSMUSG00000021707.6_92491654_92521391_1	chr13	+	757	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	420	4170	420	-4170	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	2417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTATGAGTAATTATTTC	NA	False	NA	27	True	NA	NA	NA	92491653	92521391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ENSMUSG00000021707.6_92491654_92521826_1	chr13	+	1192	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	420	3735	420	-3735	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	3580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGACTGGATTATTGTA	NA	False	NA	11	True	TATAAA	-16	NA	92491653	92521826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ENSMUSG00000021707.6_92491654_92522192_1	chr13	+	1558	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	420	3369	420	-3369	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	4982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTCCTCATCTCAGCA	NA	False	NA	14	True	AATAAA	-17	NA	92491653	92522192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ENSMUSG00000021710.12_104161203_104246094_1	chr13	-	2496	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	28	1638	0	-110	multi-exon	FALSE	canonical	3	279	junction_1	22.4276614920058	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCATATGACTGTAATTT	NA	False	NA	-15	True	TATAAA	-37	NA	104246094	104161202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ENSMUSG00000021711.18_104279825_104314931_1	chr13	-	2324	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	46	1168	0	0	multi-exon	FALSE	canonical	3	331	junction_5	157.730704704606	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGATTTTTTTCTTTC	NA	False	NA	-2	True	AATAAA	-42	NA	104314931	104279824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUSG00000021711.18_104280462_104314683_1	chr13	-	1439	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	294	1805	232	0	multi-exon	FALSE	canonical	3	331	junction_5	157.730704704606	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACATTTCTTTATTT	NA	False	NA	22	True	AAAACA	-33	NA	104314683	104280461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUSG00000021711.18_104280462_104314931_1	chr13	-	1687	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	46	1805	0	0	multi-exon	FALSE	canonical	3	331	junction_5	157.730704704606	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACATTTCTTTATTT	NA	False	NA	22	True	AAAACA	-33	NA	104314931	104280461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUSG00000021711.18_104280462_104314931_2	chr13	-	1702	13	FSM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	2	1798	0	0	multi-exon	FALSE	canonical	3	258	junction_6	206.169209766045	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACATTTCTTTATTT	NA	False	NA	22	True	AAAACA	-33	NA	104314931	104280461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUSG00000021712.16_104315347_104339358_1	chr13	+	3207	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	42	167	0	-167	multi-exon	FALSE	canonical	3	141	junction_1	34.1	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAGACTTTGAATTGT	NA	False	NA	3	True	AATAAA	-14	NA	104315346	104339358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ENSMUSG00000021712.16_104315347_104339884_1	chr13	+	3733	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	42	-359	0	4	multi-exon	FALSE	canonical	3	141	junction_1	34.1	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTTGTTATTCTAAAAAT	NA	False	NA	6	True	AATAAA	-16	NA	104315346	104339884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ENSMUSG00000021713.10_104341632_104344543_1	chr13	-	746	3	ISM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	20787	0	20731	0	3prime_fragment	FALSE	canonical	3	331	junction_2	10	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATACGTGTCAAATGAC	NA	False	NA	-13	True	TATAAA	-11	NA	104344543	104341631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_104342156_104343606_104343790_104344504
ENSMUSG00000021714.16_104341887_104365330_1	chr13	+	2087	11	NIC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	-23232	-2220	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGCGACGACCGAGTGAAC	NA	False	NA	NA	False	NA	NA	NA	104341886	104365330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
ENSMUSG00000021714.16_104342063_104365330_1	chr13	+	1911	11	NIC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	-23056	-2220	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGCGACGACCGAGTGAAC	NA	False	NA	NA	False	NA	NA	NA	104342062	104365330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
ENSMUSG00000021714.16_104365463_104386125_1	chr13	+	996	10	NIC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	409	junction_5	30.3205101100449	1424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATAGTTTGTCTTTGTT	NA	False	NA	10	True	AATAAA	-21	NA	104365462	104386125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
ENSMUSG00000021715.13_104767833_104953461_1	chr13	-	1886	14	FSM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	0	185	0	-185	multi-exon	FALSE	canonical	3	502	junction_8	84.1316241226496	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGCAGATTGCATTAG	NA	False	NA	-5	True	AATAAA	-29	NA	104953461	104767832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ENSMUSG00000021716.15_104767833_104953461_1	chr13	+	1895	14	NNC	ENSMUSG00000021716.15	novel	1443	5	NA	NA	-161159	-17316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGGGGGACTTCCCTGT	NA	False	NA	NA	False	NA	NA	NA	104767832	104953461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929168_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ENSMUSG00000021716.15_104767833_104953461_2	chr13	+	1672	12	NIC	ENSMUSG00000021716.15	novel	1443	5	NA	NA	-161159	-17316	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGGGGGACTTCCCTGT	NA	False	NA	NA	False	NA	NA	NA	104767832	104953461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_104768247_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ENSMUSG00000021716.15_104767833_104953461_3	chr13	+	1883	14	NNC	ENSMUSG00000021716.15	novel	1443	5	NA	NA	-161159	-17316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGGGGGACTTCCCTGT	NA	False	NA	NA	False	NA	NA	NA	104767832	104953461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941518_104943140_104943289_104944227_104944341_104947724_104947822_104953194
ENSMUSG00000021716.15_104767833_104953650_1	chr13	+	1787	15	NNC	ENSMUSG00000021716.15	novel	1443	5	NA	NA	-161159	-17127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCTCCGCGGTAGGACA	NA	False	NA	NA	False	NA	NA	NA	104767832	104953650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194_104953331_104953618
ENSMUSG00000021716.15_104953747_104974871_1	chr13	+	1392	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	62	911	0	3	multi-exon	FALSE	canonical	3	138	junction_4	17.2536228079786	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTGTATATGATGCCTA	NA	False	NA	NA	False	ATTAAA	-17	NA	104953746	104974871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
ENSMUSG00000021716.15_104953747_104975177_1	chr13	+	1698	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	62	605	0	0	multi-exon	FALSE	canonical	3	138	junction_4	17.2536228079786	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTAAGTGTCTCTGAGGT	NA	False	NA	17	True	TATAAA	-27	NA	104953746	104975177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
ENSMUSG00000021748.10_14296836_14303545_1	chr14	+	1193	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	88	232	0	18	multi-exon	FALSE	canonical	3	2290	junction_6	170.664134819183	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGTGTCTGAACTGTAAG	NA	False	NA	5	True	CATAAA	-19	NA	14296835	14303545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ENSMUSG00000021748.10_14296836_14303777_1	chr14	+	1421	9	NNC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	834.7358770144	6598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	AATAAA	-16	NA	14296835	14303777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298539_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ENSMUSG00000021748.10_14296836_14303777_2	chr14	+	1444	10	NNC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_4	785.462936548478	6776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	AATAAA	-16	NA	14296835	14303777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298578_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ENSMUSG00000021752.15_14246210_14255480_1	chr14	-	1497	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	153	0	153	0	multi-exon	FALSE	canonical	3	225	junction_1	7.5	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGGTTGTATTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	14255480	14246209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_14247587_14249552_14249623_14255430
ENSMUSG00000021756.13_112600646_112639400_1	chr13	+	2248	16	ISM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	42	7220	0	-893	5prime_fragment	FALSE	canonical	3	298	junction_12	38.7588556189278	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGGTAAGATACTGTCT	NA	False	NA	NA	False	NA	NA	NA	112600645	112639400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324
ENSMUSG00000021756.13_112600646_112641934_1	chr13	+	3950	17	FSM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	42	4686	0	855	multi-exon	FALSE	canonical	3	291	junction_16	42.4389267065038	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGTCCCAGAACACAC	NA	False	NA	NA	False	NA	NA	NA	112600645	112641934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ENSMUSG00000021756.13_112600646_112643394_1	chr13	+	5410	17	FSM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	42	3226	0	0	multi-exon	FALSE	canonical	3	291	junction_16	42.4389267065038	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAATGTAGTGTAAGGC	NA	False	NA	35	True	AATAAA	-36	NA	112600645	112643394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ENSMUSG00000021759.15_112935755_113004428_1	chr13	+	1125	5	NNC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	-1571	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	139.925873232937	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTTGTAGTCAGTTGCAA	8066	False	NA	14	True	AATAAA	-29	NA	112935754	113004428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_112935912_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ENSMUSG00000021759.15_112937326_113004428_1	chr13	+	1595	6	FSM	ENSMUSG00000021759.15	ENSMUST00000070951.8	1272	6	-71	-252	0	0	multi-exon	FALSE	canonical	3	38	junction_1	139.137342219837	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTTGTAGTCAGTTGCAA	9637	False	NA	14	True	AATAAA	-29	NA	112937325	113004428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_112937801_112987936_112988089_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ENSMUSG00000021759.15_113004389_113063919_1	chr13	+	3232	27	NNC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	66992	59491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	797	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTACCCAAGAGGCCCCGC	NA	False	NA	NA	False	NA	NA	NA	113004388	113063919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054129_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ENSMUSG00000021759.15_113004389_113063919_2	chr13	+	3239	27	NIC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	66992	59491	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTACCCAAGAGGCCCCGC	NA	False	NA	NA	False	NA	NA	NA	113004388	113063919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ENSMUSG00000021764.9_114424331_114524616_2	chr13	-	1520	5	FSM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	178	0	0	0	multi-exon	FALSE	canonical	3	1521	junction_3	83.4187478927849	10213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCTGTTATGTTTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	114524616	114424330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114524494
ENSMUSG00000021764.9_114425184_114447234_1	chr13	-	415	3	NNC	ENSMUSG00000021764.9	novel	571	4	NA	NA	77351	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	800	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	9350	False	NA	-18	True	AATAAA	-19	NA	114447234	114425183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_114425403_114444352_114444427_114447112
ENSMUSG00000021764.9_114425184_114524616_1	chr13	-	593	4	FSM	ENSMUSG00000021764.9	ENSMUST00000232101.2	716	4	-30	153	0	0	multi-exon	FALSE	canonical	3	49	junction_1	693.907454604399	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	-18	True	AATAAA	-19	NA	114524616	114425183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_114425403_114453392_114453566_114487983_114488063_114524494
ENSMUSG00000021767.20_21531502_21675549_1	chr14	+	2082	7	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	0	-1245	combination_of_known_junctions	FALSE	canonical	3	106	junction_5	9.89949493661167	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCGTCGTAAAACTGAATT	NA	False	NA	NA	False	AAAAAG	-31	NA	21531501	21675549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900
ENSMUSG00000021767.20_21531502_21719606_1	chr14	+	4326	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	0	-1335	combination_of_known_junctions	FALSE	canonical	3	97	junction_7	37.2808177887771	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCGATCAGACTGCCAT	NA	False	NA	NA	False	NA	NA	NA	21531501	21719606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021767.20_21531502_21720338_1	chr14	+	5058	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	0	-603	combination_of_known_junctions	FALSE	canonical	3	97	junction_7	37.2808177887771	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAAGCTACCATGACCCC	NA	False	NA	NA	False	NA	NA	NA	21531501	21720338	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021771.15_21881337_21895587_1	chr14	+	1371	10	NIC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	28	junction_1	727.515406480623	740	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881336	21895587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_21881513_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUSG00000021771.15_21881634_21895587_1	chr14	+	926	9	NNC	ENSMUSG00000021771.15	novel	893	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	752.546177985112	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881633	21895587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890527_21895415
ENSMUSG00000021771.15_21881634_21895587_2	chr14	+	1181	10	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	737.345656584448	268	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881633	21895587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890602_21890638_21893949_21894008_21895213
ENSMUSG00000021771.15_21881634_21895587_3	chr14	+	1279	9	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	781.575012394844	609	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881633	21895587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887984_21888442_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUSG00000021771.15_21881634_21895587_4	chr14	+	1391	9	NIC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	2055	junction_4	145.16865191907	1140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881633	21895587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUSG00000021771.15_21881634_21895587_6	chr14	+	1291	10	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	723.804216076334	7122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881633	21895587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893955_21894008_21895213
ENSMUSG00000021771.15_21881634_21895587_7	chr14	+	1292	10	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	739.342350410898	7681	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881633	21895587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888463_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUSG00000021771.15_21881634_21895587_8	chr14	+	1284	10	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	738.147832227544	2694	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881633	21895587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_21881736_21881918_21881965_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUSG00000021771.15_21881634_21895765_1	chr14	+	1469	10	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	0	178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	723.804216076334	9768	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGGCTCACGTATGTGC	NA	False	NA	16	True	AATAAA	-15	NA	21881633	21895765	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893955_21894008_21895213
ENSMUSG00000021771.15_21881794_21895587_1	chr14	+	1320	9	ISM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	457	360	0	0	3prime_fragment	FALSE	canonical	3	2055	junction_3	147.721391054241	714	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881793	21895587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_+_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUSG00000021772.16_4137952_4186974_1	chr14	-	1197	6	NIC	ENSMUSG00000021772.16	novel	4598	4	NA	NA	11458	47741	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGGCCACTCGTGTCT	NA	False	NA	NA	False	NA	NA	NA	4186974	4137951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_4138010_4138657_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
ENSMUSG00000021772.16_4189259_4198432_1	chr14	-	904	4	FSM	ENSMUSG00000021772.16	ENSMUST00000132374.9	4598	4	128	3566	0	0	multi-exon	FALSE	canonical	3	85	junction_3	10.6144555520604	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATACCATGGGAACTCTT	NA	False	NA	-39	True	AATAAA	-14	NA	4198432	4189258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_4189750_4191150_4191393_4192889_4193001_4198372
ENSMUSG00000021772.16_4189259_4198560_1	chr14	-	1032	4	FSM	ENSMUSG00000021772.16	ENSMUST00000132374.9	4598	4	0	3566	0	0	multi-exon	FALSE	canonical	3	85	junction_3	10.6144555520604	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATACCATGGGAACTCTT	NA	False	NA	-39	True	AATAAA	-14	NA	4198560	4189258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_4189750_4191150_4191393_4192889_4193001_4198372
ENSMUSG00000021773.12_21881634_21895947_1	chr14	-	1657	10	NIC	ENSMUSG00000021773.12	novel	2314	7	NA	NA	1931	14289	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	12235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGGAGACACCGTTGCG	NA	False	NA	NA	False	NA	NA	NA	21895947	21881633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUSG00000021773.12_21897126_21898975_1	chr14	-	1041	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	70	1203	-13	121	multi-exon	FALSE	canonical	3	244	junction_3	15.9661099415815	2011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTGAGTAGAGTTCCAA	NA	False	NA	-7	True	AATAAA	-15	NA	21898975	21897125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
ENSMUSG00000021773.12_21897247_21898975_1	chr14	-	920	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	70	1324	-13	0	multi-exon	FALSE	canonical	3	244	junction_3	15.9661099415815	1955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCATCCTCTTCC	NA	False	NA	-10	True	AATAAA	-17	NA	21898975	21897246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
ENSMUSG00000021786.14_6158231_6220438_1	chr14	+	2496	12	NIC	ENSMUSG00000021786.14	novel	3759	3	NA	NA	-61724	-7055	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGCAGGCGCTGAGGAG	NA	False	NA	NA	False	NA	NA	NA	6158230	6220438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
ENSMUSG00000021786.14_6226432_6229217_1	chr14	+	1575	3	FSM	ENSMUSG00000021786.14	ENSMUST00000112625.9	3434	3	0	1859	0	0	multi-exon	FALSE	canonical	3	8	junction_1	6.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTACTTGTTATTTTATAG	NA	False	NA	NA	False	NA	NA	NA	6226431	6229217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_6226474_6226964_6227973_6228692
ENSMUSG00000021807.7_19801352_19861527_1	chr14	-	4529	21	NIC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	11596	60067	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1062	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGCCAGACTCCAACTTG	NA	False	NA	NA	False	NA	NA	NA	19861527	19801351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ENSMUSG00000021807.7_19801352_19861855_1	chr14	-	4857	21	NIC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	11268	60067	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGCCAGACTCCAACTTG	NA	False	NA	NA	False	NA	NA	NA	19861855	19801351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ENSMUSG00000021807.7_19861985_19873892_1	chr14	-	464	3	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	-566	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1548.5	134	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1688	False	NA	-24	True	AATAAA	-16	NA	19873892	19861984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_19862205_19872670_19872759_19873736
ENSMUSG00000021807.7_19861985_19873892_10	chr14	-	952	7	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	-566	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1014.18134746975	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1688	False	NA	-24	True	AATAAA	-16	NA	19873892	19861984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_19862306_19864599_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
ENSMUSG00000021807.7_19861985_19873892_11	chr14	-	990	8	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	-566	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_1	904.637801012321	3690	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1688	False	NA	-24	True	AATAAA	-16	NA	19873892	19861984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_19862300_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
ENSMUSG00000021807.7_19861985_19873892_12	chr14	-	340	3	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	-566	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1548.5	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1688	False	NA	-24	True	AATAAA	-16	NA	19873892	19861984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_19862048_19872637_19872759_19873736
ENSMUSG00000021807.7_19861985_19873892_13	chr14	-	1005	8	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	-566	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_4	945.86932263934	4030	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1688	False	NA	-24	True	AATAAA	-16	NA	19873892	19861984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867119_19867216_19869974_19870075_19872633_19872759_19873736
ENSMUSG00000021807.7_19861985_19873892_2	chr14	-	972	7	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	-566	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1014.18134746975	465	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1688	False	NA	-24	True	AATAAA	-16	NA	19873892	19861984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_19862331_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
ENSMUSG00000021807.7_19861985_19873892_3	chr14	-	991	8	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	-566	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	902.815347133847	3952	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1688	False	NA	-24	True	AATAAA	-16	NA	19873892	19861984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872750_19873732
ENSMUSG00000021807.7_19861985_19873892_4	chr14	-	992	8	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	-566	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	966.653389540534	14249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1688	False	NA	-24	True	AATAAA	-16	NA	19873892	19861984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867208_19869970_19870075_19872633_19872759_19873736
ENSMUSG00000021807.7_19861985_19873892_5	chr14	-	975	7	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	-566	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1014.18134746975	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1688	False	NA	-24	True	AATAAA	-16	NA	19873892	19861984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_19862306_19864576_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
ENSMUSG00000021807.7_19861985_19873892_6	chr14	-	983	8	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	-566	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	944.364401303321	2015	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1688	False	NA	-24	True	AATAAA	-16	NA	19873892	19861984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872646_19872759_19873736
ENSMUSG00000021807.7_19861985_19873892_7	chr14	-	986	8	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	-566	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	966.653389540534	9594	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1688	False	NA	-24	True	AATAAA	-16	NA	19873892	19861984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867202_19869970_19870075_19872633_19872759_19873736
ENSMUSG00000021807.7_19861985_19873892_8	chr14	-	988	8	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	-566	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	966.653389540534	10441	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1688	False	NA	-24	True	AATAAA	-16	NA	19873892	19861984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867208_19869974_19870075_19872633_19872759_19873736
ENSMUSG00000021807.7_19861985_19873892_9	chr14	-	980	7	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	-566	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1014.18134746975	657	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1688	False	NA	-24	True	AATAAA	-16	NA	19873892	19861984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_19862331_19864596_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
ENSMUSG00000021809.11_20344791_20366830_1	chr14	+	1677	9	FSM	ENSMUSG00000021809.11	ENSMUST00000022343.6	2494	9	1	816	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.70809924354783	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTGTGAAGGTATATTTT	NA	False	NA	NA	False	NA	NA	NA	20344790	20366830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_20344861_20350654_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20360689_20360802_20361538_20361694_20366091
ENSMUSG00000021811.8_20434928_20438944_1	chr14	-	1375	5	FSM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	34	222	0	-222	multi-exon	FALSE	canonical	3	896	junction_2	62.1711347813437	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTGGTGGATTATTTAAA	NA	False	NA	-16	True	AATAAA	-15	NA	20438944	20434927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671
ENSMUSG00000021811.8_20434928_20438944_2	chr14	-	1369	5	NNC	ENSMUSG00000021811.8	novel	1631	5	NA	NA	0	-222	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	426.925344761821	2107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTGGTGGATTATTTAAA	NA	False	NA	-16	True	AATAAA	-15	NA	20438944	20434927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_20435547_20435867_20435949_20438024_20438280_20438367_20438509_20438671
ENSMUSG00000021811.8_20435061_20438944_1	chr14	-	1242	5	FSM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	34	355	0	237	multi-exon	FALSE	canonical	3	896	junction_2	62.1711347813437	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTACACGGATCTTCTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	20438944	20435060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671
ENSMUSG00000021814.18_20505345_20530019_1	chr14	-	2652	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	182	17	-10	0	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	2133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTTTTGACCTAGAGTA	8160	False	NA	-1	True	AATAAA	-24	NA	20530019	20505344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ENSMUSG00000021814.18_20506236_20530019_1	chr14	-	1759	13	NNC	ENSMUSG00000021814.18	novel	2851	13	NA	NA	-10	361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	270.403659163276	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTAATGTTAAAAGA	8160	False	NA	-18	True	AATAAA	-19	NA	20530019	20506235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519552_20521431_20521641_20523342_20523398_20529962
ENSMUSG00000021814.18_20506236_20530019_2	chr14	-	1761	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	182	908	-10	361	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTAATGTTAAAAGA	8160	False	NA	-18	True	AATAAA	-19	NA	20530019	20506235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ENSMUSG00000021814.18_20506236_20530189_1	chr14	-	1931	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	12	908	0	361	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	1925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTAATGTTAAAAGA	7990	False	NA	-18	True	AATAAA	-19	NA	20530189	20506235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ENSMUSG00000021824.14_21084875_21102270_1	chr14	-	2671	7	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-7	1207	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	106.531163932855	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTAAAGTTTGATTG	NA	False	NA	-8	True	AATAAA	-17	NA	21102270	21084874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21102207
ENSMUSG00000021824.14_21085818_21102270_1	chr14	-	1728	7	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-7	264	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	106.531163932855	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCATTCTCATGTTT	NA	False	NA	4	True	ATTAAA	-27	NA	21102270	21085817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21102207
ENSMUSG00000021831.10_45523323_45556029_1	chr14	-	1631	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	0	1871	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	176.639737711466	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCATGTTTAATATT	NA	False	NA	-3	True	AGTAAA	-16	NA	45556029	45523322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ENSMUSG00000021832.9_45567285_45586284_1	chr14	+	1309	14	NNC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	0	-878	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	477.345086243639	4795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATGTAATTCAGTAATT	NA	False	NA	26	True	AATAAA	-19	NA	45567284	45586284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574941_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ENSMUSG00000021832.9_45567285_45586284_2	chr14	+	1316	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	40	878	0	-878	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	4955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATGTAATTCAGTAATT	NA	False	NA	26	True	AATAAA	-19	NA	45567284	45586284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ENSMUSG00000021832.9_45567285_45586284_3	chr14	+	1472	15	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	0	-878	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	607.179074550028	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATGTAATTCAGTAATT	NA	False	NA	26	True	AATAAA	-19	NA	45567284	45586284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_45567390_45567822_45567979_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ENSMUSG00000021832.9_45567285_45586531_1	chr14	+	1556	14	NNC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	0	-631	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	477.345086243639	6970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTCTTGTCTTTTCTAA	NA	False	NA	31	True	AATAAA	-23	NA	45567284	45586531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574941_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ENSMUSG00000021840.18_47535723_47557074_1	chr14	+	1067	4	FSM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	-3	3478	0	-3478	multi-exon	FALSE	canonical	3	218	junction_2	12.2836838484589	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGTGTGCTTAATGTGA	9627	False	NA	16	True	GATAAA	-16	NA	47535722	47557074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868
ENSMUSG00000021840.18_47535723_47557322_1	chr14	+	1315	4	FSM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	-3	3230	0	-3230	multi-exon	FALSE	canonical	3	218	junction_2	12.2836838484589	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCTTACTATATTTATC	9627	False	NA	NA	False	NA	NA	NA	47535722	47557322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868
ENSMUSG00000021843.18_47962183_47974016_1	chr14	+	833	6	ISM	ENSMUSG00000021843.18	ENSMUST00000189101.7	3761	37	60939	-266	-42	-2	3prime_fragment	FALSE	canonical	3	405	junction_2	210.819353950248	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47962182	47974016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_+_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ENSMUSG00000021843.18_47962335_47974016_1	chr14	+	889	6	ISM	ENSMUSG00000021843.18	ENSMUST00000186761.2	3902	39	61091	-266	110	-2	3prime_fragment	FALSE	canonical	3	329	junction_1	268.525157108231	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47962334	47974016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_+_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ENSMUSG00000021848.17_48895136_48900210_1	chr14	-	2134	3	ISM	ENSMUSG00000021848.17	ENSMUST00000119070.8	1708	5	4760	-492	119	0	3prime_fragment	FALSE	canonical	3	9	junction_2	17.5	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGGGTCTAGTTTAAT	NA	False	NA	-3	True	ATTAAA	-14	NA	48900210	48895135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_48896784_48898755_48898932_48899900
ENSMUSG00000021866.16_25842607_25886556_1	chr14	+	1695	15	FSM	ENSMUSG00000021866.16	ENSMUST00000022416.15	2394	15	27	672	0	-672	multi-exon	FALSE	canonical	3	387	junction_6	25.4603533329122	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCGGTTTCCCTATCTA	2	True	NA	NA	False	NA	NA	NA	25842606	25886556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_25842720_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ENSMUSG00000021876.16_51328607_51343440_1	chr14	+	1281	2	FSM	ENSMUSG00000021876.16	ENSMUST00000022428.13	1518	2	73	164	73	-164	multi-exon	FALSE	canonical	2	4	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACATATTGCCAAAATGAG	NA	False	NA	NA	False	NA	NA	NA	51328606	51343440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_51328711_51342263
ENSMUSG00000021876.16_51328607_51343608_1	chr14	+	1449	2	FSM	ENSMUSG00000021876.16	ENSMUST00000022428.13	1518	2	73	-4	73	0	multi-exon	FALSE	canonical	2	4	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGGATTTGTGTTCTCC	NA	False	NA	NA	False	AATAAA	-23	NA	51328606	51343608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_51328711_51342263
ENSMUSG00000021877.13_26359229_26377253_2	chr14	+	1005	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	0	1160	0	-703	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGCGTTTAAAACTTGT	1686	False	NA	16	True	ATTAAA	-29	NA	26359228	26377253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ENSMUSG00000021877.13_26359229_26377996_1	chr14	+	1622	5	NNC	ENSMUSG00000021877.13	novel	2165	6	NA	NA	0	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	783.346826124929	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGATTGTGTGTTCTTTTG	1686	False	NA	5	True	AATAAA	-15	NA	26359228	26377996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_26359642_26367813_26367895_26368068_26368179_26375045_26375118_26377050
ENSMUSG00000021877.13_26359229_26377996_4	chr14	+	1689	7	NNC	ENSMUSG00000021877.13	novel	2165	6	NA	NA	0	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	669.287535783803	2377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGATTGTGTGTTCTTTTG	1686	False	NA	5	True	AATAAA	-15	NA	26359228	26377996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_26359411_26359469_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ENSMUSG00000021877.13_26359229_26377996_5	chr14	+	1679	6	NNC	ENSMUSG00000021877.13	novel	2165	6	NA	NA	0	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	731.154429652177	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGATTGTGTGTTCTTTTG	1686	False	NA	5	True	AATAAA	-15	NA	26359228	26377996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374292_26375019_26375118_26377050
ENSMUSG00000021877.13_26359381_26377996_1	chr14	+	1482	6	NNC	ENSMUSG00000021877.13	novel	2165	6	NA	NA	0	27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	709.032298277025	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGATTGTGTGTTCTTTTG	1838	False	NA	5	True	AATAAA	-15	NA	26359380	26377996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375060_26377106
ENSMUSG00000021884.19_31329810_31362921_1	chr14	-	1990	17	FSM	ENSMUSG00000021884.19	ENSMUST00000022437.16	2644	17	0	654	0	116	multi-exon	FALSE	canonical	3	36	junction_9	6.10199762372946	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTGTTTT	6945	False	NA	NA	False	AGTAAA	-32	NA	31362921	31329809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31356155_31356237_31357700_31357742_31362450_31362556_31362745
ENSMUSG00000021884.19_31329810_31363217_1	chr14	-	2286	17	FSM	ENSMUSG00000021884.19	ENSMUST00000022437.16	2644	17	-296	654	-3	116	multi-exon	FALSE	canonical	3	36	junction_9	6.10199762372946	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTGTTTT	6649	False	NA	NA	False	AGTAAA	-32	NA	31363217	31329809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31356155_31356237_31357700_31357742_31362450_31362556_31362745
ENSMUSG00000021890.7_31200749_31216978_1	chr14	+	1955	6	NIC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	-15607	-5454	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTTCCGTTGGGGAGAC	NA	False	NA	NA	False	NA	NA	NA	31200748	31216978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ENSMUSG00000021890.7_31200954_31216978_1	chr14	+	1608	5	NIC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	-15402	-5454	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTTCCGTTGGGGAGAC	NA	False	NA	NA	False	NA	NA	NA	31200953	31216978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_31201768_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ENSMUSG00000021890.7_31200954_31216978_3	chr14	+	1750	6	NIC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	-15402	-5454	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTTCCGTTGGGGAGAC	NA	False	NA	NA	False	NA	NA	NA	31200953	31216978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ENSMUSG00000021890.7_31201542_31216978_1	chr14	+	1162	6	NIC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	-14814	-5454	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTTCCGTTGGGGAGAC	NA	False	NA	NA	False	NA	NA	NA	31201541	31216978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ENSMUSG00000021890.7_31203306_31216978_1	chr14	+	1041	6	NIC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	-13050	-5454	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTTCCGTTGGGGAGAC	NA	False	NA	NA	False	NA	NA	NA	31203305	31216978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_31203411_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ENSMUSG00000021890.7_31217153_31231639_1	chr14	+	3945	6	FSM	ENSMUSG00000021890.7	ENSMUST00000022446.7	4918	6	797	176	0	-176	multi-exon	FALSE	canonical	3	223	junction_4	16.2357629940819	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAATGTCTTGTTTTAT	6399	False	NA	NA	False	AATAAA	-18	NA	31217152	31231639	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226243_31226478_31228527
ENSMUSG00000021900.11_31363014_31390145_1	chr14	+	1933	4	FSM	ENSMUSG00000021900.11	ENSMUST00000090147.7	2324	4	0	391	0	-391	multi-exon	FALSE	canonical	1	3	junction_2	7.40870359029762	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGCAGAATACTGGCTGGG	NA	False	NA	6	True	AATAAA	-22	NA	31363013	31390145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_31363093_31384026_31384283_31387838_31387989_31388697
ENSMUSG00000021905.15_31804833_31807566_1	chr14	-	646	3	FSM	ENSMUSG00000021905.15	ENSMUST00000067955.12	2953	3	0	2307	0	0	multi-exon	FALSE	canonical	3	570	junction_1	6	3429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCCTGAGTGTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	31807566	31804832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_31805204_31806863_31806939_31807366
ENSMUSG00000021905.15_31804833_31807686_1	chr14	-	766	3	FSM	ENSMUSG00000021905.15	ENSMUST00000067955.12	2953	3	-120	2307	0	0	multi-exon	FALSE	canonical	3	570	junction_1	6	3475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCCTGAGTGTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	31807686	31804832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_31805204_31806863_31806939_31807366
ENSMUSG00000021906.15_31807768_31824612_1	chr14	+	1431	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	398	547	0	0	multi-exon	FALSE	canonical	3	171	junction_6	23.2422908000191	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGGCCACATTTCAGAT	NA	False	NA	NA	False	NA	NA	NA	31807767	31824612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
ENSMUSG00000021906.15_31807768_31825160_1	chr14	+	1979	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	398	-1	0	1	multi-exon	FALSE	canonical	3	171	junction_6	23.2422908000191	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	21	True	AATACA	-20	NA	31807767	31825160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
ENSMUSG00000021906.15_31807834_31825159_1	chr14	+	1912	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	464	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	23.2422908000191	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATGTTTAATGTTTCAG	NA	False	NA	20	True	AATACA	-19	NA	31807833	31825159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
ENSMUSG00000021910.16_30905270_30928658_1	chr14	-	2655	14	FSM	ENSMUSG00000021910.16	ENSMUST00000172142.8	2780	14	125	0	0	0	multi-exon	TRUE	canonical	3	57	junction_1	267.283529621824	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACATCTTTTTCCTTT	9421	False	NA	3	True	AATAAA	-20	NA	30928658	30905269	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_30906355_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ENSMUSG00000021910.16_30910297_30928658_1	chr14	-	1262	8	ISM	ENSMUSG00000021910.16	ENSMUST00000164989.8	2276	11	-1	2614	0	0	5prime_fragment	FALSE	canonical	3	935	junction_3	91.9329835771023	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAATGAATCTTAAAAAA	9421	False	NA	NA	False	NA	NA	NA	30928658	30910296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ENSMUSG00000021910.16_30917376_30928658_1	chr14	-	609	4	NNC	ENSMUSG00000021910.16	novel	1763	3	NA	NA	0	5525	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	532.482863574031	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAACTCTCTGTGTTTTC	9421	False	NA	NA	False	ATTAAA	-16	NA	30928658	30917375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_30917583_30925183_30925367_30926398_30926483_30928523
ENSMUSG00000021913.9_32068682_32070108_1	chr14	+	751	3	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	21333	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_2	330	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCCTCCTTTCCTA	NA	False	NA	12	True	AATAAA	-18	NA	32068681	32070108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_32068811_32069462_32069787_32069810
ENSMUSG00000021916.17_30723361_30733948_1	chr14	+	1591	11	NIC	ENSMUSG00000021916.17	novel	1498	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	48.6193377165917	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGCTTCCCCATTTT	3530	False	NA	9	True	AATAAA	-20	NA	30723360	30733948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_30723386_30726651_30726748_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ENSMUSG00000021916.17_30723847_30733948_1	chr14	+	1578	10	FSM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	440	0	214	0	multi-exon	FALSE	canonical	3	31	junction_1	32.2321823686655	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGCTTCCCCATTTT	4016	False	NA	9	True	AATAAA	-20	NA	30723846	30733948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ENSMUSG00000021928.10_61578440_61597769_1	chr14	-	724	4	FSM	ENSMUSG00000021928.10	ENSMUST00000022494.10	10092	4	119	9249	0	-1226	multi-exon	FALSE	canonical	3	296	junction_1	24.8506650928211	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGGTGTGACTTAGTAG	NA	False	NA	-5	True	ATTAAA	-18	NA	61597769	61578439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_61578854_61579536_61579676_61584820_61584891_61597668
ENSMUSG00000021928.10_61578440_61597888_1	chr14	-	843	4	FSM	ENSMUSG00000021928.10	ENSMUST00000022494.10	10092	4	0	9249	0	-1226	multi-exon	FALSE	canonical	3	296	junction_1	24.8506650928211	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGGTGTGACTTAGTAG	NA	False	NA	-5	True	ATTAAA	-18	NA	61597888	61578439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_61578854_61579536_61579676_61584820_61584891_61597668
ENSMUSG00000021929.10_61603898_61677323_1	chr14	-	2831	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	0	1238	0	-1238	multi-exon	FALSE	canonical	2	379	junction_16	73.5790391347971	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTGTAGAGGAATGGT	6546	False	NA	-2	True	ATTAAA	-13	NA	61677323	61603897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ENSMUSG00000021929.10_61604500_61677323_1	chr14	-	2229	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	0	1840	0	-1840	multi-exon	FALSE	canonical	2	379	junction_16	73.5790391347971	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCACCTACCATTAATTGA	6546	False	NA	0	True	ATTAAA	-24	NA	61677323	61604499	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ENSMUSG00000021930.15_61771328_61794207_1	chr14	-	1988	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	128	1886	0	426	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATTTTCATGGTGTC	NA	False	NA	1	True	AATAAA	-22	NA	61794207	61771327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
ENSMUSG00000021930.15_61771754_61794207_1	chr14	-	1562	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	128	2312	0	0	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTCAGTATTATATTTA	NA	False	NA	NA	False	AATAAA	-13	NA	61794207	61771753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
ENSMUSG00000021930.15_61772296_61794207_2	chr14	-	1020	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	128	2854	0	-542	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAATTGAGTGATTATT	NA	False	NA	-6	True	TATAAA	-43	NA	61794207	61772295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
ENSMUSG00000021932.14_62530038_62609960_1	chr14	+	970	11	NIC	ENSMUSG00000021932.14	novel	362	5	NA	NA	0	-481	combination_of_known_junctions	TRUE	canonical	2	10	junction_1	256.284704966957	570	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62530037	62609960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_62530104_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ENSMUSG00000021932.14_62569517_62608332_1	chr14	+	1192	10	ISM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	0	2109	0	-2109	5prime_fragment	FALSE	canonical	3	538	junction_2	119.060623628324	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCGTTCTCCTGCAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	62569516	62608332	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920
ENSMUSG00000021932.14_62569517_62609960_1	chr14	+	779	9	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	0	-481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	277.707326829884	232	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569516	62609960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_62569626_62584016_62584049_62590977_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ENSMUSG00000021932.14_62569517_62609960_2	chr14	+	932	10	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	0	-481	combination_of_known_splicesites	FALSE	canonical	1	4	junction_9	269.35648048682	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569516	62609960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62609808
ENSMUSG00000021932.14_62569517_62609960_4	chr14	+	899	10	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	0	-481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	302.781712512659	1601	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569516	62609960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_62569626_62584016_62584092_62587848_62587926_62590977_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ENSMUSG00000021932.14_62569517_62609960_5	chr14	+	830	9	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	0	-481	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	277.491891773435	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569516	62609960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_62569626_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ENSMUSG00000021932.14_62569517_62609960_6	chr14	+	1010	10	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	0	-481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	260.530986759211	583	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569516	62609960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62607880_62608002_62609808
ENSMUSG00000021932.14_62569517_62609960_7	chr14	+	1007	11	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	0	-481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	256.276588864453	4571	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569516	62609960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590977_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ENSMUSG00000021932.14_62569517_62609960_8	chr14	+	1099	11	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	0	-481	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_6	250.336753194572	3275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569516	62609960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62598063_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ENSMUSG00000021932.14_62569517_62610445_1	chr14	+	1492	11	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	256.276588864453	5233	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATAGTTTTGTTGCTTTTT	NA	False	NA	9	True	AATAAA	-21	NA	62569516	62610445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590977_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ENSMUSG00000021932.14_62569517_62616007_1	chr14	+	1455	10	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	0	5566	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	267.103022617413	180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTGTGCAATATGTGTAT	NA	False	NA	NA	False	TATAAA	-20	NA	62569516	62616007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62615332
ENSMUSG00000021936.15_33102749_33169112_1	chr14	-	2854	12	FSM	ENSMUSG00000021936.15	ENSMUST00000022504.12	2587	12	-10	-257	2	257	multi-exon	FALSE	canonical	0	0	junction_1	3.14655787270487	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGAAATGATGTCTATA	NA	False	NA	-11	True	AGTAAA	-21	NA	33169112	33102748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_33104277_33105830_33105909_33108518_33108583_33109128_33109254_33110756_33110940_33112198_33112271_33114898_33115065_33124580_33124720_33124821_33124881_33130004_33130135_33132812_33132982_33168971
ENSMUSG00000021939.9_63359911_63380584_1	chr14	+	1950	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	0	1272	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2336.48131034259	11187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCAGGGTGCACGGTT	NA	False	NA	26	True	AATAAA	-21	NA	63359910	63380584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376571_63379193_63379312_63379680
ENSMUSG00000021939.9_63359963_63380096_1	chr14	+	1414	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	0	784	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	2369.69959548452	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGCATCCGAGGACCCA	NA	False	NA	NA	False	NA	NA	NA	63359962	63380096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_63360019_63370769_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ENSMUSG00000021939.9_63359963_63380096_2	chr14	+	1509	11	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	0	784	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2965.53763928229	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGCATCCGAGGACCCA	NA	False	NA	NA	False	NA	NA	NA	63359962	63380096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_63360015_63367085_63367180_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ENSMUSG00000021939.9_63359963_63380096_3	chr14	+	1415	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	52	3276	0	784	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGCATCCGAGGACCCA	NA	False	NA	NA	False	NA	NA	NA	63359962	63380096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ENSMUSG00000021939.9_63359963_63380584_1	chr14	+	1902	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	0	1272	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2369.69959548452	12140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCAGGGTGCACGGTT	NA	False	NA	26	True	AATAAA	-21	NA	63359962	63380584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_63360019_63370769_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ENSMUSG00000021939.9_63359963_63380584_2	chr14	+	1997	11	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	0	1272	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2965.53763928229	4245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCAGGGTGCACGGTT	NA	False	NA	26	True	AATAAA	-21	NA	63359962	63380584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_63360015_63367085_63367180_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ENSMUSG00000021939.9_63359963_63380584_3	chr14	+	1248	11	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	0	1272	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2249.16024551387	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCAGGGTGCACGGTT	NA	False	NA	26	True	AATAAA	-21	NA	63359962	63380584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680_63379760_63380414
ENSMUSG00000021939.9_63359963_63380584_4	chr14	+	1897	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	0	1272	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2369.69959548452	11759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCAGGGTGCACGGTT	NA	False	NA	26	True	AATAAA	-21	NA	63359962	63380584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_63360019_63370774_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ENSMUSG00000021945.10_57124110_57197809_1	chr14	+	4707	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	57.3773904125619	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTGTTTGTTTGT	NA	False	NA	21	True	AATAAA	-17	NA	57124109	57197809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163419_57165643_57165799_57169545_57169723_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ENSMUSG00000021951.8_57787054_57809026_1	chr14	-	834	5	NNC	ENSMUSG00000021951.8	novel	880	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	107.885066158389	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTCATGAGGTTGAGA	NA	False	NA	-8	True	AATAAA	-20	NA	57809026	57787053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378_57803535_57808995
ENSMUSG00000021951.8_57787054_57809026_2	chr14	-	674	4	NIC	ENSMUSG00000021951.8	novel	880	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	119.268138615847	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTCATGAGGTTGAGA	NA	False	NA	-8	True	AATAAA	-20	NA	57809026	57787053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_57787337_57787818_57788100_57795490_57795574_57808999
ENSMUSG00000021953.15_63729796_63746217_1	chr14	-	1552	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1043.90932915651	8778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTTTTACTTAGGATT	NA	False	NA	-16	True	ATTAAA	-18	NA	63746217	63729795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_63730291_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ENSMUSG00000021953.15_63729907_63746217_1	chr14	-	1441	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-12	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1043.90932915651	1509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63746217	63729906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_63730291_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ENSMUSG00000021953.15_63729907_63746217_2	chr14	-	1446	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	324	111	-12	-111	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	12481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63746217	63729906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ENSMUSG00000021953.15_63729907_63746325_1	chr14	-	1554	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	216	111	-120	-111	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	13255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63746325	63729906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ENSMUSG00000021957.8_30271138_30295581_1	chr14	+	2071	14	NNC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	577.984357192964	5029	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30271137	30295581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_30271338_30280677_30280796_30281708_30281817_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUSG00000021957.8_30271138_30295581_10	chr14	+	1152	8	NNC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	699.669717999653	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30271137	30295581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290192_30295341
ENSMUSG00000021957.8_30271138_30295581_2	chr14	+	2026	15	NNC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	557.507266356965	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30271137	30295581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287554_30287604_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUSG00000021957.8_30271138_30295581_3	chr14	+	2069	14	NNC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	578.538742802137	3580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30271137	30295581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287452_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUSG00000021957.8_30271138_30295581_4	chr14	+	1972	14	NNC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	573.390270554763	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30271137	30295581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293142_30294208_30294288_30295293
ENSMUSG00000021957.8_30271138_30295581_5	chr14	+	2055	14	NNC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	578.023770523273	1924	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30271137	30295581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_30271316_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUSG00000021957.8_30271138_30295581_6	chr14	+	2067	14	NNC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	576.204270156639	3176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30271137	30295581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_30271338_30280677_30280796_30281718_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUSG00000021957.8_30271138_30295581_7	chr14	+	2072	14	NNC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	573.390270554763	4498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30271137	30295581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294169_30294288_30295293
ENSMUSG00000021957.8_30271138_30295581_8	chr14	+	2065	14	NNC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	573.390270554763	2112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30271137	30295581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293191_30294164_30294288_30295293
ENSMUSG00000021957.8_30271138_30295581_9	chr14	+	2070	14	NNC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	577.984357192964	1994	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30271137	30295581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_30271338_30280677_30280796_30281708_30281823_30282550_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUSG00000021958.6_64097813_64157304_1	chr14	+	1406	8	NNC	ENSMUSG00000021958.6	novel	1295	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	31.4324672910034	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGAGCCTTTCACATGA	4087	False	NA	NA	False	AATAAA	-39	NA	64097812	64157304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_64097897_64101664_64101775_64103551_64103645_64105967_64106047_64109750_64109844_64115560_64115638_64130171_64130283_64156545
ENSMUSG00000021963.18_58035675_58039606_1	chr14	+	591	4	NNC	ENSMUSG00000021963.18	novel	5125	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1344.98872362064	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTTTGCCATTAAGCCT	NA	False	NA	NA	False	AATAAA	-23	NA	58035674	58039606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_58035812_58035944_58036055_58038950_58039074_58039385
ENSMUSG00000021963.18_58035675_58039606_2	chr14	+	598	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	38	4489	0	2	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	8904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTTTGCCATTAAGCCT	NA	False	NA	NA	False	AATAAA	-23	NA	58035674	58039606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
ENSMUSG00000021963.18_58035675_58039784_1	chr14	+	776	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	38	4311	0	0	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	16133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCCAGGTGTAAAAGTT	NA	False	NA	-4	True	TATAAA	-28	NA	58035674	58039784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
ENSMUSG00000021963.18_58035675_58040929_1	chr14	+	1921	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	38	3166	0	1137	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	45957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGAGTGACTGCCTATC	NA	False	NA	NA	False	NA	NA	NA	58035674	58040929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
ENSMUSG00000021965.4_58044018_58063625_1	chr14	-	2177	9	NNC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	72.2253418129676	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTATGTTGCCAACTC	NA	False	NA	-7	True	AATAAA	-19	NA	58063625	58044017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_58044989_58045431_58045536_58047399_58047513_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
ENSMUSG00000021967.5_58063691_58064407_1	chr14	+	531	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	0	2346	0	2	multi-exon	FALSE	canonical	3	956	junction_1	0	3150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGTCTCATACGGAATA	NA	False	NA	27	True	ATTAAA	-19	NA	58063690	58064407	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_58063780_58063965
ENSMUSG00000021967.5_58063691_58064407_2	chr14	+	522	2	NNC	ENSMUSG00000021967.5	novel	2877	2	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	155	junction_1	0	3113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGTCTCATACGGAATA	NA	False	NA	27	True	ATTAAA	-19	NA	58063690	58064407	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_58063771_58063965
ENSMUSG00000021969.9_58073567_58127733_1	chr14	-	1779	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	0	3407	0	144	multi-exon	FALSE	canonical	3	200	junction_2	22.1702691308277	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACACTCAAAGAAGGATTC	NA	False	NA	NA	False	AATAAA	-26	NA	58127733	58073566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ENSMUSG00000021969.9_58073567_58127733_2	chr14	-	1702	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	0	144	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	61.0282416672129	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACACTCAAAGAAGGATTC	NA	False	NA	NA	False	AATAAA	-26	NA	58127733	58073566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_58074104_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ENSMUSG00000021969.9_58073711_58127733_1	chr14	-	1635	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	0	3551	0	0	multi-exon	FALSE	canonical	3	200	junction_2	22.1702691308277	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATGATGCCCAAATCA	NA	False	NA	NA	False	AAAAAG	-38	NA	58127733	58073710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ENSMUSG00000021969.9_58073856_58127733_1	chr14	-	1490	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	0	3696	0	-145	multi-exon	FALSE	canonical	3	200	junction_2	22.1702691308277	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTCACGTGTTAACATGCC	NA	False	NA	NA	False	NA	NA	NA	58127733	58073855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ENSMUSG00000021993.11_61028336_61141060_1	chr14	+	1836	16	ISM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	6314	618	6249	-618	3prime_fragment	FALSE	canonical	3	187	junction_7	25.0372167427257	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTGTCTCACCTGCTTG	NA	False	NA	NA	False	AATAAA	-18	NA	61028335	61141060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_+_61028423_61033620_61033685_61039569_61039753_61040261_61040419_61046416_61046466_61048547_61048609_61052401_61052455_61064747_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
ENSMUSG00000021993.11_61076061_61141060_1	chr14	+	827	6	NNC	ENSMUSG00000021993.11	novel	3015	19	NA	NA	53974	-618	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	108.296999035061	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTGTCTCACCTGCTTG	NA	False	NA	NA	False	AATAAA	-18	NA	61076060	61141060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_61076253_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
ENSMUSG00000021996.17_74969759_74987288_1	chr14	+	1049	9	FSM	ENSMUSG00000021996.17	ENSMUST00000022573.17	1988	9	22	917	0	0	multi-exon	FALSE	canonical	3	1089	junction_1	102.16133074701	5862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAATTGTTATTTT	NA	False	NA	13	True	AATAAA	-14	NA	74969758	74987288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
ENSMUSG00000022009.2_76348331_76372525_1	chr14	+	1675	10	NNC	ENSMUSG00000022009.2	novel	3974	10	NA	NA	0	-2294	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	155.526187703963	1135	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATAGTGTGTCTGTGTCA	NA	False	NA	23	True	AATAAA	-19	NA	76348330	76372525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_76348767_76349363_76349438_76351619_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411_76370639_76372225
ENSMUSG00000022010.20_76741970_76745202_1	chr14	+	780	2	NNC	ENSMUSG00000022010.20	novel	801	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTGTTTCTATATGA	6591	False	NA	28	True	AATAAA	-18	NA	76741969	76745202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_76742147_76744599
ENSMUSG00000022010.20_76741970_76745202_2	chr14	+	1238	4	NNC	ENSMUSG00000022010.20	novel	1762	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1082.36623499935	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTGTTTCTATATGA	6591	False	NA	28	True	AATAAA	-18	NA	76741969	76745202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_76742282_76742688_76742738_76743856_76744699_76745167
ENSMUSG00000022010.20_76741970_76745202_3	chr14	+	1513	4	NNC	ENSMUSG00000022010.20	novel	1762	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1082.36623499935	2616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTGTTTCTATATGA	6591	False	NA	28	True	AATAAA	-18	NA	76741969	76745202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_76742282_76742688_76742738_76743856_76744412_76744605
ENSMUSG00000022010.20_76741970_76745202_4	chr14	+	1465	4	NNC	ENSMUSG00000022010.20	novel	1762	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1082.36623499935	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTGTTTCTATATGA	6591	False	NA	28	True	AATAAA	-18	NA	76741969	76745202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_76742282_76742688_76742738_76743856_76744353_76744594
ENSMUSG00000022010.20_76741970_76745202_5	chr14	+	1412	4	NNC	ENSMUSG00000022010.20	novel	1762	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1082.36623499935	1956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTGTTTCTATATGA	6591	False	NA	28	True	AATAAA	-18	NA	76741969	76745202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_76742282_76742688_76742738_76743856_76744307_76744601
ENSMUSG00000022010.20_76742145_76745202_1	chr14	+	1532	3	FSM	ENSMUSG00000022010.20	ENSMUST00000022587.10	1762	3	227	3	175	0	multi-exon	FALSE	canonical	3	2255	junction_1	40	4801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTGTTTCTATATGA	6766	False	NA	28	True	AATAAA	-18	NA	76742144	76745202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_76742282_76742688_76742738_76743856
ENSMUSG00000022013.5_78063655_78112366_1	chr14	-	654	6	NNC	ENSMUSG00000022013.5	novel	6193	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	245.528491218433	3750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGATGCTTTTCCACA	NA	False	NA	-7	True	NA	NA	NA	78112366	78063654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_78063911_78077607_78077679_78081835_78081913_78090337_78090412_78094378_78094426_78112237
ENSMUSG00000022013.5_78063655_78112366_2	chr14	-	642	6	NNC	ENSMUSG00000022013.5	novel	6193	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_4	249.321800089764	3696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGATGCTTTTCCACA	NA	False	NA	-7	True	NA	NA	NA	78112366	78063654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_78063911_78077607_78077679_78081835_78081913_78090337_78090395_78094378_78094431_78112237
ENSMUSG00000022013.5_78063655_78112565_1	chr14	-	858	6	FSM	ENSMUSG00000022013.5	ENSMUST00000226459.2	6193	6	-199	5534	0	0	multi-exon	FALSE	canonical	3	520	junction_3	59.8618409339372	3927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGATGCTTTTCCACA	NA	False	NA	-7	True	NA	NA	NA	78112565	78063654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_78063911_78077607_78077679_78081835_78081913_78090337_78090412_78094378_78094431_78112237
ENSMUSG00000022013.5_78063787_78112366_1	chr14	-	527	6	FSM	ENSMUSG00000022013.5	ENSMUST00000226459.2	6193	6	0	5666	0	0	multi-exon	FALSE	canonical	3	520	junction_3	59.8618409339372	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTCCTTCAGAAGAATG	NA	False	NA	-139	True	NA	NA	NA	78112366	78063786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_78063911_78077607_78077679_78081835_78081913_78090337_78090412_78094378_78094431_78112237
ENSMUSG00000022018.8_79526196_79538941_1	chr14	-	774	5	FSM	ENSMUSG00000022018.8	ENSMUST00000022595.8	918	5	144	0	144	0	multi-exon	FALSE	canonical	3	129	junction_2	11.7046999107196	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACTTTGAAAGCTGCC	NA	False	NA	-11	True	AATAAA	-14	NA	79538941	79526195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_79526560_79527683_79527747_79529110_79529219_79538154_79538341_79538888
ENSMUSG00000022022.4_79635426_79661031_1	chr14	+	1589	11	FSM	ENSMUSG00000022022.4	ENSMUST00000022600.4	1799	11	214	-4	0	4	multi-exon	FALSE	canonical	3	73	junction_10	10.5683489722851	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGCCTACAGAGTTTTT	NA	False	NA	5	True	AATAAA	-16	NA	79635425	79661031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_79635477_79637131_79637240_79638861_79639288_79640264_79640357_79644016_79644099_79644285_79644394_79649081_79649255_79650426_79650545_79653317_79653455_79656627_79656727_79660836
ENSMUSG00000022023.7_79697377_79718452_1	chr14	-	3196	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	508	0	-50	0	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTGTGTTTGTTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	79718452	79697376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ENSMUSG00000022023.7_79698390_79718452_2	chr14	-	2183	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	508	1013	-50	0	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCATAAAGTAAATAT	NA	False	NA	NA	False	NA	NA	NA	79718452	79698389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ENSMUSG00000022023.7_79699092_79718452_1	chr14	-	1358	8	NIC	ENSMUSG00000022023.7	novel	1512	11	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	112.21899144448	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGCTATGTATCTGTTA	NA	False	NA	91	True	NA	NA	NA	79718452	79699091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_79699570_79703622_79703790_79704712_79704904_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ENSMUSG00000022023.7_79699092_79718452_2	chr14	-	1481	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	508	1715	-50	0	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGCTATGTATCTGTTA	NA	False	NA	91	True	NA	NA	NA	79718452	79699091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ENSMUSG00000022024.11_79825131_79866417_1	chr14	+	1169	12	NNC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	532.160061051666	4705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825130	79866417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840354_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ENSMUSG00000022024.11_79825249_79866417_1	chr14	+	1049	13	NNC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	507.714233654677	4532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825248	79866417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840292_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ENSMUSG00000022024.11_79825249_79866417_2	chr14	+	1043	11	NNC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	558.085692344823	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825248	79866417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79846358_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ENSMUSG00000022024.11_79825249_79866417_3	chr14	+	1039	12	NNC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	532.318956147891	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825248	79866417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79846379_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ENSMUSG00000022024.11_79825249_79866417_4	chr14	+	1051	12	NNC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	532.160061051666	1237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825248	79866417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840354_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ENSMUSG00000022024.11_79825249_79866417_5	chr14	+	1037	11	NNC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	558.085692344823	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825248	79866417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840372_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ENSMUSG00000022024.11_79825249_79866417_6	chr14	+	1055	12	NNC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	714.682394927869	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825248	79866417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840354_79844685_79844722_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ENSMUSG00000022024.11_79825249_79866508_1	chr14	+	1142	12	NNC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	0	91	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	532.160061051666	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTTAGAAATGATTTT	NA	False	NA	19	True	ATTAAA	-15	NA	79825248	79866508	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840354_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ENSMUSG00000022024.11_79825249_79866508_2	chr14	+	1146	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	118	6128	0	91	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	5766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTTAGAAATGATTTT	NA	False	NA	19	True	ATTAAA	-15	NA	79825248	79866508	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ENSMUSG00000022033.10_66043551_66055271_1	chr14	+	1455	8	FSM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	265	0	-130	0	multi-exon	FALSE	canonical	3	729	junction_5	59.6342594316319	1567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCATTATCTGTTTTT	NA	False	NA	25	True	AATAAA	-41	NA	66043550	66055271	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_66043584_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
ENSMUSG00000022033.10_66043681_66055271_1	chr14	+	1493	8	NIC	ENSMUSG00000022033.10	novel	451	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	250.309767272148	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCATTATCTGTTTTT	NA	False	NA	25	True	AATAAA	-41	NA	66043680	66055271	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_66043752_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
ENSMUSG00000022034.11_66056487_66071368_1	chr14	-	2835	11	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	306.049603822648	1636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6419	False	NA	-11	True	ATTAAA	-14	NA	66071368	66056486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064054_66064612_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ENSMUSG00000022040.9_66321826_66361949_1	chr14	-	2115	19	NNC	ENSMUSG00000022040.9	novel	2035	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_18	48.1696141607452	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTTTCTTGTGTTCTTG	NA	False	NA	-5	True	AATAAA	-16	NA	66361949	66321825	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361703
ENSMUSG00000022051.16_67224601_67246305_1	chr14	-	1301	6	NNC	ENSMUSG00000022051.16	novel	3259	7	NA	NA	0	121	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	287.061944534625	3093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGAGCCGCTCTTTTC	NA	False	NA	-5	True	AATAAA	-16	NA	67246305	67224600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_67225225_67226583_67226734_67226854_67226952_67231321_67231399_67236969_67237154_67246136
ENSMUSG00000022052.10_67253123_67309884_1	chr14	-	2362	11	NNC	ENSMUSG00000022052.10	novel	2192	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	3	285	junction_10	142.73475400196	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAATCTGGTTTTCTTT	NA	False	NA	-5	True	AATAAA	-13	NA	67309884	67253122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538_67309797_67309817
ENSMUSG00000022054.12_68321312_68325339_1	chr14	-	2175	4	NIC	ENSMUSG00000022054.12	novel	3680	4	NA	NA	36956	-1273	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGGCGCGGTCCTGCCA	NA	False	NA	NA	False	NA	NA	NA	68325339	68321311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_68322459_68323422_68323548_68323935_68324256_68324756
ENSMUSG00000022070.8_99283890_99285348_1	chr14	+	839	2	FSM	ENSMUSG00000022070.8	ENSMUST00000226823.2	1071	2	232	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	AATAAA	-44	NA	99283889	99285348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_99284117_99284736
ENSMUSG00000022070.8_99283890_99311332_1	chr14	+	2005	12	FSM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	77	644	0	-643	multi-exon	FALSE	canonical	3	218	junction_1	51.3357124417381	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTTGTTTAACAAGTAA	NA	False	NA	17	True	AATAAA	-21	NA	99283889	99311332	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ENSMUSG00000022070.8_99283890_99311976_1	chr14	+	2680	12	NNC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	93.6248006982398	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTTTCCTTGTTCTGT	NA	False	NA	5	True	AATAAA	-16	NA	99283889	99311976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310216_99311081
ENSMUSG00000022074.7_70004921_70020997_1	chr14	+	2316	8	FSM	ENSMUSG00000022074.7	ENSMUST00000022663.7	3179	8	0	863	0	-863	multi-exon	FALSE	canonical	0	0	junction_5	19.7556501863572	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCCTATGCCCTCCCCC	NA	False	NA	NA	False	NA	NA	NA	70004920	70020997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015169_70015265_70017952_70018023_70019680
ENSMUSG00000022089.10_70337572_70372554_1	chr14	+	916	8	ISM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	18	3101	0	579	5prime_fragment	FALSE	canonical	3	54	junction_3	8.9511143987546	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAACTCTTCGCCCCTTGA	NA	False	NA	NA	False	NA	NA	NA	70337571	70372554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_+_70337646_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184
ENSMUSG00000022089.10_70337587_70375410_1	chr14	+	1489	9	FSM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	33	245	0	-245	multi-exon	FALSE	canonical	3	54	junction_3	8.98523093748847	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGTGTACTTTAACTGA	NA	False	NA	NA	False	AGTAAA	-15	NA	70337586	70375410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_70337646_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184_70372320_70374587
ENSMUSG00000022099.18_70841110_70864319_2	chr14	-	2520	14	NNC	ENSMUSG00000022099.18	novel	2643	16	NA	NA	175	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	54.765773443168	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGTTTCTATCCATGC	NA	False	NA	0	True	ATTAAA	-22	NA	70864319	70841109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_70842295_70842407_70842489_70843120_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
ENSMUSG00000022099.18_70841110_70864498_1	chr14	-	2699	14	NNC	ENSMUSG00000022099.18	novel	2643	16	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	54.765773443168	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGTTTCTATCCATGC	NA	False	NA	0	True	ATTAAA	-22	NA	70864498	70841109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_70842295_70842407_70842489_70843120_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
ENSMUSG00000022101.7_70873643_70879694_2	chr14	-	1675	5	FSM	ENSMUSG00000022101.7	ENSMUST00000022697.7	1689	5	14	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	15.3195136998535	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGTCCGCTGAAGAAAGG	NA	False	NA	0	True	AATAAA	-16	NA	70879694	70873642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_70874464_70875906_70876014_70876241_70876420_70878971_70879009_70879162
ENSMUSG00000022101.7_70873643_70879694_3	chr14	-	1642	5	FSM	ENSMUSG00000022101.7	ENSMUST00000227123.2	1336	5	0	-306	0	0	multi-exon	FALSE	canonical	3	35	junction_3	9.90896059130321	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGTCCGCTGAAGAAAGG	NA	False	NA	0	True	AATAAA	-16	NA	70879694	70873642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_70874464_70875906_70876014_70876241_70876387_70878971_70879009_70879162
ENSMUSG00000022101.7_70873643_70879757_1	chr14	-	1705	5	FSM	ENSMUSG00000022101.7	ENSMUST00000227123.2	1336	5	-63	-306	-49	0	multi-exon	FALSE	canonical	3	35	junction_3	9.90896059130321	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGTCCGCTGAAGAAAGG	NA	False	NA	0	True	AATAAA	-16	NA	70879757	70873642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_70874464_70875906_70876014_70876241_70876387_70878971_70879009_70879162
ENSMUSG00000022106.15_73380449_73392653_1	chr14	+	740	4	FSM	ENSMUSG00000022106.15	ENSMUST00000165646.8	591	4	-101	-48	0	1	multi-exon	FALSE	canonical	3	34	junction_2	3.29983164553722	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCCAACTCACTGTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	73380448	73392653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270
ENSMUSG00000022108.9_73599851_73622729_1	chr14	-	1611	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	0	185	0	-185	multi-exon	FALSE	canonical	3	633	junction_1	88.6128658830082	2341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGAGACTGTGCGTTG	NA	False	NA	-7	True	TATAAA	-14	NA	73622729	73599850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
ENSMUSG00000022108.9_73600325_73622729_1	chr14	-	1137	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	0	659	0	0	multi-exon	FALSE	canonical	3	633	junction_1	88.6128658830082	1886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACCTTTCTTTTTTCTA	NA	False	NA	-19	True	ATTAAA	-25	NA	73622729	73600324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
ENSMUSG00000022109.7_73747465_73755985_1	chr14	+	1301	8	NNC	ENSMUSG00000022109.7	novel	1328	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	122.246655978637	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTTTTTTCAATTTTT	NA	False	NA	15	True	AATAAA	-17	NA	73747464	73755985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333_73755598_73755624
ENSMUSG00000022109.7_73747465_73756299_1	chr14	+	1642	7	FSM	ENSMUSG00000022109.7	ENSMUST00000022705.7	1328	7	0	-314	0	10	multi-exon	FALSE	canonical	3	317	junction_6	14.7356333046425	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCTCTGAGATCATTA	NA	False	NA	NA	False	AATAAA	-27	NA	73747464	73756299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
ENSMUSG00000022109.7_73747465_73756299_2	chr14	+	1615	8	NNC	ENSMUSG00000022109.7	novel	1328	7	NA	NA	0	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	122.246655978637	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCTCTGAGATCATTA	NA	False	NA	NA	False	AATAAA	-27	NA	73747464	73756299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333_73755598_73755624
ENSMUSG00000022110.14_73790206_73833087_1	chr14	+	1633	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	101	495	0	-136	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	2682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGGTGGTCTCTTTTCT	NA	False	NA	14	True	TATAAA	-17	NA	73790205	73833087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ENSMUSG00000022110.14_73790206_73833087_2	chr14	+	1452	10	NIC	ENSMUSG00000022110.14	novel	1545	12	NA	NA	0	-136	combination_of_known_splicesites	FALSE	canonical	3	74	junction_1	503.772435397836	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGGTGGTCTCTTTTCT	NA	False	NA	14	True	TATAAA	-17	NA	73790205	73833087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_73790338_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ENSMUSG00000022110.14_73790206_73833087_3	chr14	+	1628	11	NNC	ENSMUSG00000022110.14	novel	1545	12	NA	NA	0	-136	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	497.739128459879	2436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGGTGGTCTCTTTTCT	NA	False	NA	14	True	TATAAA	-17	NA	73790205	73833087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806306_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ENSMUSG00000022110.14_73790206_73833228_1	chr14	+	1561	12	NNC	ENSMUSG00000022110.14	novel	1545	12	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_11	472.438355767184	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTATTCTTTAGTATAAA	NA	False	NA	NA	False	AATAAA	-18	NA	73790205	73833228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813_73832900_73833112
ENSMUSG00000022110.14_73811807_73833091_1	chr14	+	1186	8	NNC	ENSMUSG00000022110.14	novel	435	2	NA	NA	5713	-132	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	588.264448377165	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGTCTCTTTTCTTGCA	NA	False	NA	18	True	TATAAA	-21	NA	73811806	73833091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_73811932_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ENSMUSG00000022111.10_101891452_101933561_1	chr14	+	869	8	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	1518.39837745338	6458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	139	False	NA	22	True	AATAAA	-18	NA	101891451	101933561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_101891542_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
ENSMUSG00000022111.10_101891452_101933561_2	chr14	+	883	8	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1532.99751720448	6512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	139	False	NA	22	True	AATAAA	-18	NA	101891451	101933561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
ENSMUSG00000022111.10_101891452_101933561_3	chr14	+	1075	9	NIC	ENSMUSG00000022111.10	novel	935	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2079.10599402123	5710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	139	False	NA	22	True	AATAAA	-18	NA	101891451	101933561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101923006_101923199_101928007_101928084_101932594_101932654_101933337
ENSMUSG00000022111.10_101891452_101933561_4	chr14	+	835	7	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2089.29429872066	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	139	False	NA	22	True	AATAAA	-18	NA	101891451	101933561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101928007_101928084_101932594_101932654_101933337
ENSMUSG00000022120.5_104714972_104760083_1	chr14	-	3411	7	NNC	ENSMUSG00000022120.5	novel	3420	6	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	34.5333976833377	172	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTTTGATGTCATCAT	NA	False	NA	-1	True	AATAAA	-18	NA	104760083	104714971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_104715561_104715584_104717734_104740782_104740872_104743528_104743778_104745374_104745467_104747737_104747874_104759976
ENSMUSG00000022130.11_118349886_118370156_1	chr14	-	1664	11	NNC	ENSMUSG00000022130.11	novel	1682	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	55.7480044485899	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGTCTTTTTATTTTG	253	False	NA	-2	True	ATTAAA	-22	NA	118370156	118349885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118355121_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
ENSMUSG00000022141.8_8380678_8474115_1	chr15	-	2699	10	ISM	ENSMUSG00000022141.8	ENSMUST00000052965.8	9423	47	-168	60577	-168	-60577	5prime_fragment	FALSE	canonical	2	7	junction_6	4.39134952119322	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCTGAAAGCCGGCCT	NA	False	NA	99	True	AAAACA	-28	NA	8474115	8380677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395428_8396113_8396214_8398944_8399073_8401514_8401681_8403443_8403587_8473608
ENSMUSG00000022142.9_8138820_8187314_1	chr15	+	4352	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	63	3417	0	794	multi-exon	TRUE	canonical	3	205	junction_4	36.1069753346922	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTGTTGTATATCTAAG	NA	False	NA	18	True	AATAAA	-21	NA	8138819	8187314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ENSMUSG00000022151.17_5215208_5247817_1	chr15	+	1665	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	167	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTCCTTTTATTCTT	NA	False	NA	31	True	AGTAAA	-31	NA	5215207	5247817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ENSMUSG00000022159.17_52499228_52516698_1	chr14	-	2590	8	FSM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	304	12	0	0	multi-exon	FALSE	canonical	3	132	junction_5	9.75202752335772	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTACTTTTATTTCATGT	NA	False	NA	-11	True	ATTAAA	-15	NA	52516698	52499227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
ENSMUSG00000022159.17_52499228_52516811_1	chr14	-	2703	8	FSM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	191	12	-15	0	multi-exon	FALSE	canonical	3	132	junction_5	9.75202752335772	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTACTTTTATTTCATGT	NA	False	NA	-11	True	ATTAAA	-15	NA	52516811	52499227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
ENSMUSG00000022160.19_52532964_52542581_1	chr14	-	2335	10	ISM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	4	666	0	0	5prime_fragment	FALSE	canonical	3	126	junction_6	20.5666636652858	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTGCCATATTATTTGC	NA	False	NA	NA	False	ATTAAA	-21	NA	52542581	52532963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
ENSMUSG00000022174.9_54472936_54491371_1	chr14	-	507	3	NNC	ENSMUSG00000022174.9	novel	878	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	773	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTCCTTCATGTTTGTG	NA	False	NA	-11	True	ATTAAA	-24	NA	54491371	54472935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_54473024_54480189_54480326_54491088
ENSMUSG00000022174.9_54472936_54491371_2	chr14	-	678	3	NNC	ENSMUSG00000022174.9	novel	878	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	765	7036	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTCCTTCATGTTTGTG	NA	False	NA	-11	True	ATTAAA	-24	NA	54491371	54472935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_54473171_54480155_54480316_54491088
ENSMUSG00000022186.15_4056166_4183586_1	chr15	+	1986	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	301	1240	0	124	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAATTTTCATGTGCATT	NA	False	NA	19	True	ATTAAA	-19	NA	4056165	4183586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ENSMUSG00000022186.15_4056166_4184826_1	chr15	+	3221	17	NNC	ENSMUSG00000022186.15	novel	3527	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	67.3970279389232	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTGTGTGTCCTCTTA	NA	False	NA	16	True	AATAAA	-20	NA	4056165	4184826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130613_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ENSMUSG00000022186.15_4056166_4184826_2	chr15	+	3226	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	301	0	0	0	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTGTGTGTCCTCTTA	NA	False	NA	16	True	AATAAA	-20	NA	4056165	4184826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ENSMUSG00000022191.17_12824949_12883319_1	chr15	+	2635	18	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	0	-1997	intron_retention	FALSE	canonical	3	79	junction_17	141.714758103593	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGACAAGCAGAAGCTG	53	False	NA	NA	False	NA	NA	NA	12824948	12883319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251
ENSMUSG00000022191.17_12824949_12883319_2	chr15	+	2659	18	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	0	52058	0	-1997	5prime_fragment	FALSE	canonical	3	495	junction_3	68.8204121968773	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGACAAGCAGAAGCTG	53	False	NA	NA	False	NA	NA	NA	12824948	12883319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251
ENSMUSG00000022193.8_54851576_54855471_2	chr14	-	880	3	NNC	ENSMUSG00000022193.8	novel	899	3	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	927	20930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGAGTCCACAGTTATT	8632	False	NA	-17	True	AATAAA	-18	NA	54855471	54851575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_54851924_54853967_54854279_54855250
ENSMUSG00000022194.16_55131718_55136372_1	chr14	+	1663	7	FSM	ENSMUSG00000022194.16	ENSMUST00000022808.14	1030	7	113	-746	105	746	multi-exon	FALSE	canonical	3	2071	junction_6	205.041797906887	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAAAATTGGCCCTTTG	NA	False	NA	10	True	AATAAA	-9	NA	55131717	55136372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ENSMUSG00000022194.16_55131826_55136381_1	chr14	+	1564	7	FSM	ENSMUSG00000022194.16	ENSMUST00000022808.14	1030	7	221	-755	-204	755	multi-exon	FALSE	canonical	3	2071	junction_6	205.041797906887	1183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCTTTGGATGTTTTT	NA	False	NA	19	True	AATAAA	-18	NA	55131825	55136381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ENSMUSG00000022194.16_55131932_55136381_1	chr14	+	1458	7	FSM	ENSMUSG00000022194.16	ENSMUST00000022808.14	1030	7	327	-755	-98	755	multi-exon	FALSE	canonical	3	2071	junction_6	205.041797906887	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCTTTGGATGTTTTT	NA	False	NA	19	True	AATAAA	-18	NA	55131931	55136381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ENSMUSG00000022195.8_12809519_12824727_1	chr15	-	2556	8	FSM	ENSMUSG00000022195.8	ENSMUST00000227299.2	3206	8	-11	661	0	-661	multi-exon	FALSE	canonical	3	60	junction_7	97.0238767163074	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCACAACCTCACAACTCC	NA	False	NA	NA	False	NA	NA	NA	12824727	12809518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12824552
ENSMUSG00000022201.17_12117917_12146430_2	chr15	+	1060	6	ISM	ENSMUSG00000022201.17	ENSMUST00000128475.9	1115	7	-20	3206	0	128	5prime_fragment	TRUE	canonical	3	539	junction_4	43.3755691605309	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCAGATTCATTATTGTG	40	False	NA	NA	False	AATAAA	-30	NA	12117916	12146430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234
ENSMUSG00000022201.17_12117917_12184551_1	chr15	+	3632	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	0	1218	0	2	multi-exon	FALSE	canonical	1	184	junction_8	102.146464828737	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGATTTGTGCTTCAGT	40	False	NA	NA	False	ATTAAA	-17	NA	12117916	12184551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ENSMUSG00000022201.17_12117917_12185530_1	chr15	+	4611	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	0	239	0	-239	multi-exon	FALSE	canonical	1	184	junction_8	102.146464828737	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGACTTACTTGTGTT	40	False	NA	13	True	AATAAA	-13	NA	12117916	12185530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ENSMUSG00000022204.10_55253021_55261594_1	chr14	+	1085	11	NNC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	110	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	466.108453044997	3360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTTTTTGCCATACAT	NA	False	NA	18	True	AATAAA	-23	NA	55253020	55261594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259499_55259664_55260506_55260664_55260792_55260851_55261445
ENSMUSG00000022204.10_55253021_55261594_2	chr14	+	1018	10	NIC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	110	0	combination_of_known_splicesites	FALSE	canonical	2	22	junction_2	462.088976520997	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTTTTTGCCATACAT	NA	False	NA	18	True	AATAAA	-23	NA	55253020	55261594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_55253046_55253625_55253686_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ENSMUSG00000022204.10_55253021_55261594_3	chr14	+	1084	11	NNC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	110	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	466.157870254273	3147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTTTTTGCCATACAT	NA	False	NA	18	True	AATAAA	-23	NA	55253020	55261594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260798_55260851_55261445
ENSMUSG00000022204.10_55253021_55261594_4	chr14	+	1091	11	NNC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	110	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	466.108453044997	3372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTTTTTGCCATACAT	NA	False	NA	18	True	AATAAA	-23	NA	55253020	55261594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259408_55259499_55259664_55260506_55260664_55260792_55260851_55261445
ENSMUSG00000022205.16_11984127_11996098_1	chr15	-	624	5	FSM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	46	2702	0	0	multi-exon	FALSE	canonical	3	7728	junction_1	236.548620794965	21670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGAGGATTGCTTTGTG	855	False	NA	13	True	ATTAAA	-32	NA	11996098	11984126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996036
ENSMUSG00000022210.8_55716363_55727797_1	chr14	+	1244	8	FSM	ENSMUSG00000022210.8	ENSMUST00000022821.8	1392	8	148	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	11.5987332172483	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGCGTGTTTATTTCTC	NA	False	NA	11	True	AATAAA	-26	NA	55716362	55727797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724621_55724716_55724769_55725040_55725176_55725616_55725673_55727275
ENSMUSG00000022214.16_55797939_55807521_1	chr14	+	2567	15	NIC	ENSMUSG00000022214.16	novel	2660	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	31.9189023390625	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797938	55807521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_55798085_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUSG00000022216.18_55815943_55818985_1	chr14	+	977	11	NNC	ENSMUSG00000022216.18	novel	1112	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	87.713168908665	1852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTCTTTATTGTATG	NA	False	NA	14	True	AATAAA	-18	NA	55815942	55818985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_55816071_55817051_55817085_55817227_55817291_55817387_55817499_55817579_55817617_55817786_55817885_55818051_55818121_55818200_55818269_55818374_55818430_55818508_55818596_55818757
ENSMUSG00000022216.18_55818973_55822759_1	chr14	+	861	5	NIC	ENSMUSG00000022216.18	novel	439	4	NA	NA	768	3773	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTCTAATCACTCCCC	NA	False	NA	NA	False	NA	NA	NA	55818972	55822759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_55819201_55819337_55819433_55819512_55819583_55822135_55822213_55822368
ENSMUSG00000022217.15_55815913_55818985_1	chr14	-	1002	10	NNC	ENSMUSG00000022217.15	novel	855	5	NA	NA	896	3060	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGAGGAGGCGGGGACA	NA	False	NA	NA	False	NA	NA	NA	55818985	55815912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_55816090_55817227_55817291_55817387_55817499_55817570_55817617_55817786_55817885_55818051_55818121_55818200_55818269_55818374_55818430_55818508_55818596_55818757
ENSMUSG00000022217.15_55815913_55818985_2	chr14	-	1016	11	NIC	ENSMUSG00000022217.15	novel	855	5	NA	NA	896	3060	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGAGGAGGCGGGGACA	NA	False	NA	NA	False	NA	NA	NA	55818985	55815912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_55816071_55817051_55817085_55817227_55817291_55817387_55817499_55817570_55817617_55817786_55817885_55818051_55818121_55818200_55818269_55818374_55818430_55818508_55818596_55818757
ENSMUSG00000022217.15_55815943_55818985_1	chr14	-	980	11	NNC	ENSMUSG00000022217.15	novel	855	5	NA	NA	896	3030	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGGCCTTCCTGGGTTTGG	NA	False	NA	NA	False	NA	NA	NA	55818985	55815942	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_55816071_55817051_55817085_55817227_55817291_55817387_55817499_55817570_55817617_55817786_55817885_55818051_55818121_55818206_55818269_55818374_55818430_55818508_55818596_55818757
ENSMUSG00000022217.15_55815943_55818985_2	chr14	-	966	10	NNC	ENSMUSG00000022217.15	novel	855	5	NA	NA	896	3030	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGGCCTTCCTGGGTTTGG	NA	False	NA	NA	False	NA	NA	NA	55818985	55815942	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_55816084_55817227_55817291_55817387_55817499_55817570_55817617_55817786_55817885_55818051_55818121_55818200_55818269_55818374_55818430_55818508_55818596_55818757
ENSMUSG00000022218.17_55937491_55946644_1	chr14	-	1627	8	ISM	ENSMUSG00000022218.17	ENSMUST00000002389.9	2791	15	3901	15	3901	0	3prime_fragment	FALSE	canonical	3	193	junction_5	14.0610911992735	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCTGTTTAGTAGTCCT	4703	False	NA	-23	True	AATAAA	-22	NA	55946644	55937490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339
ENSMUSG00000022221.15_56022454_56026276_1	chr14	-	2079	9	ISM	ENSMUSG00000022221.15	ENSMUST00000178399.3	1865	10	38	0	-31	0	intron_retention	FALSE	canonical	3	118	junction_2	9.25928587959136	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGTCTGAGGTGTCAA	NA	False	NA	-3	True	AATAAA	-18	NA	56026276	56022453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694
ENSMUSG00000022236.11_31441357_31453760_1	chr15	-	834	5	FSM	ENSMUSG00000022236.11	ENSMUST00000110408.3	957	5	123	0	123	0	multi-exon	FALSE	canonical	0	0	junction_1	1.6583123951777	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGAGTTTTTCTCAGA	NA	False	NA	NA	False	AATACA	-17	NA	31453760	31441356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_31441527_31443437_31443614_31449109_31449272_31451227_31451352_31453558
ENSMUSG00000022241.7_11383746_11399775_1	chr15	-	2670	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	-24	1359	-24	345	multi-exon	FALSE	canonical	3	2899	junction_10	215.823487548918	5558	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACCTCTGTCCTCACG	NA	False	NA	-5	True	AATAAA	-18	NA	11399775	11383745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ENSMUSG00000022244.8_10981842_10995693_1	chr15	+	1558	5	FSM	ENSMUSG00000022244.8	ENSMUST00000070877.7	2577	5	0	1019	0	600	multi-exon	FALSE	canonical	3	110	junction_2	9.36416040016402	407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAGTGGTTTTAAGTT	49	False	NA	35	True	AATAAA	-45	NA	10981841	10995693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_10982140_10983435_10983580_10984771_10984933_10988844_10989032_10994925
ENSMUSG00000022247.13_10474865_10485995_1	chr15	-	2601	11	NNC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	734.144427207617	6075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATAAGGCTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	10485995	10474864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_10475136_10475160_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
ENSMUSG00000022247.13_10476267_10485995_1	chr15	-	1217	10	NNC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	0	-1402	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_2	761.426941770726	5360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTACTTTATTCTTTTC	NA	False	NA	-11	True	AATAAA	-14	NA	10485995	10476266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_10476683_10476892_10477015_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
ENSMUSG00000022247.13_10476267_10485995_2	chr15	-	1211	10	NNC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	0	-1402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	771.639012383445	2454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTACTTTATTCTTTTC	NA	False	NA	-11	True	AATAAA	-14	NA	10485995	10476266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479171_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
ENSMUSG00000022247.13_10476267_10485995_3	chr15	-	1208	9	NNC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	0	-1402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	813.011531283536	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTACTTTATTCTTTTC	NA	False	NA	-11	True	AATAAA	-14	NA	10485995	10476266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_10476683_10476892_10477022_10478754_10478876_10479142_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
ENSMUSG00000022247.13_10476267_10485995_4	chr15	-	1286	11	NIC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	0	-1402	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	951.468281131852	3941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTACTTTATTCTTTTC	NA	False	NA	-11	True	AATAAA	-14	NA	10485995	10476266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485440_10485503_10485820
ENSMUSG00000022248.15_10486104_10493763_1	chr15	+	1264	6	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	302.072574061268	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCGACTTACTGTACTG	4	True	NA	15	True	AATAAA	-20	NA	10486103	10493763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_10486113_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
ENSMUSG00000022248.15_10486135_10493763_1	chr15	+	1578	6	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	0	3	intron_retention	FALSE	canonical	0	0	junction_5	316.528039832177	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCGACTTACTGTACTG	35	False	NA	15	True	AATAAA	-20	NA	10486134	10493763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239_10493477_10493557
ENSMUSG00000022248.15_10486135_10493763_4	chr15	+	1201	7	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	358.631658762395	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCGACTTACTGTACTG	35	False	NA	15	True	AATAAA	-20	NA	10486134	10493763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_10486162_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239_10493477_10493557
ENSMUSG00000022257.5_34238295_34284448_1	chr15	+	1781	7	FSM	ENSMUSG00000022257.5	ENSMUST00000022867.5	1902	7	121	0	0	0	multi-exon	FALSE	canonical	3	358	junction_4	34.9698282650757	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGTGGCTCCGCTGACT	111	False	NA	NA	False	ATTAAA	-22	NA	34238294	34284448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277674_34283445
ENSMUSG00000022283.16_36595905_36609217_1	chr15	-	572	2	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	377	False	NA	-7	True	AATAAA	-16	NA	36609217	36595904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_36596307_36609047
ENSMUSG00000022283.16_36595905_36609217_2	chr15	-	580	2	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	377	False	NA	-7	True	AATAAA	-16	NA	36609217	36595904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_36596302_36609034
ENSMUSG00000022283.16_36596268_36609217_2	chr15	-	2454	15	FSM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	0	363	0	0	multi-exon	FALSE	canonical	3	5069	junction_10	538.55476006794	1747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGAAAAAAAACATTGCAAA	377	False	NA	NA	False	AAGAAA	-32	NA	36609217	36596267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ENSMUSG00000022285.18_36771014_36793812_1	chr15	-	2787	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	269	-934	-49	0	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	10703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	709	False	NA	-39	True	NA	NA	NA	36793812	36771013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
ENSMUSG00000022285.18_36771193_36793812_1	chr15	-	2608	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	269	-755	-49	-179	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	8380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTACCGAGTATTTCCT	709	False	NA	-85	True	GGGGCT	-20	NA	36793812	36771192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
ENSMUSG00000022285.18_36771948_36793812_1	chr15	-	1853	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	269	0	-49	0	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	2465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCAACTACTTTTCTCT	709	False	NA	-12	True	NA	NA	NA	36793812	36771947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
ENSMUSG00000022285.18_36771948_36794508_1	chr15	-	2080	7	FSM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	274	934	267	0	multi-exon	FALSE	canonical	3	85	junction_6	1526.66484716049	4306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCAACTACTTTTCTCT	13	True	NA	-12	True	NA	NA	NA	36794508	36771947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793920_36794388
ENSMUSG00000022286.17_37347985_37361940_1	chr15	+	1139	3	ISM	ENSMUSG00000022286.17	ENSMUST00000161933.2	3617	9	29338	1866	12004	756	3prime_fragment	FALSE	canonical	3	68	junction_1	5	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCCTCAAGCATGACTC	219	False	NA	NA	False	NA	NA	NA	37347984	37361940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_37348099_37358613_37358679_37360980
ENSMUSG00000022286.17_37347985_37363807_1	chr15	+	3006	3	ISM	ENSMUSG00000022286.17	ENSMUST00000161933.2	3617	9	29338	-1	12004	1	3prime_fragment	FALSE	canonical	3	68	junction_1	5	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAACAGCTCTCTAGTAC	219	False	NA	14	True	AATAAA	-15	NA	37347984	37363807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_37348099_37358613_37358679_37360980
ENSMUSG00000022292.17_37929258_37961250_1	chr15	-	1042	8	ISM	ENSMUSG00000022292.17	ENSMUST00000022901.16	4561	9	97	5062	-77	-1769	5prime_fragment	FALSE	canonical	3	32	junction_3	9.17850194526229	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTAGTGGTTTTAGTTAC	7205	False	NA	NA	False	AATAAA	-16	NA	37961250	37929257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_37929396_37931845_37931951_37937459_37937594_37944741_37944837_37945282_37945417_37946978_37947096_37953842_37953999_37961087
ENSMUSG00000022295.9_38662188_38691971_1	chr15	+	1341	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	11	719	0	-716	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCCTTGTGTTGGTGT	195	False	NA	14	True	AGTAAA	-20	NA	38662187	38691971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ENSMUSG00000022295.9_38662188_38692442_1	chr15	+	1812	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	11	248	0	-245	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	2435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTGTGACTTGAG	195	False	NA	6	True	AATAAA	-16	NA	38662187	38692442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ENSMUSG00000022300.11_38976260_39010251_2	chr15	+	1546	11	NNC	ENSMUSG00000022300.11	novel	1551	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	239.956579405525	2981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCAGTTGTGTGTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	38976259	39010251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_38976447_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007022_39007154_39008485_39008650_39010067
ENSMUSG00000022300.11_38976260_39010251_3	chr15	+	1548	11	NNC	ENSMUSG00000022300.11	novel	1551	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	312.753721001046	3005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCAGTTGTGTGTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	38976259	39010251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_38976447_38982112_38982310_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
ENSMUSG00000022300.11_38976260_39010251_5	chr15	+	1540	11	NNC	ENSMUSG00000022300.11	novel	1551	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	234.723859034398	3001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCAGTTGTGTGTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	38976259	39010251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_38976447_38982105_38982295_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
ENSMUSG00000022304.14_39646093_39648265_1	chr15	-	714	2	ISM	ENSMUSG00000022304.14	ENSMUST00000110306.9	2110	10	72601	0	8382	0	3prime_fragment	FALSE	canonical	3	216	junction_1	0	616	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTGTCTGAGTTCCAT	NA	False	NA	NA	False	AATAAA	-22	NA	39648265	39646092	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_39646506_39647964
ENSMUSG00000022312.12_51649954_51728879_1	chr15	-	1250	8	NNC	ENSMUSG00000022312.12	novel	1295	8	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	1	59	junction_1	653.585589229888	12678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTGTATTTATGGTG	NA	False	NA	-12	True	AATAAA	-24	NA	51728879	51649953	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_51650217_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
ENSMUSG00000022312.12_51650078_51728879_1	chr15	-	1131	8	FSM	ENSMUSG00000022312.12	ENSMUST00000022925.10	1295	8	40	124	-29	0	multi-exon	FALSE	canonical	3	1820	junction_5	77.7200628104822	6868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCACAGAGTGCACTTGGA	NA	False	NA	-136	True	AAGAAA	-43	NA	51728879	51650077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
ENSMUSG00000022313.11_51740874_51746080_1	chr15	+	942	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	49	1930	0	0	multi-exon	FALSE	canonical	3	321	junction_1	13	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCATCTTCAGTTGTTG	NA	False	NA	22	True	AGTAAA	-19	NA	51740873	51746080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_51741107_51744411_51744587_51745546
ENSMUSG00000022314.11_51835182_51855143_1	chr15	-	1129	8	ISM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	0	9546	0	2051	5prime_fragment	FALSE	canonical	3	565	junction_7	87.3636547041463	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGAAGCTTTTGCGTT	NA	False	NA	NA	False	NA	NA	NA	51855143	51835181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ENSMUSG00000022322.9_4814612_4829554_1	chr8	-	896	4	ISM	ENSMUSG00000022322.9	ENSMUST00000208856.2	2365	12	-3	28382	0	0	5prime_fragment	FALSE	canonical	3	272	junction_2	23.7205958328763	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAGTTGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4829554	4814611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_4815090_4817906_4818023_4818143_4818312_4829420
ENSMUSG00000022323.12_34484167_34495350_1	chr15	-	952	6	NNC	ENSMUSG00000022323.12	novel	1004	6	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.464394365506	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTTAATTTTGTTC	NA	False	NA	-10	True	AATAAA	-21	NA	34495350	34484166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_34484677_34485741_34485802_34486756_34486826_34487887_34487943_34488719_34488826_34495198
ENSMUSG00000022329.16_34875642_35155839_1	chr15	-	2801	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	113	0	-24	0	multi-exon	FALSE	canonical	3	204	junction_2	35.5343495789637	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTTGTTGTTATTGT	NA	False	NA	2	True	AATAAA	-21	NA	35155839	34875641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
ENSMUSG00000022329.16_34875819_35155839_1	chr15	-	2624	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	113	177	-24	0	multi-exon	FALSE	canonical	3	204	junction_2	35.5343495789637	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAGTATTAGAAAAAGAC	NA	False	NA	NA	False	ACTAAA	-33	NA	35155839	34875818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
ENSMUSG00000022329.16_34876665_35155839_1	chr15	-	1778	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	113	1023	-24	-846	multi-exon	FALSE	canonical	3	204	junction_2	35.5343495789637	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAACTTTACAGTTGTCT	NA	False	NA	NA	False	GATAAA	-10	NA	35155839	34876664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
ENSMUSG00000022329.16_35114146_35155896_1	chr15	-	654	4	NNC	ENSMUSG00000022329.16	novel	2914	11	NA	NA	0	-41521	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.022399410572	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTAAGATTTCATTTT	NA	False	NA	NA	False	AATATA	-21	NA	35155896	35114145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_35114366_35114674_35114804_35115710_35115792_35155672
ENSMUSG00000022336.4_43113454_43145846_1	chr15	-	1449	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	176	0	at_least_one_novel_splicesite	TRUE	canonical	3	93	junction_12	740.976434435596	811	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTTGCTTGAATT	2932	False	NA	-22	True	AATAAA	-16	NA	43145846	43113453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145786
ENSMUSG00000022336.4_43113454_43146115_1	chr15	-	1497	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	766.25940269743	5281	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTTGCTTGAATT	2663	False	NA	-22	True	AATAAA	-16	NA	43146115	43113453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43146007
ENSMUSG00000022336.4_43113454_43146115_2	chr15	-	1498	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	764.90865013775	5912	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTTGCTTGAATT	2663	False	NA	-22	True	AATAAA	-16	NA	43146115	43113453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_43113634_43114875_43115011_43115600_43115696_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ENSMUSG00000022336.4_43113454_43146115_3	chr15	-	1499	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	762.505787774027	4383	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTTGCTTGAATT	2663	False	NA	-22	True	AATAAA	-16	NA	43146115	43113453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129649_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ENSMUSG00000022336.4_43113454_43146115_4	chr15	-	1503	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	762.505787774027	7272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTTGCTTGAATT	2663	False	NA	-22	True	AATAAA	-16	NA	43146115	43113453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129649_43134270_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ENSMUSG00000022336.4_43113454_43146115_5	chr15	-	1513	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	756.362838230142	8143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTTGCTTGAATT	2663	False	NA	-22	True	AATAAA	-16	NA	43146115	43113453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135664_43135715_43138632_43138751_43141703_43141819_43145998
ENSMUSG00000022336.4_43113454_43146115_6	chr15	-	1422	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	764.753496050997	740	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTTGCTTGAATT	2663	False	NA	-22	True	AATAAA	-16	NA	43146115	43113453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43128938_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ENSMUSG00000022336.4_43113454_43146115_7	chr15	-	1499	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	762.100696904433	3235	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTTGCTTGAATT	2663	False	NA	-22	True	AATAAA	-16	NA	43146115	43113453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138744_43141703_43141819_43145998
ENSMUSG00000022336.4_43113454_43146115_8	chr15	-	1716	14	NIC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	986.125998646776	866	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTTGCTTGAATT	2663	False	NA	-22	True	AATAAA	-16	NA	43146115	43113453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43144414_43144625_43145998
ENSMUSG00000022337.8_43340637_43391159_1	chr15	+	1211	11	NNC	ENSMUSG00000022337.8	novel	1231	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	228.935995422301	3442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGAAAATTCTAGTTTC	NA	False	NA	10	True	AATAAA	-20	NA	43340636	43391159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371048_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ENSMUSG00000022337.8_43340637_43391159_2	chr15	+	1212	11	NNC	ENSMUSG00000022337.8	novel	1231	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	228.904259462335	3445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGAAAATTCTAGTTTC	NA	False	NA	10	True	AATAAA	-20	NA	43340636	43391159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390799
ENSMUSG00000022337.8_43340637_43391159_3	chr15	+	1211	11	NNC	ENSMUSG00000022337.8	novel	1231	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	228.907164588617	3442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGAAAATTCTAGTTTC	NA	False	NA	10	True	AATAAA	-20	NA	43340636	43391159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377148_43377246_43390792
ENSMUSG00000022338.9_44291488_44299263_1	chr15	+	630	5	FSM	ENSMUSG00000022338.9	ENSMUST00000060652.5	3000	5	-19	2389	0	0	multi-exon	FALSE	canonical	3	627	junction_1	138.867742834684	2816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAATTTTTTTATTTTG	9616	False	NA	13	True	AATAAA	-15	NA	44291487	44299263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ENSMUSG00000022338.9_44291543_44299251_1	chr15	+	563	5	FSM	ENSMUSG00000022338.9	ENSMUST00000060652.5	3000	5	36	2401	0	0	multi-exon	FALSE	canonical	3	627	junction_1	138.867742834684	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATGAATGAGTTTCAAT	9671	False	NA	1	True	AATAAA	-3	NA	44291542	44299251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ENSMUSG00000022350.8_59231112_59246036_1	chr15	-	1417	9	ISM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	-20	27266	-20	-27266	5prime_fragment	FALSE	canonical	3	410	junction_2	42.0711822391527	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGCACCCTGCTTCACA	NA	False	NA	NA	False	NA	NA	NA	59246036	59231111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ENSMUSG00000022359.11_58004773_58022050_1	chr15	+	1109	4	FSM	ENSMUSG00000022359.11	ENSMUST00000226889.2	394	4	-60	-655	0	0	multi-exon	FALSE	canonical	0	0	junction_3	30.9228430488243	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTTTTGAAGAATCTG	2660	False	NA	27	True	AATAAA	-17	NA	58004772	58022050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58021297
ENSMUSG00000022359.11_58004773_58022050_2	chr15	+	1234	5	FSM	ENSMUSG00000022359.11	ENSMUST00000228761.2	798	5	-15	-421	0	0	multi-exon	FALSE	canonical	3	22	junction_3	18.5	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTTTTGAAGAATCTG	2660	False	NA	27	True	AATAAA	-17	NA	58004772	58022050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58016975_58017101_58021297
ENSMUSG00000022364.15_57775630_57833458_1	chr15	+	3472	22	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	77	junction_18	60.8888806130719	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57775629	57833458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ENSMUSG00000022364.15_57775630_57833458_3	chr15	+	3161	20	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	59.3076396586785	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57775629	57833458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ENSMUSG00000022364.15_57827090_57833458_1	chr15	+	570	2	NIC	ENSMUSG00000022364.15	novel	914	6	NA	NA	5281	1	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57827089	57833458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_57827321_57833119
ENSMUSG00000022364.15_57827490_57833458_1	chr15	+	550	3	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	5681	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	176.5	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57827489	57833458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_57827605_57831304_57831401_57833119
ENSMUSG00000022364.15_57830449_57833458_1	chr15	+	645	3	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	8640	1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	173	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57830448	57833458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_57830659_57831304_57831401_57833119
ENSMUSG00000022364.15_57831752_57833458_1	chr15	+	414	2	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	9943	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57831751	57833458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_57831827_57833119
ENSMUSG00000022370.14_55397490_55420709_1	chr15	-	780	7	NNC	ENSMUSG00000022370.14	novel	1223	7	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	369.328670247338	3506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	0	True	AATAAA	-20	NA	55420709	55397489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406773_55411537_55411632_55418715_55418840_55420653
ENSMUSG00000022370.14_55420991_55489819_1	chr15	-	2957	22	NIC	ENSMUSG00000022370.14	novel	1223	7	NA	NA	-68675	-8141	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCTCAAAAGAGCCGCGC	NA	False	NA	NA	False	NA	NA	NA	55489819	55420990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
ENSMUSG00000022391.17_81588454_81614072_1	chr15	-	2894	16	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_15	198.398140672291	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614072	81588453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608827_81613912
ENSMUSG00000022391.17_81588454_81614072_2	chr15	-	2901	16	FSM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	132	0	9	0	multi-exon	FALSE	canonical	3	698	junction_15	51.7762708412089	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614072	81588453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ENSMUSG00000022391.17_81588812_81614072_1	chr15	-	2543	16	FSM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	132	358	9	0	multi-exon	FALSE	canonical	3	698	junction_15	51.7762708412089	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81614072	81588811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ENSMUSG00000022391.17_81589090_81614072_1	chr15	-	2265	16	FSM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	132	636	9	-278	multi-exon	FALSE	canonical	3	698	junction_15	51.7762708412089	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATAGGCCCCGTTGGCTG	NA	False	NA	-29	True	ATTAAA	-15	NA	81614072	81589089	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ENSMUSG00000022400.10_81350545_81359462_1	chr15	+	519	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	48	1108	0	-125	multi-exon	FALSE	canonical	3	4160	junction_1	231.400491572512	17173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTGCTGTTTCATGTA	NA	False	NA	15	True	AATAAA	-15	NA	81350544	81359462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ENSMUSG00000022400.10_81350545_81359924_1	chr15	+	981	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	48	646	0	151	multi-exon	FALSE	canonical	3	4160	junction_1	231.400491572512	17552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTTTGGACAGTTTGC	NA	False	NA	12	True	AATAAA	-25	NA	81350544	81359924	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ENSMUSG00000022400.10_81350842_81359462_1	chr15	+	526	5	FSM	ENSMUSG00000022400.10	ENSMUST00000230062.2	651	5	0	125	0	-125	multi-exon	FALSE	canonical	3	348	junction_1	1851.90407081468	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTGCTGTTTCATGTA	NA	False	NA	15	True	AATAAA	-15	NA	81350841	81359462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_81350956_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ENSMUSG00000022403.16_81247870_81283883_1	chr15	-	2984	12	NNC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	740.252882857279	7134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGACCTTCCCCCATTT	NA	False	NA	-19	True	AATAAA	-18	NA	81283883	81247869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262197_81267176_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ENSMUSG00000022403.16_81247870_81283883_2	chr15	-	2978	12	NNC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	742.904718983265	5220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGACCTTCCCCCATTT	NA	False	NA	-19	True	AATAAA	-18	NA	81283883	81247869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81249780_81250547_81250691_81253594_81253637_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ENSMUSG00000022403.16_81249245_81283883_1	chr15	-	1609	12	NNC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-88	406	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	740.252882857279	3726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGGTTCCTGAAGTATC	NA	False	NA	-30	True	AATAAA	-25	NA	81283883	81249244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262197_81267176_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ENSMUSG00000022403.16_81249245_81283883_3	chr15	-	1601	12	NNC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-88	406	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	741.456718976706	2629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGGTTCCTGAAGTATC	NA	False	NA	-30	True	AATAAA	-25	NA	81283883	81249244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267239_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ENSMUSG00000022403.16_81249245_81283883_5	chr15	-	1603	12	NNC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-88	406	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	742.904718983265	1857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGGTTCCTGAAGTATC	NA	False	NA	-30	True	AATAAA	-25	NA	81283883	81249244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81249780_81250547_81250691_81253594_81253637_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ENSMUSG00000022403.16_81249245_81283883_6	chr15	-	1600	12	NNC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-88	406	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	735.228608963237	1817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGGTTCCTGAAGTATC	NA	False	NA	-30	True	AATAAA	-25	NA	81283883	81249244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261898_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ENSMUSG00000022403.16_81249245_81283883_7	chr15	-	1561	11	NIC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-88	406	combination_of_known_splicesites	FALSE	canonical	3	103	junction_2	742.189086419357	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGGTTCCTGAAGTATC	NA	False	NA	-30	True	AATAAA	-25	NA	81283883	81249244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_81249780_81250547_81250691_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ENSMUSG00000022403.16_81249245_81284244_2	chr15	-	1667	12	NIC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	0	406	combination_of_known_junctions	FALSE	canonical	3	177	junction_11	682.393841833219	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGGTTCCTGAAGTATC	NA	False	NA	-30	True	AATAAA	-25	NA	81284244	81249244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283989
ENSMUSG00000022404.9_81203582_81244982_1	chr15	-	1223	9	FSM	ENSMUSG00000022404.9	ENSMUST00000023040.9	1724	9	31	470	-4	230	multi-exon	FALSE	canonical	3	302	junction_6	19.7638400873919	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTTTGTGGGTGTTCA	6879	False	NA	NA	False	NA	NA	NA	81244982	81203581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
ENSMUSG00000022407.11_80832705_80853014_1	chr15	+	1564	13	FSM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	14	2133	0	58	multi-exon	FALSE	canonical	3	932	junction_8	68.052471585453	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTTCTGCGGCACT	NA	False	NA	19	True	NA	NA	NA	80832704	80853014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ENSMUSG00000022407.11_80832705_80853335_1	chr15	+	1805	12	NIC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	0	15	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	304.280970635544	2796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTACATTAAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	80832704	80853335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_80832902_80836397_80836602_80839820_80839866_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ENSMUSG00000022407.11_80832705_80853335_2	chr15	+	1885	13	FSM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	14	1812	0	15	multi-exon	FALSE	canonical	3	932	junction_8	68.052471585453	3737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTACATTAAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	80832704	80853335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ENSMUSG00000022407.11_80832705_80853505_1	chr15	+	2055	13	FSM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	14	1642	0	185	multi-exon	FALSE	canonical	3	932	junction_8	68.052471585453	3939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTGTTTTATATTT	NA	False	NA	3	True	NA	NA	NA	80832704	80853505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ENSMUSG00000022412.15_80118294_80134243_3	chr15	+	1744	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	75	3329	0	-523	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGCAGAGCTCACCCC	2828	False	NA	NA	False	NA	NA	NA	80118293	80134243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ENSMUSG00000022415.13_79975545_79998205_1	chr15	+	1372	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	10	-563	0	563	multi-exon	FALSE	canonical	3	1267	junction_2	72.7232195840274	2100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCATTCATTCATTCA	NA	False	NA	8	True	NA	NA	NA	79975544	79998205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_79997366
ENSMUSG00000022420.17_79645654_79658629_1	chr15	-	1500	5	ISM	ENSMUSG00000022420.17	ENSMUST00000162713.9	1357	7	2544	-684	-12	0	3prime_fragment	FALSE	canonical	3	63	junction_3	39.8591269347436	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTGTGGTGTATTGA	282	False	NA	NA	False	ATTAAA	-17	NA	79658629	79645653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_79646727_79647710_79647795_79649016_79649223_79649987_79650055_79658559
ENSMUSG00000022427.5_79555082_79557068_1	chr15	+	1007	4	NNC	ENSMUSG00000022427.5	novel	1569	4	NA	NA	0	187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	430.226555304166	8371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTATTGCTGTGTTTGTG	8198	False	NA	21	True	ATTAAA	-17	NA	79555081	79557068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_79555210_79555382_79555493_79556097_79556216_79556417
ENSMUSG00000022427.5_79555082_79557068_2	chr15	+	897	3	FSM	ENSMUSG00000022427.5	ENSMUST00000229502.2	595	3	0	-302	0	187	multi-exon	FALSE	canonical	2	12	junction_1	445.5	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTATTGCTGTGTTTGTG	8198	False	NA	21	True	ATTAAA	-17	NA	79555081	79557068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_79555210_79556097_79556216_79556417
ENSMUSG00000022427.5_79555082_79557068_3	chr15	+	1006	4	NNC	ENSMUSG00000022427.5	novel	1569	4	NA	NA	0	187	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	459.383161303164	7939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTATTGCTGTGTTTGTG	8198	False	NA	21	True	ATTAAA	-17	NA	79555081	79557068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_79555210_79555373_79555493_79556097_79556216_79556427
ENSMUSG00000022427.5_79555082_79557068_4	chr15	+	1016	4	NNC	ENSMUSG00000022427.5	novel	1569	4	NA	NA	0	187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	462.198610508032	8623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTATTGCTGTGTTTGTG	8198	False	NA	21	True	ATTAAA	-17	NA	79555081	79557068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_79555210_79555373_79555493_79556097_79556226_79556427
ENSMUSG00000022427.5_79555082_79557068_5	chr15	+	1017	4	NNC	ENSMUSG00000022427.5	novel	1569	4	NA	NA	0	187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	462.198610508032	2960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTATTGCTGTGTTTGTG	8198	False	NA	21	True	ATTAAA	-17	NA	79555081	79557068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_79555210_79555373_79555493_79556097_79556239_79556439
ENSMUSG00000022429.12_79483855_79489300_1	chr15	-	806	4	ISM	ENSMUSG00000022429.12	ENSMUST00000229408.2	1931	12	0	38043	0	-37271	5prime_fragment	FALSE	canonical	3	81	junction_3	2.82842712474619	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACCTTTATACTACTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	79489300	79483854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_79484394_79485717_79485763_79486601_79486686_79489162
ENSMUSG00000022433.22_79302056_79339767_1	chr15	-	2703	11	NIC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	155.61375260561	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCCTCTGTCTGCCTCT	8429	False	NA	-4	True	AATAAA	-24	NA	79339767	79302055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79339690
ENSMUSG00000022436.17_78783968_78796251_1	chr15	+	1923	18	FSM	ENSMUSG00000022436.17	ENSMUST00000109698.9	1923	18	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_17	114.336569876277	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAACTGGCCAAACGAAAA	4398	False	NA	87	True	AATAAA	-20	NA	78783967	78796251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78796129
ENSMUSG00000022437.8_84076442_84098505_1	chr15	+	1659	15	NNC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	0	-2963	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	485.893559352672	2958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGTCCTGGATGTGGTC	NA	False	NA	28	True	AATAAA	-14	NA	84076441	84098505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084912_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ENSMUSG00000022437.8_84076442_84098505_2	chr15	+	1666	15	FSM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	0	2963	0	-2963	multi-exon	FALSE	canonical	3	1573	junction_6	135.39963524504	2956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGTCCTGGATGTGGTC	NA	False	NA	28	True	AATAAA	-14	NA	84076441	84098505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ENSMUSG00000022437.8_84076442_84098505_3	chr15	+	1661	15	NNC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	0	-2963	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	482.592768918314	2958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGTCCTGGATGTGGTC	NA	False	NA	28	True	AATAAA	-14	NA	84076441	84098505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095242_84095380_84098326
ENSMUSG00000022438.7_84116267_84197511_2	chr15	+	1383	13	FSM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	23	2378	0	-2378	multi-exon	FALSE	canonical	3	64	junction_4	7.38052994182818	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCCTCCCCCCCCCCCCC	NA	False	NA	NA	False	NA	NA	NA	84116266	84197511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179817_84182166_84182187_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
ENSMUSG00000022438.7_84116267_84197729_1	chr15	+	1601	13	FSM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	23	2160	0	-2160	multi-exon	FALSE	canonical	3	64	junction_4	7.38052994182818	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCACTCCTGAGTCTC	NA	False	NA	12	True	AGTAAA	-15	NA	84116266	84197729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179817_84182166_84182187_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
ENSMUSG00000022438.7_84116267_84197729_2	chr15	+	1608	12	NNC	ENSMUSG00000022438.7	novel	3784	13	NA	NA	0	-2160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	23.3099843822519	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCACTCCTGAGTCTC	NA	False	NA	12	True	AGTAAA	-15	NA	84116266	84197729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179844_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
ENSMUSG00000022443.18_77644787_77651786_1	chr15	-	2774	10	ISM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	74589	0	-396	0	3prime_fragment	FALSE	canonical	3	493	junction_9	40.0900221569309	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGTGTCTGGGTGTTT	8060	False	NA	-2	True	AATAAA	-17	NA	77651786	77644786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650
ENSMUSG00000022443.18_77664234_77726375_1	chr15	-	2423	18	ISM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	0	19447	0	-5999	5prime_fragment	FALSE	canonical	3	307	junction_4	37.1475129216341	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGAAGGGCTTCATGGAT	NA	False	NA	NA	False	NA	NA	NA	77726375	77664233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ENSMUSG00000022451.13_94477098_94487760_1	chr15	-	1759	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	0	1266	0	449	multi-exon	FALSE	canonical	3	499	junction_8	20.6333316505115	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCGCCCCCCTGCACTG	NA	False	NA	NA	False	NA	NA	NA	94487760	94477097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ENSMUSG00000022452.17_82230278_82233266_1	chr15	+	550	3	NNC	ENSMUSG00000022452.17	novel	705	3	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	801.5	3265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCGTCCCCATTTCTCA	NA	False	NA	36	True	AATAAA	-18	NA	82230277	82233266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_82230471_82232100_82232242_82233050
ENSMUSG00000022453.9_82213733_82223017_1	chr15	-	1826	9	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	2	29	junction_8	84.7758072801433	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGGGTACTATGACCTG	1354	False	NA	0	True	AATAAA	-31	NA	82223017	82213732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222952
ENSMUSG00000022453.9_82213733_82223017_2	chr15	-	1877	10	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	84.6325390536445	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGGGTACTATGACCTG	1354	False	NA	0	True	AATAAA	-31	NA	82223017	82213732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221698_82222438_82222516_82222952
ENSMUSG00000022453.9_82218653_82223017_1	chr15	-	1219	7	FSM	ENSMUSG00000022453.9	ENSMUST00000230380.2	1020	7	-34	-165	-9	165	multi-exon	FALSE	canonical	3	267	junction_3	11.7106314470608	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGTGTTGGGGTCTTC	1354	False	NA	NA	False	ACTAAA	-14	NA	82223017	82218652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
ENSMUSG00000022462.8_96586013_96597611_1	chr15	-	3920	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	0	740	0	-740	multi-exon	FALSE	canonical	3	252	junction_15	32.8196418153655	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGGGAGCAAGGTTCC	NA	False	NA	NA	False	NA	NA	NA	96597611	96586012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
ENSMUSG00000022463.9_82031447_82058109_1	chr15	+	1270	2	NNC	ENSMUSG00000022463.9	novel	2664	3	NA	NA	0	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	18635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGAAGTGTGACTGTGC	2238	False	NA	NA	False	NA	NA	NA	82031446	82058109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_82031574_82056966
ENSMUSG00000022464.15_96893527_96953837_1	chr15	-	3109	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	0	823	0	-823	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACATTGCTCACATCCAT	NA	False	NA	NA	False	AATAAA	-20	NA	96953837	96893526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ENSMUSG00000022464.15_96894649_96953837_1	chr15	-	1987	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	0	1945	0	0	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	1582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGCCGTGCAGTGCAGT	NA	False	NA	-12	True	ATTAAA	-23	NA	96953837	96894648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ENSMUSG00000022466.7_97572978_97603706_1	chr15	-	2268	17	NNC	ENSMUSG00000022466.7	novel	2271	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	81.9067448001079	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGTCGATATTTCATTT	NA	False	NA	-3	True	AATAAA	-25	NA	97603706	97572977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578396_97579495_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ENSMUSG00000022471.15_81900570_81924286_1	chr15	+	2025	12	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	28	junction_1	190.783291885872	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGCACTTTTCAGTAT	NA	False	NA	29	True	AATAAA	-15	NA	81900569	81924286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_81900677_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ENSMUSG00000022474.16_81835309_81845061_1	chr15	-	1235	8	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	379.844973748018	3887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845061	81835308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81835819_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ENSMUSG00000022474.16_81835309_81845061_2	chr15	-	1224	8	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	393.44013884852	4247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845061	81835308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81835814_81836124_81836241_81836925_81836996_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ENSMUSG00000022474.16_81835309_81845061_3	chr15	-	1225	8	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	380.532709313067	4296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845061	81835308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81835814_81836129_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ENSMUSG00000022474.16_81835309_81845061_4	chr15	-	1222	8	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	385.692115764978	3072	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845061	81835308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840632_81841993_81842112_81844915
ENSMUSG00000022474.16_81835309_81845061_5	chr15	-	1198	8	NIC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	2	45	junction_2	377.353891173357	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845061	81835308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_81835814_81836124_81836209_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ENSMUSG00000022474.16_81835309_81845061_6	chr15	-	1098	7	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	406.485922948822	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845061	81835308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81842048_81842112_81844915
ENSMUSG00000022474.16_81835309_81845061_7	chr15	-	1049	6	NNC	ENSMUSG00000022474.16	novel	1059	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	428.383659819093	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845061	81835308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81844901
ENSMUSG00000022474.16_81835309_81845061_8	chr15	-	1229	8	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	385.934751807946	1762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845061	81835308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842097_81844901
ENSMUSG00000022476.9_81756685_81799334_1	chr15	-	2736	18	NNC	ENSMUSG00000022476.9	novel	2542	6	NA	NA	-4	15744	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3690	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGACGTGACAAATGG	NA	False	NA	NA	False	NA	NA	NA	81799334	81756684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797313_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022476.9_81756685_81799334_2	chr15	-	2734	18	NNC	ENSMUSG00000022476.9	novel	2542	6	NA	NA	-4	15744	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGACGTGACAAATGG	NA	False	NA	NA	False	NA	NA	NA	81799334	81756684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798837
ENSMUSG00000022476.9_81756685_81799334_3	chr15	-	2599	17	NNC	ENSMUSG00000022476.9	novel	2542	6	NA	NA	-4	15744	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGACGTGACAAATGG	NA	False	NA	NA	False	NA	NA	NA	81799334	81756684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793779_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022476.9_81756685_81799334_4	chr15	-	2737	18	NNC	ENSMUSG00000022476.9	novel	2542	6	NA	NA	-4	15744	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGACGTGACAAATGG	NA	False	NA	NA	False	NA	NA	NA	81799334	81756684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791632_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022476.9_81800284_81810123_1	chr15	-	1170	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	318	1054	0	318	multi-exon	FALSE	canonical	3	251	junction_5	12.0432553738597	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCTCCCCTTTTCATTA	746	False	NA	-2	True	AATAAA	-17	NA	81810123	81800283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
ENSMUSG00000022476.9_81800284_81810441_1	chr15	-	1488	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	0	1054	0	318	multi-exon	FALSE	canonical	3	251	junction_5	12.0432553738597	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCTCCCCTTTTCATTA	428	False	NA	-2	True	AATAAA	-17	NA	81810441	81800283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
ENSMUSG00000022477.14_81756685_81799334_1	chr15	+	2737	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	478.18663380254	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGCCTGAGTGATTGA	NA	False	NA	19	True	AAAAAG	-16	NA	81756684	81799334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794048_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022477.14_81756685_81799334_2	chr15	+	2743	18	FSM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	175	0	0	0	multi-exon	FALSE	canonical	3	1727	junction_10	137.479737418618	4217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGCCTGAGTGATTGA	NA	False	NA	19	True	AAAAAG	-16	NA	81756684	81799334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022483.18_97873483_97875265_1	chr15	-	1031	3	ISM	ENSMUSG00000022483.18	ENSMUST00000088355.12	4862	53	27273	0	11537	0	3prime_fragment	FALSE	canonical	3	15	junction_2	1	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGACTTGTGTTTTGT	9670	False	NA	NA	False	ATTAAA	-31	NA	97875265	97873482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_97874068_97874522_97874766_97875062
ENSMUSG00000022484.8_102840414_102880328_1	chr15	+	1285	2	NNC	ENSMUSG00000022484.8	novel	1909	2	NA	NA	-34817	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	0	78	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGGATGGGTTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	102840413	102880328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_102840603_102879232
ENSMUSG00000022500.16_10777351_10810943_1	chr16	-	1981	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	42	212	-8	-212	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTGTGTTGTGTTTCCA	NA	False	NA	21	True	AAGAAA	-1	NA	10810943	10777350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
ENSMUSG00000022500.16_10778233_10810943_1	chr16	-	1099	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	42	1094	-8	455	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGGCCTGTGAAGGGT	NA	False	NA	-4	True	AATAAA	-25	NA	10810943	10778232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
ENSMUSG00000022500.16_10791470_10810943_1	chr16	-	386	3	NNC	ENSMUSG00000022500.16	novel	2235	4	NA	NA	-8	-7275	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	2	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTCAAGGAATTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	10810943	10791469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_10791638_10793290_10793475_10810909
ENSMUSG00000022505.10_10101713_10131832_1	chr16	-	1340	5	FSM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	0	2100	0	-2100	multi-exon	FALSE	canonical	3	117	junction_1	14.2894191624432	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTTTGTCTGTAAGA	NA	False	NA	NA	False	ATTAAA	-33	NA	10131832	10101712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_10102480_10103318_10103466_10105918_10106025_10110125_10110289_10131675
ENSMUSG00000022514.15_26400503_26520704_1	chr16	+	1904	8	FSM	ENSMUSG00000022514.15	ENSMUST00000174202.8	2306	8	0	402	0	-402	multi-exon	FALSE	canonical	3	10	junction_5	3.88087934491604	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTGTGAGCTGTTGC	NA	False	NA	NA	False	AATAAA	-16	NA	26400502	26520704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_26400637_26442904_26442970_26495458_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837
ENSMUSG00000022516.11_4756976_4758883_1	chr16	+	1261	3	NNC	ENSMUSG00000022516.11	novel	1618	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	60	junction_1	233.5	1395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGCTTCTGAGTGCCA	95	False	NA	12	True	AATAAA	-18	NA	4756975	4758883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_4757158_4757247_4757503_4758059
ENSMUSG00000022516.11_4756976_4758883_2	chr16	+	1267	3	FSM	ENSMUSG00000022516.11	ENSMUST00000230931.2	1618	3	351	0	0	0	multi-exon	FALSE	canonical	3	527	junction_2	18	1716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGCTTCTGAGTGCCA	95	False	NA	12	True	AATAAA	-18	NA	4756975	4758883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_4757158_4757241_4757503_4758059
ENSMUSG00000022516.11_4756976_4758883_3	chr16	+	1824	2	FSM	ENSMUSG00000022516.11	ENSMUST00000230224.2	660	2	-16	-1148	0	0	multi-exon	FALSE	canonical	3	563	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGCTTCTGAGTGCCA	95	False	NA	12	True	AATAAA	-18	NA	4756975	4758883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_4757158_4757241
ENSMUSG00000022517.18_4704116_4755086_1	chr16	+	2019	16	FSM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	3	1073	0	66	multi-exon	FALSE	canonical	3	266	junction_15	54.4223810169636	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGATGAAGGACAACAACT	2927	False	NA	4	True	AATATA	-14	NA	4704115	4755086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ENSMUSG00000022517.18_4704116_4756160_1	chr16	+	3159	17	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	118.010592744889	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2927	False	NA	14	True	AATAAA	-15	NA	4704115	4756160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ENSMUSG00000022529.12_3562096_3568654_1	chr16	+	3111	6	FSM	ENSMUSG00000022529.12	ENSMUST00000023176.5	3241	6	139	-9	0	0	multi-exon	FALSE	canonical	3	89	junction_1	57.158026557956	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAATCTTTATTGG	NA	False	NA	12	True	AATAAA	-21	NA	3562095	3568654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_3562632_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566575
ENSMUSG00000022538.21_30380189_30406381_1	chr16	-	2270	14	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	136.800506937017	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATATTCTTATTGTC	NA	False	NA	-8	True	ATTAAA	-14	NA	30406381	30380188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386658_30387931_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ENSMUSG00000022538.21_30380189_30406381_2	chr16	-	2279	14	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	136.800506937017	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATATTCTTATTGTC	NA	False	NA	-8	True	ATTAAA	-14	NA	30406381	30380188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386658_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ENSMUSG00000022538.21_30396717_30406381_1	chr16	-	647	6	ISM	ENSMUSG00000022538.21	ENSMUST00000144666.8	2724	11	29	9886	0	4354	5prime_fragment	FALSE	canonical	3	26	junction_1	195.314105993397	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGCCTTAATGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	30406381	30396716	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_30396816_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ENSMUSG00000022540.17_4826594_4831400_1	chr16	-	1368	11	NNC	ENSMUSG00000022540.17	novel	1355	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	153.734966744719	1255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831400	4826593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828801_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
ENSMUSG00000022540.17_4826594_4831400_2	chr16	-	1369	11	NNC	ENSMUSG00000022540.17	novel	1355	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	152.153376564571	904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831400	4826593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829557_4830104_4830155_4830290_4830374_4831166_4831239_4831326
ENSMUSG00000022544.15_5062743_5073820_1	chr16	-	1416	8	FSM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	27	727	0	0	multi-exon	FALSE	canonical	3	270	junction_1	73.3462573645565	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGACTGTCCTGTCAGAC	NA	False	NA	-5	True	AATAAA	-17	NA	5073820	5062742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ENSMUSG00000022544.15_5062743_5073820_2	chr16	-	1497	7	NIC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	270	junction_1	79.2199820471802	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGACTGTCCTGTCAGAC	NA	False	NA	-5	True	AATAAA	-17	NA	5073820	5062742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_5063250_5065316_5065464_5066428_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ENSMUSG00000022544.15_5065239_5073820_1	chr16	-	853	6	NIC	ENSMUSG00000022544.15	novel	987	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	181.055129725727	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTTCTCTTTCTGTGG	NA	False	NA	-2	True	NA	NA	NA	5073820	5065238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_5065464_5066428_5066695_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ENSMUSG00000022545.14_12962081_12966598_1	chr16	+	1395	3	NNC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	11826	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	31.5	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGTTTCTCAGTGTTT	NA	False	NA	11	True	AATAAA	-14	NA	12962080	12966598	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_12962154_12962264_12962378_12965389
ENSMUSG00000022548.15_31115940_31133414_1	chr16	-	862	5	FSM	ENSMUSG00000022548.15	ENSMUST00000115230.2	1070	5	208	0	-2	0	multi-exon	FALSE	canonical	2	5	junction_4	68.1725751310598	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGTGTTTCCTGTGGA	8708	False	NA	-4	True	AATAAA	-12	NA	31133414	31115939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133369
ENSMUSG00000022548.15_31116238_31133412_1	chr16	-	715	5	FSM	ENSMUSG00000022548.15	ENSMUST00000023207.15	979	5	0	264	0	0	multi-exon	FALSE	canonical	3	104	junction_4	27.2614654778499	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATCCTTACTTCTAATG	8710	False	NA	NA	False	AAGAAA	-37	NA	31133412	31116237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133216
ENSMUSG00000022550.19_76460605_76480016_1	chr15	+	2056	14	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	116	junction_9	17.5296874138817	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTTTGTGTTTTAT	3149	False	NA	NA	False	AAGAAA	-1	NA	76460604	76480016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ENSMUSG00000022550.19_76480011_76491731_1	chr15	+	4453	37	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	847	11715	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCGGTCCGGCCGCGCG	2578	False	NA	NA	False	NA	NA	NA	76480010	76491731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ENSMUSG00000022550.19_76480011_76491731_2	chr15	+	4428	37	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	847	11715	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCGGTCCGGCCGCGCG	2578	False	NA	NA	False	NA	NA	NA	76480010	76491731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_76480108_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ENSMUSG00000022551.9_76227733_76230135_1	chr15	+	1176	7	NNC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_5	1758.26850591395	5376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTAGCTGGTCAATG	NA	False	NA	28	True	AATAAA	-18	NA	76227732	76230135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229685_76229778_76229854
ENSMUSG00000022551.9_76227733_76230135_2	chr15	+	1185	7	FSM	ENSMUSG00000022551.9	ENSMUST00000023210.8	1520	7	10	325	0	3	multi-exon	FALSE	canonical	3	4240	junction_5	258.32822575596	5684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTAGCTGGTCAATG	NA	False	NA	28	True	AATAAA	-18	NA	76227732	76230135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ENSMUSG00000022552.17_76231240_76234882_1	chr15	-	1130	8	NIC	ENSMUSG00000022552.17	novel	1734	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	47.1584389833563	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	8542	False	NA	-3	True	ATTAAA	-16	NA	76234882	76231239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234680
ENSMUSG00000022552.17_76231240_76234882_2	chr15	-	1305	9	FSM	ENSMUSG00000022552.17	ENSMUST00000023211.16	1734	9	429	0	0	0	multi-exon	FALSE	canonical	3	126	junction_7	14.1862609591111	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	8542	False	NA	-3	True	ATTAAA	-16	NA	76234882	76231239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234254_76234430_76234680
ENSMUSG00000022555.13_76386215_76396030_1	chr15	-	1767	17	FSM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	121	0	-4	0	multi-exon	FALSE	canonical	3	155	junction_16	22.0368122411115	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	-5	True	AATAAA	-18	NA	76396030	76386214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ENSMUSG00000022557.12_76337189_76361477_1	chr15	-	2563	15	NIC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	559	junction_10	44.3286082592729	1954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGCTGGCAGCAGAGT	NA	False	NA	-34	True	AATAAA	-20	NA	76361477	76337188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ENSMUSG00000022557.12_76337342_76361477_1	chr15	-	2338	16	FSM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	0	153	0	-153	multi-exon	FALSE	canonical	3	559	junction_11	43.9047453775405	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGATTCAGCCTCCAGC	NA	False	NA	-7	True	AATAGA	-18	NA	76361477	76337341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ENSMUSG00000022560.10_76423032_76425590_1	chr15	+	2071	5	FSM	ENSMUSG00000022560.10	ENSMUST00000023220.10	5289	5	0	3218	0	-740	multi-exon	FALSE	canonical	3	110	junction_4	5.2618912949623	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTGTTAATCCCATGAG	NA	False	NA	5	True	AATAAA	-15	NA	76423031	76425590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76423396_76423582_76423803_76423893_76424780_76424871_76424996_76425113
ENSMUSG00000022561.14_76215544_76219103_1	chr15	+	2067	11	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	0	0	intron_retention	FALSE	non_canonical	3	245	junction_2	20.9035882087263	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATCCTGGCCCGCTGTC	4826	False	NA	20	True	AATAAA	-23	NA	76215543	76219103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUSG00000022561.14_76215544_76219103_2	chr15	+	1990	12	FSM	ENSMUSG00000022561.14	ENSMUST00000023221.13	2107	12	113	4	0	0	multi-exon	FALSE	non_canonical	3	197	junction_6	31.5777932223483	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATCCTGGCCCGCTGTC	4826	False	NA	20	True	AATAAA	-23	NA	76215543	76219103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUSG00000022568.18_75919007_75920486_1	chr15	-	809	5	ISM	ENSMUSG00000022568.18	ENSMUST00000136390.8	3071	22	14082	0	0	0	3prime_fragment	FALSE	canonical	3	414	junction_4	34.6770817687994	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTTTTGTCCTGCC	9300	False	NA	-1	True	AATAAA	-21	NA	75920486	75919006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290
ENSMUSG00000022570.8_75796532_75801609_1	chr15	-	1310	11	NIC	ENSMUSG00000022570.8	novel	1319	11	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	144.428667514452	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGACTCAGAAGCTGGG	8912	False	NA	-29	True	AATAAA	-15	NA	75801609	75796531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798138_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
ENSMUSG00000022574.8_75762805_75766139_1	chr15	-	1707	13	FSM	ENSMUSG00000022574.8	ENSMUST00000023237.8	1898	13	191	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	7.1351049201972	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTGTCGTTAGTTCAC	NA	False	NA	NA	False	CATAAA	-30	NA	75766139	75762804	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75762910_75762997_75763106_75763195_75763351_75763428_75763532_75763632_75763714_75763811_75763897_75764190_75764332_75764405_75764603_75764953_75765070_75765154_75765286_75765401_75765485_75765568_75765697_75765865
ENSMUSG00000022575.6_75734188_75739257_1	chr15	+	1521	6	NNC	ENSMUSG00000022575.6	novel	1792	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.4974283824795	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTTGAGGGGTACTG	NA	False	NA	15	True	AATAAA	-20	NA	75734187	75739257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_75734331_75735253_75735825_75738144_75738321_75738394_75738540_75738638_75738713_75738845
ENSMUSG00000022583.13_75140270_75144085_1	chr15	+	914	4	NNC	ENSMUSG00000022583.13	novel	877	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.89897948556636	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGATCTCAGTTTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	75140269	75144085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_75140365_75140550_75140649_75141628_75141746_75143481
ENSMUSG00000022604.19_55725314_55755196_1	chr16	-	2826	11	FSM	ENSMUSG00000022604.19	ENSMUST00000023270.14	7911	11	22	5063	0	0	multi-exon	TRUE	canonical	3	23	junction_5	7.29383301152419	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATTACACCAATAATGT	NA	False	NA	NA	False	ATTAAA	-23	NA	55755196	55725313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55755115
ENSMUSG00000022607.19_73077184_73082694_1	chr15	-	1111	3	ISM	ENSMUSG00000022607.19	ENSMUST00000226988.3	4675	34	212283	233	-1354	-233	3prime_fragment	FALSE	canonical	3	199	junction_2	14.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACTGGAGCTAACTG	NA	False	NA	-12	True	ATTAAA	-16	NA	73082694	73077183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_73078110_73081176_73081258_73082590
ENSMUSG00000022614.9_89235342_89239836_1	chr15	-	2745	14	FSM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	26	135	0	0	multi-exon	FALSE	canonical	0	0	junction_12	66.7675469479281	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTAGTGGTTTTTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	89239836	89235341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
ENSMUSG00000022617.16_89310563_89313633_1	chr15	-	1279	11	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	112.30422966211	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGACTTAAGTGACATTC	1649	False	NA	NA	False	AATAAA	-30	NA	89313633	89310562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312782_89312916_89313031_89313251_89313361_89313579
ENSMUSG00000022617.16_89310563_89313633_2	chr15	-	1386	10	NIC	ENSMUSG00000022617.16	novel	1416	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	62	junction_3	105.224627451097	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGACTTAAGTGACATTC	1649	False	NA	NA	False	AATAAA	-30	NA	89313633	89310562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
ENSMUSG00000022620.15_89356679_89360359_1	chr15	-	2717	8	ISM	ENSMUSG00000022620.15	ENSMUST00000165199.8	3492	9	1269	0	-43	0	3prime_fragment	FALSE	canonical	3	62	junction_5	9.89743318610787	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTTTAGAAGCATCTAT	NA	False	NA	NA	False	NA	NA	NA	89360359	89356678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_89357761_89357871_89357975_89358209_89358338_89358430_89358556_89358742_89358913_89358989_89359209_89359324_89359566_89359710
ENSMUSG00000022634.10_93182728_93234689_1	chr15	-	1107	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	0	569	0	-566	multi-exon	FALSE	canonical	3	129	junction_3	11.0453610171873	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATGTTTTTTGACATGT	NA	False	NA	-3	True	AATAAA	-19	NA	93234689	93182727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
ENSMUSG00000022635.10_93283994_93296188_1	chr15	-	731	7	NIC	ENSMUSG00000022635.10	novel	877	8	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_4	235.838515844116	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTTGTGGAATAGT	NA	False	NA	-14	True	AATAAA	-14	NA	93296188	93283993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93293467_93293497_93295050_93295137_93296043
ENSMUSG00000022637.12_51851969_52024829_1	chr16	+	2685	18	FSM	ENSMUSG00000022637.12	ENSMUST00000114471.3	6648	18	381	3582	0	-918	multi-exon	TRUE	canonical	3	25	junction_15	12.7088776425873	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACCCCGAAGGACTGCAC	NA	False	NA	NA	False	NA	NA	NA	51851968	52024829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ENSMUSG00000022652.8_48251600_48451891_1	chr16	+	3380	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	0	628	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	351.484057816864	2895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATGTATAATGTGCCT	NA	False	NA	17	True	ATTAAA	-21	NA	48251599	48451891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ENSMUSG00000022652.8_48432064_48451274_1	chr16	+	992	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17034	11	at_least_one_novel_splicesite	FALSE	canonical	3	485	junction_1	244.404064898224	2718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTTTTGATTGCTAT	729	False	NA	22	True	AATAAA	-27	NA	48432063	48451274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ENSMUSG00000022652.8_48432064_48451891_1	chr16	+	1308	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17034	628	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	472.316746871207	1936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATGTATAATGTGCCT	729	False	NA	17	True	ATTAAA	-21	NA	48432063	48451891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_48432112_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ENSMUSG00000022652.8_48432165_48451274_1	chr16	+	891	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17135	11	at_least_one_novel_splicesite	FALSE	canonical	3	485	junction_1	244.404064898224	2033	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTTTTGATTGCTAT	830	False	NA	22	True	AATAAA	-27	NA	48432164	48451274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ENSMUSG00000022652.8_48432165_48451274_2	chr16	+	1046	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17135	11	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	410.646429177119	1279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTTTTGATTGCTAT	830	False	NA	22	True	AATAAA	-27	NA	48432164	48451274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_48432377_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ENSMUSG00000022658.11_45531593_45544760_1	chr16	-	1029	4	FSM	ENSMUSG00000022658.11	ENSMUST00000096057.5	1240	4	211	0	211	0	multi-exon	FALSE	canonical	3	70	junction_1	1.63299316185545	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAGTATAACTTTATT	NA	False	NA	-9	True	AATAAA	-15	NA	45544760	45531592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_45532073_45533294_45533398_45543285_45543461_45544489
ENSMUSG00000022663.4_44979338_45008257_1	chr16	+	1223	12	FSM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	190	644	190	0	multi-exon	FALSE	canonical	3	353	junction_3	33.1011472673263	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTATTTGTTTAATAAAA	NA	False	NA	-13	True	AATAAA	-17	NA	44979337	45008257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
ENSMUSG00000022664.12_44961174_44979023_1	chr16	-	1732	3	NNC	ENSMUSG00000022664.12	novel	865	4	NA	NA	-5	1135	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	27	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTGTACTATGTC	NA	False	NA	-11	True	ATTAAA	-19	NA	44979023	44961173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_44962576_44963983_44964245_44978954
ENSMUSG00000022668.11_44544664_44557468_1	chr16	-	2687	9	NIC	ENSMUSG00000022668.11	novel	3415	6	NA	NA	9178	12467	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGAGAGGGAGGGAGGGA	1990	False	NA	NA	False	NA	NA	NA	44557468	44544663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_44544832_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ENSMUSG00000022668.11_44559242_44566726_1	chr16	-	1304	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	0	2111	0	263	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCTTCTTCTAGTATTT	NA	False	NA	NA	False	AATAGA	-22	NA	44566726	44559241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ENSMUSG00000022668.11_44559505_44566726_1	chr16	-	1041	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	0	2374	0	0	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTAAGGGTTACAAATAAT	NA	False	NA	-72	True	NA	NA	NA	44566726	44559504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ENSMUSG00000022671.14_15666307_15680804_1	chr16	-	626	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	407	2	-218	0	multi-exon	FALSE	canonical	3	566	junction_1	21	2858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	-4	True	ATTAAA	-20	NA	15680804	15666306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_15666594_15680261_15680408_15680611
ENSMUSG00000022673.6_15441974_15455157_1	chr16	-	3269	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	107	213	107	0	multi-exon	FALSE	canonical	3	1276	junction_6	130.715909088714	2478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAATACTTGGTTTAAA	NA	False	NA	-8	True	AATAAA	-8	NA	15455157	15441973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ENSMUSG00000022674.16_15371430_15412362_1	chr16	-	3292	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	26	889	-8	-889	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	4218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTCCAGTAGGTCCC	NA	False	NA	-45	True	AATAAA	-16	NA	15412362	15371429	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ENSMUSG00000022674.16_15373369_15412362_1	chr16	-	1353	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	26	2828	-8	0	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	3972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGACTATCAAAGACTT	NA	False	NA	NA	False	AAGAAA	-4	NA	15412362	15373368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ENSMUSG00000022674.16_15373538_15412362_1	chr16	-	1058	3	FSM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	9	169	-8	-169	multi-exon	FALSE	canonical	3	117	junction_1	698.5	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGTGCTATTTCTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	15412362	15373537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_15374408_15398922_15399072_15412323
ENSMUSG00000022674.16_15373538_15412362_2	chr16	-	1184	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	26	2997	-8	-169	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	3885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGTGCTATTTCTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	15412362	15373537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ENSMUSG00000022677.16_14117108_14135211_1	chr16	-	1239	4	NIC	ENSMUSG00000022677.16	novel	1465	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	177.216126680264	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTATGGTCATGGTCT	NA	False	NA	-4	True	NA	NA	NA	14135211	14117107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_14118074_14122317_14122452_14128910_14128996_14135157
ENSMUSG00000022677.16_14117108_14135211_2	chr16	-	1107	3	NNC	ENSMUSG00000022677.16	novel	1414	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	214.5	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTATGGTCATGGTCT	NA	False	NA	-4	True	NA	NA	NA	14135211	14117107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_14118074_14122317_14122405_14135157
ENSMUSG00000022677.16_14117108_14135211_3	chr16	-	1218	3	NIC	ENSMUSG00000022677.16	novel	1414	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	152	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTATGGTCATGGTCT	NA	False	NA	-4	True	NA	NA	NA	14135211	14117107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_14118074_14131679_14131878_14135157
ENSMUSG00000022677.16_14117488_14135211_1	chr16	-	774	3	FSM	ENSMUSG00000022677.16	ENSMUST00000230495.2	1147	3	-3	376	0	-182	multi-exon	FALSE	canonical	3	67	junction_2	185.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAGTTTGATTTTTTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	14135211	14117487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_14118074_14122317_14122452_14135157
ENSMUSG00000022677.16_14117488_14135211_2	chr16	-	1057	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	28	380	0	-182	multi-exon	FALSE	canonical	3	293	junction_3	56.7384349449295	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAGTTTGATTTTTTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	14135211	14117487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
ENSMUSG00000022677.16_14117757_14135211_1	chr16	-	505	3	FSM	ENSMUSG00000022677.16	ENSMUST00000230495.2	1147	3	-3	645	0	-451	multi-exon	FALSE	canonical	3	67	junction_2	185.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTTTTAGTACTTTGTA	NA	False	NA	NA	False	TTTAAA	-24	NA	14135211	14117756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_14118074_14122317_14122452_14135157
ENSMUSG00000022677.16_14117757_14135211_2	chr16	-	788	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	28	649	0	-451	multi-exon	FALSE	canonical	3	293	junction_3	56.7384349449295	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTTTTAGTACTTTGTA	NA	False	NA	NA	False	TTTAAA	-24	NA	14135211	14117756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
ENSMUSG00000022678.17_13981162_14010700_1	chr16	+	2167	9	NNC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_8	96.0311635616272	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGCTCAATAGATGTGC	NA	False	NA	4	True	AATAAA	-17	NA	13981161	14010700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009586
ENSMUSG00000022679.14_13758559_13765609_1	chr16	+	1478	5	FSM	ENSMUSG00000022679.14	ENSMUST00000148966.2	2315	5	0	837	0	449	multi-exon	FALSE	canonical	3	36	junction_1	78.6431815226215	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAGCAAATGAAAATTCT	521	False	NA	NA	False	AATAAA	-21	NA	13758558	13765609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13758888_13759983_13760038_13762529_13762601_13764421_13764452_13764615
ENSMUSG00000022679.14_13758559_13765609_3	chr16	+	1424	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	30	1633	0	449	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAGCAAATGAAAATTCT	521	False	NA	NA	False	AATAAA	-21	NA	13758558	13765609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
ENSMUSG00000022679.14_13758559_13766449_2	chr16	+	2264	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	30	793	0	3	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGGGTATTGTCATTT	521	False	NA	12	True	NA	NA	NA	13758558	13766449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
ENSMUSG00000022680.15_13637189_13653314_1	chr16	-	931	8	NIC	ENSMUSG00000022680.15	novel	782	3	NA	NA	1631	13823	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCGCCCCGCCCCGCCC	NA	False	NA	NA	False	NA	NA	NA	13653314	13637188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_13637301_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ENSMUSG00000022680.15_13637189_13653314_2	chr16	-	1019	10	NNC	ENSMUSG00000022680.15	novel	782	3	NA	NA	1631	13823	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCGCCCCGCCCCGCCC	NA	False	NA	NA	False	NA	NA	NA	13653314	13637188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_13637301_13644746_13644769_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ENSMUSG00000022680.15_13637189_13653314_4	chr16	-	1092	10	NNC	ENSMUSG00000022680.15	novel	782	3	NA	NA	1631	13823	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCGCCCCGCCCCGCCC	NA	False	NA	NA	False	NA	NA	NA	13653314	13637188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646876_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ENSMUSG00000022680.15_13652024_13720919_1	chr16	-	3144	24	FSM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	72	1012	0	0	multi-exon	FALSE	canonical	3	113	junction_1	25.0911382243075	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGCTTTTGTTGCTGT	9770	False	NA	-17	True	NA	NA	NA	13720919	13652023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ENSMUSG00000022681.16_13637189_13653139_1	chr16	+	925	10	FSM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	74	176	0	109	multi-exon	FALSE	canonical	3	538	junction_1	69.8729004852541	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTGTGGGAAAAGAT	NA	False	NA	NA	False	AATAAA	-25	NA	13637188	13653139	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ENSMUSG00000022681.16_13637189_13653139_2	chr16	+	822	9	FSM	ENSMUSG00000022681.16	ENSMUST00000136618.8	1014	9	19	173	0	109	multi-exon	FALSE	canonical	3	118	junction_1	197.353743313878	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTGTGGGAAAAGAT	NA	False	NA	NA	False	AATAAA	-25	NA	13637188	13653139	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13637301_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ENSMUSG00000022681.16_13637189_13653314_1	chr16	+	1046	9	NIC	ENSMUSG00000022681.16	novel	1175	10	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	44	junction_5	218.732963622313	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTAGATGACTTTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	13637188	13653314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ENSMUSG00000022681.16_13637189_13653314_2	chr16	+	943	8	NIC	ENSMUSG00000022681.16	novel	1014	9	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	44	junction_4	287.768472695587	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTAGATGACTTTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	13637188	13653314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_13637301_13644923_13644990_13645251_13645361_13646868_13646943_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ENSMUSG00000022684.16_13489793_13517189_1	chr16	+	1634	7	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	71	4287	-21	36	5prime_fragment	FALSE	canonical	3	82	junction_1	11.6105794668292	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTACCTTGGCTCCTCAGG	NA	False	NA	NA	False	AATAAA	-15	NA	13489792	13517189	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736
ENSMUSG00000022684.16_13489884_13517189_1	chr16	+	1543	7	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	162	4287	0	36	5prime_fragment	FALSE	canonical	3	82	junction_1	11.6105794668292	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTACCTTGGCTCCTCAGG	NA	False	NA	NA	False	AATAAA	-15	NA	13489883	13517189	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736
ENSMUSG00000022684.16_13489884_13521471_1	chr16	+	2836	8	FSM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	162	5	0	-5	multi-exon	FALSE	canonical	3	82	junction_1	10.7760126660835	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAACCTTTATAGAGAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	13489883	13521471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
ENSMUSG00000022686.15_19579149_19591213_1	chr16	+	4093	4	FSM	ENSMUSG00000022686.15	ENSMUST00000079780.10	4258	4	165	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	15.8954920234218	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAGTAATGTGAATTTAA	NA	False	NA	7	True	AATAAA	-15	NA	19579148	19591213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19587493
ENSMUSG00000022698.18_43960249_43980346_1	chr16	+	1071	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	33	3383	0	-1191	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGAGCCTACTATATTG	NA	False	NA	22	True	AATAAA	-31	NA	43960248	43980346	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ENSMUSG00000022698.18_43960249_43980963_1	chr16	+	1688	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	33	2766	0	-574	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAACAGAATTGCATTACGT	NA	False	NA	22	True	AATAAA	-26	NA	43960248	43980963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ENSMUSG00000022701.19_43710262_43784060_1	chr16	+	3029	16	FSM	ENSMUSG00000022701.19	ENSMUST00000178400.9	3745	16	99	617	0	-617	multi-exon	FALSE	canonical	1	27	junction_10	16.0949957716331	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGCCTGGACTTACG	NA	False	NA	16	True	AATAAA	-16	NA	43710261	43784060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759527_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ENSMUSG00000022704.17_43681770_43710018_1	chr16	-	3046	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	44.3163344603319	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710018	43681769	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701330_43701577_43709929
ENSMUSG00000022704.17_43681770_43710018_2	chr16	-	3021	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	35.9374456521328	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710018	43681769	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701355_43701577_43709929
ENSMUSG00000022706.17_18690768_18695289_1	chr16	-	957	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	323	0	0	0	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	6064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCGTTTATTTTAATC	NA	False	NA	-7	True	AATAAA	-15	NA	18695289	18690767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
ENSMUSG00000022706.17_18690768_18695289_2	chr16	-	757	5	NNC	ENSMUSG00000022706.17	novel	1280	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	768.173157562798	4546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCGTTTATTTTAATC	NA	False	NA	-7	True	AATAAA	-15	NA	18695289	18690767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_18690775_18690974_18691413_18692286_18692446_18694073_18694158_18695220
ENSMUSG00000022706.17_18690976_18695289_1	chr16	-	744	4	NNC	ENSMUSG00000022706.17	novel	778	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_2	797.017077748164	868	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAGTATCTGTCTTTTG	NA	False	NA	-24	True	AATAAA	-7	NA	18695289	18690975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_18691413_18692286_18692441_18694073_18694158_18695220
ENSMUSG00000022706.17_18690976_18695289_2	chr16	-	749	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	323	208	0	0	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	4599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAGTATCTGTCTTTTG	NA	False	NA	-24	True	AATAAA	-7	NA	18695289	18690975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
ENSMUSG00000022710.18_8566586_8601247_1	chr16	-	644	3	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8925	-42762	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	15	2777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCTGAGTATCACTTTT	NA	False	NA	NA	False	NA	NA	NA	8601247	8566585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_8566919_8574679_8574937_8601193
ENSMUSG00000022710.18_8566586_8610236_1	chr16	-	722	3	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-64	-42762	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	23	2865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCTGAGTATCACTTTT	NA	False	NA	NA	False	NA	NA	NA	8610236	8566585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_8566919_8574679_8574932_8610099
ENSMUSG00000022711.17_8455602_8469535_1	chr16	+	810	7	ISM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	64	5860	0	244	5prime_fragment	FALSE	canonical	3	143	junction_5	24.6153745993569	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCTTTATGATTCTGC	NA	False	NA	NA	False	NA	NA	NA	8455601	8469535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273
ENSMUSG00000022711.17_8455602_8473966_1	chr16	+	1216	8	ISM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	64	1429	0	-640	5prime_fragment	FALSE	canonical	3	143	junction_5	23.4259580423957	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTGGGGAATTTAAAGT	NA	False	NA	NA	False	AATATA	-14	NA	8455601	8473966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414
ENSMUSG00000022721.20_18057648_18066596_1	chr16	+	1079	6	NNC	ENSMUSG00000022721.20	novel	2805	11	NA	NA	-8895	-1516	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	12339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGCAGTGATTCAAAACCAG	4735	False	NA	NA	False	NA	NA	NA	18057647	18066596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_18058058_18058757_18058824_18059608_18059738_18063064_18063213_18065148_18065290_18066411
ENSMUSG00000022721.20_18057648_18066596_2	chr16	+	1080	6	NNC	ENSMUSG00000022721.20	novel	2805	11	NA	NA	-8895	-1516	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	14643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGCAGTGATTCAAAACCAG	4735	False	NA	NA	False	NA	NA	NA	18057647	18066596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065285_18066411
ENSMUSG00000022721.20_18057841_18066596_1	chr16	+	897	6	NNC	ENSMUSG00000022721.20	novel	2805	11	NA	NA	-8702	-1516	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGCAGTGATTCAAAACCAG	4928	False	NA	NA	False	NA	NA	NA	18057840	18066596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_18058058_18058752_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ENSMUSG00000022721.20_18057841_18066596_2	chr16	+	886	6	NNC	ENSMUSG00000022721.20	novel	2805	11	NA	NA	-8702	-1516	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGCAGTGATTCAAAACCAG	4928	False	NA	NA	False	NA	NA	NA	18057840	18066596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_18058058_18058757_18058824_18059608_18059738_18063064_18063213_18065148_18065290_18066411
ENSMUSG00000022721.20_18057841_18066596_3	chr16	+	887	6	NNC	ENSMUSG00000022721.20	novel	2805	11	NA	NA	-8702	-1516	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5094	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGCAGTGATTCAAAACCAG	4928	False	NA	NA	False	NA	NA	NA	18057840	18066596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065285_18066411
ENSMUSG00000022721.20_18066866_18068584_1	chr16	+	1065	3	ISM	ENSMUSG00000022721.20	ENSMUST00000059696.12	2082	9	0	2782	0	0	5prime_fragment	FALSE	canonical	3	222	junction_1	39	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTGGGCAAATCTGGGT	388	False	NA	NA	False	AGTAAA	-15	NA	18066865	18068584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_18067116_18067349_18067898_18068317
ENSMUSG00000022722.19_59433691_59459530_1	chr16	-	1317	8	FSM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	0	379	0	0	multi-exon	FALSE	canonical	3	88	junction_5	9.94064014692275	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAACTAGAGTGTTCTG	NA	False	NA	NA	False	AATAAA	-10	NA	59459530	59433690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_59434208_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
ENSMUSG00000022722.19_59433691_59459754_1	chr16	-	1541	8	FSM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	-224	379	0	0	multi-exon	FALSE	canonical	3	88	junction_5	9.94064014692275	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAACTAGAGTGTTCTG	NA	False	NA	NA	False	AATAAA	-10	NA	59459754	59433690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_59434208_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
ENSMUSG00000022723.17_59292138_59312031_1	chr16	-	1812	9	NIC	ENSMUSG00000022723.17	novel	4378	7	NA	NA	33946	19000	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACGCGACCCCGCCCACG	NA	False	NA	NA	False	NA	NA	NA	59312031	59292137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567
ENSMUSG00000022724.16_59292138_59312539_1	chr16	+	1874	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	0	285	0	-115	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTCGTCTTGCTTCTT	NA	False	NA	13	True	CATAAA	-15	NA	59292137	59312539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
ENSMUSG00000022744.13_58548386_58554395_1	chr16	+	1815	5	FSM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	113	219	0	-219	multi-exon	FALSE	canonical	3	351	junction_1	33.101170674162	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGGTGTGTATCAACAT	NA	False	NA	NA	False	NA	NA	NA	58548385	58554395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_58548448_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ENSMUSG00000022749.9_56989379_57051756_1	chr16	-	3425	18	FSM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	111	154	-20	-154	multi-exon	FALSE	canonical	3	134	junction_12	18.4520326427881	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTCATTTCTTCCATT	NA	False	NA	NA	False	NA	NA	NA	57051756	56989378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ENSMUSG00000022750.19_17577482_17596714_1	chr16	+	2955	4	FSM	ENSMUSG00000022750.19	ENSMUST00000144116.2	3266	4	-45	356	0	-356	multi-exon	FALSE	canonical	3	178	junction_1	142.007824510561	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGTGTTTAGCAGGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	17577481	17596714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265
ENSMUSG00000022751.10_56977029_56987716_1	chr16	-	1301	10	NNC	ENSMUSG00000022751.10	novel	1286	10	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	226.228498057458	2710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGATGTTTTTCTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	56987716	56977028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987648
ENSMUSG00000022751.10_56977029_56987716_2	chr16	-	722	8	NNC	ENSMUSG00000022751.10	novel	1286	10	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	249.371618436487	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGATGTTTTTCTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	56987716	56977028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_56977142_56980470_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
ENSMUSG00000022751.10_56977168_56987716_1	chr16	-	1167	10	FSM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	-21	140	-12	0	multi-exon	FALSE	canonical	3	674	junction_8	39.9499687108764	2784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTTTCCATGTGTGGT	NA	False	NA	71	True	ATTAAA	-16	NA	56987716	56977167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
ENSMUSG00000022751.10_56977168_56987716_2	chr16	-	1159	10	NNC	ENSMUSG00000022751.10	novel	1286	10	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	229.627610504863	1076	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTTTCCATGTGTGGT	NA	False	NA	71	True	ATTAAA	-16	NA	56987716	56977167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980501_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
ENSMUSG00000022751.10_56977168_56987716_3	chr16	-	1260	10	NIC	ENSMUSG00000022751.10	novel	1286	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	228.91909185842	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTTTCCATGTGTGGT	NA	False	NA	71	True	ATTAAA	-16	NA	56987716	56977167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_56977530_56977846_56977996_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
ENSMUSG00000022751.10_56977168_56987716_4	chr16	-	1162	10	NNC	ENSMUSG00000022751.10	novel	1286	10	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	226.228498057458	1956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTTTCCATGTGTGGT	NA	False	NA	71	True	ATTAAA	-16	NA	56987716	56977167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987648
ENSMUSG00000022752.10_56942470_56973395_1	chr16	+	1887	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	404	3673	404	-2853	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-15	NA	56942469	56973395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ENSMUSG00000022752.10_56977029_56987716_1	chr16	+	1299	10	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	3406	10648	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCGGGGCCGAGCCGCGC	NA	False	NA	NA	False	NA	NA	NA	56977028	56987716	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_56977530_56977846_56977896_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
ENSMUSG00000022754.7_56626627_56706533_1	chr16	-	1602	6	FSM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	-4	1103	-4	226	multi-exon	FALSE	canonical	1	3	junction_5	1.32664991614216	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCATTTTTTTTTTCTTA	6298	False	NA	NA	False	AATAAA	-34	NA	56706533	56626626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_56627140_56631888_56632035_56642587_56642773_56643750_56643958_56646028_56646222_56706175
ENSMUSG00000022757.20_56510695_56537674_1	chr16	-	1794	8	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	169.645368402465	1146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	False	NA	0	True	AATAAA	-16	NA	56537674	56510694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ENSMUSG00000022757.20_56510695_56537674_2	chr16	-	1806	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	139	0	0	0	multi-exon	FALSE	canonical	3	474	junction_2	54.3950027716757	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	False	NA	0	True	AATAAA	-16	NA	56537674	56510694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ENSMUSG00000022757.20_56510695_56537674_3	chr16	-	1792	8	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	201.454608246308	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	False	NA	0	True	AATAAA	-16	NA	56537674	56510694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533190_56537547
ENSMUSG00000022757.20_56511341_56537674_1	chr16	-	1160	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	139	646	0	-101	multi-exon	FALSE	canonical	3	474	junction_2	54.3950027716757	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTCAGCCTGCCAACTA	NA	False	NA	NA	False	NA	NA	NA	56537674	56511340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ENSMUSG00000022758.15_17390820_17394535_1	chr16	+	2293	5	Genic_Genomic	ENSMUSG00000022758.15	novel	3382	14	NA	NA	11023	-1129	multi-exon	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCTGCCCCACTAGTTTA	NA	False	NA	NA	False	NA	NA	NA	17390819	17394535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_17391317_17391419_17391529_17391809_17392451_17392815_17393830_17394503
ENSMUSG00000022760.18_17345942_17348655_1	chr16	-	1366	3	ISM	ENSMUSG00000022760.18	ENSMUST00000231424.2	895	4	0	-173	0	0	intron_retention	FALSE	canonical	3	101	junction_1	8.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTTTGGCTTGGCTGG	7531	False	NA	1	True	AATAAA	-19	NA	17348655	17345941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_17346605_17346798_17346940_17348093
ENSMUSG00000022760.18_17345942_17348655_2	chr16	-	1074	4	ISM	ENSMUSG00000022760.18	ENSMUST00000232114.2	1120	5	321	-108	0	0	3prime_fragment	FALSE	canonical	2	7	junction_3	48.8148429157453	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTTTGGCTTGGCTGG	7531	False	NA	1	True	AATAAA	-19	NA	17348655	17345941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348541
ENSMUSG00000022760.18_17345942_17348919_1	chr16	-	774	3	NIC	ENSMUSG00000022760.18	novel	1248	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	12	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTTTGGCTTGGCTGG	7267	False	NA	1	True	AATAAA	-19	NA	17348919	17345941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_17346605_17348641_17348722_17348888
ENSMUSG00000022760.18_17345942_17348919_3	chr16	-	1238	4	FSM	ENSMUSG00000022760.18	ENSMUST00000231288.2	734	4	0	-504	0	0	multi-exon	FALSE	canonical	3	86	junction_3	13.0724477007517	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTTTGGCTTGGCTGG	7267	False	NA	1	True	AATAAA	-19	NA	17348919	17345941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641
ENSMUSG00000022761.13_17326837_17343855_1	chr16	+	2767	21	FSM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	285	342	0	2	multi-exon	FALSE	canonical	2	77	junction_5	14.8690113995518	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCTGTCAGGAGCCATT	NA	False	NA	10	True	AATAAA	-23	NA	17326836	17343855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ENSMUSG00000022761.13_17326837_17344197_1	chr16	+	3109	21	FSM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	285	0	0	0	multi-exon	FALSE	canonical	2	77	junction_5	14.8690113995518	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCCGAGTCTTCT	NA	False	NA	32	True	NA	NA	NA	17326836	17344197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ENSMUSG00000022765.11_17223850_17246275_1	chr16	+	1031	5	FSM	ENSMUSG00000022765.11	ENSMUST00000023449.11	3447	5	0	2416	0	-2416	multi-exon	FALSE	canonical	3	88	junction_2	7.59522876548166	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTTGAAATATTAGTTT	1384	False	NA	20	True	AATATA	-18	NA	17223849	17246275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_17224224_17237127_17237325_17240329_17240416_17244900_17245006_17246006
ENSMUSG00000022765.11_17223850_17247193_1	chr16	+	1949	5	FSM	ENSMUSG00000022765.11	ENSMUST00000023449.11	3447	5	0	1498	0	-1498	multi-exon	FALSE	canonical	3	88	junction_2	7.59522876548166	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACCTGACTATCTTAAA	1384	False	NA	NA	False	AATAAA	-16	NA	17223849	17247193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_17224224_17237127_17237325_17240329_17240416_17244900_17245006_17246006
ENSMUSG00000022768.18_16964795_16966710_1	chr16	-	1526	4	NIC	ENSMUSG00000022768.18	novel	4210	4	NA	NA	-1617	-4210	intron_retention	TRUE	non_canonical	0	0	junction_1	0	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCCCTCGAACGCTGCCG	NA	False	NA	NA	False	NA	NA	NA	16966710	16964794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_16965011_16965096_16965257_16965461_16965562_16965660
ENSMUSG00000022771.18_16904539_16929100_1	chr16	-	2192	21	FSM	ENSMUSG00000022771.18	ENSMUST00000023455.14	2333	21	21	120	0	-119	multi-exon	FALSE	canonical	3	214	junction_1	124.441592725262	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	16929100	16904538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ENSMUSG00000022771.18_16906515_16929100_1	chr16	-	1747	20	FSM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	6	1335	0	0	multi-exon	FALSE	canonical	3	631	junction_7	49.1072657119735	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGGGTCCAGTTTGAGC	NA	False	NA	-35	True	AATAAA	-13	NA	16929100	16906514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ENSMUSG00000022771.18_16906515_16929100_2	chr16	-	1697	19	NIC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_18	172.831083238326	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGGGTCCAGTTTGAGC	NA	False	NA	-35	True	AATAAA	-13	NA	16929100	16906514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16929006
ENSMUSG00000022774.14_31767424_31775976_1	chr16	+	663	4	FSM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	93	1314	0	10	multi-exon	FALSE	canonical	3	415	junction_1	12.2565175405668	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTTTAACTCTAGTCTTA	NA	False	NA	17	True	ATTAAA	-18	NA	31767423	31775976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_31767546_31772942_31773125_31775108_31775248_31775756
ENSMUSG00000022774.14_31767424_31777003_1	chr16	+	1690	4	FSM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	93	287	0	-287	multi-exon	FALSE	canonical	3	415	junction_1	12.2565175405668	2671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGGAGTCTCGCTAGTT	NA	False	NA	NA	False	AATAAA	-22	NA	31767423	31777003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_31767546_31772942_31773125_31775108_31775248_31775756
ENSMUSG00000022779.17_16688631_16710854_1	chr16	+	2861	18	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	287	junction_1	39.4304608859032	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688630	16710854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ENSMUSG00000022781.9_31836686_31897986_1	chr16	-	3989	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	174	1578	174	-1578	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTGTATGAATTGAGA	NA	False	NA	-3	True	ATTAAA	-21	NA	31897986	31836685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ENSMUSG00000022787.11_32066071_32070978_1	chr16	+	611	2	ISM	ENSMUSG00000022787.11	ENSMUST00000023474.4	1394	3	0	4923	0	0	5prime_fragment	FALSE	canonical	3	19	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTTCGGCTGATGAC	NA	False	NA	NA	False	ATTAAA	-15	NA	32066070	32070978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_32066344_32070640
ENSMUSG00000022789.16_16130102_16176802_1	chr16	-	4033	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	417	junction_5	244.836267297011	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176802	16130101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUSG00000022789.16_16130102_16176802_2	chr16	-	3955	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	332	junction_5	248.085384544699	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176802	16130101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUSG00000022789.16_16131247_16176829_1	chr16	-	2915	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	417	junction_5	244.836267297011	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176829	16131246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUSG00000022789.16_16131247_16176829_2	chr16	-	2837	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	332	junction_5	248.085384544699	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176829	16131246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUSG00000022789.16_16131247_16176829_3	chr16	-	2804	18	FSM	ENSMUSG00000022789.16	ENSMUST00000023477.15	3951	18	-6	1153	-6	0	multi-exon	FALSE	canonical	3	164	junction_4	261.707977990631	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176829	16131246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUSG00000022789.16_16131698_16176802_1	chr16	-	2437	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	0	153	combination_of_known_junctions	FALSE	canonical	3	417	junction_5	244.836267297011	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATGTTTAATTCACATT	NA	False	NA	-15	True	AAAACA	-3	NA	16176802	16131697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUSG00000022789.16_16131698_16176829_2	chr16	-	2386	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-6	153	combination_of_known_junctions	FALSE	canonical	3	332	junction_5	248.085384544699	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATGTTTAATTCACATT	NA	False	NA	-15	True	AAAACA	-3	NA	16176829	16131697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUSG00000022792.17_16121304_16127496_1	chr16	+	1069	5	FSM	ENSMUSG00000022792.17	ENSMUST00000159683.2	1528	5	459	0	-113	0	multi-exon	FALSE	canonical	3	45	junction_2	137.095769446034	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCTTTACACAAGAACAA	9981	False	NA	16	True	AATAAA	-21	NA	16121303	16127496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_16121612_16122399_16122568_16124361_16124483_16125073_16125245_16127195
ENSMUSG00000022793.18_38562626_38589211_1	chr16	+	2104	7	FSM	ENSMUSG00000022793.18	ENSMUST00000023482.13	2304	7	0	200	0	1	multi-exon	TRUE	canonical	3	15	junction_1	6.0184900284226	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTGGTCTTGTTTTTTT	3912	False	NA	8	True	AGTAAA	-18	NA	38562625	38589211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_38562731_38572363_38572762_38574280_38574514_38578040_38578229_38583430_38583554_38586276_38586382_38588259
ENSMUSG00000022797.17_32427801_32449198_1	chr16	+	2413	19	FSM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	63	2414	0	-2410	multi-exon	FALSE	canonical	3	399	junction_9	25.3592094942417	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGTTGGTTGTGCTA	8020	False	NA	24	True	ATTAAA	-25	NA	32427800	32449198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ENSMUSG00000022800.15_32698183_32728405_2	chr16	+	3440	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	32	840	0	-840	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	1647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCTGAGCTATAAAGA	NA	False	NA	-2	True	AATAAA	-21	NA	32698182	32728405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ENSMUSG00000022800.15_32698183_32728405_3	chr16	+	526	3	NNC	ENSMUSG00000022800.15	novel	634	4	NA	NA	0	-840	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	344.5	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCTGAGCTATAAAGA	NA	False	NA	-2	True	AATAAA	-21	NA	32698182	32728405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_32698367_32704493_32704555_32728124
ENSMUSG00000022805.18_38118116_38138996_1	chr16	-	1496	8	NNC	ENSMUSG00000022805.18	novel	3048	17	NA	NA	23178	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_6	14.2571142284282	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACGTTGTTTGTAAAGCT	NA	False	NA	-3	True	AATAAA	-16	NA	38138996	38118115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_38118658_38122329_38122422_38122978_38123128_38125140_38125363_38127077_38127225_38128443_38128516_38131353_38131471_38138841
ENSMUSG00000022808.6_33071814_33119032_1	chr16	+	1554	14	FSM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	0	1607	0	-903	multi-exon	FALSE	canonical	3	473	junction_8	41.4737387501677	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGGACTGGTGCTGA	9283	False	NA	4	True	AATAAA	-15	NA	33071813	33119032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ENSMUSG00000022808.6_33071814_33119935_1	chr16	+	2457	14	FSM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	0	704	0	0	multi-exon	FALSE	canonical	3	473	junction_8	41.4737387501677	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTATTATTTTAAGAT	9283	False	NA	26	True	AATAAA	-26	NA	33071813	33119935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ENSMUSG00000022808.6_33071814_33120077_1	chr16	+	2599	14	FSM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	0	562	0	142	multi-exon	FALSE	canonical	3	473	junction_8	41.4737387501677	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTATGGTTTTGCTC	9283	False	NA	10	True	ACTAAA	-20	NA	33071813	33120077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ENSMUSG00000022814.7_33775626_33787373_1	chr16	-	2975	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	35	474	0	-462	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	2848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGGCCAAATCAGTTCA	8675	False	NA	NA	False	ATTAAA	-14	NA	33787373	33775625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ENSMUSG00000022814.7_33776967_33787373_1	chr16	-	1480	5	FSM	ENSMUSG00000022814.7	ENSMUST00000131990.2	3283	5	0	1803	0	-1803	multi-exon	FALSE	canonical	3	47	junction_4	482.354123025812	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGACTGGTATTTGTT	8675	False	NA	NA	False	NA	NA	NA	33787373	33776966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33787195
ENSMUSG00000022814.7_33776967_33787373_2	chr16	-	1634	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	35	1815	0	-1803	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	2660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGACTGGTATTTGTT	8675	False	NA	NA	False	NA	NA	NA	33787373	33776966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ENSMUSG00000022820.5_37467963_37474731_2	chr16	-	444	3	NNC	ENSMUSG00000022820.5	novel	971	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3031	20804	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTCTTTTTCTTGGAT	NA	False	NA	-2	True	AATAAA	-23	NA	37474731	37467962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_37468082_37469375_37469523_37474553
ENSMUSG00000022820.5_37467963_37474731_3	chr16	-	442	3	NNC	ENSMUSG00000022820.5	novel	971	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3379	13801	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTCTTTTTCTTGGAT	NA	False	NA	-2	True	AATAAA	-23	NA	37474731	37467962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_37468068_37469375_37469523_37474541
ENSMUSG00000022820.5_37467963_37474731_4	chr16	-	350	4	NNC	ENSMUSG00000022820.5	novel	971	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3035.03293044555	3203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTCTTTTTCTTGGAT	NA	False	NA	-2	True	AATAAA	-23	NA	37474731	37467962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_37468082_37469375_37469523_37474541_37474609_37474714
ENSMUSG00000022822.17_20150056_20181005_1	chr16	-	2182	7	ISM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	64139	3	1751	0	3prime_fragment	FALSE	canonical	3	439	junction_6	35.3949933684915	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCTTGTTGTATAAAA	NA	False	NA	-6	True	AATAAA	-17	NA	20181005	20150055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931
ENSMUSG00000022822.17_20150960_20181005_1	chr16	-	1278	7	ISM	ENSMUSG00000022822.17	ENSMUST00000115547.9	5372	31	64080	904	1751	259	internal_fragment	FALSE	canonical	3	439	junction_6	35.3949933684915	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATCGTTTTTGTACAG	NA	False	NA	NA	False	ATTAAA	-33	NA	20181005	20150959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931
ENSMUSG00000022822.17_20217567_20245074_1	chr16	-	1272	8	ISM	ENSMUSG00000022822.17	ENSMUST00000115547.9	5372	31	11	67511	0	0	5prime_fragment	FALSE	canonical	3	160	junction_3	84.1085304708101	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTGAGTTTAAAGACTT	NA	False	NA	NA	False	ATTAAA	-37	NA	20245074	20217566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ENSMUSG00000022822.17_20219511_20245074_1	chr16	-	1069	7	NNC	ENSMUSG00000022822.17	novel	1136	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_2	90.516419627724	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTATTTACTGCTG	NA	False	NA	-9	True	AATAAA	-17	NA	20245074	20219510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_20219785_20221009_20221085_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ENSMUSG00000022822.17_20221841_20245074_1	chr16	-	2195	5	FSM	ENSMUSG00000022822.17	ENSMUST00000134962.2	4526	5	0	2331	0	-2330	multi-exon	FALSE	canonical	3	182	junction_2	11.3578166916005	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTCTTTTGACTGGAAA	NA	False	NA	NA	False	TATAAA	-37	NA	20245074	20221840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ENSMUSG00000022827.15_37360267_37391903_1	chr16	+	1167	8	FSM	ENSMUSG00000022827.15	ENSMUST00000023524.13	2031	8	20	844	0	-841	multi-exon	FALSE	canonical	3	98	junction_4	11.0896163971859	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCTGCCATTTTAAAAGA	NA	False	NA	NA	False	NA	NA	NA	37360266	37391903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_37360323_37362208_37362301_37377182_37377313_37380356_37380472_37383977_37384129_37387681_37387754_37390749_37390789_37391391
ENSMUSG00000022833.8_34511080_34544937_1	chr16	+	3386	13	FSM	ENSMUSG00000022833.8	ENSMUST00000231609.2	3999	13	-22	635	0	0	multi-exon	FALSE	canonical	3	110	junction_6	18.9487613198213	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGTTTTACCTTAGTA	NA	False	NA	NA	False	AATAAA	-27	NA	34511079	34544937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ENSMUSG00000022837.15_36648769_36679934_1	chr16	+	1605	13	NIC	ENSMUSG00000022837.15	novel	2797	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	67.3747294366862	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAAGTCTGAAAGCATG	NA	False	NA	15	True	NA	NA	NA	36648768	36679934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
ENSMUSG00000022837.15_36648769_36679934_2	chr16	+	1658	13	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	130	junction_12	42.1751473685102	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAAGTCTGAAAGCATG	NA	False	NA	15	True	NA	NA	NA	36648768	36679934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
ENSMUSG00000022837.15_36648769_36679934_3	chr16	+	1610	13	NNC	ENSMUSG00000022837.15	novel	2797	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	90.8270640038285	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAAGTCTGAAAGCATG	NA	False	NA	15	True	NA	NA	NA	36648768	36679934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_36648802_36649365_36649436_36651858_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
ENSMUSG00000022837.15_36648769_36693083_1	chr16	+	2213	15	NIC	ENSMUSG00000022837.15	novel	2797	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	69.4050518657669	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGTTATTTCAATGTT	NA	False	NA	52	True	AATAAA	-19	NA	36648768	36693083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
ENSMUSG00000022841.16_20354269_20362657_1	chr16	+	1897	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	0	-149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	839.977833040849	5284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGGCTAAATGTTAAT	1394	False	NA	NA	False	AATAAA	-13	NA	20354268	20362657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ENSMUSG00000022841.16_20354269_20362657_2	chr16	+	1879	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	0	-149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1078.29929054971	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGGCTAAATGTTAAT	1394	False	NA	NA	False	AATAAA	-13	NA	20354268	20362657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359850_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ENSMUSG00000022841.16_20354269_20362657_3	chr16	+	1896	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	0	-149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1078.29929054971	4690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGGCTAAATGTTAAT	1394	False	NA	NA	False	AATAAA	-13	NA	20354268	20362657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359867_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ENSMUSG00000022841.16_20354269_20362806_1	chr16	+	2046	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	839.977833040849	5501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTGGGTCTTG	1394	False	NA	17	True	NA	NA	NA	20354268	20362806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ENSMUSG00000022844.9_35217682_35311259_1	chr16	-	1734	17	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_16	132.890697567587	743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGTAGAGTATGTTT	NA	False	NA	-10	True	AATAAA	-14	NA	35311259	35217681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311189
ENSMUSG00000022849.6_35590745_35645918_1	chr16	+	1772	9	NNC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_4	249.638457323787	2286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCCAGCCACTTCCAAAT	5404	False	NA	107	True	NA	NA	NA	35590744	35645918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634414_35634699_35634780_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ENSMUSG00000022849.6_35590745_35646801_1	chr16	+	2586	8	FSM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	0	-883	0	883	multi-exon	FALSE	canonical	3	531	junction_3	35.6118531058502	2374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGAGTTTGTACATGT	5404	False	NA	5	True	AATAAA	-14	NA	35590744	35646801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ENSMUSG00000022855.10_21828311_21866631_1	chr16	+	3034	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	77	1388	0	0	multi-exon	FALSE	canonical	3	339	junction_11	50.6099900587819	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGATAATTTTTCCTC	2279	False	NA	22	True	AATAAA	-22	NA	21828310	21866631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUSG00000022858.17_22035349_22066979_1	chr16	-	177	2	Genic_Genomic	ENSMUSG00000022858.17	novel	4112	1	NA	NA	3624	27950	multi-exon	TRUE	non_canonical	0	0	junction_1	0	30328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCGGTCAATTTCTATAGG	9136	False	NA	NA	False	NA	NA	NA	22066979	22035348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_-_22035407_22066860
ENSMUSG00000022858.17_22035349_22066979_2	chr16	-	176	2	Genic_Genomic	ENSMUSG00000022858.17	novel	4112	1	NA	NA	3624	27950	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCGGTCAATTTCTATAGG	9136	False	NA	NA	False	NA	NA	NA	22066979	22035348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_-_22035400_22066854
ENSMUSG00000022858.17_22064501_22084679_1	chr16	-	2401	10	FSM	ENSMUSG00000022858.17	ENSMUST00000162413.9	1687	10	-3	-711	-3	697	multi-exon	TRUE	canonical	3	442	junction_8	660.884723143114	3538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGCCAAGTAGAACTGGAA	NA	False	NA	-11	True	ATTAAA	-18	NA	22084679	22064500	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
ENSMUSG00000022858.17_22064501_22084679_2	chr16	-	2120	9	NNC	ENSMUSG00000022858.17	novel	3403	9	NA	NA	-3	697	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	700.046148032399	5272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGCCAAGTAGAACTGGAA	NA	False	NA	-11	True	ATTAAA	-18	NA	22084679	22064500	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_22065617_22065939_22066014_22067185_22067241_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
ENSMUSG00000022858.17_22064613_22084679_1	chr16	-	2007	9	NNC	ENSMUSG00000022858.17	novel	3403	9	NA	NA	-3	585	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	703.795069604782	4370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTGTTGGTTTTCTTTTT	NA	False	NA	-20	True	AATAAA	-38	NA	22084679	22064612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067878_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
ENSMUSG00000022858.17_22064613_22084679_2	chr16	-	2008	9	NNC	ENSMUSG00000022858.17	novel	3403	9	NA	NA	-3	585	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	700.046148032399	4570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTGTTGGTTTTCTTTTT	NA	False	NA	-20	True	AATAAA	-38	NA	22084679	22064612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_22065617_22065939_22066014_22067185_22067241_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
ENSMUSG00000022858.17_22064613_22084679_3	chr16	-	2289	10	FSM	ENSMUSG00000022858.17	ENSMUST00000162413.9	1687	10	-3	-599	-3	585	multi-exon	FALSE	canonical	3	442	junction_8	660.884723143114	2489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTGTTGGTTTTCTTTTT	NA	False	NA	-20	True	AATAAA	-38	NA	22084679	22064612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
ENSMUSG00000022858.17_22065212_22084679_1	chr16	-	1811	10	NIC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	119	junction_8	731.055553444622	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCTTTCTAAATATC	NA	False	NA	-20	True	AATAAA	-14	NA	22084679	22065211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077614_22078012_22084490
ENSMUSG00000022858.17_22065212_22084679_2	chr16	-	1409	9	NNC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	700.046148032399	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCTTTCTAAATATC	NA	False	NA	-20	True	AATAAA	-14	NA	22084679	22065211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_22065617_22065939_22066014_22067185_22067241_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
ENSMUSG00000022858.17_22065212_22084679_3	chr16	-	1414	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	76	1913	-3	0	multi-exon	FALSE	canonical	3	1235	junction_5	313.549014310363	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCTTTCTAAATATC	NA	False	NA	-20	True	AATAAA	-14	NA	22084679	22065211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
ENSMUSG00000022864.15_78341849_78373545_1	chr16	-	1236	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114220.9	2644	5	-10	1418	0	0	multi-exon	FALSE	canonical	3	46	junction_4	113.984648089118	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGGTTACTCAATCA	3243	False	NA	-4	True	AATAAA	-13	NA	78373545	78341848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373346
ENSMUSG00000022864.15_78341849_78373545_2	chr16	-	1504	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	0	4623	0	0	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGGTTACTCAATCA	3243	False	NA	-4	True	AATAAA	-13	NA	78373545	78341848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
ENSMUSG00000022868.7_22712985_22718193_1	chr16	+	1283	6	ISM	ENSMUSG00000022868.7	ENSMUST00000232556.2	1336	7	1828	0	-524	0	3prime_fragment	FALSE	canonical	3	93	junction_1	9.66643677887566	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCATGTTCCTTGTCT	NA	False	NA	22	True	NA	NA	NA	22712984	22718193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_22713186_22713544_22713630_22713943_22714108_22715257_22715360_22716877_22716962_22717546
ENSMUSG00000022868.7_22713076_22718193_1	chr16	+	1107	5	ISM	ENSMUSG00000022868.7	ENSMUST00000231932.2	848	6	2281	-543	-433	0	3prime_fragment	FALSE	canonical	3	13	junction_1	40.6540280907071	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCATGTTCCTTGTCT	NA	False	NA	22	True	NA	NA	NA	22713075	22718193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_22713186_22713943_22714108_22715257_22715360_22716877_22716962_22717546
ENSMUSG00000022868.7_22713265_22718177_1	chr16	+	1346	5	ISM	ENSMUSG00000022868.7	ENSMUST00000232556.2	1336	7	2108	16	-244	0	3prime_fragment	FALSE	canonical	3	93	junction_3	9.9373034571759	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCTGAGCCAAAAATGTG	NA	False	NA	6	True	AATAAA	-31	NA	22713264	22718177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_22713630_22713943_22714108_22715257_22715360_22716877_22716962_22717546
ENSMUSG00000022871.14_22737084_22758507_1	chr16	+	1679	9	NNC	ENSMUSG00000022871.14	novel	1572	8	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	224.84435588869	1835	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAACCTGTTGAC	NA	False	NA	14	True	AATAAA	-20	NA	22737083	22758507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_22737345_22739003_22739128_22747824_22748064_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ENSMUSG00000022871.14_22737249_22758507_1	chr16	+	1382	8	FSM	ENSMUSG00000022871.14	ENSMUST00000170805.9	1520	8	117	21	0	0	multi-exon	FALSE	canonical	0	0	junction_2	163.600059877241	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAACCTGTTGAC	NA	False	NA	14	True	AATAAA	-20	NA	22737248	22758507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22737341_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ENSMUSG00000022881.16_22926508_22932697_1	chr16	-	3164	10	NIC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	797	6185	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGCGGACGGCGCCGCCC	NA	False	NA	NA	False	NA	NA	NA	22932697	22926507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ENSMUSG00000022881.16_22926508_22932697_2	chr16	-	1894	11	NIC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	797	6185	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	8086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGCGGACGGCGCCGCCC	NA	False	NA	NA	False	NA	NA	NA	22932697	22926507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ENSMUSG00000022881.16_22926508_22932697_3	chr16	-	2710	11	NIC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	797	6185	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGCGGACGGCGCCGCCC	NA	False	NA	NA	False	NA	NA	NA	22932697	22926507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ENSMUSG00000022881.16_22926508_22932697_4	chr16	-	1757	10	NIC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	797	6185	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	3072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGCGGACGGCGCCGCCC	NA	False	NA	NA	False	NA	NA	NA	22932697	22926507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ENSMUSG00000022881.16_22932701_22946490_1	chr16	-	1217	11	NNC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	486.058803026959	3948	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAGTGAATATACAAT	NA	False	NA	-34	True	AATAAA	-15	NA	22946490	22932700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946286_22946434
ENSMUSG00000022881.16_22932701_22946490_2	chr16	-	1217	11	NNC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	486.513966911537	3999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAGTGAATATACAAT	NA	False	NA	-34	True	AATAAA	-15	NA	22946490	22932700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_22932858_22932936_22933054_22933194_22933266_22933352_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ENSMUSG00000022883.12_72820702_72842983_1	chr16	+	2952	6	NNC	ENSMUSG00000022883.12	novel	6601	29	NA	NA	17393	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	19.2727787306346	97	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTTCCTTGTGTTGAT	NA	False	NA	NA	False	ATTAAA	-17	NA	72820701	72842983	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_72820840_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ENSMUSG00000022884.17_22926508_22932565_1	chr16	+	1869	12	FSM	ENSMUSG00000022884.17	ENSMUST00000123413.8	1965	12	-19	115	0	-115	multi-exon	FALSE	canonical	3	179	junction_11	605.093586095477	5383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAACTGGACCCTGTTG	6053	False	NA	13	True	NA	NA	NA	22926507	22932565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
ENSMUSG00000022884.17_22926508_22932565_2	chr16	+	1736	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-115	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_10	738.769551348727	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAACTGGACCCTGTTG	6053	False	NA	13	True	NA	NA	NA	22926507	22932565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ENSMUSG00000022884.17_22926508_22932697_1	chr16	+	3027	9	ISM	ENSMUSG00000022884.17	ENSMUST00000131871.8	1737	10	-20	0	0	0	intron_retention	FALSE	canonical	3	441	junction_1	660.216063118734	1662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ENSMUSG00000022884.17_22926508_22932697_2	chr16	+	1868	11	NNC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_10	738.769551348727	1993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ENSMUSG00000022884.17_22926508_22932697_3	chr16	+	2573	10	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	690.354516190552	1582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ENSMUSG00000022884.17_22932701_22946490_1	chr16	+	1223	11	NIC	ENSMUSG00000022884.17	novel	2203	10	NA	NA	3252	13604	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	4839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGGGAGCGCGCCACGC	3055	False	NA	NA	False	NA	NA	NA	22932700	22946490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ENSMUSG00000022889.8_84515169_84532122_1	chr16	-	1075	10	NNC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-4	-705	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	319.301320594409	3246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTGTCCCTGCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	84532122	84515168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_84515263_84517153_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
ENSMUSG00000022889.8_84515169_84532122_2	chr16	-	1075	10	NNC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-4	-705	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	318.546699873033	3251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTGTCCCTGCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	84532122	84515168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_84515273_84517157_84517200_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
ENSMUSG00000022890.14_84624759_84631745_1	chr16	-	478	4	ISM	ENSMUSG00000022890.14	ENSMUST00000023608.14	809	5	768	0	-25	0	3prime_fragment	FALSE	canonical	3	5740	junction_3	655.078790850553	20062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631745	84624758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84631696
ENSMUSG00000022890.14_84624759_84631745_2	chr16	-	533	5	ISM	ENSMUSG00000022890.14	ENSMUST00000114191.8	742	6	646	0	-25	0	3prime_fragment	FALSE	canonical	3	198	junction_4	3188.04854103572	3779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631745	84624758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84630707_84630763_84631696
ENSMUSG00000022890.14_84624759_84631745_3	chr16	-	473	4	NNC	ENSMUSG00000022890.14	novel	809	5	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	545	junction_3	2933.80515144866	5596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631745	84624758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_84624884_84625312_84625438_84628216_84628391_84631696
ENSMUSG00000022890.14_84624759_84631745_4	chr16	-	406	4	NNC	ENSMUSG00000022890.14	novel	809	5	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3187.52906740559	3455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631745	84624758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_84624884_84625312_84625438_84628216_84628332_84631704
ENSMUSG00000022890.14_84624759_84631893_1	chr16	-	626	4	ISM	ENSMUSG00000022890.14	ENSMUST00000023608.14	809	5	620	0	0	0	3prime_fragment	FALSE	canonical	3	5740	junction_3	655.078790850553	28026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631893	84624758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84631696
ENSMUSG00000022900.15_36528664_36546063_1	chr16	+	1650	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14324	1103	-7236	-1040	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGTTTGTGGAATTAAT	NA	False	NA	NA	False	AATAGA	-14	NA	36528663	36546063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ENSMUSG00000022900.15_36528664_36546683_1	chr16	+	2270	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14324	483	-7236	-420	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTTCTATTCATTG	NA	False	NA	26	True	AATAAA	-22	NA	36528663	36546683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ENSMUSG00000022900.15_36528664_36547109_1	chr16	+	2696	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14324	57	-7236	0	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTTTGGCAGAGGT	NA	False	NA	12	True	ATTAAA	-24	NA	36528663	36547109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ENSMUSG00000022906.16_35784290_35792975_1	chr16	+	1528	4	ISM	ENSMUSG00000022906.16	ENSMUST00000023622.13	2973	10	24909	0	15636	0	3prime_fragment	FALSE	canonical	3	23	junction_2	8.37987005998436	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGTGAATCGTGAATG	8496	False	NA	13	True	AATAAA	-19	NA	35784289	35792975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_35784735_35788019_35788157_35789960_35790136_35792204
ENSMUSG00000022913.17_95781133_95792112_1	chr16	-	990	7	NNC	ENSMUSG00000022913.17	novel	1044	7	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	463.678678253235	2172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAACTTTATTTTCTTAA	NA	False	NA	-10	True	AATAAA	-16	NA	95792112	95781132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_95781312_95783307_95783439_95784992_95785192_95788492_95788556_95789159_95789312_95790691_95790799_95791953
ENSMUSG00000022913.17_95781237_95792112_1	chr16	-	892	7	FSM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	48	104	-22	0	multi-exon	FALSE	canonical	3	1101	junction_3	73.0062782688357	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGGTGGCCAGGACCTG	NA	False	NA	-114	True	NA	NA	NA	95792112	95781236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_95781312_95783301_95783439_95784992_95785192_95788492_95788556_95789159_95789312_95790691_95790799_95791953
ENSMUSG00000022938.9_97272290_97313730_1	chr16	-	834	8	NNC	ENSMUSG00000022938.9	novel	806	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	13.0384048104053	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATGTCACAGGAGTCT	NA	False	NA	-10	True	AATAAA	-24	NA	97313730	97272289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_97272424_97276447_97276581_97276934_97277023_97277579_97277631_97279548_97279608_97282986_97283111_97302059_97302204_97313629
ENSMUSG00000022945.13_93680819_93702965_1	chr16	+	1854	14	FSM	ENSMUSG00000022945.13	ENSMUST00000023666.11	1922	14	30	38	0	0	multi-exon	FALSE	canonical	3	827	junction_1	52.2487224157954	2083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCCAAATAAACACTCATGAA	4396	False	NA	-17	True	NA	NA	NA	93680818	93702965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ENSMUSG00000022946.11_93597077_93607476_1	chr16	+	1225	8	ISM	ENSMUSG00000022946.11	ENSMUST00000227278.2	1573	10	1355	-2	0	0	3prime_fragment	TRUE	canonical	3	48	junction_2	9.96319758523583	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATTGTCATGTGTATAG	5904	False	NA	20	True	AATAAA	-23	NA	93597076	93607476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ENSMUSG00000022948.17_93380348_93383524_1	chr16	-	721	4	NNC	ENSMUSG00000022948.17	novel	600	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	65.576079649688	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCAGACTGTCTTAG	NA	False	NA	-4	True	AATAAA	-18	NA	93383524	93380347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_93380573_93382066_93382191_93383124_93383235_93383262
ENSMUSG00000022948.17_93380348_93400951_1	chr16	-	1591	11	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	12	junction_10	36.3512035564161	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCAGACTGTCTTAG	NA	False	NA	-4	True	AATAAA	-18	NA	93400951	93380347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400861
ENSMUSG00000022956.12_91722109_91728451_1	chr16	-	701	7	NNC	ENSMUSG00000022956.12	novel	838	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	2316.23864751071	19681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGGCGTGAGGAGCCTT	935	False	NA	-8	True	AATAAA	-13	NA	91728451	91722108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727247_91727293_91728407
ENSMUSG00000022956.12_91722109_91728451_2	chr16	-	515	6	NNC	ENSMUSG00000022956.12	novel	838	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2526.55963713505	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGGCGTGAGGAGCCTT	935	False	NA	-8	True	AATAAA	-13	NA	91728451	91722108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91722175_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727293_91728407
ENSMUSG00000022956.12_91722109_91728451_3	chr16	-	595	6	NNC	ENSMUSG00000022956.12	novel	838	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2526.52373034571	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGGCGTGAGGAGCCTT	935	False	NA	-8	True	AATAAA	-13	NA	91728451	91722108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725870_91728440
ENSMUSG00000022956.12_91722109_91728451_4	chr16	-	695	7	NNC	ENSMUSG00000022956.12	novel	838	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2298.86824812172	17151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGGCGTGAGGAGCCTT	935	False	NA	-8	True	AATAAA	-13	NA	91728451	91722108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723859_91725786_91725898_91727241_91727293_91728407
ENSMUSG00000022956.12_91722109_91728451_5	chr16	-	709	7	NNC	ENSMUSG00000022956.12	novel	838	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2298.86824812172	18228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGGCGTGAGGAGCCTT	935	False	NA	-8	True	AATAAA	-13	NA	91728451	91722108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723859_91725772_91725898_91727241_91727293_91728407
ENSMUSG00000022956.12_91722109_91728451_6	chr16	-	686	6	NNC	ENSMUSG00000022956.12	novel	838	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2526.52373034571	1819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGGCGTGAGGAGCCTT	935	False	NA	-8	True	AATAAA	-13	NA	91728451	91722108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91728377
ENSMUSG00000022956.12_91722109_91728451_7	chr16	-	699	7	NNC	ENSMUSG00000022956.12	novel	838	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2370.32020809191	16499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGGCGTGAGGAGCCTT	935	False	NA	-8	True	AATAAA	-13	NA	91728451	91722108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727285_91728407
ENSMUSG00000022957.21_91700917_91709224_1	chr16	+	1337	7	FSM	ENSMUSG00000022957.21	ENSMUST00000232198.2	1167	7	-34	-136	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3.24893144826965	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTTGGAGAACTGTG	NA	False	NA	NA	False	TATAAA	-22	NA	91700916	91709224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_91701102_91702174_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092_91706267_91708748
ENSMUSG00000022961.19_91444773_91454702_1	chr16	+	3471	3	ISM	ENSMUSG00000022961.19	ENSMUST00000114036.9	7945	5	5	6219	0	-6219	5prime_fragment	FALSE	canonical	3	478	junction_2	6	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCCACCATTGCCACCC	NA	False	NA	NA	False	NA	NA	NA	91444772	91454702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_91444873_91448517_91448685_91451498
ENSMUSG00000022962.16_91418281_91443819_1	chr16	-	3288	22	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	424.286793863198	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTAGCATTTATTTAAGA	NA	False	NA	NA	False	AATAAA	-23	NA	91443819	91418280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435678_91436223_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ENSMUSG00000022962.16_91418281_91443819_2	chr16	-	3281	22	NNC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	484.087307767876	1229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTAGCATTTATTTAAGA	NA	False	NA	NA	False	AATAAA	-23	NA	91443819	91418280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435620_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ENSMUSG00000022962.16_91418281_91443819_4	chr16	-	1285	12	NNC	ENSMUSG00000022962.16	novel	1865	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	573.190000662524	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTAGCATTTATTTAAGA	NA	False	NA	NA	False	AATAAA	-23	NA	91443819	91418280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91418339_91430926_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ENSMUSG00000022962.16_91430293_91443819_1	chr16	-	1859	11	NNC	ENSMUSG00000022962.16	novel	1865	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	598.465504436137	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGATTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-22	NA	91443819	91430292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435678_91436223_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ENSMUSG00000022962.16_91430293_91443819_2	chr16	-	2018	11	NIC	ENSMUSG00000022962.16	novel	1865	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	565.765154458986	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGATTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-22	NA	91443819	91430292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443614
ENSMUSG00000022964.15_91371391_91394573_1	chr16	-	2224	7	NNC	ENSMUSG00000022964.15	novel	2347	7	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	32.5358776327508	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGAATCTGAGTCTTTT	NA	False	NA	-6	True	AATAAA	-24	NA	91394573	91371390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394477
ENSMUSG00000022964.15_91371391_91394573_2	chr16	-	2232	7	FSM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	115	0	-21	0	multi-exon	FALSE	canonical	3	77	junction_3	6.43989302878722	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGAATCTGAGTCTTTT	NA	False	NA	-6	True	AATAAA	-24	NA	91394573	91371390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
ENSMUSG00000022964.15_91372507_91394573_1	chr16	-	1116	7	FSM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	115	1116	-21	139	multi-exon	FALSE	canonical	3	77	junction_3	6.43989302878722	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGTTTGAAAGCCCTCTT	NA	False	NA	NA	False	ATTAAA	-44	NA	91394573	91372506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
ENSMUSG00000022972.11_90722697_90731714_1	chr16	-	1142	7	FSM	ENSMUSG00000022972.11	ENSMUST00000023694.11	1430	7	288	0	0	0	multi-exon	FALSE	canonical	3	724	junction_4	16.7994708911389	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGTGTCATGAGAGC	NA	False	NA	2	True	NA	NA	NA	90731714	90722696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90726803_90726872_90727881_90728050_90731469
ENSMUSG00000022972.11_90722697_90731815_1	chr16	-	1243	7	FSM	ENSMUSG00000022972.11	ENSMUST00000023694.11	1430	7	187	0	0	0	multi-exon	FALSE	canonical	3	724	junction_4	16.7994708911389	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGTGTCATGAGAGC	NA	False	NA	2	True	NA	NA	NA	90731815	90722696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90726803_90726872_90727881_90728050_90731469
ENSMUSG00000022972.11_90722841_90731714_1	chr16	-	998	7	FSM	ENSMUSG00000022972.11	ENSMUST00000023694.11	1430	7	288	144	0	0	multi-exon	FALSE	canonical	3	724	junction_4	16.7994708911389	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCTCAACCCACCAAATT	NA	False	NA	-48	True	CATAAA	-36	NA	90731714	90722840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90726803_90726872_90727881_90728050_90731469
ENSMUSG00000022978.12_90516200_90524027_1	chr16	-	1068	5	FSM	ENSMUSG00000022978.12	ENSMUST00000099554.5	1333	5	265	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	13.865424623862	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGGTTTTTTTTTT	NA	False	NA	0	True	AATAAA	-25	NA	90524027	90516199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_90516867_90517541_90517639_90518523_90518647_90523180_90523248_90523913
ENSMUSG00000022992.18_98416701_98431819_2	chr15	-	2108	10	FSM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	326	1162	306	0	multi-exon	FALSE	canonical	1	385	junction_5	229.121025758101	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTAAAGTGATCTG	NA	False	NA	-21	True	ATTAAA	-14	NA	98431819	98416700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ENSMUSG00000022992.18_98416701_98431819_3	chr15	-	2006	10	FSM	ENSMUSG00000022992.18	ENSMUST00000023727.17	2311	10	306	-1	306	0	multi-exon	TRUE	canonical	1	3	junction_5	382.650535212961	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTAAAGTGATCTG	NA	False	NA	-21	True	ATTAAA	-14	NA	98431819	98416700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426907_98427166_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ENSMUSG00000023004.9_98829306_98832319_1	chr15	-	1616	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	127	0	0	0	multi-exon	FALSE	canonical	3	3388	junction_1	4057.60923040485	62876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	158	False	NA	NA	False	AGTAAA	-18	NA	98832319	98829305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
ENSMUSG00000023004.9_98830134_98832319_1	chr15	-	788	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	127	828	0	523	multi-exon	FALSE	canonical	3	3388	junction_1	4057.60923040485	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTATTAGCCAGATTGTG	158	False	NA	NA	False	NA	NA	NA	98832319	98830133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
ENSMUSG00000023007.16_99193122_99214899_1	chr15	+	3171	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	102	junction_21	28.1893596947501	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99193121	99214899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ENSMUSG00000023010.16_99290867_99306496_1	chr15	+	908	10	NNC	ENSMUSG00000023010.16	novel	1148	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	589.988888784262	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTTAGTGGTTTTCTCT	NA	False	NA	12	True	AATGAA	-18	NA	99290866	99306496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306361
ENSMUSG00000023010.16_99290867_99306568_1	chr15	+	1022	11	FSM	ENSMUSG00000023010.16	ENSMUST00000160635.8	871	11	0	-151	0	53	multi-exon	FALSE	canonical	3	18	junction_1	734.518481727996	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCGTGTCCTGGGTTCTT	NA	False	NA	26	True	AATATA	-13	NA	99290866	99306568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_99290922_99291575_99291612_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUSG00000023010.16_99290867_99306568_2	chr15	+	981	10	NNC	ENSMUSG00000023010.16	novel	1148	11	NA	NA	0	53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	590.350199478827	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCGTGTCCTGGGTTCTT	NA	False	NA	26	True	AATATA	-13	NA	99290866	99306568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_99290922_99299465_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUSG00000023010.16_99290867_99307930_1	chr15	+	2342	10	NNC	ENSMUSG00000023010.16	novel	2452	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	589.988888784262	2007	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTCTCAGTGTTAAAT	NA	False	NA	15	True	AATAAA	-20	NA	99290866	99307930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306361
ENSMUSG00000023010.16_99290867_99307930_3	chr15	+	2384	11	FSM	ENSMUSG00000023010.16	ENSMUST00000160635.8	871	11	0	-1513	0	0	multi-exon	FALSE	canonical	3	18	junction_1	734.518481727996	2828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTCTCAGTGTTAAAT	NA	False	NA	15	True	AATAAA	-20	NA	99290866	99307930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_99290922_99291575_99291612_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUSG00000023010.16_99290867_99307930_4	chr15	+	2563	11	FSM	ENSMUSG00000023010.16	ENSMUST00000161250.8	1148	11	0	-1415	0	0	multi-exon	FALSE	canonical	3	52	junction_1	709.276455269735	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTCTCAGTGTTAAAT	NA	False	NA	15	True	AATAAA	-20	NA	99290866	99307930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_99290922_99297537_99297753_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUSG00000023010.16_99291100_99307930_1	chr15	+	2458	10	FSM	ENSMUSG00000023010.16	ENSMUST00000159209.8	944	10	0	-1514	0	0	multi-exon	FALSE	canonical	3	114	junction_1	555.512064964378	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTCTCAGTGTTAAAT	NA	False	NA	15	True	AATAAA	-20	NA	99291099	99307930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_99291265_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUSG00000023015.15_99519155_99549504_3	chr15	-	2123	17	FSM	ENSMUSG00000023015.15	ENSMUST00000023756.12	2933	17	33	777	-11	-777	multi-exon	FALSE	canonical	3	453	junction_16	66.1194172974173	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGTTGCATAGCTC	NA	False	NA	-5	True	AATAAA	-18	NA	99549504	99519154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ENSMUSG00000023015.15_99519155_99549504_4	chr15	-	2254	18	FSM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	20	778	-11	-777	multi-exon	FALSE	canonical	3	159	junction_16	174.822975218819	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGTTGCATAGCTC	NA	False	NA	-5	True	AATAAA	-18	NA	99549504	99519154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541273_99541405_99549387
ENSMUSG00000023020.4_99623558_99625929_1	chr15	+	574	2	NNC	ENSMUSG00000023020.4	novel	408	2	NA	NA	0	478	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5321	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTAGTGGTTCTGTG	NA	False	NA	20	True	ATTAAA	-15	NA	99623557	99625929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_99623730_99625527
ENSMUSG00000023020.4_99623558_99625999_1	chr15	+	644	2	NNC	ENSMUSG00000023020.4	novel	408	2	NA	NA	0	548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5681	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTCTCTCTCTTTCTT	NA	False	NA	29	True	AGTAAA	-36	NA	99623557	99625999	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_99623730_99625527
ENSMUSG00000023021.16_99633473_99670343_1	chr15	-	2064	11	FSM	ENSMUSG00000023021.16	ENSMUST00000109035.11	2775	11	0	711	0	0	multi-exon	FALSE	canonical	2	12	junction_1	103.150569557322	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670343	99633472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_99634318_99635427_99635535_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ENSMUSG00000023021.16_99633473_99670343_2	chr15	-	1866	10	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_2	75.4335616434901	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670343	99633472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_99634318_99636545_99636612_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ENSMUSG00000023022.15_99676351_99773297_1	chr15	-	4196	11	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_10	266.84948941304	1670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7278	False	NA	-3	True	AATAAA	-15	NA	99773297	99676350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741698_99773213
ENSMUSG00000023022.15_99677732_99773297_1	chr15	-	2822	11	FSM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	40	1381	0	-1381	multi-exon	FALSE	canonical	3	692	junction_4	128.449367456597	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGGTGTGGTTAGATA	7278	False	NA	NA	False	NA	NA	NA	99773297	99677731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ENSMUSG00000023022.15_99677992_99773297_1	chr15	-	2562	11	FSM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	40	1641	0	1128	multi-exon	FALSE	canonical	3	692	junction_4	128.449367456597	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATTCTAAGCGCATTGT	7278	False	NA	NA	False	NA	NA	NA	99773297	99677991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ENSMUSG00000023025.17_99870717_99891245_1	chr15	+	802	7	ISM	ENSMUSG00000023025.17	ENSMUST00000230956.2	2192	15	0	17334	0	870	5prime_fragment	FALSE	canonical	3	302	junction_1	130.68973010744	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCTGTGAGTTTGCGCA	NA	False	NA	NA	False	AATGAA	-16	NA	99870716	99891245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203
ENSMUSG00000023025.17_99870717_99910968_1	chr15	+	3203	16	FSM	ENSMUSG00000023025.17	ENSMUST00000100206.4	6530	16	56	3271	0	-827	multi-exon	FALSE	canonical	3	323	junction_1	85.9835643209406	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATATGACTAACTGTTT	NA	False	NA	NA	False	NA	NA	NA	99870716	99910968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ENSMUSG00000023025.17_99870717_99912229_1	chr15	+	4464	16	FSM	ENSMUSG00000023025.17	ENSMUST00000100206.4	6530	16	56	2010	0	337	multi-exon	FALSE	canonical	3	323	junction_1	85.9835643209406	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTTGATAAGGATTAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	99870716	99912229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ENSMUSG00000023027.14_100125752_100159129_1	chr15	+	2275	8	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	0	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	110.684143362257	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTCGGAATGCAAAACAT	NA	False	NA	17	True	ATTAAA	-20	NA	100125751	100159129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158177_100158218
ENSMUSG00000023027.14_100125752_100159129_2	chr15	+	2273	8	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	110.684143362257	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTCGGAATGCAAAACAT	NA	False	NA	17	True	ATTAAA	-20	NA	100125751	100159129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158165_100158208
ENSMUSG00000023030.17_100285779_100320898_1	chr15	-	2862	18	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	-15	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	53.8380244062904	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTAGGGGTGCGA	NA	False	NA	NA	False	AATAAA	-22	NA	100320898	100285778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_100286319_100286443_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ENSMUSG00000023030.17_100285779_100320898_2	chr15	-	2841	18	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.8380244062904	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTAGGGGTGCGA	NA	False	NA	NA	False	AATAAA	-22	NA	100320898	100285778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_100286362_100286507_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ENSMUSG00000023031.9_100572303_100581067_1	chr15	-	804	5	NNC	ENSMUSG00000023031.9	novel	456	4	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	13.4420050587701	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGCTTGCATTTATAA	5887	False	NA	1	True	AATAAA	-19	NA	100581067	100572302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_100572599_100573204_100573355_100579023_100579170_100580767_100580847_100580934
ENSMUSG00000023031.9_100572303_100583245_1	chr15	-	1086	6	ISM	ENSMUSG00000023031.9	ENSMUST00000023775.9	1108	8	2557	1	0	0	3prime_fragment	FALSE	canonical	2	9	junction_4	10.6695829346793	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGCTTGCATTTATAA	8442	False	NA	1	True	AATAAA	-19	NA	100583245	100572302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_100572599_100573204_100573355_100579023_100579170_100580767_100580905_100582460_100582587_100583014
ENSMUSG00000023034.8_101165919_101172676_1	chr15	+	2403	7	NNC	ENSMUSG00000023034.8	novel	893	2	NA	NA	1192	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	68.8486665730636	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTTTTTTTCTGTTT	NA	False	NA	19	True	AATAAA	-21	NA	101165918	101172676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_101165971_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ENSMUSG00000023039.18_101310283_101325672_1	chr15	+	1572	9	FSM	ENSMUSG00000023039.18	ENSMUST00000068904.9	4094	9	0	2522	0	2	multi-exon	FALSE	canonical	3	14	junction_1	16.0078105935821	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCATCGGCTAGCTAG	NA	False	NA	8	True	AATAAA	-15	NA	101310282	101325672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_101310661_101311849_101312062_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
ENSMUSG00000023044.3_102085434_102088557_1	chr15	-	1364	6	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-261	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	45.4954942824012	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGGTATGTTTTAAAG	NA	False	NA	NA	False	AATAAA	-17	NA	102088557	102085433	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088405
ENSMUSG00000023047.12_102355299_102363068_1	chr15	+	1474	7	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	1497	-3	1416	0	3prime_fragment	FALSE	canonical	2	6	junction_1	61.5864342926987	705	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCATCAATGTGTTTTT	NA	False	NA	16	True	AATAAA	-16	NA	102355298	102363068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_102355548_102355665_102355897_102360583_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
ENSMUSG00000023047.12_102360363_102363068_1	chr15	+	1060	6	NNC	ENSMUSG00000023047.12	novel	611	3	NA	NA	-231	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.019996722386	666	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCATCAATGTGTTTTT	NA	False	NA	16	True	AATAAA	-16	NA	102360362	102363068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_102360429_102360583_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
ENSMUSG00000023047.12_102360594_102363068_1	chr15	+	984	5	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	6792	-3	0	0	3prime_fragment	FALSE	canonical	3	32	junction_1	46.916814683011	669	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCATCAATGTGTTTTT	NA	False	NA	16	True	AATAAA	-16	NA	102360593	102363068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
ENSMUSG00000023047.12_102360864_102363068_1	chr15	+	837	4	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	7062	-3	106	0	3prime_fragment	FALSE	canonical	3	123	junction_2	13.3666251038423	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCATCAATGTGTTTTT	NA	False	NA	16	True	AATAAA	-16	NA	102360863	102363068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_102360995_102361179_102361328_102361466_102361604_102362647
ENSMUSG00000023047.12_102360864_102363068_2	chr15	+	689	3	NIC	ENSMUSG00000023047.12	novel	1938	11	NA	NA	106	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	69.5	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCATCAATGTGTTTTT	NA	False	NA	16	True	AATAAA	-16	NA	102360863	102363068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_102360995_102361466_102361604_102362647
ENSMUSG00000023047.12_102360864_102363068_3	chr15	+	552	2	ISM	ENSMUSG00000023047.12	ENSMUST00000162893.2	611	3	270	-88	106	0	3prime_fragment	FALSE	canonical	3	16	junction_1	0	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCATCAATGTGTTTTT	NA	False	NA	16	True	AATAAA	-16	NA	102360863	102363068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_102360995_102362647
ENSMUSG00000023048.14_102368518_102371219_1	chr15	+	1034	3	NNC	ENSMUSG00000023048.14	novel	1020	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	371.5	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTGTGCCATTACCTT	3286	False	NA	18	True	AATAAA	-21	NA	102368517	102371219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_102368582_102368804_102369161_102370605
ENSMUSG00000023050.10_102379088_102407324_3	chr15	-	1677	15	NIC	ENSMUSG00000023050.10	novel	5185	14	NA	NA	11811	26993	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	625	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACCCCGGGGCGGGTGG	NA	False	NA	NA	False	NA	NA	NA	102407324	102379087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000023050.10_102379220_102407324_2	chr15	-	1464	13	NNC	ENSMUSG00000023050.10	novel	5185	14	NA	NA	11811	26861	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGGAAAAGGGGAGCGGG	NA	False	NA	NA	False	NA	NA	NA	102407324	102379219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_102379239_102381695_102381862_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000023050.10_102379220_102407324_3	chr15	-	1545	15	NIC	ENSMUSG00000023050.10	novel	5185	14	NA	NA	11811	26861	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGGAAAAGGGGAGCGGG	NA	False	NA	NA	False	NA	NA	NA	102407324	102379219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000023051.12_102426890_102432111_1	chr15	+	1510	9	FSM	ENSMUSG00000023051.12	ENSMUST00000154948.8	951	9	-102	-457	0	0	multi-exon	FALSE	canonical	3	32	junction_3	117.676463237132	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102426889	102432111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429572_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ENSMUSG00000023051.12_102426890_102432111_2	chr15	+	1522	9	NNC	ENSMUSG00000023051.12	novel	1523	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	120.101974900499	1071	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102426889	102432111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_102427038_102427561_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ENSMUSG00000023051.12_102426890_102432111_4	chr15	+	1424	8	NIC	ENSMUSG00000023051.12	novel	1523	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	125.715584408876	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102426889	102432111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_102427038_102427556_102427727_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ENSMUSG00000023051.12_102427161_102432111_1	chr15	+	1775	8	ISM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	267	0	0	0	3prime_fragment	FALSE	canonical	3	312	junction_2	30.5647522750088	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102427160	102432111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ENSMUSG00000023051.12_102427161_102432111_2	chr15	+	1632	8	FSM	ENSMUSG00000023051.12	ENSMUST00000142194.3	782	8	-76	-774	0	0	multi-exon	FALSE	canonical	3	98	junction_1	99.7595067333107	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102427160	102432111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102427280_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
ENSMUSG00000023051.12_102427161_102432111_3	chr15	+	1481	9	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	141.351014764663	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102427160	102432111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_102427280_102427556_102427727_102428909_102429013_102429572_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ENSMUSG00000023051.12_102427161_102432111_4	chr15	+	1395	8	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	148.535435200507	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102427160	102432111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_102427280_102427556_102427727_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ENSMUSG00000023067.15_29312743_29319701_1	chr17	+	1912	3	NIC	ENSMUSG00000023067.15	novel	1913	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	579.5	4528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGTCATTAGAGCAAA	4647	False	NA	29	True	NA	NA	NA	29312742	29319701	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_29312836_29317376_29317812_29318317
ENSMUSG00000023067.15_29312743_29319701_2	chr17	+	2424	2	ISM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	0	-5	0	0	intron_retention	FALSE	canonical	3	1306	junction_1	0	1684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGTCATTAGAGCAAA	4647	False	NA	29	True	NA	NA	NA	29312742	29319701	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_29312836_29317370
ENSMUSG00000023072.15_35096480_35121618_1	chr7	+	1474	12	NNC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	0	959	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	40.0712175924172	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTCATCCCACGTTTT	NA	False	NA	NA	False	NA	NA	NA	35096479	35121618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120455_35121492
ENSMUSG00000023072.15_35096480_35129878_1	chr7	+	2527	17	ISM	ENSMUSG00000023072.15	ENSMUST00000141704.8	2825	20	20	8234	0	-2121	5prime_fragment	FALSE	canonical	2	50	junction_16	33.5018073206506	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGATATTGTCTGTACTCA	NA	False	NA	11	True	AATAAA	-17	NA	35096479	35129878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35129339
ENSMUSG00000023072.15_35131505_35138110_1	chr7	+	1056	3	ISM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	35025	4	3758	-2	3prime_fragment	FALSE	canonical	3	122	junction_2	6	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTTTTGCATGTTTATT	NA	False	NA	6	True	AATAAA	-16	NA	35131504	35138110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_35132033_35134898_35135069_35137752
ENSMUSG00000023074.12_52433475_52459379_2	chrX	-	2186	6	FSM	ENSMUSG00000023074.12	ENSMUST00000023836.4	1763	6	0	-423	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.7804182083788	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTTCTCTCTCCGTTC	NA	False	NA	-4	True	CATAAA	-18	NA	52459379	52433474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_52434867_52436580_52436743_52444529_52444751_52446286_52446363_52446450_52446705_52459298
ENSMUSG00000023088.18_14179445_14292739_1	chr16	+	5909	31	FSM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	21	862	0	833	multi-exon	FALSE	canonical	3	92	junction_2	17.5139626837814	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCATTTTATTTTTATTT	7179	False	NA	20	True	AGTAAA	-26	NA	14179444	14292739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ENSMUSG00000023089.13_24518665_24527569_1	chr6	-	432	5	FSM	ENSMUSG00000023089.13	ENSMUST00000023851.9	875	5	443	0	0	0	multi-exon	FALSE	canonical	3	2597	junction_4	429.359042643799	16401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTCCATGTTATTG	-4	True	NA	-31	True	ATTAAA	-27	NA	24527569	24518664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_24518824_24519190_24519257_24522657_24522775_24527271_24527317_24527524
ENSMUSG00000023092.17_55777147_55838703_1	chrX	+	2166	6	NIC	ENSMUSG00000023092.17	novel	2356	7	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	48.3553513067582	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCCTCCTGTCTTTTTA	NA	False	NA	9	True	AATAAA	-15	NA	55777146	55838703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55837203
ENSMUSG00000023092.17_55777147_55838703_2	chrX	+	2553	8	NIC	ENSMUSG00000023092.17	novel	2770	8	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	57.513796037941	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCCTCCTGTCTTTTTA	NA	False	NA	9	True	AATAAA	-15	NA	55777146	55838703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55836598_55836799_55837203
ENSMUSG00000023104.10_134611611_134626909_1	chr5	+	1178	11	FSM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	67	3750	0	100	multi-exon	FALSE	canonical	3	1115	junction_7	96.2091991443646	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTCTTGTACCCCAGGC	NA	False	NA	31	True	NA	NA	NA	134611610	134626909	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ENSMUSG00000023104.10_134611611_134627182_1	chr5	+	1579	12	NNC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	502.73133320734	2888	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	19	True	GATAAA	-15	NA	134611610	134627182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619491_134619620_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ENSMUSG00000023104.10_134611611_134627182_2	chr5	+	1451	11	FSM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	67	3477	0	0	multi-exon	FALSE	canonical	3	1115	junction_7	96.2091991443646	2944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	19	True	GATAAA	-15	NA	134611610	134627182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ENSMUSG00000023106.16_124045338_124065485_1	chr5	+	828	7	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	0	289	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	572.327630528762	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCGGCGTCCTCACTGT	9078	False	NA	8	True	AGTAAA	-15	NA	124045337	124065485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_124045430_124046162_124046278_124055240_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ENSMUSG00000023106.16_124045338_124065485_2	chr5	+	822	7	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	0	289	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	572.327630528762	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCGGCGTCCTCACTGT	9078	False	NA	8	True	AGTAAA	-15	NA	124045337	124065485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_124045430_124046162_124046272_124055240_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ENSMUSG00000023106.16_124045338_124065652_1	chr5	+	888	6	NIC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	0	456	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	613.293600162271	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGATTTTTTTTTTTCT	9078	False	NA	8	True	AATAAA	-17	NA	124045337	124065652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_124045430_124046162_124046278_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ENSMUSG00000023106.16_124045338_124065652_2	chr5	+	995	7	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	0	456	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	572.327630528762	3218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGATTTTTTTTTTTCT	9078	False	NA	8	True	AATAAA	-17	NA	124045337	124065652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_124045430_124046162_124046278_124055240_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ENSMUSG00000023106.16_124045338_124065652_3	chr5	+	989	7	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	0	456	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	572.327630528762	1783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGATTTTTTTTTTTCT	9078	False	NA	8	True	AATAAA	-17	NA	124045337	124065652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_124045430_124046162_124046272_124055240_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ENSMUSG00000023106.16_124045338_124065652_4	chr5	+	979	7	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	0	456	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	572.327630528762	1568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGATTTTTTTTTTTCT	9078	False	NA	8	True	AATAAA	-17	NA	124045337	124065652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_124045430_124046162_124046284_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ENSMUSG00000023106.16_124045338_124066898_1	chr5	+	2241	7	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	572.327630528762	3590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCGCTAACTGAATTTG	9078	False	NA	NA	False	AATGAA	-2	NA	124045337	124066898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_124045430_124046162_124046278_124055240_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ENSMUSG00000023110.13_54744644_54754827_1	chr14	-	2417	16	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_15	172.951425422156	1718	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTGCTTCTTTCTGCCT	4850	False	NA	-11	True	AATAAA	-25	NA	54754827	54744643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54754703
ENSMUSG00000023110.13_54744644_54754827_2	chr14	-	2530	17	NNC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	193.808176749589	1862	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTGCTTCTTTCTGCCT	4850	False	NA	-11	True	AATAAA	-25	NA	54754827	54744643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747089_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ENSMUSG00000023110.13_54744644_54754827_3	chr14	-	2535	17	NNC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	194.076811066521	1861	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTGCTTCTTTCTGCCT	4850	False	NA	-11	True	AATAAA	-25	NA	54754827	54744643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748507_54748593_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ENSMUSG00000023118.16_18758345_18787493_1	chr7	+	3386	25	ISM	ENSMUSG00000023118.16	ENSMUST00000023882.14	4116	27	43	1049	0	-316	5prime_fragment	FALSE	canonical	3	103	junction_24	18.8567332507221	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGACCATCCTGGAGGCC	NA	False	NA	NA	False	NA	NA	NA	18758344	18787493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471
ENSMUSG00000023150.15_151220269_151240010_1	chr1	+	3307	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	41	163	0	-156	multi-exon	FALSE	canonical	3	1145	junction_2	98.7764172879585	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTTCAGAAGTGTTTT	NA	False	NA	13	True	ATTAAA	-23	NA	151220268	151240010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUSG00000023169.16_96473868_96539397_1	chr15	-	2737	16	FSM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	446	0	446	0	multi-exon	FALSE	canonical	3	92	junction_15	98.2259074220691	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGGTTTGTTTCCCTC	NA	False	NA	-3	True	ATTAAA	-24	NA	96539397	96473867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
ENSMUSG00000023169.16_96474126_96539397_1	chr15	-	2479	16	FSM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	446	258	446	-258	multi-exon	FALSE	canonical	3	92	junction_15	98.2259074220691	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTCATAAATAATTTGCC	NA	False	NA	NA	False	NA	NA	NA	96539397	96474125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
ENSMUSG00000023169.16_96474126_96540093_1	chr15	-	2101	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	38	4827	0	-258	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTCATAAATAATTTGCC	NA	False	NA	NA	False	NA	NA	NA	96540093	96474125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ENSMUSG00000023169.16_96474126_96540205_1	chr15	-	2213	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	-74	4827	-74	-258	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTCATAAATAATTTGCC	NA	False	NA	NA	False	NA	NA	NA	96540205	96474125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ENSMUSG00000023170.15_69804876_69807417_1	chr11	+	1362	10	FSM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	-142	0	0	0	multi-exon	FALSE	canonical	3	266	junction_9	31.9443961352292	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCCTGAGTGCTGTTTA	4091	False	NA	12	True	AATAAA	-22	NA	69804875	69807417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ENSMUSG00000023170.15_69804876_69807417_2	chr11	+	1152	11	NNC	ENSMUSG00000023170.15	novel	1159	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.623816106265	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCCTGAGTGCTGTTTA	4091	False	NA	12	True	AATAAA	-22	NA	69804875	69807417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_69804901_69805110_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ENSMUSG00000023175.16_79540342_79547363_1	chr10	+	804	7	FSM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	17	440	0	-181	multi-exon	FALSE	canonical	3	6175	junction_5	429.072416835304	2295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTACGCCAGAGGAACG	NA	False	NA	NA	False	NA	NA	NA	79540341	79547363	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ENSMUSG00000023175.16_79540342_79547657_1	chr10	+	1098	7	FSM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	17	146	0	0	multi-exon	FALSE	canonical	3	6175	junction_5	429.072416835304	4578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAAGTGTTGTCACTAC	NA	False	NA	80	True	NA	NA	NA	79540341	79547657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ENSMUSG00000023175.16_79540342_79547803_1	chr10	+	1233	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	2689.50535229064	7727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	21	True	AATAAA	-15	NA	79540341	79547803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546769_79547327
ENSMUSG00000023235.15_4375210_4410007_1	chr8	+	1150	7	NIC	ENSMUSG00000023235.15	novel	867	8	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	6.71854812358213	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGACTGACAGTGATGT	NA	False	NA	NA	False	AATAAA	-22	NA	4375209	4410007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_4375289_4377756_4377851_4399771_4399895_4403882_4404001_4404090_4404204_4407592_4407690_4409481
ENSMUSG00000023243.10_20190125_20231877_1	chr14	-	3188	5	NNC	ENSMUSG00000023243.10	novel	3392	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	53.0394900050896	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGTATGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	20231877	20190124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_20192526_20194702_20194872_20195023_20195051_20196632_20196681_20231334
ENSMUSG00000023262.14_106310189_106315387_1	chr9	-	1404	15	NNC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	129.549691041622	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTAATACTGTGGACA	NA	False	NA	-16	True	AATAAA	-18	NA	106315387	106310188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_106310464_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314933_106315331
ENSMUSG00000023262.14_106310189_106315451_1	chr9	-	1448	15	NNC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	139.5177737196	1572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTAATACTGTGGACA	NA	False	NA	-16	True	AATAAA	-18	NA	106315451	106310188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312899_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314937_106315331
ENSMUSG00000023284.16_110258149_110277660_1	chr5	+	2967	5	FSM	ENSMUSG00000023284.16	ENSMUST00000112528.8	3158	5	191	0	-53	0	multi-exon	FALSE	canonical	3	28	junction_1	12.7744862910412	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTATTTGTGAAGATGT	2140	False	NA	NA	False	NA	NA	NA	110258148	110277660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112
ENSMUSG00000023284.16_110258202_110277660_1	chr5	+	3139	5	FSM	ENSMUSG00000023284.16	ENSMUST00000147631.8	748	5	-15	-2376	0	0	multi-exon	FALSE	canonical	3	14	junction_1	18.0052075800308	1821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTATTTGTGAAGATGT	2193	False	NA	NA	False	NA	NA	NA	110258201	110277660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_110258409_110259762_110259933_110271625_110271747_110272218_110272312_110275112
ENSMUSG00000023307.15_37185117_37199221_1	chr19	+	1305	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	175	329	142	-155	multi-exon	FALSE	canonical	3	653	junction_3	49.1747902893342	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACGCCTCTTTTGTAT	NA	False	NA	22	True	ATTAAA	-16	NA	37185116	37199221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
ENSMUSG00000023330.13_125994061_126007197_2	chr2	+	1199	4	NIC	ENSMUSG00000023330.13	novel	1342	5	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	74.5534856477028	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGCCCTTACCTTTCGA	7279	False	NA	26	True	ATTAAA	-24	NA	125994060	126007197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_125994135_125996465_125996781_126001689_126001949_126006646
ENSMUSG00000023345.18_106158579_106227076_1	chr9	+	1343	11	NIC	ENSMUSG00000023345.18	novel	1242	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	123.511133101433	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCCACATCTTACCCAG	9876	False	NA	7	True	AATAAA	-19	NA	106158578	106227076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_106158656_106160053_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207099_106207216_106226880
ENSMUSG00000023348.12_137308160_137312469_1	chr5	-	1727	9	FSM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	197	244	0	-244	multi-exon	FALSE	canonical	3	95	junction_6	14.9248115565993	360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAAGTCTGTTCTTTAT	1724	False	NA	-1	True	TTTAAA	-5	NA	137312469	137308159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135_137310306_137310401_137310496_137310967_137311352_137311612_137311739_137311842_137311971_137312221
ENSMUSG00000023393.16_180367056_180384073_1	chr2	+	2205	13	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	39	junction_2	51.5985437994351	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367055	180384073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_180367245_180373672_180373801_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ENSMUSG00000023393.16_180367172_180384073_1	chr2	+	2036	11	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_7	65.8692644561938	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367171	180384073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ENSMUSG00000023393.16_180367172_180384073_3	chr2	+	2059	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	57	junction_3	52.1550453966879	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367171	180384073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ENSMUSG00000023403.15_49424244_49446440_1	chr6	+	655	4	ISM	ENSMUSG00000023403.15	ENSMUST00000024171.14	3237	24	51706	-5	8746	5	3prime_fragment	FALSE	canonical	3	190	junction_1	16.1314048434171	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	NA	False	NA	NA	False	AATAAA	-27	NA	49424243	49446440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_49424328_49434589_49434713_49442402_49442472_49446061
ENSMUSG00000023452.20_32893649_32942970_1	chr5	-	2137	9	NNC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	245.173917862402	1667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCGTAGCTTTGTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	32942970	32893648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_32894516_32894537_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
ENSMUSG00000023452.20_32894105_32942970_1	chr5	-	1703	8	FSM	ENSMUSG00000023452.20	ENSMUST00000061895.16	2183	8	20	460	0	-337	multi-exon	FALSE	canonical	3	685	junction_2	53.5235976948867	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTATCCTGGGCTCTGC	NA	False	NA	2	True	AGTAAA	-21	NA	32942970	32894104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
ENSMUSG00000023452.20_32894105_32942970_2	chr5	-	1681	9	NNC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	0	-337	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	245.173917862402	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTATCCTGGGCTCTGC	NA	False	NA	2	True	AGTAAA	-21	NA	32942970	32894104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_32894516_32894537_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
ENSMUSG00000023456.17_124787555_124791121_1	chr6	-	1463	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	138	0	0	0	multi-exon	FALSE	canonical	3	1828	junction_3	39.1652482012647	13499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAACCTCTTTGTCCCAG	NA	False	NA	-23	True	AATACA	-16	NA	124791121	124787554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
ENSMUSG00000023456.17_124787678_124791121_1	chr6	-	1340	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	138	123	0	-123	multi-exon	FALSE	canonical	3	1828	junction_3	39.1652482012647	13446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGGGTTGTCATAAT	NA	False	NA	-7	True	AATAAA	-14	NA	124791121	124787677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
ENSMUSG00000023456.17_124787678_124791121_2	chr6	-	1334	7	NNC	ENSMUSG00000023456.17	novel	1607	7	NA	NA	0	-123	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	697.240911657433	10737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGGGTTGTCATAAT	NA	False	NA	-7	True	AATAAA	-14	NA	124791121	124787677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_124788351_124788479_124788562_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
ENSMUSG00000023467.19_45165941_45171806_1	chr7	+	1317	8	ISM	ENSMUSG00000023467.19	ENSMUST00000085331.14	1525	10	1915	0	709	0	3prime_fragment	FALSE	canonical	3	20	junction_3	22.1423963085686	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTCTGTGCGTTTGGA	1993	False	NA	17	True	AATAAA	-18	NA	45165940	45171806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_45166111_45167203_45167392_45168009_45168310_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
ENSMUSG00000023467.19_45169012_45171806_1	chr7	+	722	6	NNC	ENSMUSG00000023467.19	novel	2153	11	NA	NA	3780	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	28.0756121927911	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTCTGTGCGTTTGGA	5064	False	NA	17	True	AATAAA	-18	NA	45169011	45171806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_45169075_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
ENSMUSG00000023467.19_45169038_45173070_1	chr7	+	928	6	ISM	ENSMUSG00000023467.19	ENSMUST00000210868.2	1664	11	4977	-14	3806	14	3prime_fragment	FALSE	canonical	3	4	junction_5	28.0756121927911	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTGTGGAATTCTATTG	5090	False	NA	NA	False	AATAAA	-24	NA	45169037	45173070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646_45171773_45172884
ENSMUSG00000023467.19_45169073_45172018_1	chr7	+	862	6	ISM	ENSMUSG00000023467.19	ENSMUST00000107762.10	1883	14	5943	0	3841	0	3prime_fragment	FALSE	canonical	2	2	junction_5	28.8679753360017	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTAGTTAGTGTACA	5125	False	NA	NA	False	NA	NA	NA	45169072	45172018	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646_45171773_45171863
ENSMUSG00000023484.15_98953851_98956854_1	chr15	+	1308	8	ISM	ENSMUSG00000023484.15	ENSMUST00000024249.5	1757	9	789	0	0	0	3prime_fragment	FALSE	canonical	3	16	junction_1	6.19743198956682	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTACTGTGTTGGTCTG	94	False	NA	6	True	AATAAA	-18	NA	98953850	98956854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_98954046_98954221_98954318_98954649_98954818_98954913_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956482
ENSMUSG00000023505.14_124807180_124810241_1	chr6	+	1024	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	529	423	0	-254	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	3709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGCTTTAAGAAGTTAGA	1344	False	NA	29	True	ATTAAA	-16	NA	124807179	124810241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ENSMUSG00000023505.14_124807180_124810241_2	chr6	+	1163	6	NIC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	0	-254	intron_retention	FALSE	canonical	0	0	junction_3	431.365552634885	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGCTTTAAGAAGTTAGA	1344	False	NA	29	True	ATTAAA	-16	NA	124807179	124810241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_124807237_124807326_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ENSMUSG00000023505.14_124807180_124810241_3	chr6	+	1681	5	FSM	ENSMUSG00000023505.14	ENSMUST00000134637.8	1917	5	-18	254	0	-254	multi-exon	FALSE	canonical	3	695	junction_1	91.4969261778777	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGCTTTAAGAAGTTAGA	1344	False	NA	29	True	ATTAAA	-16	NA	124807179	124810241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_124807237_124807465_124807614_124808324_124809403_124809528_124809633_124809947
ENSMUSG00000023505.14_124807180_124810495_1	chr6	+	1278	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	529	169	0	0	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	4319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTCATGATCTTTCCC	1344	False	NA	NA	False	CATAAA	-25	NA	124807179	124810495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ENSMUSG00000023505.14_124807180_124810664_1	chr6	+	1447	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	529	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	4469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTTGTCTTGCCT	1344	False	NA	39	True	NA	NA	NA	124807179	124810664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ENSMUSG00000023707.14_124250384_124253148_1	chr5	+	1174	7	FSM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	24	398	0	0	multi-exon	FALSE	canonical	3	59	junction_5	17.423642940939	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTTGGGTCATTCTTT	NA	False	NA	25	True	AATAAA	-40	NA	124250383	124253148	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450_124252709_124252777
ENSMUSG00000023723.18_88095250_88101797_1	chr11	+	760	5	FSM	ENSMUSG00000023723.18	ENSMUST00000024486.14	1332	5	36	536	0	0	multi-exon	FALSE	canonical	3	245	junction_1	23.6999472573253	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTTTGAAACTGTAAAT	NA	False	NA	NA	False	AATAAA	-27	NA	88095249	88101797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_88095312_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ENSMUSG00000023723.18_88095250_88102189_1	chr11	+	1152	5	FSM	ENSMUSG00000023723.18	ENSMUST00000024486.14	1332	5	36	144	0	-144	multi-exon	FALSE	canonical	3	245	junction_1	23.6999472573253	1462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGACGTTTTCCTAGTCA	NA	False	NA	13	True	AATAAA	-19	NA	88095249	88102189	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_88095312_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ENSMUSG00000023755.11_98775659_98778971_1	chr15	-	1306	8	FSM	ENSMUSG00000023755.11	ENSMUST00000147015.2	1038	8	0	-268	0	0	multi-exon	FALSE	canonical	3	19	junction_7	64.8753907620649	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTGTCTGGAGAGAGC	NA	False	NA	-22	True	AATAAA	-20	NA	98778971	98775658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98778595
ENSMUSG00000023755.11_98775659_98779227_1	chr15	-	1127	8	FSM	ENSMUSG00000023755.11	ENSMUST00000024518.11	1261	8	134	0	-12	0	multi-exon	FALSE	canonical	3	165	junction_2	21.3388598283861	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTGTCTGGAGAGAGC	NA	False	NA	-22	True	AATAAA	-20	NA	98779227	98775658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98779030
ENSMUSG00000023755.11_98775659_98779227_2	chr15	-	1122	8	NNC	ENSMUSG00000023755.11	novel	1261	8	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	71.206798574752	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTGTCTGGAGAGAGC	NA	False	NA	-22	True	AATAAA	-20	NA	98779227	98775658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778456_98779030
ENSMUSG00000023764.19_3129338_3143415_1	chr11	-	585	5	ISM	ENSMUSG00000023764.19	ENSMUST00000138126.8	2916	22	6	44406	-4	6230	5prime_fragment	FALSE	canonical	3	72	junction_1	15.833114033569	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTATCCAATGTCTTGTT	8027	False	NA	NA	False	AATACA	-18	NA	3143415	3129337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ENSMUSG00000023764.19_3135568_3143415_1	chr11	-	706	4	NIC	ENSMUSG00000023764.19	novel	831	5	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	45.8427263102398	4420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACACTCTGCACTTTGTT	8027	False	NA	NA	False	NA	NA	NA	3143415	3135567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_3135975_3136064_3136137_3137239_3137411_3143359
ENSMUSG00000023791.19_31903238_31918548_1	chr16	-	1147	7	NNC	ENSMUSG00000023791.19	novel	993	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	189.059440976171	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGGTTAGTTTGTCTT	NA	False	NA	-4	True	AATAAA	-26	NA	31918548	31903237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_31903445_31904054_31904156_31906111_31906326_31908779_31908938_31911161_31911304_31915817_31915882_31918287
ENSMUSG00000023791.19_31903238_31918548_2	chr16	-	982	6	NNC	ENSMUSG00000023791.19	novel	993	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	166.781293915115	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGGTTAGTTTGTCTT	NA	False	NA	-4	True	AATAAA	-26	NA	31918548	31903237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915875_31918287
ENSMUSG00000023791.19_31903238_31918548_3	chr16	-	1141	7	NNC	ENSMUSG00000023791.19	novel	993	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	180.633760840978	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGGTTAGTTTGTCTT	NA	False	NA	-4	True	AATAAA	-26	NA	31918548	31903237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31914370_31914523_31915817_31915882_31918287
ENSMUSG00000023800.16_3569531_3608030_1	chr17	+	1376	7	NIC	ENSMUSG00000023800.16	novel	3184	13	NA	NA	28793	26411	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	846	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGCGCGCAGGGGGTGG	NA	False	NA	NA	False	NA	NA	NA	3569530	3608030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
ENSMUSG00000023805.18_6093374_6130016_1	chr17	+	3104	17	NIC	ENSMUSG00000023805.18	novel	3498	23	NA	NA	18023	35451	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGAGGGCTTGACCCC	NA	False	NA	NA	False	NA	NA	NA	6093373	6130016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ENSMUSG00000023805.18_6094341_6130016_1	chr17	+	2137	17	NIC	ENSMUSG00000023805.18	novel	3498	23	NA	NA	18990	35451	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGAGGGCTTGACCCC	NA	False	NA	NA	False	NA	NA	NA	6094340	6130016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ENSMUSG00000023806.11_7172115_7215680_1	chr17	-	1539	8	FSM	ENSMUSG00000023806.11	ENSMUST00000024572.10	1614	8	75	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	24.1119836409624	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCGTTCAAGGGCCATG	NA	False	NA	NA	False	NA	NA	NA	7215680	7172114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_7172520_7172831_7172919_7175430_7175594_7177506_7177711_7178676_7178823_7181355_7181498_7209067_7209156_7215376
ENSMUSG00000023827.9_12337701_12438532_1	chr17	+	1810	9	NIC	ENSMUSG00000023827.9	novel	967	7	NA	NA	110	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	85.5599205235722	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCAAGTGTTTACACAA	NA	False	NA	28	True	ATTAAA	-19	NA	12337700	12438532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_12337728_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ENSMUSG00000023832.15_13161925_13179607_1	chr17	-	2075	9	FSM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	27	148	0	0	multi-exon	FALSE	canonical	3	922	junction_2	90.2592619901138	1900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTTGTCAGTGAGTT	NA	False	NA	0	True	NA	NA	NA	13179607	13161924	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ENSMUSG00000023832.15_13162330_13179607_1	chr17	-	1670	9	FSM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	27	553	0	0	multi-exon	FALSE	canonical	3	922	junction_2	90.2592619901138	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGCAGGGCCCCCAAAA	NA	False	NA	NA	False	NA	NA	NA	13179607	13162329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ENSMUSG00000023861.18_8502628_8516330_1	chr17	+	757	4	NIC	ENSMUSG00000023861.18	novel	920	5	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	472.094858641307	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACTTAAGTACTCAAAATT	2155	False	NA	NA	False	AATAAA	-33	NA	8502627	8516330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_8502794_8515366_8515464_8515655_8515789_8515969
ENSMUSG00000023861.18_8502628_8516494_1	chr17	+	921	4	NIC	ENSMUSG00000023861.18	novel	920	5	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	472.094858641307	4071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGACTATATATC	2155	False	NA	5	True	AATAAA	-19	NA	8502627	8516494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_8502794_8515366_8515464_8515655_8515789_8515969
ENSMUSG00000023861.18_8502628_8516494_2	chr17	+	927	4	NNC	ENSMUSG00000023861.18	novel	920	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	474.440254990611	4102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGACTATATATC	2155	False	NA	5	True	AATAAA	-19	NA	8502627	8516494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_8502800_8515366_8515464_8515655_8515789_8515969
ENSMUSG00000023861.18_8502684_8516494_1	chr17	+	946	5	FSM	ENSMUSG00000023861.18	ENSMUST00000124023.8	555	5	0	-391	0	1	multi-exon	FALSE	canonical	3	18	junction_2	407.512576493045	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGACTATATATC	2211	False	NA	5	True	AATAAA	-19	NA	8502683	8516494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_8502794_8512246_8512328_8515366_8515464_8515655_8515789_8515969
ENSMUSG00000023861.18_8502684_8516494_2	chr17	+	498	2	NNC	ENSMUSG00000023861.18	novel	555	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGACTATATATC	2211	False	NA	5	True	AATAAA	-19	NA	8502683	8516494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_8502713_8516025
ENSMUSG00000023882.16_21643495_21655420_1	chr17	+	2100	5	NIC	ENSMUSG00000023882.16	novel	2832	5	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	8.22724133595217	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTTGTTTTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	21643494	21655420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_21643580_21647593_21647634_21647998_21648091_21650456_21650584_21653664
ENSMUSG00000023892.9_21670636_21683716_1	chr17	+	441	5	FSM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	0	2133	0	-2133	multi-exon	FALSE	canonical	3	80	junction_1	22.3271135617661	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATGAACCCTCCAACTG	NA	False	NA	NA	False	AATAAA	-13	NA	21670635	21683716	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_21670684_21672698_21672790_21676558_21676651_21681922_21682050_21683633
ENSMUSG00000023902.19_23819836_23829152_2	chr17	+	1858	6	FSM	ENSMUSG00000023902.19	ENSMUST00000095595.9	2698	6	6	834	0	477	multi-exon	FALSE	canonical	3	153	junction_1	55.9335319821661	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCAGCTGATCAGCCAC	885	False	NA	NA	False	NA	NA	NA	23819835	23829152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
ENSMUSG00000023902.19_23819836_23829993_2	chr17	+	2434	5	NIC	ENSMUSG00000023902.19	novel	2609	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_2	109.005733794145	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGATTTTTTTACTTTT	885	False	NA	35	True	AGTAAA	-19	NA	23819835	23829993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_23819934_23824478_23824939_23826553_23826619_23827081_23827140_23828240
ENSMUSG00000023904.11_23887588_23892845_1	chr17	+	1436	14	Fusion	ENSMUSG00000023904.11_ENSMUSG00000043782.10	novel	1941	10	NA	NA	2488	-1303	multi-exon	FALSE	non_canonical	0	0	junction_1	0	955	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCAGTGCGCACGCCGG	6709	False	NA	NA	False	NA	NA	NA	23887587	23892845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_+_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892814
ENSMUSG00000023904.11_23887588_23892845_2	chr17	+	1537	13	Fusion	ENSMUSG00000023904.11_ENSMUSG00000043782.10	novel	1941	10	NA	NA	2488	-1303	multi-exon	FALSE	non_canonical	0	0	junction_1	0	909	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCAGTGCGCACGCCGG	6709	False	NA	NA	False	NA	NA	NA	23887587	23892845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_+_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487
ENSMUSG00000023904.11_23892601_23894201_1	chr17	+	837	4	NNC	ENSMUSG00000023904.11	novel	597	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	146.645453011298	1663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCAGCAGCCTTTGG	NA	False	NA	11	True	AATAAA	-19	NA	23892600	23894201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_23892865_23892942_23893043_23893520_23893650_23893857
ENSMUSG00000023904.11_23892601_23894201_2	chr17	+	915	3	NIC	ENSMUSG00000023904.11	novel	597	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	343	junction_1	29	2403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCAGCAGCCTTTGG	NA	False	NA	11	True	AATAAA	-19	NA	23892600	23894201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_23893043_23893520_23893650_23893857
ENSMUSG00000023904.11_23892935_23894201_1	chr17	+	581	3	ISM	ENSMUSG00000023904.11	ENSMUST00000179928.2	597	4	334	-53	334	0	3prime_fragment	FALSE	canonical	3	343	junction_1	29	1945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCAGCAGCCTTTGG	NA	False	NA	11	True	AATAAA	-19	NA	23892934	23894201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_23893043_23893520_23893650_23893857
ENSMUSG00000023904.11_23892935_23894201_2	chr17	+	452	2	NIC	ENSMUSG00000023904.11	novel	946	3	NA	NA	334	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCAGCAGCCTTTGG	NA	False	NA	11	True	AATAAA	-19	NA	23892934	23894201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_23893043_23893857
ENSMUSG00000023906.4_23898346_23901420_1	chr17	+	1499	3	FSM	ENSMUSG00000023906.4	ENSMUST00000024699.4	1622	3	123	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGATGTCTCTTGGT	NA	False	NA	9	True	AATAAA	-23	NA	23898345	23901420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_23898382_23898731_23898796_23900021
ENSMUSG00000023908.9_23945443_23955709_1	chr17	+	1511	8	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_3	138.628412436607	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3071	False	NA	34	True	AAAAAG	-45	NA	23945442	23955709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_23945616_23951310_23951799_23952796_23952890_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ENSMUSG00000023908.9_23945443_23955709_2	chr17	+	1912	8	FSM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	133	-5	0	0	multi-exon	FALSE	canonical	3	384	junction_2	52.6761379583211	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3071	False	NA	34	True	AAAAAG	-45	NA	23945442	23955709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ENSMUSG00000023915.6_43347218_43350846_1	chr17	+	1141	3	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	19759	1227	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_1	55.5	39	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGAACGCTCACAAGCAT	NA	False	NA	NA	False	NA	NA	NA	43347217	43350846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_43347446_43348485_43349138_43350585
ENSMUSG00000023919.9_41234153_41245442_1	chr17	-	1235	9	FSM	ENSMUSG00000023919.10	ENSMUST00000087114.5	1942	9	496	211	496	-211	multi-exon	FALSE	canonical	3	128	junction_2	14.1283181943216	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAACTTAACTGGAGATCT	NA	False	NA	NA	False	NA	NA	NA	41245442	41234152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
ENSMUSG00000023919.9_41236587_41245442_1	chr17	-	1457	7	NIC	ENSMUSG00000023919.10	novel	728	2	NA	NA	496	113	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	58.0631839751605	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTGGTTGAGTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	41245442	41236586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_41237362_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
ENSMUSG00000023919.9_41245576_41272097_1	chr17	-	2892	13	NIC	ENSMUSG00000023919.10	novel	1942	9	NA	NA	-26159	-8876	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGGGGGCGTAGCCAA	NA	False	NA	NA	False	NA	NA	NA	41272097	41245575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ENSMUSG00000023919.9_41245576_41272551_1	chr17	-	3346	13	NIC	ENSMUSG00000023919.10	novel	1942	9	NA	NA	-26613	-8876	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGGGGGCGTAGCCAA	NA	False	NA	NA	False	NA	NA	NA	41272551	41245575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ENSMUSG00000023919.9_41245576_41272881_1	chr17	-	3676	13	NIC	ENSMUSG00000023919.10	novel	1942	9	NA	NA	-26943	-8876	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGGGGGCGTAGCCAA	NA	False	NA	NA	False	NA	NA	NA	41272881	41245575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ENSMUSG00000023931.6_53705917_53769873_1	chr17	-	2185	13	FSM	ENSMUSG00000023931.6	ENSMUST00000024725.5	2661	13	476	0	461	0	multi-exon	TRUE	canonical	2	7	junction_1	9.14998482087387	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTCCTGGTTTTGCTG	NA	False	NA	-4	True	ATTAAA	-14	NA	53769873	53705916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_53706148_53707773_53707956_53708462_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53769458
ENSMUSG00000023932.10_45702810_45744476_1	chr17	-	2839	16	NNC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	-9	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	182.090624567976	2042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAGCCTTTTGTTTGAA	2371	False	NA	-2	True	AATAAA	-20	NA	45744476	45702809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721860_45722749_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ENSMUSG00000023938.9_45817767_45831626_1	chr17	+	3206	22	FSM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	0	143	0	-143	multi-exon	TRUE	canonical	3	146	junction_8	22.4045468336421	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGACTTGGCTCAGTGG	NA	False	NA	5	True	AATAAA	-15	NA	45817766	45831626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ENSMUSG00000023942.16_45896128_45906467_1	chr17	-	2059	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	653.029725575496	2417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906467	45896127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899305_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ENSMUSG00000023942.16_45896128_45906467_2	chr17	-	1966	13	FSM	ENSMUSG00000023942.16	ENSMUST00000051574.13	1996	13	31	-1	0	0	multi-exon	FALSE	canonical	3	154	junction_12	699.864927444337	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906467	45896127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
ENSMUSG00000023942.16_45896128_45906467_3	chr17	-	2067	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1063	junction_5	395.007197897117	2598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906467	45896127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ENSMUSG00000023942.16_45896128_45906467_4	chr17	-	2329	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	50	junction_12	700.728690881751	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906467	45896127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903450_45904257_45904359_45906407
ENSMUSG00000023942.16_45896128_45906467_5	chr17	-	2193	13	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	1453	junction_5	323.049746771126	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906467	45896127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ENSMUSG00000023942.16_45896128_45906467_6	chr17	-	2323	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	50	junction_12	665.039563711645	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906467	45896127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903450_45904257_45904359_45906407
ENSMUSG00000023942.16_45896128_45906467_7	chr17	-	2056	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	677.4512187945	1555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906467	45896127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_45896704_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ENSMUSG00000023942.16_45896128_45906467_8	chr17	-	2199	13	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	1063	junction_5	409.470050458177	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906467	45896127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ENSMUSG00000023942.16_45896128_45910530_1	chr17	-	2133	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_13	645.50828557468	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45910530	45896127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45910398
ENSMUSG00000023944.15_45878701_45884197_1	chr17	-	2511	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	0	0	intron_retention	TRUE	canonical	0	0	junction_2	3270.0116223035	129185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45884197	45878700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_45879051_45879154_45879489_45879792_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ENSMUSG00000023960.14_44389770_44394273_1	chr17	+	1607	3	ISM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	34	3177	0	-3177	5prime_fragment	FALSE	canonical	3	19	junction_2	5.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGGCTGTTTCCTGA	NA	False	NA	8	True	AGTAAA	-26	NA	44389769	44394273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_44389874_44391537_44392402_44393634
ENSMUSG00000023963.11_43978169_44061746_1	chr17	+	2624	12	FSM	ENSMUSG00000023963.11	ENSMUST00000170988.2	3053	12	-147	576	-147	0	multi-exon	FALSE	canonical	3	74	junction_8	14.3492448040404	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCATCTGGTTTTGTGCC	NA	False	NA	4	True	AATAAA	-1	NA	43978168	44061746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_43978686_43987721_43987858_43991014_43991190_43993838_43993989_43996076_43996168_44002524_44002630_44012367_44012459_44036405_44036540_44041862_44041959_44042815_44042905_44057415_44057504_44060794
ENSMUSG00000023967.10_46421921_46439836_2	chr17	+	847	5	NNC	ENSMUSG00000023967.10	novel	884	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	481.572943592142	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTCAGTGCTTAGAA	NA	False	NA	19	True	AATAAA	-19	NA	46421920	46439836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_46422060_46433649_46433758_46436215_46436340_46436568_46436639_46439430
ENSMUSG00000023967.10_46421921_46439836_3	chr17	+	755	6	NNC	ENSMUSG00000023967.10	novel	884	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	441.378114545794	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTCAGTGCTTAGAA	NA	False	NA	19	True	AATAAA	-19	NA	46421920	46439836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568_46436639_46439550
ENSMUSG00000023967.10_46421921_46439836_4	chr17	+	953	6	NNC	ENSMUSG00000023967.10	novel	884	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	438.025296073183	4141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTCAGTGCTTAGAA	NA	False	NA	19	True	AATAAA	-19	NA	46421920	46439836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436418_46436568_46436639_46439430
ENSMUSG00000023967.10_46421921_46439836_5	chr17	+	865	5	NNC	ENSMUSG00000023967.10	novel	884	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	481.572943592142	3543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTCAGTGCTTAGAA	NA	False	NA	19	True	AATAAA	-19	NA	46421920	46439836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_46422078_46433649_46433758_46436215_46436340_46436568_46436639_46439430
ENSMUSG00000023967.10_46421921_46439836_6	chr17	+	868	6	NNC	ENSMUSG00000023967.10	novel	884	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	442.007511248395	4178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTCAGTGCTTAGAA	NA	False	NA	19	True	AATAAA	-19	NA	46421920	46439836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_46422056_46428865_46428898_46433656_46433758_46436215_46436340_46436568_46436639_46439430
ENSMUSG00000023971.10_46978147_46985278_1	chr17	-	1324	8	NNC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	0	237	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	153.326382569461	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGGCCTGTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	46985278	46978146	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_46978168_46978372_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ENSMUSG00000023971.10_46978169_46985232_1	chr17	-	1480	7	NNC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	-19	215	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_6	154.351330844063	20232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTAAGGCATGCACCAG	NA	False	NA	NA	False	NA	NA	NA	46985232	46978168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985103
ENSMUSG00000023971.10_46978169_46985232_2	chr17	-	1461	7	FSM	ENSMUSG00000023971.10	ENSMUST00000233136.2	1289	7	46	-218	-19	215	multi-exon	FALSE	canonical	3	390	junction_2	28.055995596109	20548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTAAGGCATGCACCAG	NA	False	NA	NA	False	NA	NA	NA	46985232	46978168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ENSMUSG00000023971.10_46978384_46985232_1	chr17	-	1241	7	NNC	ENSMUSG00000023971.10	novel	1195	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	163.702643703624	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGGG	NA	False	NA	NA	False	NA	NA	NA	46985232	46978383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_46979008_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ENSMUSG00000023971.10_46978384_46985232_2	chr17	-	1278	7	NNC	ENSMUSG00000023971.10	novel	1195	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	162.60116509081	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGGG	NA	False	NA	NA	False	NA	NA	NA	46985232	46978383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_46979013_46980798_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ENSMUSG00000023973.14_47046966_47063123_1	chr17	-	1556	6	FSM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	17	335	0	-284	multi-exon	FALSE	canonical	3	416	junction_4	48.1730214954387	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGGTTCCTGGGTCCTC	NA	False	NA	-1	True	AGTAAA	-17	NA	47063123	47046965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
ENSMUSG00000023973.14_47057913_47063123_1	chr17	-	783	2	FSM	ENSMUSG00000023973.14	ENSMUST00000148656.2	531	2	-20	-232	0	0	multi-exon	FALSE	canonical	3	518	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGACAGTGTGCTCATA	NA	False	NA	NA	False	NA	NA	NA	47063123	47057912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47058471_47062898
ENSMUSG00000023980.8_47799207_47813212_1	chr17	-	2547	9	FSM	ENSMUSG00000023980.8	ENSMUST00000067103.4	2784	9	5	232	0	0	multi-exon	FALSE	canonical	3	80	junction_1	52.1152568831815	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATAGGGCCTCTCAAAT	NA	False	NA	-4	True	AATAAA	-31	NA	47813212	47799206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47800822_47801067_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ENSMUSG00000023982.9_47705483_47706639_1	chr17	-	524	3	ISM	ENSMUSG00000023982.9	ENSMUST00000059348.9	873	4	4870	0	4870	0	3prime_fragment	FALSE	canonical	3	65	junction_1	4	511	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGAGTCTCAGCTTTTTT	6706	False	NA	0	True	NA	NA	NA	47706639	47705482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_47705746_47706032_47706127_47706472
ENSMUSG00000023987.15_48041701_48045408_1	chr17	+	692	5	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	3934	-1	3932	1	3prime_fragment	FALSE	canonical	3	133	junction_1	119.423615755009	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48041700	48045408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
ENSMUSG00000023987.15_48042274_48045408_1	chr17	+	788	5	NNC	ENSMUSG00000023987.15	novel	1388	9	NA	NA	4505	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	171.057738790152	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48042273	48045408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_48042393_48043309_48043430_48043885_48044037_48044681_48044781_48045109
ENSMUSG00000023987.15_48042393_48045408_1	chr17	+	1262	5	NNC	ENSMUSG00000023987.15	novel	1388	9	NA	NA	4624	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	166.164827806609	1041	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48042392	48045408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_48042986_48043309_48043430_48043885_48044037_48044681_48044781_48045109
ENSMUSG00000023987.15_48042926_48045408_1	chr17	+	729	5	NNC	ENSMUSG00000023987.15	novel	1388	9	NA	NA	5157	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	166.164827806609	967	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48042925	48045408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_48042986_48043309_48043430_48043885_48044037_48044681_48044781_48045109
ENSMUSG00000023987.15_48043567_48045408_1	chr17	+	868	3	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	5800	-1	5798	1	3prime_fragment	FALSE	canonical	3	421	junction_1	1	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48043566	48045408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_48044037_48044681_48044781_48045109
ENSMUSG00000023987.15_48044475_48045408_1	chr17	+	494	3	NNC	ENSMUSG00000023987.15	novel	1388	9	NA	NA	6706	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	200.5	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48044474	48045408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_48044571_48044681_48044781_48045109
ENSMUSG00000023988.9_47904395_47910614_1	chr17	-	1968	5	NNC	ENSMUSG00000023988.9	novel	3854	7	NA	NA	11803	5861	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1882	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTAGCAACCGTGGAATG	3595	False	NA	NA	False	NA	NA	NA	47910614	47904394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_47904778_47905667_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000023988.9_47905238_47910614_1	chr17	-	1687	5	NIC	ENSMUSG00000023988.9	novel	3854	7	NA	NA	11803	5018	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCGAGCCTGCGCCACC	3595	False	NA	NA	False	NA	NA	NA	47910614	47905237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_47905331_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000023988.9_47906993_47910614_1	chr17	-	1526	4	NIC	ENSMUSG00000023988.9	novel	3854	7	NA	NA	11803	3263	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGCAGTCAGGGGCCCC	3595	False	NA	NA	False	NA	NA	NA	47910614	47906992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_47907141_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000023988.9_47908089_47910614_1	chr17	-	1491	4	NNC	ENSMUSG00000023988.9	novel	3854	7	NA	NA	11803	2167	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCTTCGGAAATCTCTT	3595	False	NA	NA	False	NA	NA	NA	47910614	47908088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_47908202_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000023988.9_47911304_47922159_1	chr17	-	2548	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	258	1048	258	-1048	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTTTGGTCTGTTGAGT	2599	False	NA	-1	True	NA	NA	NA	47922159	47911303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
ENSMUSG00000023988.9_47912161_47922159_1	chr17	-	1691	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	258	1905	258	-1905	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTTTTGGTCCCT	2599	False	NA	-2	True	AAAACA	-18	NA	47922159	47912160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
ENSMUSG00000023988.9_47912161_47922417_1	chr17	-	1949	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	0	1905	0	-1905	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTTTTGGTCCCT	2341	False	NA	-2	True	AAAACA	-18	NA	47922417	47912160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
ENSMUSG00000024002.19_32420283_32448623_1	chr17	-	2822	13	ISM	ENSMUSG00000024002.19	ENSMUST00000003726.16	5957	20	54448	5035	-28641	-2839	internal_fragment	FALSE	canonical	3	20	junction_10	65.7904923897738	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTTTGCCGCCTCCACC	NA	False	NA	NA	False	NA	NA	NA	32448623	32420282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443057_32443197_32444549_32444688_32448390
ENSMUSG00000024002.19_32432537_32448623_1	chr17	-	1666	8	ISM	ENSMUSG00000024002.19	ENSMUST00000237692.2	1823	9	54484	0	-28641	0	3prime_fragment	FALSE	canonical	3	185	junction_5	29.7074167884873	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GACAAAGAAAAATAACAGCA	NA	False	NA	87	True	NA	NA	NA	32448623	32432536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390
ENSMUSG00000024002.19_32440391_32448623_1	chr17	-	892	5	ISM	ENSMUSG00000024002.19	ENSMUST00000237692.2	1823	9	54484	7854	-28641	-1256	internal_fragment	FALSE	canonical	3	185	junction_2	32.5758729737209	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGCCAAGCTGGGTCCTC	NA	False	NA	NA	False	NA	NA	NA	32448623	32440390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390
ENSMUSG00000024007.16_29469803_29482923_1	chr17	-	1199	4	FSM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	237	26	-1	0	multi-exon	FALSE	canonical	3	1356	junction_1	125.889722464633	6167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGTGGTCTAGTATTGT	9926	False	NA	-25	True	AATAAA	-22	NA	29482923	29469802	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_29470700_29471223_29471293_29480710_29480866_29482845
ENSMUSG00000024007.16_29469803_29483160_1	chr17	-	1302	4	NNC	ENSMUSG00000024007.16	novel	1462	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	714.950969569864	5682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGTGGTCTAGTATTGT	9689	False	NA	-25	True	AATAAA	-22	NA	29483160	29469802	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_29470700_29471223_29471293_29480710_29480866_29482979
ENSMUSG00000024008.17_29376890_29386472_1	chr17	-	2069	9	NNC	ENSMUSG00000024008.17	novel	2332	12	NA	NA	-7993	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	34	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGACCCCCCCTCTCC	9052	False	NA	-9	True	AGTAAA	-14	NA	29386472	29376889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29386382
ENSMUSG00000024008.17_29376890_29404465_1	chr17	-	2387	13	NNC	ENSMUSG00000024008.17	novel	2332	12	NA	NA	-1388	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_12	27.4969695299925	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGACCCCCCCTCTCC	6736	False	NA	-9	True	AGTAAA	-14	NA	29404465	29376889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29404334
ENSMUSG00000024014.9_29710130_29715086_1	chr17	+	2295	6	FSM	ENSMUSG00000024014.9	ENSMUST00000024811.9	2698	6	403	0	0	0	multi-exon	FALSE	canonical	3	1677	junction_4	112.874443520223	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGTTTTCCATTCATT	NA	False	NA	17	True	AATAAA	-18	NA	29710129	29715086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
ENSMUSG00000024018.19_29923247_29935982_1	chr17	-	491	5	NNC	ENSMUSG00000024018.19	novel	1397	4	NA	NA	0	140	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	140.862299782447	506	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTCCTGCTGACAAGGT	NA	False	NA	-2	True	AATAAA	-27	NA	29935982	29923246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_29923444_29924244_29924298_29924462_29924558_29925652_29925724_29935907
ENSMUSG00000024019.19_29879595_29921661_1	chr17	+	3062	24	FSM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	26	3292	0	415	multi-exon	TRUE	canonical	3	368	junction_15	33.7979652859003	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTTGTTTCTTGTGGT	NA	False	NA	18	True	NA	NA	NA	29879594	29921661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ENSMUSG00000024019.19_29879595_29922333_1	chr17	+	3734	24	FSM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	26	2620	0	0	multi-exon	FALSE	canonical	3	368	junction_15	33.7979652859003	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879594	29922333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ENSMUSG00000024026.14_30811835_30831596_1	chr17	-	1903	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	37	7925	-10	0	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	7855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGGCAGCAAGTCCCT	NA	False	NA	-12	True	AATAAA	-24	NA	30831596	30811834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ENSMUSG00000024026.14_30812485_30831596_1	chr17	-	1253	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	37	8575	-10	355	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	5120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTAACTTTACTTTTCTG	NA	False	NA	NA	False	TATAAA	-18	NA	30831596	30812484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ENSMUSG00000024026.14_30812840_30831596_1	chr17	-	898	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	37	8930	-10	0	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	2940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAACAGCTCCCTTTAGAG	NA	False	NA	NA	False	NA	NA	NA	30831596	30812839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ENSMUSG00000024030.8_31276701_31334751_1	chr17	+	3581	15	FSM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	40	2211	0	1289	multi-exon	FALSE	canonical	3	27	junction_11	5.07947048501744	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTCATTTAATTTCAAG	NA	False	NA	NA	False	ATTAAA	-18	NA	31276700	31334751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_31276831_31283358_31283603_31311282_31311401_31313619_31313753_31317226_31317278_31323010_31323157_31324490_31324615_31325033_31325149_31327279_31327429_31327588_31327691_31328456_31328626_31329930_31330032_31330194_31330354_31331902_31332022_31333030
ENSMUSG00000024033.11_31477087_31477961_1	chr17	-	676	2	NNC	ENSMUSG00000024033.11	novel	1026	8	NA	NA	17974	-3088	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGACATAGACCAGGGTAAG	NA	False	NA	NA	False	NA	NA	NA	31477961	31477086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_31477258_31477456
ENSMUSG00000024037.14_31713296_31731283_1	chr17	-	3712	11	FSM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	442	0	0	0	multi-exon	FALSE	canonical	3	400	junction_7	39.3020355706928	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGTTGTCTCTGTGTCTT	NA	False	NA	0	True	ATTAAA	-23	NA	31731283	31713295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
ENSMUSG00000024037.14_31715096_31731283_2	chr17	-	1912	11	FSM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	442	1800	0	0	multi-exon	FALSE	canonical	3	400	junction_7	39.3020355706928	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGAATGTTCAGCAG	NA	False	NA	-17	True	AATAAA	-17	NA	31731283	31715095	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
ENSMUSG00000024045.7_32523666_32540112_1	chr17	-	2664	14	FSM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	47	1020	-1	0	multi-exon	FALSE	canonical	3	426	junction_6	74.0811964579343	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTTGTTTTTG	NA	False	NA	-9	True	AATAAA	-14	NA	32540112	32523665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ENSMUSG00000024045.7_32529566_32539632_1	chr17	-	1555	11	NIC	ENSMUSG00000024045.7	novel	3731	14	NA	NA	0	3262	combination_of_known_junctions	FALSE	canonical	3	70	junction_10	154.355952266182	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCCATTCAAAGGTAAGT	NA	False	NA	NA	False	NA	NA	NA	32539632	32529565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32539431
ENSMUSG00000024048.16_71301289_71309182_1	chr17	-	932	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	367	638	0	0	multi-exon	FALSE	canonical	3	2551	junction_2	294.524475496803	13356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGTTGTTTAGCGTTA	2294	False	NA	-19	True	ATTAAA	-14	NA	71309182	71301288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
ENSMUSG00000024049.16_71301289_71309873_1	chr17	+	1059	4	NIC	ENSMUSG00000024049.16	novel	2212	8	NA	NA	-8339	-14485	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	4072	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTCCTGCTTGCTCCA	NA	False	NA	NA	False	NA	NA	NA	71301288	71309873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_71301780_71303104_71303267_71303691_71303891_71309666
ENSMUSG00000024053.12_71559169_71563352_1	chr17	-	1279	4	NNC	ENSMUSG00000024053.12	novel	3883	8	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	6.59966329107444	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCCTTTTCTGTATTT	NA	False	NA	-7	True	AATAAA	-15	NA	71563352	71559168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_71560089_71562113_71562243_71562974_71563008_71563155
ENSMUSG00000024056.11_71830142_71833810_1	chr17	-	590	4	ISM	ENSMUSG00000024056.11	ENSMUST00000233750.2	3847	10	-25	14472	-8	1806	5prime_fragment	FALSE	canonical	3	8	junction_1	147.044966667419	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCTTTTAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	71833810	71830141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_71830439_71830576_71830655_71832627_71832738_71833705
ENSMUSG00000024063.14_73225300_73246570_1	chr17	+	697	3	FSM	ENSMUSG00000024063.14	ENSMUST00000024857.14	3069	3	0	2372	0	230	multi-exon	FALSE	canonical	2	4	junction_1	4	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGAGTCGGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	73225299	73246570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_73225574_73228182_73228286_73246250
ENSMUSG00000024069.15_74702616_74730211_1	chr17	+	1130	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	13	1005	0	-450	multi-exon	FALSE	canonical	3	152	junction_5	21.3572043468894	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTAAAGAACGTGGATG	NA	False	NA	NA	False	NA	NA	NA	74702615	74730211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ENSMUSG00000024069.15_74702616_74730662_1	chr17	+	1581	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	13	554	0	0	multi-exon	FALSE	canonical	3	152	junction_5	21.3572043468894	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTGTGGCAGTGAGGT	NA	False	NA	14	True	TATAAA	-17	NA	74702615	74730662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ENSMUSG00000024069.15_74702616_74731004_1	chr17	+	1923	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	13	212	0	0	multi-exon	FALSE	canonical	3	152	junction_5	21.3572043468894	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAGGTATATTCTACT	NA	False	NA	9	True	AATAAA	-22	NA	74702615	74731004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ENSMUSG00000024070.16_79278984_79328261_1	chr17	-	2236	9	NIC	ENSMUSG00000024070.16	novel	1265	7	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	42.4941172399192	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGAGGTGTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	79328261	79278983	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ENSMUSG00000024078.8_75024757_75170565_1	chr17	+	2709	21	NNC	ENSMUSG00000024078.8	novel	2838	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.5724964966845	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGTGATGTTCTCA	NA	False	NA	10	True	AATAAA	-21	NA	75024756	75170565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_75024784_75024882_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
ENSMUSG00000024081.10_79221746_79227735_1	chr17	-	684	5	NNC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	2535	4689	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACCATCACCAGTTAGG	NA	False	NA	NA	False	NA	NA	NA	79227735	79221745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_79221854_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ENSMUSG00000024081.10_79224129_79227735_1	chr17	-	937	5	NIC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	2535	2306	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTACCCGGGGTCCTGGTC	NA	False	NA	NA	False	GGGGCT	-35	NA	79227735	79224128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_79224490_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ENSMUSG00000024081.10_79225784_79227735_1	chr17	-	553	3	NNC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	2535	651	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTAACAACATGGATGGA	NA	False	NA	NA	False	TTTAAA	-40	NA	79227735	79225783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_79225922_79227187_79227273_79227405
ENSMUSG00000024081.10_79227274_79244481_1	chr17	-	3217	16	FSM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	14	839	-11	0	multi-exon	FALSE	canonical	3	465	junction_13	57.736720454914	2340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTAGTTTTTGCTAGTCA	NA	False	NA	-6	True	AATAAA	-16	NA	79244481	79227273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ENSMUSG00000024082.6_79244565_79254602_2	chr17	+	1423	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	0	326	0	0	multi-exon	FALSE	canonical	3	388	junction_6	40.441391826191	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCAAACTAGTATCTCT	NA	False	NA	24	True	AATAAA	-33	NA	79244564	79254602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
ENSMUSG00000024082.6_79244565_79254602_3	chr17	+	1398	10	NNC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	138.577250373168	1062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCAAACTAGTATCTCT	NA	False	NA	24	True	AATAAA	-33	NA	79244564	79254602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_79244606_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
ENSMUSG00000024082.6_79244565_79255361_1	chr17	+	1284	10	NIC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	142.310909847869	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCTGTACCAAATCTG	NA	False	NA	NA	False	AATAAA	-13	NA	79244564	79255361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79255201
ENSMUSG00000024091.10_65887048_65920310_1	chr17	-	1403	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	240	1726	240	367	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTTGTGTCTGTCATG	3203	False	NA	-5	True	AATAAA	-26	NA	65920310	65887047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ENSMUSG00000024091.10_65887415_65920310_1	chr17	-	1036	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	240	2093	240	0	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTTATGAAATTCATAAAT	3203	False	NA	NA	False	NA	NA	NA	65920310	65887414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ENSMUSG00000024097.12_80507509_80514732_1	chr17	-	2253	8	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	229	junction_3	678.209978922608	4269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514732	80507508	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUSG00000024097.12_80507509_80514732_2	chr17	-	2277	8	FSM	ENSMUSG00000024097.12	ENSMUST00000235069.2	1040	8	0	-1237	0	0	multi-exon	FALSE	canonical	3	1059	junction_3	412.241508371597	6396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514732	80507508	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUSG00000024097.12_80508739_80514732_1	chr17	-	1023	8	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	229	junction_3	678.209978922608	2647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514732	80508738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUSG00000024097.12_80508739_80514732_2	chr17	-	3307	6	NIC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1956	junction_1	145.974792344432	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514732	80508738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80512868_80513276_80513458_80514603
ENSMUSG00000024099.16_66386212_66408490_1	chr17	-	1054	8	FSM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	64	579	0	224	multi-exon	FALSE	canonical	3	4006	junction_3	144.496027768297	12494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTTCCTTTGTATCT	5516	False	NA	NA	False	AGTAAA	-20	NA	66408490	66386211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
ENSMUSG00000024099.16_66386436_66408490_1	chr17	-	825	8	NNC	ENSMUSG00000024099.16	novel	927	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1458.2637145676	3851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAGCTTTATTCGGTTT	5516	False	NA	-11	True	AATAAA	-15	NA	66408490	66386435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396484_66398858_66398925_66408409
ENSMUSG00000024099.16_66386436_66408490_2	chr17	-	833	8	NNC	ENSMUSG00000024099.16	novel	927	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1479.79761440267	6916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAGCTTTATTCGGTTT	5516	False	NA	-11	True	AATAAA	-15	NA	66408490	66386435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_66386580_66387799_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
ENSMUSG00000024099.16_66386436_66408490_3	chr17	-	829	8	NNC	ENSMUSG00000024099.16	novel	927	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1458.2637145676	6547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAGCTTTATTCGGTTT	5516	False	NA	-11	True	AATAAA	-15	NA	66408490	66386435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396484_66398854_66398925_66408409
ENSMUSG00000024099.16_66386436_66408490_4	chr17	-	825	8	NNC	ENSMUSG00000024099.16	novel	927	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1462.53936280536	7889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAGCTTTATTCGGTTT	5516	False	NA	-11	True	AATAAA	-15	NA	66408490	66386435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398920_66408409
ENSMUSG00000024101.16_66418548_66426442_1	chr17	+	1841	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	8	1056	0	0	multi-exon	FALSE	canonical	3	38	junction_1	29.1082462542833	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGGAGCTGTCCTTTT	NA	False	NA	24	True	AATAAA	-32	NA	66418547	66426442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ENSMUSG00000024101.16_66418640_66426443_1	chr17	+	1750	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	100	1055	0	1	multi-exon	FALSE	canonical	3	38	junction_1	29.1082462542833	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGAGCTGTCCTTTTT	NA	False	NA	25	True	AATAAA	-33	NA	66418639	66426443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ENSMUSG00000024104.12_116185056_116239350_1	chr6	+	3953	31	FSM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	57	297	0	-276	multi-exon	FALSE	canonical	3	196	junction_27	51.0355975983648	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAGGCAGCATCTGAAC	NA	False	NA	NA	False	NA	NA	NA	116185055	116239350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ENSMUSG00000024104.12_116185056_116239350_2	chr6	+	3890	30	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	-276	combination_of_known_splicesites	FALSE	canonical	3	101	junction_26	58.2477793996823	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAGGCAGCATCTGAAC	NA	False	NA	NA	False	NA	NA	NA	116185055	116239350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ENSMUSG00000024104.12_116185056_116239626_1	chr6	+	4166	30	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	101	junction_26	58.2477793996823	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116185055	116239626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ENSMUSG00000024104.12_116237507_116239626_1	chr6	+	454	2	ISM	ENSMUSG00000024104.12	ENSMUST00000203802.3	4946	28	52340	0	3990	0	3prime_fragment	FALSE	canonical	3	377	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116237506	116239626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_116237630_116239295
ENSMUSG00000024118.15_24434213_24439764_2	chr17	-	1981	10	FSM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	0	185	0	0	multi-exon	FALSE	canonical	3	183	junction_7	23.2426810463471	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGGCTTGACGGTTAA	3337	False	NA	0	True	AATAAA	-21	NA	24439764	24434212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
ENSMUSG00000024118.15_24434520_24439764_3	chr17	-	1674	10	FSM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	0	492	0	0	multi-exon	FALSE	canonical	3	183	junction_7	23.2426810463471	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTTGGTTTCTTGTTTC	3337	False	NA	-7	True	TTTAAA	-28	NA	24439764	24434519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
ENSMUSG00000024121.14_24382840_24399669_1	chr17	-	1208	4	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	1183	3	NA	NA	460	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1264.20963451478	11475	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTGTGTTCTGGCGC	NA	False	NA	NA	False	AATAAA	-15	NA	24399669	24382839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388411_24399619
ENSMUSG00000024121.14_24382840_24399669_10	chr17	-	1213	4	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	1183	3	NA	NA	460	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1264.20963451478	11844	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTGTGTTCTGGCGC	NA	False	NA	NA	False	AATAAA	-15	NA	24399669	24382839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388416_24399619
ENSMUSG00000024121.14_24382840_24399669_2	chr17	-	1226	4	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	1183	3	NA	NA	460	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1264.20963451478	11753	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTGTGTTCTGGCGC	NA	False	NA	NA	False	AATAAA	-15	NA	24399669	24382839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388415_24399605
ENSMUSG00000024121.14_24382840_24399669_3	chr17	-	1239	4	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	1183	3	NA	NA	460	0	multi-exon	FALSE	canonical	0	0	junction_3	1264.20963451478	12683	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTGTGTTCTGGCGC	NA	False	NA	NA	False	AATAAA	-15	NA	24399669	24382839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388428_24399605
ENSMUSG00000024121.14_24382840_24399669_4	chr17	-	1202	4	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	1183	3	NA	NA	460	0	multi-exon	FALSE	canonical	0	0	junction_3	1264.20963451478	8259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTGTGTTCTGGCGC	NA	False	NA	NA	False	AATAAA	-15	NA	24399669	24382839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388391_24399605
ENSMUSG00000024121.14_24382840_24399669_5	chr17	-	1181	4	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	1183	3	NA	NA	460	0	multi-exon	FALSE	canonical	0	0	junction_3	1264.20963451478	7032	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTGTGTTCTGGCGC	NA	False	NA	NA	False	AATAAA	-15	NA	24399669	24382839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388384_24399619
ENSMUSG00000024121.14_24382840_24399669_6	chr17	-	1225	4	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	1183	3	NA	NA	460	0	multi-exon	FALSE	canonical	0	0	junction_3	1264.20963451478	12497	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTGTGTTCTGGCGC	NA	False	NA	NA	False	AATAAA	-15	NA	24399669	24382839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388428_24399619
ENSMUSG00000024121.14_24382840_24399669_7	chr17	-	1212	4	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	1183	3	NA	NA	460	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1264.20963451478	11610	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTGTGTTCTGGCGC	NA	False	NA	NA	False	AATAAA	-15	NA	24399669	24382839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388415_24399619
ENSMUSG00000024121.14_24382840_24399669_8	chr17	-	1240	4	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	1183	3	NA	NA	460	0	multi-exon	FALSE	canonical	0	0	junction_3	1264.20963451478	12760	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTGTGTTCTGGCGC	NA	False	NA	NA	False	AATAAA	-15	NA	24399669	24382839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388443_24399619
ENSMUSG00000024121.14_24382840_24399669_9	chr17	-	1188	4	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	1183	3	NA	NA	460	0	multi-exon	FALSE	canonical	0	0	junction_3	1264.20963451478	7414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTGTGTTCTGGCGC	NA	False	NA	NA	False	AATAAA	-15	NA	24399669	24382839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388391_24399619
ENSMUSG00000024121.14_24383127_24399669_1	chr17	-	901	4	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	796	4	NA	NA	460	0	multi-exon	FALSE	canonical	0	0	junction_3	1264.20963451478	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTAGAGTGCTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	24399669	24383126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388391_24399619
ENSMUSG00000024121.14_24383127_24399669_2	chr17	-	921	4	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	796	4	NA	NA	460	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1264.20963451478	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTAGAGTGCTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	24399669	24383126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388411_24399619
ENSMUSG00000024121.14_24383127_24399669_4	chr17	-	894	4	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	796	4	NA	NA	460	0	multi-exon	FALSE	canonical	0	0	junction_3	1264.20963451478	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTAGAGTGCTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	24399669	24383126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388384_24399619
ENSMUSG00000024121.14_24383127_24399669_5	chr17	-	926	4	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	796	4	NA	NA	460	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1264.20963451478	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTAGAGTGCTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	24399669	24383126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388416_24399619
ENSMUSG00000024121.14_24383127_24399669_6	chr17	-	938	4	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	796	4	NA	NA	460	0	multi-exon	FALSE	canonical	0	0	junction_3	1264.20963451478	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTAGAGTGCTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	24399669	24383126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388428_24399619
ENSMUSG00000024121.14_24383127_24399669_7	chr17	-	925	4	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	796	4	NA	NA	460	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1264.20963451478	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTAGAGTGCTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	24399669	24383126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388415_24399619
ENSMUSG00000024122.17_24296605_24360527_1	chr17	-	3168	14	FSM	ENSMUSG00000024122.17	ENSMUST00000102927.10	7161	14	42	3951	0	1250	multi-exon	FALSE	canonical	3	123	junction_7	13.9033008723802	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACAACAACAGAGGTTA	NA	False	NA	NA	False	NA	NA	NA	24360527	24296604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
ENSMUSG00000024127.16_85371957_85397669_1	chr17	-	2216	14	FSM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	-20	1059	0	0	multi-exon	FALSE	canonical	3	23	junction_13	48.4489605166915	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	False	NA	-2	True	TTTAAA	-5	NA	85397669	85371956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
ENSMUSG00000024127.16_85385487_85397669_1	chr17	-	1099	5	ISM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	-20	14589	0	0	5prime_fragment	FALSE	canonical	3	23	junction_4	71.3249605678124	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTTAAAAAAAAAATGTG	NA	False	NA	NA	False	AATAAA	-38	NA	85397669	85385486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
ENSMUSG00000024132.7_24645657_24658211_1	chr17	+	935	7	NNC	ENSMUSG00000024132.7	novel	1137	7	NA	NA	0	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	205.38635679021	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACAGCTGCCACATATGT	4882	False	NA	11	True	NA	NA	NA	24645656	24658211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_24645679_24645865_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ENSMUSG00000024132.7_24645657_24658211_2	chr17	+	1122	6	NIC	ENSMUSG00000024132.7	novel	1137	7	NA	NA	0	17	intron_retention	FALSE	canonical	3	503	junction_1	25.350345165303	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACAGCTGCCACATATGT	4882	False	NA	11	True	NA	NA	NA	24645656	24658211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ENSMUSG00000024140.11_87061128_87138843_1	chr17	+	3521	16	FSM	ENSMUSG00000024140.11	ENSMUST00000024954.11	5516	16	0	1995	0	-1995	multi-exon	FALSE	canonical	3	64	junction_3	13.5078577954545	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTCTCTCATTCATAT	NA	False	NA	NA	False	NA	NA	NA	87061127	87138843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378
ENSMUSG00000024140.11_87061556_87138843_1	chr17	+	3093	16	FSM	ENSMUSG00000024140.11	ENSMUST00000024954.11	5516	16	428	1995	428	-1995	multi-exon	FALSE	canonical	3	64	junction_3	13.5078577954545	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTCTCTCATTCATAT	NA	False	NA	NA	False	NA	NA	NA	87061555	87138843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378
ENSMUSG00000024142.16_24694276_24698022_2	chr17	-	1579	9	FSM	ENSMUSG00000024142.16	ENSMUST00000070888.14	3358	9	30	1749	-1	0	multi-exon	FALSE	canonical	3	60	junction_8	10.0374299499424	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGTTGCTCGGGAAGC	9617	False	NA	NA	False	AATAAA	-14	NA	24698022	24694275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
ENSMUSG00000024143.16_87304684_87332834_1	chr17	+	981	6	NNC	ENSMUSG00000024143.16	novel	4151	5	NA	NA	2661	25337	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1789	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGGGAACTCACAAGCGCA	NA	False	NA	NA	False	NA	NA	NA	87304683	87332834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_87304996_87316237_87316340_87327828_87327946_87329286_87329379_87331092_87331342_87332725
ENSMUSG00000024143.16_87304684_87332834_2	chr17	+	879	5	NIC	ENSMUSG00000024143.16	novel	4151	5	NA	NA	2661	25337	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGGGAACTCACAAGCGCA	NA	False	NA	NA	False	NA	NA	NA	87304683	87332834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_87304996_87327828_87327946_87329286_87329379_87331092_87331342_87332725
ENSMUSG00000024143.16_87304684_87332834_3	chr17	+	899	6	NNC	ENSMUSG00000024143.16	novel	4151	5	NA	NA	2661	25337	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	586	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGGGAACTCACAAGCGCA	NA	False	NA	NA	False	NA	NA	NA	87304683	87332834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_87304996_87316230_87316340_87327828_87327946_87329286_87329379_87331092_87331253_87332725
ENSMUSG00000024145.7_87304684_87331341_1	chr17	-	879	5	ISM	ENSMUSG00000024145.7	ENSMUST00000024957.7	988	6	1493	0	1493	0	3prime_fragment	FALSE	canonical	3	302	junction_2	26.5741886047345	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGTT	691	False	NA	-12	True	AATAAA	-15	NA	87331341	87304683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_87304996_87316230_87316340_87327828_87327946_87329286_87329379_87331092
ENSMUSG00000024146.10_87332978_87342730_1	chr17	+	676	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	0	508	0	-170	multi-exon	FALSE	canonical	3	592	junction_4	35.4427355039083	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTGTTCCTGACTTCTG	NA	False	NA	13	True	AATGAA	-1	NA	87332977	87342730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
ENSMUSG00000024146.10_87333039_87342673_1	chr17	+	558	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	61	565	0	-227	multi-exon	FALSE	canonical	3	592	junction_4	35.4427355039083	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGTTTTCCTTGTGAG	NA	False	NA	17	True	NA	NA	NA	87333038	87342673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
ENSMUSG00000024150.13_87562086_87573323_1	chr17	-	1783	4	FSM	ENSMUSG00000024150.13	ENSMUST00000024963.11	2038	4	40	215	0	0	multi-exon	FALSE	canonical	3	165	junction_3	69.8108555710038	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGACGTTGACTC	NA	False	NA	-2	True	AATAAA	-17	NA	87573323	87562085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87573262
ENSMUSG00000024150.13_87562086_87573323_2	chr17	-	1735	4	NNC	ENSMUSG00000024150.13	novel	2017	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	147.196769288218	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGACGTTGACTC	NA	False	NA	-2	True	AATAAA	-17	NA	87573323	87562085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_87563486_87564574_87564735_87565355_87565518_87573310
ENSMUSG00000024150.13_87562086_87573323_3	chr17	-	1779	4	NNC	ENSMUSG00000024150.13	novel	2017	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	122.284731489894	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGACGTTGACTC	NA	False	NA	-2	True	AATAAA	-17	NA	87573323	87562085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_87563478_87564570_87564735_87565355_87565518_87573262
ENSMUSG00000024151.14_87979989_88031141_1	chr17	+	3052	16	FSM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	231	0	0	0	multi-exon	FALSE	canonical	3	1624	junction_8	132.693531618287	2709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4892	False	NA	19	True	AATAAA	-16	NA	87979988	88031141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ENSMUSG00000024158.18_25069550_25083424_1	chr17	+	1100	9	NNC	ENSMUSG00000024158.18	novel	1191	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	127.920324323385	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTTATGGACTCTTT	NA	False	NA	11	True	AAAAAG	-24	NA	25069549	25083424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082726_25083166
ENSMUSG00000024158.18_25069641_25083424_1	chr17	+	1014	9	FSM	ENSMUSG00000024158.18	ENSMUST00000118788.8	1191	9	177	0	0	0	multi-exon	FALSE	canonical	3	330	junction_6	27.6812210713328	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTTATGGACTCTTT	NA	False	NA	11	True	AAAAAG	-24	NA	25069640	25083424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
ENSMUSG00000024160.17_25105834_25111116_1	chr17	+	1762	7	FSM	ENSMUSG00000024160.17	ENSMUST00000120943.8	1949	7	180	7	101	5	multi-exon	FALSE	canonical	3	47	junction_1	56.1921307262463	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAAGCTGCCTGTGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	25105833	25111116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25106080_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ENSMUSG00000024163.18_25114090_25115263_1	chr17	-	1091	2	NIC	ENSMUSG00000024163.18	novel	7278	42	NA	NA	3428	2390	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1019	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGCGGCCGGTGTCCTGA	662	False	NA	NA	False	NA	NA	NA	25115263	25114089	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_25114679_25114761
ENSMUSG00000024163.18_25114109_25115263_1	chr17	-	856	2	NIC	ENSMUSG00000024163.18	novel	7278	42	NA	NA	3428	2371	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGAGCTCTCCCGTTCCG	662	False	NA	NA	False	NA	NA	NA	25115263	25114108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_25114463_25114761
ENSMUSG00000024163.18_25115479_25116476_2	chr17	-	690	5	NIC	ENSMUSG00000024163.18	novel	7278	42	NA	NA	2215	1001	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCGGGCCAAGCGGCAA	NA	False	NA	NA	False	NA	NA	NA	25116476	25115478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_25115534_25115601_25115733_25115825_25115928_25116001_25116115_25116187
ENSMUSG00000024163.18_25115497_25116476_1	chr17	-	740	4	NIC	ENSMUSG00000024163.18	novel	7278	42	NA	NA	2215	983	intron_retention	FALSE	non_canonical	0	0	junction_1	0	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATCATGGCGGCGGATG	NA	False	NA	NA	False	NA	NA	NA	25116476	25115496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_25115733_25115825_25115928_25116001_25116115_25116187
ENSMUSG00000024165.10_25161127_25179621_1	chr17	-	2947	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	42	-317	-2	317	multi-exon	TRUE	canonical	3	1697	junction_3	70.6872513258225	3198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCCTGTGTGTATTTTG	4815	False	NA	-5	True	ATTAAA	-14	NA	25179621	25161126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ENSMUSG00000024165.10_25161807_25179621_1	chr17	-	2267	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	42	363	-2	-363	multi-exon	FALSE	canonical	3	1697	junction_3	70.6872513258225	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAGCTTATAAGGAAA	4815	False	NA	NA	False	CATAAA	-33	NA	25179621	25161806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ENSMUSG00000024174.10_55976746_56019607_1	chr17	-	1349	11	ISM	ENSMUSG00000024174.10	ENSMUST00000233972.2	2185	16	17	15163	0	-15163	5prime_fragment	FALSE	canonical	2	2	junction_1	8.05232885567896	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGTAAGTATTTTCTA	NA	False	NA	NA	False	NA	NA	NA	56019607	55976745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_55976897_55979830_55979894_55981051_55981141_55994788_55994959_55999721_55999878_56002026_56002318_56005456_56005588_56006991_56007107_56013105_56013153_56017838_56017907_56019539
ENSMUSG00000024177.10_26310710_26314447_1	chr17	-	1004	4	NIC	ENSMUSG00000024177.10	novel	926	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	304	junction_1	22.7596133534821	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTCTACTTACTAGTTC	NA	False	NA	-2	True	ATTAAA	-20	NA	26314447	26310709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_26311127_26312590_26312935_26313110_26313245_26314338
ENSMUSG00000024177.10_26310710_26314447_2	chr17	-	875	5	FSM	ENSMUSG00000024177.10	ENSMUST00000025007.7	1006	5	129	2	0	0	multi-exon	FALSE	canonical	3	296	junction_2	23.847169643377	2220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTCTACTTACTAGTTC	NA	False	NA	-2	True	ATTAAA	-20	NA	26314447	26310709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26311127_26312590_26312704_26312832_26312935_26313110_26313245_26314338
ENSMUSG00000024177.10_26310710_26314447_3	chr17	-	868	5	NNC	ENSMUSG00000024177.10	novel	926	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	132.902925099488	2150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTCTACTTACTAGTTC	NA	False	NA	-2	True	ATTAAA	-20	NA	26314447	26310709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_26311127_26312590_26312704_26312832_26312928_26313110_26313245_26314338
ENSMUSG00000024177.10_26310710_26314447_4	chr17	-	773	4	NIC	ENSMUSG00000024177.10	novel	926	6	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	6	junction_2	144.144217905387	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTCTACTTACTAGTTC	NA	False	NA	-2	True	ATTAAA	-20	NA	26314447	26310709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_26311127_26312590_26312704_26313110_26313245_26314338
ENSMUSG00000024181.10_26342518_26345587_1	chr17	+	1012	5	NIC	ENSMUSG00000024181.10	novel	1002	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	661.773138998554	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342517	26345587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_26342824_26343529_26343693_26344230_26344366_26344473_26344539_26345244
ENSMUSG00000024181.10_26342518_26345587_2	chr17	+	1572	4	NIC	ENSMUSG00000024181.10	novel	1068	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1395	junction_2	20.2703943940144	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342517	26345587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_26342824_26343529_26344366_26344451_26344539_26345244
ENSMUSG00000024181.10_26342518_26345587_3	chr17	+	1034	5	NIC	ENSMUSG00000024181.10	novel	1068	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	597.959603568669	3443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342517	26345587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_26342824_26343529_26343693_26344230_26344366_26344451_26344539_26345244
ENSMUSG00000024187.16_26431665_26463147_1	chr17	-	2793	13	NIC	ENSMUSG00000024187.16	novel	2833	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	64.7081052797012	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGATGTCTTTCTG	1969	False	NA	2	True	NA	NA	NA	26463147	26431664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_26432692_26432777_26432881_26433319_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
ENSMUSG00000024187.16_26431665_26463147_2	chr17	-	2795	13	FSM	ENSMUSG00000024187.16	ENSMUST00000114988.8	3714	13	50	869	-5	0	multi-exon	FALSE	canonical	3	154	junction_12	26.8089951736767	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGATGTCTTTCTG	1969	False	NA	2	True	NA	NA	NA	26463147	26431664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462979
ENSMUSG00000024188.17_26471940_26477148_1	chr17	+	541	4	ISM	ENSMUSG00000024188.17	ENSMUST00000148894.2	1672	10	-33	22549	0	-8219	5prime_fragment	FALSE	canonical	3	95	junction_2	191.701735922123	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGCTGTATTGAGTTT	NA	False	NA	NA	False	AATACA	-18	NA	26471939	26477148	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899
ENSMUSG00000024190.8_26724564_26726097_1	chr17	-	1200	2	ISM	ENSMUSG00000024190.8	ENSMUST00000236661.2	1587	4	1349	-1	600	0	3prime_fragment	FALSE	canonical	3	520	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCGTGCTTTCTTTGGT	NA	False	NA	0	True	AATAAA	-20	NA	26726097	26724563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_26725625_26725958
ENSMUSG00000024194.17_27156950_27158450_1	chr17	-	676	7	NIC	ENSMUSG00000024194.17	novel	741	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	363.746554011932	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGCCTTTTCTCTGTGA	9345	False	NA	-21	True	AATAAA	-14	NA	27158450	27156949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_27157151_27157391_27157442_27157545_27157624_27157700_27157761_27157857_27158067_27158290_27158343_27158424
ENSMUSG00000024194.17_27156950_27158450_2	chr17	-	753	6	NIC	ENSMUSG00000024194.17	novel	741	7	NA	NA	-12	0	intron_retention	FALSE	canonical	3	300	junction_5	273.070979783645	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGCCTTTTCTCTGTGA	9345	False	NA	-21	True	AATAAA	-14	NA	27158450	27156949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857_27158067_27158290_27158343_27158424
ENSMUSG00000024194.17_27156950_27158450_3	chr17	-	701	5	NIC	ENSMUSG00000024194.17	novel	662	6	NA	NA	-12	0	intron_retention	FALSE	canonical	3	227	junction_4	311.485954739536	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGCCTTTTCTCTGTGA	9345	False	NA	-21	True	AATAAA	-14	NA	27158450	27156949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857_27158067_27158424
ENSMUSG00000024194.17_27156950_27158450_4	chr17	-	726	6	ISM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	93	4	-12	0	intron_retention	FALSE	canonical	3	511	junction_5	169.834507683215	3243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGCCTTTTCTCTGTGA	9345	False	NA	-21	True	AATAAA	-14	NA	27158450	27156949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290
ENSMUSG00000024194.17_27156950_27158450_5	chr17	-	639	7	NNC	ENSMUSG00000024194.17	novel	741	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_4	311.411838781594	2091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGCCTTTTCTCTGTGA	9345	False	NA	-21	True	AATAAA	-14	NA	27158450	27156949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157756_27157857_27158067_27158290_27158343_27158424
ENSMUSG00000024194.17_27156950_27158450_6	chr17	-	950	5	ISM	ENSMUSG00000024194.17	ENSMUST00000236326.2	937	6	69	0	-12	0	intron_retention	FALSE	canonical	3	797	junction_3	67.913547985656	2272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGCCTTTTCTCTGTGA	9345	False	NA	-21	True	AATAAA	-14	NA	27158450	27156949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857
ENSMUSG00000024197.11_56585966_56597511_1	chr17	-	2155	8	FSM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	0	1490	0	-1490	multi-exon	TRUE	canonical	3	548	junction_7	40.8821102534533	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAGTGGATGGTGTATA	NA	False	NA	-9	True	AATAAA	-17	NA	56597511	56585965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
ENSMUSG00000024197.11_56586480_56597511_1	chr17	-	1641	8	FSM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	0	2004	0	-2004	multi-exon	FALSE	canonical	3	548	junction_7	40.8821102534533	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTAGTCTGTCATCCTGT	NA	False	NA	NA	False	AATGAA	-9	NA	56597511	56586479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
ENSMUSG00000024208.17_27341787_27352876_1	chr17	-	336	4	FSM	ENSMUSG00000024208.17	ENSMUST00000025045.15	500	4	14	150	0	-143	multi-exon	FALSE	canonical	3	2713	junction_1	153.559977424675	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGCATGTGGAAGAAAC	1961	False	NA	NA	False	NA	NA	NA	27352876	27341786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27341815_27344120_27344191_27344857_27344933_27352713
ENSMUSG00000024209.10_57184231_57195906_1	chr17	+	2298	12	ISM	ENSMUSG00000024209.10	ENSMUST00000025048.7	2677	14	1754	-2	1728	2	3prime_fragment	TRUE	canonical	3	15	junction_6	15.5260378474249	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCGCACCCCGAGGTAA	NA	False	NA	18	True	ATTAAA	-18	NA	57184230	57195906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440_57193688_57195636
ENSMUSG00000024209.10_57190976_57195906_1	chr17	+	925	5	NNC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	8473	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	26.0192236625154	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCGCACCCCGAGGTAA	NA	False	NA	18	True	ATTAAA	-18	NA	57190975	57195906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_57191026_57191750_57191969_57192083_57192224_57193440_57193688_57195636
ENSMUSG00000024218.14_28120100_28126698_1	chr17	-	1201	6	NNC	ENSMUSG00000024218.14	novel	3457	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	54	junction_1	40	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGGGTTTCTCTGTGTTG	NA	False	NA	-7	True	AATAAA	-21	NA	28126698	28120099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_28120278_28120298_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
ENSMUSG00000024218.14_28120100_28126739_1	chr17	-	1242	6	NNC	ENSMUSG00000024218.14	novel	3457	6	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	54	junction_1	40	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGGGTTTCTCTGTGTTG	NA	False	NA	-7	True	AATAAA	-21	NA	28126739	28120099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_28120278_28120298_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
ENSMUSG00000024222.18_28618068_28637488_1	chr17	-	2936	7	NIC	ENSMUSG00000024222.18	novel	3543	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_6	192.900377282046	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCATGGCTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28637488	28618067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28637368
ENSMUSG00000024231.16_3383257_3435404_1	chr18	+	2830	21	FSM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	25	973	0	19	multi-exon	FALSE	canonical	3	782	junction_1	80.8420682565705	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAATGCCTTTTTCT	13	True	NA	91	True	NA	NA	NA	3383256	3435404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ENSMUSG00000024232.3_3508172_3512752_1	chr18	+	1173	3	FSM	ENSMUSG00000024232.3	ENSMUST00000025075.3	5074	3	249	3652	249	-3652	multi-exon	FALSE	canonical	3	117	junction_2	19.5	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATTTAGTGGTGTCTTT	163	False	NA	19	True	AATATA	-14	NA	3508171	3512752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_3508286_3511256_3511545_3511981
ENSMUSG00000024234.8_4375603_4396785_1	chr18	+	2076	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234422.2	2626	9	7	543	0	0	multi-exon	FALSE	canonical	3	50	junction_2	58.5340445809103	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTAGTATCTATTTTCT	-1	True	NA	18	True	AATAAA	-20	NA	4375602	4396785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_4375779_4379568_4379742_4380672_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUSG00000024251.11_84751435_84773638_1	chr17	-	1679	11	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-5	-635	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_10	13.186735759846	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCAATACCTGGATGGAC	NA	False	NA	NA	False	TTTAAA	-32	NA	84773638	84751434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773521
ENSMUSG00000024251.11_84751435_84773638_2	chr17	-	1726	11	ISM	ENSMUSG00000024251.11	ENSMUST00000047524.10	7784	38	-94	253931	-5	-635	5prime_fragment	FALSE	canonical	2	39	junction_4	10.2156742312977	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCAATACCTGGATGGAC	NA	False	NA	NA	False	TTTAAA	-32	NA	84773638	84751434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
ENSMUSG00000024258.5_31922212_31929759_1	chr18	+	924	3	FSM	ENSMUSG00000024258.5	ENSMUST00000234146.2	706	3	-1	-217	0	5	multi-exon	FALSE	canonical	3	63	junction_2	315.5	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTATTTATTTGTTAA	NA	False	NA	26	True	AATAAA	-25	NA	31922211	31929759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_31922298_31924892_31925074_31929102
ENSMUSG00000024258.5_31922212_31929759_2	chr18	+	494	3	NNC	ENSMUSG00000024258.5	novel	1015	4	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	347	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTATTTATTTGTTAA	NA	False	NA	26	True	AATAAA	-25	NA	31922211	31929759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_31922298_31924892_31925064_31929522
ENSMUSG00000024259.10_31714642_31742958_1	chr18	-	2953	8	FSM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	-3	1421	-3	-1421	multi-exon	FALSE	canonical	3	132	junction_7	28.1852472628023	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATTTTATGGTTAAT	NA	False	NA	-17	True	AATAAA	-15	NA	31742958	31714641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
ENSMUSG00000024260.15_31767436_31813445_1	chr18	+	1614	13	ISM	ENSMUSG00000024260.15	ENSMUST00000025109.8	4015	21	0	42669	0	-32622	5prime_fragment	FALSE	canonical	3	116	junction_5	27.8521642885352	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCACAGCTCAAACTGGT	6817	False	NA	NA	False	NA	NA	NA	31767435	31813445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421
ENSMUSG00000024260.15_31768138_31813445_1	chr18	+	1558	13	NIC	ENSMUSG00000024260.15	novel	400	3	NA	NA	0	-32622	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	59.4187119797571	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCACAGCTCAAACTGGT	7519	False	NA	NA	False	NA	NA	NA	31768137	31813445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_31768185_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783673_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421
ENSMUSG00000024260.15_31813419_31856116_1	chr18	+	2433	9	ISM	ENSMUSG00000024260.15	ENSMUST00000235017.2	4030	21	45995	-2	45187	2	3prime_fragment	FALSE	canonical	3	64	junction_1	37.7946755509291	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCAGTTTGCCTCTTT	9316	False	NA	10	True	AATAAA	-22	NA	31813418	31856116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_+_31813725_31815059_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ENSMUSG00000024268.17_25612135_25638126_1	chr18	-	1739	10	ISM	ENSMUSG00000024268.17	ENSMUST00000223704.2	2492	13	248914	0	-3830	0	3prime_fragment	FALSE	canonical	2	4	junction_2	10.3064165558269	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAACAAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25638126	25612134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_-_25612769_25619850_25620023_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
ENSMUSG00000024271.9_24737020_24771867_1	chr18	+	2525	20	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_19	197.717782026908	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24737019	24771867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24771450
ENSMUSG00000024271.9_24737020_24771869_1	chr18	+	2763	22	NNC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	2	87	junction_5	179.08434273844	1377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGATTTTGCCTTA	NA	False	NA	92	True	TTTAAA	-12	NA	24737019	24771869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747478_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ENSMUSG00000024271.9_24737020_24771869_2	chr18	+	2769	22	FSM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	2	695	0	2	multi-exon	FALSE	canonical	3	667	junction_5	86.0279973411599	1442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGATTTTGCCTTA	NA	False	NA	92	True	TTTAAA	-12	NA	24737019	24771869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ENSMUSG00000024271.9_24737020_24771869_3	chr18	+	2762	22	NNC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	197.608869502668	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGATTTTGCCTTA	NA	False	NA	92	True	TTTAAA	-12	NA	24737019	24771869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752445_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ENSMUSG00000024273.9_24603926_24610855_1	chr18	+	1146	4	FSM	ENSMUSG00000024273.9	ENSMUST00000234559.2	1023	4	18	-141	0	0	multi-exon	FALSE	canonical	3	162	junction_1	19.3620476419435	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAATGGTAGTATTTAATT	359	False	NA	17	True	GATAAA	-14	NA	24603925	24610855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_24604142_24606006_24606207_24608581_24608782_24610325
ENSMUSG00000024273.9_24603926_24610855_2	chr18	+	1042	4	NIC	ENSMUSG00000024273.9	novel	1065	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	89.4886709154976	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAATGGTAGTATTTAATT	359	False	NA	17	True	GATAAA	-14	NA	24603925	24610855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_24604038_24606006_24606207_24608581_24608782_24610325
ENSMUSG00000024277.15_23937041_24025426_1	chr18	+	2538	7	FSM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	0	1488	0	5	multi-exon	FALSE	canonical	3	115	junction_6	13.0596920161065	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGAAATTTCTTTTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	23937040	24025426	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_23937279_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
ENSMUSG00000024277.15_23937160_24025426_1	chr18	+	2419	7	FSM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	119	1488	0	5	multi-exon	FALSE	canonical	3	115	junction_6	13.0596920161065	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGAAATTTCTTTTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	23937159	24025426	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_23937279_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
ENSMUSG00000024287.9_9958180_9993725_1	chr18	+	2297	20	NNC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_16	182.47716815401	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	13	True	NA	14	True	AATAAA	-14	NA	9958179	9993725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987669_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUSG00000024287.9_9995433_10030024_1	chr18	+	2242	16	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	2655	34535	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGAGGCGGCAGCTCC	NA	False	NA	NA	False	NA	NA	NA	9995432	10030024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ENSMUSG00000024300.18_33820071_33826738_1	chr17	+	1312	7	ISM	ENSMUSG00000024300.18	ENSMUST00000173426.2	3667	18	18494	0	2956	0	3prime_fragment	FALSE	canonical	3	43	junction_3	8.43932593411478	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTAAATTACTGAGTT	2220	False	NA	NA	False	AATAAA	-19	NA	33820070	33826738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_33820171_33820632_33820780_33820915_33821065_33821499_33821584_33823230_33823427_33823523_33823694_33826272
ENSMUSG00000024301.11_27136095_27151263_1	chr17	+	2257	10	NNC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	0	-294	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	130.746102082917	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTCTTAATCTTAGAT	NA	False	NA	9	True	AATAAA	-22	NA	27136094	27151263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_27136260_27139770_27139906_27139993_27140094_27141649_27141698_27141878_27142277_27142982_27143767_27144415_27144707_27144799_27144874_27145193_27145270_27151077
ENSMUSG00000024301.11_27136095_27151263_2	chr17	+	2307	11	FSM	ENSMUSG00000024301.11	ENSMUST00000078961.6	2631	11	30	294	0	-294	multi-exon	FALSE	canonical	3	91	junction_5	121.140785865042	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTCTTAATCTTAGAT	NA	False	NA	9	True	AATAAA	-22	NA	27136094	27151263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
ENSMUSG00000024313.9_21194702_21200630_1	chr18	+	422	3	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-278	-16612	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_2	15	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGTCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	21194701	21200630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_21194811_21194905_21195074_21200485
ENSMUSG00000024317.16_21134398_21159329_1	chr18	+	1159	8	FSM	ENSMUSG00000024317.16	ENSMUST00000234107.2	2422	8	0	1263	0	-1113	multi-exon	FALSE	canonical	3	116	junction_1	133.739008703443	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTAGGTTTTTAATTG	NA	False	NA	13	True	AATAAA	-18	NA	21134397	21159329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ENSMUSG00000024317.16_21134965_21159329_2	chr18	+	951	6	NIC	ENSMUSG00000024317.16	novel	2271	7	NA	NA	0	-1113	combination_of_known_junctions	FALSE	canonical	3	50	junction_3	152.012367917877	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTAGGTTTTTAATTG	NA	False	NA	13	True	AATAAA	-18	NA	21134964	21159329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21157465_21157574_21159142
ENSMUSG00000024317.16_21134965_21159329_3	chr18	+	900	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	-83	1952	0	-1113	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTAGGTTTTTAATTG	NA	False	NA	13	True	AATAAA	-18	NA	21134964	21159329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
ENSMUSG00000024317.16_21134965_21159329_5	chr18	+	843	5	FSM	ENSMUSG00000024317.16	ENSMUST00000234545.2	1769	5	-187	1113	0	-1113	multi-exon	FALSE	canonical	3	50	junction_3	174.891930917353	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTAGGTTTTTAATTG	NA	False	NA	13	True	AATAAA	-18	NA	21134964	21159329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21159142
ENSMUSG00000024317.16_21134965_21160585_1	chr18	+	2207	6	NIC	ENSMUSG00000024317.16	novel	2271	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_3	152.012367917877	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCAGTTTTGTAAAAA	NA	False	NA	3	True	AATAAA	-14	NA	21134964	21160585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21157465_21157574_21159142
ENSMUSG00000024317.16_21134965_21160585_2	chr18	+	2156	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	-83	696	0	1	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCAGTTTTGTAAAAA	NA	False	NA	3	True	AATAAA	-14	NA	21134964	21160585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
ENSMUSG00000024317.16_21134965_21160585_5	chr18	+	2099	5	FSM	ENSMUSG00000024317.16	ENSMUST00000234545.2	1769	5	-187	-143	0	1	multi-exon	FALSE	canonical	3	50	junction_3	174.891930917353	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCAGTTTTGTAAAAA	NA	False	NA	3	True	AATAAA	-14	NA	21134964	21160585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21159142
ENSMUSG00000024319.19_34174889_34185463_1	chr17	+	2734	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	103	546	0	516	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGACCGTGTCCTCTCCT	NA	False	NA	13	True	NA	NA	NA	34174888	34185463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ENSMUSG00000024327.17_34247247_34250662_1	chr17	-	1660	7	NIC	ENSMUSG00000024327.17	novel	1550	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	218.983763984659	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGCCTTTGTCTTTA	NA	False	NA	-6	True	AATAAA	-22	NA	34250662	34247246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34250521
ENSMUSG00000024334.10_34312669_34314207_1	chr17	+	1036	4	ISM	ENSMUSG00000024334.10	ENSMUST00000025192.8	1088	5	1355	1	1273	0	3prime_fragment	FALSE	canonical	2	3	junction_1	6.79869268479038	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGTGTCCTTTTCAC	554	False	NA	NA	False	ACTAAA	-15	NA	34312668	34314207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_34313056_34313281_34313564_34313656_34313793_34313976
ENSMUSG00000024346.7_36537136_36587577_1	chr18	-	617	3	FSM	ENSMUSG00000024346.7	ENSMUST00000237792.2	1024	3	0	407	0	122	multi-exon	FALSE	canonical	3	64	junction_1	1494	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGCTTTTCTCCAC	NA	False	NA	-23	True	AATAAA	-20	NA	36587577	36537135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_36537514_36584132_36584300_36587505
ENSMUSG00000024346.7_36537136_36587577_2	chr18	-	702	4	FSM	ENSMUSG00000024346.7	ENSMUST00000025204.7	1109	4	0	407	0	122	multi-exon	FALSE	canonical	3	3024	junction_2	66.9792671072342	14072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGCTTTTCTCCAC	NA	False	NA	-23	True	AATAAA	-20	NA	36587577	36537135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_36537514_36565358_36565444_36584132_36584300_36587505
ENSMUSG00000024346.7_36537258_36587577_1	chr18	-	580	4	FSM	ENSMUSG00000024346.7	ENSMUST00000025204.7	1109	4	0	529	0	0	multi-exon	FALSE	canonical	3	3024	junction_2	66.9792671072342	1647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCCAGGAGCTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	36587577	36537257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_36537514_36565358_36565444_36584132_36584300_36587505
ENSMUSG00000024350.7_35808084_35836174_1	chr18	-	1312	9	NIC	ENSMUSG00000024350.7	novel	5146	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	22.8250821466211	393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTTTACTCTCTGCTG	NA	False	NA	-10	True	AATACA	-14	NA	35836174	35808083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35835464_35835559_35836078
ENSMUSG00000024352.13_35789742_35795209_1	chr18	-	708	6	NNC	ENSMUSG00000024352.13	novel	702	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	74.4714710476435	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAATGCCCAACCTCTC	NA	False	NA	-7	True	AATAAA	-26	NA	35795209	35789741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_35789934_35790001_35790105_35793335_35793407_35793496_35793628_35793844_35793911_35795064
ENSMUSG00000024352.13_35789852_35795209_1	chr18	-	562	6	FSM	ENSMUSG00000024352.13	ENSMUST00000025209.12	702	6	30	110	0	0	multi-exon	FALSE	canonical	3	154	junction_2	20.7980768341691	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCCAGGTGCTGGATCA	NA	False	NA	-117	True	NA	NA	NA	35795209	35789851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_35789898_35790001_35790105_35793335_35793407_35793496_35793628_35793844_35793911_35795064
ENSMUSG00000024359.11_35070686_35087410_1	chr18	-	2830	17	FSM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	0	219	0	-219	multi-exon	TRUE	canonical	3	5978	junction_5	267.479905787332	8967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGTGAATGGTGAT	199	False	NA	-11	True	AATAAA	-19	NA	35087410	35070685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ENSMUSG00000024359.11_35085743_35087410_1	chr18	-	234	2	ISM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	0	15276	0	-4518	5prime_fragment	FALSE	canonical	3	6097	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGATTATGCGTAAGTA	199	False	NA	NA	False	NA	NA	NA	35087410	35085742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_-_35085789_35087222
ENSMUSG00000024369.17_35069384_35075230_1	chr17	+	1475	11	FSM	ENSMUSG00000024369.17	ENSMUST00000097343.11	1607	11	17	115	0	0	multi-exon	FALSE	canonical	3	52	junction_1	144.013228559046	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTCCGTCAGCCTCTAG	4	True	NA	30	True	AGTAAA	-20	NA	35069383	35075230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35069651_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ENSMUSG00000024369.17_35069384_35075348_1	chr17	+	1507	11	FSM	ENSMUSG00000024369.17	ENSMUST00000173357.8	1399	11	10	-118	0	0	multi-exon	FALSE	canonical	3	266	junction_1	84.0802592764794	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTATTGTAACTGCTTT	4	True	NA	NA	False	AAAAAG	-13	NA	35069383	35075348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ENSMUSG00000024370.18_34758060_34765568_1	chr18	-	2640	19	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	2115	5944	intron_retention	FALSE	non_canonical	0	0	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACTCCTGCGGCTGG	NA	False	NA	NA	False	NA	NA	NA	34765568	34758059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUSG00000024370.18_34765842_34784775_1	chr18	-	3014	16	FSM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	13	1106	0	889	multi-exon	FALSE	canonical	3	906	junction_9	78.8679909722569	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATTCCATATAATATT	NA	False	NA	-14	True	AATAAA	-14	NA	34784775	34765841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ENSMUSG00000024370.18_34766731_34784775_1	chr18	-	2125	16	FSM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	13	1995	0	0	multi-exon	FALSE	canonical	3	906	junction_9	78.8679909722569	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAAGAACGGAGCGAAGC	NA	False	NA	NA	False	NA	NA	NA	34784775	34766730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ENSMUSG00000024371.15_35112326_35117428_1	chr17	-	725	4	FSM	ENSMUSG00000024371.15	ENSMUST00000174279.2	535	4	-187	-3	-187	0	multi-exon	FALSE	canonical	3	8	junction_2	0.942809041582063	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTGGGTGTTGACAT	4586	False	NA	NA	False	AATAAA	-12	NA	35117428	35112325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35112451_35112586_35112677_35114382_35114544_35117079
ENSMUSG00000024376.8_33929970_33965848_1	chr18	-	1434	12	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_11	59.7486470679151	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGTGGGCTGTCCCAG	NA	False	NA	38	True	NA	NA	NA	33965848	33929969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33965813
ENSMUSG00000024376.8_33929970_34054023_1	chr18	-	2395	22	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-28996	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_21	43.4022999066663	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGTGGGCTGTCCCAG	NA	False	NA	38	True	NA	NA	NA	34054023	33929969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34053910
ENSMUSG00000024378.10_33335694_33346892_1	chr18	-	1788	6	FSM	ENSMUSG00000024378.10	ENSMUST00000025236.9	5097	6	23	3286	-18	764	multi-exon	FALSE	canonical	3	38	junction_1	4.66476151587624	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACTTTTGAATATCT	NA	False	NA	NA	False	NA	NA	NA	33346892	33335693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_33336869_33338103_33338219_33339172_33339300_33341229_33341280_33342095_33342211_33346686
ENSMUSG00000024378.10_33336047_33346892_1	chr18	-	1435	6	FSM	ENSMUSG00000024378.10	ENSMUST00000025236.9	5097	6	23	3639	-18	411	multi-exon	FALSE	canonical	3	38	junction_1	4.66476151587624	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTGCATTTATTCTGG	NA	False	NA	-4	True	TATAAA	-16	NA	33346892	33336046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_33336869_33338103_33338219_33339172_33339300_33341229_33341280_33342095_33342211_33346686
ENSMUSG00000024386.10_32256182_32266525_1	chr18	-	1184	5	ISM	ENSMUSG00000024386.10	ENSMUST00000234651.2	1575	9	4727	3	2274	0	3prime_fragment	FALSE	canonical	3	7	junction_1	1.78535710713571	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTCCCCGAGTACCTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	32266525	32256181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_-_32256870_32258147_32258266_32260445_32260592_32266199_32266335_32266428
ENSMUSG00000024392.18_35364113_35366283_1	chr17	+	854	7	ISM	ENSMUSG00000024392.18	ENSMUST00000173550.8	3536	24	9393	13	-751	1	3prime_fragment	FALSE	canonical	3	160	junction_6	250.07976505285	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	5133	False	NA	17	True	AATAAA	-18	NA	35364112	35366283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ENSMUSG00000024392.18_35364384_35366283_1	chr17	+	819	7	ISM	ENSMUSG00000024392.18	ENSMUST00000166426.9	3787	24	10230	-2	-480	1	3prime_fragment	FALSE	canonical	3	697	junction_1	71.9345767578661	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	5404	False	NA	17	True	AATAAA	-18	NA	35364383	35366283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ENSMUSG00000024393.15_35374825_35377427_1	chr17	-	1930	4	ISM	ENSMUSG00000024393.15	ENSMUST00000174805.2	6741	29	4518	6761	4518	1284	internal_fragment	FALSE	canonical	3	192	junction_3	12.0277457017791	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCTCTACCCCTGGAC	2839	False	NA	NA	False	NA	NA	NA	35377427	35374824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_35376184_35376323_35376535_35376854_35377156_35377368
ENSMUSG00000024400.17_31937143_32020851_1	chr18	+	1808	15	ISM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	-8	19599	0	1428	5prime_fragment	FALSE	canonical	3	169	junction_7	107.163712256014	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAGCAAGAAATGGCCAC	5647	False	NA	NA	False	AAGAAA	-16	NA	31937142	32020851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749
ENSMUSG00000024400.17_31937151_31967141_1	chr18	+	1160	6	FSM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	-78	1334	0	-1334	multi-exon	FALSE	canonical	3	387	junction_4	31.1088411870323	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACTGAATAAAATCTAAAG	5655	False	NA	NA	False	AATAAA	-21	NA	31937150	31967141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
ENSMUSG00000024404.8_12261812_12289758_1	chr18	+	3090	13	FSM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	14	686	0	0	multi-exon	FALSE	canonical	3	378	junction_8	18.23058327829	909	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTCATTGTGTGGTTAA	5519	False	NA	10	True	ATTAAA	-22	NA	12261811	12289758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ENSMUSG00000024406.17_35816915_35821669_1	chr17	+	1356	5	NNC	ENSMUSG00000024406.17	novel	1362	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	61	junction_1	1772.12772888977	18153	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGAATTTTGTTTTCCT	3036	False	NA	0	True	AATAAA	-20	NA	35816914	35821669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_35817381_35820005_35820121_35820304_35820436_35820877_35821037_35821184
ENSMUSG00000024406.17_35816915_35821669_2	chr17	+	1146	6	NNC	ENSMUSG00000024406.17	novel	1362	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1666.82531778228	1675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGAATTTTGTTTTCCT	3036	False	NA	0	True	AATAAA	-20	NA	35816914	35821669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184_35821241_35821456
ENSMUSG00000024406.17_35816915_35821669_3	chr17	+	1169	6	NNC	ENSMUSG00000024406.17	novel	1362	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1666.82531778228	3468	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGAATTTTGTTTTCCT	3036	False	NA	0	True	AATAAA	-20	NA	35816914	35821669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184_35821270_35821462
ENSMUSG00000024410.16_12301796_12323031_1	chr18	+	2048	19	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	65.1417258325602	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAATAAAGTACCTACAAC	NA	False	NA	NA	False	AATAAA	-22	NA	12301795	12323031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_12301960_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ENSMUSG00000024421.17_12635922_12675453_1	chr18	+	3166	23	ISM	ENSMUSG00000024421.17	ENSMUST00000092070.13	10548	75	169046	40617	-1334	-40617	internal_fragment	FALSE	canonical	0	0	junction_15	22.2864521719636	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGACCATCCAAACTACT	NA	False	NA	NA	False	NA	NA	NA	12635921	12675453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_+_12636222_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664891_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364
ENSMUSG00000024422.15_36198828_36203521_1	chr17	+	1045	6	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	0	4	intron_retention	FALSE	canonical	3	1016	junction_3	64.0387382761403	2671	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCATGGGAACTCTGGAAC	7382	False	NA	11	True	AATAAA	-18	NA	36198827	36203521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ENSMUSG00000024422.15_36198828_36203521_2	chr17	+	959	7	ISM	ENSMUSG00000024422.15	ENSMUST00000174366.8	3275	20	8111	-4	0	4	3prime_fragment	FALSE	canonical	3	1011	junction_1	73.3325757536626	2840	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCATGGGAACTCTGGAAC	7382	False	NA	11	True	AATAAA	-18	NA	36198827	36203521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ENSMUSG00000024423.7_13105329_13126007_1	chr18	+	3419	11	NNC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	247.681266954124	1663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13105328	13126007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_13105435_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ENSMUSG00000024425.5_38552037_38598250_1	chr18	+	1719	8	FSM	ENSMUSG00000024425.5	ENSMUST00000236085.2	1796	8	77	0	0	0	multi-exon	FALSE	canonical	3	612	junction_4	51.8734724387826	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGTGTTTCATTTGGGG	9144	False	NA	44	True	AATAAA	-29	NA	38552036	38598250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
ENSMUSG00000024426.18_36208501_36220938_1	chr17	-	1311	11	NIC	ENSMUSG00000024426.18	novel	1340	12	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	11	junction_2	44.8905335232274	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACCGACAAAAAGTGACT	NA	False	NA	-12	True	AATAAA	-24	NA	36220938	36208500	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_36208808_36209148_36209243_36212259_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ENSMUSG00000024429.10_36291017_36299759_1	chr17	+	1979	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	274	595	-263	-595	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTCCCCAGGTGGCCT	NA	False	NA	23	True	AATAAA	-17	NA	36291016	36299759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
ENSMUSG00000024436.17_36221271_36227241_1	chr17	-	972	6	FSM	ENSMUSG00000024436.17	ENSMUST00000174349.8	488	6	-12	-472	-12	0	multi-exon	FALSE	canonical	3	24	junction_2	528.957313967772	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCCTTTGGGCTGT	4336	False	NA	-6	True	AATAAA	-21	NA	36227241	36221270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36221849_36222310_36222371_36225225_36225295_36225383_36225482_36225587_36225697_36227183
ENSMUSG00000024442.7_38383312_38387806_1	chr18	+	1054	7	FSM	ENSMUSG00000024442.7	ENSMUST00000236078.2	1837	7	-16	799	0	-799	multi-exon	FALSE	canonical	3	315	junction_6	32.9515637801236	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGTCTTGAGTTCTGT	3967	False	NA	NA	False	NA	NA	NA	38383311	38387806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522
ENSMUSG00000024442.7_38383312_38394993_1	chr18	+	1705	13	FSM	ENSMUSG00000024442.7	ENSMUST00000025314.7	2394	13	0	689	0	-150	multi-exon	FALSE	canonical	3	315	junction_6	27.9179104200551	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGCCAGTTAGTTACTT	3967	False	NA	NA	False	NA	NA	NA	38383311	38394993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
ENSMUSG00000024442.7_38383312_38395682_1	chr18	+	2387	13	NNC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	107.325407316048	1192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTTGCCCTTGAGTGTG	3967	False	NA	20	True	AATAAA	-21	NA	38383311	38395682	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38391329_38391416_38392949_38393110_38394116_38394339_38394932
ENSMUSG00000024446.14_36566565_36568735_1	chr17	-	497	5	FSM	ENSMUSG00000024446.14	ENSMUST00000025319.7	729	5	226	6	0	0	multi-exon	FALSE	canonical	3	621	junction_3	61.4262769505038	2947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGTTCTGTGGTATC	NA	False	NA	-22	True	AATAAA	-14	NA	36568735	36566564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568497_36568599_36568674
ENSMUSG00000024446.14_36566565_36568735_2	chr17	-	578	4	NIC	ENSMUSG00000024446.14	novel	729	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	710	junction_3	28.7672653471886	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGTTCTGTGGTATC	NA	False	NA	-22	True	AATAAA	-14	NA	36568735	36566564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_36566691_36566835_36566962_36568333_36568599_36568674
ENSMUSG00000024454.17_38070125_38088030_1	chr18	-	2270	14	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-3	-100	intron_retention	FALSE	canonical	3	500	junction_2	40.7767772406081	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTTTCTGGGATTTTAA	NA	False	NA	0	True	AATAAA	-25	NA	38088030	38070124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ENSMUSG00000024454.17_38070125_38088030_2	chr18	-	1893	15	FSM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	39	100	-3	-100	multi-exon	FALSE	canonical	3	500	junction_2	40.0044002681746	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTTTCTGGGATTTTAA	NA	False	NA	0	True	AATAAA	-25	NA	38088030	38070124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ENSMUSG00000024457.17_37148065_37169746_2	chr17	+	2645	10	FSM	ENSMUSG00000024457.17	ENSMUST00000053434.15	3198	10	27	526	0	-526	multi-exon	FALSE	canonical	3	153	junction_5	42.9366458349457	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTGTGAAGGAAGTTTT	NA	False	NA	7	True	AATAAA	-17	NA	37148064	37169746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37165194_37167093_37167117_37167547_37167664_37167880_37167914_37168291
ENSMUSG00000024474.8_36877748_36890688_4	chr18	+	1953	20	NNC	ENSMUSG00000024474.8	novel	1955	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	384	junction_14	105.759409186979	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877747	36890688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887692_36888484_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ENSMUSG00000024477.5_46373015_46413897_1	chr18	-	2717	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	163	4597	0	657	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTCGTCTTGTTTTA	NA	False	NA	NA	False	GATAAA	-16	NA	46413897	46373014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ENSMUSG00000024486.7_36637980_36641187_1	chr18	-	1732	4	NNC	ENSMUSG00000024486.7	novel	2375	6	NA	NA	7233	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	26.0810701893581	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTTTCATTTTTGGTT	NA	False	NA	-10	True	AATAAA	-22	NA	36641187	36637979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_36639418_36639687_36639779_36640501_36640658_36641140
ENSMUSG00000024487.6_40337917_40352411_1	chr18	-	2289	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	71	968	-15	-968	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGTTTTTGCTAGTAC	NA	False	NA	-5	True	AATAAA	-17	NA	40352411	40337916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ENSMUSG00000024487.6_40338482_40352109_1	chr18	-	1626	5	NIC	ENSMUSG00000024487.6	novel	3328	6	NA	NA	282	-1533	combination_of_known_junctions	FALSE	canonical	1	5	junction_4	123.406847459936	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGTGAAGTTTACTT	NA	False	NA	-6	True	ATTAAA	-15	NA	40352109	40338481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351956
ENSMUSG00000024487.6_40338482_40352411_1	chr18	-	1724	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	71	1533	-15	-1533	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGTGAAGTTTACTT	NA	False	NA	-6	True	ATTAAA	-15	NA	40352411	40338481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ENSMUSG00000024493.10_42335412_42395156_1	chr18	-	3828	32	FSM	ENSMUSG00000024493.10	ENSMUST00000097590.5	3980	32	103	49	0	0	multi-exon	FALSE	canonical	1	536	junction_20	328.950941881023	2584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCCATGTTATTTATT	NA	False	NA	-8	True	AATAAA	-18	NA	42395156	42335411	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ENSMUSG00000024493.10_42335412_42395156_2	chr18	-	3823	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	461.780734126046	2568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCCATGTTATTTATT	NA	False	NA	-8	True	AATAAA	-18	NA	42395156	42335411	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390255_42395025
ENSMUSG00000024498.17_42644566_42663821_1	chr18	+	1033	5	ISM	ENSMUSG00000024498.17	ENSMUST00000236088.2	2365	16	2	33438	0	-5533	5prime_fragment	FALSE	canonical	3	655	junction_3	38.477266015142	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCACCCACAGACGTTAC	NA	False	NA	NA	False	NA	NA	NA	42644565	42663821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712
ENSMUSG00000024498.17_42644566_42708619_1	chr18	+	4164	22	FSM	ENSMUSG00000024498.17	ENSMUST00000237602.2	4417	22	14	239	0	0	multi-exon	FALSE	canonical	3	436	junction_6	86.5887404766016	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644565	42708619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUSG00000024525.8_67422322_67451910_1	chr18	+	1356	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	66	3632	0	1931	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	1632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422321	67451910	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ENSMUSG00000024525.8_67422322_67452165_1	chr18	+	1611	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	66	3377	0	2186	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	1856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTATCGAAGCCCACGT	NA	False	NA	9	True	ATTAAA	-16	NA	67422321	67452165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ENSMUSG00000024527.11_67537834_67562177_1	chr18	-	2027	10	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	20065	0	6841	0	3prime_fragment	FALSE	canonical	3	706	junction_6	36.8644497357683	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGTTGCCATGTTGTG	NA	False	NA	-2	True	AATAAA	-31	NA	67562177	67537833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050
ENSMUSG00000024528.9_52598765_52623816_3	chr18	+	1465	8	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	0	-1187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	201.855575769875	1381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGCTTGTTTTTCTTTTT	NA	False	NA	8	True	TATAAA	-4	NA	52598764	52623816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_52598858_52608667_52608761_52609379_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
ENSMUSG00000024528.9_52598765_52625005_1	chr18	+	2593	9	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	0	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	194.53691005822	2061	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGTGGCCTGCATATA	NA	False	NA	4	True	ATTAAA	-15	NA	52598764	52625005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515_52624801_52624865
ENSMUSG00000024528.9_52598765_52625005_2	chr18	+	2597	9	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	0	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	194.53691005822	2058	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGTGGCCTGCATATA	NA	False	NA	4	True	ATTAAA	-15	NA	52598764	52625005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515_52624796_52624856
ENSMUSG00000024537.6_67774669_67787234_1	chr18	+	940	6	NIC	ENSMUSG00000024537.6	novel	1059	7	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	172.967048885041	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGTTTTATCTGGAAAGTA	NA	False	NA	28	True	AATAAA	-34	NA	67774668	67787234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_67774806_67777378_67777551_67779062_67779122_67781197_67781317_67781842_67782017_67786955
ENSMUSG00000024538.9_53539404_53551187_1	chr18	-	1828	4	NIC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	375	junction_3	11.7756811551038	1633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	False	NA	-11	True	ATTAAA	-20	NA	53551187	53539403	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_53540138_53542196_53542382_53544058_53544692_53550911
ENSMUSG00000024539.18_67798582_67857649_1	chr18	-	1468	9	NIC	ENSMUSG00000024539.18	novel	1568	10	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	176.128814720931	1586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTGGTTTGTGTGTGT	NA	False	NA	-15	True	ATTAAA	-18	NA	67857649	67798581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67857511
ENSMUSG00000024544.10_68400727_68433281_1	chr18	+	2059	4	NIC	ENSMUSG00000024544.10	novel	3031	6	NA	NA	39589	31580	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCTCCGACCCTCCGT	1793	False	NA	NA	False	NA	NA	NA	68400726	68433281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_68402024_68405633_68405746_68408832_68409346_68433144
ENSMUSG00000024544.10_68401257_68433281_1	chr18	+	1529	4	NIC	ENSMUSG00000024544.10	novel	3031	6	NA	NA	40119	31580	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCTCCGACCCTCCGT	2323	False	NA	NA	False	NA	NA	NA	68401256	68433281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_68402024_68405633_68405746_68408832_68409346_68433144
ENSMUSG00000024563.17_76374968_76438365_1	chr18	+	2102	11	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	-149	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	81.0758287037512	382	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATTAACTTGGAAGTCC	NA	False	NA	9	True	AATAAA	-22	NA	76374967	76438365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_76375055_76395515_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ENSMUSG00000024576.15_61688345_61721293_1	chr18	+	2244	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	0	1839	0	40	multi-exon	TRUE	canonical	0	0	junction_9	613.012254927549	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACGATCTGGGATTTTGT	428	False	NA	9	True	GATAAA	-20	NA	61688344	61721293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ENSMUSG00000024576.15_61688389_61691031_1	chr18	+	868	3	NNC	ENSMUSG00000024576.15	novel	1484	10	NA	NA	0	-278	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	887.5	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCACTGGTCATTTGTA	472	False	NA	NA	False	AATAAA	-17	NA	61688388	61691031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_61688945_61689573_61689681_61690826
ENSMUSG00000024576.15_61688389_61720602_2	chr18	+	1509	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	44	2530	0	0	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGTGGACAACCATTTAC	472	False	NA	NA	False	NA	NA	NA	61688388	61720602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ENSMUSG00000024576.15_61688389_61721377_1	chr18	+	2368	11	FSM	ENSMUSG00000024576.15	ENSMUST00000167187.8	1222	11	-371	-775	0	2	multi-exon	FALSE	canonical	0	0	junction_10	819.69914602859	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGTGAAATTTTTTTAAA	472	False	NA	29	True	ATTAAA	-22	NA	61688388	61721377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ENSMUSG00000024576.15_61688389_61721377_3	chr18	+	2284	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	44	1755	0	2	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGTGAAATTTTTTTAAA	472	False	NA	29	True	ATTAAA	-22	NA	61688388	61721377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ENSMUSG00000024579.8_61829908_61840685_1	chr18	-	2038	7	NNC	ENSMUSG00000024579.8	novel	2017	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	34.3693177121688	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGACTTATTCTTTTT	NA	False	NA	-1	True	TATAAA	-16	NA	61840685	61829907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266_61835442_61836423_61836466_61836582_61836790_61840564
ENSMUSG00000024581.14_63110947_63130432_2	chr18	+	1424	11	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	73.6791015146086	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTGGTTCTTTCGATG	NA	False	NA	14	True	NA	NA	NA	63110946	63130432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_63111096_63113536_63113605_63115689_63115775_63117101_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ENSMUSG00000024583.4_63797177_63825425_1	chr18	-	1248	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	83	3012	-32	0	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	5083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAAGTCTTCGTCATTCT	NA	False	NA	-7	True	AATAAA	-19	NA	63825425	63797176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
ENSMUSG00000024583.4_63797177_63825508_1	chr18	-	1330	8	NNC	ENSMUSG00000024583.4	novel	4343	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	328.075215368024	4987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAAGTCTTCGTCATTCT	NA	False	NA	-7	True	AATAAA	-19	NA	63825508	63797176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_63797404_63804652_63804758_63807119_63807288_63808510_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
ENSMUSG00000024587.11_64632726_64649570_1	chr18	-	2579	15	NNC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1438.985188405	3505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649570	64632725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643597_64644677_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ENSMUSG00000024587.11_64632726_64649570_2	chr18	-	2579	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1359.86379870206	6019	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649570	64632725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642382_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUSG00000024587.11_64632726_64649570_3	chr18	-	2577	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1370.53150162219	3960	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649570	64632725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638443_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUSG00000024587.11_64632726_64649570_4	chr18	-	2582	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1337.91481837391	3546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649570	64632725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643597_64644677_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUSG00000024587.11_64633284_64649570_1	chr18	-	2021	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1359.86379870206	1850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTCTGACATCCAGTA	NA	False	NA	-10	True	AATAAA	-26	NA	64649570	64633283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642382_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUSG00000024587.11_64633284_64649570_2	chr18	-	2031	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	1361.48132861353	2542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTCTGACATCCAGTA	NA	False	NA	-10	True	AATAAA	-26	NA	64649570	64633283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645049_64645121_64648396_64648480_64649486
ENSMUSG00000024587.11_64633284_64649570_3	chr18	-	2019	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1370.53150162219	1092	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTCTGACATCCAGTA	NA	False	NA	-10	True	AATAAA	-26	NA	64649570	64633283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638443_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUSG00000024587.11_64633284_64649570_4	chr18	-	576	5	NNC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2179.85691904308	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTCTGACATCCAGTA	NA	False	NA	-10	True	AATAAA	-26	NA	64649570	64633283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_64633534_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUSG00000024587.11_64633284_64649570_5	chr18	-	465	4	NNC	ENSMUSG00000024587.11	novel	2103	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2237.38870610858	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTCTGACATCCAGTA	NA	False	NA	-10	True	AATAAA	-26	NA	64649570	64633283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_64633519_64645057_64645121_64648396_64648480_64649486
ENSMUSG00000024587.11_64633284_64649570_6	chr18	-	2024	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1337.91481837391	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTCTGACATCCAGTA	NA	False	NA	-10	True	AATAAA	-26	NA	64649570	64633283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643597_64644677_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUSG00000024587.11_64633589_64649570_1	chr18	-	1718	15	FSM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	109	860	0	0	multi-exon	FALSE	canonical	3	2259	junction_14	785.439045946889	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGGGCCCTCAAGCACG	NA	False	NA	NA	False	NA	NA	NA	64649570	64633588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ENSMUSG00000024587.11_64637314_64649570_1	chr18	-	1306	11	ISM	ENSMUSG00000024587.11	ENSMUST00000237585.2	2268	14	-62	4025	0	0	5prime_fragment	FALSE	canonical	3	3478	junction_10	589.741502694189	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAATATTTAATACTG	NA	False	NA	NA	False	NA	NA	NA	64649570	64637313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_-_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUSG00000024587.11_64644731_64649570_1	chr18	-	367	5	ISM	ENSMUSG00000024587.11	ENSMUST00000236392.2	935	9	-1	6744	0	3992	5prime_fragment	FALSE	canonical	3	3478	junction_4	806.901790802326	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTATTATTAAAA	NA	False	NA	NA	False	NA	NA	NA	64649570	64644730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_-_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUSG00000024587.11_64644855_64649570_1	chr18	-	327	4	ISM	ENSMUSG00000024587.11	ENSMUST00000236392.2	935	9	-1	6868	0	3868	5prime_fragment	FALSE	canonical	3	3478	junction_3	878.411571468004	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGATGAATTTGCCACT	NA	False	NA	64	True	AAGAAA	-5	NA	64649570	64644854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_-_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUSG00000024590.9_56840885_56886496_1	chr18	+	473	2	NNC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	751	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTCTTTTTAACCC	NA	False	NA	20	True	AATAAA	-19	NA	56840884	56886496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_56840924_56886062
ENSMUSG00000024592.16_57090169_57108440_1	chr18	-	1136	5	FSM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	0	1264	0	517	multi-exon	FALSE	canonical	3	74	junction_4	15.0228991875736	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACATGTGTTTTTGTAC	NA	False	NA	NA	False	TATAAA	-4	NA	57108440	57090168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108405
ENSMUSG00000024594.10_57487818_57522681_1	chr18	+	1678	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	5	3347	0	374	multi-exon	FALSE	canonical	3	500	junction_4	197.841121547064	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTCTTTTTACTGTC	NA	False	NA	NA	False	AATAAA	-33	NA	57487817	57522681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ENSMUSG00000024594.10_57506964_57522681_1	chr18	+	949	5	NNC	ENSMUSG00000024594.10	novel	489	4	NA	NA	0	374	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	400.806062828396	2763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTCTTTTTACTGTC	NA	False	NA	NA	False	AATAAA	-33	NA	57506963	57522681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_57507156_57507598_57507763_57514699_57514804_57517245_57517353_57522299
ENSMUSG00000024594.10_57506964_57522681_2	chr18	+	944	5	NNC	ENSMUSG00000024594.10	novel	523	5	NA	NA	0	374	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	408.683480825932	2856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTCTTTTTACTGTC	NA	False	NA	NA	False	AATAAA	-33	NA	57506963	57522681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_57507156_57507598_57507763_57514708_57514804_57517245_57517349_57522291
ENSMUSG00000024594.10_57506964_57522681_3	chr18	+	897	5	FSM	ENSMUSG00000024594.10	ENSMUST00000238057.2	523	5	0	-374	0	374	multi-exon	FALSE	canonical	3	123	junction_1	350.033123432626	2486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTCTTTTTACTGTC	NA	False	NA	NA	False	AATAAA	-33	NA	57506963	57522681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_57507100_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ENSMUSG00000024603.9_60659273_60690322_1	chr18	+	2222	13	FSM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	0	1516	0	-689	multi-exon	FALSE	canonical	3	145	junction_9	21.4333592534835	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCATGCCCTGTTCTATA	NA	False	NA	12	True	ATTAAA	-15	NA	60659272	60690322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ENSMUSG00000024603.9_60659273_60691133_1	chr18	+	3033	13	FSM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	0	705	0	122	multi-exon	FALSE	canonical	3	145	junction_9	21.4333592534835	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTATGAAACCACAACTCA	NA	False	NA	NA	False	CATAAA	-17	NA	60659272	60691133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ENSMUSG00000024608.12_60907668_60911567_1	chr18	+	539	5	NNC	ENSMUSG00000024608.12	novel	597	5	NA	NA	0	38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10943.7120616133	13317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGGACTTCTCATTAT	NA	False	NA	17	True	AAGAAA	-26	NA	60907667	60911567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_60907759_60909472_60909624_60910001_60910164_60910891_60910962_60911502
ENSMUSG00000024608.12_60907737_60911618_1	chr18	+	515	5	NNC	ENSMUSG00000024608.12	novel	597	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10879.8799711899	23296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	68	True	AATAAA	-18	NA	60907736	60911618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_60907759_60909472_60909628_60910018_60910164_60910884_60910962_60911502
ENSMUSG00000024608.12_60907737_60911618_2	chr18	+	521	5	NNC	ENSMUSG00000024608.12	novel	597	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10943.7120616133	123392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	68	True	AATAAA	-18	NA	60907736	60911618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_60907759_60909472_60909624_60910001_60910164_60910891_60910962_60911502
ENSMUSG00000024608.12_60907737_60911618_3	chr18	+	59	2	NNC	ENSMUSG00000024608.12	novel	597	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	68	True	AATAAA	-18	NA	60907736	60911618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_60907742_60911564
ENSMUSG00000024608.12_60907737_60911618_4	chr18	+	511	5	NNC	ENSMUSG00000024608.12	novel	597	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11701.1630698619	17016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	68	True	AATAAA	-18	NA	60907736	60911618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_60907759_60909489_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUSG00000024613.17_60946827_60961807_1	chr18	-	2174	11	ISM	ENSMUSG00000024613.17	ENSMUST00000176630.8	4529	25	20236	0	292	0	3prime_fragment	FALSE	canonical	3	677	junction_9	223.989307780528	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60961807	60946826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727
ENSMUSG00000024613.17_60952480_60981990_1	chr18	-	3089	19	ISM	ENSMUSG00000024613.17	ENSMUST00000176630.8	4529	25	53	5653	0	-1378	5prime_fragment	FALSE	canonical	2	677	junction_3	186.967358674921	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCGGCCCACAGGCTGG	NA	False	NA	NA	False	NA	NA	NA	60981990	60952479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_-_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ENSMUSG00000024613.17_60952617_60981990_1	chr18	-	2952	19	ISM	ENSMUSG00000024613.17	ENSMUST00000176630.8	4529	25	53	5790	0	-1515	5prime_fragment	FALSE	canonical	2	677	junction_3	186.967358674921	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAACAAGCTCGGGAAATC	NA	False	NA	NA	False	NA	NA	NA	60981990	60952616	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_-_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ENSMUSG00000024619.9_61151934_61153592_1	chr18	-	1227	2	ISM	ENSMUSG00000024619.9	ENSMUST00000025521.9	1750	3	15679	0	15679	0	3prime_fragment	FALSE	canonical	3	995	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGCCATCCTTTCTCGT	NA	False	NA	-5	True	ATTAAA	-22	NA	61153592	61151933	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_-_61153014_61153445
ENSMUSG00000024640.10_15882494_15902298_1	chr19	-	2040	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	125	452	-4	0	multi-exon	FALSE	canonical	3	2829	junction_2	225.154079188008	12942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCATTGCCTGTGAAT	NA	False	NA	-17	True	ATTAAA	-17	NA	15902298	15882493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ENSMUSG00000024640.10_15882494_15902356_1	chr19	-	2098	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	67	452	-62	0	multi-exon	FALSE	canonical	3	2829	junction_2	225.154079188008	13061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCATTGCCTGTGAAT	NA	False	NA	-17	True	ATTAAA	-17	NA	15902356	15882493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ENSMUSG00000024640.10_15882841_15902356_1	chr19	-	1751	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	67	799	-62	-347	multi-exon	FALSE	canonical	3	2829	junction_2	225.154079188008	3295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGTGCATGACTGTC	NA	False	NA	-4	True	AATGAA	-19	NA	15902356	15882840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ENSMUSG00000024644.18_84685596_84703752_1	chr18	-	2038	12	NNC	ENSMUSG00000024644.18	novel	2124	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	179.141940122194	1127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAACTGCCGTGGTCTGA	NA	False	NA	-4	True	AATAAA	-19	NA	84703752	84685595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695528_84696832_84696996_84699059_84699204_84699962_84700053_84703727
ENSMUSG00000024646.15_84869502_84897989_2	chr18	+	769	3	NNC	ENSMUSG00000024646.15	novel	534	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	486.5	1864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATATGTGTCTGTCTGT	NA	False	NA	12	True	AATATA	-17	NA	84869501	84897989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_84869733_84889629_84889779_84897600
ENSMUSG00000024654.9_9089401_9113000_1	chr19	-	2026	7	FSM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	0	2169	0	-2169	multi-exon	FALSE	canonical	3	393	junction_3	31.0344790336311	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGTTAGGTGTCACT	NA	False	NA	NA	False	AATAAA	-21	NA	9113000	9089400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
ENSMUSG00000024654.9_9090292_9113000_1	chr19	-	1135	7	FSM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	0	3060	0	-3060	multi-exon	FALSE	canonical	3	393	junction_3	31.0344790336311	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCAGTCTGTCCCTCCTTTT	NA	False	NA	1	True	NA	NA	NA	9113000	9090291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
ENSMUSG00000024659.16_20350794_20368037_1	chr19	-	1401	13	FSM	ENSMUSG00000024659.16	ENSMUST00000025561.8	1674	13	271	2	0	0	multi-exon	FALSE	canonical	3	18	junction_4	3.1446603773522	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGTGTCATTGTCTC	7276	False	NA	0	True	AATAAA	-21	NA	20368037	20350793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_20351135_20352588_20352712_20354015_20354075_20354970_20355067_20355759_20355854_20357012_20357070_20357703_20357784_20359413_20359505_20360225_20360340_20361120_20361216_20361838_20361948_20362056_20362137_20367975
ENSMUSG00000024660.10_9849706_9854046_1	chr19	-	963	5	ISM	ENSMUSG00000024660.10	ENSMUST00000237439.2	2643	18	18778	-335	-1759	0	3prime_fragment	FALSE	canonical	3	446	junction_4	34.9070193514141	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTGTGGATATTGTGA	NA	False	NA	34	True	AATAAA	-15	NA	9854046	9849705	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953
ENSMUSG00000024660.10_9849706_9876853_1	chr19	-	3128	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	62	46	0	0	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTGTGGATATTGTGA	NA	False	NA	34	True	AATAAA	-15	NA	9876853	9849705	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ENSMUSG00000024661.8_9960068_9962201_1	chr19	+	610	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	58	261	0	22	multi-exon	FALSE	canonical	3	5325	junction_2	217.148694574836	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTGACCACGTGACCAA	4927	False	NA	NA	False	ATTAAA	-4	NA	9960067	9962201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
ENSMUSG00000024661.8_9960068_9962324_1	chr19	+	733	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	58	138	0	19	multi-exon	FALSE	canonical	3	5325	junction_2	217.148694574836	5518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGACTTTACTGGTCACT	4927	False	NA	NA	False	NA	NA	NA	9960067	9962324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
ENSMUSG00000024661.8_9960068_9962457_1	chr19	+	859	4	NNC	ENSMUSG00000024661.8	novel	929	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2611.97375348392	63913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTTTCTTTGTGATTG	4927	False	NA	18	True	AATAAA	-16	NA	9960067	9962457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_9960341_9961544_9961692_9961923_9962050_9962144
ENSMUSG00000024666.7_10547842_10554471_1	chr19	-	1335	5	FSM	ENSMUSG00000024666.7	ENSMUST00000025568.3	1590	5	255	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	27.5896266738062	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1765	False	NA	-4	True	AATAAA	-15	NA	10554471	10547841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554447
ENSMUSG00000024666.7_10547842_10554471_2	chr19	-	1450	5	NIC	ENSMUSG00000024666.7	novel	1529	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	52.1464284491278	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1765	False	NA	-4	True	AATAAA	-15	NA	10554471	10547841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554332
ENSMUSG00000024666.7_10547842_10554471_3	chr19	-	1377	5	NIC	ENSMUSG00000024666.7	novel	1260	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	67.4884249334654	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1765	False	NA	-4	True	AATAAA	-15	NA	10554471	10547841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_10548633_10548892_10548969_10552200_10552300_10552603_10552876_10554332
ENSMUSG00000024666.7_10547842_10554726_1	chr19	-	1517	5	FSM	ENSMUSG00000024666.7	ENSMUST00000235990.2	1260	5	-255	-2	0	0	multi-exon	FALSE	canonical	3	27	junction_3	58.8175143983491	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1510	False	NA	-4	True	AATAAA	-15	NA	10554726	10547841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10548633_10548892_10548969_10552200_10552300_10552603_10552876_10554447
ENSMUSG00000024667.13_10502630_10524766_2	chr19	-	3249	10	Fusion	ENSMUSG00000024668.9_ENSMUSG00000024667.13	novel	935	6	NA	NA	8334	8599	multi-exon	FALSE	non_canonical	0	0	junction_1	0	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGGTCCCGCCCCCCC	950	False	NA	NA	False	NA	NA	NA	10524766	10502629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr19_-_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ENSMUSG00000024667.13_10502630_10525019_1	chr19	-	3502	10	Fusion	ENSMUSG00000024668.9_ENSMUSG00000024667.13	novel	935	6	NA	NA	8081	8599	multi-exon	FALSE	non_canonical	0	0	junction_1	0	560	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGGTCCCGCCCCCCC	697	False	NA	NA	False	NA	NA	NA	10525019	10502629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr19_-_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ENSMUSG00000024667.13_10502630_10525019_3	chr19	-	3475	10	Fusion	ENSMUSG00000024668.9_ENSMUSG00000024667.13	novel	935	6	NA	NA	8081	8599	multi-exon	FALSE	non_canonical	0	0	junction_1	0	539	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGGTCCCGCCCCCCC	697	False	NA	NA	False	NA	NA	NA	10525019	10502629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr19_-_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ENSMUSG00000024667.13_10527825_10533102_1	chr19	-	879	6	NIC	ENSMUSG00000024667.13	novel	876	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	28.4717403753266	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGGTTGATTTTCTCCT	NA	False	NA	-3	True	AATAAA	-17	NA	10533102	10527824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_10528184_10528321_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533062
ENSMUSG00000024668.9_10479005_10502500_1	chr19	-	1895	4	FSM	ENSMUSG00000024668.9	ENSMUST00000025570.8	2981	4	-21	1107	-14	0	multi-exon	FALSE	canonical	3	201	junction_1	14.7196014438797	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTATTGTTTGATCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	10502500	10479004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10502422
ENSMUSG00000024668.9_10480302_10502500_1	chr19	-	598	4	FSM	ENSMUSG00000024668.9	ENSMUST00000025570.8	2981	4	-21	2404	-14	-105	multi-exon	FALSE	canonical	3	201	junction_1	14.7196014438797	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGCCTCCTGCTTCTCC	NA	False	NA	NA	False	NA	NA	NA	10502500	10480301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10502422
ENSMUSG00000024683.7_11747755_11752167_1	chr19	+	1005	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	0	157	0	10	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	1870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTCTCTTTGGTCAGTT	161	False	NA	35	True	ATTAAA	-23	NA	11747754	11752167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
ENSMUSG00000024683.7_11747755_11753842_1	chr19	+	2680	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	0	-1518	0	1518	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	2010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTTGTGAGTTTCC	161	False	NA	4	True	AATAAA	-13	NA	11747754	11753842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
ENSMUSG00000024725.14_18558173_18609153_1	chr19	-	1245	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	0	1481	0	0	multi-exon	FALSE	canonical	3	989	junction_2	42.8315679128904	2606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTTTGTGCTATCACT	NA	False	NA	-2	True	AATAAA	-21	NA	18609153	18558172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
ENSMUSG00000024725.14_18558173_18609187_1	chr19	-	1279	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	-34	1481	0	0	multi-exon	FALSE	canonical	3	989	junction_2	42.8315679128904	2614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTTTGTGCTATCACT	NA	False	NA	-2	True	AATAAA	-21	NA	18609187	18558172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
ENSMUSG00000024725.14_18558356_18609153_1	chr19	-	1062	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	0	1664	0	0	multi-exon	FALSE	canonical	3	989	junction_2	42.8315679128904	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTGTAATAGTTTTTTT	NA	False	NA	-2	True	AATAAA	-34	NA	18609153	18558355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
ENSMUSG00000024732.8_10919752_10926617_1	chr19	-	2083	4	FSM	ENSMUSG00000024732.8	ENSMUST00000025639.7	3003	4	13	907	-2	-907	multi-exon	FALSE	canonical	3	231	junction_1	21.483844059096	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGACAGGTACACTGA	NA	False	NA	NA	False	AATAAA	-13	NA	10926617	10919751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641
ENSMUSG00000024732.8_10920164_10926617_1	chr19	-	1551	5	NNC	ENSMUSG00000024732.8	novel	3003	4	NA	NA	-2	-1319	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	114.6799895361	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCTTCAGCTGTGAATT	NA	False	NA	-95	True	AAAACA	-7	NA	10926617	10920163	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641_10926163_10926282
ENSMUSG00000024732.8_10920164_10926617_2	chr19	-	1671	4	FSM	ENSMUSG00000024732.8	ENSMUST00000025639.7	3003	4	13	1319	-2	-1319	multi-exon	FALSE	canonical	3	231	junction_1	21.483844059096	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCTTCAGCTGTGAATT	NA	False	NA	-95	True	AAAACA	-7	NA	10926617	10920163	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641
ENSMUSG00000024732.8_10920164_10926617_3	chr19	-	1551	5	NNC	ENSMUSG00000024732.8	novel	3003	4	NA	NA	-2	-1319	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	114.6799895361	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCTTCAGCTGTGAATT	NA	False	NA	-95	True	AAAACA	-7	NA	10926617	10920163	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641_10926169_10926288
ENSMUSG00000024735.14_10872595_10882896_1	chr19	+	2191	16	FSM	ENSMUSG00000024735.14	ENSMUST00000179297.3	6035	16	-183	4027	0	0	multi-exon	FALSE	canonical	3	14	junction_3	36.1106940146852	1836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCAGCTTCTTGTGTCTG	NA	False	NA	15	True	ATTAAA	-21	NA	10872594	10882896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876289_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
ENSMUSG00000024735.14_10872737_10882896_1	chr19	+	2049	16	FSM	ENSMUSG00000024735.14	ENSMUST00000179297.3	6035	16	-41	4027	0	0	multi-exon	FALSE	canonical	3	14	junction_3	36.1106940146852	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCAGCTTCTTGTGTCTG	NA	False	NA	15	True	ATTAAA	-21	NA	10872736	10882896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876289_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
ENSMUSG00000024738.7_10646320_10654190_1	chr19	-	1306	8	ISM	ENSMUSG00000024738.7	ENSMUST00000025647.7	1417	9	1245	0	-9	0	3prime_fragment	FALSE	canonical	3	9	junction_1	1.72614942479922	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATACTAACGTCTGCTCT	NA	False	NA	NA	False	AATAAA	-20	NA	10654190	10646319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_10646626_10646718_10646818_10646891_10647037_10649151_10649269_10651001_10651202_10652190_10652310_10652407_10652526_10653988
ENSMUSG00000024740.11_10582987_10607186_1	chr19	+	4160	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	678.003560759357	1810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	666	False	NA	59	True	AATAAA	-19	NA	10582986	10607186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589013_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024740.11_10582987_10607186_2	chr19	+	4160	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	672.619392846457	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	666	False	NA	59	True	AATAAA	-19	NA	10582986	10607186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605794_10605913_10606442
ENSMUSG00000024742.16_10176502_10181307_1	chr19	-	1120	3	NNC	ENSMUSG00000024742.16	novel	2341	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	416	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	2155	False	NA	NA	False	AATAAA	-14	NA	10181307	10176501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_10177234_10178329_10178462_10181051
ENSMUSG00000024742.16_10176502_10181307_2	chr19	-	1697	3	NNC	ENSMUSG00000024742.16	novel	2341	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	416	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	2155	False	NA	NA	False	AATAAA	-14	NA	10181307	10176501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_10177439_10177957_10178462_10181051
ENSMUSG00000024742.16_10176502_10181307_3	chr19	-	1004	3	NNC	ENSMUSG00000024742.16	novel	2100	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	221.5	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	2155	False	NA	NA	False	AATAAA	-14	NA	10181307	10176501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_10177234_10178329_10178462_10181167
ENSMUSG00000024750.12_21253789_21259391_1	chr19	+	2108	5	ISM	ENSMUSG00000024750.12	ENSMUST00000025659.12	2467	6	3179	263	385	-263	3prime_fragment	FALSE	canonical	3	378	junction_4	0.707106781186548	318	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCTTGTTTATTGGGTT	NA	False	NA	18	True	AATAAA	-18	NA	21253788	21259391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_+_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ENSMUSG00000024759.15_7471803_7511566_1	chr19	+	1969	13	FSM	ENSMUSG00000024759.15	ENSMUST00000025668.9	4368	13	0	2399	0	1	multi-exon	TRUE	canonical	3	31	junction_6	6.18409698788397	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTGGAAGCAGTTCT	NA	False	NA	NA	False	AATAAA	-33	NA	7471802	7511566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_7472027_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
ENSMUSG00000024764.11_7203038_7218402_1	chr19	-	3308	6	FSM	ENSMUSG00000024764.11	ENSMUST00000237834.2	1569	6	17	-1756	-3	0	multi-exon	TRUE	canonical	3	441	junction_1	33.2060235499525	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218402	7203037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_7205457_7205716_7205795_7207086_7207649_7211468_7211522_7212427_7212524_7218302
ENSMUSG00000024767.12_7176211_7183635_1	chr19	-	1023	7	FSM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	46	644	-36	-636	multi-exon	FALSE	canonical	3	1089	junction_1	76.373351955305	4037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGAGTGTGCGCTTCCCT	NA	False	NA	-7	True	ATTAAA	-18	NA	7183635	7176210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
ENSMUSG00000024767.12_7176211_7183635_2	chr19	-	1218	6	NIC	ENSMUSG00000024767.12	novel	1713	7	NA	NA	-36	-636	intron_retention	FALSE	canonical	3	1089	junction_1	77.0246713722298	3733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGAGTGTGCGCTTCCCT	NA	False	NA	-7	True	ATTAAA	-18	NA	7183635	7176210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_7176605_7176736_7176932_7177027_7177427_7181422_7181522_7181754_7181817_7183566
ENSMUSG00000024785.8_29078775_29121246_1	chr19	+	2227	8	NIC	ENSMUSG00000024785.8	novel	1803	9	NA	NA	0	3	intron_retention	FALSE	canonical	3	369	junction_1	17.8885438199983	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCACTGTAGTGTAAATCA	NA	False	NA	30	True	CATAAA	-22	NA	29078774	29121246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
ENSMUSG00000024790.9_6166030_6167880_1	chr19	-	642	2	FSM	ENSMUSG00000024790.9	ENSMUST00000113533.3	1442	2	800	0	800	0	multi-exon	FALSE	canonical	3	283	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACAGGAACTTTTAGAC	NA	False	NA	-9	True	AATAAA	-25	NA	6167880	6166029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6166618_6167826
ENSMUSG00000024791.11_6135013_6141807_1	chr19	+	2017	6	NNC	ENSMUSG00000024791.11	novel	2024	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	182.406140247526	1307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGCTTTTTATT	NA	False	NA	35	True	AATAAA	-20	NA	6135012	6141807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_6135239_6135434_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677
ENSMUSG00000024792.10_6130795_6134723_1	chr19	-	1252	8	NIC	ENSMUSG00000024792.10	novel	1287	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	201.730978669866	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTCTGAAGCAGCTTT	6690	False	NA	NA	False	AATAAA	-15	NA	6134723	6130794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134675
ENSMUSG00000024792.10_6134191_6134957_1	chr19	-	434	2	ISM	ENSMUSG00000024792.10	ENSMUST00000160712.8	706	6	17	1900	0	-1555	5prime_fragment	FALSE	canonical	3	381	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGAGTCTGATGAGAGAA	6456	False	NA	NA	False	NA	NA	NA	6134957	6134190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_6134492_6134824
ENSMUSG00000024797.15_6118020_6127230_1	chr19	-	2496	10	FSM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	31	148	0	0	multi-exon	FALSE	canonical	3	124	junction_7	16.3026923475166	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTTGCCTGCAGGGGC	1018	False	NA	-3	True	AATAAA	-18	NA	6127230	6118019	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ENSMUSG00000024799.17_6112851_6117857_1	chr19	-	1259	9	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	79.8254932649965	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	-6	True	NA	0	True	AATAAA	-15	NA	6117857	6112850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117698
ENSMUSG00000024799.17_6112851_6117857_2	chr19	-	1326	10	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	76.3254888416287	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	-6	True	NA	0	True	AATAAA	-15	NA	6117857	6112850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116594_6116997_6117053_6117152_6117350_6117698
ENSMUSG00000024799.17_6116159_6117857_1	chr19	-	892	5	FSM	ENSMUSG00000024799.17	ENSMUST00000160354.8	1443	5	-51	602	0	0	multi-exon	FALSE	canonical	3	213	junction_4	26.5988721565408	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGAGAGAGCGCGCGCA	-6	True	NA	-10	True	TATAAA	-13	NA	6117857	6116158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
ENSMUSG00000024800.9_36061116_36082015_1	chr19	+	998	11	FSM	ENSMUSG00000024800.9	ENSMUST00000025714.9	1145	11	-15	162	0	137	multi-exon	FALSE	canonical	3	930	junction_4	72.6416547168359	2480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGACTAACAGCTTA	NA	False	NA	20	True	AATAAA	-16	NA	36061115	36082015	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ENSMUSG00000024800.9_36061116_36082015_2	chr19	+	949	11	NIC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	0	137	combination_of_known_junctions	FALSE	canonical	3	67	junction_7	297.230701644362	2228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGACTAACAGCTTA	NA	False	NA	20	True	AATAAA	-16	NA	36061115	36082015	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077640_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ENSMUSG00000024800.9_36061116_36082177_1	chr19	+	1111	11	NIC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_7	297.230701644362	3522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTTTAAATTTTACTA	NA	False	NA	NA	False	AATAAA	-26	NA	36061115	36082177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077640_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ENSMUSG00000024807.19_6103652_6107781_1	chr19	+	1730	4	NIC	ENSMUSG00000024807.19	novel	4080	10	NA	NA	6518	4039	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	4295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCATATGCGCGCGCA	7785	False	NA	NA	False	NA	NA	NA	6103651	6107781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_6105013_6105105_6105231_6106958_6107110_6107688
ENSMUSG00000024824.8_4242172_4245419_1	chr19	-	1358	7	Fusion	ENSMUSG00000117839.2_ENSMUSG00000024824.8	novel	2101	10	NA	NA	-2638	-64	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCGCCCTCTTACAGCC	NA	False	NA	NA	False	NA	NA	NA	4245419	4242171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr19_-_4242271_4242743_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244777_4244906_4244980
ENSMUSG00000024824.8_4242172_4245419_2	chr19	-	1360	7	Fusion	ENSMUSG00000117839.2_ENSMUSG00000024824.8	novel	2101	10	NA	NA	-2638	-64	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5927	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCGCCCTCTTACAGCC	NA	False	NA	NA	False	NA	NA	NA	4245419	4242171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr19_-_4242271_4242748_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
ENSMUSG00000024824.8_4242172_4245419_3	chr19	-	1296	7	Fusion	ENSMUSG00000117839.2_ENSMUSG00000024824.8	novel	2101	10	NA	NA	-2638	-64	multi-exon	FALSE	non_canonical	0	0	junction_1	0	570	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCGCCCTCTTACAGCC	NA	False	NA	NA	False	NA	NA	NA	4245419	4242171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr19_-_4242271_4242743_4242876_4243020_4243252_4243834_4243871_4244465_4244690_4244770_4244906_4244980
ENSMUSG00000024824.8_4242172_4245419_4	chr19	-	1371	7	Fusion	ENSMUSG00000117839.2_ENSMUSG00000024824.8	novel	2101	10	NA	NA	-2638	-64	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCGCCCTCTTACAGCC	NA	False	NA	NA	False	NA	NA	NA	4245419	4242171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr19_-_4242271_4242743_4242876_4243020_4243252_4243765_4243877_4244465_4244690_4244770_4244906_4244980
ENSMUSG00000024824.8_4242172_4245419_5	chr19	-	1369	7	Fusion	ENSMUSG00000117839.2_ENSMUSG00000024824.8	novel	2101	10	NA	NA	-2638	-64	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCGCCCTCTTACAGCC	NA	False	NA	NA	False	NA	NA	NA	4245419	4242171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr19_-_4242271_4242743_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244895_4244965
ENSMUSG00000024826.16_5947415_5962835_1	chr19	-	2373	11	NIC	ENSMUSG00000024826.16	novel	2406	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	226.702536377518	1607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGCTGGACAGTTTGT	1336	False	NA	-26	True	AATAAA	-14	NA	5962835	5947414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954341_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ENSMUSG00000024826.16_5947415_5962835_2	chr19	-	2379	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	64	871	0	0	multi-exon	FALSE	canonical	3	642	junction_2	68.1739686390634	1764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGCTGGACAGTTTGT	1336	False	NA	-26	True	AATAAA	-14	NA	5962835	5947414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ENSMUSG00000024826.16_5948227_5962835_1	chr19	-	1561	11	NIC	ENSMUSG00000024826.16	novel	3314	11	NA	NA	0	344	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	226.702536377518	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTTCCAGGGTTTTG	1336	False	NA	NA	False	NA	NA	NA	5962835	5948226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954341_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ENSMUSG00000024826.16_5948227_5962835_2	chr19	-	1567	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	64	1683	0	344	multi-exon	FALSE	canonical	3	642	junction_2	68.1739686390634	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTTCCAGGGTTTTG	1336	False	NA	NA	False	NA	NA	NA	5962835	5948226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ENSMUSG00000024830.18_4198653_4204034_1	chr19	-	1582	10	NIC	ENSMUSG00000024830.18	novel	4586	15	NA	NA	4117	5337	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGCAGGAAGCGGGAAT	NA	False	NA	NA	False	NA	NA	NA	4204034	4198652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203595
ENSMUSG00000024830.18_4198653_4204034_2	chr19	-	1839	11	NIC	ENSMUSG00000024830.18	novel	4586	15	NA	NA	4117	5337	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGCAGGAAGCGGGAAT	NA	False	NA	NA	False	NA	NA	NA	4204034	4198652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_4198722_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
ENSMUSG00000024830.18_4198653_4204034_3	chr19	-	1589	10	NIC	ENSMUSG00000024830.18	novel	4586	15	NA	NA	4117	5337	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGCAGGAAGCGGGAAT	NA	False	NA	NA	False	NA	NA	NA	4204034	4198652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_4198736_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203595
ENSMUSG00000024830.18_4198653_4204034_4	chr19	-	1842	11	NNC	ENSMUSG00000024830.18	novel	4586	15	NA	NA	4117	5337	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGCAGGAAGCGGGAAT	NA	False	NA	NA	False	NA	NA	NA	4204034	4198652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203599
ENSMUSG00000024830.18_4206791_4213299_1	chr19	-	1842	14	NIC	ENSMUSG00000024830.18	novel	1979	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	79	junction_5	10.8698595277881	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGCTTTTGCCGGACTC	2803	False	NA	1	True	AGTAAA	-17	NA	4213299	4206790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
ENSMUSG00000024835.16_4198653_4204034_1	chr19	+	1846	11	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	402	junction_1	75.9439925208044	1756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACCTACTGTTGTGG	3610	False	NA	18	True	AATAAA	-19	NA	4198652	4204034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
ENSMUSG00000024841.9_5416769_5420276_1	chr19	+	1278	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	0	1278	0	-1278	multi-exon	TRUE	canonical	3	703	junction_2	59.7581793564697	2775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTGTCTGAGTGGCTC	1792	False	NA	22	True	ATTAAA	-22	NA	5416768	5420276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ENSMUSG00000024841.9_5416973_5420276_1	chr19	+	1072	6	NNC	ENSMUSG00000024841.9	novel	2556	6	NA	NA	0	-1278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	314.004076406661	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTGTCTGAGTGGCTC	1996	False	NA	22	True	ATTAAA	-22	NA	5416972	5420276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_5417243_5418091_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ENSMUSG00000024841.9_5416973_5420276_2	chr19	+	1074	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	204	1278	0	-1278	multi-exon	FALSE	canonical	3	703	junction_2	59.7581793564697	2485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTGTCTGAGTGGCTC	1996	False	NA	22	True	ATTAAA	-22	NA	5416972	5420276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ENSMUSG00000024841.9_5416973_5421554_1	chr19	+	2352	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	204	0	0	0	multi-exon	FALSE	canonical	3	703	junction_2	59.7581793564697	2736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTTATGAAGAGTT	1996	False	NA	23	True	AATAAA	-40	NA	5416972	5421554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ENSMUSG00000024844.16_5414668_5416673_1	chr19	-	597	2	FSM	ENSMUSG00000024844.16	ENSMUST00000237704.2	743	2	146	0	-39	0	multi-exon	FALSE	canonical	3	1029	junction_1	0	1941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8704	False	NA	-8	True	AATAAA	-15	NA	5416673	5414667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5415187_5416595
ENSMUSG00000024844.16_5414668_5416673_2	chr19	-	736	3	FSM	ENSMUSG00000024844.16	ENSMUST00000025762.16	1261	3	523	2	-39	0	multi-exon	FALSE	canonical	3	4588	junction_2	727	22866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8704	False	NA	-8	True	AATAAA	-15	NA	5416673	5414667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5415187_5415845_5415985_5416595
ENSMUSG00000024845.20_4175979_4181734_1	chr19	+	1046	6	FSM	ENSMUSG00000024845.20	ENSMUST00000130619.11	1615	6	19	550	0	0	multi-exon	FALSE	canonical	3	568	junction_2	76.3952878127964	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGCACTTTCCTGGGCC	4390	False	NA	NA	False	AATAAA	-24	NA	4175978	4181734	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4176200_4177055_4177121_4177548_4177836_4181029_4181075_4181227_4181282_4181360
ENSMUSG00000024847.16_4163756_4171575_1	chr19	-	1969	6	FSM	ENSMUSG00000024847.16	ENSMUST00000025767.14	1261	6	0	-708	0	690	multi-exon	FALSE	canonical	3	269	junction_5	15.3310143173894	1491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCCCTCACTCTTCACTG	3902	False	NA	NA	False	AATAAA	-19	NA	4171575	4163755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
ENSMUSG00000024847.16_4164464_4171575_1	chr19	-	1255	6	NNC	ENSMUSG00000024847.16	novel	1261	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	115.291977171007	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTTGCAGAACTAATC	3902	False	NA	-21	True	TATAAA	-17	NA	4171575	4164463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_4164797_4165080_4165217_4165319_4165497_4165981_4166171_4168086_4168267_4171335
ENSMUSG00000024847.16_4164464_4171575_2	chr19	-	1255	6	NNC	ENSMUSG00000024847.16	novel	1261	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	114.62704741901	1029	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTTGCAGAACTAATC	3902	False	NA	-21	True	TATAAA	-17	NA	4171575	4164463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_4164797_4165080_4165223_4165319_4165491_4165981_4166171_4168086_4168267_4171335
ENSMUSG00000024853.11_5323960_5345450_2	chr19	-	3183	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-14	0	at_least_one_novel_splicesite	TRUE	canonical	2	7	junction_11	511.054427140593	2919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGCTAACTACTTGGA	3899	False	NA	-25	True	AATAAA	-18	NA	5345450	5323959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336680_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ENSMUSG00000024853.11_5324327_5345450_1	chr19	-	2822	21	FSM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	33	367	-14	-367	multi-exon	FALSE	canonical	3	1448	junction_15	340.757138589935	1856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGCGCTCTTGAACCTC	3899	False	NA	-21	True	AATAAA	-24	NA	5345450	5324326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ENSMUSG00000024853.11_5333702_5345450_1	chr19	-	1916	15	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-14	441	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	598.737144636398	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCTGGACTGAATTCAC	3899	False	NA	NA	False	NA	NA	NA	5345450	5333701	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337650_5337937_5338035_5338333_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ENSMUSG00000024853.11_5333702_5345450_2	chr19	-	1917	15	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-14	441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	448.129718829224	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCTGGACTGAATTCAC	3899	False	NA	NA	False	NA	NA	NA	5345450	5333701	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_5333779_5333885_5333970_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ENSMUSG00000024853.11_5341232_5345450_1	chr19	-	745	5	ISM	ENSMUSG00000024853.11	ENSMUST00000235182.2	933	9	-19	3931	-14	0	5prime_fragment	FALSE	canonical	3	1668	junction_1	98.2445927265211	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGGCAGAAGGGAAAAGGTG	3899	False	NA	-75	True	NA	NA	NA	5345450	5341231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ENSMUSG00000024856.11_4147401_4149011_1	chr19	+	855	4	FSM	ENSMUSG00000024856.11	ENSMUST00000025779.11	1080	4	219	6	0	1	multi-exon	FALSE	canonical	3	620	junction_3	36.1754981536767	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCAGCCTTTCTGTGT	7095	False	NA	28	True	AATAAA	-17	NA	4147400	4149011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4147508_4147816_4147918_4148004_4148138_4148497
ENSMUSG00000024858.15_4337065_4356058_1	chr19	-	2149	21	FSM	ENSMUSG00000024858.15	ENSMUST00000088737.11	3376	21	192	1035	0	-418	multi-exon	FALSE	canonical	3	202	junction_18	28.8679753360017	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTATTTGTTTTCCC	NA	False	NA	-29	True	TATAAA	-22	NA	4356058	4337064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ENSMUSG00000024863.7_30215437_30217087_1	chr19	+	714	3	NNC	ENSMUSG00000024863.7	novel	1089	6	NA	NA	5095	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0.5	39	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTGTGCTCTGTGGGG	NA	False	NA	NA	False	AATAAA	-22	NA	30215436	30217087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_30215545_30215786_30215856_30216550
ENSMUSG00000024866.11_4036570_4040007_1	chr19	+	1281	8	NIC	ENSMUSG00000024866.11	novel	1284	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	12.795088343356	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACAGTTCTTGTTCTTTG	NA	False	NA	5	True	TATAAA	-19	NA	4036569	4040007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_4036612_4036827_4036952_4037050_4037306_4037730_4037924_4038137_4038232_4038397_4038506_4038605_4038716_4039652
ENSMUSG00000024866.11_4038288_4040007_1	chr19	+	683	3	ISM	ENSMUSG00000024866.11	ENSMUST00000054030.8	1505	6	1627	0	1085	0	3prime_fragment	FALSE	canonical	3	46	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACAGTTCTTGTTCTTTG	NA	False	NA	5	True	TATAAA	-19	NA	4038287	4040007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_+_4038506_4038605_4038716_4039652
ENSMUSG00000024875.6_5138588_5142533_1	chr19	+	1097	8	FSM	ENSMUSG00000024875.6	ENSMUST00000025811.6	1488	8	15	376	0	0	multi-exon	FALSE	canonical	3	484	junction_7	32.2509294281512	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGACCCTGGTTCC	NA	False	NA	26	True	NA	NA	NA	5138587	5142533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
ENSMUSG00000024878.10_24897000_24938965_1	chr19	-	2209	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	0	-280	0	280	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTGTGTTAATTTT	NA	False	NA	-8	True	ATTAAA	-14	NA	24938965	24896999	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUSG00000024878.10_24897791_24938965_1	chr19	-	1418	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	0	511	0	-511	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATCCTCTGGAGGTTTTT	NA	False	NA	-32	True	AGTAAA	-32	NA	24938965	24897790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUSG00000024885.10_3963491_3980876_1	chr19	-	1972	10	NNC	ENSMUSG00000024885.10	novel	1924	10	NA	NA	-1068	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	2.58198889747161	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACAGGTGTCTTGTCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	3980876	3963490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602_3968990_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738_3973902_3980715
ENSMUSG00000024889.6_4672619_4675300_1	chr19	-	1223	7	ISM	ENSMUSG00000024889.6	ENSMUST00000225476.2	1455	8	369	0	0	0	3prime_fragment	FALSE	canonical	3	51	junction_4	115.983715332034	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGGAACCTTGGGAC	NA	False	NA	-9	True	ATTAAA	-21	NA	4675300	4672618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674687_4674792_4675040_4675125_4675220
ENSMUSG00000024889.6_4672619_4675669_1	chr19	-	1439	8	NIC	ENSMUSG00000024889.6	novel	1455	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	137.716804956211	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGGAACCTTGGGAC	NA	False	NA	-9	True	ATTAAA	-21	NA	4675669	4672618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_4673271_4673528_4673605_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675121_4675220_4675324_4675460
ENSMUSG00000024889.6_4672619_4675669_2	chr19	-	1400	8	NIC	ENSMUSG00000024889.6	novel	1455	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_4	123.357618495237	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGGAACCTTGGGAC	NA	False	NA	-9	True	ATTAAA	-21	NA	4675669	4672618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674180_4674712_4674792_4675040_4675125_4675220_4675324_4675460
ENSMUSG00000024891.7_5074142_5081993_1	chr19	+	2223	11	NIC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	23.4795655837156	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACGGATTCCTGGAGTGTT	4312	False	NA	14	True	ATTAAA	-15	NA	5074141	5081993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
ENSMUSG00000024902.6_5012391_5014976_1	chr19	+	778	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	216	2051	0	4	multi-exon	FALSE	canonical	3	572	junction_2	14.5859521458148	3342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGCTTCTCTCCTGAG	3759	False	NA	14	True	AATAAA	-17	NA	5012390	5014976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
ENSMUSG00000024902.6_5012391_5015165_1	chr19	+	967	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	216	1862	0	193	multi-exon	FALSE	canonical	3	572	junction_2	14.5859521458148	3416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTCTGATTCATGGT	3759	False	NA	NA	False	NA	NA	NA	5012390	5015165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
ENSMUSG00000024908.16_3560946_3625720_1	chr19	-	1948	7	ISM	ENSMUSG00000024908.16	ENSMUST00000025846.16	4841	23	0	56018	0	549	5prime_fragment	FALSE	canonical	3	325	junction_6	70.1492456599974	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTGGTTTGGG	NA	False	NA	NA	False	NA	NA	NA	3625720	3560945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ENSMUSG00000024911.8_5510644_5515080_1	chr19	+	1509	9	NIC	ENSMUSG00000024911.8	novel	1215	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	40	junction_5	37.3019771593946	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCCTTGTTCCAGGT	NA	False	NA	18	True	AATAAA	-18	NA	5510643	5515080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513354_5513631_5513741_5513814_5514244_5514361_5514460_5514952
ENSMUSG00000024911.8_5510644_5515080_2	chr19	+	1488	9	NIC	ENSMUSG00000024911.8	novel	1209	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	126	junction_5	11.4455231422596	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCCTTGTTCCAGGT	NA	False	NA	18	True	AATAAA	-18	NA	5510643	5515080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5514244_5514361_5514460_5514952
ENSMUSG00000024911.8_5514095_5515080_1	chr19	+	277	2	NIC	ENSMUSG00000024911.8	novel	721	4	NA	NA	-213	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCCTTGTTCCAGGT	3179	False	NA	18	True	AATAAA	-18	NA	5514094	5515080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_5514244_5514952
ENSMUSG00000024914.17_5472837_5474807_1	chr19	-	794	7	FSM	ENSMUSG00000024914.17	ENSMUST00000025853.16	992	7	200	-2	0	0	multi-exon	TRUE	canonical	3	999	junction_1	76.7282361469506	380	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTTTGGTTTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	5474807	5472836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
ENSMUSG00000024925.12_5651901_5652964_1	chr19	+	485	4	NNC	ENSMUSG00000024925.12	novel	1126	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	123.874488450564	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGTCTGTGGGCACC	5045	False	NA	6	True	AATAAA	-15	NA	5651900	5652964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_5652109_5652220_5652265_5652477_5652598_5652851
ENSMUSG00000024925.12_5651901_5652964_2	chr19	+	434	4	NNC	ENSMUSG00000024925.12	novel	1126	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	110.671686633132	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGTCTGTGGGCACC	5045	False	NA	6	True	AATAAA	-15	NA	5651900	5652964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_5651928_5652228_5652403_5652477_5652598_5652851
ENSMUSG00000024925.12_5651901_5652964_4	chr19	+	434	4	NNC	ENSMUSG00000024925.12	novel	1126	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.671686633132	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGTCTGTGGGCACC	5045	False	NA	6	True	AATAAA	-15	NA	5651900	5652964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_5651923_5652223_5652403_5652477_5652598_5652851
ENSMUSG00000024925.12_5651901_5652964_6	chr19	+	437	4	NNC	ENSMUSG00000024925.12	novel	1126	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.671686633132	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGTCTGTGGGCACC	5045	False	NA	6	True	AATAAA	-15	NA	5651900	5652964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_5651934_5652231_5652403_5652477_5652598_5652851
ENSMUSG00000024925.12_5651901_5652964_8	chr19	+	877	3	FSM	ENSMUSG00000024925.12	ENSMUST00000155639.2	771	3	-102	-4	0	2	multi-exon	FALSE	canonical	3	241	junction_2	34.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGTCTGTGGGCACC	5045	False	NA	6	True	AATAAA	-15	NA	5651900	5652964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5652109_5652220_5652403_5652477
ENSMUSG00000024925.12_5651901_5652964_9	chr19	+	479	4	NNC	ENSMUSG00000024925.12	novel	1126	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.671686633132	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGTCTGTGGGCACC	5045	False	NA	6	True	AATAAA	-15	NA	5651900	5652964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_5651965_5652220_5652403_5652477_5652598_5652851
ENSMUSG00000024925.12_5653044_5660079_1	chr19	+	1966	14	NIC	ENSMUSG00000024925.12	novel	1126	4	NA	NA	606	3032	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCCCCTCTGGGAGACG	6188	False	NA	NA	False	NA	NA	NA	5653043	5660079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ENSMUSG00000024926.11_5651901_5653150_1	chr19	-	809	4	NIC	ENSMUSG00000024926.11	novel	839	2	NA	NA	844	1141	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAACGCAGGGCCTGT	8493	False	NA	NA	False	NA	NA	NA	5653150	5651900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_5652109_5652220_5652403_5652477_5652598_5652851
ENSMUSG00000024926.11_5653044_5660079_1	chr19	-	1810	13	FSM	ENSMUSG00000024926.11	ENSMUST00000236229.2	1386	13	-22	-402	0	0	multi-exon	FALSE	canonical	3	222	junction_9	61.0948147463342	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3626	False	NA	-5	True	AATAAA	-16	NA	5660079	5653043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ENSMUSG00000024927.9_5687747_5698158_1	chr19	+	2480	11	FSM	ENSMUSG00000024927.9	ENSMUST00000025867.6	2716	11	236	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	8.59069263796581	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	False	NA	10	True	AATAAA	-16	NA	5687746	5698158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
ENSMUSG00000024935.12_28812535_28889448_1	chr19	+	1827	12	FSM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	61	1912	0	171	multi-exon	FALSE	canonical	3	74	junction_8	5.75246982529323	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGACTTTATAGCCTTG	NA	False	NA	NA	False	GATAAA	-23	NA	28812534	28889448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
ENSMUSG00000024935.12_28812535_28890038_1	chr19	+	2417	12	FSM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	61	1322	0	0	multi-exon	FALSE	canonical	3	74	junction_8	5.75246982529323	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCAGCTTCCCTTGTACT	NA	False	NA	4	True	AATGAA	-15	NA	28812534	28890038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
ENSMUSG00000024940.12_5808455_5821426_1	chr19	+	2634	17	NIC	ENSMUSG00000024940.12	novel	2099	9	NA	NA	895	12866	intron_retention	FALSE	non_canonical	0	0	junction_1	0	308	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCGAGGGCGGAGCCAGT	4686	False	NA	NA	False	NA	NA	NA	5808454	5821426	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ENSMUSG00000024944.7_6184416_6191170_1	chr19	-	875	5	FSM	ENSMUSG00000024944.7	ENSMUST00000025893.7	1286	5	408	3	0	0	multi-exon	FALSE	canonical	3	648	junction_1	48.4890451545501	3135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGGCTGAGCCATTTG	NA	False	NA	-11	True	AATAAA	-15	NA	6191170	6184415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6184832_6186008_6186090_6187507_6187671_6187759_6187871_6191066
ENSMUSG00000024944.7_6184608_6191170_1	chr19	-	683	5	FSM	ENSMUSG00000024944.7	ENSMUST00000025893.7	1286	5	408	195	0	-192	multi-exon	FALSE	canonical	3	648	junction_1	48.4890451545501	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCTGCTGCTGCTAT	NA	False	NA	NA	False	NA	NA	NA	6191170	6184607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6184832_6186008_6186090_6187507_6187671_6187759_6187871_6191066
ENSMUSG00000024944.7_6187174_6191170_1	chr19	-	712	3	ISM	ENSMUSG00000024944.7	ENSMUST00000134821.2	2305	4	0	2770	0	326	5prime_fragment	FALSE	canonical	3	728	junction_2	28	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAAGACTTGTCTTGTTG	NA	False	NA	-2	True	NA	NA	NA	6191170	6187173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_6187671_6187759_6187871_6191066
ENSMUSG00000024949.18_6413952_6426067_1	chr19	+	2128	13	FSM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	232	1993	0	257	multi-exon	FALSE	canonical	3	714	junction_12	157.964724437663	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTTGGTCTCTTATAAA	834	False	NA	42	True	AATATA	-14	NA	6413951	6426067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ENSMUSG00000024949.18_6413952_6427226_1	chr19	+	570	3	NNC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	606	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	834	False	NA	15	True	AATAAA	-15	NA	6413951	6427226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_6414149_6415693_6415747_6426906
ENSMUSG00000024949.18_6413952_6427226_2	chr19	+	3287	13	FSM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	232	834	0	0	multi-exon	FALSE	canonical	3	714	junction_12	157.964724437663	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	834	False	NA	15	True	AATAAA	-15	NA	6413951	6427226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ENSMUSG00000024953.18_6884074_6887474_1	chr19	-	823	6	NNC	ENSMUSG00000024953.18	novel	1262	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_5	187.679514065867	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	False	NA	-9	True	AATAAA	-21	NA	6887474	6884073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6887265
ENSMUSG00000024958.14_6919229_6929261_1	chr19	-	1446	4	NIC	ENSMUSG00000024958.14	novel	1490	6	NA	NA	-9413	-2276	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACCATCTTGGTTGTGGG	5291	False	NA	NA	False	NA	NA	NA	6929261	6919228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_6919809_6920234_6920415_6928007_6928199_6928766
ENSMUSG00000024959.15_6919932_6929261_1	chr19	+	927	4	FSM	ENSMUSG00000024959.15	ENSMUST00000113423.10	990	4	63	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	15.9234278833282	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	9384	False	NA	10	True	AATAAA	-15	NA	6919931	6929261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6919993_6920234_6920415_6928007_6928199_6928766
ENSMUSG00000024962.14_6959841_6962757_1	chr19	-	424	2	ISM	ENSMUSG00000024962.14	ENSMUST00000130048.8	1158	7	2240	0	1751	0	3prime_fragment	FALSE	canonical	3	317	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	7020	False	NA	-1	True	GATAAA	-17	NA	6962757	6959840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_6960236_6962728
ENSMUSG00000024962.14_6959841_6964786_1	chr19	-	1048	7	FSM	ENSMUSG00000024962.14	ENSMUST00000025914.7	1281	7	233	0	211	0	multi-exon	FALSE	canonical	3	141	junction_2	52.2323867176508	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	4991	False	NA	-1	True	GATAAA	-17	NA	6964786	6959840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
ENSMUSG00000024963.13_6965279_6969871_1	chr19	-	1167	5	NIC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	188	junction_2	20.6942020865749	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9276	False	NA	-4	True	AATAAA	-17	NA	6969871	6965278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_6965477_6965556_6965644_6966790_6967234_6968085_6968180_6969526
ENSMUSG00000024965.10_6973540_6976412_1	chr19	-	1101	7	NIC	ENSMUSG00000024965.10	novel	2856	14	NA	NA	20301	2786	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATCCGGACCTGAACACG	9040	False	NA	NA	False	NA	NA	NA	6976412	6973539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_6973893_6974063_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976025_6976137_6976259
ENSMUSG00000024965.10_6973540_6976412_2	chr19	-	1053	7	NNC	ENSMUSG00000024965.10	novel	2856	14	NA	NA	20301	2786	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	240	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATCCGGACCTGAACACG	9040	False	NA	NA	False	NA	NA	NA	6976412	6973539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6973893_6974063_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976073_6976137_6976259
ENSMUSG00000024965.10_6973540_6976412_3	chr19	-	931	6	NIC	ENSMUSG00000024965.10	novel	2856	14	NA	NA	20301	2786	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATCCGGACCTGAACACG	9040	False	NA	NA	False	NA	NA	NA	6976412	6973539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_6973893_6974063_6974146_6975559_6975735_6975876_6975934_6976025_6976137_6976259
ENSMUSG00000024965.10_6976347_6977331_1	chr19	-	757	3	NNC	ENSMUSG00000024965.10	novel	2988	14	NA	NA	19382	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	9.5	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATCTTTCTTCTTCCTCCT	8121	False	NA	-8	True	AATAAA	-17	NA	6977331	6976346	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6976889_6977006_6977149_6977258
ENSMUSG00000024965.10_6976347_6991530_1	chr19	-	1780	11	ISM	ENSMUSG00000024965.10	ENSMUST00000040772.9	2587	15	5307	21	5183	0	3prime_fragment	FALSE	canonical	3	13	junction_3	4.73392015141785	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATCTTTCTTCTTCCTCCT	7905	False	NA	-8	True	AATAAA	-17	NA	6991530	6976346	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_6976889_6977006_6977149_6979124_6979250_6979580_6979821_6979937_6980045_6980189_6980315_6980398_6980449_6980536_6980672_6980835_6980944_6991215_6991319_6991427
ENSMUSG00000024966.10_6998070_7017335_1	chr19	-	2099	14	NNC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	905.222415377445	3729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3763	False	NA	-8	True	AATAAA	-29	NA	7017335	6998069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999668_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ENSMUSG00000024966.10_6998070_7017335_2	chr19	-	2103	14	NNC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	900.645961479312	4943	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3763	False	NA	-8	True	AATAAA	-29	NA	7017335	6998069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6998540_6999017_6999191_6999399_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ENSMUSG00000024966.10_6998070_7017335_3	chr19	-	2084	13	NNC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	940.793500042503	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3763	False	NA	-8	True	AATAAA	-29	NA	7017335	6998069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6998540_6999017_6999191_6999394_6999499_7002669_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ENSMUSG00000024966.10_6998070_7017335_4	chr19	-	1891	15	NNC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	881.574727405454	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3763	False	NA	-8	True	AATAAA	-29	NA	7017335	6998069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6998138_6998354_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ENSMUSG00000024966.10_6998070_7017335_5	chr19	-	1185	10	NNC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1050.68564327664	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3763	False	NA	-8	True	AATAAA	-29	NA	7017335	6998069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6998105_7003708_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ENSMUSG00000024966.10_6998070_7017335_6	chr19	-	2102	14	NNC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	911.595687914797	3201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3763	False	NA	-8	True	AATAAA	-29	NA	7017335	6998069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6998530_6999013_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ENSMUSG00000024966.10_6998070_7017335_8	chr19	-	2102	14	NNC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	914.822723474125	4744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3763	False	NA	-8	True	AATAAA	-29	NA	7017335	6998069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003751_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ENSMUSG00000024966.10_6998070_7017362_1	chr19	-	2129	14	NNC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	914.822723474125	5183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3736	False	NA	-8	True	AATAAA	-29	NA	7017362	6998069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003751_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ENSMUSG00000024966.10_6998070_7017362_3	chr19	-	1130	7	NNC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	-27	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1229.34513958539	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3736	False	NA	-8	True	AATAAA	-29	NA	7017362	6998069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6998376_7006556_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ENSMUSG00000024968.15_7244690_7252590_1	chr19	+	2351	13	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	300.802676184904	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7244689	7252590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_7244790_7246215_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ENSMUSG00000024970.6_7335051_7351702_1	chr19	-	1168	4	ISM	ENSMUSG00000024970.6	ENSMUST00000025924.4	3152	6	8657	1223	0	0	3prime_fragment	FALSE	canonical	3	309	junction_2	12.684198393627	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGGGCTATCATT	NA	False	NA	NA	False	AATAAA	-21	NA	7351702	7335050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660
ENSMUSG00000024976.15_53933304_54020497_1	chr19	+	2789	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	0	-801	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTGCAGATCCACAAAAAT	3925	False	NA	NA	False	NA	NA	NA	53933303	54020497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ENSMUSG00000024976.15_53933304_54021298_1	chr19	+	3590	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGATTTTTGCTTTTC	3925	False	NA	NA	False	ATTAAA	-20	NA	53933303	54021298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ENSMUSG00000024976.15_53933304_54021564_1	chr19	+	3856	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGTGTGGTGTTT	3925	False	NA	23	True	TATAAA	-26	NA	53933303	54021564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ENSMUSG00000024981.7_55242375_55285060_1	chr19	+	2577	22	FSM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	574	1092	574	950	multi-exon	TRUE	canonical	3	56	junction_1	11.2473730871055	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGCCTGCAGTCTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	55242374	55285060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ENSMUSG00000024983.11_55304759_55612402_1	chr19	+	838	8	FSM	ENSMUSG00000024983.11	ENSMUST00000095950.3	3405	8	-24	2591	0	-2591	multi-exon	FALSE	canonical	3	70	junction_7	16.8219972606327	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCACATGAATCATTCTT	NA	False	NA	NA	False	GATAAA	-38	NA	55304758	55612402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248
ENSMUSG00000024983.11_55304759_55612402_2	chr19	+	849	8	NNC	ENSMUSG00000024983.11	novel	3405	8	NA	NA	0	-2591	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	37.8940520883353	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCACATGAATCATTCTT	NA	False	NA	NA	False	GATAAA	-38	NA	55304758	55612402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487748_55612248
ENSMUSG00000024989.16_38043490_38062870_1	chr19	+	2522	10	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	96	junction_2	88.367917758024	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043489	38062870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_38043530_38045857_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ENSMUSG00000024989.16_38043490_38062870_2	chr19	+	2644	10	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	109.160432391962	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043489	38062870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_38043766_38045857_38045901_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ENSMUSG00000024989.16_38043490_38062870_3	chr19	+	2498	10	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	113	junction_2	84.0640555296898	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043489	38062870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_38043530_38045857_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ENSMUSG00000024991.9_60750277_60779096_1	chr19	-	4418	22	FSM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	-15	722	0	0	multi-exon	FALSE	canonical	0	0	junction_17	309.066534016512	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAACTAAAAA	8739	False	NA	-70	True	NA	NA	NA	60779096	60750276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ENSMUSG00000024993.16_60800049_60824673_1	chr19	+	2335	9	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	88.7623230881211	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGATGTCTTTTCATT	NA	False	NA	NA	False	ATTAAA	-21	NA	60800048	60824673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_60800112_60803029_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ENSMUSG00000024999.8_38777575_38807681_1	chr19	-	2974	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	0	1003	0	-1003	multi-exon	FALSE	canonical	3	233	junction_1	18.6711006638602	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCATGGTTTTTTTTTTT	2288	False	NA	-5	True	AATAAA	-24	NA	38807681	38777574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ENSMUSG00000025001.12_38919359_38956721_1	chr19	+	3089	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	0	-2774	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_20	405.297527956686	1510	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTCACATTATTTT	NA	False	NA	14	True	AATAAA	-15	NA	38919358	38956721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953855_38953928_38956176
ENSMUSG00000025008.16_40585106_40600677_1	chr19	-	2527	14	FSM	ENSMUSG00000025008.16	ENSMUST00000025981.15	2743	14	0	216	0	-216	multi-exon	FALSE	canonical	3	33	junction_10	4.39337855732112	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTATGTCCTTTTCTCAC	NA	False	NA	NA	False	NA	NA	NA	40600677	40585105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_40585987_40591248_40591387_40593749_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
ENSMUSG00000025024.8_53367645_53379009_1	chr19	-	2130	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	0	-182	0	176	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	1676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTTAGTAAACTGAAATT	NA	False	NA	NA	False	ATTAAA	-16	NA	53379009	53367644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
ENSMUSG00000025024.8_53367827_53379009_1	chr19	-	1943	6	NNC	ENSMUSG00000025024.8	novel	1948	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	90.8748590095192	1470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCAGTGTGTTAACAAAG	NA	False	NA	-8	True	AATAAA	-17	NA	53379009	53367826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_53369033_53369671_53369821_53371987_53372150_53372884_53373028_53377733_53377854_53378846
ENSMUSG00000025024.8_53367827_53379009_2	chr19	-	1942	6	NNC	ENSMUSG00000025024.8	novel	1948	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.7816404766178	1290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCAGTGTGTTAACAAAG	NA	False	NA	-8	True	AATAAA	-17	NA	53379009	53367826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_53369027_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
ENSMUSG00000025024.8_53368311_53379009_1	chr19	-	1459	6	NNC	ENSMUSG00000025024.8	novel	1948	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	90.8748590095192	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTAGGATGTGCGCCCC	NA	False	NA	-9	True	ATTAAA	-15	NA	53379009	53368310	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_53369033_53369671_53369821_53371987_53372150_53372884_53373028_53377733_53377854_53378846
ENSMUSG00000025024.8_53368311_53379009_2	chr19	-	1464	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	0	484	0	0	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTAGGATGTGCGCCCC	NA	False	NA	-9	True	ATTAAA	-15	NA	53379009	53368310	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
ENSMUSG00000025025.15_53318127_53361724_1	chr19	+	2196	6	FSM	ENSMUSG00000025025.15	ENSMUST00000111737.3	2340	6	283	-139	0	0	multi-exon	FALSE	canonical	3	157	junction_1	29.7859027058103	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGTGTGTTAATGT	4697	False	NA	18	True	AATAAA	-23	NA	53318126	53361724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_53318152_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
ENSMUSG00000025027.19_52979611_53026999_1	chr19	-	2341	20	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	353.896278840687	897	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	5132	False	NA	0	True	AATAAA	-17	NA	53026999	52979610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988887_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
ENSMUSG00000025027.19_52979611_53026999_10	chr19	-	2344	20	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	350.744210764827	761	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	5132	False	NA	0	True	AATAAA	-17	NA	53026999	52979610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001929_53003037_53003106_53013689_53013815_53026944
ENSMUSG00000025027.19_52979611_53026999_2	chr19	-	2343	20	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	353.211314494568	527	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	5132	False	NA	0	True	AATAAA	-17	NA	53026999	52979610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992239_52993190_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
ENSMUSG00000025027.19_52979611_53026999_3	chr19	-	2429	21	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	343.008786330613	470	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	5132	False	NA	0	True	AATAAA	-17	NA	53026999	52979610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988825_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ENSMUSG00000025027.19_52979611_53026999_4	chr19	-	2429	21	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_17	343.256882669525	606	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	5132	False	NA	0	True	AATAAA	-17	NA	53026999	52979610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001929_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ENSMUSG00000025027.19_52979611_53026999_5	chr19	-	2430	21	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	337.852171814834	759	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	5132	False	NA	0	True	AATAAA	-17	NA	53026999	52979610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026949
ENSMUSG00000025027.19_52979611_53026999_6	chr19	-	2429	21	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	350.541309976442	947	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	5132	False	NA	0	True	AATAAA	-17	NA	53026999	52979610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003100_53013689_53013815_53020439_53020529_53026944
ENSMUSG00000025027.19_52979611_53026999_7	chr19	-	2430	21	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	350.59285146734	853	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	5132	False	NA	0	True	AATAAA	-17	NA	53026999	52979610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988887_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ENSMUSG00000025027.19_52979611_53026999_8	chr19	-	2340	20	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	64	junction_3	342.347096710398	891	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	5132	False	NA	0	True	AATAAA	-17	NA	53026999	52979610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_52980151_52983851_52983951_52984679_52984751_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
ENSMUSG00000025027.19_52979611_53026999_9	chr19	-	2428	21	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	349.784633739105	470	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	5132	False	NA	0	True	AATAAA	-17	NA	53026999	52979610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992239_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ENSMUSG00000025027.19_52979611_53027072_1	chr19	-	2413	20	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	353.910242623458	1251	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	5059	False	NA	0	True	AATAAA	-17	NA	53027072	52979610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003100_53013689_53013815_53026944
ENSMUSG00000025036.8_46561804_46583731_1	chr19	+	1604	12	FSM	ENSMUSG00000025036.8	ENSMUST00000026011.8	3205	12	-2	1603	0	-1603	multi-exon	FALSE	canonical	3	36	junction_10	6.85384611817119	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAAACCACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	46561803	46583731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
ENSMUSG00000025036.8_46561804_46585337_1	chr19	+	1411	13	NIC	ENSMUSG00000025036.8	novel	3205	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_12	13.4440713906002	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTGTCTGCAAACTAA	NA	False	NA	18	True	AATAAA	-18	NA	46561803	46585337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110_46583308_46585106
ENSMUSG00000025038.8_16998288_17117545_1	chrX	-	2130	13	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68062	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	30.7679486912382	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGACCATTTTATTGTA	NA	False	NA	-9	True	ATTAAA	-17	NA	17117545	16998287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17117502
ENSMUSG00000025038.8_16998288_17117545_2	chrX	-	2281	14	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68062	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_13	14.945265027612	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGACCATTTTATTGTA	NA	False	NA	-9	True	ATTAAA	-17	NA	17117545	16998287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17109665_17109817_17117502
ENSMUSG00000025038.8_16998288_17117545_3	chrX	-	2303	14	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68062	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	30.5403022115302	539	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGACCATTTTATTGTA	NA	False	NA	-9	True	ATTAAA	-17	NA	17117545	16998287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17109665_17109839_17117502
ENSMUSG00000025038.8_16998409_17117545_1	chrX	-	2160	14	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68062	-121	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_13	14.945265027612	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTTTGTATTAAATGGA	NA	False	NA	NA	False	AATAAA	-36	NA	17117545	16998408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17109665_17109817_17117502
ENSMUSG00000025040.14_17422803_17438492_1	chrX	-	1911	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	72	0	0	0	multi-exon	TRUE	canonical	3	209	junction_3	21.435951110226	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGCTTATATATCC	NA	False	NA	-9	True	AATAAA	-21	NA	17438492	17422802	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
ENSMUSG00000025040.14_17423763_17438492_1	chrX	-	951	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	72	960	0	0	multi-exon	FALSE	canonical	3	209	junction_3	21.435951110226	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTATGGCTGATTTTTT	NA	False	NA	-22	True	ATTAAA	-18	NA	17438492	17423762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
ENSMUSG00000025041.18_46876791_46950747_1	chr19	-	2205	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	0	1523	0	-524	multi-exon	TRUE	canonical	3	118	junction_5	15.8666589126981	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAGTCAGCCGTCTGTTG	7192	False	NA	-3	True	AATACA	-16	NA	46950747	46876790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ENSMUSG00000025041.18_46877101_46950747_1	chr19	-	1895	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	0	1833	0	346	multi-exon	FALSE	canonical	3	118	junction_5	15.8666589126981	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTTCAGTTTTGTGTAT	7192	False	NA	-25	True	TTTAAA	-15	NA	46950747	46877100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ENSMUSG00000025049.7_47071903_47079086_1	chr19	+	370	4	NIC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	15718	7168	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	29684	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCTCCCCGCACGCGAC	4158	False	NA	NA	False	NA	NA	NA	47071902	47079086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_47072009_47074393_47074487_47074572_47074669_47079011
ENSMUSG00000025056.5_85235370_85239553_1	chrX	+	727	2	NNC	ENSMUSG00000025056.5	novel	1808	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTGGAGAGTTTTCTTG	NA	False	NA	11	True	AATAAA	-23	NA	85235369	85239553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_85235500_85238956
ENSMUSG00000025056.5_85236429_85239553_1	chrX	+	749	2	FSM	ENSMUSG00000025056.5	ENSMUST00000026036.5	1808	2	1059	0	1059	0	multi-exon	FALSE	canonical	3	839	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTGGAGAGTTTTCTTG	NA	False	NA	11	True	AATAAA	-23	NA	85236428	85239553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_85236581_85238956
ENSMUSG00000025059.17_84746201_84820230_1	chrX	-	3574	20	FSM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	13	658	0	-658	multi-exon	TRUE	canonical	3	125	junction_19	13.2977827073068	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	-5	True	AATAAA	-19	NA	84820230	84746200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ENSMUSG00000025059.17_84746201_84820230_2	chrX	-	3487	19	FSM	ENSMUSG00000025059.17	ENSMUST00000026039.15	4340	19	195	658	0	-658	multi-exon	FALSE	canonical	3	19	junction_1	33.6576812358314	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	-5	True	AATAAA	-19	NA	84820230	84746200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_84748003_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ENSMUSG00000025059.17_84746917_84820230_1	chrX	-	2858	20	FSM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	13	1374	0	-1374	multi-exon	FALSE	canonical	3	125	junction_19	13.2977827073068	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTTTCCATATTTGA	NA	False	NA	-5	True	AATAAA	-15	NA	84820230	84746916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ENSMUSG00000025059.17_84747815_84820230_2	chrX	-	1960	20	FSM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	13	2272	0	-2272	multi-exon	FALSE	canonical	3	125	junction_19	13.2977827073068	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCTCCAGAAACATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	84820230	84747814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ENSMUSG00000025066.11_47720121_47724027_1	chr19	+	1600	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	915.276734108324	2195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCATATCCTTATTTC	NA	False	NA	68	True	ACTAAA	-21	NA	47720120	47724027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_47720261_47721076_47721192_47721240_47721428_47721957_47722351_47723262
ENSMUSG00000025066.11_47720121_47724027_10	chr19	+	1604	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	786.61442270022	4965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCATATCCTTATTTC	NA	False	NA	68	True	ACTAAA	-21	NA	47720120	47724027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_47720261_47721068_47721192_47721244_47721428_47721957_47722351_47723262
ENSMUSG00000025066.11_47720121_47724027_11	chr19	+	1552	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	915.276734108324	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCATATCCTTATTTC	NA	False	NA	68	True	ACTAAA	-21	NA	47720120	47724027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_47720261_47721076_47721192_47721288_47721428_47721957_47722351_47723262
ENSMUSG00000025066.11_47720121_47724027_2	chr19	+	1464	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	786.182350030831	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCATATCCTTATTTC	NA	False	NA	68	True	ACTAAA	-21	NA	47720120	47724027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_47720261_47721068_47721192_47721384_47721428_47721957_47722351_47723262
ENSMUSG00000025066.11_47720121_47724027_3	chr19	+	1607	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	891.437427697536	4292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCATATCCTTATTTC	NA	False	NA	68	True	ACTAAA	-21	NA	47720120	47724027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_47720261_47721068_47721192_47721240_47721428_47721957_47722351_47723263
ENSMUSG00000025066.11_47720121_47724027_4	chr19	+	1565	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	786.61442270022	1911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCATATCCTTATTTC	NA	False	NA	68	True	ACTAAA	-21	NA	47720120	47724027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_47720261_47721068_47721192_47721283_47721428_47721957_47722351_47723262
ENSMUSG00000025066.11_47720121_47724027_5	chr19	+	1560	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	786.61442270022	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCATATCCTTATTTC	NA	False	NA	68	True	ACTAAA	-21	NA	47720120	47724027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_47720261_47721068_47721192_47721288_47721428_47721957_47722351_47723262
ENSMUSG00000025066.11_47720121_47724027_6	chr19	+	1552	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	915.276734108324	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCATATCCTTATTTC	NA	False	NA	68	True	ACTAAA	-21	NA	47720120	47724027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_47720261_47721076_47721144_47721240_47721428_47721957_47722351_47723262
ENSMUSG00000025066.11_47720121_47724027_7	chr19	+	1560	6	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	889.229014371439	2632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCATATCCTTATTTC	NA	False	NA	68	True	ACTAAA	-21	NA	47720120	47724027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_47720261_47721068_47721117_47721164_47721192_47721240_47721428_47721957_47722351_47723262
ENSMUSG00000025066.11_47720121_47724027_8	chr19	+	1512	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	786.61442270022	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCATATCCTTATTTC	NA	False	NA	68	True	ACTAAA	-21	NA	47720120	47724027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_47720261_47721068_47721192_47721336_47721428_47721957_47722351_47723262
ENSMUSG00000025066.11_47720121_47724027_9	chr19	+	1608	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	786.61442270022	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCATATCCTTATTTC	NA	False	NA	68	True	ACTAAA	-21	NA	47720120	47724027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_47720261_47721068_47721144_47721192_47721428_47721957_47722351_47723262
ENSMUSG00000025068.9_47843477_47853006_1	chr19	+	891	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	68	223	0	0	multi-exon	FALSE	canonical	3	277	junction_4	32.103582354622	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCAGGGCCCCACTCCTG	8536	False	NA	58	True	NA	NA	NA	47843476	47853006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
ENSMUSG00000025077.14_56533526_56536459_1	chr19	-	1674	3	ISM	ENSMUSG00000025077.15	ENSMUST00000182059.3	4109	10	25	15925	25	-5083	5prime_fragment	FALSE	canonical	3	162	junction_1	57	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGACAGCAGCCTAGAAG	8190	False	NA	NA	False	NA	NA	NA	56536459	56533525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_56534079_56535068_56536136_56536405
ENSMUSG00000025077.14_56533526_56536669_1	chr19	-	1884	3	ISM	ENSMUSG00000025077.15	ENSMUST00000182059.3	4109	10	-185	15925	6	-5083	5prime_fragment	FALSE	canonical	3	162	junction_1	57	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGACAGCAGCCTAGAAG	7980	False	NA	NA	False	NA	NA	NA	56536669	56533525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_56534079_56535068_56536136_56536405
ENSMUSG00000025086.14_57441366_57476839_1	chr19	+	1169	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	22	2598	0	1390	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATCTTCCCTTAGTCTT	NA	False	NA	NA	False	GATAAA	-14	NA	57441365	57476839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
ENSMUSG00000025086.14_57441366_57477342_1	chr19	+	1672	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	22	2095	0	1893	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCCTGCCTGTTCGTT	NA	False	NA	13	True	ATTAAA	-2	NA	57441365	57477342	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
ENSMUSG00000025086.14_57441366_57477446_1	chr19	+	1776	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	22	1991	0	-1991	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGAGTGCTTCATT	NA	False	NA	117	True	NA	NA	NA	57441365	57477446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
ENSMUSG00000025090.10_58500424_58516179_1	chr19	+	839	5	ISM	ENSMUSG00000025090.10	ENSMUST00000235305.2	855	7	0	25338	0	-25281	5prime_fragment	FALSE	canonical	3	10	junction_1	12.8135670287395	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGTTTTGTTATGAGC	NA	False	NA	NA	False	AATAAA	-20	NA	58500423	58516179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_+_58500459_58500742_58500868_58501047_58501134_58514279_58514397_58515703
ENSMUSG00000025102.15_81430031_81439217_1	chr7	-	752	5	NNC	ENSMUSG00000025102.15	novel	405	4	NA	NA	0	1899	at_least_one_novel_splicesite	TRUE	canonical	2	9	junction_4	123.025149867822	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGCCTACAACAAAATG	NA	False	NA	NA	False	NA	NA	NA	81439217	81430030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_81430319_81432778_81432887_81435824_81435953_81438197_81438325_81439116
ENSMUSG00000025102.15_81431930_81439217_1	chr7	-	908	5	NNC	ENSMUSG00000025102.15	novel	887	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	112.09008653757	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTAGCAGTTTCGAGTGC	NA	False	NA	NA	False	AATAAA	-17	NA	81439217	81431929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439072
ENSMUSG00000025102.15_81431930_81439217_2	chr7	-	842	5	NNC	ENSMUSG00000025102.15	novel	887	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	122.960359465968	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTAGCAGTTTCGAGTGC	NA	False	NA	NA	False	AATAAA	-17	NA	81439217	81431929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_81432330_81432778_81432887_81435824_81435917_81438197_81438325_81439102
ENSMUSG00000025102.15_81432032_81439217_1	chr7	-	806	5	NNC	ENSMUSG00000025102.15	novel	887	5	NA	NA	0	-102	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	112.09008653757	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTAATGTCAGTTATTT	NA	False	NA	-1	True	AGTAAA	-17	NA	81439217	81432031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439072
ENSMUSG00000025102.15_81432032_81439217_2	chr7	-	776	5	FSM	ENSMUSG00000025102.15	ENSMUST00000026092.9	887	5	9	102	0	-102	multi-exon	FALSE	canonical	0	0	junction_4	120.296508677517	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTAATGTCAGTTATTT	NA	False	NA	-1	True	AGTAAA	-17	NA	81439217	81432031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439102
ENSMUSG00000025130.12_120451131_120463699_1	chr11	-	1199	8	NNC	ENSMUSG00000025130.12	novel	2861	11	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	672.99983321707	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCATTGTCACTGCTGCT	3747	False	NA	-11	True	AATAAA	-14	NA	120463699	120451130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_120451202_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ENSMUSG00000025130.12_120451771_120463699_1	chr11	-	1834	11	FSM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	380	647	-32	0	multi-exon	FALSE	canonical	3	1798	junction_7	89.3174674965653	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGGTGGTGTACTTTT	3747	False	NA	NA	False	NA	NA	NA	120463699	120451770	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ENSMUSG00000025132.14_120468930_120472450_1	chr11	-	684	3	NNC	ENSMUSG00000025132.14	novel	1867	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1584	1079	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGGTCTGTGCAGCTT	NA	False	NA	-10	True	AATAAA	-22	NA	120472450	120468929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_120469464_120471172_120471220_120472347
ENSMUSG00000025132.14_120469975_120472450_1	chr11	-	822	6	FSM	ENSMUSG00000025132.14	ENSMUST00000106197.10	1867	6	0	1045	0	-1040	multi-exon	FALSE	canonical	3	3168	junction_5	160.793780974265	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTGACAGGACCTCC	NA	False	NA	NA	False	NA	NA	NA	120472450	120469974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120472347
ENSMUSG00000025133.10_97130220_97190605_1	chr7	+	3043	22	NIC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	3	28	junction_20	102.131723224906	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTTCTGGTCC	990	False	NA	29	True	AATAAA	-17	NA	97130219	97190605	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97187106_97187228_97190218
ENSMUSG00000025133.10_97130220_97190605_2	chr7	+	3160	23	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_5	100.677539412467	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTTCTGGTCC	990	False	NA	29	True	AATAAA	-17	NA	97130219	97190605	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145023_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ENSMUSG00000025134.3_120485335_120488524_1	chr11	-	810	5	ISM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	667	2388	533	0	3prime_fragment	FALSE	canonical	3	3877	junction_4	220.512329587259	914	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCTGTCTGGTCCATC	4973	False	NA	-7	True	AATAAA	-19	NA	120488524	120485334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460
ENSMUSG00000025135.13_120489266_120496502_1	chr11	+	688	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	19	2522	0	-100	multi-exon	FALSE	canonical	3	903	junction_1	470.5	3786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGCTGGAGGCCTCTGC	3919	False	NA	29	True	AGTAAA	-18	NA	120489265	120496502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120489431_120490067_120490195_120496106
ENSMUSG00000025135.13_120489358_120496502_1	chr11	+	862	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	0	100	0	-100	multi-exon	FALSE	canonical	3	1006	junction_1	419	3606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGCTGGAGGCCTCTGC	4011	False	NA	29	True	AGTAAA	-18	NA	120489357	120496502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120489697_120490067_120490195_120496106
ENSMUSG00000025135.13_120489358_120496602_1	chr11	+	696	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	111	2422	0	0	multi-exon	FALSE	canonical	3	903	junction_1	470.5	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAAACCTTCATCGTA	4011	False	NA	129	True	AATAAA	-17	NA	120489357	120496602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120489431_120490067_120490195_120496106
ENSMUSG00000025135.13_120489496_120496502_1	chr11	+	724	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	138	100	138	-100	multi-exon	FALSE	canonical	3	1006	junction_1	419	3492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGCTGGAGGCCTCTGC	4149	False	NA	29	True	AGTAAA	-18	NA	120489495	120496502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120489697_120490067_120490195_120496106
ENSMUSG00000025137.16_120500913_120508695_1	chr11	-	1760	13	FSM	ENSMUSG00000025137.16	ENSMUST00000106188.4	1486	13	56	-330	0	0	multi-exon	FALSE	canonical	3	99	junction_7	91.5034911295131	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508695	120500912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ENSMUSG00000025137.16_120500913_120508695_2	chr11	-	2193	13	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	184	junction_6	81.3758000472704	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508695	120500912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ENSMUSG00000025139.15_141437126_141456152_1	chr7	-	1910	6	FSM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	72	1806	0	0	multi-exon	FALSE	canonical	3	274	junction_2	12.1556571192182	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCTGTACCTGACCAGT	2769	False	NA	NA	False	ATTAAA	-17	NA	141456152	141437125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141456012
ENSMUSG00000025140.16_120527594_120534542_1	chr11	-	1512	9	NIC	ENSMUSG00000025140.16	novel	2914	8	NA	NA	-12	-1056	combination_of_known_junctions	FALSE	canonical	2	46	junction_1	319.603269695415	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTAGACTACTTCCTGCT	NA	False	NA	-10	True	NA	NA	NA	120534542	120527593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_120528061_120531025_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ENSMUSG00000025140.16_120527756_120534542_1	chr11	-	1350	9	NIC	ENSMUSG00000025140.16	novel	2914	8	NA	NA	-12	-1218	combination_of_known_junctions	FALSE	canonical	2	46	junction_1	319.603269695415	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCAGTGCTGTGAGGAC	NA	False	NA	NA	False	AGTAAA	-17	NA	120534542	120527755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_120528061_120531025_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ENSMUSG00000025140.16_120530242_120534542_1	chr11	-	1700	7	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	364.341148132107	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCCCAGAGCTCCAGTC	NA	False	NA	-16	True	AATAAA	-13	NA	120534542	120530241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120534505
ENSMUSG00000025140.16_120530242_120534542_2	chr11	-	1811	8	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_7	342.313318705635	2076	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCCCAGAGCTCCAGTC	NA	False	NA	-16	True	AATAAA	-13	NA	120534542	120530241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534096_120534505
ENSMUSG00000025140.16_120530663_120534542_1	chr11	-	1408	8	FSM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	32	421	-12	-421	multi-exon	FALSE	canonical	3	750	junction_7	93.9428832116752	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCTCTCAAACAACACCGAA	NA	False	NA	NA	False	NA	NA	NA	120534542	120530662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ENSMUSG00000025142.19_120564200_120600273_1	chr11	+	2307	15	ISM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	382	0	0	0	3prime_fragment	FALSE	canonical	3	887	junction_2	62.0699079215344	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	16	True	AATAAA	-20	NA	120564199	120600273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000025142.19_120564200_120600273_2	chr11	+	1882	16	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	238.262376383683	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	16	True	AATAAA	-20	NA	120564199	120600273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_120564441_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000025142.19_120564200_120600273_3	chr11	+	1830	16	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	250.110606643452	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	16	True	AATAAA	-20	NA	120564199	120600273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_120564389_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000025142.19_120598938_120600273_1	chr11	+	653	5	NNC	ENSMUSG00000025142.19	novel	520	3	NA	NA	-546	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_2	518.755722859999	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	251	False	NA	16	True	AATAAA	-20	NA	120598937	120600273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_120599106_120599483_120599619_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000025142.19_120598938_120600273_2	chr11	+	570	5	NNC	ENSMUSG00000025142.19	novel	468	3	NA	NA	-546	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	432.921759674886	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	251	False	NA	16	True	AATAAA	-20	NA	120598937	120600273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_120599106_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000025144.18_120601769_120604564_1	chr11	-	628	5	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	330.906614470004	2774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	False	NA	-3	True	AATAAA	-18	NA	120604564	120601768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_120602133_120602215_120602328_120602528_120602583_120602669_120602722_120604518
ENSMUSG00000025144.18_120601769_120604564_2	chr11	-	553	4	NIC	ENSMUSG00000025144.18	novel	692	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	126	junction_3	359.512942125253	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	False	NA	-3	True	AATAAA	-18	NA	120604564	120601768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_120602133_120602215_120602305_120602528_120602583_120604518
ENSMUSG00000025147.8_141562287_141614801_1	chr7	-	1440	5	FSM	ENSMUSG00000025147.8	ENSMUST00000210684.2	958	5	1	-483	0	0	multi-exon	FALSE	canonical	2	4	junction_3	69.7006994226026	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCCTCTCAGCCTG	NA	False	NA	-34	True	AATAAA	-18	NA	141614801	141562286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570130_141570243_141614721
ENSMUSG00000025151.17_93579082_93585629_1	chrX	-	2699	13	FSM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	120	2	-20	0	multi-exon	FALSE	canonical	3	1240	junction_10	166.264514821681	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGTGCTTCTCATC	NA	False	NA	-4	True	AATAAA	-19	NA	93585629	93579081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ENSMUSG00000025154.16_41757959_41790486_1	chr19	-	2171	12	FSM	ENSMUSG00000025154.16	ENSMUST00000026150.15	5103	12	0	2932	0	280	multi-exon	FALSE	canonical	3	296	junction_2	42.9826026693522	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCCTTATGATGTG	4527	False	NA	NA	False	NA	NA	NA	41790486	41757958	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ENSMUSG00000025154.16_41758433_41790486_1	chr19	-	1697	12	FSM	ENSMUSG00000025154.16	ENSMUST00000026150.15	5103	12	0	3406	0	0	multi-exon	FALSE	canonical	3	296	junction_2	42.9826026693522	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTGTGCTCCGTGTTT	4527	False	NA	NA	False	NA	NA	NA	41790486	41758432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ENSMUSG00000025155.16_120680027_120687215_1	chr11	-	1828	14	NIC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	287	junction_5	178.060258399514	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687215	120680026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ENSMUSG00000025155.16_120680027_120687215_3	chr11	-	1768	14	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_10	275.977037892262	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687215	120680026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684713_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ENSMUSG00000025155.16_120680027_120687215_4	chr11	-	2108	14	NIC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	287	junction_5	197.871304777721	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687215	120680026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ENSMUSG00000025159.9_41921929_41932543_1	chr19	-	1869	12	NIC	ENSMUSG00000025159.9	novel	7875	29	NA	NA	1523	7596	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCGCAGGCGCGAGGC	754	False	NA	NA	False	NA	NA	NA	41932543	41921928	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41928295_41928344_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ENSMUSG00000025159.9_41921929_41932543_2	chr19	-	1909	11	NIC	ENSMUSG00000025159.9	novel	7875	29	NA	NA	1523	7596	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCGCAGGCGCGAGGC	754	False	NA	NA	False	NA	NA	NA	41932543	41921928	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927158_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ENSMUSG00000025161.17_120839907_120849601_1	chr11	+	2242	6	FSM	ENSMUSG00000025161.17	ENSMUST00000168579.8	4335	6	0	2093	0	0	multi-exon	FALSE	canonical	3	280	junction_1	37.4197808652055	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTCTGGCCCTCATTAG	NA	False	NA	22	True	NA	NA	NA	120839906	120849601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120839977_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
ENSMUSG00000025162.19_120852575_120881885_1	chr11	-	3404	9	FSM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	271	0	-8	0	multi-exon	FALSE	canonical	3	400	junction_1	79.8474130764423	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	1047	False	NA	-11	True	AATAAA	-22	NA	120881885	120852574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUSG00000025162.19_120854248_120881885_1	chr11	-	1731	9	FSM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	271	1673	-8	226	multi-exon	FALSE	canonical	3	400	junction_1	79.8474130764423	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTTTTATTGTTTCT	1047	False	NA	17	True	AAGAAA	-1	NA	120881885	120854247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUSG00000025162.19_120854248_120881885_2	chr11	-	1794	10	FSM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	33	1673	-8	226	multi-exon	FALSE	canonical	3	176	junction_1	174.428237039028	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTTTTATTGTTTCT	1047	False	NA	17	True	AAGAAA	-1	NA	120881885	120854247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUSG00000025184.11_42507237_42579809_1	chr19	+	3100	7	FSM	ENSMUSG00000025184.11	ENSMUST00000026188.10	4112	7	39	973	0	360	multi-exon	FALSE	canonical	3	76	junction_3	8.08290376865476	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTATGGTGTTTATAAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	42507236	42579809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_42507297_42550990_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
ENSMUSG00000025188.16_42743635_42768398_1	chr19	-	2742	20	NNC	ENSMUSG00000025188.16	novel	2847	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.5371124282743	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGCCTGTCCCTGGCCT	NA	False	NA	-3	True	AATAAA	-19	NA	42768398	42743634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748298_42748805_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ENSMUSG00000025190.14_43488191_43512977_1	chr19	-	1990	9	NNC	ENSMUSG00000025190.14	novel	2058	9	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	281.088953891824	3659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTGTGATCCATTCA	8384	False	NA	-3	True	NA	NA	NA	43512977	43488190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_43488997_43491346_43491490_43492960_43493122_43493210_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ENSMUSG00000025190.14_43488191_43512977_2	chr19	-	1986	9	NNC	ENSMUSG00000025190.14	novel	2058	9	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	277.551346600949	3783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTGTGATCCATTCA	8384	False	NA	-3	True	NA	NA	NA	43512977	43488190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_43488992_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ENSMUSG00000025190.14_43488460_43512977_1	chr19	-	1722	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	67	269	-53	0	multi-exon	FALSE	canonical	3	761	junction_5	49.6934351801121	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATTAAAACTCATCATC	8384	False	NA	NA	False	NA	NA	NA	43512977	43488459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ENSMUSG00000025190.14_43488609_43512977_1	chr19	-	1573	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	67	418	-53	145	multi-exon	FALSE	canonical	3	761	junction_5	49.6934351801121	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTAATCACCTTGCCTTC	8384	False	NA	-5	True	AATAAA	-18	NA	43512977	43488608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ENSMUSG00000025192.14_43678248_43716575_1	chr19	+	1759	12	ISM	ENSMUSG00000025192.14	ENSMUST00000081079.6	5911	13	137	5561	0	0	5prime_fragment	FALSE	canonical	2	4	junction_9	3.50206550622877	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGCCTCTCAGGTAAA	2776	False	NA	NA	False	TATAAA	-6	NA	43678247	43716575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_+_43678344_43678617_43678721_43679456_43679640_43692637_43692844_43693318_43693470_43700173_43700278_43704712_43704770_43705888_43706023_43710187_43710355_43713652_43713978_43715281_43715368_43716428
ENSMUSG00000025193.15_43723559_43741439_1	chr19	+	2932	9	NIC	ENSMUSG00000025193.15	novel	1298	9	NA	NA	-17876	-15238	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGCGCGCCCCCTCGCG	NA	False	NA	NA	False	NA	NA	NA	43723558	43741439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
ENSMUSG00000025193.15_43723681_43741439_1	chr19	+	2810	9	NIC	ENSMUSG00000025193.15	novel	1298	9	NA	NA	-17754	-15238	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGCGCGCCCCCTCGCG	NA	False	NA	NA	False	NA	NA	NA	43723680	43741439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
ENSMUSG00000025193.15_43723681_43741439_2	chr19	+	2623	8	NIC	ENSMUSG00000025193.15	novel	1298	9	NA	NA	-17754	-15238	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGCGCGCCCCCTCGCG	NA	False	NA	NA	False	NA	NA	NA	43723680	43741439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43737228_43737352_43739782_43739974_43741260
ENSMUSG00000025193.15_43724006_43741439_1	chr19	+	2485	9	NIC	ENSMUSG00000025193.15	novel	1298	9	NA	NA	-17429	-15238	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGCGCGCCCCCTCGCG	NA	False	NA	NA	False	NA	NA	NA	43724005	43741439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
ENSMUSG00000025196.5_43944746_43974637_1	chr19	-	1470	9	FSM	ENSMUSG00000025196.5	ENSMUST00000026210.5	1828	9	358	0	358	0	multi-exon	FALSE	canonical	3	15	junction_8	10.3191266587827	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCCACTTGCATGCCT	6220	False	NA	3	True	ATTAAA	-22	NA	43974637	43944745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_43945076_43948424_43948544_43952169_43952270_43954613_43954754_43956891_43957004_43958440_43958624_43962371_43962528_43969241_43969439_43974504
ENSMUSG00000025197.10_43993461_43996076_1	chr19	-	914	3	NNC	ENSMUSG00000025197.10	novel	1916	9	NA	NA	21562	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	7	65	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTGTATGTTTGACT	9513	False	NA	NA	False	AATAAA	-18	NA	43996076	43993460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_43994062_43995462_43995605_43995905
ENSMUSG00000025200.8_44097855_44124300_1	chr19	-	2787	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	15	779	0	0	multi-exon	FALSE	canonical	3	133	junction_12	11.4813973542901	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCTTTTCCACCTGGCC	NA	False	NA	-3	True	AATAAA	-20	NA	44124300	44097854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
ENSMUSG00000025200.8_44098460_44124300_1	chr19	-	2166	14	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_12	38.4159730092643	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGATGTCTTATGTTGCT	NA	False	NA	-3	True	AATAGA	-24	NA	44124300	44098459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120588_44121438_44121524_44124204
ENSMUSG00000025200.8_44098460_44124300_2	chr19	-	2182	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	15	1384	0	0	multi-exon	FALSE	canonical	3	133	junction_12	11.4813973542901	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGATGTCTTATGTTGCT	NA	False	NA	-3	True	AATAGA	-24	NA	44124300	44098459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
ENSMUSG00000025200.8_44098874_44124300_1	chr19	-	1768	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	15	1798	0	-404	multi-exon	FALSE	canonical	3	133	junction_12	11.4813973542901	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGAGCTGCCTCCCTGCC	NA	False	NA	NA	False	NA	NA	NA	44124300	44098873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
ENSMUSG00000025203.7_44282515_44291733_1	chr19	+	1483	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	402	3570	0	-684	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGACTGACGTTAACC	1469	False	NA	-37	True	NA	NA	NA	44282514	44291733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ENSMUSG00000025203.7_44282515_44291903_1	chr19	+	1653	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	402	3400	0	-514	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCGCCGCTCAGCTAT	1469	False	NA	NA	False	NA	NA	NA	44282514	44291903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ENSMUSG00000025203.7_44282515_44295303_1	chr19	+	5053	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	402	0	0	0	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	5268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1469	False	NA	22	True	AATAAA	-23	NA	44282514	44295303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ENSMUSG00000025208.10_44993378_44994859_1	chr19	-	1266	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	22	110	0	-110	multi-exon	FALSE	canonical	3	460	junction_1	27.5	6062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAGTGTTTAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	44994859	44993377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44994380_44994501_44994609_44994702
ENSMUSG00000025208.10_44993589_44994859_1	chr19	-	1055	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	22	321	0	-321	multi-exon	FALSE	canonical	3	460	junction_1	27.5	3318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGTCATTAAGACTATA	NA	False	NA	NA	False	NA	NA	NA	44994859	44993588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44994380_44994501_44994609_44994702
ENSMUSG00000025208.10_44993861_44994859_1	chr19	-	783	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	22	593	0	390	multi-exon	FALSE	canonical	3	460	junction_1	27.5	2886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGAGTCTGGAGGCTGT	NA	False	NA	-2	True	AAAACA	-3	NA	44994859	44993860	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44994380_44994501_44994609_44994702
ENSMUSG00000025212.18_45036015_45044525_1	chr19	+	2669	11	FSM	ENSMUSG00000025212.18	ENSMUST00000062213.13	2867	11	-98	296	0	0	multi-exon	TRUE	canonical	3	75	junction_2	13.7767920794356	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCAGCCCGTCTCTTTC	NA	False	NA	4	True	NA	NA	NA	45036014	45044525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_45036330_45037542_45037707_45038182_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
ENSMUSG00000025217.16_45352190_45517736_1	chr19	+	2304	16	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	157	junction_2	153.826684580046	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	21	True	TATAAA	-23	NA	45352189	45517736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUSG00000025217.16_45352190_45517736_2	chr19	+	2196	15	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	3	79	junction_2	163.999393353781	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	21	True	TATAAA	-23	NA	45352189	45517736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_45352326_45394983_45395026_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUSG00000025217.16_45352190_45517736_3	chr19	+	2286	16	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_15	188.405661627599	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	21	True	TATAAA	-23	NA	45352189	45517736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517429
ENSMUSG00000025217.16_45352272_45517736_1	chr19	+	2180	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	82	716	0	4	multi-exon	FALSE	canonical	3	261	junction_1	116.411041625118	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	21	True	TATAAA	-23	NA	45352271	45517736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUSG00000025221.17_45780785_45800730_1	chr19	-	2008	8	FSM	ENSMUSG00000025221.17	ENSMUST00000086993.11	1005	8	0	-1003	0	0	multi-exon	TRUE	canonical	3	6	junction_7	6.66394502268034	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTCTCTGCCTCTTTAT	NA	False	NA	0	True	AATAAA	-21	NA	45800730	45780784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_45782157_45782439_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018_45784144_45800636
ENSMUSG00000025227.15_46345374_46363693_1	chr19	+	1710	10	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	78.2190655928733	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGGTCTGTGCCGTG	4253	False	NA	15	True	AGTAAA	-15	NA	46345373	46363693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884_46362929_46363443
ENSMUSG00000025227.15_46345374_46363693_2	chr19	+	2416	10	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	82.6896622735489	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGGTCTGTGCCGTG	4253	False	NA	15	True	AGTAAA	-15	NA	46345373	46363693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_46345424_46350784_46350976_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ENSMUSG00000025231.18_46385443_46442482_1	chr19	+	1740	7	ISM	ENSMUSG00000025231.18	ENSMUST00000111867.9	1747	12	86	32005	0	0	5prime_fragment	FALSE	canonical	3	32	junction_6	24.709422404329	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGACTTGGTTTACTTT	NA	False	NA	NA	False	AATAAA	-23	NA	46385442	46442482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597
ENSMUSG00000025232.9_59446975_59472392_1	chr9	+	1844	14	FSM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	152	0	152	0	multi-exon	FALSE	canonical	3	1100	junction_8	84.5408762866438	3252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGGTTGCTTGTGT	NA	False	NA	32	True	AATAAA	-24	NA	59446974	59472392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ENSMUSG00000025232.9_59446975_59472392_2	chr9	+	1771	13	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	152	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_9	350.727685993311	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGGTTGCTTGTGT	NA	False	NA	32	True	AATAAA	-24	NA	59446974	59472392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ENSMUSG00000025232.9_59446975_59472392_3	chr9	+	1838	14	NNC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	152	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	342.684546229987	2203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGGTTGCTTGTGT	NA	False	NA	32	True	AATAAA	-24	NA	59446974	59472392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471171_59471271_59472103
ENSMUSG00000025236.12_59229273_59260732_1	chr9	+	2459	16	Genic_Genomic	ENSMUSG00000025236.12	novel	2490	6	NA	NA	10342	29397	multi-exon	FALSE	non_canonical	0	0	junction_1	0	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCGCGACCGGAAGCCGA	NA	False	NA	NA	False	NA	NA	NA	59229272	59260732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_59230266_59230670_59230873_59231319_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59237700_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251423_59253082_59253135_59260692
ENSMUSG00000025246.14_76554619_76704182_1	chrX	+	2827	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	0	2407	0	833	multi-exon	TRUE	canonical	3	377	junction_1	40.4669412401448	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCAGAGCATAGTAAGT	NA	False	NA	NA	False	NA	NA	NA	76554618	76704182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ENSMUSG00000025257.6_150787578_150799291_1	chrX	-	1547	8	NIC	ENSMUSG00000025257.6	novel	1508	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_7	33.0126753640761	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTGTCGTAAGAGTA	NA	False	NA	-2	True	AATAAA	-17	NA	150799291	150787577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799119
ENSMUSG00000025257.6_150787578_150799353_1	chrX	-	1485	8	NNC	ENSMUSG00000025257.6	novel	1508	8	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	36.2480119088887	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTGTCGTAAGAGTA	NA	False	NA	-2	True	AATAAA	-17	NA	150799353	150787577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799243
ENSMUSG00000025264.13_149872477_149879519_1	chrX	-	1389	5	FSM	ENSMUSG00000025264.13	ENSMUST00000112683.9	3796	5	20	2387	0	0	multi-exon	FALSE	canonical	3	302	junction_1	26.3201443765037	1463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATCCATTGTCCTCCCC	NA	False	NA	-3	True	AATAAA	-21	NA	149879519	149872476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879160_149879252_149879424
ENSMUSG00000025264.13_149872477_149879519_2	chrX	-	1398	5	FSM	ENSMUSG00000025264.13	ENSMUST00000026295.10	3804	5	20	2386	0	0	multi-exon	FALSE	canonical	3	72	junction_1	125.415310070182	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATCCATTGTCCTCCCC	NA	False	NA	-3	True	AATAAA	-21	NA	149879519	149872476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_149873411_149873591_149873778_149874671_149874764_149879160_149879252_149879424
ENSMUSG00000025265.15_149830959_149872390_1	chrX	+	3081	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	793	127	793	-127	multi-exon	FALSE	canonical	3	331	junction_3	37.9662935558211	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAGTATTTTATCGTCC	NA	False	NA	NA	False	NA	NA	NA	149830958	149872390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ENSMUSG00000025265.15_149872477_149879519_1	chrX	+	1307	4	NIC	ENSMUSG00000025265.15	novel	3240	18	NA	NA	3371	7002	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGGCTCCCAGGCAGCCC	NA	False	NA	NA	False	NA	NA	NA	149872476	149879519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_149873411_149873591_149873778_149874671_149874764_149879424
ENSMUSG00000025268.16_149589420_149595954_1	chrX	-	2150	13	NIC	ENSMUSG00000025268.16	novel	2183	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_12	45.1259810604342	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTATTGCCATTTTTG	NA	False	NA	-3	True	NA	NA	NA	149595954	149589419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149595816
ENSMUSG00000025268.16_149589420_149595954_2	chrX	-	2233	12	ISM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	749	3	0	0	3prime_fragment	FALSE	canonical	3	154	junction_9	18.0545546095372	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTATTGCCATTTTTG	NA	False	NA	-3	True	NA	NA	NA	149595954	149589419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666
ENSMUSG00000025269.17_149371252_149426874_1	chrX	-	1907	16	NNC	ENSMUSG00000025269.17	novel	3613	7	NA	NA	-54010	-4119	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTAAGAGAACTGAACTCG	NA	False	NA	NA	False	NA	NA	NA	149426874	149371251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_149371339_149371940_149372041_149372935_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ENSMUSG00000025269.17_149371252_149426874_2	chrX	-	1965	16	NNC	ENSMUSG00000025269.17	novel	3613	7	NA	NA	-54010	-4119	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTAAGAGAACTGAACTCG	NA	False	NA	NA	False	NA	NA	NA	149426874	149371251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_149371410_149371940_149372041_149372948_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ENSMUSG00000025269.17_149371252_149426874_3	chrX	-	2050	16	NIC	ENSMUSG00000025269.17	novel	3613	7	NA	NA	-54010	-4119	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTAAGAGAACTGAACTCG	NA	False	NA	NA	False	NA	NA	NA	149426874	149371251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_149371339_149371940_149372041_149372791_149373081_149391581_149391708_149394001_149394096_149395909_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ENSMUSG00000025271.14_149371252_149426874_1	chrX	+	1894	16	NIC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	50	junction_2	10.2058806577385	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	19	True	AATAAA	-37	NA	149371251	149426874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_149371339_149371940_149372041_149372948_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ENSMUSG00000025277.15_14413745_14466862_1	chr14	-	1482	9	FSM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	9	735	-8	-637	multi-exon	FALSE	canonical	3	60	junction_8	7.63216876123687	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGTTGTTGCTTCCG	NA	False	NA	-4	True	ATTAAA	-14	NA	14466862	14413744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
ENSMUSG00000025277.15_14413867_14466862_1	chr14	-	1360	9	FSM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	9	857	-8	-759	multi-exon	FALSE	canonical	3	60	junction_8	7.63216876123687	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTACCAGAAGTCTTCAAG	NA	False	NA	NA	False	NA	NA	NA	14466862	14413866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
ENSMUSG00000025278.10_14518185_14519326_1	chr14	-	1112	2	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	65706	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14519326	14518184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_14518407_14518436
ENSMUSG00000025278.10_14573226_14651816_1	chr14	-	2932	18	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	0	55041	0	9005	5prime_fragment	FALSE	canonical	3	255	junction_12	33.849964094577	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCAGGTAGGGTCCTTC	NA	False	NA	NA	False	AATACA	-7	NA	14651816	14573225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ENSMUSG00000025278.10_14596307_14651816_1	chr14	-	956	4	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	0	78122	0	-14076	5prime_fragment	FALSE	canonical	3	266	junction_3	27.0678160675491	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCCCGAGCCTATG	NA	False	NA	NA	False	NA	NA	NA	14651816	14596306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_14596429_14599895_14599994_14601987_14602237_14651329
ENSMUSG00000025283.16_153996128_153999341_1	chrX	-	1058	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	104	0	0	0	multi-exon	FALSE	canonical	3	1003	junction_1	103.839106313566	6270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGCATTTTTACTAGT	NA	False	NA	-7	True	AATAAA	-24	NA	153999341	153996127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
ENSMUSG00000025283.16_153996128_153999341_2	chrX	-	1079	6	FSM	ENSMUSG00000025283.16	ENSMUST00000112551.4	896	6	0	-183	0	0	multi-exon	FALSE	canonical	3	19	junction_2	481.393144944961	6176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGCATTTTTACTAGT	NA	False	NA	-7	True	AATAAA	-24	NA	153999341	153996127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_153996664_153996892_153996955_153997028_153997131_153998596_153998681_153998780_153998833_153999098
ENSMUSG00000025287.16_154045501_154056539_1	chrX	+	634	5	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	62	24111	0	9961	5prime_fragment	FALSE	canonical	2	666	junction_2	133.121185391357	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCATCGTCATATTGTT	NA	False	NA	NA	False	CATAAA	-14	NA	154045500	154056539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387
ENSMUSG00000025287.16_154045501_154080504_1	chrX	+	1544	15	FSM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	62	146	0	-138	multi-exon	FALSE	canonical	2	666	junction_2	111.349262068796	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTTCACTTTGCTTTG	NA	False	NA	17	True	AATAAA	-17	NA	154045500	154080504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ENSMUSG00000025287.16_154045501_154080504_2	chrX	+	1553	15	NNC	ENSMUSG00000025287.16	novel	1740	16	NA	NA	0	-138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	267.107570243961	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTTCACTTTGCTTTG	NA	False	NA	17	True	AATAAA	-17	NA	154045500	154080504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_154045671_154052654_154052759_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ENSMUSG00000025287.16_154045501_154080644_1	chrX	+	1693	15	NNC	ENSMUSG00000025287.16	novel	1740	16	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	267.107570243961	3038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGATTGTGAGTCTCCCA	NA	False	NA	20	True	AATAAA	-14	NA	154045500	154080644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_154045671_154052654_154052759_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ENSMUSG00000025290.18_24540749_24545891_1	chr14	+	519	5	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5247.91465131627	21209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTGAGAGGACAAATAAA	NA	False	NA	-18	True	NA	NA	NA	24540748	24545891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543567_24545842
ENSMUSG00000025290.18_24540786_24545927_1	chr14	+	518	5	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5247.91465131627	180375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540785	24545927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543567_24545842
ENSMUSG00000025290.18_24540786_24545927_2	chr14	+	539	5	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5247.91465131627	124000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540785	24545927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543588_24545842
ENSMUSG00000025290.18_24540786_24545927_3	chr14	+	513	5	FSM	ENSMUSG00000025290.18	ENSMUST00000225023.2	1613	5	0	1100	0	1	multi-exon	FALSE	canonical	3	4092	junction_4	3560.754932244	114986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540785	24545927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545842
ENSMUSG00000025316.17_122677314_122752676_2	chr8	+	2092	14	FSM	ENSMUSG00000025316.17	ENSMUST00000170857.8	5444	14	31	3321	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	67.0446287820338	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	TTTAAA	-45	NA	122677313	122752676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ENSMUSG00000025316.17_122677314_122752676_3	chr8	+	2083	14	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_9	50.3807984461442	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	TTTAAA	-45	NA	122677313	122752676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ENSMUSG00000025316.17_122677314_122752917_1	chr8	+	2324	14	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	94	junction_9	50.3807984461442	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	8	True	AATAAA	-16	NA	122677313	122752917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ENSMUSG00000025316.17_122677314_122752917_2	chr8	+	2207	13	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	0	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	80.1271125566538	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	8	True	AATAAA	-16	NA	122677313	122752917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122750741_122750886_122752302
ENSMUSG00000025316.17_122677314_122752917_3	chr8	+	2216	13	FSM	ENSMUSG00000025316.17	ENSMUST00000026354.15	1970	13	-5	-241	0	1	multi-exon	FALSE	non_canonical	0	0	junction_8	72.3410134171635	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	8	True	AATAAA	-16	NA	122677313	122752917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ENSMUSG00000025316.17_122677314_122752917_4	chr8	+	2090	12	NIC	ENSMUSG00000025316.17	novel	1970	13	NA	NA	0	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	86.2362697180023	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	8	True	AATAAA	-16	NA	122677313	122752917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122750741_122750886_122752302
ENSMUSG00000025316.17_122677314_122752917_5	chr8	+	2333	14	FSM	ENSMUSG00000025316.17	ENSMUST00000170857.8	5444	14	31	3080	0	1	multi-exon	FALSE	non_canonical	0	0	junction_9	67.0446287820338	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	8	True	AATAAA	-16	NA	122677313	122752917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ENSMUSG00000025317.8_122642153_122650601_1	chr8	-	1558	3	ISM	ENSMUSG00000025317.8	ENSMUST00000057653.8	1249	7	21042	-712	3612	712	intron_retention	FALSE	canonical	3	94	junction_1	2	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCTCCCCAACTGACT	NA	False	NA	NA	False	AATAAA	-18	NA	122650601	122642152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_122643247_122644726_122644883_122650293
ENSMUSG00000025317.8_122642153_122650654_1	chr8	-	1462	4	ISM	ENSMUSG00000025317.8	ENSMUST00000057653.8	1249	7	20989	-712	3559	712	3prime_fragment	FALSE	canonical	3	63	junction_3	15.6418242755334	352	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCTCCCCAACTGACT	NA	False	NA	NA	False	AATAAA	-18	NA	122650654	122642152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_122643247_122644726_122644883_122650293_122650357_122650505
ENSMUSG00000025317.8_122642865_122650642_1	chr8	-	738	4	ISM	ENSMUSG00000025317.8	ENSMUST00000057653.8	1249	7	21001	0	3571	0	3prime_fragment	FALSE	canonical	3	63	junction_3	15.6418242755334	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGAGAGACCTGCTTTG	NA	False	NA	NA	False	AAAAAG	-1	NA	122650642	122642864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_122643247_122644726_122644883_122650293_122650357_122650505
ENSMUSG00000025317.8_122642865_122650658_1	chr8	-	903	3	ISM	ENSMUSG00000025317.8	ENSMUST00000057653.8	1249	7	20985	0	3555	0	intron_retention	FALSE	canonical	3	94	junction_1	2	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGAGAGACCTGCTTTG	NA	False	NA	NA	False	AAAAAG	-1	NA	122650658	122642864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_122643247_122644726_122644883_122650293
ENSMUSG00000025329.4_140541714_140544822_1	chr4	-	1241	2	NNC	ENSMUSG00000025329.4	novel	3754	16	NA	NA	28267	-1420	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	47	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGGTCAAGGCCGGAA	NA	False	NA	NA	False	NA	NA	NA	140544822	140541713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_140542139_140544006
ENSMUSG00000025330.7_140472987_140501547_1	chr4	-	2505	16	FSM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	0	-189	0	189	multi-exon	TRUE	canonical	3	76	junction_4	15.9114214743163	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGGCTGGCAAGATGGCT	NA	False	NA	NA	False	AATAAA	-21	NA	140501547	140472986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
ENSMUSG00000025337.11_130274572_130284271_1	chr5	-	1448	5	FSM	ENSMUSG00000025337.11	ENSMUST00000026387.11	1548	5	100	0	-25	0	multi-exon	FALSE	canonical	3	697	junction_4	74.8765650921568	2405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTTGCATTTCTAGT	NA	False	NA	0	True	AATAAA	-17	NA	130284271	130274571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050
ENSMUSG00000025337.11_130274958_130284271_1	chr5	-	1062	5	FSM	ENSMUSG00000025337.11	ENSMUST00000026387.11	1548	5	100	386	-25	288	multi-exon	FALSE	canonical	3	697	junction_4	74.8765650921568	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCGTCTGCCTTTCTA	NA	False	NA	-1	True	AATACA	-21	NA	130284271	130274957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050
ENSMUSG00000025340.15_130218497_130243178_1	chr5	+	2495	8	NNC	ENSMUSG00000025340.15	novel	739	3	NA	NA	2436	0	intron_retention	FALSE	canonical	1	2	junction_1	66.8876609224263	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTGGTTTTGTTTTGT	4752	False	NA	16	True	AATAAA	-38	NA	130218496	130243178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_130218590_130219717_130219885_130226790_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
ENSMUSG00000025351.15_128745791_128748691_1	chr10	+	958	9	NNC	ENSMUSG00000025351.15	novel	1063	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	1704.70560141627	5341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	577	False	NA	35	True	ATTAAA	-27	NA	128745790	128748691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_128745828_128746263_128746341_128746533_128746645_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ENSMUSG00000025351.15_128745791_128748691_2	chr10	+	838	8	NNC	ENSMUSG00000025351.15	novel	1063	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1411.48193941904	11163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	577	False	NA	35	True	ATTAAA	-27	NA	128745790	128748691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_128745828_128746272_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ENSMUSG00000025351.15_128745791_128748691_3	chr10	+	841	8	NNC	ENSMUSG00000025351.15	novel	1063	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1408.77615145131	10596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	577	False	NA	35	True	ATTAAA	-27	NA	128745790	128748691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748385_128748543
ENSMUSG00000025351.15_128746261_128748691_1	chr10	+	807	7	NNC	ENSMUSG00000025351.15	novel	1043	8	NA	NA	-230	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1507.64228184275	2218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	1047	False	NA	35	True	ATTAAA	-27	NA	128746260	128748691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_128746341_128747320_128747510_128747663_128747739_128747842_128747933_128748029_128748171_128748306_128748391_128748543
ENSMUSG00000025353.6_128654351_128657484_1	chr10	-	1009	4	NNC	ENSMUSG00000025353.6	novel	1051	4	NA	NA	-9	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	308.174553711943	1073	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCATAATGCTGGGGA	NA	False	NA	7	True	AATAAA	-45	NA	128657484	128654350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_128654885_128655827_128655975_128656129_128656384_128657410
ENSMUSG00000025353.6_128654351_128657484_2	chr10	-	1007	4	NNC	ENSMUSG00000025353.6	novel	1051	4	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	389.236289275408	1753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCATAATGCTGGGGA	NA	False	NA	7	True	AATAAA	-45	NA	128657484	128654350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_128654885_128655822_128655975_128656129_128656377_128657410
ENSMUSG00000025353.6_128654351_128657484_4	chr10	-	935	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219524.2	724	4	30	-241	-9	0	multi-exon	FALSE	canonical	3	322	junction_3	240.049994792751	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCATAATGCTGGGGA	NA	False	NA	7	True	AATAAA	-45	NA	128657484	128654350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128654885_128655822_128655975_128656129_128656305_128657410
ENSMUSG00000025354.6_128641452_128653383_1	chr10	+	2359	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	29	1745	0	11	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAAATTGTTCACTCA	4045	False	NA	18	True	AAAAAG	-6	NA	128641451	128653383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUSG00000025354.6_128641452_128654022_1	chr10	+	2998	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	29	1106	0	650	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTCCTTCTCTTCTTTA	4045	False	NA	NA	False	TATAAA	-19	NA	128641451	128654022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUSG00000025354.6_128653771_128657484_1	chr10	+	1594	4	NIC	ENSMUSG00000025354.6	novel	4133	7	NA	NA	10524	2169	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	3191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCGCCCTGTCTGCGC	NA	False	NA	NA	False	NA	NA	NA	128653770	128657484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_128654885_128655822_128655975_128656129_128656384_128657410
ENSMUSG00000025354.6_128654351_128657484_1	chr10	+	1014	4	NIC	ENSMUSG00000025354.6	novel	4133	7	NA	NA	11104	2169	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCGCCCTGTCTGCGC	NA	False	NA	NA	False	NA	NA	NA	128654350	128657484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_128654885_128655822_128655975_128656129_128656384_128657410
ENSMUSG00000025354.6_128654592_128657484_1	chr10	+	773	4	NIC	ENSMUSG00000025354.6	novel	4133	7	NA	NA	11345	2169	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCGCCCTGTCTGCGC	NA	False	NA	NA	False	NA	NA	NA	128654591	128657484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_128654885_128655822_128655975_128656129_128656384_128657410
ENSMUSG00000025357.9_128556005_128557385_1	chr10	-	892	4	ISM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	22559	2	9531	0	3prime_fragment	FALSE	canonical	3	88	junction_2	12.5521135891752	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTCCCGCAAGGTTCT	8848	False	NA	-12	True	AATAAA	-14	NA	128557385	128556004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046
ENSMUSG00000025358.17_128533813_128540899_1	chr10	-	2399	8	NNC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	407.370312404539	1817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAGAGTGAATCTCTTT	8248	False	NA	-21	True	ATTAAA	-15	NA	128540899	128533812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_128535080_128535340_128535534_128535840_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ENSMUSG00000025358.17_128534958_128540899_1	chr10	-	1117	7	FSM	ENSMUSG00000025358.17	ENSMUST00000026415.9	2240	7	-27	1150	0	1049	multi-exon	FALSE	canonical	3	439	junction_2	273.112309011024	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACCCGTGGTCTGACT	8248	False	NA	NA	False	ACTAAA	-42	NA	128540899	128534957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ENSMUSG00000025358.17_128534958_128540899_2	chr10	-	1261	8	FSM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	0	1145	0	1049	multi-exon	FALSE	canonical	3	682	junction_2	218.467295455575	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACCCGTGGTCTGACT	8248	False	NA	NA	False	ACTAAA	-42	NA	128540899	128534957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ENSMUSG00000025359.11_128541049_128555993_1	chr10	+	2143	12	NIC	ENSMUSG00000025359.11	novel	2130	11	NA	NA	0	-114	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	18.002295537739	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGAGGGCTTTTGTTGCTG	NA	False	NA	4	True	AATAAA	-15	NA	128541048	128555993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_128541154_128542104_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
ENSMUSG00000025359.11_128556005_128579944_1	chr10	+	2832	24	NIC	ENSMUSG00000025359.11	novel	2130	11	NA	NA	13878	23837	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGGGCCGCCCAGCTC	NA	False	NA	NA	False	NA	NA	NA	128556004	128579944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664
ENSMUSG00000025362.7_128460406_128462393_1	chr10	-	458	4	FSM	ENSMUSG00000025362.7	ENSMUST00000026420.7	681	4	223	0	0	0	multi-exon	FALSE	canonical	3	11844	junction_3	3964.03030036631	231237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCATCGGAGTGTGTT	NA	False	NA	-12	True	NA	NA	NA	128462393	128460405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128460506_128461075_128461207_128461931_128462110_128462344
ENSMUSG00000025362.7_128460406_128462393_2	chr10	-	447	4	NNC	ENSMUSG00000025362.7	novel	681	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8985.52882262487	203074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCATCGGAGTGTGTT	NA	False	NA	-12	True	NA	NA	NA	128462393	128460405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_128460506_128461075_128461207_128461931_128462099_128462344
ENSMUSG00000025364.14_128394508_128401811_1	chr10	-	1567	12	FSM	ENSMUSG00000025364.14	ENSMUST00000026425.13	2432	12	-8	873	-8	-871	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	15289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCGTCGTCAAGCCCCT	8737	False	NA	-13	True	AATAAA	-15	NA	128401811	128394507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ENSMUSG00000025364.14_128394508_128401811_2	chr10	-	1562	12	NNC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-8	-871	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	600.350930431045	4644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCGTCGTCAAGCCCCT	8737	False	NA	-13	True	AATAAA	-15	NA	128401811	128394507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398780_128398930_128399005_128399092_128399199_128399445_128399575_128401608
ENSMUSG00000025364.14_128394508_128401880_1	chr10	-	1636	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	-24	871	-24	-871	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	15646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCGTCGTCAAGCCCCT	8668	False	NA	-13	True	AATAAA	-15	NA	128401880	128394507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ENSMUSG00000025364.14_128394637_128401880_1	chr10	-	1507	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	-24	1000	-24	-1000	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	2357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCCACCCACTCCTTTC	8668	False	NA	NA	False	NA	NA	NA	128401880	128394636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ENSMUSG00000025372.17_119833942_119897608_1	chr11	+	2089	15	FSM	ENSMUSG00000025372.17	ENSMUST00000106233.2	2442	15	353	0	0	0	multi-exon	TRUE	canonical	2	2	junction_13	13.1158495799579	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTGTGTGGTCTGTTGT	NA	False	NA	10	True	AATAAA	-16	NA	119833941	119897608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119893863_119893912_119897184
ENSMUSG00000025373.15_128247526_128275295_1	chr10	+	2321	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	-89	912	0	0	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTATGCCCTTTCTTTGGC	226	False	NA	NA	False	AAGAAA	-38	NA	128247525	128275295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ENSMUSG00000025373.15_128247526_128275295_2	chr10	+	2305	7	NNC	ENSMUSG00000025373.15	novel	3283	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_4	45.9190108294545	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTATGCCCTTTCTTTGGC	226	False	NA	NA	False	AAGAAA	-38	NA	128247525	128275295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271438_128272336_128272473_128273176_128273281_128273951
ENSMUSG00000025373.15_128247615_128274625_1	chr10	+	1562	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	0	1582	0	-661	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCAGGGTAGAGTGAGGC	315	False	NA	NA	False	AAGAAA	-16	NA	128247614	128274625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ENSMUSG00000025373.15_128247615_128275295_1	chr10	+	2216	7	NNC	ENSMUSG00000025373.15	novel	3144	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_4	45.9190108294545	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTATGCCCTTTCTTTGGC	315	False	NA	NA	False	AAGAAA	-38	NA	128247614	128275295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271438_128272336_128272473_128273176_128273281_128273951
ENSMUSG00000025373.15_128247615_128275295_2	chr10	+	2232	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	0	912	0	0	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTATGCCCTTTCTTTGGC	315	False	NA	NA	False	AAGAAA	-38	NA	128247614	128275295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ENSMUSG00000025374.14_128237264_128245656_1	chr10	-	1272	7	FSM	ENSMUSG00000025374.14	ENSMUST00000172348.8	612	7	-155	-505	-51	0	multi-exon	FALSE	canonical	3	7	junction_6	118.544881327238	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	False	NA	-7	True	AATAAA	-13	NA	128245656	128237263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115_128245218_128245375
ENSMUSG00000025374.14_128237459_128245656_1	chr10	-	848	7	FSM	ENSMUSG00000025374.14	ENSMUST00000026439.14	1130	7	87	195	-51	0	multi-exon	FALSE	canonical	3	274	junction_1	32.5444140965679	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGGAGGGGTTGGAAGCA	NA	False	NA	NA	False	GATAAA	-27	NA	128245656	128237458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115_128245218_128245604
ENSMUSG00000025381.4_128158328_128163056_1	chr10	+	1017	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	0	366	0	0	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	5808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACTGTGTTGTCTTTTTT	NA	False	NA	33	True	AATGAA	-29	NA	128158327	128163056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ENSMUSG00000025381.4_128158414_128163056_1	chr10	+	931	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	86	366	0	0	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	5684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACTGTGTTGTCTTTTTT	NA	False	NA	33	True	AATGAA	-29	NA	128158413	128163056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ENSMUSG00000025381.4_128158414_128163056_2	chr10	+	874	6	NIC	ENSMUSG00000025381.4	novel	1383	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	1028.12695714099	2773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACTGTGTTGTCTTTTTT	NA	False	NA	33	True	AATGAA	-29	NA	128158413	128163056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_128158588_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ENSMUSG00000025381.4_128158590_128163056_1	chr10	+	755	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	262	366	-126	0	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	1966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACTGTGTTGTCTTTTTT	NA	False	NA	33	True	AATGAA	-29	NA	128158589	128163056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ENSMUSG00000025389.8_128064985_128068166_1	chr10	+	630	3	Fusion	ENSMUSG00000025389.8_ENSMUSG00000039994.16	novel	807	7	NA	NA	-2949	485	multi-exon	FALSE	non_canonical	0	0	junction_1	0	98	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTCCCGGCGCGCACGC	3642	False	NA	NA	False	NA	NA	NA	128064984	128068166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr10_+_128065342_128066773_128066877_128067996
ENSMUSG00000025393.13_127919175_127926029_1	chr10	+	1647	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3385.75991069058	4893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGCGAGAGCTCAGGTT	NA	False	NA	-91	True	NA	NA	NA	127919174	127926029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127919323_127919760_127919944_127920170_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ENSMUSG00000025393.13_127919175_127926029_2	chr10	+	1652	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	33	231	0	0	multi-exon	FALSE	canonical	3	8904	junction_3	854.417771581948	34392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGCGAGAGCTCAGGTT	NA	False	NA	-91	True	NA	NA	NA	127919174	127926029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ENSMUSG00000025393.13_127919175_127926142_1	chr10	+	1770	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	3318.14612824617	43920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCTGTTTATGTTGC	NA	False	NA	22	True	AATAAA	-15	NA	127919174	127926142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925033_127925887
ENSMUSG00000025393.13_127919175_127926142_2	chr10	+	1760	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3385.75991069058	43740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCTGTTTATGTTGC	NA	False	NA	22	True	AATAAA	-15	NA	127919174	127926142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127919323_127919760_127919944_127920170_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ENSMUSG00000025395.15_127851065_127865736_1	chr10	+	1385	13	NNC	ENSMUSG00000025395.15	novel	1536	13	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	189.963593003151	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTCAATCCTTGAAGC	1008	False	NA	25	True	AATAAA	-18	NA	127851064	127865736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858832_127859445_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ENSMUSG00000025395.15_127851065_127865861_2	chr10	+	1508	13	NNC	ENSMUSG00000025395.15	novel	1583	13	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	196.843776183608	2762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTTGTAAAATGTATTA	1008	False	NA	11	True	AATAAA	-21	NA	127851064	127865861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856130_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ENSMUSG00000025395.15_127851065_127865861_3	chr10	+	1356	12	NIC	ENSMUSG00000025395.15	novel	1583	13	NA	NA	0	9	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	204.658958406903	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTTGTAAAATGTATTA	1008	False	NA	11	True	AATAAA	-21	NA	127851064	127865861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_127851221_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ENSMUSG00000025400.12_127563716_127567637_1	chr10	+	665	6	NNC	ENSMUSG00000025400.12	novel	514	3	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	36	junction_5	3.96988664825584	182	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGATGCAATAGGCTG	NA	False	NA	7	True	AATAAA	-17	NA	127563715	127567637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127563897_127564039_127564146_127564315_127564346_127564982_127565037_127565344_127565419_127567417
ENSMUSG00000025402.13_127493883_127496847_1	chr10	-	1803	6	NIC	ENSMUSG00000025402.13	novel	2311	6	NA	NA	4503	2904	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1041	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGAGGGAGGAAGGTTG	NA	False	NA	NA	False	NA	NA	NA	127496847	127493882	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ENSMUSG00000025402.13_127493975_127496830_1	chr10	-	1694	6	NIC	ENSMUSG00000025402.13	novel	2311	6	NA	NA	4520	2812	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1025	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGATGGGCAGGTGGAG	NA	False	NA	NA	False	NA	NA	NA	127496830	127493974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ENSMUSG00000025403.6_127352992_127358255_1	chr10	-	2213	13	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	664.696672676091	1908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358255	127352991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_127353626_127353650_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ENSMUSG00000025403.6_127352992_127358255_2	chr10	-	2222	13	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	578.432940509673	3114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358255	127352991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_127353626_127353650_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ENSMUSG00000025403.6_127353186_127358255_1	chr10	-	2028	13	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	0	-178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	578.432940509673	2583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358255	127353185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_127353626_127353650_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ENSMUSG00000025403.6_127353186_127358255_2	chr10	-	2024	13	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	0	-178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	578.432940509673	2549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358255	127353185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_127353623_127353651_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ENSMUSG00000025403.6_127353186_127358255_3	chr10	-	2019	13	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	0	-178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	664.696672676091	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358255	127353185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_127353626_127353650_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ENSMUSG00000025403.6_127353186_127358255_4	chr10	-	2053	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	58	178	0	-178	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	3135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358255	127353185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ENSMUSG00000025403.6_127353186_127358255_5	chr10	-	2044	12	FSM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	0	194	0	-178	multi-exon	FALSE	canonical	3	625	junction_11	417.657853565126	2712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358255	127353185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ENSMUSG00000025403.6_127353490_127358255_1	chr10	-	1715	13	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	0	112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	664.696672676091	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGCTGAGATTTCTGA	NA	False	NA	-10	True	CATAAA	-14	NA	127358255	127353489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_127353626_127353650_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ENSMUSG00000025403.6_127353490_127358255_2	chr10	-	1740	12	FSM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	0	498	0	112	multi-exon	FALSE	canonical	3	625	junction_11	417.657853565126	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGCTGAGATTTCTGA	NA	False	NA	-10	True	CATAAA	-14	NA	127358255	127353489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ENSMUSG00000025403.6_127353490_127358255_3	chr10	-	1724	13	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	0	112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	578.432940509673	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGCTGAGATTTCTGA	NA	False	NA	-10	True	CATAAA	-14	NA	127358255	127353489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_127353626_127353650_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ENSMUSG00000025403.6_127353490_127358255_4	chr10	-	1749	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	58	482	0	112	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGCTGAGATTTCTGA	NA	False	NA	-10	True	CATAAA	-14	NA	127358255	127353489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ENSMUSG00000025408.16_127126662_127132157_1	chr10	+	785	5	NNC	ENSMUSG00000025408.16	novel	890	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	340.624701834732	799	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCACTTTTTCTTCTT	NA	False	NA	29	True	AGTAAA	-18	NA	127126661	127132157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127126761_127129580_127129629_127131189_127131348_127131591_127131889_127131974
ENSMUSG00000025408.16_127132095_127147547_1	chr10	+	2819	21	NNC	ENSMUSG00000025408.16	novel	890	4	NA	NA	5432	15390	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTAAGCTGCAAGGCACG	2448	False	NA	NA	False	NA	NA	NA	127132094	127147547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127132310_127132409_127132496_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ENSMUSG00000025410.11_127102256_127117676_1	chr10	+	1822	13	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	0	-143	intron_retention	FALSE	canonical	3	604	junction_8	37.2904329404861	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGCTGTGTTCCTGGA	9216	False	NA	23	True	ATTAAA	-18	NA	127102255	127117676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127114092_127114185_127114278_127117269
ENSMUSG00000025410.11_127102256_127117676_4	chr10	+	1651	14	NNC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	0	-143	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	182.150597684132	2687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGCTGTGTTCCTGGA	9216	False	NA	23	True	ATTAAA	-18	NA	127102255	127117676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127102404_127103282_127103362_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ENSMUSG00000025410.11_127102256_127117676_7	chr10	+	197	2	NNC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	0	-143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGCTGTGTTCCTGGA	9216	False	NA	23	True	ATTAAA	-18	NA	127102255	127117676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127102392_127117615
ENSMUSG00000025410.11_127102256_127117823_2	chr10	+	1798	14	NNC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	182.150597684132	3142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGTTTCAAAATATTCT	9216	False	NA	20	True	AATAAA	-22	NA	127102255	127117823	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127102404_127103282_127103362_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ENSMUSG00000025410.11_127102256_127117823_3	chr10	+	344	2	NNC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGTTTCAAAATATTCT	9216	False	NA	20	True	AATAAA	-22	NA	127102255	127117823	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127102392_127117615
ENSMUSG00000025410.11_127102256_127117823_5	chr10	+	1969	13	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	0	4	intron_retention	FALSE	canonical	3	604	junction_8	37.2904329404861	2370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGTTTCAAAATATTCT	9216	False	NA	20	True	AATAAA	-22	NA	127102255	127117823	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127114092_127114185_127114278_127117269
ENSMUSG00000025421.16_77031823_77058597_2	chr18	+	1036	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	35	4406	0	-504	multi-exon	FALSE	canonical	0	0	junction_2	128.264050562372	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGAGCTGAGATTTTGTG	NA	False	NA	NA	False	TATAAA	-22	NA	77031822	77058597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUSG00000025421.16_77031823_77059101_1	chr18	+	1547	7	NNC	ENSMUSG00000025421.16	novel	1538	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	128.264050562372	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAATTAGACATTGTT	NA	False	NA	19	True	NA	NA	NA	77031822	77059101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_77031882_77038808_77038927_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUSG00000025421.16_77031823_77059101_2	chr18	+	1540	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	35	3902	0	0	multi-exon	FALSE	canonical	0	0	junction_2	128.264050562372	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAATTAGACATTGTT	NA	False	NA	19	True	NA	NA	NA	77031822	77059101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUSG00000025421.16_77032080_77059101_1	chr18	+	1629	7	FSM	ENSMUSG00000025421.16	ENSMUST00000150990.9	3126	7	0	1497	0	0	multi-exon	FALSE	canonical	0	0	junction_2	156.505235979148	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAATTAGACATTGTT	NA	False	NA	19	True	NA	NA	NA	77032079	77059101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_77032228_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUSG00000025423.17_77126251_77234497_1	chr18	+	2117	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	-136	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	397.186734137922	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATTGGAAAAGAGCTTGA	6432	False	NA	7	True	AATAAA	-17	NA	77126250	77234497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_77126368_77126400_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ENSMUSG00000025423.17_77126251_77234497_2	chr18	+	2123	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	-136	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	397.186734137922	825	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATTGGAAAAGAGCTTGA	6432	False	NA	7	True	AATAAA	-17	NA	77126250	77234497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_77126367_77126393_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ENSMUSG00000025423.17_77126251_77234635_1	chr18	+	2261	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	397.186734137922	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTAGCATTTATGCTTT	6432	False	NA	21	True	ATTAAA	-33	NA	77126250	77234635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_77126367_77126393_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ENSMUSG00000025423.17_77126251_77240815_1	chr18	+	2565	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	362.40677900584	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTCTAATTAAAGATGTA	6432	False	NA	15	True	AATAAA	-28	NA	77126250	77240815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_77126367_77126395_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ENSMUSG00000025423.17_77126251_77240815_2	chr18	+	2561	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	362.40677900584	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTCTAATTAAAGATGTA	6432	False	NA	15	True	AATAAA	-28	NA	77126250	77240815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_77126368_77126400_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ENSMUSG00000025423.17_77126251_77240815_3	chr18	+	2594	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	2	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTCTAATTAAAGATGTA	6432	False	NA	15	True	AATAAA	-28	NA	77126250	77240815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ENSMUSG00000025423.17_77126251_77241198_1	chr18	+	2948	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	166	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	362.40677900584	1222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTGTAGAATTTTCTG	6432	False	NA	44	True	TATAAA	-27	NA	77126250	77241198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_77126367_77126395_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ENSMUSG00000025423.17_77126251_77241198_2	chr18	+	2944	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	166	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	362.40677900584	1262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTGTAGAATTTTCTG	6432	False	NA	44	True	TATAAA	-27	NA	77126250	77241198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_77126368_77126400_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ENSMUSG00000025423.17_77126251_77241198_3	chr18	+	2977	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	166	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	1368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTGTAGAATTTTCTG	6432	False	NA	44	True	TATAAA	-27	NA	77126250	77241198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ENSMUSG00000025423.17_77126272_77238275_1	chr18	+	2549	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26632	-2538	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	196.592570787629	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGACTGCGTGGTGAGCA	6453	False	NA	NA	False	AAGAAA	-33	NA	77126271	77238275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756
ENSMUSG00000025423.17_77152941_77234533_1	chr18	+	1934	13	NIC	ENSMUSG00000025423.17	novel	2633	15	NA	NA	0	-100	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	338.465163150754	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGCCTTATTATTGT	7936	False	NA	43	True	AAGAAA	-4	NA	77152940	77234533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ENSMUSG00000025428.16_77861692_77870212_1	chr18	+	1845	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	0	-143	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1586.70890746375	16812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTAGTTTGTGTGGGGGTG	NA	False	NA	27	True	AATAAA	-15	NA	77861691	77870212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_77861811_77863476_77863556_77865224_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ENSMUSG00000025428.16_77861692_77870569_1	chr18	+	2202	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1586.70890746375	27772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGTTGATGAGTC	NA	False	NA	20	True	ATTAAA	-22	NA	77861691	77870569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_77861811_77863476_77863556_77865224_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ENSMUSG00000025428.16_77861692_77870569_2	chr18	+	2208	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	263	0	0	0	multi-exon	FALSE	canonical	3	5078	junction_4	224.265707226978	27953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGTTGATGAGTC	NA	False	NA	20	True	ATTAAA	-22	NA	77861691	77870569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ENSMUSG00000025439.6_97345902_97368086_1	chr7	+	1437	7	NNC	ENSMUSG00000025439.6	novel	1504	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	460.094796995383	4143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGCTGTGATTTTGCTCT	NA	False	NA	11	True	AATAAA	-17	NA	97345901	97368086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363119_97363288_97365657_97365747_97367425
ENSMUSG00000025465.14_139686148_139696335_1	chr7	-	978	8	FSM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	54	525	0	-517	multi-exon	FALSE	canonical	3	1613	junction_2	95.2071854602651	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAGTGTCGGCCACAGTT	NA	False	NA	-2	True	AATAAA	-14	NA	139696335	139686147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ENSMUSG00000025466.20_139679383_139681889_1	chr7	-	732	6	NIC	ENSMUSG00000025466.20	novel	685	6	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	140	junction_5	128.971934931597	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTGGTGAGTTCC	1936	False	NA	0	True	NA	NA	NA	139681889	139679382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681707
ENSMUSG00000025466.20_139679383_139682245_1	chr7	-	873	6	NNC	ENSMUSG00000025466.20	novel	685	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	171.429752376885	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTGGTGAGTTCC	1580	False	NA	0	True	NA	NA	NA	139682245	139679382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681922
ENSMUSG00000025468.16_139649800_139650728_1	chr7	-	651	2	ISM	ENSMUSG00000025468.16	ENSMUST00000211044.2	1029	6	11412	6	11412	0	3prime_fragment	FALSE	canonical	3	34	junction_1	0	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGGGTCGTGGTTTCTC	9451	False	NA	-7	True	AGTAAA	-11	NA	139650728	139649799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_139649947_139650224
ENSMUSG00000025468.16_139649800_139650914_1	chr7	-	837	2	ISM	ENSMUSG00000025468.16	ENSMUST00000211044.2	1029	6	11226	6	11226	0	3prime_fragment	FALSE	canonical	3	34	junction_1	0	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGGGTCGTGGTTTCTC	9265	False	NA	-7	True	AGTAAA	-11	NA	139650914	139649799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_139649947_139650224
ENSMUSG00000025470.12_139575909_139616582_1	chr7	+	3112	18	NIC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	-40395	-273	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCTGTGGGCGGGGCTTG	NA	False	NA	NA	False	NA	NA	NA	139575908	139616582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ENSMUSG00000025470.12_139616325_139620514_1	chr7	+	1016	6	NNC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_4	120.382058463876	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTGTTCTTCTTCAT	NA	False	NA	18	True	AATAAA	-15	NA	139616324	139620514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617495_139619238_139619359_139620155
ENSMUSG00000025470.12_139616325_139620514_2	chr7	+	1001	5	NIC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	147.438758472798	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTGTTCTTCTTCAT	NA	False	NA	18	True	AATAAA	-15	NA	139616324	139620514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_139616520_139617132_139617335_139617428_139617554_139619238_139619359_139620155
ENSMUSG00000025470.12_139616441_139620514_1	chr7	+	900	6	NNC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_4	120.382058463876	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTGTTCTTCTTCAT	NA	False	NA	18	True	AATAAA	-15	NA	139616440	139620514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617495_139619238_139619359_139620155
ENSMUSG00000025470.12_139616441_139620514_2	chr7	+	959	6	FSM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	116	1	0	-1	multi-exon	FALSE	canonical	3	304	junction_1	28.032837887021	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTGTTCTTCTTCAT	NA	False	NA	18	True	AATAAA	-15	NA	139616440	139620514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
ENSMUSG00000025474.10_139575909_139616303_1	chr7	-	3084	18	FSM	ENSMUSG00000025474.10	ENSMUST00000026547.9	2960	18	-124	0	0	0	multi-exon	FALSE	canonical	3	147	junction_17	73.93539684464	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGCATTATTACTG	NA	False	NA	NA	False	NA	NA	NA	139616303	139575908	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
ENSMUSG00000025474.10_139616325_139620514_1	chr7	-	1069	6	NNC	ENSMUSG00000025474.10	novel	3060	18	NA	NA	-3932	-5392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACGGACGTGACGTCTAC	NA	False	NA	NA	False	NA	NA	NA	139620514	139616324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_139616520_139616732_139616807_139617132_139617335_139617434_139617554_139619238_139619359_139620155
ENSMUSG00000025481.13_140415054_140417879_1	chr7	+	778	4	NIC	ENSMUSG00000025481.13	novel	719	4	NA	NA	123	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	111.547697819762	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAATCTGAACCTATCATT	NA	False	NA	27	True	AATAAA	-17	NA	140415053	140417879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_140415172_140415524_140415665_140416659_140416796_140417495
ENSMUSG00000025484.10_140433307_140436230_1	chr7	-	1476	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	792	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	2.62466929133727	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTCTATGTCTGTGT	NA	False	NA	-10	True	CATAAA	-31	NA	140436230	140433306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
ENSMUSG00000025484.10_140434283_140436230_1	chr7	-	500	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	792	976	0	0	multi-exon	FALSE	canonical	3	105	junction_2	2.62466929133727	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTTTGAAATTATCATCA	NA	False	NA	NA	False	NA	NA	NA	140436230	140434282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
ENSMUSG00000025484.10_140437335_140443056_1	chr7	-	2354	10	NIC	ENSMUSG00000025484.10	novel	489	4	NA	NA	-5566	-1150	intron_retention	FALSE	non_canonical	0	0	junction_1	0	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAACCCCGGGGCTCCGC	NA	False	NA	NA	False	NA	NA	NA	140443056	140437334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ENSMUSG00000025485.14_140443583_140461740_1	chr7	+	1212	6	NIC	ENSMUSG00000025485.14	novel	1942	8	NA	NA	2497	17455	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGACGGCGCCTAGAGG	NA	False	NA	NA	False	NA	NA	NA	140443582	140461740	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_140443997_140444887_140445098_140456266_140456368_140457562_140457796_140457869_140458059_140461675
ENSMUSG00000025485.14_140443583_140462202_1	chr7	+	1441	7	Fusion	ENSMUSG00000025485.14_ENSMUSG00000025487.16	novel	1942	8	NA	NA	2497	-4889	multi-exon	FALSE	non_canonical	0	0	junction_1	0	819	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAAGTTTAGCGGAAGT	NA	False	NA	NA	False	NA	NA	NA	140443582	140462202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr7_+_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458059_140462070
ENSMUSG00000025486.18_140443583_140461740_1	chr7	-	1366	7	NIC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	62.3475919520732	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCATCCTGTCTCTTTG	NA	False	NA	-14	True	AATAAA	-14	NA	140461740	140443582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458051_140461675
ENSMUSG00000025486.18_140443583_140461740_2	chr7	-	1204	6	NIC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	96.6788498069769	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCATCCTGTCTCTTTG	NA	False	NA	-14	True	AATAAA	-14	NA	140461740	140443582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_140443997_140444887_140445098_140456266_140456368_140457562_140457796_140457869_140458051_140461675
ENSMUSG00000025486.18_140443583_140461740_3	chr7	-	1280	7	NIC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	76.8188706561668	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCATCCTGTCTCTTTG	NA	False	NA	-14	True	AATAAA	-14	NA	140461740	140443582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140457965_140461675
ENSMUSG00000025487.16_140462327_140478555_1	chr7	+	1537	12	NNC	ENSMUSG00000025487.16	novel	1989	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	351.508437762427	4355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	28	True	AATAAA	-16	NA	140462326	140478555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_140462480_140463412_140463521_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
ENSMUSG00000025487.16_140462327_140478555_2	chr7	+	1543	13	FSM	ENSMUSG00000025487.16	ENSMUST00000026560.14	1989	13	446	0	0	0	multi-exon	FALSE	canonical	3	1065	junction_10	109.792987025584	4387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	28	True	AATAAA	-16	NA	140462326	140478555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
ENSMUSG00000025491.15_140548144_140549738_1	chr7	+	545	2	FSM	ENSMUSG00000025491.15	ENSMUST00000026564.9	736	2	191	0	191	0	multi-exon	FALSE	canonical	3	1139	junction_1	0	4825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTCCTGTGTTGAGT	NA	False	NA	24	True	AATAAA	-28	NA	140548143	140549738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140548352_140549401
ENSMUSG00000025494.9_140671088_140676652_2	chr7	-	1670	10	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	90	junction_9	19.9616917069288	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676652	140671087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
ENSMUSG00000025494.9_140671088_140676652_3	chr7	-	1971	9	NIC	ENSMUSG00000025494.9	novel	1897	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	90	junction_8	21.1527185014125	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676652	140671087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
ENSMUSG00000025494.9_140671088_140676754_1	chr7	-	1832	10	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-102	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	41.7703894176098	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676754	140671087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676472
ENSMUSG00000025494.9_140671088_140676754_2	chr7	-	1772	10	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-102	0	combination_of_known_splicesites	FALSE	canonical	3	90	junction_9	19.9616917069288	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676754	140671087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
ENSMUSG00000025494.9_140671088_140676754_3	chr7	-	2073	9	NIC	ENSMUSG00000025494.9	novel	1897	9	NA	NA	-102	0	intron_retention	FALSE	canonical	3	90	junction_8	21.1527185014125	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676754	140671087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
ENSMUSG00000025495.16_140711214_140736067_2	chr7	+	2157	12	FSM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	15	1452	0	552	multi-exon	FALSE	canonical	3	293	junction_1	17.146910185967	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCCTCTGGCTGCCCTT	6825	False	NA	11	True	AATAAA	-16	NA	140711213	140736067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ENSMUSG00000025495.16_140711214_140736067_3	chr7	+	2006	10	NIC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	0	552	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	99.4836049523789	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCCTCTGGCTGCCCTT	6825	False	NA	11	True	AATAAA	-16	NA	140711213	140736067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_140711431_140715221_140715324_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ENSMUSG00000025495.16_140714506_140736067_1	chr7	+	2079	12	NNC	ENSMUSG00000025495.16	novel	408	3	NA	NA	2040	552	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	84.6823915463925	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCCTCTGGCTGCCCTT	NA	False	NA	11	True	AATAAA	-16	NA	140714505	140736067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_140714645_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ENSMUSG00000025495.16_140728714_140736067_1	chr7	+	1813	9	NNC	ENSMUSG00000025495.16	novel	408	3	NA	NA	-5822	552	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	106.400187969759	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCCTCTGGCTGCCCTT	NA	False	NA	11	True	AATAAA	-16	NA	140728713	140736067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_140728840_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ENSMUSG00000025498.16_140840019_140842659_1	chr7	-	1554	5	NIC	ENSMUSG00000025498.16	novel	2237	10	NA	NA	2385	2600	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGCAAGACACTTACTTC	NA	False	NA	NA	False	NA	NA	NA	140842659	140840018	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ENSMUSG00000025499.19_140770843_140773798_1	chr7	-	1075	5	FSM	ENSMUSG00000025499.19	ENSMUST00000097957.11	1199	5	120	4	-3	0	multi-exon	FALSE	canonical	3	437	junction_1	76.3392919799496	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTCTCTGGCTGGA	NA	False	NA	-6	True	AGTAAA	-14	NA	140773798	140770842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
ENSMUSG00000025504.15_140918919_140942933_1	chr7	+	3065	21	FSM	ENSMUSG00000025504.15	ENSMUST00000026577.13	3191	21	126	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	10.2434125173206	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGATATCTGTTTCTTGG	NA	False	NA	7	True	AATAAA	-19	NA	140918918	140942933	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ENSMUSG00000025508.14_141027544_141031262_1	chr7	+	467	5	FSM	ENSMUSG00000025508.14	ENSMUST00000084434.11	964	5	261	236	0	0	multi-exon	FALSE	canonical	3	11307	junction_1	1806.73116428538	267558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCTTTAAACATTTTG	2378	False	NA	26	True	AATAAA	-19	NA	141027543	141031262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031144
ENSMUSG00000025508.14_141027582_141031262_1	chr7	+	429	5	FSM	ENSMUSG00000025508.14	ENSMUST00000084434.11	964	5	299	236	0	0	multi-exon	FALSE	canonical	3	11307	junction_1	1806.73116428538	199657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCTTTAAACATTTTG	2416	False	NA	26	True	AATAAA	-19	NA	141027581	141031262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031144
ENSMUSG00000025508.14_141027582_141031262_2	chr7	+	410	5	NNC	ENSMUSG00000025508.14	novel	964	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	213	junction_1	6078.86463494623	22670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCTTTAAACATTTTG	2416	False	NA	26	True	AATAAA	-19	NA	141027581	141031262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_141027602_141027820_141027945_141028638_141028688_141030916_141031016_141031144
ENSMUSG00000025508.14_141027582_141031262_3	chr7	+	424	5	NNC	ENSMUSG00000025508.14	novel	964	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6159.35911337373	87106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCTTTAAACATTTTG	2416	False	NA	26	True	AATAAA	-19	NA	141027581	141031262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031149
ENSMUSG00000025509.16_141035119_141040005_1	chr7	+	1966	9	FSM	ENSMUSG00000025509.16	ENSMUST00000164016.8	2625	9	8	651	0	0	multi-exon	FALSE	canonical	3	56	junction_3	8.3132048573339	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTCACTTCTGCAT	9953	False	NA	17	True	AATAAA	-18	NA	141035118	141040005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_141035387_141037185_141037419_141037504_141037571_141037917_141038128_141038342_141038404_141038504_141038673_141038757_141038891_141039079_141039203_141039301
ENSMUSG00000025510.15_141047305_141050842_1	chr7	+	1204	8	FSM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	-30	534	0	470	multi-exon	FALSE	canonical	3	214	junction_1	29.0537854500854	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCGTACTTGCCCCA	NA	False	NA	NA	False	NA	NA	NA	141047304	141050842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUSG00000025510.15_141047305_141050842_2	chr7	+	1322	8	FSM	ENSMUSG00000025510.15	ENSMUST00000106000.10	1865	8	-1	544	0	470	multi-exon	FALSE	canonical	3	98	junction_1	68.1968938187848	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCGTACTTGCCCCA	NA	False	NA	NA	False	NA	NA	NA	141047304	141050842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_141047498_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUSG00000025510.15_141048735_141050842_1	chr7	+	1076	7	FSM	ENSMUSG00000025510.15	ENSMUST00000058746.7	1619	7	0	543	0	470	multi-exon	FALSE	canonical	3	37	junction_1	95.130465969402	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCGTACTTGCCCCA	710	False	NA	NA	False	NA	NA	NA	141048734	141050842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_141048810_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUSG00000025512.16_141055153_141073335_1	chr7	-	1461	8	NIC	ENSMUSG00000025512.16	novel	3964	11	NA	NA	33045	17896	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGGGCTCTGGATCTTA	NA	False	NA	NA	False	NA	NA	NA	141073335	141055152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_141055411_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ENSMUSG00000025512.16_141055378_141073335_1	chr7	-	1236	8	NIC	ENSMUSG00000025512.16	novel	3964	11	NA	NA	33045	17671	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTCAAGGCAACACGAGAAA	NA	False	NA	NA	False	NA	NA	NA	141073335	141055377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_141055411_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ENSMUSG00000025512.16_141075262_141119732_1	chr7	-	1972	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	-3	2213	0	0	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGACCTACTTATTTCT	NA	False	NA	-22	True	NA	NA	NA	141119732	141075261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ENSMUSG00000025512.16_141075961_141119732_1	chr7	-	1273	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	-3	2912	0	0	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGAAAGCAACCCCCAAG	NA	False	NA	-84	True	NA	NA	NA	141119732	141075960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ENSMUSG00000025525.13_111221063_111282127_1	chrX	+	897	8	NIC	ENSMUSG00000025525.13	novel	1359	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	139.560973434992	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGTGGTAAAATCATAA	NA	False	NA	8	True	AATAAA	-16	NA	111221062	111282127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_111221134_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
ENSMUSG00000025531.15_111953300_112095208_1	chrX	-	1852	15	FSM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	6	3010	-2	-429	multi-exon	FALSE	canonical	3	145	junction_7	16.3001189428489	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACTTCTGTCCAGCCCC	NA	False	NA	NA	False	NA	NA	NA	112095208	111953299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ENSMUSG00000025532.14_130058169_130089630_1	chr5	+	1541	6	FSM	ENSMUSG00000025532.14	ENSMUST00000156729.2	669	6	-15	-857	0	0	multi-exon	FALSE	canonical	3	25	junction_1	131.765549367048	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCCACCATACCTGG	NA	False	NA	5	True	AAAACA	-1	NA	130058168	130089630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_130058336_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088545
ENSMUSG00000025533.16_130040345_130053186_1	chr5	-	1739	16	FSM	ENSMUSG00000025533.16	ENSMUST00000160129.8	2413	16	674	0	0	0	multi-exon	FALSE	canonical	1	102	junction_3	47.1472398155207	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGCATATGCTTCTGC	NA	False	NA	-10	True	AATAAA	-21	NA	130053186	130040344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882
ENSMUSG00000025533.16_130040345_130053186_2	chr5	-	1542	17	FSM	ENSMUSG00000025533.16	ENSMUST00000161094.8	1824	17	36	246	0	0	multi-exon	FALSE	canonical	1	102	junction_3	46.3975686324187	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGCATATGCTTCTGC	NA	False	NA	-10	True	AATAAA	-21	NA	130053186	130040344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
ENSMUSG00000025534.18_130017852_130031708_1	chr5	-	2505	12	FSM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	182	0	-2	0	multi-exon	TRUE	canonical	3	83	junction_6	16.6092675514317	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTTTCGTTACTATC	NA	False	NA	NA	False	NA	NA	NA	130031708	130017851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
ENSMUSG00000025534.18_130028440_130031708_1	chr5	-	1100	4	FSM	ENSMUSG00000025534.18	ENSMUST00000111308.8	2038	4	-2	940	-2	0	multi-exon	FALSE	canonical	3	115	junction_2	11.5854314646552	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTCGCTATTGTCTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	130031708	130028439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_130028911_130029201_130029384_130029597_130029784_130031447
ENSMUSG00000025537.13_129875852_129892273_2	chr5	-	1464	8	NIC	ENSMUSG00000025537.13	novel	2374	10	NA	NA	6655	16410	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCAGAGCGCATGCGTC	NA	False	NA	NA	False	NA	NA	NA	129892273	129875851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_129875928_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ENSMUSG00000025538.16_129875852_129892273_1	chr5	+	1615	9	NNC	ENSMUSG00000025538.16	novel	1656	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	160.091331354949	1519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	16	True	AATAAA	-16	NA	129875851	129892273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888683_129888763_129888910_129889056_129891479
ENSMUSG00000025538.16_129875852_129892273_2	chr5	+	1621	9	FSM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	25	618	0	0	multi-exon	FALSE	canonical	3	460	junction_6	14.1371629049113	1659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	16	True	AATAAA	-16	NA	129875851	129892273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ENSMUSG00000025538.16_129875852_129892273_3	chr5	+	1576	8	NIC	ENSMUSG00000025538.16	novel	1656	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_3	159.496401341273	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	16	True	AATAAA	-16	NA	129875851	129892273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_129875928_129878741_129878899_129881714_129881827_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ENSMUSG00000025538.16_129875852_129892273_4	chr5	+	1603	8	NNC	ENSMUSG00000025538.16	novel	1656	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	167.522889084886	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	16	True	AATAAA	-16	NA	129875851	129892273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_129875928_129878741_129878899_129881714_129881827_129883501_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ENSMUSG00000025545.11_122419116_122615599_1	chr14	+	960	5	ISM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	0	24047	0	-24040	5prime_fragment	FALSE	canonical	3	648	junction_1	14.6180539060437	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATGTTCAAGAATGTATG	NA	False	NA	4	True	AATAAA	-17	NA	122419115	122615599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195
ENSMUSG00000025545.11_122419116_122639646_1	chr14	+	742	4	NIC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	306.768461366042	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGGTTTTGCTATTGT	NA	False	NA	12	True	AATAAA	-22	NA	122419115	122639646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_122419194_122548655_122548843_122608652_122608842_122639358
ENSMUSG00000025545.11_122419116_122639646_2	chr14	+	1044	7	NIC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	249.458357691664	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGGTTTTGCTATTGT	NA	False	NA	12	True	AATAAA	-22	NA	122419115	122639646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_122419194_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ENSMUSG00000025545.11_122514913_122615599_1	chr14	+	965	5	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19460	-24040	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	245.382864112391	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATGTTCAAGAATGTATG	NA	False	NA	4	True	AATAAA	-17	NA	122514912	122615599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_122514996_122548655_122548843_122608652_122608842_122613293_122613396_122615195
ENSMUSG00000025545.11_122514913_122639646_1	chr14	+	1236	8	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19460	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	209.063900005989	1401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGGTTTTGCTATTGT	NA	False	NA	12	True	AATAAA	-22	NA	122514912	122639646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_122514996_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ENSMUSG00000025545.11_122514913_122639646_2	chr14	+	1397	9	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19460	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	295.938654960787	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGGTTTTGCTATTGT	NA	False	NA	12	True	AATAAA	-22	NA	122514912	122639646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_122514996_122517493_122517655_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ENSMUSG00000025557.11_121697802_121742669_1	chr14	-	2357	23	FSM	ENSMUSG00000025557.11	ENSMUST00000088386.8	3121	23	-5	769	-5	-769	multi-exon	FALSE	canonical	3	25	junction_3	5.65119017669934	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAATTTTTTAA	3133	False	NA	NA	False	TTTAAA	-5	NA	121742669	121697801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_121698186_121699878_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729103_121742630
ENSMUSG00000025557.11_121697802_121742845_1	chr14	-	2533	23	FSM	ENSMUSG00000025557.11	ENSMUST00000088386.8	3121	23	-181	769	-181	-769	multi-exon	FALSE	canonical	3	25	junction_3	5.65119017669934	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAATTTTTTAA	2957	False	NA	NA	False	TTTAAA	-5	NA	121742845	121697801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_121698186_121699878_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729103_121742630
ENSMUSG00000025574.14_117706352_117716673_1	chr11	-	1195	7	FSM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	245	0	0	0	multi-exon	FALSE	canonical	3	796	junction_5	107.729084074615	4006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTGTTTCTCCTTAGCC	NA	False	NA	-17	True	ATTAAA	-16	NA	117716673	117706351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716426_117716459_117716539
ENSMUSG00000025574.14_117706352_117716673_2	chr11	-	1163	6	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	149	junction_5	366.911215418662	3962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTGTTTCTCCTTAGCC	NA	False	NA	-17	True	ATTAAA	-16	NA	117716673	117706351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716539
ENSMUSG00000025574.14_117706352_117716673_3	chr11	-	1208	6	NNC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	425.922340339175	3976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTGTTTCTCCTTAGCC	NA	False	NA	-17	True	ATTAAA	-16	NA	117716673	117706351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715653_117716539
ENSMUSG00000025578.10_118929265_118931737_1	chr11	-	1388	5	FSM	ENSMUSG00000025578.10	ENSMUST00000026663.8	3580	5	58	2134	0	614	multi-exon	TRUE	canonical	3	19	junction_4	2.91547594742265	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCTTTTATTTAAACG	NA	False	NA	-1	True	AATATA	-16	NA	118931737	118929264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_118930346_118930757_118930825_118930919_118930986_118931173_118931218_118931607
ENSMUSG00000025579.15_119158852_119176280_1	chr11	+	3494	20	FSM	ENSMUSG00000025579.15	ENSMUST00000106259.9	3633	20	139	0	0	0	multi-exon	FALSE	canonical	3	393	junction_7	40.3001893687597	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119158851	119176280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ENSMUSG00000025580.16_119179189_119190844_1	chr11	-	1434	12	NNC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	403.933633367276	2841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	False	NA	-10	True	ATTAAA	-20	NA	119190844	119179188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186346_119186880_119186960_119188630_119188704_119190653
ENSMUSG00000025580.16_119179189_119190844_2	chr11	-	1040	9	NNC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	444.050391284593	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	False	NA	-10	True	ATTAAA	-20	NA	119190844	119179188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_119179386_119184430_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
ENSMUSG00000025580.16_119179189_119190844_4	chr11	-	1431	12	NNC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	403.051398399839	1702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	False	NA	-10	True	ATTAAA	-20	NA	119190844	119179188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186953_119188630_119188704_119190653
ENSMUSG00000025580.16_119179189_119190915_1	chr11	-	1500	12	NNC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	397.334528165785	6176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	False	NA	-10	True	ATTAAA	-20	NA	119190915	119179188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_119179386_119179485_119179605_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
ENSMUSG00000025580.16_119179189_119190915_2	chr11	-	1497	12	NNC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	397.334528165785	4404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	False	NA	-10	True	ATTAAA	-20	NA	119190915	119179188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_119179386_119179485_119179614_119179706_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
ENSMUSG00000025580.16_119179189_119190915_3	chr11	-	1502	12	NNC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	403.933633367276	6705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	False	NA	-10	True	ATTAAA	-20	NA	119190915	119179188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186355_119186892_119186960_119188630_119188704_119190653
ENSMUSG00000025591.7_66928995_66939173_1	chr8	-	1161	7	FSM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	-24	2013	0	-2013	multi-exon	FALSE	canonical	3	118	junction_5	270.629153804406	2418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTTAGTCTGCTT	NA	False	NA	97	True	AATACA	-1	NA	66939173	66928994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
ENSMUSG00000025591.7_66929107_66939173_1	chr8	-	1049	7	FSM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	-24	2125	0	-2125	multi-exon	FALSE	canonical	3	118	junction_5	270.629153804406	2029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTGTATGTAAGAATTT	NA	False	NA	-15	True	AATAAA	-15	NA	66939173	66929106	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
ENSMUSG00000025591.7_66929107_66939173_2	chr8	-	983	6	NNC	ENSMUSG00000025591.7	novel	4328	7	NA	NA	0	-2125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	341.591803180346	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTGTATGTAAGAATTT	NA	False	NA	-15	True	AATAAA	-15	NA	66939173	66929106	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934228_66936709_66936823_66939063
ENSMUSG00000025591.7_66929107_66939173_3	chr8	-	985	7	NNC	ENSMUSG00000025591.7	novel	4328	7	NA	NA	0	-2125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	307.119095610952	1707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTGTATGTAAGAATTT	NA	False	NA	-15	True	AATAAA	-15	NA	66939173	66929106	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934122_66934200_66935157_66935196_66936709_66936823_66939063
ENSMUSG00000025591.7_66929107_66939173_5	chr8	-	2507	6	NIC	ENSMUSG00000025591.7	novel	3150	7	NA	NA	0	-2125	intron_retention	FALSE	canonical	3	740	junction_4	84.295670114188	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTGTATGTAAGAATTT	NA	False	NA	-15	True	AATAAA	-15	NA	66939173	66929106	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66936823_66939063
ENSMUSG00000025607.16_30748411_30873687_1	chr6	-	3299	25	NNC	ENSMUSG00000025607.16	novel	3155	24	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_23	59.2400952808897	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCAAAGTTGCTATACT	NA	False	NA	-14	True	AATAAA	-15	NA	30873687	30748410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30872993_30873177_30873595
ENSMUSG00000025607.16_30792369_30873687_1	chr6	-	2020	14	ISM	ENSMUSG00000025607.16	ENSMUST00000166192.7	3155	24	42	43958	-4	8269	5prime_fragment	FALSE	canonical	3	177	junction_5	22.345326345065	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCTTGTTTCATTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	30873687	30792368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ENSMUSG00000025607.16_30862310_30873687_1	chr6	-	583	5	ISM	ENSMUSG00000025607.16	ENSMUST00000131256.8	961	10	-22	26948	-4	9522	5prime_fragment	FALSE	canonical	3	203	junction_3	12.6293309403151	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGTAAACCATTCTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	30873687	30862309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ENSMUSG00000025613.14_87280763_87292747_1	chr16	-	1831	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	14	549	0	113	multi-exon	FALSE	canonical	3	4287	junction_9	381.591725405517	17239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTGTTTAATCACT	NA	False	NA	-24	True	AATAAA	-14	NA	87292747	87280762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ENSMUSG00000025613.14_87280876_87292747_1	chr16	-	1718	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	14	662	0	0	multi-exon	FALSE	canonical	3	4287	junction_9	381.591725405517	15010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTTGTCATAGGTTAAG	NA	False	NA	-70	True	NA	NA	NA	87292747	87280875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ENSMUSG00000025616.15_87251915_87280198_1	chr16	+	2674	18	FSM	ENSMUSG00000025616.15	ENSMUST00000026710.12	3205	18	324	207	0	0	multi-exon	FALSE	canonical	3	153	junction_5	31.0441141639032	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTTCACCTAAGTAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	87251914	87280198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ENSMUSG00000025616.15_87251915_87280405_1	chr16	+	2881	18	FSM	ENSMUSG00000025616.15	ENSMUST00000026710.12	3205	18	324	0	0	0	multi-exon	FALSE	canonical	3	153	junction_5	31.0441141639032	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATTAGAGTTTAAGT	NA	False	NA	10	True	AATAAA	-18	NA	87251914	87280405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ENSMUSG00000025626.17_52001143_52042882_1	chrX	+	1412	11	FSM	ENSMUSG00000025626.17	ENSMUST00000078944.13	4350	11	0	2938	0	-1960	multi-exon	FALSE	canonical	3	199	junction_10	29.4423164849507	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCGACTCTTAGATCCT	NA	False	NA	10	True	AATAAA	-18	NA	52001142	52042882	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_52001314_52005429_52005614_52006042_52006145_52020449_52020584_52020857_52020902_52029101_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
ENSMUSG00000025630.9_52077014_52110107_1	chrX	+	860	9	FSM	ENSMUSG00000025630.9	ENSMUST00000026723.9	1289	9	0	429	0	-429	multi-exon	FALSE	canonical	3	2155	junction_4	129.05328356923	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAATGTTACTGTTTTAT	NA	False	NA	27	True	AGTAAA	-20	NA	52077013	52110107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52101153_52101172_52105223_52105307_52108981_52109029_52109199_52109277_52109943
ENSMUSG00000025630.9_52077014_52110537_1	chrX	+	1286	8	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	818.20507882829	8694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTTTTGAATTCTTTC	NA	False	NA	13	True	AATAAA	-17	NA	52077013	52110537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097610_52105223_52105307_52108981_52109029_52109199_52109277_52109943
ENSMUSG00000025647.17_108883931_108886792_1	chr9	+	1555	4	FSM	ENSMUSG00000025647.17	ENSMUST00000154184.5	1038	4	0	-517	0	0	multi-exon	FALSE	canonical	3	51	junction_1	98.8005847935909	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTCTTCAGCGCCT	NA	False	NA	18	True	AATAAA	-18	NA	108883930	108886792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108884076_108885045_108885162_108885354_108885574_108885717
ENSMUSG00000025666.17_80114304_80139502_1	chrX	+	2049	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	-18	1976	0	165	multi-exon	TRUE	canonical	3	148	junction_2	10.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTAAAAGTCTCAGTAGA	NA	False	NA	NA	False	AATAAA	-25	NA	80114303	80139502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_80114767_80127896_80128038_80138057
ENSMUSG00000025666.17_80114304_80140601_1	chrX	+	3148	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	-18	877	0	-877	multi-exon	FALSE	canonical	3	148	junction_2	10.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACGAGCCCTAAGCTACA	NA	False	NA	NA	False	AATAGA	-29	NA	80114303	80140601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_80114767_80127896_80128038_80138057
ENSMUSG00000025722.17_80541009_80550982_1	chr7	-	1541	8	FSM	ENSMUSG00000025722.17	ENSMUST00000026816.15	2114	8	35	538	0	0	multi-exon	FALSE	canonical	3	95	junction_7	16.071269840486	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGCAATTAGCAATTTA	NA	False	NA	-7	True	AATAAA	-20	NA	80550982	80541008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
ENSMUSG00000025722.17_80541009_80550982_2	chr7	-	1452	7	NIC	ENSMUSG00000025722.17	novel	2114	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	46.1173021278951	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGCAATTAGCAATTTA	NA	False	NA	-7	True	AATAAA	-20	NA	80550982	80541008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80550095_80550185_80550391_80550460_80550932
ENSMUSG00000025724.13_80565125_80597293_1	chr7	-	1110	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	235	0	0	0	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	3554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTTCCCTGAATTCTGT	1620	False	NA	-5	True	AATAAA	-18	NA	80597293	80565124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
ENSMUSG00000025724.13_80565314_80597293_1	chr7	-	233	3	NNC	ENSMUSG00000025724.13	novel	1345	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	486.5	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCCAGTGTTTGTAT	1620	False	NA	-11	True	ATTAAA	-11	NA	80597293	80565313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_80565370_80584851_80584885_80597149
ENSMUSG00000025724.13_80565314_80597293_2	chr7	-	921	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	235	189	0	0	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	2856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCCAGTGTTTGTAT	1620	False	NA	-11	True	ATTAAA	-11	NA	80597293	80565313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
ENSMUSG00000025724.13_80565314_80597490_1	chr7	-	1118	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	38	189	0	0	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	3114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCCAGTGTTTGTAT	1423	False	NA	-11	True	ATTAAA	-11	NA	80597490	80565313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
ENSMUSG00000025726.12_80791606_80820164_1	chr7	+	1855	8	NIC	ENSMUSG00000025726.12	novel	2846	18	NA	NA	27008	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	42.0490481340493	491	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTACAGTGTG	NA	False	NA	11	True	AATAAA	-20	NA	80791605	80820164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_80791793_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ENSMUSG00000025726.12_80791658_80814597_1	chr7	+	885	5	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	27060	5567	27060	-5567	internal_fragment	FALSE	canonical	3	108	junction_1	5.1478150704935	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGTCATAACCTAATG	NA	False	NA	NA	False	TATAAA	-20	NA	80791657	80814597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273
ENSMUSG00000025726.12_80791658_80820164_1	chr7	+	1929	9	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	27060	0	27060	0	3prime_fragment	FALSE	canonical	3	108	junction_1	7.38135319572231	573	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTACAGTGTG	NA	False	NA	11	True	AATAAA	-20	NA	80791657	80820164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ENSMUSG00000025731.17_26094474_26096134_1	chr17	+	808	6	FSM	ENSMUSG00000025731.17	ENSMUST00000026827.16	1243	6	426	9	0	0	multi-exon	FALSE	canonical	3	287	junction_5	67.7542618585724	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGCTTGCTGGGAAT	7194	False	NA	30	True	AATAAA	-31	NA	26094473	26096134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634_26095714_26095923
ENSMUSG00000025731.17_26094474_26096134_2	chr17	+	645	5	NIC	ENSMUSG00000025731.17	novel	1243	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	176.700841820292	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGCTTGCTGGGAAT	7194	False	NA	30	True	AATAAA	-31	NA	26094473	26096134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_26094701_26095193_26095254_26095468_26095537_26095634_26095714_26095923
ENSMUSG00000025732.7_26082672_26087708_1	chr17	-	860	5	NIC	ENSMUSG00000025732.7	novel	945	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	117.099049953448	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	7792	False	NA	-4	True	AATAAA	-15	NA	26087708	26082671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_26083014_26083176_26083327_26083567_26083696_26087387_26087518_26087598
ENSMUSG00000025733.18_26057431_26063499_1	chr17	-	2863	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	326	0	0	0	multi-exon	FALSE	canonical	3	133	junction_18	11.3871272350258	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGACTGCTGTTTTTGTGT	6013	False	NA	0	True	NA	NA	NA	26063499	26057430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ENSMUSG00000025733.18_26057814_26063499_1	chr17	-	2480	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	326	383	0	0	multi-exon	FALSE	canonical	3	133	junction_18	11.3871272350258	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCTTGGATTTTGATCT	6013	False	NA	-4	True	ATTAAA	-17	NA	26063499	26057813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ENSMUSG00000025736.16_26049479_26051893_2	chr17	+	1361	7	NIC	ENSMUSG00000025736.16	novel	622	4	NA	NA	666	1076	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCGCCCGGTCGGCGAT	NA	False	NA	NA	False	NA	NA	NA	26049478	26051893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26051665
ENSMUSG00000025736.16_26049608_26051893_1	chr17	+	1410	6	NIC	ENSMUSG00000025736.16	novel	622	4	NA	NA	795	1076	intron_retention	FALSE	non_canonical	0	0	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCGCCCGGTCGGCGAT	NA	False	NA	NA	False	NA	NA	NA	26049607	26051893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_26049985_26050075_26050193_26050282_26050606_26050769_26050936_26051019_26051219_26051665
ENSMUSG00000025736.16_26049608_26051893_2	chr17	+	1358	6	NNC	ENSMUSG00000025736.16	novel	622	4	NA	NA	795	1076	intron_retention	FALSE	non_canonical	0	0	junction_1	0	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCGCCCGGTCGGCGAT	NA	False	NA	NA	False	NA	NA	NA	26049607	26051893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_26049985_26050075_26050193_26050282_26050606_26050769_26050884_26051019_26051219_26051665
ENSMUSG00000025739.14_25938021_25946384_1	chr17	+	3084	22	NIC	ENSMUSG00000025739.14	novel	719	3	NA	NA	1519	8004	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCGAGAGCCTCCAATAC	NA	False	NA	NA	False	NA	NA	NA	25938020	25946384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ENSMUSG00000025742.6_166129970_166165722_1	chrX	-	3024	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	23	652	-16	-652	multi-exon	FALSE	canonical	3	187	junction_5	11.6535640709422	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGGCATGACAAAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	166165722	166129969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ENSMUSG00000025742.6_166131425_166165722_1	chrX	-	1569	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	23	2107	-16	-2107	multi-exon	FALSE	canonical	3	187	junction_5	11.6535640709422	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTTTTTTCTTAA	NA	False	NA	-3	True	NA	NA	NA	166165722	166131424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ENSMUSG00000025745.13_30324424_30359975_2	chr5	-	2562	19	NNC	ENSMUSG00000025745.13	novel	2552	20	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.538053761205	1662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGGCCTGTTTTCTTCT	NA	False	NA	-3	True	AATAAA	-23	NA	30359975	30324423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_30324959_30325687_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
ENSMUSG00000025747.13_30265816_30278596_1	chr5	-	1153	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	19	1991	-12	246	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	6552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCAATGGGCCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	30278596	30265815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ENSMUSG00000025747.13_30266062_30278596_1	chr5	-	901	7	NNC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	147	junction_1	646.59355256778	1067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGAAGACTTTCAGATT	NA	False	NA	-89	True	NA	NA	NA	30278596	30266061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_30266126_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ENSMUSG00000025747.13_30266062_30278596_2	chr5	-	907	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	19	2237	-12	0	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	3636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGAAGACTTTCAGATT	NA	False	NA	-89	True	NA	NA	NA	30278596	30266061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ENSMUSG00000025747.13_30266062_30278596_3	chr5	-	805	7	NIC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_5	669.869058514838	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGAAGACTTTCAGATT	NA	False	NA	-89	True	NA	NA	NA	30278596	30266061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273537_30276631_30276706_30278358
ENSMUSG00000025747.13_30266062_30278596_4	chr5	-	917	7	NIC	ENSMUSG00000025747.13	novel	3884	8	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_2	658.000105538661	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGAAGACTTTCAGATT	NA	False	NA	-89	True	NA	NA	NA	30278596	30266061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_30266132_30266965_30267048_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ENSMUSG00000025758.11_40754477_40770904_1	chr3	+	3042	16	FSM	ENSMUSG00000025758.11	ENSMUST00000026858.11	3479	16	23	414	0	52	multi-exon	FALSE	canonical	3	256	junction_10	36.6472675955824	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGATTTTTTAAATTT	7808	False	NA	NA	False	AATAAA	-23	NA	40754476	40770904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ENSMUSG00000025759.12_40772538_40801153_1	chr3	-	2984	12	FSM	ENSMUSG00000025759.12	ENSMUST00000026859.11	3151	12	167	0	-24	0	multi-exon	FALSE	canonical	3	17	junction_5	6.38308715692435	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATGAAGAGGACCTGAAT	NA	False	NA	16	True	AATAAA	-34	NA	40801153	40772537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789845_40791523_40791568_40793848_40793941_40801075
ENSMUSG00000025764.15_41510166_41568778_1	chr3	+	2960	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	0	2521	0	285	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	2519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTGAATACTCACTCTT	NA	False	NA	NA	False	NA	NA	NA	41510165	41568778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ENSMUSG00000025781.15_10060841_10085243_1	chr2	-	1082	10	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1443.13855498663	9589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9582	False	NA	-2	True	AATAAA	-19	NA	10085243	10060840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_10060967_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUSG00000025781.15_10060841_10085243_10	chr2	-	1079	10	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1443.13855498663	4118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9582	False	NA	-2	True	AATAAA	-19	NA	10085243	10060840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_10060964_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUSG00000025781.15_10060841_10085243_2	chr2	-	1080	10	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1434.96070406901	11345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9582	False	NA	-2	True	AATAAA	-19	NA	10085243	10060840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074531_10085158
ENSMUSG00000025781.15_10060841_10085243_3	chr2	-	968	10	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1419.22545386168	943	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9582	False	NA	-2	True	AATAAA	-19	NA	10085243	10060840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068310_10068949_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUSG00000025781.15_10060841_10085243_4	chr2	-	1077	10	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1437.38539210335	13894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9582	False	NA	-2	True	AATAAA	-19	NA	10085243	10060840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069112_10073420_10073553_10074503_10074539_10085158
ENSMUSG00000025781.15_10060841_10085243_5	chr2	-	1076	9	NNC	ENSMUSG00000025781.15	novel	1735	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1506.61847671366	2660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9582	False	NA	-2	True	AATAAA	-19	NA	10085243	10060840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10085135
ENSMUSG00000025781.15_10060841_10085243_6	chr2	-	1053	9	NIC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	1506.61847671366	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9582	False	NA	-2	True	AATAAA	-19	NA	10085243	10060840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10085158
ENSMUSG00000025781.15_10060841_10085243_7	chr2	-	1049	9	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1529.55171128668	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9582	False	NA	-2	True	AATAAA	-19	NA	10085243	10060840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_10060967_10063802_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUSG00000025781.15_10060841_10085243_8	chr2	-	1084	10	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1443.13855498663	22715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9582	False	NA	-2	True	AATAAA	-19	NA	10085243	10060840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_10060964_10061575_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUSG00000025781.15_10060841_10085243_9	chr2	-	1093	10	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1443.13855498663	24551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9582	False	NA	-2	True	AATAAA	-19	NA	10085243	10060840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_10060973_10061575_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUSG00000025782.13_9957165_10053417_1	chr2	-	1207	3	ISM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	-10	37802	-10	-36276	5prime_fragment	FALSE	canonical	3	137	junction_1	7	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAGACCTGAAACACCAA	NA	False	NA	NA	False	NA	NA	NA	10053417	9957164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_9957757_10047237_10047481_10053045
ENSMUSG00000025792.10_120382714_120389256_1	chr11	+	1218	11	FSM	ENSMUSG00000025792.10	ENSMUST00000026899.4	2023	11	48	757	0	153	multi-exon	FALSE	canonical	3	77	junction_8	8.74356906531881	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGCCTGGCTGGTGTC	NA	False	NA	NA	False	NA	NA	NA	120382713	120389256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
ENSMUSG00000025794.10_120400580_120403501_1	chr9	+	720	6	FSM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	70	219	0	0	multi-exon	FALSE	canonical	3	10044	junction_1	2651.61525112525	129827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	NA	False	NA	19	True	AATAAA	-23	NA	120400579	120403501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ENSMUSG00000025809.16_129448931_129459681_1	chr8	+	1974	5	ISM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	36796	0	-1883	0	3prime_fragment	FALSE	canonical	3	537	junction_4	29.4310635213884	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTTGGCTCTGTATT	NA	False	NA	16	True	AATAAA	-22	NA	129448930	129459681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ENSMUSG00000025812.19_128306205_128338767_1	chr8	+	2184	4	FSM	ENSMUSG00000025812.19	ENSMUST00000159940.2	746	4	0	-1438	0	0	multi-exon	FALSE	canonical	3	17	junction_1	28.2410261066335	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	False	NA	13	True	AATAAA	-21	NA	128306204	128338767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_128306285_128319541_128319663_128329539_128329668_128336912
ENSMUSG00000025815.14_5934991_5947563_1	chr2	-	1201	3	ISM	ENSMUSG00000025815.14	ENSMUST00000026924.7	3852	18	-9	33002	-9	-5298	5prime_fragment	FALSE	canonical	3	50	junction_2	4	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTGGATAGCATTAGAC	NA	False	NA	NA	False	AATAAA	-17	NA	5947563	5934990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_5935798_5937197_5937354_5947325
ENSMUSG00000025816.16_5875967_5900145_1	chr2	-	2181	12	FSM	ENSMUSG00000025816.16	ENSMUST00000102981.10	2448	12	98	169	0	-127	multi-exon	FALSE	canonical	3	221	junction_3	37.3630833845388	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCCAGTTCTCAAGCAG	NA	False	NA	NA	False	NA	NA	NA	5900145	5875966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ENSMUSG00000025816.16_5876161_5900145_1	chr2	-	1987	12	FSM	ENSMUSG00000025816.16	ENSMUST00000102981.10	2448	12	98	363	0	245	multi-exon	FALSE	canonical	3	221	junction_3	37.3630833845388	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCAGCCTGGATGGGCAA	NA	False	NA	NA	False	NA	NA	NA	5900145	5876160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ENSMUSG00000025817.13_5849845_5873551_1	chr2	+	1596	9	NNC	ENSMUSG00000025817.13	novel	1590	10	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	239.550490502524	2146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	1717	False	NA	NA	False	NA	NA	NA	5849844	5873551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ENSMUSG00000025817.13_5849845_5873551_2	chr2	+	1411	9	NNC	ENSMUSG00000025817.13	novel	1590	10	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	311.915828990771	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	1717	False	NA	NA	False	NA	NA	NA	5849844	5873551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_5850012_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ENSMUSG00000025817.13_5850064_5873118_1	chr2	+	944	9	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	0	-429	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	239.550490502524	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCACAGATGCATGTGGT	1936	False	NA	NA	False	CATAAA	-19	NA	5850063	5873118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ENSMUSG00000025817.13_5850064_5873551_1	chr2	+	1377	9	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	239.550490502524	1786	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	1936	False	NA	NA	False	NA	NA	NA	5850063	5873551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ENSMUSG00000025817.13_5850064_5873551_2	chr2	+	1366	9	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	3	49	junction_7	223.812107302085	645	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	1936	False	NA	NA	False	NA	NA	NA	5850063	5873551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871164_5871219_5872899
ENSMUSG00000025817.13_5850064_5873551_3	chr2	+	1460	10	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	330.348002066209	437	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	1936	False	NA	NA	False	NA	NA	NA	5850063	5873551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_5850197_5852918_5853002_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ENSMUSG00000025817.13_5861179_5861372_1	chr2	+	165	2	NNC	ENSMUSG00000025817.13	novel	1677	3	NA	NA	8233	-859	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	48890	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTGCAGACTTCGAAGTA	8327	False	NA	NA	False	NA	NA	NA	5861178	5861372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_5861290_5861318
ENSMUSG00000025823.10_47773075_47790298_1	chr6	-	2322	10	NNC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	616.10865644236	3185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTGCCTTTTATTTT	8956	False	NA	23	True	TTTAAA	-24	NA	47790298	47773074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_47773827_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ENSMUSG00000025823.10_47773075_47790298_2	chr6	-	2324	10	NNC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_9	566.134870289779	3179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTGCCTTTTATTTT	8956	False	NA	23	True	TTTAAA	-24	NA	47790298	47773074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785269_47790150
ENSMUSG00000025825.13_113910979_113916334_1	chr5	+	772	5	FSM	ENSMUSG00000025825.13	ENSMUST00000026937.12	957	5	170	15	-87	0	multi-exon	FALSE	canonical	3	687	junction_1	28.9179874818425	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	3765	False	NA	NA	False	AATAAA	-15	NA	113910978	113916334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113914911_113915893
ENSMUSG00000025839.4_87319431_87327461_1	chr2	-	2158	4	NIC	ENSMUSG00000025839.4	novel	1861	3	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	7.40870359029762	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATTTATTTATTTAT	NA	False	NA	-7	True	AATAAA	-16	NA	87327461	87319430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_87320426_87321167_87321750_87322478_87322789_87327190
ENSMUSG00000025856.16_138962143_138980720_1	chr5	-	1614	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	72	374	-12	128	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTATTTCTGATGCGCC	NA	False	NA	-13	True	AATAAA	-18	NA	138980720	138962142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
ENSMUSG00000025856.16_138962143_138982180_1	chr5	-	1584	6	NIC	ENSMUSG00000025856.16	novel	1363	8	NA	NA	-338	128	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	159.261294732901	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTATTTCTGATGCGCC	NA	False	NA	-13	True	AATAAA	-18	NA	138982180	138962142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138981953
ENSMUSG00000025856.16_138962697_138980720_1	chr5	-	1060	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	72	928	-12	0	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAACAAAAAAAACAA	NA	False	NA	NA	False	AAAACA	-43	NA	138980720	138962696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
ENSMUSG00000025858.13_139238321_139255084_1	chr5	+	1143	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	242	722	196	0	multi-exon	FALSE	canonical	3	1098	junction_8	59.685503893324	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCTCTGCTTCCTTG	NA	False	NA	NA	False	AATAAA	-31	NA	139238320	139255084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
ENSMUSG00000025869.12_54732558_54737871_1	chr13	-	1164	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	32	560	0	-209	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	2467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTGTTTACTGTGC	NA	False	NA	-2	True	ATTAAA	-16	NA	54737871	54732557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
ENSMUSG00000025869.12_54732647_54737885_1	chr13	-	1089	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	18	649	-14	-298	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	2428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACTAGGTGGGTTTTTG	NA	False	NA	-24	True	GATAAA	-21	NA	54737885	54732646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
ENSMUSG00000025871.19_54699637_54713169_1	chr13	-	2042	9	FSM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	79	606	0	572	multi-exon	FALSE	canonical	3	520	junction_7	24.8696602308918	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACTGAAGATTAAGCCCA	NA	False	NA	NA	False	NA	NA	NA	54713169	54699636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
ENSMUSG00000025872.6_54607630_54616639_1	chr13	-	1327	6	NNC	ENSMUSG00000025872.6	novel	2335	6	NA	NA	0	-980	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	220.866837709965	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACGGCCCAAAAATCT	NA	False	NA	NA	False	CATAAA	-42	NA	54616639	54607629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614193_54615638_54615796_54616353
ENSMUSG00000025873.17_54769597_54809510_2	chr13	+	1817	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	0	111	combination_of_known_junctions	TRUE	canonical	0	0	junction_3	175.481418945317	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGCATCCTTTGCCACT	NA	False	NA	23	True	AATAAA	-16	NA	54769596	54809510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ENSMUSG00000025875.15_54937408_54944589_1	chr13	+	1367	8	FSM	ENSMUSG00000025875.15	ENSMUST00000026993.14	1585	8	218	0	0	0	multi-exon	FALSE	canonical	3	352	junction_3	20.9606044468071	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATGTTCACCGT	NA	False	NA	18	True	AATAAA	-19	NA	54937407	54944589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ENSMUSG00000025875.15_54940553_54944589_1	chr13	+	1225	6	FSM	ENSMUSG00000025875.15	ENSMUST00000130568.9	614	6	0	-611	0	0	multi-exon	FALSE	canonical	3	33	junction_3	145.627744609329	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATGTTCACCGT	NA	False	NA	18	True	AATAAA	-19	NA	54940552	54944589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_54940700_54941007_54941179_54942865_54942992_54943227_54943272_54943778_54943896_54943969
ENSMUSG00000025875.15_54940684_54944589_1	chr13	+	1094	6	FSM	ENSMUSG00000025875.15	ENSMUST00000130568.9	614	6	131	-611	0	0	multi-exon	FALSE	canonical	3	33	junction_3	145.627744609329	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATGTTCACCGT	NA	False	NA	18	True	AATAAA	-19	NA	54940683	54944589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_54940700_54941007_54941179_54942865_54942992_54943227_54943272_54943778_54943896_54943969
ENSMUSG00000025878.17_55176108_55248067_1	chr13	-	2475	15	FSM	ENSMUSG00000025878.17	ENSMUST00000127195.8	2936	15	46	415	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	39.2030949423795	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATCTTATTTCAATAG	NA	False	NA	NA	False	AATATA	-12	NA	55248067	55176107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223804_55224110_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ENSMUSG00000025878.17_55176108_55248113_1	chr13	-	2224	16	NNC	ENSMUSG00000025878.17	novel	2931	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	48.0872355435642	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATCTTATTTCAATAG	NA	False	NA	NA	False	AATATA	-12	NA	55248113	55176107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223272_55223568_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ENSMUSG00000025878.17_55223835_55248067_1	chr13	-	809	5	ISM	ENSMUSG00000025878.17	ENSMUST00000148702.8	2489	14	0	47827	0	-886	5prime_fragment	FALSE	canonical	3	94	junction_1	28.5689954321114	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTACTTTTTCTCAAATA	NA	False	NA	NA	False	ATTAAA	-17	NA	55248067	55223834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ENSMUSG00000025889.14_60708559_60805856_1	chr6	-	1152	6	FSM	ENSMUSG00000025889.14	ENSMUST00000114268.5	1280	6	132	-4	0	0	multi-exon	FALSE	canonical	2	14	junction_1	4.2614551505325	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGGTTCCTTTTAC	7706	False	NA	-2	True	AATAAA	-24	NA	60805856	60708558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_60709146_60710087_60710172_60792600_60792744_60795307_60795350_60804464_60804612_60805707
ENSMUSG00000025893.9_4309716_4330073_1	chr9	+	794	4	FSM	ENSMUSG00000025893.9	ENSMUST00000212221.2	2313	4	-119	1638	-117	-1638	multi-exon	TRUE	canonical	3	18	junction_1	18.4571575998762	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGCATTTGTTATCTC	NA	False	NA	NA	False	AATAAA	-19	NA	4309715	4330073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_4309935_4313701_4313807_4316826_4317072_4329848
ENSMUSG00000025893.9_4309835_4330073_1	chr9	+	675	4	FSM	ENSMUSG00000025893.9	ENSMUST00000212221.2	2313	4	0	1638	0	-1638	multi-exon	FALSE	canonical	3	18	junction_1	18.4571575998762	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGCATTTGTTATCTC	0	True	NA	NA	False	AATAAA	-19	NA	4309834	4330073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_4309935_4313701_4313807_4316826_4317072_4329848
ENSMUSG00000025894.12_4295957_4309467_1	chr9	-	1331	4	NIC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	0	-992	combination_of_known_splicesites	FALSE	canonical	3	71	junction_3	376.029549666276	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCGTCTTAGGGTTTC	1	True	NA	43	True	AGTAAA	-22	NA	4309467	4295956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4309253
ENSMUSG00000025894.12_4295957_4309467_2	chr9	-	1645	6	FSM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	2	1163	0	-992	multi-exon	FALSE	canonical	3	41	junction_5	303.486671865504	2133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCGTCTTAGGGTTTC	1	True	NA	43	True	AGTAAA	-22	NA	4309467	4295956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309287
ENSMUSG00000025894.12_4296595_4309467_1	chr9	-	1007	6	FSM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	2	1801	0	-1630	multi-exon	FALSE	canonical	3	41	junction_5	303.486671865504	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATTTAACAAAACATTT	1	True	NA	NA	False	AATAAA	-19	NA	4309467	4296594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309287
ENSMUSG00000025894.12_4296595_4309467_2	chr9	-	693	4	NIC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	0	-1630	combination_of_known_splicesites	FALSE	canonical	3	71	junction_3	376.029549666276	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATTTAACAAAACATTT	1	True	NA	NA	False	AATAAA	-19	NA	4309467	4296594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4309253
ENSMUSG00000025894.12_4296595_4309467_3	chr9	-	919	5	NIC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	0	-1630	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	350.365077454931	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATTTAACAAAACATTT	1	True	NA	NA	False	AATAAA	-19	NA	4309467	4296594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4308693_4308920_4309253
ENSMUSG00000025894.12_4296595_4309467_4	chr9	-	1041	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	0	1802	0	-1630	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	1690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATTTAACAAAACATTT	1	True	NA	NA	False	AATAAA	-19	NA	4309467	4296594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
ENSMUSG00000025898.7_3404088_3430527_1	chr9	+	868	8	FSM	ENSMUSG00000025898.7	ENSMUST00000212128.2	2283	8	0	1415	0	-1415	multi-exon	FALSE	canonical	3	200	junction_7	39.8200031775642	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATATTCAGATAGAGCACA	9	True	NA	NA	False	AAAAAG	-33	NA	3404087	3430527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437
ENSMUSG00000025903.15_4878053_4916962_1	chr1	+	2323	10	NNC	ENSMUSG00000025903.15	novel	2507	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	255.298711510194	1295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTATATAGTACTGTT	NA	False	NA	21	True	AATAAA	-22	NA	4878052	4916962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185_4915873_4916049
ENSMUSG00000025903.15_4878115_4916962_1	chr1	+	2324	7	NIC	ENSMUSG00000025903.15	novel	2507	9	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	282.033094984732	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTATATAGTACTGTT	NA	False	NA	21	True	AATAAA	-22	NA	4878114	4916962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_4878206_4878677_4878710_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ENSMUSG00000025903.15_4878115_4916962_2	chr1	+	1892	10	NNC	ENSMUSG00000025903.15	novel	2507	9	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	255.298711510194	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTATATAGTACTGTT	NA	False	NA	21	True	AATAAA	-22	NA	4878114	4916962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185_4915529_4916074
ENSMUSG00000025903.15_4878115_4916962_4	chr1	+	2213	10	NNC	ENSMUSG00000025903.15	novel	2507	9	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	255.298711510194	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTATATAGTACTGTT	NA	False	NA	21	True	AATAAA	-22	NA	4878114	4916962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185_4915855_4916079
ENSMUSG00000025903.15_4878115_4916962_5	chr1	+	2430	8	NNC	ENSMUSG00000025903.15	novel	2507	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	279.122604909435	1861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTATATAGTACTGTT	NA	False	NA	21	True	AATAAA	-22	NA	4878114	4916962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_4878210_4898786_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ENSMUSG00000025911.15_9618280_9646963_1	chr1	+	1825	12	NNC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	0	-163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.4879650744496	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTGTTTCATAAAAGC	NA	False	NA	NA	False	AATAAA	-23	NA	9618279	9646963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_9618377_9623147_9623206_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
ENSMUSG00000025917.10_10095068_10108166_1	chr1	-	1267	8	NNC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	347.314478446804	2671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCACGTGAAATTGTCCT	NA	False	NA	-25	True	AATAAA	-2	NA	10108166	10095067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_10095289_10097327_10097470_10100819_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
ENSMUSG00000025925.15_15875870_15913579_1	chr1	+	1571	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	0	697	0	-115	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATTCAGTACCCCATCC	NA	False	NA	-64	True	AATATA	-17	NA	15875869	15913579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ENSMUSG00000025925.15_15875881_15913367_1	chr1	+	1348	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	11	909	0	-327	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGTTTACAATTTCCT	NA	False	NA	4	True	GATAAA	-15	NA	15875880	15913367	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ENSMUSG00000025925.15_15875881_15913694_1	chr1	+	1668	10	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	327.088767352832	1940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCCACCTAGCATTGA	NA	False	NA	51	True	TATAAA	-11	NA	15875880	15913694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889164_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ENSMUSG00000025925.15_15875881_15913694_2	chr1	+	1675	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	11	582	0	0	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCCACCTAGCATTGA	NA	False	NA	51	True	TATAAA	-11	NA	15875880	15913694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ENSMUSG00000025925.15_15875881_15913694_3	chr1	+	1668	10	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	326.073952075633	1864	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCCACCTAGCATTGA	NA	False	NA	51	True	TATAAA	-11	NA	15875880	15913694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886116_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ENSMUSG00000025930.7_14823570_14825603_1	chr1	-	1167	3	FSM	ENSMUSG00000025930.7	ENSMUST00000190719.2	741	3	-26	-400	-26	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATTGTAAAAGTTCTT	NA	False	NA	4	True	AATAAA	-21	NA	14825603	14823569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_14824550_14824729_14824767_14825453
ENSMUSG00000025930.7_14823570_14825603_2	chr1	-	1130	2	FSM	ENSMUSG00000025930.7	ENSMUST00000027062.7	1741	2	611	0	-26	0	multi-exon	FALSE	canonical	3	23	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATTGTAAAAGTTCTT	NA	False	NA	4	True	AATAAA	-21	NA	14825603	14823569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_14824550_14825453
ENSMUSG00000025933.16_21288886_21300391_2	chr1	+	830	6	NNC	ENSMUSG00000025933.16	novel	1168	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	36.1054012579835	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTCATTCATTTCTAT	NA	False	NA	17	True	AATAAA	-17	NA	21288885	21300391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21299814_21300055_21300305
ENSMUSG00000025933.16_21289069_21300391_3	chr1	+	647	6	NNC	ENSMUSG00000025933.16	novel	1168	5	NA	NA	183	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	36.1054012579835	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTCATTCATTTCTAT	NA	False	NA	17	True	AATAAA	-17	NA	21289068	21300391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21299814_21300055_21300305
ENSMUSG00000025934.16_21323509_21326381_2	chr1	+	530	3	Genic_Genomic	ENSMUSG00000025934.16	novel	2792	1	NA	NA	-236	-155	multi-exon	FALSE	non_canonical	0	0	junction_1	0	652	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTACCTAGTCAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	21323508	21326381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_21323669_21324392_21324598_21326216
ENSMUSG00000025934.16_21327083_21335437_1	chr1	+	1017	6	NNC	ENSMUSG00000025934.16	novel	1457	7	NA	NA	3338	192	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	18.4867520132661	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGAGTATTCGAACATT	NA	False	NA	14	True	AATAAA	-20	NA	21327082	21335437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_21327270_21327554_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
ENSMUSG00000025934.16_21327400_21335437_1	chr1	+	985	5	ISM	ENSMUSG00000025934.16	ENSMUST00000121676.8	894	8	16569	-192	3655	192	3prime_fragment	FALSE	canonical	3	69	junction_1	2	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGAGTATTCGAACATT	NA	False	NA	14	True	AATAAA	-20	NA	21327399	21335437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
ENSMUSG00000025935.11_13636442_13660099_1	chr1	-	1383	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	35	1520	0	-1520	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCTGTTGTCCTGTTC	9691	False	NA	-5	True	AATACA	-16	NA	13660099	13636441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ENSMUSG00000025935.11_13636513_13660099_1	chr1	-	1312	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	35	1591	0	-1591	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGCTTTCTGCTCTATC	9691	False	NA	-76	True	NA	NA	NA	13660099	13636512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ENSMUSG00000025937.7_13696117_13730770_1	chr1	-	1931	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	0	2563	0	-2563	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	8819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTGTATGAATATTT	NA	False	NA	35	True	TTTAAA	-40	NA	13730770	13696116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ENSMUSG00000025937.7_13696521_13730770_1	chr1	-	1527	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	0	2967	0	-2967	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	6932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCGACACACTTCCTCCAA	NA	False	NA	NA	False	NA	NA	NA	13730770	13696520	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ENSMUSG00000025937.7_13696976_13730770_1	chr1	-	1072	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	0	3422	0	3243	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	6236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGATACTTGTAATCCG	NA	False	NA	-5	True	ATTAAA	-20	NA	13730770	13696975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ENSMUSG00000025937.7_13696976_13730770_2	chr1	-	938	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	0	3243	at_least_one_novel_splicesite	FALSE	canonical	3	146	junction_6	847.959003857039	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGATACTTGTAATCCG	NA	False	NA	-5	True	ATTAAA	-20	NA	13730770	13696975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730686
ENSMUSG00000025937.7_13696976_13730770_3	chr1	-	1064	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	0	3243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	878.890714986163	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGATACTTGTAATCCG	NA	False	NA	-5	True	ATTAAA	-20	NA	13730770	13696975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_13697129_13697579_13697662_13700288_13700426_13708450_13708634_13717608_13717736_13720944_13721109_13730552
ENSMUSG00000025939.20_16611014_16689513_1	chr1	-	1564	7	NIC	ENSMUSG00000025939.20	novel	1508	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	195.295289241702	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGAGTCTGTTCTTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	16689513	16611013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_16612014_16614172_16614257_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ENSMUSG00000025939.20_16640006_16689513_1	chr1	-	1981	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	200	0	-5	0	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGTTTCTATGACAATG	NA	False	NA	NA	False	TATAAA	-21	NA	16689513	16640005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ENSMUSG00000025939.20_16640357_16689513_1	chr1	-	1527	5	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-5	-351	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	178.300834266136	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGGACATTTTTATTT	NA	False	NA	NA	False	AATACA	-32	NA	16689513	16640356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_16641507_16652150_16652227_16655499_16655656_16672485_16672578_16689460
ENSMUSG00000025939.20_16640357_16689513_2	chr1	-	1551	6	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-5	-351	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	123.769139933992	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGGACATTTTTATTT	NA	False	NA	NA	False	AATACA	-32	NA	16689513	16640356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689460
ENSMUSG00000025939.20_16640357_16689513_3	chr1	-	1630	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	200	351	-5	-351	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGGACATTTTTATTT	NA	False	NA	NA	False	AATACA	-32	NA	16689513	16640356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ENSMUSG00000025939.20_16640781_16689513_1	chr1	-	1206	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	200	775	-5	-775	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCAGTCTCTGAAGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	16689513	16640780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ENSMUSG00000025939.20_16640781_16689513_2	chr1	-	1127	6	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-5	-775	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	123.769139933992	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCAGTCTCTGAAGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	16689513	16640780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689460
ENSMUSG00000025940.7_16735460_16748041_1	chr1	+	1226	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	26	458	0	-378	multi-exon	FALSE	canonical	3	512	junction_1	10.5	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAAAATGTGGATGGTC	NA	False	NA	6	True	AATAAA	-17	NA	16735459	16748041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_16735730_16737891_16737998_16747191
ENSMUSG00000025949.17_65225852_65231642_1	chr1	+	606	3	ISM	ENSMUSG00000025949.17	ENSMUST00000185317.7	1044	7	10	13223	0	0	5prime_fragment	FALSE	canonical	3	56	junction_1	23	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTCTTGATTGTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	65225851	65231642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_65225938_65229477_65229659_65231303
ENSMUSG00000025950.17_65197775_65218233_1	chr1	-	2190	9	NNC	ENSMUSG00000025950.17	novel	2302	9	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	297.080139650903	1867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTATTATGTGTTTTTA	NA	False	NA	-6	True	ATTAAA	-28	NA	65218233	65197774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207759_65210117_65210410_65214389_65214528_65218148
ENSMUSG00000025956.11_64646246_64656351_1	chr1	-	1366	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	50	614	-8	-607	multi-exon	FALSE	canonical	3	40	junction_3	6.34209919681348	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAACTTGTAGGTTAGAA	NA	False	NA	1	True	AATAAA	-25	NA	64656351	64646245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
ENSMUSG00000025956.11_64646530_64656351_1	chr1	-	1082	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	50	898	-8	585	multi-exon	FALSE	canonical	3	40	junction_3	6.34209919681348	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTACTGTTGGAGTCT	NA	False	NA	NA	False	NA	NA	NA	64656351	64646529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
ENSMUSG00000025958.15_64571991_64637092_1	chr1	+	1736	8	FSM	ENSMUSG00000025958.15	ENSMUST00000087366.11	8364	8	13	6615	0	238	multi-exon	FALSE	canonical	3	58	junction_3	12.7375389286621	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTAGTGTGGTGTTGGG	NA	False	NA	NA	False	ATTAAA	-18	NA	64571990	64637092	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ENSMUSG00000025958.15_64571991_64639541_1	chr1	+	4185	8	FSM	ENSMUSG00000025958.15	ENSMUST00000087366.11	8364	8	13	4166	0	-875	multi-exon	FALSE	canonical	3	58	junction_3	12.7375389286621	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTTCCCCCTGCTTTG	NA	False	NA	NA	False	NA	NA	NA	64571990	64639541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ENSMUSG00000025962.16_63769800_63791625_1	chr1	+	2270	12	FSM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	27	2189	0	1	multi-exon	FALSE	canonical	3	308	junction_4	54.5943720043143	896	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTGGATCAGCTGGCTGA	NA	False	NA	6	True	AATAAA	-17	NA	63769799	63791625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ENSMUSG00000025967.17_63216289_63218815_1	chr1	+	804	6	FSM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	305	830	0	0	multi-exon	FALSE	canonical	3	2982	junction_1	199.182730175083	89498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216288	63218815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ENSMUSG00000025968.17_63182755_63215849_1	chr1	-	2529	19	FSM	ENSMUSG00000025968.17	ENSMUST00000027111.15	2661	19	132	0	0	0	multi-exon	FALSE	canonical	3	367	junction_18	130.918608680223	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATATTAAAGTGTGAAGT	NA	False	NA	NA	False	AATAAA	-31	NA	63215849	63182754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
ENSMUSG00000025968.17_63182755_63215981_1	chr1	-	2579	20	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_19	239.419114661662	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATATTAAAGTGTGAAGT	NA	False	NA	NA	False	AATAAA	-31	NA	63215981	63182754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215586_63215684_63215923
ENSMUSG00000025968.17_63182755_63215981_2	chr1	-	2819	19	FSM	ENSMUSG00000025968.17	ENSMUST00000168099.9	2590	19	-90	-139	0	0	multi-exon	FALSE	canonical	3	212	junction_18	163.056757519704	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATATTAAAGTGTGAAGT	NA	False	NA	NA	False	AATAAA	-31	NA	63215981	63182754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215586
ENSMUSG00000025971.7_57427399_57445630_1	chr1	+	1195	8	NIC	ENSMUSG00000025971.7	novel	3540	5	NA	NA	-18088	-5161	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCCTGGGAATTTGGAC	NA	False	NA	NA	False	NA	NA	NA	57427398	57445630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440546_57440683_57445542
ENSMUSG00000025971.7_57427399_57445630_2	chr1	+	1220	9	NIC	ENSMUSG00000025971.7	novel	3540	5	NA	NA	-18088	-5161	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCCTGGGAATTTGGAC	NA	False	NA	NA	False	NA	NA	NA	57427398	57445630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57432828_57432854_57433205_57433251_57435885_57435956_57440546_57440683_57445542
ENSMUSG00000025971.7_57445918_57455064_1	chr1	+	1061	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	431	2048	0	-2048	multi-exon	FALSE	canonical	3	301	junction_4	18.5926732881531	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCTAGTGTTCTTTAAA	NA	False	NA	10	True	AATAAA	-13	NA	57445917	57455064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
ENSMUSG00000025978.15_55210907_55237845_1	chr1	-	748	5	NNC	ENSMUSG00000025978.15	novel	1870	8	NA	NA	7803	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	3.56195171219375	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCTACTACTATCTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	55237845	55210906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_55211242_55224108_55224188_55233402_55233507_55234674_55234797_55237737
ENSMUSG00000025979.14_55170446_55192235_1	chr1	+	898	7	FSM	ENSMUSG00000025979.14	ENSMUST00000159311.8	1816	7	56	862	0	77	multi-exon	FALSE	canonical	3	33	junction_1	175.833886255055	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCTAAACAATCATTGG	NA	False	NA	13	True	AATAAA	-21	NA	55170445	55192235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_55170519_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ENSMUSG00000025979.14_55170446_55192235_2	chr1	+	961	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	56	1823	0	77	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCTAAACAATCATTGG	NA	False	NA	13	True	AATAAA	-21	NA	55170445	55192235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ENSMUSG00000025979.14_55170446_55192518_1	chr1	+	1244	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	56	1540	0	0	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	1290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTCCTACATAAAGTG	NA	False	NA	NA	False	NA	NA	NA	55170445	55192518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ENSMUSG00000025980.15_55116994_55127000_1	chr1	-	2240	12	FSM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	183	0	183	0	multi-exon	FALSE	canonical	2	4506	junction_7	645.86437693097	16866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4638	False	NA	-6	True	AATAAA	-16	NA	55127000	55116993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ENSMUSG00000025980.15_55116994_55127183_1	chr1	-	2213	12	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	335	junction_11	1793.34097000842	15205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4455	False	NA	-6	True	AATAAA	-16	NA	55127183	55116993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127147
ENSMUSG00000025980.15_55117207_55127000_1	chr1	-	2027	12	FSM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	183	213	183	-213	multi-exon	FALSE	canonical	2	4506	junction_7	645.86437693097	3820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGTGCAAGAGCCATA	4638	False	NA	-17	True	AATAAA	-20	NA	55127000	55117206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ENSMUSG00000025982.14_55026182_55027123_1	chr1	-	496	2	ISM	ENSMUSG00000025982.14	ENSMUST00000190175.2	3350	3	3151	1850	3151	-1850	3prime_fragment	FALSE	canonical	3	1607	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGTTTTTTGAAT	355	False	NA	0	True	AATAAA	-22	NA	55027123	55026181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_55026652_55027097
ENSMUSG00000025982.14_55026182_55066554_1	chr1	-	4255	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	86	1854	-1	-1850	multi-exon	FALSE	canonical	2	1032	junction_2	157.733865172392	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGTTTTTTGAAT	NA	False	NA	0	True	AATAAA	-22	NA	55066554	55026181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ENSMUSG00000025982.14_55053929_55066554_1	chr1	-	599	5	ISM	ENSMUSG00000025982.14	ENSMUST00000191303.2	600	7	-1	2518	-1	1031	5prime_fragment	FALSE	canonical	3	24	junction_1	646.597778762037	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTAGATATGTTTGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	55066554	55053928	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_55054084_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ENSMUSG00000025986.7_46846704_46892680_1	chr1	-	4972	10	FSM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	526	0	526	0	multi-exon	TRUE	canonical	3	237	junction_4	21.0736509753792	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	454	False	NA	NA	False	AATAAA	-16	NA	46892680	46846703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
ENSMUSG00000025986.7_46874405_46892680_1	chr1	-	957	2	ISM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	526	27701	526	395	5prime_fragment	FALSE	canonical	3	284	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAATGAAGGTGAACTTC	454	False	NA	NA	False	NA	NA	NA	46892680	46874404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_46875312_46892630
ENSMUSG00000025995.17_45834667_45862673_1	chr1	+	2506	21	FSM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	341	106	0	0	multi-exon	FALSE	canonical	3	530	junction_5	51.2145243070752	1414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGGCCATGGCTGTGCCA	NA	False	NA	-98	True	NA	NA	NA	45834666	45862673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ENSMUSG00000025995.17_45834667_45862779_1	chr1	+	2607	21	NNC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	138.937971771579	1603	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAGCCTTGTGTTTAT	NA	False	NA	8	True	TATAAA	-24	NA	45834666	45862779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857986_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ENSMUSG00000025995.17_45834667_45862779_2	chr1	+	2612	21	FSM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	341	0	0	0	multi-exon	FALSE	canonical	3	530	junction_5	51.2145243070752	1610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAGCCTTGTGTTTAT	NA	False	NA	8	True	TATAAA	-24	NA	45834666	45862779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ENSMUSG00000026000.17_67042534_67078001_1	chr1	-	1568	9	NNC	ENSMUSG00000026000.17	novel	1385	10	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_4	175.92096947209	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGAGTTTTTATTTCC	NA	False	NA	-5	True	AATGAA	-16	NA	67078001	67042533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046205_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653
ENSMUSG00000026000.17_67042534_67078001_2	chr1	-	1573	9	FSM	ENSMUSG00000026000.17	ENSMUST00000113979.10	4461	9	30	2858	-8	0	multi-exon	FALSE	canonical	3	327	junction_5	113.959902487673	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGAGTTTTTATTTCC	NA	False	NA	-5	True	AATGAA	-16	NA	67078001	67042533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653
ENSMUSG00000026000.17_67042534_67078001_3	chr1	-	1358	10	NNC	ENSMUSG00000026000.17	novel	1385	10	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	186.772258494697	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGAGTTTTTATTTCC	NA	False	NA	-5	True	AATGAA	-16	NA	67078001	67042533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046205_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077960
ENSMUSG00000026005.16_66739990_66758976_1	chr1	+	828	7	NNC	ENSMUSG00000026005.16	novel	2724	7	NA	NA	0	12	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_6	298.472034796487	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGATCTAGGATGCCTG	NA	False	NA	17	True	ATTAAA	-24	NA	66739989	66758976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912_66757064_66758939
ENSMUSG00000026005.16_66740066_66757578_1	chr1	+	1230	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	76	1386	0	400	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAAGCCTAGGGTTTC	NA	False	NA	5	True	ATTAAA	-16	NA	66740065	66757578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ENSMUSG00000026005.16_66740066_66757836_1	chr1	+	1488	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	76	1128	0	658	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTTATGTATATCGAATGA	NA	False	NA	NA	False	AATAAA	-26	NA	66740065	66757836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ENSMUSG00000026005.16_66740066_66758669_1	chr1	+	2310	6	NIC	ENSMUSG00000026005.16	novel	2713	7	NA	NA	0	-295	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	305.506530208439	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAGTTTGTAAGTATTG	NA	False	NA	15	True	NA	NA	NA	66740065	66758669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_66740177_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ENSMUSG00000026005.16_66740066_66758669_2	chr1	+	2321	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	76	295	0	-295	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAGTTTGTAAGTATTG	NA	False	NA	15	True	NA	NA	NA	66740065	66758669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ENSMUSG00000026019.16_60116852_60137334_1	chr1	-	1956	14	FSM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	470	825	-29	-825	multi-exon	FALSE	canonical	3	160	junction_13	218.809771208535	1747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCTACATTTTACCCT	NA	False	NA	-32	True	TATAAA	-24	NA	60137334	60116851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
ENSMUSG00000026019.16_60117302_60137067_1	chr1	-	1654	13	FSM	ENSMUSG00000026019.16	ENSMUST00000027173.15	10012	13	0	8358	0	-1275	multi-exon	FALSE	canonical	3	863	junction_12	56.5618515923547	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGTTGGGTCTTGTC	NA	False	NA	-22	True	AATGAA	-15	NA	60137067	60117301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
ENSMUSG00000026019.16_60117302_60137334_1	chr1	-	1506	14	FSM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	470	1275	-29	-1275	multi-exon	FALSE	canonical	3	160	junction_13	218.809771208535	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGTTGGGTCTTGTC	NA	False	NA	-22	True	AATGAA	-15	NA	60137334	60117301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
ENSMUSG00000026019.16_60117302_60137334_2	chr1	-	1659	14	NIC	ENSMUSG00000026019.16	novel	2850	14	NA	NA	-29	-1275	combination_of_known_junctions	FALSE	canonical	3	21	junction_13	254.854593651606	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGTTGGGTCTTGTC	NA	False	NA	-22	True	AATGAA	-15	NA	60137334	60117301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137148
ENSMUSG00000026019.16_60117302_60137334_3	chr1	-	1604	14	FSM	ENSMUSG00000026019.16	ENSMUST00000122038.8	2850	14	-29	1275	-29	-1275	multi-exon	FALSE	canonical	3	10	junction_13	257.719103084491	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGTTGGGTCTTGTC	NA	False	NA	-22	True	AATGAA	-15	NA	60137334	60117301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137203
ENSMUSG00000026020.10_59724144_59750669_1	chr1	+	1997	15	FSM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	-24	7534	0	0	multi-exon	FALSE	canonical	3	1434	junction_3	210.570471503931	5697	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTTGTGATCTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	59724143	59750669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ENSMUSG00000026021.16_59678698_59709962_1	chr1	-	1079	5	FSM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	31	105	-11	-105	multi-exon	FALSE	canonical	3	3231	junction_1	432.6531520745	6022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTTTTGATTCTGTTT	620	False	NA	-6	True	AATAAA	-30	NA	59709962	59678697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59709838
ENSMUSG00000026032.9_58625761_58635123_1	chr1	+	545	3	FSM	ENSMUSG00000026032.9	ENSMUST00000027193.9	763	3	218	0	218	0	multi-exon	FALSE	canonical	3	979	junction_1	90.5	5895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCCCTCTAACCTCA	NA	False	NA	52	True	AATAAA	-20	NA	58625760	58635123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_58625830_58630248_58630409_58634807
ENSMUSG00000026035.16_58470156_58484335_1	chr1	-	772	7	FSM	ENSMUSG00000026035.16	ENSMUST00000114348.8	1033	7	258	3	0	0	multi-exon	FALSE	canonical	3	104	junction_6	35.853482707015	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGAGTGTCCTTTTTT	NA	False	NA	-2	True	AATAGA	-25	NA	58484335	58470155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484304
ENSMUSG00000026035.16_58470156_58484645_1	chr1	-	818	7	NIC	ENSMUSG00000026035.16	novel	896	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	60.3869467131212	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGAGTGTCCTTTTTT	NA	False	NA	-2	True	AATAGA	-25	NA	58484645	58470155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484568
ENSMUSG00000026035.16_58470156_58484645_2	chr1	-	861	7	NNC	ENSMUSG00000026035.16	novel	896	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_6	66.6149799636355	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGAGTGTCCTTTTTT	NA	False	NA	-2	True	AATAGA	-25	NA	58484645	58470155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484525
ENSMUSG00000026035.16_58470156_58484645_3	chr1	-	789	7	NNC	ENSMUSG00000026035.16	novel	896	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	72.861550598073	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGAGTGTCCTTTTTT	NA	False	NA	-2	True	AATAGA	-25	NA	58484645	58470155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484597
ENSMUSG00000026035.16_58470156_58484645_4	chr1	-	1014	6	NIC	ENSMUSG00000026035.16	novel	896	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	75.6370279691105	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGAGTGTCCTTTTTT	NA	False	NA	-2	True	AATAGA	-25	NA	58484645	58470155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_58470490_58473489_58473609_58480001_58480096_58481683_58481759_58483747_58483799_58484304
ENSMUSG00000026036.18_58470156_58484590_1	chr1	+	1362	7	NIC	ENSMUSG00000026036.18	novel	3769	7	NA	NA	-14154	-2619	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCACAGGACCAATTCCG	NA	False	NA	NA	False	NA	NA	NA	58470155	58484590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58483969
ENSMUSG00000026036.18_58470156_58484645_1	chr1	+	856	7	NIC	ENSMUSG00000026036.18	novel	3769	7	NA	NA	-14154	-2564	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCACAGGACAACTTCCG	NA	False	NA	NA	False	NA	NA	NA	58470155	58484645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484530
ENSMUSG00000026036.18_58470156_58484645_2	chr1	+	750	6	NIC	ENSMUSG00000026036.18	novel	3769	7	NA	NA	-14154	-2564	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCACAGGACAACTTCCG	NA	False	NA	NA	False	NA	NA	NA	58470155	58484645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_58470490_58473489_58473609_58480001_58480096_58481683_58481759_58483747_58483799_58484568
ENSMUSG00000026036.18_58470156_58484698_1	chr1	+	816	7	NNC	ENSMUSG00000026036.18	novel	3769	7	NA	NA	-14154	-2511	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACGCACAGGACCACTTC	NA	False	NA	NA	False	NA	NA	NA	58470155	58484698	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484623
ENSMUSG00000026036.18_58470156_58484698_2	chr1	+	787	7	NNC	ENSMUSG00000026036.18	novel	3769	7	NA	NA	-14154	-2511	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACGCACAGGACCACTTC	NA	False	NA	NA	False	NA	NA	NA	58470155	58484698	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484652
ENSMUSG00000026036.18_58470561_58484645_1	chr1	+	518	7	NNC	ENSMUSG00000026036.18	novel	3769	7	NA	NA	-13749	-2564	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCACAGGACAACTTCCG	NA	False	NA	NA	False	NA	NA	NA	58470560	58484645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_58470591_58473485_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484568
ENSMUSG00000026036.18_58484426_58500684_1	chr1	+	1722	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	116	1931	0	141	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTGTTTCTTGGT	NA	False	NA	17	True	ATTAAA	-17	NA	58484425	58500684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ENSMUSG00000026036.18_58484787_58500684_1	chr1	+	1361	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	477	1931	0	141	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTGTTTCTTGGT	NA	False	NA	17	True	ATTAAA	-17	NA	58484786	58500684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ENSMUSG00000026036.18_58502352_58544086_1	chr1	+	2957	18	NIC	ENSMUSG00000026036.18	novel	3769	7	NA	NA	5508	23111	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCAAGGGAGCTGCGCGC	NA	False	NA	NA	False	NA	NA	NA	58502351	58544086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ENSMUSG00000026036.18_58503138_58544086_1	chr1	+	2171	18	Genic_Genomic	ENSMUSG00000026036.18	novel	2168	7	NA	NA	6294	23111	multi-exon	FALSE	non_canonical	0	0	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCAAGGGAGCTGCGCGC	NA	False	NA	NA	False	NA	NA	NA	58503137	58544086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ENSMUSG00000026036.18_58503138_58544144_1	chr1	+	2212	17	Genic_Genomic	ENSMUSG00000026036.18	novel	2168	7	NA	NA	6294	23169	multi-exon	FALSE	non_canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACCAATGGGGAGCCG	NA	False	NA	NA	False	NA	NA	NA	58503137	58544144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532804_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ENSMUSG00000026037.15_58502352_58544086_2	chr1	-	2951	18	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-2	-422	combination_of_known_junctions	FALSE	canonical	3	142	junction_17	104.64575272802	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGTCTGCACTTTGC	NA	False	NA	3	True	AATAAA	-21	NA	58544086	58502351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
ENSMUSG00000026037.15_58502352_58544144_1	chr1	-	3015	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	124	422	-30	-422	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGTCTGCACTTTGC	NA	False	NA	3	True	AATAAA	-21	NA	58544144	58502351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ENSMUSG00000026037.15_58502631_58544086_1	chr1	-	2678	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	182	701	-2	-701	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGACATTTTCTATTTTC	NA	False	NA	-5	True	AATAAA	-21	NA	58544086	58502630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ENSMUSG00000026037.15_58502631_58544144_1	chr1	-	2730	18	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-30	-701	combination_of_known_junctions	FALSE	canonical	3	142	junction_17	104.64575272802	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGACATTTTCTATTTTC	NA	False	NA	-5	True	AATAAA	-21	NA	58544144	58502630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
ENSMUSG00000026037.15_58503138_58544086_2	chr1	-	2165	18	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-2	225	combination_of_known_junctions	FALSE	canonical	3	142	junction_17	104.64575272802	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTCTGGAGACTTCT	NA	False	NA	-14	True	GATAAA	-16	NA	58544086	58503137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
ENSMUSG00000026039.10_58035130_58055871_1	chr1	+	2398	7	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	0	9187	0	-9186	5prime_fragment	FALSE	canonical	3	186	junction_3	14.4539498638492	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAGCAAAATCCCTAGGC	5139	False	NA	NA	False	NA	NA	NA	58035129	58055871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517
ENSMUSG00000026049.12_44125776_44141551_1	chr1	-	1155	6	FSM	ENSMUSG00000026049.12	ENSMUST00000150911.8	960	6	50	-245	0	0	multi-exon	FALSE	canonical	3	213	junction_5	82.045353311446	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGTGCCTTTGTTTTAC	NA	False	NA	-3	True	ATTAAA	-17	NA	44141551	44125775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141487
ENSMUSG00000026049.12_44125776_44141551_2	chr1	-	1213	7	NIC	ENSMUSG00000026049.12	novel	1272	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_6	127.50348579113	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGTGCCTTTGTTTTAC	NA	False	NA	-3	True	ATTAAA	-17	NA	44141551	44125775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059_44141118_44141487
ENSMUSG00000026049.12_44125776_44141599_1	chr1	-	972	5	NIC	ENSMUSG00000026049.12	novel	1122	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	165.394981786026	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGTGCCTTTGTTTTAC	NA	False	NA	-3	True	ATTAAA	-17	NA	44141599	44125775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44139007_44139162_44141487
ENSMUSG00000026049.12_44126020_44141599_1	chr1	-	1017	7	NIC	ENSMUSG00000026049.12	novel	935	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_6	127.50348579113	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGTTGGTTAATTTGAT	NA	False	NA	NA	False	AATAAA	-2	NA	44141599	44126019	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059_44141118_44141487
ENSMUSG00000026078.11_39026922_39035526_1	chr1	+	888	6	FSM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	2233	793	0	-201	multi-exon	FALSE	canonical	3	825	junction_1	70.5532423067856	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGGAACTCTTTAATT	NA	False	NA	NA	False	AAGAAA	-1	NA	39026921	39035526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
ENSMUSG00000026078.11_39026922_39035727_1	chr1	+	1089	6	FSM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	2233	592	0	0	multi-exon	FALSE	canonical	3	825	junction_1	70.5532423067856	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAGTGCAAAAAATGAGA	NA	False	NA	NA	False	AATAAA	-26	NA	39026921	39035727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
ENSMUSG00000026078.11_39026922_39035727_2	chr1	+	1080	6	NNC	ENSMUSG00000026078.11	novel	3914	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	384.621580257791	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAGTGCAAAAAATGAGA	NA	False	NA	NA	False	AATAAA	-26	NA	39026921	39035727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_39026935_39030339_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
ENSMUSG00000026078.11_39026922_39036320_1	chr1	+	1682	6	FSM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	2233	-1	0	1	multi-exon	FALSE	canonical	3	825	junction_1	70.5532423067856	1858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTGTAAGATTTATTT	NA	False	NA	4	True	AATACA	-14	NA	39026921	39036320	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
ENSMUSG00000026083.13_38037210_38091102_1	chr1	+	4120	24	FSM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	119	3558	0	0	multi-exon	FALSE	canonical	3	450	junction_9	76.9774965275217	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTTCTACAGATTTTG	1408	False	NA	37	True	ATTAAA	-24	NA	38037209	38091102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026083.13_38091877_38094479_1	chr1	+	1104	6	NIC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	8162	-181	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAACTGCAGCCATTTA	NA	False	NA	NA	False	AATAAA	-27	NA	38091876	38094479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371
ENSMUSG00000026087.12_37929624_37937419_1	chr1	+	706	6	FSM	ENSMUSG00000026087.12	ENSMUST00000027256.12	969	6	66	197	0	0	multi-exon	FALSE	canonical	3	545	junction_1	191.904559612324	7652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	False	NA	20	True	ATTAAA	-20	NA	37929623	37937419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_37929666_37932023_37932105_37933019_37933097_37934410_37934492_37936768_37936916_37937141
ENSMUSG00000026088.16_37917969_37929357_1	chr1	-	1096	7	FSM	ENSMUSG00000026088.16	ENSMUST00000027257.10	1231	7	135	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	18.2543754267908	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGATCCACTCACCTG	NA	False	NA	0	True	AATAAA	-19	NA	37929357	37917968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_37918445_37918640_37918702_37920013_37920130_37920779_37920867_37921642_37921780_37924295_37924398_37929240
ENSMUSG00000026088.16_37917969_37929357_2	chr1	-	1060	7	NNC	ENSMUSG00000026088.16	novel	1231	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	74.5087616026166	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGATCCACTCACCTG	NA	False	NA	0	True	AATAAA	-19	NA	37929357	37917968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_37918445_37918640_37918702_37920013_37920130_37920815_37920867_37921642_37921780_37924295_37924398_37929240
ENSMUSG00000026088.16_37917969_37929492_1	chr1	-	1195	7	NNC	ENSMUSG00000026088.16	novel	1231	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	74.5087616026166	1105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGATCCACTCACCTG	NA	False	NA	0	True	AATAAA	-19	NA	37929492	37917968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_37918445_37918640_37918702_37920013_37920130_37920815_37920867_37921642_37921780_37924295_37924398_37929240
ENSMUSG00000026095.16_53383804_53391729_1	chr1	-	801	6	FSM	ENSMUSG00000026095.16	ENSMUST00000123519.9	983	6	182	0	0	0	multi-exon	TRUE	canonical	3	13	junction_2	221.433872747599	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGGGTGTAGTAGTT	NA	False	NA	-30	True	AATAAA	-13	NA	53391729	53383803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_53384139_53385738_53385921_53387604_53387718_53389145_53389222_53390038_53390093_53391688
ENSMUSG00000026095.16_53383804_53391729_2	chr1	-	2232	6	FSM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	182	28	0	0	multi-exon	FALSE	canonical	3	502	junction_1	45.94344349306	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGGGTGTAGTAGTT	NA	False	NA	-30	True	AATAAA	-13	NA	53391729	53383803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_53384139_53385738_53385921_53386173_53387718_53389145_53389222_53390038_53390093_53391688
ENSMUSG00000026095.16_53383804_53391862_1	chr1	-	2360	6	NNC	ENSMUSG00000026095.16	novel	2442	6	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	219.860865094268	1248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGGGTGTAGTAGTT	NA	False	NA	-30	True	AATAAA	-13	NA	53391862	53383803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_53384139_53385738_53385921_53386173_53387718_53389145_53389222_53390038_53390093_53391693
ENSMUSG00000026096.15_53352813_53356513_1	chr1	+	2704	2	FSM	ENSMUSG00000026096.15	ENSMUST00000153939.2	4005	2	-3	1304	0	722	multi-exon	FALSE	canonical	3	159	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAACTCTGAGCACTAAAT	NA	False	NA	NA	False	NA	NA	NA	53352812	53356513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_53353018_53354014
ENSMUSG00000026096.15_53352813_53365326_1	chr1	+	1662	8	FSM	ENSMUSG00000026096.15	ENSMUST00000027265.10	1868	8	30	176	0	0	multi-exon	FALSE	canonical	3	122	junction_2	14.7537611946159	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCATTTCGTGTTTCA	NA	False	NA	11	True	AATAAA	-31	NA	53352812	53365326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ENSMUSG00000026096.15_53352813_53365326_2	chr1	+	1657	8	NIC	ENSMUSG00000026096.15	novel	1723	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	46.6559268496949	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCATTTCGTGTTTCA	NA	False	NA	11	True	AATAAA	-31	NA	53352812	53365326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_53353018_53354014_53354259_53357065_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ENSMUSG00000026096.15_53352813_53365326_3	chr1	+	1274	7	NIC	ENSMUSG00000026096.15	novel	1723	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	47.461387815079	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCATTTCGTGTTTCA	NA	False	NA	11	True	AATAAA	-31	NA	53352812	53365326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_53353018_53354014_53354259_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ENSMUSG00000026102.10_52828577_52856728_1	chr1	-	1657	6	FSM	ENSMUSG00000026102.10	ENSMUST00000027271.9	5767	6	119	3991	-1	250	multi-exon	FALSE	canonical	2	5	junction_1	1.49666295470958	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTACAGTTCAAGTGGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	52856728	52828576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_52829377_52830846_52831022_52833628_52833830_52836199_52836261_52838443_52838696_52856560
ENSMUSG00000026111.16_37469267_37478068_1	chr1	+	2253	5	ISM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	47	-3	0	0	intron_retention	FALSE	canonical	3	315	junction_1	77.3413699128739	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	37469266	37478068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457
ENSMUSG00000026112.8_37457474_37469108_1	chr1	-	2478	3	FSM	ENSMUSG00000026112.8	ENSMUST00000027286.7	3863	3	76	1309	-27	-1309	multi-exon	FALSE	canonical	3	395	junction_2	27.5	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGCTTATAAATTTTAC	6348	False	NA	NA	False	AAGAAA	-21	NA	37469108	37457473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_37459709_37467422_37467507_37468949
ENSMUSG00000026112.8_37459405_37469108_1	chr1	-	547	3	FSM	ENSMUSG00000026112.8	ENSMUST00000027286.7	3863	3	76	3240	-27	-3240	multi-exon	FALSE	canonical	3	395	junction_2	27.5	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGACTCTTCGATCAGAT	6348	False	NA	-7	True	AATGAA	-15	NA	37469108	37459404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_37459709_37467422_37467507_37468949
ENSMUSG00000026117.11_36810410_36821899_1	chr1	+	1948	12	NNC	ENSMUSG00000026117.11	novel	1338	6	NA	NA	337	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.0288908414713	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTCTCATCTTCCCT	NA	False	NA	4	True	AATAAA	-17	NA	36810409	36821899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_36810669_36810869_36811031_36817233_36817373_36817460_36817546_36817627_36817672_36817831_36817884_36818197_36818394_36818765_36818973_36819917_36820111_36820199_36820341_36820426_36820540_36821541
ENSMUSG00000026123.12_34889057_34908709_1	chr1	+	848	7	FSM	ENSMUSG00000026123.12	ENSMUST00000156687.8	5176	7	0	4328	0	-4328	multi-exon	FALSE	canonical	3	235	junction_4	21.2733531808118	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTTGTGTGCACTTGT	NA	False	NA	NA	False	TTTAAA	-17	NA	34889056	34908709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380
ENSMUSG00000026123.12_34889057_34916245_1	chr1	+	879	8	FSM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	-16	2416	0	-2413	multi-exon	FALSE	canonical	3	235	junction_4	21.365621823817	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGTAATCTAATAATTGT	NA	False	NA	NA	False	TTTAAA	-14	NA	34889056	34916245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ENSMUSG00000026123.12_34889057_34917340_1	chr1	+	1974	8	FSM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	-16	1321	0	-1318	multi-exon	FALSE	canonical	3	235	junction_4	21.365621823817	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGTGACTGGCATATT	NA	False	NA	NA	False	TTTAAA	-37	NA	34889056	34917340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ENSMUSG00000026124.5_34576164_34583394_1	chr1	+	563	3	ISM	ENSMUSG00000026124.5	ENSMUST00000027298.5	1040	6	1435	0	1435	0	3prime_fragment	FALSE	canonical	3	21	junction_1	0.5	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCCTTGCTTGGCTGGG	NA	False	NA	NA	False	AATAAA	-16	NA	34576163	34583394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_34576328_34576406_34576517_34583105
ENSMUSG00000026127.14_34478592_34484040_1	chr1	+	1779	9	FSM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	-340	4397	-340	445	multi-exon	FALSE	canonical	3	439	junction_1	56.5552826887109	2247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCGTCTATTCCCTGCC	5273	False	NA	15	True	NA	NA	NA	34478591	34484040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
ENSMUSG00000026127.14_34478932_34484040_1	chr1	+	1439	9	FSM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	0	4397	0	445	multi-exon	FALSE	canonical	3	439	junction_1	56.5552826887109	2181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCGTCTATTCCCTGCC	5613	False	NA	15	True	NA	NA	NA	34478931	34484040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
ENSMUSG00000026127.14_34478932_34484040_2	chr1	+	1289	9	NNC	ENSMUSG00000026127.14	novel	5836	9	NA	NA	0	445	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	182.150650218439	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCGTCTATTCCCTGCC	5613	False	NA	15	True	NA	NA	NA	34478931	34484040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483311_34483548
ENSMUSG00000026127.14_34478932_34488437_1	chr1	+	1488	10	NNC	ENSMUSG00000026127.14	novel	5836	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	221.497930765354	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCTGAGGTTGGGTTAA	5613	False	NA	52	True	AATAAA	-15	NA	34478931	34488437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34487706_34487954_34488033
ENSMUSG00000026134.12_33492891_33677091_1	chr1	-	1379	10	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	-14686	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_9	88.3062851670253	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGCAAGTGGGAGTC	2980	False	NA	-2	True	AATAAA	-18	NA	33677091	33492890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33677047
ENSMUSG00000026142.16_82294363_82420740_1	chr1	+	1099	7	FSM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	190	2347	0	-2347	multi-exon	FALSE	canonical	3	170	junction_1	15.8893745069534	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAATTGGTTTTAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	82294362	82420740	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ENSMUSG00000026142.16_82294363_82423087_1	chr1	+	3446	7	FSM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	190	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	15.8893745069534	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTGCTCGAGTCA	NA	False	NA	14	True	AATAAA	-20	NA	82294362	82423087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ENSMUSG00000026150.15_82702639_82729502_2	chr1	+	1038	7	NIC	ENSMUSG00000026150.15	novel	1715	8	NA	NA	0	53	combination_of_known_junctions	FALSE	canonical	3	326	junction_5	73.6809940818451	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTGTCTTTGCATCA	NA	False	NA	17	True	TATAAA	-17	NA	82702638	82729502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82728240_82728326_82729305
ENSMUSG00000026150.15_82702639_82730111_1	chr1	+	1647	7	NIC	ENSMUSG00000026150.15	novel	1715	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	326	junction_5	73.6809940818451	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	13	True	AATAAA	-13	NA	82702638	82730111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82728240_82728326_82729305
ENSMUSG00000026154.5_24035020_24044711_1	chr1	-	667	3	NNC	ENSMUSG00000026154.5	novel	683	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	156	1678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTATTTTATTTTTA	NA	False	NA	-1	True	AATAAA	-23	NA	24044711	24035019	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_24035442_24042227_24042388_24044626
ENSMUSG00000026155.14_23884706_23887495_1	chr1	-	1090	2	ISM	ENSMUSG00000026155.14	ENSMUST00000129254.8	1365	10	61275	-671	-637	0	3prime_fragment	FALSE	canonical	3	386	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTATTTGTGGGTTTT	4422	False	NA	-2	True	ATTAAA	-17	NA	23887495	23884705	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_23885645_23887344
ENSMUSG00000026162.9_75006515_75101878_1	chr1	-	1403	8	FSM	ENSMUSG00000026162.9	ENSMUST00000152855.3	1586	8	-34	217	-34	-217	multi-exon	FALSE	canonical	3	10	junction_7	8.89622712968015	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGACTGTTGAGGTTACCT	NA	False	NA	-10	True	AATAAA	-15	NA	75101878	75006514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_75006928_75007327_75007435_75007953_75008072_75084467_75084527_75085659_75085799_75094701_75094915_75097219_75097475_75101779
ENSMUSG00000026162.9_75006515_75101878_2	chr1	-	1325	8	NNC	ENSMUSG00000026162.9	novel	1586	8	NA	NA	-34	-217	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	8.89622712968015	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGACTGTTGAGGTTACCT	NA	False	NA	-10	True	AATAAA	-15	NA	75101878	75006514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_75006928_75007327_75007435_75007953_75008072_75084467_75084527_75085659_75085799_75094701_75094915_75097219_75097397_75101779
ENSMUSG00000026171.13_74632907_74640533_1	chr1	-	1548	9	NIC	ENSMUSG00000026171.13	novel	1479	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	22	junction_3	29.3233588628588	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGTGGTATGACTCTT	NA	False	NA	NA	False	AATAAA	-30	NA	74640533	74632906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_74633562_74633718_74633854_74634367_74634458_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637952_74638224_74638300_74640483
ENSMUSG00000026172.13_74627533_74631283_1	chr1	+	1497	8	FSM	ENSMUSG00000026172.13	ENSMUST00000027358.11	1890	8	74	319	0	0	multi-exon	FALSE	canonical	3	21	junction_1	42.4562199476696	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTTGTGCCTTTCCTC	1216	False	NA	4	True	CATAAA	-16	NA	74627532	74631283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_74627647_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ENSMUSG00000026174.10_74545219_74570001_1	chr1	+	3019	8	NIC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	351.989331934816	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTGTTTTTAAAT	862	False	NA	38	True	AATAAA	-23	NA	74545218	74570001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_74545374_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ENSMUSG00000026174.10_74545494_74568616_1	chr1	+	1606	8	FSM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	277	1385	275	1280	multi-exon	FALSE	canonical	3	963	junction_5	46.4318680148337	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTCTGACAGACCGATA	1137	False	NA	19	True	AATAAA	-21	NA	74545493	74568616	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ENSMUSG00000026174.10_74545494_74570001_1	chr1	+	2991	8	FSM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	277	0	275	0	multi-exon	FALSE	canonical	3	963	junction_5	46.4318680148337	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTGTTTTTAAAT	1137	False	NA	38	True	AATAAA	-23	NA	74545493	74570001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ENSMUSG00000026177.12_74422759_74425221_1	chr1	+	1039	4	NIC	ENSMUSG00000026177.12	novel	2315	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	20.8859335970941	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGAGTTCTAGGTTA	4321	False	NA	NA	False	NA	NA	NA	74422758	74425221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_74422904_74423182_74423333_74423855_74423930_74424551
ENSMUSG00000026177.12_74422759_74425221_2	chr1	+	1193	5	ISM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	8397	0	0	0	3prime_fragment	FALSE	canonical	3	29	junction_1	7.87400787401181	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGAGTTCTAGGTTA	4321	False	NA	NA	False	NA	NA	NA	74422758	74425221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
ENSMUSG00000026179.15_74324213_74326613_1	chr1	+	616	3	FSM	ENSMUSG00000026179.15	ENSMUST00000113805.8	740	3	124	0	0	0	multi-exon	FALSE	canonical	3	1381	junction_1	89	4712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCCAGGTTGAATTTGT	NA	False	NA	6	True	AATAAA	-24	NA	74324212	74326613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_74324297_74325000_74325170_74326250
ENSMUSG00000026181.14_16714438_16742723_1	chr16	+	2312	8	FSM	ENSMUSG00000026181.14	ENSMUST00000027373.12	4922	8	105	2505	0	-2505	multi-exon	FALSE	canonical	3	74	junction_7	6.62093155786084	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGATGGAAACAAACTTTTC	NA	False	NA	NA	False	NA	NA	NA	16714437	16742723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_16714489_16721187_16721456_16728802_16728946_16731897_16732101_16733023_16733213_16735523_16735668_16740326_16740421_16741503
ENSMUSG00000026181.14_16714438_16745228_1	chr16	+	4817	8	FSM	ENSMUSG00000026181.14	ENSMUST00000027373.12	4922	8	105	0	0	0	multi-exon	FALSE	canonical	3	74	junction_7	6.62093155786084	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTGCCACTTGGATCT	NA	False	NA	35	True	AATAAA	-17	NA	16714437	16745228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_16714489_16721187_16721456_16728802_16728946_16731897_16732101_16733023_16733213_16735523_16735668_16740326_16740421_16741503
ENSMUSG00000026187.10_72346692_72434112_1	chr1	+	2444	21	FSM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	106	-1	106	1	multi-exon	FALSE	canonical	3	464	junction_5	74.8852455427636	2024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGAAGTCTCAT	428	False	NA	23	True	TATAAA	-29	NA	72346691	72434112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ENSMUSG00000026189.14_72298331_72323418_1	chr1	-	883	6	NIC	ENSMUSG00000026189.14	novel	1120	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	98.9432160382914	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTATCTTTTAAGGATT	NA	False	NA	-6	True	AATAAA	-19	NA	72323418	72298330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72316445_72316580_72323251
ENSMUSG00000026192.14_71596338_71618563_1	chr1	+	2589	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	29	227	0	-227	multi-exon	FALSE	canonical	3	576	junction_4	38.3577313661217	1516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTGTGGTTACTTTTG	NA	False	NA	14	True	AATAAA	-14	NA	71596337	71618563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
ENSMUSG00000026192.14_71596338_71618563_2	chr1	+	2584	16	NNC	ENSMUSG00000026192.14	novel	2845	16	NA	NA	0	-227	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	162.96210875197	1512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTGTGGTTACTTTTG	NA	False	NA	14	True	AATAAA	-14	NA	71596337	71618563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600110_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
ENSMUSG00000026193.16_71624682_71642992_1	chr1	-	2866	14	ISM	ENSMUSG00000026193.16	ENSMUST00000188894.7	8043	45	49339	3	-989	0	3prime_fragment	FALSE	canonical	3	2104	junction_10	250.191453318473	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	9934	False	NA	-9	True	AATAAA	-15	NA	71642992	71624681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818
ENSMUSG00000026193.16_71663256_71692331_1	chr1	-	3421	20	ISM	ENSMUSG00000026193.16	ENSMUST00000190780.7	7694	44	0	38573	0	5360	5prime_fragment	FALSE	canonical	3	1514	junction_11	100.79176855983	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGAGTCTTTACTACCCG	NA	False	NA	NA	False	NA	NA	NA	71692331	71663255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ENSMUSG00000026196.8_71069485_71142126_1	chr1	-	2652	11	FSM	ENSMUSG00000026196.8	ENSMUST00000027393.8	5659	11	179	2828	179	-2828	multi-exon	FALSE	canonical	3	27	junction_8	5.88642506110457	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTCTTTTT	NA	False	NA	0	True	NA	NA	NA	71142126	71069484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71092771_71092881_71104637_71104811_71106266_71106348_71113701_71114640_71127267_71127411_71128629_71128687_71141826
ENSMUSG00000026196.8_71069890_71142126_1	chr1	-	2247	11	FSM	ENSMUSG00000026196.8	ENSMUST00000027393.8	5659	11	179	3233	179	-3233	multi-exon	FALSE	canonical	3	27	junction_8	5.88642506110457	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGACAGTGATGTGACTC	NA	False	NA	NA	False	NA	NA	NA	71142126	71069889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71092771_71092881_71104637_71104811_71106266_71106348_71113701_71114640_71127267_71127411_71128629_71128687_71141826
ENSMUSG00000026197.13_75145310_75148273_1	chr1	+	1085	10	NIC	ENSMUSG00000026197.13	novel	1206	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	47.0130005660373	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGCTGTTTCTTTTTC	2052	False	NA	16	True	AGTAAA	-22	NA	75145309	75148273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147980
ENSMUSG00000026199.18_75168836_75172182_1	chr1	+	1172	4	ISM	ENSMUSG00000026199.18	ENSMUST00000127625.3	1167	5	0	-4	0	4	intron_retention	FALSE	canonical	3	96	junction_1	11.0855260988773	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTTTCTTGTTTTCA	76	False	NA	NA	False	NA	NA	NA	75168835	75172182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706
ENSMUSG00000026201.13_75187490_75190886_1	chr1	+	1476	8	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	57.8389742195996	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187489	75190886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_75187669_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
ENSMUSG00000026201.13_75187490_75190886_2	chr1	+	1504	8	FSM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	8	1364	0	0	multi-exon	FALSE	canonical	3	167	junction_4	30.7265756142723	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187489	75190886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
ENSMUSG00000026201.13_75187490_75190886_3	chr1	+	1610	8	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	72.9262977118624	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187489	75190886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_75187803_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
ENSMUSG00000026202.14_75191616_75195897_1	chr1	-	2055	4	FSM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	41	744	-10	0	multi-exon	FALSE	canonical	3	248	junction_2	27.6526068692749	2642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTGCTTTCTTTTGGC	NA	False	NA	-2	True	ATTAAA	-20	NA	75195897	75191615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_75193238_75193470_75193620_75193855_75194079_75195836
ENSMUSG00000026202.14_75192256_75195897_1	chr1	-	1415	4	FSM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	41	1384	-10	0	multi-exon	FALSE	canonical	3	248	junction_2	27.6526068692749	1899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTGTTCACTGTGTTT	NA	False	NA	-77	True	NA	NA	NA	75195897	75192255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_75193238_75193470_75193620_75193855_75194079_75195836
ENSMUSG00000026202.14_75192256_75195897_2	chr1	-	1409	4	NNC	ENSMUSG00000026202.14	novel	2840	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.104473525208	599	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTGTTCACTGTGTTT	NA	False	NA	-77	True	NA	NA	NA	75195897	75192255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_75193238_75193470_75193620_75193855_75194073_75195836
ENSMUSG00000026209.16_75285209_75294029_1	chr1	-	1757	15	NIC	ENSMUSG00000026209.16	novel	1571	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_14	246.159698039252	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75294029	75285208	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293788
ENSMUSG00000026209.16_75285209_75294029_2	chr1	-	1820	15	NIC	ENSMUSG00000026209.16	novel	1571	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	248.176831706584	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75294029	75285208	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293725
ENSMUSG00000026209.16_75285209_75294029_3	chr1	-	1567	15	FSM	ENSMUSG00000026209.16	ENSMUST00000066668.14	2488	15	252	669	-3	0	multi-exon	FALSE	canonical	3	522	junction_14	119.683362013511	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75294029	75285208	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
ENSMUSG00000026209.16_75285209_75294281_1	chr1	-	1819	15	FSM	ENSMUSG00000026209.16	ENSMUST00000066668.14	2488	15	0	669	0	0	multi-exon	FALSE	canonical	3	522	junction_14	119.683362013511	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75294281	75285208	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
ENSMUSG00000026219.15_84741056_84817037_1	chr1	-	1903	13	NNC	ENSMUSG00000026219.15	novel	3073	20	NA	NA	-5	2616	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_10	192.648265413075	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATCAGGTAAAATACGAAT	7882	False	NA	NA	False	NA	NA	NA	84817037	84741055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ENSMUSG00000026219.15_84741056_84817037_2	chr1	-	1990	12	ISM	ENSMUSG00000026219.15	ENSMUST00000186894.7	3073	20	-12	8932	-5	2616	5prime_fragment	FALSE	canonical	3	439	junction_11	109.885439969795	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATCAGGTAAAATACGAAT	7882	False	NA	NA	False	NA	NA	NA	84817037	84741055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ENSMUSG00000026219.15_84741056_84827734_1	chr1	-	1993	12	NNC	ENSMUSG00000026219.15	novel	3073	20	NA	NA	-9497	2616	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_11	203.352114925388	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATCAGGTAAAATACGAAT	NA	False	NA	NA	False	NA	NA	NA	84827734	84741055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ENSMUSG00000026219.15_84741056_84827734_2	chr1	-	1906	13	NNC	ENSMUSG00000026219.15	novel	3073	20	NA	NA	-9497	2616	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_12	247.536192639918	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATCAGGTAAAATACGAAT	NA	False	NA	NA	False	NA	NA	NA	84827734	84741055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84827643
ENSMUSG00000026223.16_85822340_85836406_1	chr1	+	1902	6	FSM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	338	-10	0	10	multi-exon	FALSE	canonical	3	192	junction_3	14.9853261559434	300	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAAACCTCTTCTGACTT	NA	False	NA	2	True	NA	NA	NA	85822339	85836406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_85822511_85830730_85830872_85832934_85833124_85834142_85834254_85834728_85834880_85835267
ENSMUSG00000026229.18_85992363_86067007_1	chr1	+	588	5	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	0	134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	685.799305555204	1951	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGACCAGACTTTAGT	NA	False	NA	15	True	AATAAA	-15	NA	85992362	86067007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86066872
ENSMUSG00000026234.13_86278218_86287096_1	chr1	-	2399	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	26	5777	-10	0	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	15007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86287096	86278217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ENSMUSG00000026234.13_86278218_86287096_2	chr1	-	2393	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	117	junction_9	2039.97149301349	14942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86287096	86278217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283910_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ENSMUSG00000026238.15_86454448_86457989_1	chr1	+	771	5	FSM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	0	445	0	58	multi-exon	FALSE	canonical	3	19621	junction_2	1755.19477195552	3774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGTATTTTTTATTT	NA	False	NA	NA	False	TTTAAA	-8	NA	86454447	86457989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686
ENSMUSG00000026247.14_87075377_87077343_1	chr1	-	731	4	NIC	ENSMUSG00000026247.14	novel	3033	18	NA	NA	-705	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	5.09901951359278	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGGCCTCCAGACAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	87077343	87075376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_87075809_87075947_87076025_87076346_87076443_87077217
ENSMUSG00000026248.10_79753833_79759162_1	chr1	+	1320	4	NNC	ENSMUSG00000026248.10	novel	1424	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	147.790392109907	1059	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTTTCTTTAT	NA	False	NA	13	True	AATAAA	-15	NA	79753832	79759162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_79754029_79755574_79756044_79757204_79757384_79758686
ENSMUSG00000026248.10_79753833_79759162_2	chr1	+	1318	4	NNC	ENSMUSG00000026248.10	novel	1424	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	148.041285532861	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTTTCTTTAT	NA	False	NA	13	True	AATAAA	-15	NA	79753832	79759162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_79754021_79755574_79756044_79757204_79757384_79758680
ENSMUSG00000026248.10_79753833_79759162_3	chr1	+	1326	4	FSM	ENSMUSG00000026248.10	ENSMUST00000027464.9	1424	4	98	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	2.44948974278318	1777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTTTCTTTAT	NA	False	NA	13	True	AATAAA	-15	NA	79753832	79759162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_79754029_79755574_79756044_79757204_79757384_79758680
ENSMUSG00000026249.11_79772038_79836353_1	chr1	-	2026	9	FSM	ENSMUSG00000026249.11	ENSMUST00000027467.11	2210	9	60	124	-1	-124	multi-exon	FALSE	canonical	3	45	junction_4	6.12244844812923	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTCGCTGGACACCATTT	NA	False	NA	-5	True	AATAAA	-14	NA	79836353	79772037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_79772760_79774542_79774627_79777184_79777272_79779172_79779274_79780563_79780763_79788270_79788469_79794444_79794673_79798993_79799275_79836227
ENSMUSG00000026251.14_87118329_87119647_1	chr1	+	697	3	FSM	ENSMUSG00000026251.14	ENSMUST00000189970.2	538	3	0	-159	0	159	multi-exon	FALSE	canonical	2	2	junction_1	1.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGTGTGCATTGGAAG	NA	False	NA	NA	False	ATTAAA	-15	NA	87118328	87119647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87118465_87118696_87118852_87119241
ENSMUSG00000026254.18_87141701_87155786_1	chr1	+	950	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113233.8	1807	7	65	792	0	0	multi-exon	FALSE	canonical	3	965	junction_1	498.771713534581	3818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCATGCTCTTGCTC	NA	False	NA	15	True	AATAAA	-15	NA	87141700	87155786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ENSMUSG00000026260.13_92367208_92401499_1	chr1	-	1461	10	FSM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	83	476	-10	-207	multi-exon	FALSE	canonical	3	1166	junction_5	87.5025220095095	3946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401499	92367207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ENSMUSG00000026270.12_92862488_92875663_1	chr1	+	2512	12	FSM	ENSMUSG00000026270.12	ENSMUST00000027488.11	2902	12	390	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	15.6743724089108	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTAGTCTTGTTCCAAA	2650	False	NA	NA	False	AATAAA	-14	NA	92862487	92875663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92874936_92874983_92875230
ENSMUSG00000026273.14_93228927_93233585_2	chr1	-	1108	4	NNC	ENSMUSG00000026273.14	novel	1366	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.5270067514739	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGGAGTCTTTTTCTCT	NA	False	NA	1	True	AATAAA	-39	NA	93233585	93228926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_93229312_93230439_93230625_93232329_93232829_93233546
ENSMUSG00000026273.14_93228927_93233585_3	chr1	-	1103	4	FSM	ENSMUSG00000026273.14	ENSMUST00000112944.8	3097	4	0	1994	0	0	multi-exon	FALSE	canonical	3	13	junction_1	30.4448499567478	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGGAGTCTTTTTCTCT	NA	False	NA	1	True	AATAAA	-39	NA	93233585	93228926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_93229307_93230439_93230625_93232329_93232829_93233546
ENSMUSG00000026274.12_93237560_93270511_1	chr1	-	4719	18	FSM	ENSMUSG00000026274.12	ENSMUST00000027493.4	5779	18	0	1060	0	0	multi-exon	FALSE	canonical	3	108	junction_17	39.6765468974106	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAAGGAGTGTTTAAGT	NA	False	NA	-9	True	ATTAAA	-27	NA	93270511	93237559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ENSMUSG00000026280.18_93682627_93715907_1	chr1	+	1743	13	NNC	ENSMUSG00000026280.18	novel	4173	13	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	94.7596374459553	1151	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGAATTTCTGGGGCAC	NA	False	NA	20	True	ATTAAA	-26	NA	93682626	93715907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712479_93712621_93713631_93713689_93714232_93714327_93715407
ENSMUSG00000026281.16_93720298_93729628_1	chr1	-	983	5	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	131	junction_4	555.767656039824	5263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGCTTTGGTTCTGCCCCT	2338	False	NA	-20	True	AATAAA	-24	NA	93729628	93720297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729411
ENSMUSG00000026281.16_93720298_93729628_2	chr1	-	903	5	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	883.642284807602	1724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGCTTTGGTTCTGCCCCT	2338	False	NA	-20	True	AATAAA	-24	NA	93729628	93720297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_93720666_93722447_93722574_93726101_93726193_93728523_93728633_93729419
ENSMUSG00000026281.16_93728217_93729628_1	chr1	-	625	2	FSM	ENSMUSG00000026281.16	ENSMUST00000112890.3	1055	2	0	430	0	-430	multi-exon	FALSE	canonical	3	2511	junction_1	0	5536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTGGTTTTGTTT	2338	False	NA	-6	True	ATTAAA	-16	NA	93729628	93728216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_93728633_93729419
ENSMUSG00000026281.16_93728217_93729628_2	chr1	-	616	2	NNC	ENSMUSG00000026281.16	novel	1055	2	NA	NA	0	-430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTGGTTTTGTTT	2338	False	NA	-6	True	ATTAAA	-16	NA	93729628	93728216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_93728633_93729428
ENSMUSG00000026281.16_93728331_93729628_1	chr1	-	511	2	FSM	ENSMUSG00000026281.16	ENSMUST00000112890.3	1055	2	0	544	0	-544	multi-exon	FALSE	canonical	3	2511	junction_1	0	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGTCGTATTTGAGATAAAA	2338	False	NA	-120	True	GATAAA	-27	NA	93729628	93728330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_93728633_93729419
ENSMUSG00000026288.15_87603961_87611588_1	chr1	+	409	4	ISM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	0	36636	0	15874	5prime_fragment	FALSE	canonical	3	485	junction_1	26.0426999794995	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCCACCCACCCCAACC	9370	False	NA	NA	False	NA	NA	NA	87603960	87611588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464
ENSMUSG00000026288.15_87603961_87645793_1	chr1	+	2725	21	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	0	-1623	intron_retention	FALSE	canonical	0	0	junction_5	114.331491724721	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGTCAAGAGGCCTGT	9370	False	NA	NA	False	NA	NA	NA	87603960	87645793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623059_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411
ENSMUSG00000026288.15_87603961_87647434_1	chr1	+	3335	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	0	790	0	18	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTTAAGTGCTTT	9370	False	NA	20	True	NA	NA	NA	87603960	87647434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ENSMUSG00000026305.16_90981176_91056666_1	chr1	+	2137	12	NIC	ENSMUSG00000026305.16	novel	2849	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	27.2156979494562	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	False	NA	NA	False	AATGAA	-13	NA	90981175	91056666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
ENSMUSG00000026317.8_14938855_14947279_1	chr8	+	1672	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	744	4441	-149	2220	multi-exon	FALSE	canonical	3	162	junction_1	24.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTTGCTGATCATATT	NA	False	NA	16	True	AAGAAA	-2	NA	14938854	14947279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_14939119_14944571_14945231_14946530
ENSMUSG00000026317.8_14938855_14947939_2	chr8	+	2332	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	744	3781	-149	2880	multi-exon	FALSE	canonical	3	162	junction_1	24.5	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGTATGATGCCTAT	NA	False	NA	10	True	TATAAA	-18	NA	14938854	14947939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_14939119_14944571_14945231_14946530
ENSMUSG00000026317.8_14939004_14947939_1	chr8	+	2183	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	893	3781	0	2880	multi-exon	FALSE	canonical	3	162	junction_1	24.5	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGTATGATGCCTAT	NA	False	NA	10	True	TATAAA	-18	NA	14939003	14947939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_14939119_14944571_14945231_14946530
ENSMUSG00000026333.15_97697904_97720491_1	chr1	+	1625	8	NIC	ENSMUSG00000026333.15	novel	2046	8	NA	NA	0	-203	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	18.8148877222268	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGCGTAGAATTCAGA	NA	False	NA	NA	False	AATAAA	-18	NA	97697903	97720491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_97697981_97703171_97703318_97705050_97705245_97710862_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
ENSMUSG00000026333.15_97697904_97720491_2	chr1	+	1836	8	FSM	ENSMUSG00000026333.15	ENSMUST00000112844.10	2046	8	7	203	0	-203	multi-exon	FALSE	canonical	3	41	junction_1	7.99744857273052	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGCGTAGAATTCAGA	NA	False	NA	NA	False	AATAAA	-18	NA	97697903	97720491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_97697981_97703171_97703318_97705050_97705245_97710651_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
ENSMUSG00000026333.15_97697904_97720491_3	chr1	+	1569	8	FSM	ENSMUSG00000026333.15	ENSMUST00000027571.13	2494	8	-18	943	0	-203	multi-exon	FALSE	canonical	3	8	junction_3	17.1939714162035	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGCGTAGAATTCAGA	NA	False	NA	NA	False	AATAAA	-18	NA	97697903	97720491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_97697981_97703171_97703318_97705050_97705245_97710918_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
ENSMUSG00000026339.19_121358804_121429442_1	chr1	+	2501	24	FSM	ENSMUSG00000026339.19	ENSMUST00000036025.16	7274	24	26	4747	0	125	multi-exon	FALSE	canonical	3	57	junction_5	11.149101195474	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCCCTGAAATGTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	121358803	121429442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
ENSMUSG00000026341.17_125320643_125363444_1	chr1	-	2527	13	NNC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	57	junction_2	867.728548183897	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTTTTTCTTCGTG	NA	False	NA	-4	True	AATAAA	-20	NA	125363444	125320642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_125321828_125322804_125322883_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ENSMUSG00000026341.17_125320979_125363444_1	chr1	-	2197	13	FSM	ENSMUSG00000026341.17	ENSMUST00000027579.17	2554	13	20	337	0	242	multi-exon	FALSE	canonical	3	364	junction_12	606.954190107366	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCAGGCTCTTT	NA	False	NA	-3	True	AATAAA	-20	NA	125363444	125320978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ENSMUSG00000026342.11_125488753_125523412_1	chr1	+	2588	16	FSM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	0	145	0	-145	multi-exon	FALSE	canonical	3	89	junction_1	11.5808270669912	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTATTGAGTAATTTTGT	NA	False	NA	NA	False	AATAAA	-29	NA	125488752	125523412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_125489022_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
ENSMUSG00000026349.15_127701901_127730655_1	chr1	+	1595	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	0	5143	0	-3014	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCCGCCTGACAAAGGT	NA	False	NA	NA	False	AAAAAG	-35	NA	127701900	127730655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ENSMUSG00000026349.15_127701901_127733507_1	chr1	+	4447	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	0	2291	0	-162	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGCTAATGATGGACAG	NA	False	NA	13	True	AATAAA	-22	NA	127701900	127733507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ENSMUSG00000026349.15_127701901_127733507_2	chr1	+	4349	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	0	162	0	-162	multi-exon	FALSE	canonical	3	163	junction_9	104.758039851747	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGCTAATGATGGACAG	NA	False	NA	13	True	AATAAA	-22	NA	127701900	127733507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ENSMUSG00000026353.10_128172040_128205059_1	chr1	+	1916	13	FSM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	141	2056	141	302	multi-exon	FALSE	canonical	3	326	junction_2	38.8918550456119	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCCACCACCGCTCCTA	235	False	NA	NA	False	NA	NA	NA	128172039	128205059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ENSMUSG00000026353.10_128172040_128205329_1	chr1	+	2186	13	FSM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	141	1786	141	572	multi-exon	FALSE	canonical	3	326	junction_2	38.8918550456119	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGATCTTATTTTTG	235	False	NA	14	True	AATAAA	-17	NA	128172039	128205329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ENSMUSG00000026353.10_128172040_128205482_1	chr1	+	2339	13	FSM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	141	1633	141	725	multi-exon	FALSE	canonical	3	326	junction_2	38.8918550456119	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTAGGTTACTGATGCA	235	False	NA	5	True	AATAAA	-15	NA	128172039	128205482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ENSMUSG00000026355.12_128259327_128287391_1	chr1	-	2894	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	831.161903226441	3793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287391	128259326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263597_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ENSMUSG00000026356.16_128291444_128345096_1	chr1	-	2170	16	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	506.478544022899	5147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTGTTGTGTGACTTT	NA	False	NA	-4	True	AATAAA	-14	NA	128345096	128291443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333201_128341396_128341490_128343090_128343149_128344888
ENSMUSG00000026374.15_118226247_118238966_1	chr1	-	3144	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	180	3739	0	1133	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTGCTGCTGTTTGAA	NA	False	NA	-4	True	AATAAA	-24	NA	118238966	118226246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
ENSMUSG00000026374.15_118227643_118238966_1	chr1	-	1748	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	180	5135	0	-263	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	2008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGATTGGCAGTATT	NA	False	NA	NA	False	AGTAAA	-17	NA	118238966	118227642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
ENSMUSG00000026374.15_118228345_118238966_1	chr1	-	1046	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	180	5837	0	274	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	1415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCCACGGATGGGGTTT	NA	False	NA	NA	False	NA	NA	NA	118238966	118228344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
ENSMUSG00000026377.13_118249584_118260671_1	chr1	+	993	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	15	881	0	0	multi-exon	FALSE	canonical	3	402	junction_6	29.1985539976821	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGCCAGCGTTCTGTGCA	NA	False	NA	NA	False	AAAAAG	-29	NA	118249583	118260671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
ENSMUSG00000026377.13_118249584_118261320_1	chr1	+	1642	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	15	232	0	-232	multi-exon	FALSE	canonical	3	402	junction_6	29.1985539976821	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCTTCCTTTTTGTCCA	NA	False	NA	24	True	AATATA	-18	NA	118249583	118261320	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
ENSMUSG00000026380.11_118555676_118606054_1	chr1	+	2425	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	0	6844	0	-6844	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGACTACATCACCAACTG	NA	False	NA	NA	False	NA	NA	NA	118555675	118606054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ENSMUSG00000026380.11_118555676_118607329_1	chr1	+	3700	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	0	5569	0	-5569	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATAGAAAAGTACCTCCA	NA	False	NA	NA	False	NA	NA	NA	118555675	118607329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ENSMUSG00000026380.11_118555676_118608589_1	chr1	+	4960	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	0	4309	0	-4309	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGCTTGGATAGAGAGG	NA	False	NA	NA	False	NA	NA	NA	118555675	118608589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ENSMUSG00000026389.17_120154362_120193016_1	chr1	-	2545	5	FSM	ENSMUSG00000026389.17	ENSMUST00000112640.8	2752	5	-2	209	-2	0	multi-exon	FALSE	canonical	3	36	junction_4	6.57647321898295	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCGCCTGTAGGCAG	NA	False	NA	NA	False	ATTAAA	-39	NA	120193016	120154361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120192961
ENSMUSG00000026398.15_136772553_136881368_1	chr1	-	2404	9	FSM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	0	-648	0	499	multi-exon	FALSE	canonical	3	24	junction_8	13.3041346956501	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGCTGAAGTTTGTTTT	NA	False	NA	-16	True	TATAAA	-22	NA	136881368	136772552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
ENSMUSG00000026398.15_136772750_136881368_1	chr1	-	2207	9	FSM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	0	-451	0	302	multi-exon	FALSE	canonical	3	24	junction_8	13.3041346956501	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCCCACCACCACCACC	NA	False	NA	NA	False	AATACA	-29	NA	136881368	136772749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
ENSMUSG00000026399.13_130374398_130390468_1	chr1	-	2125	9	ISM	ENSMUSG00000026399.13	ENSMUST00000027650.13	2533	10	13	7634	0	0	5prime_fragment	FALSE	canonical	3	38	junction_2	13.7244080018047	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCCTGATTGATTTGCC	NA	False	NA	NA	False	AATAAA	-24	NA	130390468	130374397	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
ENSMUSG00000026411.18_135945800_135962766_1	chr1	+	1397	6	FSM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	95	314	0	248	multi-exon	FALSE	canonical	3	317	junction_1	45.0759359303831	1257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGCAGATCTCAAGGGA	NA	False	NA	22	True	ATTAAA	-17	NA	135945799	135962766	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
ENSMUSG00000026418.17_135730258_135738727_1	chr1	+	1032	7	NIC	ENSMUSG00000026418.17	novel	1038	9	NA	NA	-2537	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	34.6862925215263	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTCTGTAGCCCTGT	1034	False	NA	43	True	ATTAAA	-24	NA	135730257	135738727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_135730362_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ENSMUSG00000026418.17_135735996_135738727_1	chr1	+	781	4	NNC	ENSMUSG00000026418.17	novel	1105	10	NA	NA	3201	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	38.7384391356527	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTCTGTAGCCCTGT	6772	False	NA	43	True	ATTAAA	-24	NA	135735995	135738727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_135736113_135736370_135736548_135737363_135737474_135738350
ENSMUSG00000026421.15_135647546_135679970_1	chr1	+	2081	6	FSM	ENSMUSG00000026421.15	ENSMUST00000097561.9	1828	6	-253	0	-253	0	multi-exon	FALSE	canonical	3	16	junction_1	177.543684765187	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTTCCTGTCTGTCT	NA	False	NA	24	True	AATAAA	-17	NA	135647545	135679970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_135647932_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ENSMUSG00000026421.15_135656885_135679483_1	chr1	+	1336	6	FSM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	0	487	0	-487	multi-exon	FALSE	canonical	3	392	junction_1	35.0884596413123	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGCCTGACCTCCTTA	NA	False	NA	NA	False	NA	NA	NA	135656884	135679483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_135657013_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ENSMUSG00000026421.15_135656885_135679736_1	chr1	+	1589	6	FSM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	0	234	0	-234	multi-exon	FALSE	canonical	3	392	junction_1	35.0884596413123	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTTCTTTCTTCACCC	NA	False	NA	NA	False	NA	NA	NA	135656884	135679736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_135657013_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ENSMUSG00000026425.16_131238264_131455101_1	chr1	-	2767	18	ISM	ENSMUSG00000026425.16	ENSMUST00000186543.7	3533	22	-16	15308	-11	9009	5prime_fragment	TRUE	canonical	3	115	junction_8	9.41544045869028	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCTGGAGGGTCCCATC	NA	False	NA	NA	False	NA	NA	NA	131455101	131238263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ENSMUSG00000026426.11_135074727_135084007_1	chr1	+	1548	7	FSM	ENSMUSG00000026426.11	ENSMUST00000027684.11	1713	7	165	0	165	0	multi-exon	FALSE	canonical	3	419	junction_3	43.3720980457354	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGTGTATGGTGCTGGT	NA	False	NA	15	True	AATAAA	-19	NA	135074726	135084007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_135074839_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
ENSMUSG00000026427.17_131080918_131099247_1	chr1	+	2233	14	ISM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	0	729	0	0	5prime_fragment	FALSE	canonical	3	546	junction_5	45.0821734931215	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTTTTGCTTGCATGT	NA	False	NA	25	True	ATTAAA	-18	NA	131080917	131099247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673
ENSMUSG00000026427.17_131080918_131101097_1	chr1	+	1891	15	FSM	ENSMUSG00000026427.17	ENSMUST00000068805.14	2009	15	0	118	0	-118	multi-exon	FALSE	canonical	3	546	junction_5	43.4650340351123	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGAAGTGACAGACTCAT	NA	False	NA	-77	True	AATACA	-31	NA	131080917	131101097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ENSMUSG00000026427.17_131080918_131101215_1	chr1	+	2004	15	NNC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	175.912489839786	1183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTATTTCTAATCTAAA	NA	False	NA	41	True	AATAAA	-22	NA	131080917	131101215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092861_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ENSMUSG00000026427.17_131080918_131101215_2	chr1	+	2004	15	NNC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	176.073109235676	1217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTATTTCTAATCTAAA	NA	False	NA	41	True	AATAAA	-22	NA	131080917	131101215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101045
ENSMUSG00000026427.17_131080918_131101215_3	chr1	+	2019	15	NNC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	171.640820985485	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTATTTCTAATCTAAA	NA	False	NA	41	True	AATAAA	-22	NA	131080917	131101215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088136_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ENSMUSG00000026429.10_134890303_134901900_1	chr1	+	939	7	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_1	233.142779333943	1588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	False	NA	15	True	AATAAA	-17	NA	134890302	134901900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_134890348_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
ENSMUSG00000026433.14_131794978_131800625_1	chr1	+	1334	5	FSM	ENSMUSG00000026433.14	ENSMUST00000112386.8	1202	5	16	-148	0	0	multi-exon	FALSE	canonical	3	82	junction_1	6.13901457890434	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGGTTGTGATGCTGGG	NA	False	NA	15	True	ATTAAA	-17	NA	131794977	131800625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
ENSMUSG00000026433.14_131795249_131800625_1	chr1	+	1063	5	FSM	ENSMUSG00000026433.14	ENSMUST00000112386.8	1202	5	287	-148	0	0	multi-exon	FALSE	canonical	3	82	junction_1	6.13901457890434	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGGTTGTGATGCTGGG	NA	False	NA	15	True	ATTAAA	-17	NA	131795248	131800625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
ENSMUSG00000026434.13_131838272_131857484_1	chr1	+	716	6	ISM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-22	6575	0	-325	5prime_fragment	FALSE	canonical	3	1163	junction_5	193.114059560665	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTAAAGGCAACAGGTGA	9282	False	NA	58	True	AAGAAA	-18	NA	131838271	131857484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350
ENSMUSG00000026434.13_131838446_131858993_1	chr1	+	780	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	152	5066	152	1184	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACACGGTTTGGGCTGTGG	9456	False	NA	10	True	ATTAAA	-20	NA	131838445	131858993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ENSMUSG00000026434.13_131838446_131860708_1	chr1	+	2495	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	152	3351	152	291	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCTAGTAGCAGAGAGTT	9456	False	NA	NA	False	NA	NA	NA	131838445	131860708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ENSMUSG00000026439.15_132405103_132433397_1	chr1	+	3628	14	FSM	ENSMUSG00000026439.15	ENSMUST00000190997.7	2856	14	-2	-770	0	0	multi-exon	FALSE	canonical	3	60	junction_13	83.2346081867393	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGTATACATGCTTGT	NA	False	NA	9	True	AATAAA	-18	NA	132405102	132433397	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ENSMUSG00000026439.15_132405103_132433397_3	chr1	+	3397	14	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	94.1666657939292	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGTATACATGCTTGT	NA	False	NA	9	True	AATAAA	-18	NA	132405102	132433397	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_132405266_132411789_132411816_132412483_132412540_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ENSMUSG00000026455.15_134413633_134418611_1	chr1	+	2006	5	ISM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	30340	0	10615	0	3prime_fragment	FALSE	canonical	3	174	junction_3	9.17537465175128	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTAAGAGAATTTGTGGG	5525	False	NA	17	True	ATTAAA	-18	NA	134413632	134418611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ENSMUSG00000026456.19_134333733_134339478_1	chr1	+	1882	8	NIC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	337	junction_4	39.0227563122351	1938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTCGTCGTGTCTGGG	8185	False	NA	43	True	AATAAA	-31	NA	134333732	134339478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ENSMUSG00000026456.19_134333733_134339478_2	chr1	+	1937	8	ISM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	214	0	0	0	intron_retention	FALSE	canonical	3	291	junction_1	56.9597064885811	1728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTCGTCGTGTCTGGG	8185	False	NA	43	True	AATAAA	-31	NA	134333732	134339478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230
ENSMUSG00000026456.19_134333733_134339478_3	chr1	+	2210	9	FSM	ENSMUSG00000026456.19	ENSMUST00000154237.8	2420	9	214	-4	0	0	multi-exon	FALSE	canonical	3	35	junction_5	130.869925880624	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTCGTCGTGTCTGGG	8185	False	NA	43	True	AATAAA	-31	NA	134333732	134339478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134336226_134337338_134337425_134338230_134338331_134338644
ENSMUSG00000026456.19_134333733_134339478_4	chr1	+	1623	9	FSM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	214	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	53.3666562565053	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTCGTCGTGTCTGGG	8185	False	NA	43	True	AATAAA	-31	NA	134333732	134339478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ENSMUSG00000026457.15_134343482_134360075_1	chr1	+	2147	8	FSM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	288	1011	180	-1011	multi-exon	FALSE	canonical	3	124	junction_1	322.905874956825	378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTGGCATTCAAAGAGTT	NA	False	NA	8	True	AATAAA	-16	NA	134343481	134360075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ENSMUSG00000026466.17_155882527_155911796_1	chr1	-	1690	10	FSM	ENSMUSG00000026466.17	ENSMUST00000097527.10	4234	10	377	2167	0	0	multi-exon	FALSE	canonical	3	47	junction_4	20.1935083078146	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTAATTATCTGTGAT	NA	False	NA	NA	False	AGTAAA	-36	NA	155911796	155882526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
ENSMUSG00000026466.17_155882527_155911796_2	chr1	-	1746	11	FSM	ENSMUSG00000026466.17	ENSMUST00000136331.8	2723	11	430	547	0	0	multi-exon	FALSE	canonical	2	47	junction_4	24.0865107477194	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTAATTATCTGTGAT	NA	False	NA	NA	False	AGTAAA	-36	NA	155911796	155882526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155895713_155895770_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
ENSMUSG00000026473.17_153775690_153784031_1	chr1	+	1354	7	FSM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	0	1438	0	103	multi-exon	FALSE	canonical	3	76	junction_3	27.7213315376845	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTAATCTTGCTTTTG	NA	False	NA	22	True	NA	NA	NA	153775689	153784031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_153775806_153778679_153778859_153780282_153780445_153782094_153782242_153782765_153782894_153783031_153783232_153783609
ENSMUSG00000026479.14_152998502_153007576_1	chr1	-	2336	7	NNC	ENSMUSG00000026479.14	novel	4916	23	NA	NA	-4596	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	44.5570794973519	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTTTCTGATTTTATT	NA	False	NA	-1	True	AATAAA	-19	NA	153007576	152998501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007492
ENSMUSG00000026480.13_152683588_152712006_1	chr1	+	1914	15	FSM	ENSMUSG00000026480.13	ENSMUST00000027754.7	2596	15	-53	735	0	-735	multi-exon	FALSE	canonical	0	0	junction_10	6.91382820210072	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGACAACTCAGAAGATTT	506	False	NA	NA	False	ATTAAA	-22	NA	152683587	152712006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_152683957_152686668_152686752_152692741_152692851_152697266_152697402_152699967_152700076_152701632_152701693_152703168_152703213_152706102_152706245_152706443_152706513_152707364_152707441_152709073_152709097_152709527_152709680_152709819_152709932_152710777_152710956_152711752
ENSMUSG00000026483.14_151447203_151595096_1	chr1	+	3858	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	79	2594	0	3	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTTACCAATGTAGAAAT	NA	False	NA	15	True	NA	NA	NA	151447202	151595096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ENSMUSG00000026484.14_151345157_151376562_1	chr1	-	3016	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	144	0	0	0	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTATTAGATGTGTACT	NA	False	NA	-6	True	CATAAA	-19	NA	151376562	151345156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ENSMUSG00000026484.14_151345278_151376562_1	chr1	-	2895	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	144	121	0	-121	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGTTATTGAAATTTT	NA	False	NA	-21	True	ATTAAA	-14	NA	151376562	151345277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ENSMUSG00000026484.14_151346130_151376562_1	chr1	-	2043	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	144	973	0	743	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTTGCACTTTAGCCT	NA	False	NA	-15	True	ATTAAA	-18	NA	151376562	151346129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ENSMUSG00000026484.14_151348854_151376706_1	chr1	-	945	5	ISM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	0	3697	0	-1784	5prime_fragment	FALSE	canonical	3	460	junction_4	61.6157447410968	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGGAAAAGGACGACAGC	NA	False	NA	NA	False	NA	NA	NA	151376706	151348853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ENSMUSG00000026492.12_179355620_179373806_1	chr1	-	2334	7	NIC	ENSMUSG00000026492.12	novel	2449	8	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	27.6008252694653	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTGTATATGTGTGT	7904	False	NA	NA	False	AATAAA	-15	NA	179373806	179355619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179373386
ENSMUSG00000026492.12_179356497_179373806_1	chr1	-	1546	8	FSM	ENSMUSG00000026492.12	ENSMUST00000027769.6	2449	8	26	877	-24	0	multi-exon	FALSE	canonical	3	69	junction_1	6.92820323027551	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTTTGTTTTAAAGTAC	7904	False	NA	NA	False	AATAAA	-31	NA	179373806	179356496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179372462_179372552_179373386
ENSMUSG00000026495.9_178233650_178309036_1	chr1	+	556	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	-18	3042	0	0	multi-exon	FALSE	canonical	3	53	junction_5	10.1447851956888	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTCAATTTCTAGTTGAA	NA	False	NA	NA	False	ATTAAA	-43	NA	178233649	178309036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
ENSMUSG00000026495.9_178233650_178309081_1	chr1	+	601	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	-18	2997	0	45	multi-exon	FALSE	canonical	3	53	junction_5	10.1447851956888	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTCACATTTTATTGT	NA	False	NA	NA	False	NA	NA	NA	178233649	178309081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
ENSMUSG00000026495.9_178233650_178309201_1	chr1	+	721	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	-18	2877	0	165	multi-exon	FALSE	canonical	3	53	junction_5	10.1447851956888	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGGAAGGACAAGTTAA	NA	False	NA	NA	False	CATAAA	-20	NA	178233649	178309201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
ENSMUSG00000026496.12_180396494_180428565_1	chr1	+	3613	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	0	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	464.579984484342	2316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATTTTCTTTTTTATC	3147	False	NA	16	True	AATAAA	-17	NA	180396493	180428565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408103_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ENSMUSG00000026496.12_180396494_180428565_3	chr1	+	3614	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	0	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	464.190936153014	2342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATTTTCTTTTTTATC	3147	False	NA	16	True	AATAAA	-17	NA	180396493	180428565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415490_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ENSMUSG00000026496.12_180396494_180428819_2	chr1	+	3868	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	464.190936153014	2955	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	3147	False	NA	10	True	ATTAAA	-18	NA	180396493	180428819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415490_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ENSMUSG00000026511.8_181952346_181959241_1	chr1	+	605	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	31	731	0	-129	multi-exon	FALSE	canonical	3	1020	junction_2	65.5	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATGTTGGGCAAATATA	NA	False	NA	NA	False	AATAAA	-27	NA	181952345	181959241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_181952541_181956248_181956318_181958900
ENSMUSG00000026516.9_180920535_180971769_1	chr1	-	3560	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	0	5832	0	289	multi-exon	TRUE	canonical	3	480	junction_18	71.7805568876937	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCATGCCAGAAAAGTCC	NA	False	NA	-19	True	GATAAA	-39	NA	180971769	180920534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ENSMUSG00000026516.9_180920993_180971769_1	chr1	-	3102	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	0	6290	0	-169	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAACAGATATCTATTA	NA	False	NA	-11	True	AATAAA	-12	NA	180971769	180920992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ENSMUSG00000026516.9_180921147_180971769_1	chr1	-	2948	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	0	6444	0	-323	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGGAGTAAAAAAAGTAG	NA	False	NA	NA	False	NA	NA	NA	180971769	180921146	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ENSMUSG00000026516.9_180941538_180971769_1	chr1	-	1998	14	ISM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	0	26835	0	-17991	5prime_fragment	FALSE	canonical	3	480	junction_9	88.1404876440457	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTATGAGTGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	180971769	180941537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ENSMUSG00000026519.17_180792844_180802669_1	chr1	+	1920	10	NNC	ENSMUSG00000026519.17	novel	3306	23	NA	NA	5212	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	15.1836494255019	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGCCTCTCATGCTTC	NA	False	NA	7	True	AATAAA	-23	NA	180792843	180802669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_180792955_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ENSMUSG00000026520.9_180731888_180735521_1	chr1	+	1418	7	FSM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	30	132	0	-131	multi-exon	FALSE	canonical	3	1025	junction_3	51.6120679255884	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCTTGGTGTTGCA	46	False	NA	11	True	ATTAAA	-14	NA	180731887	180735521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
ENSMUSG00000026520.9_180731888_180735653_1	chr1	+	1760	6	NIC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1025	junction_3	48.6399013156894	2079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	46	False	NA	32	True	NA	NA	NA	180731887	180735653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180734253_180734354_180734519_180735041
ENSMUSG00000026526.15_175428942_175453201_1	chr1	-	1634	10	FSM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	0	1002	0	0	multi-exon	FALSE	canonical	3	699	junction_3	99.2506491566916	4474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTTTAAAATTTAATTTA	792	False	NA	-14	True	AATAAA	-39	NA	175453201	175428941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446752_175453016
ENSMUSG00000026526.15_175428942_175453201_2	chr1	-	1629	10	NIC	ENSMUSG00000026526.15	novel	2636	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	275.591081939246	4457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTTTAAAATTTAATTTA	792	False	NA	-14	True	AATAAA	-39	NA	175453201	175428941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446747_175453016
ENSMUSG00000026547.16_172327812_172334947_1	chr1	+	1365	6	NNC	ENSMUSG00000026547.16	novel	1586	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	448.58916616432	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTTTCTAGGGCC	NA	False	NA	29	True	AATAAA	-26	NA	172327811	172334947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133_172334469_172334491
ENSMUSG00000026547.16_172327812_172334947_2	chr1	+	1367	6	NNC	ENSMUSG00000026547.16	novel	1586	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	448.58916616432	4404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTTTCTAGGGCC	NA	False	NA	29	True	AATAAA	-26	NA	172327811	172334947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133_172334452_172334472
ENSMUSG00000026547.16_172327812_172334947_3	chr1	+	1388	5	FSM	ENSMUSG00000026547.16	ENSMUST00000111230.8	1586	5	198	0	0	0	multi-exon	FALSE	canonical	3	984	junction_4	118.904373342615	3171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTTTCTAGGGCC	NA	False	NA	29	True	AATAAA	-26	NA	172327811	172334947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133
ENSMUSG00000026547.16_172327812_172334947_4	chr1	+	1366	6	NNC	ENSMUSG00000026547.16	novel	1586	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	448.58916616432	5161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTTTCTAGGGCC	NA	False	NA	29	True	AATAAA	-26	NA	172327811	172334947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133_172334455_172334476
ENSMUSG00000026547.16_172327812_172334947_5	chr1	+	1367	6	NNC	ENSMUSG00000026547.16	novel	1586	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	448.58916616432	5304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTTTCTAGGGCC	NA	False	NA	29	True	AATAAA	-26	NA	172327811	172334947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133_172334461_172334481
ENSMUSG00000026548.5_172302925_172305976_1	chr1	+	1147	4	FSM	ENSMUSG00000026548.5	ENSMUST00000027830.5	1313	4	0	166	0	-166	multi-exon	FALSE	canonical	1	3	junction_3	1.24721912892465	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCACCGTGCTTGATGC	NA	False	NA	NA	False	AATAAA	-19	NA	172302924	172305976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_172303107_172303699_172304042_172304772_172305046_172305626
ENSMUSG00000026553.18_171910096_171929847_1	chr1	+	1294	10	ISM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	0	20045	0	766	5prime_fragment	FALSE	canonical	3	733	junction_9	108.466527806144	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGCAGCAGGTAAGGAC	2764	False	NA	NA	False	NA	NA	NA	171910095	171929847	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776
ENSMUSG00000026553.18_171910372_171949897_1	chr1	+	2184	20	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	247.526903319692	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGCCGTTTCCCTGTT	3040	False	NA	15	True	AATAAA	-20	NA	171910371	171949897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939810_171949767
ENSMUSG00000026553.18_171910372_171949897_2	chr1	+	2096	19	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	253.104843352305	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGCCGTTTCCCTGTT	3040	False	NA	15	True	AATAAA	-20	NA	171910371	171949897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171949736
ENSMUSG00000026554.16_171975707_172023956_1	chr1	+	3614	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	22	-882	0	0	multi-exon	FALSE	canonical	3	418	junction_1	55.9704063816991	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGTGTGGTATGTG	NA	False	NA	16	True	AGTAAA	-16	NA	171975706	172023956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ENSMUSG00000026566.16_165419809_165436098_1	chr1	-	1877	4	ISM	ENSMUSG00000026566.16	ENSMUST00000191818.6	853	5	1017	-1170	0	0	3prime_fragment	FALSE	canonical	3	343	junction_1	214.123017601253	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	-1	True	AATACA	-19	NA	165436098	165419808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_165421247_165432178_165432312_165433177_165433392_165436006
ENSMUSG00000026568.7_165288793_165308689_1	chr1	+	703	4	NIC	ENSMUSG00000026568.7	novel	1025	5	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	205.825708360793	1292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTTACATTTGCCT	NA	False	NA	13	True	AATAAA	-18	NA	165288792	165308689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_165289081_165305789_165305875_165307035_165307148_165308471
ENSMUSG00000026568.7_165288934_165308689_1	chr1	+	562	4	NIC	ENSMUSG00000026568.7	novel	1025	5	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	205.825708360793	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTTACATTTGCCT	NA	False	NA	13	True	AATAAA	-18	NA	165288933	165308689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_165289081_165305789_165305875_165307035_165307148_165308471
ENSMUSG00000026575.16_164118740_164135058_1	chr1	+	2648	7	Genic_Genomic	ENSMUSG00000026575.16	novel	2536	16	NA	NA	-12950	-5678	multi-exon	FALSE	non_canonical	0	0	junction_1	0	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCAGACGGAAGTGAACG	3380	False	NA	NA	False	AATAGA	-42	NA	164118739	164135058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715
ENSMUSG00000026575.16_164118740_164135058_2	chr1	+	2561	8	Genic_Genomic	ENSMUSG00000026575.16	novel	2536	16	NA	NA	-12950	-5678	multi-exon	FALSE	non_canonical	0	0	junction_1	0	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCAGACGGAAGTGAACG	3380	False	NA	NA	False	AATAGA	-42	NA	164118739	164135058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715_164134924_164135010
ENSMUSG00000026575.16_164148951_164264869_1	chr1	+	1485	12	NNC	ENSMUSG00000026575.16	novel	597	4	NA	NA	8503	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	36.9940803841787	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTTATTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	164148950	164264869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_164149056_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
ENSMUSG00000026576.13_164135241_164264866_1	chr1	-	1651	13	NIC	ENSMUSG00000026576.13	novel	2580	6	NA	NA	6422	129437	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCAAGCCCCGCCTTCCT	NA	False	NA	NA	False	NA	NA	NA	164264866	164135240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_164135324_164135628_164135820_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
ENSMUSG00000026576.13_164135296_164264866_1	chr1	-	1682	14	NIC	ENSMUSG00000026576.13	novel	2580	6	NA	NA	6422	129382	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATTCCTGTACACAGGAA	NA	False	NA	NA	False	NA	NA	NA	164264866	164135295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_164135324_164135628_164135820_164140421_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
ENSMUSG00000026576.13_164264678_164285432_1	chr1	-	2088	6	FSM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	492	0	159	0	multi-exon	FALSE	canonical	3	1015	junction_5	105.155123508082	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	False	NA	-16	True	AATAAA	-16	NA	164285432	164264677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329
ENSMUSG00000026578.7_164103154_164115416_1	chr1	+	1768	5	NIC	ENSMUSG00000026578.7	novel	1909	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	20.6443091431997	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCATCTTGTAG	NA	False	NA	20	True	AATAAA	-20	NA	164103153	164115416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_164103331_164107435_164108384_164109959_164110107_164113809_164113965_164115075
ENSMUSG00000026584.15_163757626_163781591_1	chr1	+	2972	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	292	1104	252	220	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTTTATGTGCTATGAA	NA	False	NA	14	True	AATAAA	-23	NA	163757625	163781591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ENSMUSG00000026584.15_163781575_163822347_1	chr1	+	2909	24	NIC	ENSMUSG00000026584.15	novel	3718	14	NA	NA	2793	39652	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTCCCAGCAGGCTTTGA	1736	False	NA	NA	False	NA	NA	NA	163781574	163822347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ENSMUSG00000026594.15_156656122_156767163_1	chr1	-	1669	12	ISM	ENSMUSG00000026594.15	ENSMUST00000190648.7	2498	15	0	9675	0	0	5prime_fragment	FALSE	canonical	3	193	junction_3	27.825311029426	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAGGAGAAGAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	156767163	156656121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ENSMUSG00000026600.13_156257363_156301844_1	chr1	-	3046	16	FSM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	57	5268	-10	0	multi-exon	FALSE	canonical	2	51	junction_13	9.26258903091115	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACATGTACTCATATGT	1756	False	NA	-6	True	AATAAA	-20	NA	156301844	156257362	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250_156294369_156301717
ENSMUSG00000026603.14_189612691_189616179_1	chr1	-	641	3	ISM	ENSMUSG00000026603.14	ENSMUST00000130804.8	1077	6	5020	0	-1610	0	3prime_fragment	FALSE	canonical	3	363	junction_1	3.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	False	NA	-8	True	AATAAA	-15	NA	189616179	189612690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_189613064_189614305_189614415_189616020
ENSMUSG00000026603.14_189612691_189654450_1	chr1	-	1568	12	FSM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	110	2	0	0	multi-exon	FALSE	canonical	3	295	junction_3	24.6985126865085	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	False	NA	-8	True	AATAAA	-15	NA	189654450	189612690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_189613064_189614305_189614415_189616020_189616196_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ENSMUSG00000026604.18_189576864_189584177_1	chr1	+	2123	3	NNC	ENSMUSG00000026604.18	novel	3810	2	NA	NA	-376	4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	10	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTGGATTGTAGTTGC	NA	False	NA	6	True	AATAAA	-19	NA	189576863	189584177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_189576951_189578530_189578610_189582220
ENSMUSG00000026615.15_185095329_185106647_1	chr1	+	927	6	ISM	ENSMUSG00000026615.15	ENSMUST00000193788.6	3034	7	0	2514	0	0	5prime_fragment	FALSE	canonical	3	2037	junction_4	274.301002550118	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAAGCTTGGTTTTGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	185095328	185106647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314
ENSMUSG00000026617.17_185064377_185089974_1	chr1	+	2189	11	NNC	ENSMUSG00000026617.17	novel	1226	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	89.3647022039463	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGCCTTTATTCCTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	185064376	185089974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674_185089201_185089225
ENSMUSG00000026617.17_185064377_185089974_2	chr1	+	2190	11	NNC	ENSMUSG00000026617.17	novel	1226	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	89.3647022039463	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGCCTTTATTCCTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	185064376	185089974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674_185089201_185089224
ENSMUSG00000026617.17_185064377_185089974_3	chr1	+	2144	10	NNC	ENSMUSG00000026617.17	novel	2200	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	86.6005445767384	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGCCTTTATTCCTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	185064376	185089974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674_185089201_185089225
ENSMUSG00000026617.17_185064377_185089974_4	chr1	+	2145	10	NNC	ENSMUSG00000026617.17	novel	2200	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	86.6005445767384	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGCCTTTATTCCTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	185064376	185089974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674_185089201_185089224
ENSMUSG00000026622.16_191553622_191564317_1	chr1	+	2316	8	FSM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	66	845	0	-845	multi-exon	FALSE	canonical	3	373	junction_7	41.1061344049071	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATTTCTGAAGAGAAC	NA	False	NA	NA	False	NA	NA	NA	191553621	191564317	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
ENSMUSG00000026622.16_191553622_191565162_1	chr1	+	1906	9	NNC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	151.790151195656	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGATGTTTGTATTCT	NA	False	NA	29	True	TATAAA	-40	NA	191553621	191565162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248_191563734_191564988
ENSMUSG00000026627.8_191058109_191082398_1	chr1	+	1533	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	0	713	0	-713	multi-exon	TRUE	canonical	3	75	junction_7	21.6248156769306	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGACTTTTTTGTTTTT	NA	False	NA	7	True	NA	NA	NA	191058108	191082398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
ENSMUSG00000026627.8_191058109_191083481_1	chr1	+	2616	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	0	-370	0	370	multi-exon	FALSE	canonical	3	75	junction_7	21.6248156769306	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGTTTTGTTTTGTTT	NA	False	NA	NA	False	AATAAA	-30	NA	191058108	191083481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
ENSMUSG00000026634.17_190660689_190678693_1	chr1	+	3248	9	FSM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	0	466	0	-466	multi-exon	FALSE	canonical	3	110	junction_1	32.0263563334951	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACTCATTTATTCCAG	NA	False	NA	16	True	AATAAA	-16	NA	190660688	190678693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ENSMUSG00000026641.14_171238881_171246327_1	chr1	+	1753	10	FSM	ENSMUSG00000026641.14	ENSMUST00000001284.13	1115	10	0	-638	0	2	multi-exon	FALSE	canonical	3	42	junction_4	49.4805111903093	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTCCTCCTTT	6737	False	NA	65	True	GATAAA	-17	NA	171238880	171246327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ENSMUSG00000026641.14_171238881_171246327_2	chr1	+	1817	10	NIC	ENSMUSG00000026641.14	novel	1115	10	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	69.9292411329631	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTCCTCCTTT	6737	False	NA	65	True	GATAAA	-17	NA	171238880	171246327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_171239009_171241940_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ENSMUSG00000026641.14_171238881_171246327_3	chr1	+	1848	10	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	55.998015837865	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTCCTCCTTT	6737	False	NA	65	True	GATAAA	-17	NA	171238880	171246327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_171239009_171241940_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ENSMUSG00000026641.14_171239149_171246318_1	chr1	+	1715	10	NNC	ENSMUSG00000026641.14	novel	696	3	NA	NA	-100	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	62.1982096522932	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCACAGTTGTCTGTCT	7005	False	NA	56	True	GATAAA	-8	NA	171239148	171246318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_171239217_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ENSMUSG00000026648.19_3425202_3456391_1	chr2	+	3716	14	FSM	ENSMUSG00000026648.19	ENSMUST00000102988.10	2469	14	15	-1262	0	1262	multi-exon	FALSE	canonical	3	20	junction_5	4.46419019339905	4629	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTGAGTATGATGACAT	1036	False	NA	11	True	AATAAA	-22	NA	3425201	3456391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3437474_3437531_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
ENSMUSG00000026649.15_170941558_170954518_1	chr1	+	963	6	FSM	ENSMUSG00000026649.15	ENSMUST00000151340.8	793	6	0	-170	0	7	multi-exon	FALSE	canonical	0	0	junction_1	4.40908153700972	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGACCTGGGTTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	170941557	170954518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_170941666_170950614_170950763_170952602_170952666_170952838_170952920_170953602_170953780_170954132
ENSMUSG00000026656.16_170788127_170796222_1	chr1	-	1633	5	ISM	ENSMUSG00000026656.16	ENSMUST00000081103.12	1462	7	7474	0	-7023	0	3prime_fragment	FALSE	canonical	3	38	junction_2	18.6346451535842	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTTCTATTTACTTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	170796222	170788126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_170788670_170788764_170788803_170793270_170793394_170794014_170794270_170795548
ENSMUSG00000026659.14_170701757_170712993_1	chr1	-	1258	6	FSM	ENSMUSG00000026659.14	ENSMUST00000027970.14	1374	6	116	0	-17	0	multi-exon	FALSE	canonical	3	209	junction_3	62.7917191992702	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTGTTAGATGGTTT	NA	False	NA	-2	True	ATTAAA	-16	NA	170712993	170701756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708598_170712635
ENSMUSG00000026659.14_170701757_170712993_2	chr1	-	1271	6	FSM	ENSMUSG00000026659.14	ENSMUST00000166393.2	911	6	-28	-332	-17	0	multi-exon	FALSE	canonical	3	124	junction_5	89.0002247188174	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTGTTAGATGGTTT	NA	False	NA	-2	True	ATTAAA	-16	NA	170712993	170701756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708611_170712635
ENSMUSG00000026662.14_4886642_4911691_1	chr2	+	1375	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	267	3677	267	-1257	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTGTGTCTACACATC	4359	False	NA	20	True	ATTAAA	-20	NA	4886641	4911691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ENSMUSG00000026662.14_4886642_4911691_2	chr2	+	1271	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	267	-1257	combination_of_known_junctions	FALSE	canonical	3	91	junction_2	174.392707205693	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTGTGTCTACACATC	4359	False	NA	20	True	ATTAAA	-20	NA	4886641	4911691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_4886672_4889142_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ENSMUSG00000026662.14_4886642_4912948_1	chr2	+	2632	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	267	2420	267	0	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGAAAAAGCACCAAG	4359	False	NA	NA	False	NA	NA	NA	4886641	4912948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ENSMUSG00000026662.14_4886642_4913311_1	chr2	+	2891	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	267	363	combination_of_known_junctions	FALSE	canonical	3	91	junction_2	174.392707205693	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGGACTTGCTTCTA	4359	False	NA	23	True	AATAAA	-32	NA	4886641	4913311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_4886672_4889142_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ENSMUSG00000026662.14_4886642_4913311_2	chr2	+	2995	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	267	2057	267	363	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGGACTTGCTTCTA	4359	False	NA	23	True	AATAAA	-32	NA	4886641	4913311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ENSMUSG00000026664.8_4923891_4943541_1	chr2	+	1368	9	NNC	ENSMUSG00000026664.8	novel	1438	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	142.551744991073	1965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATATTAAGTCAATTTCT	1052	False	NA	9	True	AATAAA	-20	NA	4923890	4943541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_4923956_4927647_4927698_4930408_4930520_4932160_4932330_4933481_4933564_4935523_4935706_4940779_4940930_4942486_4942622_4943117
ENSMUSG00000026669.15_4995535_5017536_1	chr2	-	3423	20	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	176.398189700575	1452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017536	4995534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015582_5017515
ENSMUSG00000026669.15_4995842_5017536_1	chr2	-	3121	20	FSM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	66	307	-10	0	multi-exon	FALSE	canonical	3	560	junction_19	72.612354435182	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGCTGCTTGTCTGTAA	NA	False	NA	NA	False	NA	NA	NA	5017536	4995841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ENSMUSG00000026669.15_4996183_5017536_1	chr2	-	2780	20	FSM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	66	648	-10	-112	multi-exon	FALSE	canonical	3	560	junction_19	72.612354435182	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCCTTACTCCTGTGGCT	NA	False	NA	91	True	NA	NA	NA	5017536	4996182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ENSMUSG00000026672.12_5025453_5051010_1	chr2	-	2095	11	ISM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	17846	0	-9002	0	3prime_fragment	FALSE	canonical	3	118	junction_4	15.7800506970035	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5051010	5025452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797
ENSMUSG00000026672.12_5026112_5051010_1	chr2	-	1436	11	ISM	ENSMUSG00000026672.12	ENSMUST00000027986.5	2411	15	17739	657	-9002	0	internal_fragment	FALSE	canonical	3	118	junction_4	15.7800506970035	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGTACTTCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	5051010	5026111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797
ENSMUSG00000026683.15_169325880_169358980_1	chr1	-	1975	14	FSM	ENSMUSG00000026683.15	ENSMUST00000111368.8	2405	14	53	377	0	0	multi-exon	TRUE	canonical	3	65	junction_13	32.5556419455247	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTTATCCAGGATGTT	NA	False	NA	-9	True	AATAAA	-26	NA	169358980	169325879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169358890
ENSMUSG00000026687.15_167177805_167195855_3	chr1	+	2339	11	NNC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	0	-246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	208.132265638944	1985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTTTTCTGTCCTT	NA	False	NA	16	True	AATAAA	-13	NA	167177804	167195855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_167177986_167180088_167180235_167181995_167182126_167183245_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ENSMUSG00000026688.6_167199950_167221410_1	chr1	-	675	6	NNC	ENSMUSG00000026688.6	novel	1097	6	NA	NA	0	-415	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	164.279761382831	1573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGCCTGCATCTCTTT	4956	False	NA	0	True	AATAAA	-31	NA	167221410	167199949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_167200212_167201361_167201428_167203020_167203079_167204829_167204904_167205860_167205985_167221319
ENSMUSG00000026688.6_167199950_167221410_2	chr1	-	682	6	FSM	ENSMUSG00000026688.6	ENSMUST00000028005.3	1097	6	0	415	0	-415	multi-exon	FALSE	canonical	3	373	junction_1	22.7912263820971	1575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGCCTGCATCTCTTT	4956	False	NA	0	True	AATAAA	-31	NA	167221410	167199949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_167200212_167201361_167201435_167203020_167203079_167204829_167204904_167205860_167205985_167221319
ENSMUSG00000026688.6_167199950_167221410_3	chr1	-	679	6	NNC	ENSMUSG00000026688.6	novel	1097	6	NA	NA	0	-415	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	164.005609660158	1573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGCCTGCATCTCTTT	4956	False	NA	0	True	AATAAA	-31	NA	167221410	167199949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_167200212_167201361_167201435_167203020_167203072_167204825_167204904_167205860_167205985_167221319
ENSMUSG00000026694.20_162361248_162376098_1	chr1	-	2967	8	FSM	ENSMUSG00000026694.20	ENSMUST00000028017.16	4541	8	22	1552	0	0	multi-exon	FALSE	canonical	3	51	junction_6	17.6704526812185	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAAAGTTGGTTTATCT	NA	False	NA	-11	True	NA	NA	NA	162376098	162361247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373336_162374097_162375672
ENSMUSG00000026696.16_162398196_162422729_1	chr1	+	1219	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	37	205	0	-205	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTGGTAATTTTTTGGTC	NA	False	NA	-89	True	AGTAAA	-24	NA	162398195	162422729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
ENSMUSG00000026698.9_161796797_161799193_1	chr1	+	1450	2	FSM	ENSMUSG00000026698.9	ENSMUST00000028021.7	2196	2	40	706	0	-706	multi-exon	FALSE	canonical	3	13	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATTGTCTAGTATTTTA	NA	False	NA	11	True	ATTAAA	-14	NA	161796796	161799193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_161796849_161797795
ENSMUSG00000026698.9_161796871_161799193_1	chr1	+	1453	2	FSM	ENSMUSG00000026698.9	ENSMUST00000160881.2	704	2	3	-752	0	-706	multi-exon	FALSE	canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATTGTCTAGTATTTTA	NA	False	NA	11	True	ATTAAA	-14	NA	161796870	161799193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_161796939_161797808
ENSMUSG00000026701.16_161068585_161078736_1	chr1	-	1424	5	NNC	ENSMUSG00000026701.16	novel	959	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	755.494995019821	9360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACCGTTGTCATGTTT	NA	False	NA	-11	True	AATAAA	-10	NA	161078736	161068584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_161069413_161071144_161071292_161071765_161071913_161074826_161074984_161078591
ENSMUSG00000026701.16_161068585_161078736_2	chr1	-	1542	6	FSM	ENSMUSG00000026701.16	ENSMUST00000051925.5	959	6	0	-583	0	0	multi-exon	FALSE	canonical	3	50	junction_5	839.164012574419	8636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACCGTTGTCATGTTT	NA	False	NA	-11	True	AATAAA	-10	NA	161078736	161068584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161076928_161077040_161078591
ENSMUSG00000026701.16_161069134_161078736_1	chr1	-	875	5	NNC	ENSMUSG00000026701.16	novel	959	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	755.494995019821	2453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGGCACCAAAACCTT	NA	False	NA	-20	True	ATTAAA	-2	NA	161078736	161069133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_161069413_161071144_161071292_161071765_161071913_161074826_161074984_161078591
ENSMUSG00000026701.16_161069378_161078736_1	chr1	-	638	5	FSM	ENSMUSG00000026701.16	ENSMUST00000071718.12	2387	5	53	1696	0	0	multi-exon	FALSE	canonical	3	1689	junction_3	62.8823305865805	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCAAACAATGTTTCCC	NA	False	NA	NA	False	NA	NA	NA	161078736	161069377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078591
ENSMUSG00000026705.17_160926102_160959004_1	chr1	-	2018	8	FSM	ENSMUSG00000026705.17	ENSMUST00000148952.8	4182	8	77	2087	-6	1587	multi-exon	FALSE	canonical	3	82	junction_4	11.5387545750335	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTATGTGTGTGACTT	NA	False	NA	NA	False	NA	NA	NA	160959004	160926101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
ENSMUSG00000026707.16_15042472_15054123_1	chr2	-	1304	5	ISM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	-32	42530	0	-1226	5prime_fragment	FALSE	canonical	3	61	junction_4	7.69334127671456	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCTCATTCTCATTTTA	946	False	NA	NA	False	AATAAA	-25	NA	15054123	15042471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
ENSMUSG00000026708.17_160898555_160913896_1	chr1	+	1680	5	FSM	ENSMUSG00000026708.17	ENSMUST00000111620.10	1910	5	218	12	0	2	multi-exon	FALSE	canonical	3	79	junction_2	18.1710621593786	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTTCCAATTGAAGTT	NA	False	NA	8	True	AATAAA	-14	NA	160898554	160913896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477_160911021_160913557
ENSMUSG00000026709.11_160869075_160898213_1	chr1	-	2637	16	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	15	junction_5	101.925768195399	624	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTATTTAGAGTCTTCC	NA	False	NA	-16	True	AATGAA	-26	NA	160898213	160869074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ENSMUSG00000026709.11_160869075_160898213_2	chr1	-	2150	17	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_16	96.678510409501	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTATTTAGAGTCTTCC	NA	False	NA	-16	True	AATGAA	-26	NA	160898213	160869074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160898112
ENSMUSG00000026715.13_160827185_160830110_1	chr1	+	607	3	NNC	ENSMUSG00000026715.13	novel	4970	8	NA	NA	10238	77	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.5	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAATGGACTTTTCCACT	NA	False	NA	NA	False	AATAAA	-17	NA	160827184	160830110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_160827473_160827558_160827624_160829856
ENSMUSG00000026718.18_14078909_14152351_1	chr2	+	2906	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	0	2094	0	0	multi-exon	TRUE	canonical	3	181	junction_8	24.7443735759998	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATTCTGATTTTGTTT	4682	False	NA	27	True	ATTAAA	-29	NA	14078908	14152351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ENSMUSG00000026718.18_14079000_14136210_1	chr2	+	1106	9	NIC	ENSMUSG00000026718.18	novel	3981	13	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	3	6	junction_8	77.975957833168	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACGTCTGCCAGAATTTG	4773	False	NA	NA	False	AATAAA	-19	NA	14078999	14136210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14136035
ENSMUSG00000026723.11_13514972_13549474_1	chr2	-	2636	11	FSM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	5	1147	0	-1147	multi-exon	FALSE	canonical	3	23	junction_8	5.37028863283902	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTACTCTTTTTGTTAA	9034	False	NA	NA	False	ATTAAA	-21	NA	13549474	13514971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194_13538305_13549379
ENSMUSG00000026723.11_13515922_13549474_1	chr2	-	1686	11	FSM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	5	2097	0	-2097	multi-exon	FALSE	canonical	3	23	junction_8	5.37028863283902	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGATCCTTAGAAAATTA	9034	False	NA	NA	False	TATAAA	-18	NA	13549474	13515921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194_13538305_13549379
ENSMUSG00000026723.11_13515983_13549474_1	chr2	-	1557	12	NNC	ENSMUSG00000026723.11	novel	3788	11	NA	NA	0	-2158	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.4437178262115	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGAATGCTTGAATTTT	9034	False	NA	NA	False	ATTAAA	-28	NA	13549474	13515982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_13516108_13516175_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194_13538305_13549379
ENSMUSG00000026728.10_13578738_13587636_1	chr2	+	1884	10	NIC	ENSMUSG00000026728.10	novel	2193	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	86.9850278020786	2135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTGGTGTGTTATTTT	9	False	NA	13	True	AATAAA	-13	NA	13578737	13587636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_13578872_13579204_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ENSMUSG00000026728.10_13579133_13587636_1	chr2	+	1815	9	NNC	ENSMUSG00000026728.10	novel	2193	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	98.5583583467176	2178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTGGTGTGTTATTTT	91	False	NA	13	True	AATAAA	-13	NA	13579132	13587636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_13579806_13580358_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ENSMUSG00000026749.12_38467775_38533932_1	chr2	+	1025	9	Genic_Genomic	ENSMUSG00000026749.12	novel	10338	10	NA	NA	63137	49314	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9952	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGCCGAGGGCGGAGCGA	NA	False	NA	NA	False	AAGAAA	-7	NA	38467774	38533932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_+_38467807_38478047_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ENSMUSG00000026749.12_38478048_38533771_1	chr2	+	1024	8	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	73410	49153	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	680	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCGGCCGCAGCCCAGT	4917	False	NA	NA	False	NA	NA	NA	38478047	38533771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533660
ENSMUSG00000026749.12_38478048_38533932_1	chr2	+	990	8	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	73410	49314	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2026	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGCCGAGGGCGGAGCGA	4917	False	NA	NA	False	AAGAAA	-7	NA	38478047	38533932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_38478301_38480708_38480861_38503443_38503503_38523862_38523971_38530079_38530226_38532189_38532288_38533369_38533464_38533852
ENSMUSG00000026749.12_38478048_38533932_3	chr2	+	986	8	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	73410	49314	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1695	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGCCGAGGGCGGAGCGA	4917	False	NA	NA	False	AAGAAA	-7	NA	38478047	38533932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533376_38533464_38533852
ENSMUSG00000026749.12_38478048_38533932_4	chr2	+	984	8	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	73410	49314	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1412	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGCCGAGGGCGGAGCGA	4917	False	NA	NA	False	AAGAAA	-7	NA	38478047	38533932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533378_38533464_38533852
ENSMUSG00000026749.12_38478048_38533932_5	chr2	+	983	8	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	73410	49314	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	888	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGCCGAGGGCGGAGCGA	4917	False	NA	NA	False	AAGAAA	-7	NA	38478047	38533932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_38478301_38480708_38480861_38503443_38503503_38523872_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ENSMUSG00000026749.12_38478048_38533932_6	chr2	+	985	8	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	73410	49314	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	968	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGCCGAGGGCGGAGCGA	4917	False	NA	NA	False	AAGAAA	-7	NA	38478047	38533932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_38478301_38480708_38480861_38503443_38503503_38523862_38523971_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ENSMUSG00000026749.12_38478048_38533932_7	chr2	+	983	8	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	73410	49314	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1138	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGCCGAGGGCGGAGCGA	4917	False	NA	NA	False	AAGAAA	-7	NA	38478047	38533932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532278_38533369_38533464_38533852
ENSMUSG00000026749.12_38478048_38533932_8	chr2	+	998	8	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	73410	49314	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGCCGAGGGCGGAGCGA	4917	False	NA	NA	False	AAGAAA	-7	NA	38478047	38533932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530079_38530226_38532189_38532288_38533369_38533464_38533852
ENSMUSG00000026749.12_38478048_38533932_9	chr2	+	934	7	NIC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	73410	49314	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGCCGAGGGCGGAGCGA	4917	False	NA	NA	False	AAGAAA	-7	NA	38478047	38533932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_38478301_38480708_38480861_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ENSMUSG00000026750.7_38478048_38533932_1	chr2	-	418	4	NNC	ENSMUSG00000026750.7	novel	1160	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	829.731281801524	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	2380	False	NA	-18	True	AATAAA	-24	NA	38533932	38478047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_38478228_38532223_38532288_38533369_38533464_38533852
ENSMUSG00000026750.7_38478048_38533932_2	chr2	-	993	8	FSM	ENSMUSG00000026750.7	ENSMUST00000028083.6	1160	8	167	0	0	0	multi-exon	FALSE	canonical	3	1531	junction_5	118.933011500129	9902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	2380	False	NA	-18	True	AATAAA	-24	NA	38533932	38478047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ENSMUSG00000026755.15_38898153_38905602_1	chr2	+	987	4	FSM	ENSMUSG00000026755.15	ENSMUST00000112862.7	1339	4	65	287	0	197	multi-exon	FALSE	canonical	0	0	junction_1	449.53704580997	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATCGCGGTGTGTTCTCT	NA	False	NA	19	True	AATAAA	-21	NA	38898152	38905602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_38898357_38903126_38903200_38903734_38903912_38905069
ENSMUSG00000026755.15_38898153_38905602_2	chr2	+	988	4	NNC	ENSMUSG00000026755.15	novel	1339	4	NA	NA	0	197	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	449.53704580997	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATCGCGGTGTGTTCTCT	NA	False	NA	19	True	AATAAA	-21	NA	38898152	38905602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_38898349_38903117_38903200_38903734_38903912_38905069
ENSMUSG00000026755.15_38898153_38905602_3	chr2	+	965	4	FSM	ENSMUSG00000026755.15	ENSMUST00000090993.8	752	4	-16	-197	0	197	multi-exon	FALSE	canonical	3	442	junction_1	241.831897537663	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATCGCGGTGTGTTCTCT	NA	False	NA	19	True	AATAAA	-21	NA	38898152	38905602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_38898337_38903128_38903200_38903734_38903912_38905069
ENSMUSG00000026755.15_38898153_38905889_1	chr2	+	1275	4	NNC	ENSMUSG00000026755.15	novel	1339	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	449.53704580997	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGGCTTCAAAAGTCATC	NA	False	NA	8	True	AATAAA	-19	NA	38898152	38905889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_38898349_38903117_38903200_38903734_38903912_38905069
ENSMUSG00000026761.13_48795218_48839253_1	chr2	-	1649	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	35	2382	0	110	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCATGGTCCATAAAATGAT	NA	False	NA	-39	True	AATAAA	-15	NA	48839253	48795217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ENSMUSG00000026761.13_48795218_48839253_2	chr2	-	1597	14	FSM	ENSMUSG00000026761.13	ENSMUST00000154784.8	1477	14	-10	-110	0	110	multi-exon	FALSE	canonical	3	68	junction_4	114.388107132055	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCATGGTCCATAAAATGAT	NA	False	NA	-39	True	AATAAA	-15	NA	48839253	48795217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800255_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ENSMUSG00000026761.13_48795328_48839253_1	chr2	-	1539	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	35	2492	0	0	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGCACTTAGTATGTT	NA	False	NA	NA	False	TATAAA	-12	NA	48839253	48795327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ENSMUSG00000026766.17_50169893_50186707_2	chr2	-	1285	8	NIC	ENSMUSG00000026766.17	novel	1342	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	208.37515226541	1563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50186707	50169892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186689
ENSMUSG00000026766.17_50169893_50186707_3	chr2	-	1265	8	NIC	ENSMUSG00000026766.17	novel	1351	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_6	203.005881085012	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50186707	50169892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182911_50186263_50186322_50186654
ENSMUSG00000026766.17_50169893_50186707_4	chr2	-	1280	8	FSM	ENSMUSG00000026766.17	ENSMUST00000134480.8	803	8	-8	-469	0	0	multi-exon	FALSE	canonical	3	69	junction_6	199.415574689068	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50186707	50169892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182926_50186263_50186322_50186654
ENSMUSG00000026766.17_50169893_50186707_5	chr2	-	1406	9	NIC	ENSMUSG00000026766.17	novel	1351	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	256.06270594329	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50186707	50169892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_50170415_50170584_50170671_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
ENSMUSG00000026766.17_50169893_50186813_1	chr2	-	1391	8	NIC	ENSMUSG00000026766.17	novel	1342	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	208.37515226541	1720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50186813	50169892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186689
ENSMUSG00000026767.13_12352074_12424248_1	chr2	-	1682	8	NIC	ENSMUSG00000026767.13	novel	1843	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	71.3370842678388	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCACTTTTACATTTG	NA	False	NA	-22	True	AATAAA	-19	NA	12424248	12352073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_12353015_12355739_12355812_12360087_12360176_12361711_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12423969
ENSMUSG00000026767.13_12352331_12424248_1	chr2	-	1425	8	NIC	ENSMUSG00000026767.13	novel	1221	9	NA	NA	-2	112	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	71.3370842678388	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATGTGGGAACTTCTAT	NA	False	NA	-2	True	AATAAA	-23	NA	12424248	12352330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_12353015_12355739_12355812_12360087_12360176_12361711_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12423969
ENSMUSG00000026767.13_12352729_12424248_1	chr2	-	1656	15	FSM	ENSMUSG00000026767.13	ENSMUST00000028105.13	2344	15	33	655	-2	0	multi-exon	FALSE	canonical	3	102	junction_11	25.5990473355904	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACGTTTAAATTATTTGT	NA	False	NA	-3	True	ATTAAA	-22	NA	12424248	12352728	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
ENSMUSG00000026775.10_23046530_23087086_1	chr2	+	2372	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	149	2186	0	1764	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGCAGTCTCCTTTGCA	7222	False	NA	5	True	AATATA	-5	NA	23046529	23087086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026775.10_23046530_23087280_1	chr2	+	2566	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	149	1992	0	1958	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATTGAAAAATGTCAATC	7222	False	NA	10	True	AATAAA	-22	NA	23046529	23087280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026775.10_23046530_23087626_1	chr2	+	2813	18	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	0	-1646	combination_of_known_splicesites	FALSE	canonical	3	33	junction_3	187.259104767536	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCATGTATGCCCATTT	7222	False	NA	11	True	ATTAAA	-3	NA	23046529	23087626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_23046744_23050203_23050336_23052512_23052676_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026775.10_23046530_23087721_1	chr2	+	3007	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	149	1551	0	-1551	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	2019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTGAATATCTGTATAA	7222	False	NA	106	True	AGTAAA	-13	NA	23046529	23087721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026779.7_23006556_23045924_1	chr2	-	4540	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	112	938	-15	-938	multi-exon	TRUE	canonical	3	112	junction_2	17.5310821963508	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCAGCAGTGTTGTTTC	NA	False	NA	NA	False	AAAAAG	-33	NA	23045924	23006555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ENSMUSG00000026779.7_23008151_23045924_1	chr2	-	2945	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	112	2533	-15	-2533	multi-exon	FALSE	canonical	3	112	junction_2	17.5310821963508	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGGAGTGAGCCGTAAG	NA	False	NA	-23	True	AATAAA	-22	NA	23045924	23008150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ENSMUSG00000026779.7_23008528_23045924_1	chr2	-	2568	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	112	2910	-15	-2910	multi-exon	FALSE	canonical	3	112	junction_2	17.5310821963508	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGACGACGAAACAGATAC	NA	False	NA	NA	False	NA	NA	NA	23045924	23008527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ENSMUSG00000026784.15_22785631_22830278_1	chr2	+	1632	11	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_4	102.88192261034	636	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGTCTTTGTTTCAC	5705	False	NA	19	True	AATAAA	-21	NA	22785630	22830278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805326_22805426_22805541_22819551_22819633_22819755_22819870_22825570_22825652_22829834
ENSMUSG00000026784.15_22785631_22830278_2	chr2	+	1610	12	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_1	98.1149604012836	624	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGTCTTTGTTTCAC	5705	False	NA	19	True	AATAAA	-21	NA	22785630	22830278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_22785775_22789930_22789996_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
ENSMUSG00000026785.15_29980956_29983636_1	chr2	+	1241	4	NIC	ENSMUSG00000026785.15	novel	3449	21	NA	NA	6291	2602	intron_retention	FALSE	non_canonical	0	0	junction_1	0	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGAAGGTGGGGCCGCG	780	False	NA	NA	False	NA	NA	NA	29980955	29983636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_29981846_29981999_29982078_29982416_29982554_29983500
ENSMUSG00000026785.15_29980956_29983636_2	chr2	+	1283	4	NIC	ENSMUSG00000026785.15	novel	3449	21	NA	NA	6291	2602	intron_retention	FALSE	non_canonical	0	0	junction_1	0	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGAAGGTGGGGCCGCG	780	False	NA	NA	False	NA	NA	NA	29980955	29983636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_29981846_29981999_29982078_29982416_29982554_29983458
ENSMUSG00000026785.15_29980956_29983636_3	chr2	+	1183	5	NIC	ENSMUSG00000026785.15	novel	3449	21	NA	NA	6291	2602	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGAAGGTGGGGCCGCG	780	False	NA	NA	False	NA	NA	NA	29980955	29983636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983458
ENSMUSG00000026785.15_29980956_29983636_4	chr2	+	1135	5	NNC	ENSMUSG00000026785.15	novel	3449	21	NA	NA	6291	2602	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGAAGGTGGGGCCGCG	780	False	NA	NA	False	NA	NA	NA	29980955	29983636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_29981579_29981678_29981846_29982005_29982078_29982416_29982554_29983500
ENSMUSG00000026790.20_29779732_29812551_1	chr2	+	2346	17	NIC	ENSMUSG00000026790.20	novel	2305	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	561	junction_4	172.1394783308	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCGTGTTGCACAAAGT	7128	False	NA	13	True	AATAAA	-17	NA	29779731	29812551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ENSMUSG00000026790.20_29779837_29812551_1	chr2	+	2241	17	NIC	ENSMUSG00000026790.20	novel	2305	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	561	junction_4	172.1394783308	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCGTGTTGCACAAAGT	7233	False	NA	13	True	AATAAA	-17	NA	29779836	29812551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ENSMUSG00000026790.20_29779837_29821299_1	chr2	+	3281	21	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	0	192	combination_of_known_junctions	FALSE	canonical	3	561	junction_4	193.045616370846	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATAGCAACTGGCATAG	7233	False	NA	NA	False	AATAAA	-21	NA	29779836	29821299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ENSMUSG00000026790.20_29779837_29821758_1	chr2	+	3740	21	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	561	junction_4	193.045616370846	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7233	False	NA	14	True	AATAAA	-14	NA	29779836	29821758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ENSMUSG00000026790.20_29779837_29821758_3	chr2	+	3643	20	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	268.155761574078	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7233	False	NA	14	True	AATAAA	-14	NA	29779836	29821758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ENSMUSG00000026796.17_32766281_32815266_1	chr2	+	3559	14	FSM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	155	0	155	0	multi-exon	TRUE	canonical	3	292	junction_12	30.0169577319103	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCATGTGCTGCTGGG	9012	False	NA	19	True	AATAAA	-19	NA	32766280	32815266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ENSMUSG00000026798.11_29666122_29677676_1	chr2	+	2372	9	NNC	ENSMUSG00000026798.11	novel	3026	7	NA	NA	-11383	-2974	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCGTGGTCCTTTCCCAA	NA	False	NA	NA	False	NA	NA	NA	29666121	29677676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_29666388_29666585_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ENSMUSG00000026798.11_29678283_29687000_1	chr2	+	1224	7	FSM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	12	755	0	2	multi-exon	FALSE	canonical	3	105	junction_3	15.3884877605162	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGGTTGTCCTAGAC	NA	False	NA	29	True	AATAAA	-19	NA	29678282	29687000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
ENSMUSG00000026798.11_29678283_29687000_2	chr2	+	1195	7	FSM	ENSMUSG00000026798.11	ENSMUST00000176348.8	860	7	51	-386	0	2	multi-exon	FALSE	canonical	1	1	junction_4	47.2666784203088	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGGTTGTCCTAGAC	NA	False	NA	29	True	AATAAA	-19	NA	29678282	29687000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680543_29685392_29685523_29685947_29686042_29686419
ENSMUSG00000026798.11_29678283_29687554_1	chr2	+	1778	7	FSM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	12	201	0	-201	multi-exon	FALSE	canonical	3	105	junction_3	15.3884877605162	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGGTTTGGGGAGATGT	NA	False	NA	NA	False	AATAAA	-15	NA	29678282	29687554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
ENSMUSG00000026799.16_29236845_29414567_1	chr2	+	1002	8	FSM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	14	238	0	0	multi-exon	FALSE	canonical	3	144	junction_3	14.0393034305954	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCGACCCATTCACCACA	NA	False	NA	NA	False	NA	NA	NA	29236844	29414567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
ENSMUSG00000026799.16_29351254_29414805_1	chr2	+	1008	6	NNC	ENSMUSG00000026799.16	novel	1254	8	NA	NA	-35269	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	71.1910106684826	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGTGTTCTGCTTCTT	4431	False	NA	32	True	AATAAA	-20	NA	29351253	29414805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_29351513_29361304_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
ENSMUSG00000026799.16_29352119_29414805_1	chr2	+	865	6	NNC	ENSMUSG00000026799.16	novel	1254	8	NA	NA	-34404	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.9844427636972	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGTGTTCTGCTTCTT	5296	False	NA	32	True	AATAAA	-20	NA	29352118	29414805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_29352235_29361304_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
ENSMUSG00000026799.16_29397151_29414805_1	chr2	+	629	4	NNC	ENSMUSG00000026799.16	novel	1254	8	NA	NA	2268	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.6193124631743	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGTGTTCTGCTTCTT	NA	False	NA	32	True	AATAAA	-20	NA	29397150	29414805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_29397233_29399434_29399477_29412785_29412864_29414378
ENSMUSG00000026807.9_28649701_28703177_1	chr2	+	674	4	NNC	ENSMUSG00000026807.9	novel	1567	13	NA	NA	17439	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.29983164553722	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAGCCTTCTTTTTTTAA	8348	False	NA	NA	False	AATAAA	-19	NA	28649700	28703177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_28649814_28649953_28650096_28699671_28699753_28702839
ENSMUSG00000026810.13_32460879_32463583_1	chr2	+	762	3	NIC	ENSMUSG00000026810.13	novel	655	3	NA	NA	0	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	196	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTCTCTGCCATCC	4782	False	NA	15	True	AATAAA	-16	NA	32460878	32463583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_32460925_32462308_32462412_32462970
ENSMUSG00000026810.13_32460879_32463583_2	chr2	+	1145	3	FSM	ENSMUSG00000026810.13	ENSMUST00000128039.2	655	3	0	-490	0	-8	multi-exon	FALSE	canonical	3	393	junction_2	5	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTCTCTGCCATCC	4782	False	NA	15	True	AATAAA	-16	NA	32460878	32463583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_32461308_32462308_32462412_32462970
ENSMUSG00000026812.17_28531262_28577124_1	chr2	+	3591	23	NIC	ENSMUSG00000026812.17	novel	7674	23	NA	NA	0	-1436	combination_of_known_junctions	FALSE	canonical	2	11	junction_16	13.3695101500725	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAATGTGGGGCAGCTCC	3465	False	NA	NA	False	NA	NA	NA	28531261	28577124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ENSMUSG00000026812.17_28531262_28577124_2	chr2	+	3606	23	FSM	ENSMUSG00000026812.17	ENSMUST00000028155.12	7674	23	13	4055	0	-1436	multi-exon	FALSE	canonical	3	21	junction_1	11.5017066645932	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAATGTGGGGCAGCTCC	3465	False	NA	NA	False	NA	NA	NA	28531261	28577124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ENSMUSG00000026814.17_32536607_32561497_1	chr2	+	867	4	ISM	ENSMUSG00000026814.17	ENSMUST00000167841.8	3403	15	-27	11184	0	-2260	5prime_fragment	FALSE	canonical	3	45	junction_1	67.0721005088305	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTCCTCCAGTTGGGCCA	555	False	NA	NA	False	NA	NA	NA	32536606	32561497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_32537037_32547530_32547683_32559434_32559576_32561353
ENSMUSG00000026814.17_32572622_32584197_1	chr2	+	2272	15	NIC	ENSMUSG00000026814.17	novel	3403	15	NA	NA	9244	11516	intron_retention	FALSE	non_canonical	0	0	junction_1	0	871	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGACGCCATCCTAAGA	272	False	NA	NA	False	NA	NA	NA	32572621	32584197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ENSMUSG00000026817.15_32519760_32523875_1	chr2	+	833	5	ISM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	244	1189	227	463	3prime_fragment	FALSE	canonical	3	270	junction_4	19.9374020373769	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTAGGATTGCTCCTTTC	NA	False	NA	NA	False	ACTAAA	-15	NA	32519759	32523875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUSG00000026817.15_32519760_32525070_1	chr2	+	2028	5	ISM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	244	-6	227	0	3prime_fragment	FALSE	canonical	3	270	junction_4	19.9374020373769	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	False	NA	17	True	AATAAA	-21	NA	32519759	32525070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUSG00000026827.13_57128394_57257687_1	chr2	+	2576	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	0	3044	0	-178	multi-exon	TRUE	canonical	3	146	junction_2	27.9815089612766	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGTGTGTTTGCCAA	NA	False	NA	122	True	AAAACA	-14	NA	57128393	57257687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ENSMUSG00000026827.13_57128394_57258716_1	chr2	+	3605	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	0	2015	0	851	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTGTCCTTTGAACTCAG	NA	False	NA	NA	False	AATACA	-20	NA	57128393	57258716	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ENSMUSG00000026831.17_28352013_28356328_1	chr2	-	752	4	NNC	ENSMUSG00000026831.17	novel	812	3	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	63.8957484240279	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCCACGCCTCTTATT	NA	False	NA	0	True	ATTAAA	-19	NA	28356328	28352012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_28352447_28355148_28355228_28356045_28356123_28356166
ENSMUSG00000026831.17_28352013_28356328_2	chr2	-	754	4	NNC	ENSMUSG00000026831.17	novel	812	3	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	63.8957484240279	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCCACGCCTCTTATT	NA	False	NA	0	True	ATTAAA	-19	NA	28356328	28352012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_28352447_28355148_28355228_28356045_28356123_28356164
ENSMUSG00000026842.17_31649955_31690985_1	chr2	+	2540	11	FSM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	0	3254	0	634	multi-exon	FALSE	canonical	3	93	junction_1	30.1131200641846	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCAGGCAGGTCACTGCC	NA	False	NA	NA	False	NA	NA	NA	31649954	31690985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ENSMUSG00000026843.16_31462663_31507532_1	chr2	+	3815	18	FSM	ENSMUSG00000026843.16	ENSMUST00000055244.13	3648	18	-166	-1	0	0	multi-exon	FALSE	canonical	3	582	junction_10	50.5976051514182	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	493	False	NA	30	True	AATAAA	-31	NA	31462662	31507532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ENSMUSG00000026848.15_30843003_30849027_1	chr2	+	3008	5	FSM	ENSMUSG00000026848.15	ENSMUST00000156711.8	2809	5	-196	-3	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.5918570377542	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGAGCTTTTCCTTG	NA	False	NA	13	True	AATAAA	-18	NA	30843002	30849027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30843236_30843763_30844021_30845779_30845966_30846459_30846588_30846823
ENSMUSG00000026849.19_30850639_30857911_1	chr2	-	1359	5	NNC	ENSMUSG00000026849.19	novel	1401	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	240.429173562611	979	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGGCTTTGTGTGTCTT	NA	False	NA	-8	True	TTTAAA	-30	NA	30857911	30850638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_30851210_30853486_30853607_30853705_30853882_30857101_30857368_30857685
ENSMUSG00000026849.19_30850639_30857911_2	chr2	-	1360	5	NNC	ENSMUSG00000026849.19	novel	1401	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	220.841996685413	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGGCTTTGTGTGTCTT	NA	False	NA	-8	True	TTTAAA	-30	NA	30857911	30850638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_30851210_30853486_30853615_30853705_30853882_30857108_30857368_30857685
ENSMUSG00000026851.10_30862848_30871953_1	chr2	-	1325	9	FSM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	0	659	0	-659	multi-exon	FALSE	canonical	3	349	junction_7	16.1240309786356	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTGTCTTCTAATGT	NA	False	NA	NA	False	ATTAAA	-14	NA	30871953	30862847	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
ENSMUSG00000026851.10_30862848_30871953_2	chr2	-	1268	8	NNC	ENSMUSG00000026851.10	novel	1984	9	NA	NA	0	-659	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_6	122.978345530373	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTGTCTTCTAATGT	NA	False	NA	NA	False	ATTAAA	-14	NA	30871953	30862847	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30871499_30871555_30871789
ENSMUSG00000026851.10_30862848_30872213_1	chr2	-	1585	9	FSM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	-260	659	0	-659	multi-exon	FALSE	canonical	3	349	junction_7	16.1240309786356	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTGTCTTCTAATGT	NA	False	NA	NA	False	ATTAAA	-14	NA	30872213	30862847	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
ENSMUSG00000026851.10_30862848_30872213_2	chr2	-	1254	9	NNC	ENSMUSG00000026851.10	novel	1984	9	NA	NA	0	-659	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_8	113.962438987589	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTGTCTTCTAATGT	NA	False	NA	NA	False	ATTAAA	-14	NA	30872213	30862847	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30872120
ENSMUSG00000026853.16_30282440_30290539_1	chr2	-	2075	8	NIC	ENSMUSG00000026853.16	novel	3036	8	NA	NA	4434	8043	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	460	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCGGGCTTCGCAGAGCA	NA	False	NA	NA	False	NA	NA	NA	30290539	30282439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
ENSMUSG00000026857.10_30697953_30711197_1	chr2	+	1084	3	ISM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	115	1848	0	544	5prime_fragment	FALSE	canonical	3	480	junction_2	39	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATATGAGTACTTGCA	NA	False	NA	NA	False	NA	NA	NA	30697952	30711197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_30698096_30709640_30709845_30710460
ENSMUSG00000026857.10_30697969_30713032_1	chr2	+	1243	4	FSM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	131	13	0	3	multi-exon	FALSE	canonical	3	480	junction_2	33.3466640010661	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCCCAGGCAGTCTGTG	NA	False	NA	14	True	AATAAA	-20	NA	30697968	30713032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30698096_30709640_30709845_30710460_30710714_30712373
ENSMUSG00000026860.17_30235153_30249277_1	chr2	-	1427	11	FSM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	51	332	0	0	multi-exon	FALSE	canonical	3	213	junction_5	55.8	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTCCCAGCTCCCTTAA	NA	False	NA	44	True	NA	NA	NA	30249277	30235152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUSG00000026864.14_34662111_34666543_1	chr2	+	2527	9	FSM	ENSMUSG00000026864.14	ENSMUST00000028222.13	3672	9	129	1016	0	0	multi-exon	FALSE	canonical	3	1920	junction_1	305.196632312678	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGGTGTGTCTTTCTT	NA	False	NA	18	True	ACTAAA	-14	NA	34662110	34666543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ENSMUSG00000026869.13_34742114_34760951_1	chr2	-	1830	9	NNC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_6	223.608474794673	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGTTGGTATTCCG	NA	False	NA	-14	True	AATAAA	-14	NA	34760951	34742113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753548_34755538_34755668_34755993_34756108_34760761
ENSMUSG00000026869.13_34742114_34760951_2	chr2	-	2006	10	FSM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	23	2368	-6	0	multi-exon	FALSE	canonical	3	516	junction_4	38.498997902623	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGTTGGTATTCCG	NA	False	NA	-14	True	AATAAA	-14	NA	34760951	34742113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ENSMUSG00000026869.13_34742300_34760951_1	chr2	-	1820	10	FSM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	23	2554	-6	155	multi-exon	FALSE	canonical	3	516	junction_4	38.498997902623	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGATTCTCTCAACCAC	NA	False	NA	-21	True	AATAAA	-16	NA	34760951	34742299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ENSMUSG00000026887.10_36026646_36079608_1	chr2	+	1327	7	FSM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	245	1051	0	-1051	multi-exon	FALSE	canonical	3	141	junction_1	20.1941960858945	847	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGAGTGGTTTGGATGGA	NA	False	NA	26	True	AATAAA	-27	NA	36026645	36079608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
ENSMUSG00000026889.13_36006091_36026627_1	chr2	-	2459	6	FSM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	158	0	0	0	multi-exon	FALSE	canonical	3	240	junction_3	16.6300932047899	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGGTCTTATTGTCT	NA	False	NA	-23	True	AATAAA	-16	NA	36026627	36006090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36026493
ENSMUSG00000026889.13_36007605_36026627_1	chr2	-	945	6	FSM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	158	1514	0	0	multi-exon	FALSE	canonical	3	240	junction_3	16.6300932047899	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGAGATGCGCTAGTT	NA	False	NA	-7	True	AATAAA	-27	NA	36026627	36007604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36026493
ENSMUSG00000026889.13_36026646_36079608_1	chr2	-	1321	7	NNC	ENSMUSG00000026889.13	novel	2617	6	NA	NA	-52823	-10414	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	849	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCAGCGCGGCGGCGCAG	NA	False	NA	NA	False	NA	NA	NA	36079608	36026645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_36026712_36031457_36031670_36037920_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
ENSMUSG00000026889.13_36026646_36079608_2	chr2	-	926	8	NNC	ENSMUSG00000026889.13	novel	2617	6	NA	NA	-52823	-10414	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCAGCGCGGCGGCGCAG	NA	False	NA	NA	False	NA	NA	NA	36079608	36026645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086_36079167_36079567
ENSMUSG00000026890.20_35926338_35981416_1	chr2	-	1010	6	Fusion	ENSMUSG00000026895.8_ENSMUSG00000026890.20	novel	861	4	NA	NA	2869	0	multi-exon	FALSE	canonical	1	1	junction_4	606.206895374838	648	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTGTTTTATTATGCT	NA	False	NA	-1	True	ATTAAA	-15	NA	35981416	35926337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_-_35926654_35929723_35929890_35934361_35934526_35977379_35977484_35980973_35981149_35981331
ENSMUSG00000026893.5_62494629_62522137_1	chr2	+	1014	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	0	2316	0	1362	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATTGCAGATATATGCA	NA	False	NA	NA	False	AATATA	-19	NA	62494628	62522137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ENSMUSG00000026893.5_62494629_62522248_1	chr2	+	1125	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	0	2205	0	1473	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACATGACAGATTGTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	62494628	62522248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ENSMUSG00000026893.5_62494629_62524330_1	chr2	+	3207	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	0	123	0	-123	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTTTTTAAATGTTCT	NA	False	NA	5	True	AATAAA	-17	NA	62494628	62524330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ENSMUSG00000026914.16_61542104_61630397_1	chr2	+	1152	12	FSM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	66	323	0	0	multi-exon	FALSE	canonical	3	1717	junction_5	150.997564426748	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGGATACTGTTGTATT	8613	False	NA	-27	True	NA	NA	NA	61542103	61630397	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ENSMUSG00000026914.16_61542104_61630444_1	chr2	+	1199	12	FSM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	66	276	0	26	multi-exon	FALSE	canonical	3	1717	junction_5	150.997564426748	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGCTCTGAGTGTATCG	8613	False	NA	20	True	AATAAA	-20	NA	61542103	61630444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ENSMUSG00000026914.16_61542104_61630720_1	chr2	+	1468	12	NNC	ENSMUSG00000026914.16	novel	1541	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	585.544671210891	6156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCGAGGTCTTTTTG	8613	False	NA	31	True	AATAAA	-17	NA	61542103	61630720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595199_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ENSMUSG00000026915.17_37333297_37377091_1	chr2	-	1144	7	NIC	ENSMUSG00000026915.17	novel	2940	19	NA	NA	99439	39943	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCACAACGCGGAAAGTCC	NA	False	NA	NA	False	NA	NA	NA	37377091	37333296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077
ENSMUSG00000026915.17_37342257_37373897_1	chr2	-	1015	6	NIC	ENSMUSG00000026915.17	novel	2940	19	NA	NA	102633	30983	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCCTGCTCACGTGAAGT	770	False	NA	NA	False	NA	NA	NA	37373897	37342256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739
ENSMUSG00000026915.17_37473670_37593871_1	chr2	-	2751	18	NIC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	0	-502	combination_of_known_junctions	FALSE	canonical	3	115	junction_17	145.431799495496	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGTACTGCCTGGTTC	NA	False	NA	-5	True	AATAAA	-15	NA	37593871	37473669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593678
ENSMUSG00000026917.16_27405169_27425323_2	chr2	+	1666	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	0	1224	0	268	multi-exon	FALSE	canonical	3	1324	junction_4	114.959164347413	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCGTGTCAAGTCCCTTT	NA	False	NA	13	True	NA	NA	NA	27405168	27425323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ENSMUSG00000026917.16_27405169_27426547_2	chr2	+	2811	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	408.12498085758	1908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405168	27426547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_27405293_27408719_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ENSMUSG00000026918.17_27338387_27365666_1	chr2	-	2444	12	FSM	ENSMUSG00000026918.17	ENSMUST00000077737.13	5272	12	32	2796	0	-532	multi-exon	FALSE	canonical	3	192	junction_7	30.2258714644446	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGTTTTCTTTTACTTC	NA	False	NA	-16	True	AATATA	-17	NA	27365666	27338386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ENSMUSG00000026921.21_26476673_26482694_1	chr2	+	1068	8	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	112.260811487885	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	203	False	NA	13	True	AATAAA	-13	NA	26476672	26482694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26482129_26482293_26482429
ENSMUSG00000026921.21_26483069_26494254_1	chr2	+	1399	6	NIC	ENSMUSG00000026921.21	novel	1865	10	NA	NA	910	11122	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCACCCGCCGCCCGC	6599	False	NA	NA	False	NA	NA	NA	26483068	26494254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
ENSMUSG00000026922.14_26483069_26493728_1	chr2	-	1240	6	NIC	ENSMUSG00000026922.14	novel	1273	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	216	junction_5	206.37577377202	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTAGAGTTCTTTCTCC	9938	False	NA	1	True	TATAAA	-45	NA	26493728	26483068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26493673
ENSMUSG00000026922.14_26483069_26494254_1	chr2	-	1404	6	NNC	ENSMUSG00000026922.14	novel	1489	6	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	292.487674954006	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTAGAGTTCTTTCTCC	9571	False	NA	1	True	TATAAA	-45	NA	26494254	26483068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494035
ENSMUSG00000026922.14_26484515_26494254_1	chr2	-	970	5	FSM	ENSMUSG00000026922.14	ENSMUST00000140386.8	1145	5	175	0	-31	0	multi-exon	FALSE	canonical	0	0	junction_4	320.696897396903	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACATTGCATCATTTCA	9571	False	NA	NA	False	NA	NA	NA	26494254	26484514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
ENSMUSG00000026926.15_26279360_26285738_1	chr2	+	1730	13	FSM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	9	1396	0	-1396	multi-exon	FALSE	canonical	3	1351	junction_8	105.114619979018	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGTCTTTCAAACAC	653	False	NA	35	True	AATGAA	-20	NA	26279359	26285738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ENSMUSG00000026926.15_26279360_26286193_1	chr2	+	2185	13	FSM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	9	941	0	-941	multi-exon	FALSE	canonical	3	1351	junction_8	105.114619979018	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCCTCACAGTGAGCTT	653	False	NA	25	True	NA	NA	NA	26279359	26286193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ENSMUSG00000026926.15_26279360_26287134_1	chr2	+	2969	14	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	420.408113918512	2169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGATGCCCCTAGGTGT	653	False	NA	19	True	AATAAA	-16	NA	26279359	26287134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430_26286016_26286172
ENSMUSG00000026926.15_26279360_26287134_2	chr2	+	2725	14	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	420.408113918512	1777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGATGCCCCTAGGTGT	653	False	NA	19	True	AATAAA	-16	NA	26279359	26287134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430_26286189_26286589
ENSMUSG00000026939.13_25510116_25511988_1	chr2	-	743	5	NIC	ENSMUSG00000026939.13	novel	795	5	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_2	18.9406969248758	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAGCTCTGAAGCAAT	NA	False	NA	-6	True	AATAAA	-18	NA	25511988	25510115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_25510543_25511077_25511186_25511372_25511471_25511619_25511687_25511945
ENSMUSG00000026939.13_25510116_25511988_2	chr2	-	805	5	NNC	ENSMUSG00000026939.13	novel	975	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.0873094266007	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAGCTCTGAAGCAAT	NA	False	NA	-6	True	AATAAA	-18	NA	25511988	25510115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_25510543_25511077_25511186_25511386_25511471_25511619_25511763_25511945
ENSMUSG00000026942.14_25419686_25445759_1	chr2	-	190	2	NNC	ENSMUSG00000026942.14	novel	4117	9	NA	NA	-8807	-10808	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	24975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCACCAGTTCTATGAGA	NA	False	NA	NA	False	NA	NA	NA	25445759	25419685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_25419814_25445697
ENSMUSG00000026958.14_25242299_25246365_1	chr2	-	1672	13	NNC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	80.5231160737227	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAGTAGGATCCATGCAT	9007	False	NA	-14	True	AATAAA	-20	NA	25246365	25242298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246148_25246242
ENSMUSG00000026958.14_25242299_25246365_2	chr2	-	1767	12	ISM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	6	-3	0	0	intron_retention	FALSE	canonical	3	250	junction_10	27.0884684684635	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAGTAGGATCCATGCAT	9007	False	NA	-14	True	AATAAA	-20	NA	25246365	25242298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040
ENSMUSG00000026960.7_53081738_53108457_1	chr2	+	1493	4	FSM	ENSMUSG00000026960.7	ENSMUST00000155517.2	582	4	0	-911	0	-775	multi-exon	FALSE	canonical	3	23	junction_1	228.30583776057	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAAGGGTTCTTGTTGTT	NA	False	NA	10	True	AATATA	-22	NA	53081737	53108457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_53081893_53084295_53084350_53092930_53093064_53107306
ENSMUSG00000026960.7_53082100_53108457_2	chr2	+	1773	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	0	775	0	-775	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAAGGGTTCTTGTTGTT	NA	False	NA	10	True	AATATA	-22	NA	53082099	53108457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ENSMUSG00000026965.13_25162490_25175618_1	chr2	+	2695	13	FSM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	0	309	0	-309	multi-exon	TRUE	canonical	3	410	junction_2	48.8355374929182	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGTATTTTGTTGGA	NA	False	NA	29	True	ATTAAA	-16	NA	25162489	25175618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ENSMUSG00000026969.4_25112172_25114669_1	chr2	+	1546	4	NNC	ENSMUSG00000026969.4	novel	254	2	NA	NA	802	2377	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	11674	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCGACGCTCTGCCAAC	NA	False	NA	NA	False	NA	NA	NA	25112171	25114669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_25113381_25113952_25114057_25114135_25114245_25114545
ENSMUSG00000026969.4_25112172_25114669_2	chr2	+	1553	4	NIC	ENSMUSG00000026969.4	novel	254	2	NA	NA	802	2377	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	11784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCGACGCTCTGCCAAC	NA	False	NA	NA	False	NA	NA	NA	25112171	25114669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_25113381_25113945_25114057_25114135_25114245_25114545
ENSMUSG00000026969.4_25112172_25114669_3	chr2	+	804	5	NNC	ENSMUSG00000026969.4	novel	1125	7	NA	NA	802	2377	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCGACGCTCTGCCAAC	NA	False	NA	NA	False	NA	NA	NA	25112171	25114669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_25112530_25113278_25113381_25113945_25114057_25114135_25114245_25114545
ENSMUSG00000026969.4_25112172_25114669_4	chr2	+	1545	4	NNC	ENSMUSG00000026969.4	novel	254	2	NA	NA	802	2377	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	11593	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCGACGCTCTGCCAAC	NA	False	NA	NA	False	NA	NA	NA	25112171	25114669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_25113381_25113945_25114049_25114135_25114245_25114545
ENSMUSG00000026987.17_59799003_59881011_1	chr2	-	1228	7	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	10016	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_4	34.7407061912487	112	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTGACCAGTGAATTG	1573	False	NA	NA	False	AATAAA	-20	NA	59881011	59799002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
ENSMUSG00000026999.15_80469176_80489026_1	chr2	+	1323	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	16	220	0	-220	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTCACTGGCTTTCA	NA	False	NA	15	True	ATTAAA	-15	NA	80469175	80489026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ENSMUSG00000026999.15_80469176_80489458_1	chr2	+	1755	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	16	-212	0	208	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAGTTTGTTAATATG	NA	False	NA	NA	False	AATAAA	-16	NA	80469175	80489458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ENSMUSG00000027001.11_80447580_80461533_2	chr2	+	647	4	FSM	ENSMUSG00000027001.11	ENSMUST00000147290.8	1324	4	136	541	5	365	multi-exon	FALSE	canonical	3	18	junction_1	41.0446910899164	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTTGTTATTTCAG	NA	False	NA	4	True	AATACA	-14	NA	80447579	80461533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_80447629_80451537_80451585_80454551_80454705_80461135
ENSMUSG00000027001.11_80447580_80461533_3	chr2	+	851	4	FSM	ENSMUSG00000027001.11	ENSMUST00000151204.2	1993	4	-30	1172	5	365	multi-exon	FALSE	canonical	3	15	junction_2	40.1441845795323	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTTGTTATTTCAG	NA	False	NA	4	True	AATACA	-14	NA	80447579	80461533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_80447951_80451537_80451585_80454669_80454705_80461135
ENSMUSG00000027001.11_80447580_80461533_4	chr2	+	969	4	FSM	ENSMUSG00000027001.11	ENSMUST00000028384.5	1632	4	191	472	5	365	multi-exon	FALSE	canonical	3	97	junction_1	4.10960933531265	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTTGTTATTTCAG	NA	False	NA	4	True	AATACA	-14	NA	80447579	80461533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_80447951_80451537_80451585_80454551_80454705_80461135
ENSMUSG00000027006.14_80146055_80183762_1	chr2	+	3172	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	245	625	245	-625	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACTACTGTATAGACAGA	NA	False	NA	6	True	AATAAA	-22	NA	80146054	80183762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ENSMUSG00000027006.14_80146055_80183976_1	chr2	+	3386	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	245	411	245	-411	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTGTTGGTTTTGTTT	NA	False	NA	9	True	CATAAA	-13	NA	80146054	80183976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ENSMUSG00000027006.14_80146055_80184391_1	chr2	+	3801	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	245	-4	245	4	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGAAGATGATTGTT	NA	False	NA	16	True	AATAAA	-22	NA	80146054	80184391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ENSMUSG00000027010.17_71105034_71164438_1	chr2	-	2448	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5254	0	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_15	34.4382940017359	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTCAGTTTGTTTTCC	NA	False	NA	48	True	NA	NA	NA	71164438	71105033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71164384
ENSMUSG00000027010.17_71160084_71197887_1	chr2	-	635	5	NIC	ENSMUSG00000027010.17	novel	550	3	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	8.57321409974112	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCTCTAGAATTTCTA	NA	False	NA	NA	False	AATAAA	-17	NA	71197887	71160083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_71160375_71163948_71164065_71174233_71174377_71196870_71196925_71197856
ENSMUSG00000027018.12_71219604_71271859_1	chr2	+	1461	11	NNC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	0	-107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	664.361535611447	9078	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCCCACTGCTTTCTT	5118	False	NA	17	True	AATAAA	-18	NA	71219603	71271859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_71219649_71220254_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ENSMUSG00000027018.12_71219604_71271859_2	chr2	+	1289	10	NIC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	0	-107	combination_of_known_splicesites	FALSE	canonical	3	214	junction_4	625.456277892832	1202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCCCACTGCTTTCTT	5118	False	NA	17	True	AATAAA	-18	NA	71219603	71271859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ENSMUSG00000027067.17_84867578_84877453_2	chr2	+	3024	16	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1260	junction_6	144.857569893864	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867577	84877453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ENSMUSG00000027067.17_84867578_84877453_4	chr2	+	2724	17	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	392.719638984034	1336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867577	84877453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_84867673_84868137_84868299_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ENSMUSG00000027067.17_84867578_84877453_5	chr2	+	2733	17	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_13	400.187295017908	2239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867577	84877453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875759_84875925_84876027_84876117_84876596_84876784_84876989
ENSMUSG00000027071.15_84867578_84877062_1	chr2	-	2348	17	NIC	ENSMUSG00000027071.15	novel	1764	13	NA	NA	-9256	-5180	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCTTTTCCCGCGTGCGC	9964	False	NA	NA	False	NA	NA	NA	84877062	84867577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ENSMUSG00000027071.15_84867578_84877453_1	chr2	-	2734	17	NNC	ENSMUSG00000027071.15	novel	1764	13	NA	NA	-9647	-5180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1979	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCTTTTCCCGCGTGCGC	9573	False	NA	NA	False	NA	NA	NA	84877453	84867577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871456_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ENSMUSG00000027071.15_84867578_84877453_2	chr2	-	2757	17	NNC	ENSMUSG00000027071.15	novel	1764	13	NA	NA	-9647	-5180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCTTTTCCCGCGTGCGC	9573	False	NA	NA	False	NA	NA	NA	84877453	84867577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_84867673_84868119_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ENSMUSG00000027071.15_84867799_84877453_1	chr2	-	2983	16	NIC	ENSMUSG00000027071.15	novel	1764	13	NA	NA	-9647	-5401	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCTTCTTTTAAAATGG	9573	False	NA	NA	False	NA	NA	NA	84877453	84867798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ENSMUSG00000027075.17_84669761_84693557_1	chr2	+	2157	15	FSM	ENSMUSG00000027075.17	ENSMUST00000028469.14	2539	15	9	373	0	-365	multi-exon	FALSE	canonical	3	43	junction_1	14.9196829314671	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGCCCTTAAAAAAC	NA	False	NA	NA	False	AAAAAG	-29	NA	84669760	84693557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ENSMUSG00000027075.17_84669761_84693557_2	chr2	+	1981	15	NIC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	0	-365	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	18.8209880674936	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGCCCTTAAAAAAC	NA	False	NA	NA	False	AAAAAG	-29	NA	84669760	84693557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_84669850_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ENSMUSG00000027075.17_84669761_84693925_1	chr2	+	2349	15	NIC	ENSMUSG00000027075.17	novel	2539	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	18.8209880674936	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTGGTGTGTATCTGT	NA	False	NA	12	True	AATAAA	-14	NA	84669760	84693925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_84669850_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ENSMUSG00000027075.17_84670697_84693925_1	chr2	+	2402	15	FSM	ENSMUSG00000027075.17	ENSMUST00000111624.8	2556	15	154	0	154	0	multi-exon	FALSE	canonical	3	14	junction_1	20.7551321413303	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTGGTGTGTATCTGT	461	False	NA	12	True	AATAAA	-14	NA	84670696	84693925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_84670839_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ENSMUSG00000027076.11_84657341_84660457_1	chr2	+	590	3	FSM	ENSMUSG00000027076.11	ENSMUST00000028470.10	690	3	0	100	0	0	multi-exon	FALSE	canonical	3	373	junction_1	17.5	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTAGAGCTCTCCTGGCT	6417	False	NA	-90	True	NA	NA	NA	84657340	84660457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_84657492_84657942_84658058_84660133
ENSMUSG00000027077.8_84641520_84646605_1	chr2	-	905	5	NNC	ENSMUSG00000027077.8	novel	1761	8	NA	NA	6391	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	56.9078202007422	621	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTGGCAGTTTGCC	4160	False	NA	-19	True	AATAAA	-19	NA	84646605	84641519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227_84646384_84646487
ENSMUSG00000027077.8_84641520_84646605_2	chr2	-	1009	4	ISM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	6391	0	6391	0	3prime_fragment	FALSE	canonical	3	109	junction_3	14.8996644257513	826	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTGGCAGTTTGCC	4160	False	NA	-19	True	AATAAA	-19	NA	84646605	84641519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227
ENSMUSG00000027078.15_84629178_84640347_1	chr2	+	1381	4	FSM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	6	173	0	-173	multi-exon	FALSE	canonical	3	170	junction_3	17.1075032271418	11664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTCTCGTGGGTGAT	NA	False	NA	NA	False	NA	NA	NA	84629177	84640347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348
ENSMUSG00000027078.15_84629178_84640347_2	chr2	+	427	4	NNC	ENSMUSG00000027078.15	novel	343	4	NA	NA	0	-173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	96.5482032746107	9998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTCTCGTGGGTGAT	NA	False	NA	NA	False	NA	NA	NA	84629177	84640347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_84629277_84633122_84633219_84636680_84636769_84640203
ENSMUSG00000027078.15_84629178_84640347_3	chr2	+	797	5	NNC	ENSMUSG00000027078.15	novel	1560	4	NA	NA	0	-173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	84.8745397631115	9934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTCTCGTGGGTGAT	NA	False	NA	NA	False	NA	NA	NA	84629177	84640347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348_84639620_84640203
ENSMUSG00000027079.16_84553103_84557631_1	chr2	-	2212	3	FSM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	63	-363	-11	363	multi-exon	FALSE	canonical	3	238	junction_1	30.5	47869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTGTGAGCCAATCACA	NA	False	NA	NA	False	NA	NA	NA	84557631	84553102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_84554562_84555872_84556501_84557506
ENSMUSG00000027080.7_84508746_84518406_1	chr2	+	1906	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	0	153	0	-153	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGGTTTCTCTTTTGA	3357	False	NA	11	True	AATAAA	-13	NA	84508745	84518406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
ENSMUSG00000027082.16_84263204_84307107_1	chr2	-	1333	9	NIC	ENSMUSG00000027082.16	novel	1492	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_8	41.6863286941894	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATCATGTTGACTGTCC	NA	False	NA	-7	True	AATAAA	-14	NA	84307107	84263203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307034
ENSMUSG00000027082.16_84263204_84307107_2	chr2	-	1283	9	NIC	ENSMUSG00000027082.16	novel	1492	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	40.1230529122598	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATCATGTTGACTGTCC	NA	False	NA	-7	True	AATAAA	-14	NA	84307107	84263203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307084
ENSMUSG00000027082.16_84263395_84307107_1	chr2	-	1092	9	NIC	ENSMUSG00000027082.16	novel	1492	9	NA	NA	0	-191	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	40.1230529122598	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTATACGGTGCTTCT	NA	False	NA	NA	False	ATTAAA	-23	NA	84307107	84263394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307084
ENSMUSG00000027086.17_69517159_69543860_1	chr2	-	3775	14	FSM	ENSMUSG00000027086.17	ENSMUST00000073152.13	2865	14	-910	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	59.5439273976854	468	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATGGCCCACCATATA	7055	False	NA	NA	False	NA	NA	NA	69543860	69517158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470
ENSMUSG00000027088.11_69620004_69626582_1	chr2	+	1251	4	FSM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	24	985	0	585	multi-exon	FALSE	canonical	3	95	junction_2	4.49691252107735	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGGTGTATTAGTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	69620003	69626582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_69620301_69620629_69620666_69622680_69622836_69625819
ENSMUSG00000027091.15_83474881_83494583_1	chr2	+	1626	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	102	383	0	-383	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTCGTTGTAACTG	NA	False	NA	NA	False	ATTAAA	-17	NA	83474880	83494583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ENSMUSG00000027091.15_83474881_83494966_1	chr2	+	2009	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	102	0	0	0	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGGCCTTTTTCTTTTA	NA	False	NA	28	True	AATAAA	-36	NA	83474880	83494966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ENSMUSG00000027104.19_73648938_73722946_1	chr2	-	2115	14	FSM	ENSMUSG00000027104.19	ENSMUST00000112017.8	2396	14	-47	328	-8	228	multi-exon	FALSE	canonical	3	231	junction_5	32.1212569481487	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCTTCCCACTTCCATT	NA	False	NA	NA	False	AATAAA	-17	NA	73722946	73648937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ENSMUSG00000027108.16_72923544_73044707_1	chr2	-	1692	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	84	399	-30	0	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	3594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGTTTGGGGA	NA	False	NA	-3	True	AATAAA	-16	NA	73044707	72923543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ENSMUSG00000027108.16_72923951_73044707_1	chr2	-	1285	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	84	806	-30	-405	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCGACGTACAACTTCTAA	NA	False	NA	-7	True	AATAAA	-16	NA	73044707	72923950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ENSMUSG00000027109.17_72766771_72800817_1	chr2	-	2665	4	ISM	ENSMUSG00000027109.17	ENSMUST00000133615.2	3870	5	8813	-225	-7	0	3prime_fragment	FALSE	canonical	3	407	junction_3	18.3545331972483	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTGAAAAAGTCTAATTT	NA	False	NA	-12	True	ATTAAA	-25	NA	72800817	72766770	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498
ENSMUSG00000027122.16_106792872_106804742_1	chr2	-	3861	4	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	182	junction_3	33.9247533357118	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGACTTACTGTTTATTA	NA	False	NA	NA	False	AATAAA	-19	NA	106804742	106792871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804616
ENSMUSG00000027122.16_106794541_106804742_1	chr2	-	1641	5	FSM	ENSMUSG00000027122.16	ENSMUST00000028536.13	3337	5	27	1669	0	233	multi-exon	FALSE	canonical	3	150	junction_1	43.6863823176056	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGATACTTAAGTGCTAAA	NA	False	NA	NA	False	NA	NA	NA	106804742	106794540	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804616
ENSMUSG00000027122.16_106794774_106804742_1	chr2	-	1959	4	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	182	junction_3	33.9247533357118	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACATAAACTTTAATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	106804742	106794773	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804616
ENSMUSG00000027122.16_106794774_106804742_2	chr2	-	1408	5	FSM	ENSMUSG00000027122.16	ENSMUST00000028536.13	3337	5	27	1902	0	0	multi-exon	FALSE	canonical	3	150	junction_1	43.6863823176056	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACATAAACTTTAATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	106804742	106794773	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804616
ENSMUSG00000027130.16_112193356_112198365_1	chr2	+	967	5	NNC	ENSMUSG00000027130.16	novel	4464	4	NA	NA	6816	4857	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1789	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGCATAATTGAACGTCAC	NA	False	NA	NA	False	NA	NA	NA	112193355	112198365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_112193700_112194136_112194298_112194496_112194651_112197746_112197853_112198163
ENSMUSG00000027130.16_112193356_112198365_2	chr2	+	906	5	NNC	ENSMUSG00000027130.16	novel	4464	4	NA	NA	6816	4857	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	602	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGCATAATTGAACGTCAC	NA	False	NA	NA	False	NA	NA	NA	112193355	112198365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_112193700_112194136_112194298_112194496_112194581_112197746_112197862_112198163
ENSMUSG00000027130.16_112193356_112198365_3	chr2	+	914	5	NNC	ENSMUSG00000027130.16	novel	4464	4	NA	NA	6816	4857	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	433	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGCATAATTGAACGTCAC	NA	False	NA	NA	False	NA	NA	NA	112193355	112198365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_112193700_112194136_112194298_112194496_112194581_112197738_112197862_112198163
ENSMUSG00000027131.4_112193356_112198365_1	chr2	-	967	5	NNC	ENSMUSG00000027131.4	novel	983	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	361.017572287001	1837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAAGTTCCCCTTCAGT	5004	False	NA	-5	True	AATAAA	-29	NA	112198365	112193355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_112193700_112194136_112194298_112194496_112194651_112197755_112197862_112198163
ENSMUSG00000027132.4_112209571_112243271_1	chr2	+	1557	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	15	1314	0	-1314	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTACAAATGCCTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	112209570	112243271	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ENSMUSG00000027132.4_112209571_112243680_1	chr2	+	1966	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	15	905	0	-905	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGCTTTTTTAATTCT	NA	False	NA	NA	False	AGTAAA	-18	NA	112209570	112243680	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ENSMUSG00000027133.4_112092271_112093011_1	chr2	+	407	2	NNC	ENSMUSG00000027133.4	novel	1109	2	NA	NA	0	-603	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATTTTGTGTGTTGTTG	NA	False	NA	24	True	ATTAAA	-18	NA	112092270	112093011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_112092387_112092720
ENSMUSG00000027133.4_112092271_112093011_10	chr2	+	423	2	NNC	ENSMUSG00000027133.4	novel	1109	2	NA	NA	0	-603	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATTTTGTGTGTTGTTG	NA	False	NA	24	True	ATTAAA	-18	NA	112092270	112093011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_112092340_112092657
ENSMUSG00000027133.4_112092271_112093011_11	chr2	+	491	2	NNC	ENSMUSG00000027133.4	novel	1109	2	NA	NA	0	-603	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	13086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATTTTGTGTGTTGTTG	NA	False	NA	24	True	ATTAAA	-18	NA	112092270	112093011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_112092417_112092666
ENSMUSG00000027133.4_112092271_112093011_12	chr2	+	506	2	FSM	ENSMUSG00000027133.4	ENSMUST00000028553.4	1109	2	0	603	0	-603	multi-exon	FALSE	canonical	3	3938	junction_1	0	19610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATTTTGTGTGTTGTTG	NA	False	NA	24	True	ATTAAA	-18	NA	112092270	112093011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_112092423_112092657
ENSMUSG00000027133.4_112092271_112093011_2	chr2	+	475	3	NNC	ENSMUSG00000027133.4	novel	1109	2	NA	NA	0	-603	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1969	1469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATTTTGTGTGTTGTTG	NA	False	NA	24	True	ATTAAA	-18	NA	112092270	112093011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_112092423_112092657_112092726_112092756
ENSMUSG00000027133.4_112092271_112093011_3	chr2	+	502	2	NNC	ENSMUSG00000027133.4	novel	1109	2	NA	NA	0	-603	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	16939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATTTTGTGTGTTGTTG	NA	False	NA	24	True	ATTAAA	-18	NA	112092270	112093011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_112092423_112092661
ENSMUSG00000027133.4_112092271_112093011_4	chr2	+	448	2	NNC	ENSMUSG00000027133.4	novel	1109	2	NA	NA	0	-603	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_1	0	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATTTTGTGTGTTGTTG	NA	False	NA	24	True	ATTAAA	-18	NA	112092270	112093011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_112092423_112092715
ENSMUSG00000027133.4_112092271_112093011_5	chr2	+	395	2	NNC	ENSMUSG00000027133.4	novel	1109	2	NA	NA	0	-603	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATTTTGTGTGTTGTTG	NA	False	NA	24	True	ATTAAA	-18	NA	112092270	112093011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_112092375_112092720
ENSMUSG00000027133.4_112092271_112093011_6	chr2	+	482	2	NNC	ENSMUSG00000027133.4	novel	1109	2	NA	NA	0	-603	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	938	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATTTTGTGTGTTGTTG	NA	False	NA	24	True	ATTAAA	-18	NA	112092270	112093011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_112092423_112092681
ENSMUSG00000027133.4_112092271_112093011_7	chr2	+	443	3	NNC	ENSMUSG00000027133.4	novel	1109	2	NA	NA	0	-603	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1969	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATTTTGTGTGTTGTTG	NA	False	NA	24	True	ATTAAA	-18	NA	112092270	112093011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_112092423_112092657_112092814_112092876
ENSMUSG00000027160.17_109848162_109875009_1	chr2	+	1413	6	NNC	ENSMUSG00000027160.17	novel	2070	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	196.317497946566	1000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTACTCTGTTATT	NA	False	NA	33	True	AATAAA	-19	NA	109848161	109875009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_109848560_109852226_109852360_109862676_109862785_109870923_109871078_109871605_109871748_109874531
ENSMUSG00000027160.17_109848162_109875194_1	chr2	+	1598	6	NNC	ENSMUSG00000027160.17	novel	2070	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	196.317497946566	1284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTGCATTTATTTAT	NA	False	NA	NA	False	AGTAAA	-28	NA	109848161	109875194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_109848560_109852226_109852360_109862676_109862785_109870923_109871078_109871605_109871748_109874531
ENSMUSG00000027162.8_109721198_109728066_1	chr2	+	946	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	0	3282	0	983	multi-exon	FALSE	canonical	3	354	junction_4	22.349496638627	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTTTTAAAAAGAGGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	109721197	109728066	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
ENSMUSG00000027162.8_109721198_109731142_1	chr2	+	4022	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	0	206	0	-206	multi-exon	FALSE	canonical	3	354	junction_4	22.349496638627	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTGTATGAGTCGTGC	NA	False	NA	29	True	ATTAAA	-26	NA	109721197	109731142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
ENSMUSG00000027163.14_101716598_101731991_1	chr2	+	1184	5	NNC	ENSMUSG00000027163.14	novel	1191	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.5467600870597	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTGGTCGTGGTTCTT	NA	False	NA	29	True	AATAAA	-25	NA	101716597	101731991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_101716665_101725479_101725606_101727384_101727525_101730185_101730318_101731272
ENSMUSG00000027167.12_105532784_105734847_1	chr2	-	1574	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	62	1412	-19	-1412	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTGCCTTAGAGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	105734847	105532783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ENSMUSG00000027167.12_105532933_105734847_1	chr2	-	1425	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	62	1561	-19	-1561	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTTGTTTCATGATT	NA	False	NA	-22	True	AATACA	-30	NA	105734847	105532932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ENSMUSG00000027170.13_104830001_104847388_1	chr2	-	1240	11	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	687.70650716712	1297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	2677	False	NA	-16	True	AGTAAA	-17	NA	104847388	104830000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843661_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000027170.13_104830001_104847388_2	chr2	-	1230	11	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	687.172678444072	1973	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	2677	False	NA	-16	True	AGTAAA	-17	NA	104847388	104830000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845232_104847290
ENSMUSG00000027170.13_104830001_104847388_3	chr2	-	1243	11	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	690.180237329352	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	2677	False	NA	-16	True	AGTAAA	-17	NA	104847388	104830000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_104830187_104830586_104830648_104831615_104831746_104835258_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000027170.13_104830001_104847388_4	chr2	-	1244	11	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	687.988408332582	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	2677	False	NA	-16	True	AGTAAA	-17	NA	104847388	104830000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843661_104844085_104844229_104845114_104845248_104847290
ENSMUSG00000027170.13_104830001_104847388_5	chr2	-	1162	10	NIC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	98	junction_5	647.355494147125	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	2677	False	NA	-16	True	AGTAAA	-17	NA	104847388	104830000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000027170.13_104830001_104847388_6	chr2	-	1245	11	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	678.251103943075	4539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	2677	False	NA	-16	True	AGTAAA	-17	NA	104847388	104830000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843286_104843538_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000027170.13_104830001_104847425_1	chr2	-	1277	11	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	684.2597752316	4064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	2640	False	NA	-16	True	AGTAAA	-17	NA	104847425	104830000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_104830181_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000027170.13_104830001_104847425_2	chr2	-	1269	11	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	690.180237329352	1026	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	2640	False	NA	-16	True	AGTAAA	-17	NA	104847425	104830000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_104830187_104830586_104830648_104831615_104831746_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000027170.13_104830001_104847425_3	chr2	-	1278	11	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	678.251103943075	3774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	2640	False	NA	-16	True	AGTAAA	-17	NA	104847425	104830000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843286_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000027170.13_104830001_104847425_4	chr2	-	1269	11	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	657.305225903461	937	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	2640	False	NA	-16	True	AGTAAA	-17	NA	104847425	104830000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837114_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000027170.13_104830001_104847425_5	chr2	-	1284	11	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	691.711095761807	2846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	2640	False	NA	-16	True	AGTAAA	-17	NA	104847425	104830000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_104830187_104830586_104830641_104831607_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000027176.9_104420868_104439774_1	chr2	+	739	2	FSM	ENSMUSG00000027176.9	ENSMUST00000137961.2	644	2	-95	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	0	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTGCTTTAGCCTTTT	6900	False	NA	4	True	ATTAAA	-16	NA	104420867	104439774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_104421048_104439215
ENSMUSG00000027176.9_104420868_104439774_2	chr2	+	621	3	FSM	ENSMUSG00000027176.9	ENSMUST00000122900.2	2589	3	-9	1977	0	0	multi-exon	FALSE	canonical	3	327	junction_1	20.5	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTGCTTTAGCCTTTT	6900	False	NA	4	True	ATTAAA	-16	NA	104420867	104439774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_104421048_104439215_104439318_104439435
ENSMUSG00000027180.13_103858205_103887182_1	chr2	+	2079	11	NIC	ENSMUSG00000027180.13	novel	3720	10	NA	NA	0	-653	combination_of_known_junctions	FALSE	canonical	3	77	junction_10	96.8347045227072	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGAAGAATTTCTATATC	NA	False	NA	NA	False	NA	NA	NA	103858204	103887182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103886345
ENSMUSG00000027180.13_103858205_103887182_2	chr2	+	3053	10	FSM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	0	667	0	-653	multi-exon	FALSE	canonical	3	344	junction_6	33.1058907144937	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGAAGAATTTCTATATC	NA	False	NA	NA	False	NA	NA	NA	103858204	103887182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
ENSMUSG00000027180.13_103858205_103887840_1	chr2	+	2737	11	NIC	ENSMUSG00000027180.13	novel	3720	10	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	77	junction_10	96.8347045227072	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTCAACTGTATTTATT	NA	False	NA	5	True	NA	NA	NA	103858204	103887840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103886345
ENSMUSG00000027180.13_103858205_103891357_1	chr2	+	2373	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	139	2228	0	-1991	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTAAGTGCCTATT	NA	False	NA	39	True	AATGAA	-37	NA	103858204	103891357	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ENSMUSG00000027180.13_103858205_103891752_1	chr2	+	2768	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	139	1833	0	-1596	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACACAGTCTACTGCTAAA	NA	False	NA	38	True	ATTAAA	-34	NA	103858204	103891752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ENSMUSG00000027184.15_103595363_103627366_1	chr2	-	3959	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_9	440.218520760725	1933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTCATGTGTGGTTAT	NA	False	NA	-11	True	AATAAA	-17	NA	103627366	103595362	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605844_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ENSMUSG00000027184.15_103597452_103627366_1	chr2	-	3439	17	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	83	2089	-48	0	5prime_fragment	FALSE	canonical	3	1726	junction_3	108.266742354243	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	NA	False	NA	-9	True	NA	NA	NA	103627366	103597451	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ENSMUSG00000027184.15_103597452_103627449_1	chr2	-	3522	17	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	0	2089	0	0	5prime_fragment	FALSE	canonical	3	1726	junction_3	108.266742354243	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	NA	False	NA	-9	True	NA	NA	NA	103627449	103597451	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ENSMUSG00000027185.16_103552233_103591429_1	chr2	-	3061	29	FSM	ENSMUSG00000027185.16	ENSMUST00000028608.13	3879	29	186	632	111	-227	multi-exon	FALSE	canonical	3	271	junction_25	29.5459474413003	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGCAAGAAGTTGAAGAAG	NA	False	NA	-29	True	AAGAAA	-32	NA	103591429	103552232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ENSMUSG00000027185.16_103552233_103591566_1	chr2	-	3198	29	FSM	ENSMUSG00000027185.16	ENSMUST00000028608.13	3879	29	49	632	-17	-227	multi-exon	FALSE	canonical	3	271	junction_25	29.5459474413003	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGCAAGAAGTTGAAGAAG	NA	False	NA	-29	True	AAGAAA	-32	NA	103591566	103552232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ENSMUSG00000027187.11_103284347_103315470_1	chr2	-	2425	13	FSM	ENSMUSG00000027187.11	ENSMUST00000028610.10	2613	13	35	153	0	-153	multi-exon	FALSE	canonical	3	472	junction_10	47.7368364636321	1723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCGTGTTTGGTTGCTTT	NA	False	NA	-8	True	AATAAA	-16	NA	103315470	103284346	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
ENSMUSG00000027187.11_103284940_103315470_1	chr2	-	1832	13	FSM	ENSMUSG00000027187.11	ENSMUST00000028610.10	2613	13	35	746	0	0	multi-exon	FALSE	canonical	3	472	junction_10	47.7368364636321	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCGTTTCCTGAAGGG	NA	False	NA	NA	False	TTTAAA	-42	NA	103315470	103284939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
ENSMUSG00000027193.13_94242027_94268481_1	chr2	-	3741	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	565	junction_1	211.688282609319	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATATTAGCATTTATT	NA	False	NA	44	True	NA	NA	NA	94268481	94242026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_94244132_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ENSMUSG00000027193.13_94243849_94268481_1	chr2	-	1914	14	FSM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	0	1822	0	-1822	multi-exon	FALSE	canonical	3	777	junction_1	163.356364354585	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTCTGCAGCCTTGA	NA	False	NA	-7	True	NA	NA	NA	94268481	94243848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ENSMUSG00000027193.13_94243849_94268481_2	chr2	-	1919	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	0	-1822	at_least_one_novel_splicesite	FALSE	canonical	3	565	junction_1	211.688282609319	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTCTGCAGCCTTGA	NA	False	NA	-7	True	NA	NA	NA	94268481	94243848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_94244132_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ENSMUSG00000027195.11_93863034_93988254_1	chr2	-	1493	12	NNC	ENSMUSG00000027195.11	novel	1902	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	213.059297996614	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTTTTGATAGTGGAA	NA	False	NA	NA	False	AATAAA	-31	NA	93988254	93863033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_93863282_93863635_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
ENSMUSG00000027201.17_124929662_124937946_1	chr2	-	1463	3	ISM	ENSMUSG00000027201.17	ENSMUST00000089825.13	1631	15	20847	-1092	-7015	0	3prime_fragment	FALSE	canonical	3	668	junction_1	10	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124937946	124929661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_124930958_124937627_124937680_124937831
ENSMUSG00000027203.16_125089637_125099668_1	chr2	+	855	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	235	860	-183	0	multi-exon	TRUE	canonical	3	2160	junction_3	102.069780052668	16231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACTGGAGAACATGGAGG	NA	False	NA	32	True	AATAAA	-33	NA	125089636	125099668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ENSMUSG00000027203.16_125089637_125100392_1	chr2	+	1579	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	235	136	-183	-136	multi-exon	FALSE	canonical	3	2160	junction_3	102.069780052668	16535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATAAAGTATCTTTGT	NA	False	NA	-19	True	AAGAAA	-27	NA	125089636	125100392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ENSMUSG00000027206.14_125672373_125700916_1	chr2	-	3100	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	143	149	0	-149	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTATTTTCTTCTAT	NA	False	NA	77	True	AATAAA	-21	NA	125700916	125672372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ENSMUSG00000027206.14_125672373_125700916_2	chr2	-	3079	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	143	-1149	0	-149	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTATTTTCTTCTAT	NA	False	NA	77	True	AATAAA	-21	NA	125700916	125672372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ENSMUSG00000027206.14_125672969_125700916_1	chr2	-	2504	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	143	745	0	550	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATACCTAAATTTAGAT	NA	False	NA	NA	False	NA	NA	NA	125700916	125672968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ENSMUSG00000027206.14_125673519_125700916_1	chr2	-	1933	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	143	-3	0	0	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTCTTGATGTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	125700916	125673518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ENSMUSG00000027206.14_125673519_125700916_2	chr2	-	1954	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	143	1295	0	0	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTCTTGATGTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	125700916	125673518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ENSMUSG00000027206.14_125673637_125700916_1	chr2	-	1815	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	143	115	0	-115	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCCGTCTATTTCTGT	NA	False	NA	-9	True	TATAAA	-44	NA	125700916	125673636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ENSMUSG00000027207.16_125708188_125825507_1	chr2	+	1767	10	FSM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	161	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	15.4040238449986	501	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTGCTCTTGAATG	NA	False	NA	8	True	ATTAAA	-15	NA	125708187	125825507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_125708306_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
ENSMUSG00000027209.18_125701029_125825507_1	chr2	-	1918	10	Fusion	ENSMUSG00000027209.18_ENSMUSG00000027206.14	novel	3392	13	NA	NA	-124448	-9352	multi-exon	FALSE	non_canonical	0	0	junction_1	0	366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCTCCTGGAGAGACCG	5840	False	NA	NA	False	AGTAAA	-41	NA	125825507	125701028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_-_125701298_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
ENSMUSG00000027209.18_125708188_125825507_1	chr2	-	1750	10	NIC	ENSMUSG00000027209.18	novel	1858	17	NA	NA	162664	117215	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	483	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGAATGGCTTTCTTCCG	5840	False	NA	NA	False	ATTAAA	-4	NA	125825507	125708187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_125708289_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
ENSMUSG00000027217.14_93033561_93164835_1	chr2	-	2298	10	FSM	ENSMUSG00000027217.14	ENSMUST00000111265.9	3751	10	-3	1456	-3	1031	multi-exon	FALSE	canonical	3	49	junction_2	5.53774924194538	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACAAACACCCCAGACT	NA	False	NA	NA	False	NA	NA	NA	93164835	93033560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
ENSMUSG00000027222.15_92205651_92211562_1	chr2	+	1073	11	NNC	ENSMUSG00000027222.15	novel	1392	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	69.3025252065175	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGGCTCTGTGTCATC	NA	False	NA	21	True	AATAAA	-21	NA	92205650	92211562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_92205702_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
ENSMUSG00000027222.15_92205838_92211562_1	chr2	+	1205	11	FSM	ENSMUSG00000027222.15	ENSMUST00000028650.9	1392	11	187	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	17.2869893272368	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGGCTCTGTGTCATC	NA	False	NA	21	True	AATAAA	-21	NA	92205837	92211562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
ENSMUSG00000027227.8_122065230_122094817_1	chr2	+	1348	9	FSM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	0	1004	0	-1004	multi-exon	FALSE	canonical	3	111	junction_3	10.5763592507063	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGTGGGCATGCCTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	122065229	122094817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_122065440_122076962_122076997_122079279_122079445_122083667_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
ENSMUSG00000027229.6_122016753_122035752_2	chr2	+	787	5	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	0	310	combination_of_known_splicesites	FALSE	canonical	3	63	junction_2	27.6450718935582	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAACTGTAAATGTTTAT	1945	False	NA	NA	False	AATAAA	-14	NA	122016752	122035752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_122016834_122016944_122017027_122023712_122023787_122028866_122028956_122035291
ENSMUSG00000027229.6_122016753_122036882_2	chr2	+	1917	5	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	3	63	junction_2	27.6450718935582	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTCAAAGTGATTATA	1945	False	NA	NA	False	AATAAA	-19	NA	122016752	122036882	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_122016834_122016944_122017027_122023712_122023787_122028866_122028956_122035291
ENSMUSG00000027239.15_91760173_91762079_1	chr2	-	722	5	NNC	ENSMUSG00000027239.15	novel	773	5	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_1	1019.83684356862	3858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762079	91760172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_91760456_91761162_91761325_91761440_91761600_91761716_91761794_91762038
ENSMUSG00000027239.15_91760173_91762079_10	chr2	-	882	5	NNC	ENSMUSG00000027239.15	novel	773	5	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_3	1224.54468579142	2040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762079	91760172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_91760461_91761162_91761325_91761440_91761595_91761716_91761794_91761878
ENSMUSG00000027239.15_91760173_91762079_11	chr2	-	876	5	NNC	ENSMUSG00000027239.15	novel	773	5	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1277.57453305081	1785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762079	91760172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_91760461_91761162_91761325_91761440_91761589_91761716_91761794_91761878
ENSMUSG00000027239.15_91760173_91762079_2	chr2	-	789	5	NNC	ENSMUSG00000027239.15	novel	771	5	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_4	1319.28522314168	1005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762079	91760172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_91760461_91761162_91761325_91761440_91761595_91761716_91761794_91761971
ENSMUSG00000027239.15_91760173_91762079_3	chr2	-	716	5	NNC	ENSMUSG00000027239.15	novel	773	5	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1138.49604742397	2270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762079	91760172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_91760461_91761162_91761325_91761440_91761589_91761716_91761794_91762038
ENSMUSG00000027239.15_91760173_91762079_4	chr2	-	722	5	NNC	ENSMUSG00000027239.15	novel	773	5	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_3	1066.58860391437	4169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762079	91760172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_91760461_91761162_91761325_91761440_91761595_91761716_91761794_91762038
ENSMUSG00000027239.15_91760173_91762079_5	chr2	-	526	5	NNC	ENSMUSG00000027239.15	novel	773	5	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1145.1083736922	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762079	91760172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_91760351_91761251_91761325_91761440_91761598_91761716_91761794_91762038
ENSMUSG00000027239.15_91760173_91762079_6	chr2	-	664	6	NNC	ENSMUSG00000027239.15	novel	773	5	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1035.91246734461	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762079	91760172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_91760461_91761162_91761325_91761440_91761472_91761534_91761600_91761716_91761794_91762038
ENSMUSG00000027239.15_91760173_91762079_7	chr2	-	719	5	NNC	ENSMUSG00000027239.15	novel	773	5	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1148.26420631316	2901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762079	91760172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762046
ENSMUSG00000027239.15_91760173_91762079_8	chr2	-	972	4	ISM	ENSMUSG00000027239.15	ENSMUST00000069423.13	773	5	46	0	-35	0	intron_retention	FALSE	canonical	3	2268	junction_3	242.697342383472	2840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762079	91760172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716
ENSMUSG00000027239.15_91760173_91762079_9	chr2	-	711	5	NNC	ENSMUSG00000027239.15	novel	773	5	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1138.49604742397	2733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762079	91760172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_91760461_91761162_91761325_91761440_91761600_91761732_91761794_91762038
ENSMUSG00000027239.15_91760173_91762303_1	chr2	-	710	5	NNC	ENSMUSG00000027239.15	novel	1054	5	NA	NA	-178	0	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_4	1314.65099931503	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762303	91760172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_91760461_91761162_91761325_91761440_91761595_91761716_91761794_91762274
ENSMUSG00000027242.15_121337253_121375341_1	chr2	+	3548	14	NNC	ENSMUSG00000027242.15	novel	4170	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	15.000197237362	780	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTTGAGTAATCTT	NA	False	NA	NA	False	AATAAA	-22	NA	121337252	121375341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121374114_121374761
ENSMUSG00000027242.15_121337253_121375341_2	chr2	+	3577	14	NNC	ENSMUSG00000027242.15	novel	4170	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	15.000197237362	764	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTTGAGTAATCTT	NA	False	NA	NA	False	AATAAA	-22	NA	121337252	121375341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121374143_121374761
ENSMUSG00000027242.15_121340329_121375341_1	chr2	+	3544	14	NNC	ENSMUSG00000027242.15	novel	2341	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	15.7213155719746	709	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTTGAGTAATCTT	NA	False	NA	NA	False	AATAAA	-22	NA	121340328	121375341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_121340417_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121374114_121374761
ENSMUSG00000027245.12_121287605_121288792_1	chr2	+	439	4	FSM	ENSMUSG00000027245.12	ENSMUST00000126764.2	961	4	161	361	0	5	multi-exon	FALSE	canonical	3	4276	junction_2	190.202231556017	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCTTCAGTTTCA	NA	False	NA	25	True	AATAAA	-20	NA	121287604	121288792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121287773_121288126_121288183_121288472_121288525_121288629
ENSMUSG00000027245.12_121287605_121288917_1	chr2	+	564	4	FSM	ENSMUSG00000027245.12	ENSMUST00000126764.2	961	4	161	236	0	0	multi-exon	FALSE	canonical	3	4276	junction_2	190.202231556017	7064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGCTCTTATATTGTGT	NA	False	NA	12	True	TATAAA	-20	NA	121287604	121288917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121287773_121288126_121288183_121288472_121288525_121288629
ENSMUSG00000027247.17_91480463_91502671_2	chr2	+	2943	14	FSM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	258	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	49.9501526672271	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGGCTGTTTAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	91480462	91502671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUSG00000027247.17_91480567_91501464_4	chr2	+	1632	14	FSM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	362	1207	0	72	multi-exon	FALSE	canonical	3	195	junction_1	49.9501526672271	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTCACTGCCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	91480566	91501464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUSG00000027247.17_91480567_91502671_1	chr2	+	2854	14	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	87.3500066894048	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGGCTGTTTAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	91480566	91502671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_91480598_91482093_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUSG00000027247.17_91480567_91502671_2	chr2	+	2779	13	FSM	ENSMUSG00000027247.17	ENSMUST00000111331.9	2883	13	104	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	81.5357368819887	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGGCTGTTTAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	91480566	91502671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_91480598_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUSG00000027247.17_91480567_91502671_3	chr2	+	2881	14	NNC	ENSMUSG00000027247.17	novel	2866	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	42	junction_1	115.844059639872	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGGCTGTTTAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	91480566	91502671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_91480598_91482093_91482169_91484390_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUSG00000027247.17_91480567_91502671_4	chr2	+	2839	14	FSM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	362	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	49.9501526672271	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGGCTGTTTAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	91480566	91502671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUSG00000027248.14_121244364_121268461_1	chr2	+	1950	13	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	0	-707	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1168.84989472083	8106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCGTTTTTTTCCCCT	NA	False	NA	5	True	AATAAA	-14	NA	121244363	121268461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_121244687_121252929_121253009_121255005_121255124_121257080_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ENSMUSG00000027248.14_121244364_121268461_2	chr2	+	1899	13	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	0	-707	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1162.02890096016	1433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCGTTTTTTTCCCCT	NA	False	NA	5	True	AATAAA	-14	NA	121244363	121268461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264125_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ENSMUSG00000027248.14_121244364_121268461_3	chr2	+	1942	13	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	0	-707	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1150.32076142555	7700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCGTTTTTTTCCCCT	NA	False	NA	5	True	AATAAA	-14	NA	121244363	121268461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265282_121265399_121266401_121266482_121266837_121266896_121268066
ENSMUSG00000027248.14_121244364_121268461_4	chr2	+	1950	13	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	0	-707	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1162.02890096016	8304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCGTTTTTTTCCCCT	NA	False	NA	5	True	AATAAA	-14	NA	121244363	121268461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264470_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ENSMUSG00000027248.14_121244364_121268461_5	chr2	+	788	5	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	0	-707	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1832.43804465526	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCGTTTTTTTCCCCT	NA	False	NA	5	True	AATAAA	-14	NA	121244363	121268461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_121244490_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ENSMUSG00000027248.14_121244589_121268461_1	chr2	+	1730	13	FSM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	333	707	0	-707	multi-exon	FALSE	canonical	3	3731	junction_4	277.160252481404	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCGTTTTTTTCCCCT	NA	False	NA	5	True	AATAAA	-14	NA	121244588	121268461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ENSMUSG00000027257.14_91087183_91095023_1	chr2	+	1777	10	NNC	ENSMUSG00000027257.14	novel	1862	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	28.1464424434461	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCGTCTTTTGATAGC	4775	False	NA	19	True	AATAAA	-16	NA	91087182	91095023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_91087272_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093529_91093631_91093769_91094109_91094232_91094535
ENSMUSG00000027259.16_120971235_120987159_1	chr2	+	2575	12	NNC	ENSMUSG00000027259.16	novel	2298	10	NA	NA	233	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.0611711732266	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTTGAATTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	120971234	120987159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_120971370_120971727_120971803_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ENSMUSG00000027263.13_121001721_121028140_1	chr2	+	3070	18	FSM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	25	1111	0	610	multi-exon	FALSE	canonical	3	111	junction_12	42.7635326321784	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATACTCAATTTAGCTAT	NA	False	NA	19	True	NA	NA	NA	121001720	121028140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ENSMUSG00000027274.17_136722767_136733087_1	chr2	-	1146	3	FSM	ENSMUSG00000115423.3	ENSMUST00000227806.2	944	3	222	-424	222	424	multi-exon	FALSE	canonical	3	323	junction_1	8.5	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAGTCTGAAGCCTGTA	NA	False	NA	-4	True	AATAAA	-27	NA	136733087	136722766	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_136723560_136727392_136727621_136732962
ENSMUSG00000027282.18_90677617_90695736_1	chr2	+	1047	12	NNC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	762.571281047015	1659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	214	False	NA	52	True	NA	NA	NA	90677616	90695736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_90677730_90679714_90679800_90679941_90680063_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027282.18_90677617_90695736_2	chr2	+	1055	13	NNC	ENSMUSG00000027282.18	novel	2596	13	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	24	junction_2	709.189776356716	7964	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	214	False	NA	52	True	NA	NA	NA	90677616	90695736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_90677730_90679714_90679800_90679946_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027282.18_90677617_90695736_3	chr2	+	1033	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	0	1248	0	1	multi-exon	FALSE	canonical	3	421	junction_3	644.761587047671	2072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	214	False	NA	52	True	NA	NA	NA	90677616	90695736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027282.18_90677617_90695736_4	chr2	+	1053	12	NNC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	762.571281047015	6083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	214	False	NA	52	True	NA	NA	NA	90677616	90695736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_90677730_90679714_90679800_90679941_90680069_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027282.18_90677617_90695736_5	chr2	+	1011	12	NIC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	914.955348230829	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	214	False	NA	52	True	NA	NA	NA	90677616	90695736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_90677708_90679714_90679800_90679941_90680049_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027282.18_90677617_90696986_1	chr2	+	2310	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	118	168	0	2	multi-exon	FALSE	canonical	3	2037	junction_4	251.273534000079	8916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCTTAGCCTGCTGCTT	214	False	NA	9	True	NA	NA	NA	90677616	90696986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027285.14_120439864_120449601_1	chr2	+	644	5	FSM	ENSMUSG00000027285.14	ENSMUST00000028741.14	1430	5	0	786	0	-786	multi-exon	FALSE	canonical	3	33	junction_2	111.162887242101	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGCCTCCTTTACCTT	NA	False	NA	-90	True	NA	NA	NA	120439863	120449601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_120440027_120442818_120442912_120446335_120446469_120448353_120448463_120449455
ENSMUSG00000027285.14_120439864_120449702_1	chr2	+	815	6	FSM	ENSMUSG00000027285.14	ENSMUST00000124187.8	3154	6	0	2339	0	-685	multi-exon	FALSE	canonical	3	158	junction_2	54.4147038951789	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTTTCTAGATTGTTGT	NA	False	NA	11	True	NA	NA	NA	120439863	120449702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455
ENSMUSG00000027285.14_120439864_120449702_2	chr2	+	652	4	NIC	ENSMUSG00000027285.14	novel	1430	5	NA	NA	0	-685	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	136.826735529119	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTTTCTAGATTGTTGT	NA	False	NA	11	True	NA	NA	NA	120439863	120449702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_120440027_120446335_120446469_120448353_120448463_120449455
ENSMUSG00000027285.14_120439864_120449702_3	chr2	+	745	5	FSM	ENSMUSG00000027285.14	ENSMUST00000028741.14	1430	5	0	685	0	-685	multi-exon	FALSE	canonical	3	33	junction_2	111.162887242101	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTTTCTAGATTGTTGT	NA	False	NA	11	True	NA	NA	NA	120439863	120449702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_120440027_120442818_120442912_120446335_120446469_120448353_120448463_120449455
ENSMUSG00000027285.14_120439864_120450387_1	chr2	+	1476	7	NNC	ENSMUSG00000027285.14	novel	3154	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	104.533354591835	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGAATTGAATGTTCC	NA	False	NA	NA	False	TTTAAA	-4	NA	120439863	120450387	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455_120449930_120449953
ENSMUSG00000027285.14_120439864_120451543_2	chr2	+	2632	7	NNC	ENSMUSG00000027285.14	novel	3154	6	NA	NA	0	-498	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	104.533354591835	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGCCCTGCTAAAACAAT	NA	False	NA	NA	False	NA	NA	NA	120439863	120451543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455_120449930_120449953
ENSMUSG00000027285.14_120439864_120452041_1	chr2	+	3084	5	FSM	ENSMUSG00000027285.14	ENSMUST00000028741.14	1430	5	0	-1654	0	0	multi-exon	FALSE	canonical	3	33	junction_2	111.162887242101	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTCCAATATGAATCC	NA	False	NA	NA	False	AATAAA	-16	NA	120439863	120452041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_120440027_120442818_120442912_120446335_120446469_120448353_120448463_120449455
ENSMUSG00000027285.14_120439864_120452041_2	chr2	+	3130	7	NNC	ENSMUSG00000027285.14	novel	3154	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	104.533354591835	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTCCAATATGAATCC	NA	False	NA	NA	False	AATAAA	-16	NA	120439863	120452041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455_120449930_120449953
ENSMUSG00000027286.17_120434719_120439836_1	chr2	-	1796	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102499.8	1961	6	165	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	57.8321709777525	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	120439836	120434718	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439761
ENSMUSG00000027286.17_120434719_120439836_3	chr2	-	1802	6	NNC	ENSMUSG00000027286.17	novel	1962	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	69.0582362937253	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	120439836	120434718	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439755
ENSMUSG00000027287.15_120398178_120430228_1	chr2	+	1189	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	26	1508	0	-1508	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGACGAGTGCTTGGGGT	NA	False	NA	NA	False	ATTAAA	-21	NA	120398177	120430228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ENSMUSG00000027287.15_120398178_120431061_2	chr2	+	2022	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	26	675	0	-675	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTCCAATAGAAAGCTGT	NA	False	NA	15	True	AATAAA	-20	NA	120398177	120431061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ENSMUSG00000027291.16_120147080_120183602_1	chr2	-	4197	25	FSM	ENSMUSG00000027291.16	ENSMUST00000028752.8	4339	25	4	138	0	-138	multi-exon	FALSE	canonical	3	237	junction_15	25.6031410833385	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183602	120147079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ENSMUSG00000027293.14_119919968_119985087_1	chr2	-	3418	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	0	312	0	-312	multi-exon	FALSE	canonical	3	216	junction_2	18.4217263034711	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGTGAGTCTGTCTCT	NA	False	NA	-9	True	AATATA	-13	NA	119985087	119919967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
ENSMUSG00000027293.14_119920866_119985087_1	chr2	-	2520	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	0	1210	0	-1210	multi-exon	FALSE	canonical	3	216	junction_2	18.4217263034711	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTCCCAGAGCCT	NA	False	NA	-11	True	AATAAA	-14	NA	119985087	119920865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
ENSMUSG00000027300.11_130433250_130471947_1	chr2	-	2539	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	0	-1328	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	289	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATTCCTCCTAGCACA	NA	False	NA	NA	False	AATAAA	-19	NA	130471947	130433249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
ENSMUSG00000027300.11_130433493_130471947_1	chr2	-	2296	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	0	-1571	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGCCAGCCCTCACTGG	NA	False	NA	NA	False	NA	NA	NA	130471947	130433492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
ENSMUSG00000027305.10_119485927_119493279_1	chr2	-	1354	5	NNC	ENSMUSG00000027305.10	novel	1478	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	127.660683062562	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	False	NA	-1	True	AATAAA	-21	NA	119493279	119485926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493191
ENSMUSG00000027305.10_119485927_119493279_2	chr2	-	1099	4	NIC	ENSMUSG00000027305.10	novel	1308	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	130.10337769977	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	False	NA	-1	True	AATAAA	-21	NA	119493279	119485926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_119486274_119486848_119486924_119490482_119491141_119493260
ENSMUSG00000027306.16_119439993_119448950_1	chr2	+	1541	6	NIC	ENSMUSG00000027306.16	novel	2960	11	NA	NA	-8786	-12036	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCGCGCGCCTCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	119439992	119448950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
ENSMUSG00000027306.16_119449198_119479572_1	chr2	+	1472	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	419	1069	0	-1069	multi-exon	FALSE	canonical	3	927	junction_3	141.2501327433	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTAGTGTCTCTTCTG	NA	False	NA	-54	True	NA	NA	NA	119449197	119479572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUSG00000027306.16_119449198_119480020_1	chr2	+	1920	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	419	621	0	-621	multi-exon	FALSE	canonical	3	927	junction_3	141.2501327433	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGCTTTAGTTGTACA	NA	False	NA	NA	False	AATAAA	-15	NA	119449197	119480020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUSG00000027306.16_119449198_119480258_1	chr2	+	2158	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	419	383	0	-383	multi-exon	FALSE	canonical	3	927	junction_3	141.2501327433	2422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTCATTGTTTTAAGCG	NA	False	NA	12	True	AATAAA	-15	NA	119449197	119480258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUSG00000027309.19_130645306_130682031_1	chr2	-	1292	8	Fusion	ENSMUSG00000089662.2_ENSMUSG00000027309.19	novel	1984	7	NA	NA	0	115	multi-exon	TRUE	canonical	3	31	junction_1	16.7063473211928	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTGTGTATGTGT	NA	False	NA	1	True	AATAAA	-32	NA	130682031	130645305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_-_130645843_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ENSMUSG00000027313.4_119181710_119184862_1	chr2	+	1516	3	NNC	ENSMUSG00000027313.4	novel	1637	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	280	615	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAGTAGGGAAAGCCTC	7152	False	NA	81	True	GATAAA	-13	NA	119181709	119184862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_119181997_119182837_119182874_119183669
ENSMUSG00000027323.11_118943298_118954591_1	chr2	+	890	5	ISM	ENSMUSG00000027323.11	ENSMUST00000110828.2	2849	7	3	9489	0	264	5prime_fragment	FALSE	canonical	3	719	junction_4	88.7901317714981	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTTACTTTATGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	118943297	118954591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264
ENSMUSG00000027323.11_118943298_118966205_1	chr2	+	1635	11	NNC	ENSMUSG00000027323.11	novel	3368	10	NA	NA	0	516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	247.228153736584	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGTGTTATTTGCTGG	NA	False	NA	18	True	AATAAA	-14	NA	118943297	118966205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529_118965750_118965906
ENSMUSG00000027323.11_118943298_118966205_2	chr2	+	1792	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	10	1566	0	516	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGTGTTATTTGCTGG	NA	False	NA	18	True	AATAAA	-14	NA	118943297	118966205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ENSMUSG00000027323.11_118943298_118966554_1	chr2	+	2141	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	10	1217	0	865	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGAAGAAAGCTCAAAAG	NA	False	NA	10	True	ATTAAA	-17	NA	118943297	118966554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ENSMUSG00000027323.11_118967482_118987445_1	chr2	+	2179	13	NIC	ENSMUSG00000027323.11	novel	3368	10	NA	NA	2839	9519	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGTCCTTAATCCGCGCC	NA	False	NA	NA	False	NA	NA	NA	118967481	118987445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
ENSMUSG00000027326.14_118877631_118899374_1	chr2	+	1501	8	FSM	ENSMUSG00000027326.14	ENSMUST00000028799.12	5527	8	0	4026	0	-378	multi-exon	FALSE	canonical	3	41	junction_1	11.0822527732683	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATAAAATTCATATTAT	7242	False	NA	NA	False	GATAAA	-37	NA	118877630	118899374	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603
ENSMUSG00000027326.14_118877818_118899374_1	chr2	+	1314	8	FSM	ENSMUSG00000027326.14	ENSMUST00000028799.12	5527	8	187	4026	187	-378	multi-exon	FALSE	canonical	3	41	junction_1	11.0822527732683	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATAAAATTCATATTAT	7429	False	NA	NA	False	GATAAA	-37	NA	118877817	118899374	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603
ENSMUSG00000027327.17_130988714_131001967_1	chr2	-	799	6	FSM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	-27	469	-5	0	multi-exon	FALSE	canonical	3	656	junction_1	33.1336686770421	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGGTGTGGCTTCCTCAC	NA	False	NA	NA	False	NA	NA	NA	131001967	130988713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513_130995631_131001872
ENSMUSG00000027331.16_118644713_118665128_1	chr2	+	1482	10	FSM	ENSMUSG00000027331.16	ENSMUST00000123104.2	839	10	-64	-579	0	5	multi-exon	FALSE	canonical	2	5	junction_7	167.506403046953	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTGACTAACACTAGGG	NA	False	NA	26	True	AATAAA	-19	NA	118644712	118665128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118661292_118661451_118662033_118662109_118664480
ENSMUSG00000027331.16_118644713_118665128_3	chr2	+	1318	9	NNC	ENSMUSG00000027331.16	novel	4602	9	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	137.118333930952	1256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTGACTAACACTAGGG	NA	False	NA	26	True	AATAAA	-19	NA	118644712	118665128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659445_118659496_118662033_118662109_118664480
ENSMUSG00000027333.19_131333843_131367087_1	chr2	+	2095	7	FSM	ENSMUSG00000027333.19	ENSMUST00000028806.12	2270	7	159	16	0	0	multi-exon	FALSE	canonical	3	113	junction_6	10.8269211792745	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGCTCCTTTGCTTCTCTC	NA	False	NA	15	True	AATAAA	-16	NA	131333842	131367087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366662
ENSMUSG00000027341.11_132081922_132089694_1	chr2	-	1069	4	FSM	ENSMUSG00000027341.11	ENSMUST00000028816.9	1612	4	33	510	-5	-508	multi-exon	FALSE	canonical	3	556	junction_2	26.7332502076846	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCCTCCACCTTCATA	4903	False	NA	NA	False	ATTAAA	-19	NA	132089694	132081921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089492
ENSMUSG00000027341.11_132087086_132089676_1	chr2	-	510	3	FSM	ENSMUSG00000027341.11	ENSMUST00000143782.2	359	3	3	-154	0	154	multi-exon	FALSE	canonical	3	26	junction_1	297	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGAAATGAATATATTTA	4921	False	NA	NA	False	AATAAA	-19	NA	132089676	132087085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_132087293_132087875_132087995_132089492
ENSMUSG00000027342.15_132091082_132095097_1	chr2	-	1381	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	137	0	137	0	multi-exon	FALSE	canonical	3	1968	junction_1	234.222629137323	9511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGTTGTGCAAAGTTTTC	8362	False	NA	-10	True	AATAAA	-27	NA	132095097	132091081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
ENSMUSG00000027342.15_132091206_132094516_1	chr2	-	1102	6	NIC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	0	-124	combination_of_known_junctions	FALSE	canonical	3	44	junction_5	901.923721830178	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCAGTGCCGCCTTTGT	8943	False	NA	-3	True	AATAAA	-21	NA	132094516	132091205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094309
ENSMUSG00000027342.15_132091206_132095097_1	chr2	-	1257	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	137	124	137	-124	multi-exon	FALSE	canonical	3	1968	junction_1	234.222629137323	9158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCAGTGCCGCCTTTGT	8362	False	NA	-3	True	AATAAA	-21	NA	132095097	132091205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
ENSMUSG00000027342.15_132091396_132095097_1	chr2	-	1067	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	137	314	137	-314	multi-exon	FALSE	canonical	3	1968	junction_1	234.222629137323	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTACTTTCTTTTCTCT	8362	False	NA	NA	False	AATAAA	-23	NA	132095097	132091395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
ENSMUSG00000027346.16_132376681_132420098_1	chr2	-	1746	18	ISM	ENSMUSG00000027346.16	ENSMUST00000060955.12	3686	20	55	5679	0	-609	5prime_fragment	FALSE	canonical	3	65	junction_14	14.875027260014	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGACCTCAGATCTCGGAC	NA	False	NA	NA	False	NA	NA	NA	132420098	132376680	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414175_132419987
ENSMUSG00000027347.19_117112617_117169022_1	chr2	-	2840	16	ISM	ENSMUSG00000027347.19	ENSMUST00000178884.8	5104	17	4336	2142	4168	406	3prime_fragment	FALSE	non_canonical	0	0	junction_14	12.4250642743699	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCATAACGGAAACAATAG	NA	False	NA	NA	False	NA	NA	NA	117169022	117112616	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_117113158_117115333_117115714_117116552_117116706_117117322_117117360_117118304_117118450_117119097_117119208_117119825_117119931_117120796_117120878_117122146_117122423_117124234_117124352_117125189_117125364_117128942_117129097_117130923_117131056_117132441_117132503_117136256_117136365_117168756
ENSMUSG00000027347.19_117119869_117169022_1	chr2	-	1431	10	ISM	ENSMUSG00000027347.19	ENSMUST00000178884.8	5104	17	4336	9394	4168	-6846	internal_fragment	FALSE	non_canonical	0	0	junction_8	15.0217948657161	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACCCAAAGACCATCAGCA	NA	False	NA	NA	False	NA	NA	NA	117169022	117119868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_117119931_117120796_117120878_117122146_117122423_117124234_117124352_117125189_117125364_117128942_117129097_117130923_117131056_117132441_117132503_117136256_117136365_117168756
ENSMUSG00000027353.15_132658144_132685463_1	chr2	+	2744	19	FSM	ENSMUSG00000027353.15	ENSMUST00000028831.15	3179	19	83	352	0	-352	multi-exon	FALSE	canonical	3	131	junction_1	21.8867032185704	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTACCAACTTCAAACTAT	NA	False	NA	NA	False	AAGAAA	-10	NA	132658143	132685463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ENSMUSG00000027353.15_132658144_132685617_1	chr2	+	2898	19	FSM	ENSMUSG00000027353.15	ENSMUST00000028831.15	3179	19	83	198	0	-198	multi-exon	FALSE	canonical	3	131	junction_1	21.8867032185704	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAGAAGAGTAAGAAGAGT	NA	False	NA	26	True	AATAAA	-18	NA	132658143	132685617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ENSMUSG00000027363.16_126549280_126600791_1	chr2	+	3702	19	FSM	ENSMUSG00000027363.16	ENSMUST00000028841.14	4145	19	17	426	0	-377	multi-exon	FALSE	canonical	3	323	junction_9	42.2163738639668	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAATTCATTAGTCAGA	3593	False	NA	NA	False	AAAACA	-25	NA	126549279	126600791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ENSMUSG00000027367.17_127112654_127140853_1	chr2	+	2612	8	FSM	ENSMUSG00000027367.17	ENSMUST00000110375.9	3116	8	505	-1	0	1	multi-exon	FALSE	canonical	3	326	junction_5	27.592515992122	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGAGTGTTCATTTCTG	NA	False	NA	10	True	AATAAA	-17	NA	127112653	127140853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_127112801_127126014_127126224_127126451_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
ENSMUSG00000027371.11_127278136_127286477_1	chr2	-	1057	7	NIC	ENSMUSG00000027371.11	novel	1462	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	35.4044096437467	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGCTTCCACTGTCTT	NA	False	NA	-5	True	AATAAA	-18	NA	127286477	127278135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_127278327_127278465_127278554_127278656_127278766_127280429_127280490_127282305_127282523_127283793_127284045_127286336
ENSMUSG00000027374.13_127429339_127445904_1	chr2	+	506	5	NNC	ENSMUSG00000027374.13	novel	3228	11	NA	NA	0	129	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	561.46343380491	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACATGGTATATAGCTG	4164	False	NA	25	True	AATAAA	-22	NA	127429338	127445904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436459_127445785
ENSMUSG00000027374.13_127429339_127445904_2	chr2	+	1439	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	197	2845	0	129	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	5661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACATGGTATATAGCTG	4164	False	NA	25	True	AATAAA	-22	NA	127429338	127445904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ENSMUSG00000027374.13_127429339_127445904_3	chr2	+	1428	11	NNC	ENSMUSG00000027374.13	novel	3228	11	NA	NA	0	129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	437.32990979351	3798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACATGGTATATAGCTG	4164	False	NA	25	True	AATAAA	-22	NA	127429338	127445904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127440081_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ENSMUSG00000027374.13_127429339_127445904_4	chr2	+	1434	11	NNC	ENSMUSG00000027374.13	novel	3228	11	NA	NA	0	129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	437.32990979351	5206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACATGGTATATAGCTG	4164	False	NA	25	True	AATAAA	-22	NA	127429338	127445904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127440075_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ENSMUSG00000027374.13_127432361_127445904_1	chr2	+	1413	12	NIC	ENSMUSG00000027374.13	novel	424	5	NA	NA	0	129	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	397.120336904912	2326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACATGGTATATAGCTG	7186	False	NA	25	True	AATAAA	-22	NA	127432360	127445904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_127432402_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ENSMUSG00000027375.15_127475146_127498179_1	chr2	-	2342	4	FSM	ENSMUSG00000027375.15	ENSMUST00000028854.15	2778	4	436	0	-40	0	multi-exon	FALSE	canonical	3	105	junction_3	8.83176086632785	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTCTCACTCTTTTGT	NA	False	NA	-2	True	ATTAAA	-17	NA	127498179	127475145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_127476975_127480508_127480635_127482140_127482309_127497960
ENSMUSG00000027379.14_127643042_127673785_1	chr2	-	3376	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	0	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_18	178.998836122846	1215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCTAGTTGTTCTAA	NA	False	NA	-5	True	AATAAA	-18	NA	127673785	127643041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659357_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ENSMUSG00000027379.14_127656413_127673785_1	chr2	-	1748	13	ISM	ENSMUSG00000027379.15	ENSMUST00000028858.9	3418	25	0	13368	0	-3956	5prime_fragment	FALSE	canonical	0	0	junction_6	189.561042645605	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGCAGTGTTGTGATAAT	NA	False	NA	NA	False	AATAAA	-24	NA	127673785	127656412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ENSMUSG00000027384.7_140012633_140045556_2	chr2	+	1145	12	NNC	ENSMUSG00000027384.7	novel	1166	11	NA	NA	0	4	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_8	93.0171938251603	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTTCCCAGAATTTT	NA	False	NA	15	True	AATAAA	-15	NA	140012632	140045556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140041284_140041381_140044785_140044870_140045207_140045291_140045451
ENSMUSG00000027384.7_140012633_140045556_3	chr2	+	1027	11	NNC	ENSMUSG00000027384.7	novel	1166	11	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	69.9549140518377	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTTCCCAGAATTTT	NA	False	NA	15	True	AATAAA	-15	NA	140012632	140045556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030656_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
ENSMUSG00000027384.7_140012950_140045556_1	chr2	+	917	11	NNC	ENSMUSG00000027384.7	novel	1200	11	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	97.8723658649366	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTTCCCAGAATTTT	NA	False	NA	15	True	AATAAA	-15	NA	140012949	140045556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_140013061_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030656_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
ENSMUSG00000027384.7_140012950_140045556_2	chr2	+	1053	11	NNC	ENSMUSG00000027384.7	novel	1200	11	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	76.7072356430604	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTTCCCAGAATTTT	NA	False	NA	15	True	AATAAA	-15	NA	140012949	140045556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_140013175_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
ENSMUSG00000027387.12_128772790_128785997_1	chr2	-	850	6	ISM	ENSMUSG00000027387.12	ENSMUST00000028866.9	1624	9	0	4602	0	-4602	5prime_fragment	FALSE	canonical	3	222	junction_5	22.6044243456895	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAGAAGAAAAAGGAAATG	NA	False	NA	NA	False	NA	NA	NA	128785997	128772789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
ENSMUSG00000027394.14_128907905_128935666_1	chr2	+	1987	7	FSM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	43	2537	0	-2537	multi-exon	FALSE	canonical	3	70	junction_4	11.1118055338555	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGATAATCTTACTTTAC	NA	False	NA	NA	False	AAAACA	-10	NA	128907904	128935666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913_128931058_128934860
ENSMUSG00000027404.17_130013555_130021286_1	chr2	-	651	4	NNC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1711.14393186417	947	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCATTTGTCTTCTGA	NA	False	NA	-11	True	AATAAA	-28	NA	130021286	130013554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_130013864_130014522_130014580_130018934_130019087_130021153
ENSMUSG00000027404.17_130013555_130021286_2	chr2	-	1248	8	FSM	ENSMUSG00000027404.17	ENSMUST00000147570.3	1133	8	37	-152	-32	0	multi-exon	TRUE	canonical	3	49	junction_6	1649.031750539	14835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCATTTGTCTTCTGA	NA	False	NA	-11	True	AATAAA	-28	NA	130021286	130013554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018548_130018673_130018934_130019087_130021153
ENSMUSG00000027405.17_130116366_130121228_1	chr2	+	2340	12	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	433	junction_11	590.287953263994	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332
ENSMUSG00000027405.17_130116366_130121228_2	chr2	+	2014	13	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	170	junction_12	786.810487382798	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120491_130120816
ENSMUSG00000027405.17_130116366_130121228_3	chr2	+	2199	11	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	1876	junction_8	240.71859088986	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120816
ENSMUSG00000027405.17_130116366_130121228_4	chr2	+	1939	11	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	1876	junction_8	241.9110580358	4985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ENSMUSG00000027405.17_130116366_130121228_5	chr2	+	1850	12	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	699.470094588139	4873	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_130116397_130116553_130116644_130116957_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ENSMUSG00000027405.17_130116366_130121228_6	chr2	+	1851	12	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	706.512316164808	5407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120206_130120816
ENSMUSG00000027405.17_130116366_130121228_7	chr2	+	1975	13	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	803.725630354594	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
ENSMUSG00000027405.17_130121229_130126354_1	chr2	+	1214	12	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	1598	5121	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGGGAAGTGACGCCGGA	NA	False	NA	NA	False	NA	NA	NA	130121228	130126354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_130121358_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ENSMUSG00000027406.14_130121229_130126354_1	chr2	-	1503	12	FSM	ENSMUSG00000027406.14	ENSMUST00000028892.11	1616	12	113	0	0	0	multi-exon	FALSE	canonical	3	745	junction_6	49.1089192551946	4168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	130126354	130121228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ENSMUSG00000027411.18_130266285_130285654_1	chr2	+	2621	24	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	83.6383654878219	937	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTTGTATGCTGTCTG	NA	False	NA	21	True	AATAAA	-21	NA	130266284	130285654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282924_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ENSMUSG00000027411.18_130266285_130285654_2	chr2	+	2715	23	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_14	85.518025261509	563	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTTGTATGCTGTCTG	NA	False	NA	21	True	AATAAA	-21	NA	130266284	130285654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ENSMUSG00000027411.18_130266285_130285654_3	chr2	+	2617	24	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	107.960872979603	642	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTTGTATGCTGTCTG	NA	False	NA	21	True	AATAAA	-21	NA	130266284	130285654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283536_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ENSMUSG00000027420.14_143668448_143690943_1	chr2	-	1713	6	ISM	ENSMUSG00000027420.14	ENSMUST00000028907.14	2372	8	14150	0	13920	0	3prime_fragment	FALSE	canonical	0	0	junction_2	2.92574776766556	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCTCGTGTAATTAATA	NA	False	NA	-2	True	ATTAAA	-25	NA	143690943	143668447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_143669560_143672003_143672090_143673756_143673978_143683593_143683702_143687820_143687911_143690847
ENSMUSG00000027423.16_144092043_144112713_1	chr2	-	2399	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	113	0	-9	0	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTTCTGACTGTTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	144112713	144092042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ENSMUSG00000027423.16_144092453_144112492_1	chr2	-	2009	13	FSM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	0	410	0	-410	multi-exon	FALSE	canonical	3	1195	junction_10	117.133352305064	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATGGAGTGCTTTTGTA	NA	False	NA	-21	True	AATAAA	-15	NA	144112492	144092452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ENSMUSG00000027423.16_144092453_144112713_1	chr2	-	1989	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	113	410	-9	-410	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATGGAGTGCTTTTGTA	NA	False	NA	-21	True	AATAAA	-15	NA	144112713	144092452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ENSMUSG00000027423.16_144092984_144112492_1	chr2	-	1478	13	FSM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	0	941	0	0	multi-exon	FALSE	canonical	3	1195	junction_10	117.133352305064	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCTTAACACTTAACCA	NA	False	NA	-17	True	AATAAA	-15	NA	144112492	144092983	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ENSMUSG00000027423.16_144092984_144112713_1	chr2	-	1458	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	113	941	-9	0	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCTTAACACTTAACCA	NA	False	NA	-17	True	AATAAA	-15	NA	144112713	144092983	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ENSMUSG00000027424.12_144112820_144122436_1	chr2	+	2071	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110028.8	2308	5	237	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	188.862383761299	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCTTTCAGTGGACC	NA	False	NA	14	True	AATAAA	-16	NA	144112819	144122436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144112935_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ENSMUSG00000027424.12_144112820_144122436_2	chr2	+	2129	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	0	711	0	0	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCTTTCAGTGGACC	NA	False	NA	14	True	AATAAA	-16	NA	144112819	144122436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ENSMUSG00000027424.12_144112861_144122436_1	chr2	+	2030	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110028.8	2308	5	278	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	188.862383761299	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCTTTCAGTGGACC	NA	False	NA	14	True	AATAAA	-16	NA	144112860	144122436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144112935_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ENSMUSG00000027424.12_144112861_144122436_2	chr2	+	2088	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	41	711	0	0	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCTTTCAGTGGACC	NA	False	NA	14	True	AATAAA	-16	NA	144112860	144122436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ENSMUSG00000027424.12_144112966_144122436_2	chr2	+	1983	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	146	711	105	0	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCTTTCAGTGGACC	NA	False	NA	14	True	AATAAA	-16	NA	144112965	144122436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ENSMUSG00000027427.14_144369668_144380814_1	chr2	+	1272	9	FSM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	30	3101	0	0	multi-exon	FALSE	canonical	3	42	junction_5	6.30352084156148	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACCTTGAAGGTCTGG	627	False	NA	NA	False	AATAAA	-32	NA	144369667	144380814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144376218_144376332_144377860_144378005_144378202_144378311_144379085_144379278_144380531
ENSMUSG00000027427.14_144369668_144380900_1	chr2	+	1358	9	FSM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	30	3015	0	86	multi-exon	FALSE	canonical	3	42	junction_5	6.30352084156148	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTCACTAGAGTTGCTT	627	False	NA	NA	False	GATAAA	-15	NA	144369667	144380900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144376218_144376332_144377860_144378005_144378202_144378311_144379085_144379278_144380531
ENSMUSG00000027427.14_144369668_144381925_1	chr2	+	2383	9	FSM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	30	1990	0	1111	multi-exon	FALSE	canonical	3	42	junction_5	6.30352084156148	2888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTCTTTTTTCCATTT	627	False	NA	4	True	NA	NA	NA	144369667	144381925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144376218_144376332_144377860_144378005_144378202_144378311_144379085_144379278_144380531
ENSMUSG00000027428.10_144384185_144392730_1	chr2	-	2108	5	NNC	ENSMUSG00000027428.10	novel	2170	5	NA	NA	-20	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	111.275278027062	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGACTGCTGTGGTGC	NA	False	NA	-9	True	AATAAA	-20	NA	144392730	144384184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_144385930_144386293_144386372_144389908_144390020_144391023_144391067_144392599
ENSMUSG00000027429.17_144398201_144432669_1	chr2	+	2725	20	NNC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	132.014898848598	839	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTTTGTCTCATTTT	NA	False	NA	NA	False	AATAAA	-37	NA	144398200	144432669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_144398245_144401137_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ENSMUSG00000027429.17_144398201_144432669_2	chr2	+	2736	20	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	371	junction_1	64.9806278398403	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTTTGTCTCATTTT	NA	False	NA	NA	False	AATAAA	-37	NA	144398200	144432669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_144398245_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ENSMUSG00000027430.13_144441917_144610360_1	chr2	+	932	6	FSM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	100	318	100	0	multi-exon	FALSE	canonical	3	290	junction_5	10.373041983912	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTCCCCATGGAGAGGG	NA	False	NA	NA	False	NA	NA	NA	144441916	144610360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144442012_144445707_144445799_144459111_144459348_144477677_144477785_144588820_144588994_144610130
ENSMUSG00000027430.13_144441917_144610678_1	chr2	+	1250	6	FSM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	100	0	100	0	multi-exon	FALSE	canonical	3	290	junction_5	10.373041983912	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTTTTCTGTAGAAATG	NA	False	NA	NA	False	ATTAAA	-20	NA	144441916	144610678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144442012_144445707_144445799_144459111_144459348_144477677_144477785_144588820_144588994_144610130
ENSMUSG00000027433.6_146854916_146910963_1	chr2	+	2962	28	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	0	8957	0	143	5prime_fragment	TRUE	canonical	3	956	junction_9	69.0320098312682	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCCTGTGTTTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	146854915	146910963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711
ENSMUSG00000027433.6_146854916_146919579_1	chr2	+	3088	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	0	-341	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	212.180912420791	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTATCTGTGTGTAT	NA	False	NA	18	True	AATAAA	-19	NA	146854915	146919579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869519_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ENSMUSG00000027433.6_146854916_146919579_3	chr2	+	3093	30	FSM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	0	341	0	-341	multi-exon	FALSE	canonical	3	956	junction_9	74.1082057489866	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTATCTGTGTGTAT	NA	False	NA	18	True	AATAAA	-19	NA	146854915	146919579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ENSMUSG00000027433.6_146854916_146919920_1	chr2	+	3429	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	212.180912420791	2138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854915	146919920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869519_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ENSMUSG00000027433.6_146854916_146919920_3	chr2	+	3441	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	209.587857841474	2130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854915	146919920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916954_146919402
ENSMUSG00000027433.6_146854916_146919920_4	chr2	+	3429	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	211.308482255229	1921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854915	146919920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_146855117_146866427_146866556_146866639_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ENSMUSG00000027439.10_148523131_148533848_1	chr2	+	3023	6	FSM	ENSMUSG00000027439.10	ENSMUST00000028928.8	4232	6	188	1021	0	-1021	multi-exon	FALSE	canonical	3	53	junction_1	11.7983049630021	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTCACAGGGGAAGATG	559	False	NA	NA	False	NA	NA	NA	148523130	148533848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_148523136_148525513_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
ENSMUSG00000027452.12_150460025_150502147_1	chr2	-	3359	14	NNC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	7987	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_13	46.5577201092917	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGATGTTTTTGGTTGAC	NA	False	NA	-5	True	AATAAA	-27	NA	150502147	150460024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150502032
ENSMUSG00000027454.11_150751514_150773200_1	chr2	+	1081	7	NNC	ENSMUSG00000027454.11	novel	1087	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	164.972135694352	1466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAATCTCCTGGTAGCTT	2422	False	NA	23	True	AATAAA	-30	NA	150751513	150773200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767807_150767919_150769961_150770037_150772760
ENSMUSG00000027455.17_151336102_151353225_1	chr2	+	1475	9	FSM	ENSMUSG00000027455.17	ENSMUST00000028949.16	1364	9	-111	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_3	133.71979799192	3784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACCAATTCTGTTATAT	NA	False	NA	19	True	AAGAAA	-1	NA	151336101	151353225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151336333_151338503_151338602_151342634_151342710_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ENSMUSG00000027463.15_151838455_151850670_1	chr2	+	2161	5	FSM	ENSMUSG00000027463.15	ENSMUST00000073228.12	2669	5	0	508	0	-472	multi-exon	FALSE	canonical	3	44	junction_1	24.8294180358703	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGGTCCTGGGTCCCA	NA	False	NA	NA	False	NA	NA	NA	151838454	151850670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151838572_151845971_151846599_151847451_151847940_151849400_151849525_151849865
ENSMUSG00000027463.15_151838455_151850906_1	chr2	+	2397	5	FSM	ENSMUSG00000027463.15	ENSMUST00000073228.12	2669	5	0	272	0	-236	multi-exon	FALSE	canonical	3	44	junction_1	24.8294180358703	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGGGCTGTGTACACA	NA	False	NA	13	True	ATTAAA	-17	NA	151838454	151850906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151838572_151845971_151846599_151847451_151847940_151849400_151849525_151849865
ENSMUSG00000027463.15_151841817_151850670_1	chr2	+	2086	5	FSM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	32	472	0	-472	multi-exon	FALSE	canonical	3	48	junction_1	23.0976189249022	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGGTCCTGGGTCCCA	NA	False	NA	NA	False	NA	NA	NA	151841816	151850670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400_151849525_151849865
ENSMUSG00000027463.15_151841817_151850906_1	chr2	+	2322	5	FSM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	32	236	0	-236	multi-exon	FALSE	canonical	3	48	junction_1	23.0976189249022	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGGGCTGTGTACACA	NA	False	NA	13	True	ATTAAA	-17	NA	151841816	151850906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400_151849525_151849865
ENSMUSG00000027469.17_152690002_152735938_1	chr2	+	2740	18	FSM	ENSMUSG00000027469.17	ENSMUST00000178997.8	4161	18	118	1303	0	-636	multi-exon	FALSE	canonical	3	176	junction_2	164.31464036434	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGTTTCAGTCACAG	2812	False	NA	17	True	AATAAA	-16	NA	152690001	152735938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_152690030_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUSG00000027469.17_152690002_152735938_2	chr2	+	2756	18	NIC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	0	-636	combination_of_known_junctions	FALSE	canonical	3	164	junction_2	166.868304785146	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGTTTCAGTCACAG	2812	False	NA	17	True	AATAAA	-16	NA	152690001	152735938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_152690030_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUSG00000027472.15_152851390_152857309_1	chr2	-	655	5	FSM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	38	580	-12	0	multi-exon	FALSE	canonical	3	235	junction_2	13.6656503687164	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTCACCAGAGCTTGGAC	8677	False	NA	NA	False	NA	NA	NA	152857309	152851389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857153
ENSMUSG00000027479.15_153583194_153609255_1	chr2	+	1353	7	NNC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	0	-5975	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	420.157675429382	1179	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATATGCTTCCATAT	NA	False	NA	14	True	AATAAA	-18	NA	153583193	153609255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603463_153603578_153606866_153607020_153608793
ENSMUSG00000027485.16_154054702_154062263_1	chr2	+	963	8	ISM	ENSMUSG00000027485.16	ENSMUST00000028987.7	1637	16	12403	0	12403	0	3prime_fragment	FALSE	canonical	1	1	junction_4	2.49897938350513	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTTGTCCGGGTGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	154054701	154062263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_154055034_154055384_154055439_154055913_154056073_154057180_154057249_154058135_154058182_154059090_154059155_154060123_154060201_154062100
ENSMUSG00000027487.12_154177306_154214639_1	chr2	-	2069	14	NIC	ENSMUSG00000027487.12	novel	1970	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	25.3818180276853	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTTCCTTGTCTACTT	5680	False	NA	-15	True	AATAAA	-12	NA	154214639	154177305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214501
ENSMUSG00000027489.16_154386319_154400774_1	chr2	-	1853	13	NNC	ENSMUSG00000027489.16	novel	1829	13	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	canonical	3	27	junction_6	11.513277359447	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCCCCTGTCTCT	7323	False	NA	-15	True	AATAAA	-24	NA	154400774	154386318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388837_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
ENSMUSG00000027489.16_154386965_154400774_1	chr2	-	1258	12	NIC	ENSMUSG00000027489.16	novel	1829	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	34	junction_5	10.4470328738723	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACCAGGCTAAAGGCCTG	7323	False	NA	NA	False	ACTAAA	-17	NA	154400774	154386964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388801_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
ENSMUSG00000027495.5_172187485_172194868_1	chr2	+	816	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	0	2801	0	-2801	multi-exon	FALSE	canonical	3	138	junction_1	7.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTAATGCTGTT	NA	False	NA	NA	False	NA	NA	NA	172187484	172194868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_172187768_172193374_172193545_172194505
ENSMUSG00000027495.5_172187485_172195809_1	chr2	+	1757	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	0	1860	0	-1860	multi-exon	FALSE	canonical	3	138	junction_1	7.5	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTTAATTAGGGTCCT	NA	False	NA	NA	False	AATACA	-15	NA	172187484	172195809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_172187768_172193374_172193545_172194505
ENSMUSG00000027496.16_172198319_172212441_1	chr2	-	1717	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	-15	203	0	-203	multi-exon	FALSE	canonical	3	87	junction_8	405.788969169937	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAAGTGACACCCATTC	NA	False	NA	-16	True	AATAAA	-19	NA	172212441	172198318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212314
ENSMUSG00000027498.15_172212601_172223001_1	chr2	+	1966	6	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	0	-1367	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	102.721760109531	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACTGTTCCTCCTTCTT	NA	False	NA	15	True	AATAAA	-15	NA	172212600	172223001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
ENSMUSG00000027498.15_172212601_172223001_2	chr2	+	1923	6	NNC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	0	-1367	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	151.072168184613	1002	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACTGTTCCTCCTTCTT	NA	False	NA	15	True	AATAAA	-15	NA	172212600	172223001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_172212734_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
ENSMUSG00000027500.11_8574420_8625550_1	chr3	+	957	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	0	1116	0	-1085	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	13172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTGCAGAATGTTTTG	NA	False	NA	10	True	NA	NA	NA	8574419	8625550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
ENSMUSG00000027500.11_8574575_8625550_1	chr3	+	802	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	155	1116	0	-1085	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	12909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTGCAGAATGTTTTG	NA	False	NA	10	True	NA	NA	NA	8574574	8625550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
ENSMUSG00000027500.11_8574575_8625550_2	chr3	+	797	5	NNC	ENSMUSG00000027500.11	novel	2073	5	NA	NA	0	-1085	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	788.751030110262	12575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTGCAGAATGTTTTG	NA	False	NA	10	True	NA	NA	NA	8574574	8625550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625330
ENSMUSG00000027500.11_8574575_8626666_1	chr3	+	1918	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	155	0	0	0	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	15342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGGTTTGGTCTGGTCTC	NA	False	NA	23	True	AATAAA	-23	NA	8574574	8626666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
ENSMUSG00000027502.12_172282476_172310791_1	chr2	+	1136	9	FSM	ENSMUSG00000027502.12	ENSMUST00000029005.4	2173	9	0	1037	0	-1037	multi-exon	FALSE	canonical	3	407	junction_4	19.7416912902618	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCGTGGTCACTTGCTG	NA	False	NA	10	True	TATAAA	-21	NA	172282475	172310791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515
ENSMUSG00000027502.12_172282476_172311514_1	chr2	+	1859	9	FSM	ENSMUSG00000027502.12	ENSMUST00000029005.4	2173	9	0	314	0	-314	multi-exon	FALSE	canonical	3	407	junction_4	19.7416912902618	1364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGGTGGCATGTCTAA	NA	False	NA	NA	False	NA	NA	NA	172282475	172311514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515
ENSMUSG00000027506.16_8994494_9069545_2	chr3	-	2238	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	238	3841	-7	164	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	2582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTTTTCTT	NA	False	NA	-3	True	AATATA	-17	NA	9069545	8994493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ENSMUSG00000027509.12_172841917_172857532_1	chr2	+	1609	12	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	326.651961776187	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATGTTCCAAGTTTCTC	NA	False	NA	85	True	NA	NA	NA	172841916	172857532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_172842044_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ENSMUSG00000027509.12_172842050_172857532_1	chr2	+	1602	12	FSM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	140	0	133	0	multi-exon	FALSE	canonical	3	1013	junction_10	106.078950794457	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATGTTCCAAGTTTCTC	NA	False	NA	85	True	NA	NA	NA	172842049	172857532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ENSMUSG00000027510.18_172863706_172875979_1	chr2	+	1218	4	FSM	ENSMUSG00000027510.18	ENSMUST00000029014.16	1768	4	11	539	0	8	multi-exon	FALSE	canonical	3	657	junction_1	63.0766729200793	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTACTTAGAGACTGGC	NA	False	NA	NA	False	NA	NA	NA	172863705	172875979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_172864064_172864584_172864709_172865119_172865175_172875298
ENSMUSG00000027510.18_172863904_172876527_1	chr2	+	1568	4	FSM	ENSMUSG00000027510.18	ENSMUST00000029014.16	1768	4	209	-9	0	0	multi-exon	FALSE	canonical	3	657	junction_1	63.0766729200793	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGAGGTTTTTCTC	NA	False	NA	NA	False	AATAAA	-23	NA	172863903	172876527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_172864064_172864584_172864709_172865119_172865175_172875298
ENSMUSG00000027520.17_63239778_63342093_1	chr1	+	746	6	Fusion	ENSMUSG00000027520.17_ENSMUSG00000086730.3	novel	462	2	NA	NA	-89	7912	multi-exon	FALSE	canonical	3	22	junction_2	8.44748483277715	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATTCAGTCGGTGTTGT	NA	False	NA	NA	False	CATAAA	-22	NA	63239777	63342093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr1_+_63239834_63246673_63246774_63317089_63317143_63319925_63320037_63334074_63334206_63341798
ENSMUSG00000027523.21_174127049_174188537_1	chr2	+	1624	12	ISM	ENSMUSG00000027523.21	ENSMUST00000109096.9	2465	13	936	0	0	0	3prime_fragment	FALSE	canonical	3	9	junction_1	249.01252914145	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	6194	False	NA	15	True	AATAAA	-19	NA	174127048	174188537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_174127271_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_174127151_174188537_1	chr2	+	1522	12	ISM	ENSMUSG00000027523.21	ENSMUST00000109096.9	2465	13	1038	0	0	0	3prime_fragment	FALSE	canonical	3	9	junction_1	249.01252914145	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	6296	False	NA	15	True	AATAAA	-19	NA	174127150	174188537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_174127271_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_174172080_174188537_1	chr2	+	1550	12	FSM	ENSMUSG00000027523.21	ENSMUST00000109087.8	1716	12	198	-32	0	0	multi-exon	FALSE	canonical	3	678	junction_2	91.1435159288239	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	False	NA	15	True	AATAAA	-19	NA	174172079	174188537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027531.17_10379014_10396440_1	chr3	-	2128	9	FSM	ENSMUSG00000027531.17	ENSMUST00000065938.15	4185	9	59	1998	-8	0	multi-exon	FALSE	canonical	3	306	junction_8	38.1901083397259	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGGAATACCATTTTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	10396440	10379013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
ENSMUSG00000027531.17_10379134_10396440_1	chr3	-	2008	9	FSM	ENSMUSG00000027531.17	ENSMUST00000065938.15	4185	9	59	2118	-8	-120	multi-exon	FALSE	canonical	3	306	junction_8	38.1901083397259	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGGCACTGTAATGAC	NA	False	NA	-21	True	ATTAAA	-16	NA	10396440	10379133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
ENSMUSG00000027531.17_10380073_10396440_1	chr3	-	1069	9	FSM	ENSMUSG00000027531.17	ENSMUST00000065938.15	4185	9	59	3057	-8	105	multi-exon	FALSE	canonical	3	306	junction_8	38.1901083397259	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATGTAGTAATATTCT	NA	False	NA	NA	False	AAGAAA	-2	NA	10396440	10380072	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
ENSMUSG00000027533.11_10077665_10081395_1	chr3	+	606	5	NNC	ENSMUSG00000027533.11	novel	987	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	157.175658102646	1623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGATATGTGTGTGGGT	NA	False	NA	NA	False	AATAAA	-15	NA	10077664	10081395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_10077779_10080030_10080089_10080140_10080204_10080531_10080634_10081126
ENSMUSG00000027533.11_10077665_10081395_2	chr3	+	568	4	NNC	ENSMUSG00000027533.11	novel	987	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	170.267110414457	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGATATGTGTGTGGGT	NA	False	NA	NA	False	AATAAA	-15	NA	10077664	10081395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_10077779_10080030_10080176_10080593_10080634_10081126
ENSMUSG00000027536.7_10483206_10505147_1	chr3	+	2168	7	NIC	ENSMUSG00000027536.7	novel	4163	5	NA	NA	51188	11231	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACGGCCTCGAGTGGGAG	NA	False	NA	NA	False	NA	NA	NA	10483205	10505147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_10484284_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ENSMUSG00000027536.7_10483997_10505147_1	chr3	+	1497	8	NIC	ENSMUSG00000027536.7	novel	4163	5	NA	NA	51979	11231	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACGGCCTCGAGTGGGAG	NA	False	NA	NA	False	NA	NA	NA	10483996	10505147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ENSMUSG00000027540.14_167774292_167818881_1	chr2	+	1744	9	FSM	ENSMUSG00000027540.14	ENSMUST00000029053.8	4213	9	45	2424	0	2224	multi-exon	FALSE	canonical	3	103	junction_4	11.7997616501351	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTTTTTGTTATTTCT	1105	False	NA	NA	False	TATAAA	-1	NA	167774291	167818881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_167774477_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
ENSMUSG00000027547.18_168590252_168596586_1	chr2	-	2649	3	ISM	ENSMUSG00000027547.18	ENSMUST00000029061.12	5073	4	12535	0	1277	0	3prime_fragment	FALSE	canonical	3	593	junction_2	26	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGGCTTGTGTGTATGCT	5176	False	NA	-17	True	AATAAA	-22	NA	168596586	168590251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_168592381_168594373_168594661_168596353
ENSMUSG00000027547.18_168590252_168609037_1	chr2	-	4989	4	FSM	ENSMUSG00000027547.18	ENSMUST00000029061.12	5073	4	84	0	0	0	multi-exon	FALSE	canonical	3	532	junction_3	46.1808040928985	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGGCTTGTGTGTATGCT	NA	False	NA	-17	True	AATAAA	-22	NA	168609037	168590251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_168592381_168594373_168594661_168596353_168598721_168608831
ENSMUSG00000027547.18_168598332_168607310_1	chr2	-	686	2	FSM	ENSMUSG00000027547.18	ENSMUST00000137536.2	773	2	-144	231	-144	202	multi-exon	FALSE	canonical	3	69	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAGCCAACACCAATGT	NA	False	NA	NA	False	NA	NA	NA	168607310	168598331	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_168598721_168607013
ENSMUSG00000027550.15_14598883_14631163_1	chr3	+	3440	19	FSM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	0	2198	0	0	multi-exon	FALSE	canonical	3	53	junction_7	12.3057750168542	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTGATAATTGCACAC	NA	False	NA	NA	False	CATAAA	-26	NA	14598882	14631163	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ENSMUSG00000027551.16_168735251_168754553_1	chr2	-	2068	5	NIC	ENSMUSG00000027551.16	novel	2848	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	9.69535971483266	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGTGAGCGTCATTTCC	NA	False	NA	NA	False	AATAAA	-22	NA	168754553	168735250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_168736454_168741704_168741957_168748003_168748067_168748759_168748910_168754153
ENSMUSG00000027551.16_168776733_168797507_1	chr2	-	1307	6	FSM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	-298	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	185.215982031789	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTACTGTTGTTACCATT	NA	False	NA	-1	True	TATAAA	-19	NA	168797507	168776732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_168776860_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ENSMUSG00000027552.15_14643986_14671369_1	chr3	+	1497	8	FSM	ENSMUSG00000027552.15	ENSMUST00000165922.3	1751	8	255	-1	255	0	multi-exon	FALSE	non_canonical	0	0	junction_3	75.6598186837988	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATCTTTGGGGGAATGTG	2207	False	NA	30	True	AATAAA	-23	NA	14643985	14671369	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_14644084_14652369_14652480_14653199_14653362_14666059_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
ENSMUSG00000027552.15_14671349_14676314_1	chr3	+	525	5	NNC	ENSMUSG00000027552.15	novel	1779	8	NA	NA	27618	4945	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	15900	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAGGACACAGGAAGTTC	9470	False	NA	NA	False	NA	NA	NA	14671348	14676314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_14671469_14672009_14672136_14672236_14672354_14674600_14674718_14676269
ENSMUSG00000027552.15_14671349_14676314_2	chr3	+	1066	4	NNC	ENSMUSG00000027552.15	novel	1779	8	NA	NA	27618	4945	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAGGACACAGGAAGTTC	9470	False	NA	NA	False	NA	NA	NA	14671348	14676314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_14672136_14672236_14672354_14674600_14674718_14676269
ENSMUSG00000027552.15_14671349_14676314_3	chr3	+	697	4	NNC	ENSMUSG00000027552.15	novel	1779	8	NA	NA	27618	4945	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	7784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAGGACACAGGAAGTTC	9470	False	NA	NA	False	NA	NA	NA	14671348	14676314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_14671469_14672236_14672354_14674600_14674718_14675971
ENSMUSG00000027566.16_179678167_179684207_1	chr2	-	890	7	NNC	ENSMUSG00000027566.16	novel	914	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1666.80086959687	17259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	False	NA	-12	True	AATAAA	-17	NA	179684207	179678166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_179678367_179678730_179678785_179679171_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ENSMUSG00000027573.12_180352058_180360296_1	chr2	+	1277	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	148	230	148	-227	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGTGGGTATTGAGT	NA	False	NA	35	True	TATAAA	-26	NA	180352057	180360296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
ENSMUSG00000027573.12_180352058_180360526_1	chr2	+	1507	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	148	0	148	0	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCTTCTAAAAAGTTCT	NA	False	NA	18	True	AATAAA	-29	NA	180352057	180360526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
ENSMUSG00000027575.20_180609060_180623496_2	chr2	+	1858	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	33	823	0	3	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGCTAGTTCTTTCTTC	4067	False	NA	NA	False	TTTAAA	-8	NA	180609059	180623496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ENSMUSG00000027575.20_180609060_180624105_2	chr2	+	2467	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	33	214	0	1	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTATCAGTGGTTGGTG	4067	False	NA	21	True	NA	NA	NA	180609059	180624105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ENSMUSG00000027575.20_180609060_180624253_1	chr2	+	2683	14	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	65.799947842644	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGGTTTGTGTGTCT	4067	False	NA	-41	True	NA	NA	NA	180609059	180624253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_180609123_180609326_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ENSMUSG00000027581.13_180948252_180955968_1	chr2	-	1035	5	NNC	ENSMUSG00000027581.13	novel	1136	5	NA	NA	325	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	75.4867538048895	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACGTGTGGCTTTTCAT	NA	False	NA	-6	True	AATAAA	-16	NA	180955968	180948251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_180948617_180949008_180949201_180950513_180950690_180950939_180951036_180955762
ENSMUSG00000027581.13_180948252_180956080_1	chr2	-	923	5	FSM	ENSMUSG00000027581.13	ENSMUST00000103045.4	1136	5	213	0	213	0	multi-exon	FALSE	canonical	3	148	junction_1	19.0312243431683	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACGTGTGGCTTTTCAT	NA	False	NA	-6	True	AATAAA	-16	NA	180956080	180948251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_180948617_180949008_180949201_180950513_180950690_180950939_180951036_180955986
ENSMUSG00000027582.17_181000283_181007127_2	chr2	+	1720	8	NIC	ENSMUSG00000027582.17	novel	2293	7	NA	NA	-6438	-14485	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCACGGGCGGAATCGCA	NA	False	NA	NA	False	NA	NA	NA	181000282	181007127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ENSMUSG00000027582.17_181001108_181007127_2	chr2	+	887	8	NNC	ENSMUSG00000027582.17	novel	2293	7	NA	NA	-5613	-14485	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCACGGGCGGAATCGCA	NA	False	NA	NA	False	NA	NA	NA	181001107	181007127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006497_181007011
ENSMUSG00000027582.17_181023986_181025421_1	chr2	+	1001	5	FSM	ENSMUSG00000090077.10	ENSMUST00000048077.12	1959	5	958	0	-293	0	multi-exon	FALSE	canonical	3	53	junction_2	13.7386316640341	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGCTCTTGGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	181023985	181025421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
ENSMUSG00000027593.16_154633016_154709165_1	chr2	+	1523	10	NIC	ENSMUSG00000027593.16	novel	1802	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	57.8369355266262	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCTGAGGTGGAATGGT	NA	False	NA	7	True	AATAAA	-17	NA	154633015	154709165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_154633152_154662926_154663010_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ENSMUSG00000027593.16_154633016_154709165_2	chr2	+	1475	9	NIC	ENSMUSG00000027593.16	novel	1747	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	44.2965856472031	444	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCTGAGGTGGAATGGT	NA	False	NA	7	True	AATAAA	-17	NA	154633015	154709165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_154633152_154662926_154663010_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ENSMUSG00000027593.16_154633016_154709165_3	chr2	+	1392	8	NIC	ENSMUSG00000027593.16	novel	1709	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	53.0813776484863	381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCTGAGGTGGAATGGT	NA	False	NA	7	True	AATAAA	-17	NA	154633015	154709165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_154633152_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ENSMUSG00000027593.16_154705826_154709165_1	chr2	+	545	3	ISM	ENSMUSG00000027593.16	ENSMUST00000058089.13	1747	9	72749	16	72191	0	3prime_fragment	FALSE	canonical	3	166	junction_1	0	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCTGAGGTGGAATGGT	NA	False	NA	7	True	AATAAA	-17	NA	154705825	154709165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_154705970_154707827_154707877_154708813
ENSMUSG00000027593.16_154705928_154709165_1	chr2	+	443	3	ISM	ENSMUSG00000027593.16	ENSMUST00000058089.13	1747	9	72851	16	72293	0	3prime_fragment	FALSE	canonical	3	166	junction_1	0	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCTGAGGTGGAATGGT	NA	False	NA	7	True	AATAAA	-17	NA	154705927	154709165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_154705970_154707827_154707877_154708813
ENSMUSG00000027597.16_154901610_154916376_1	chr2	-	2122	10	FSM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	41	380	-9	-380	multi-exon	FALSE	canonical	0	0	junction_6	366.363443645113	12505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGCATGTATGTGGCTG	NA	False	NA	-20	True	ATTAAA	-21	NA	154916376	154901609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
ENSMUSG00000027597.16_154901610_154916376_2	chr2	-	2137	11	NNC	ENSMUSG00000027597.16	novel	2543	10	NA	NA	-9	-380	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	457.521627904081	12392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGCATGTATGTGGCTG	NA	False	NA	-20	True	ATTAAA	-21	NA	154916376	154901609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907337_154907404_154907507_154907607_154909242_154909319_154910747_154910939_154916284
ENSMUSG00000027597.16_154901610_154916376_3	chr2	-	2199	9	NIC	ENSMUSG00000027597.16	novel	2543	10	NA	NA	-9	-380	intron_retention	FALSE	canonical	0	0	junction_5	377.087854484867	12484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGCATGTATGTGGCTG	NA	False	NA	-20	True	ATTAAA	-21	NA	154916376	154901609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
ENSMUSG00000027601.14_19242429_19273374_1	chr3	+	1191	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	155	1607	0	-160	multi-exon	FALSE	canonical	3	831	junction_1	130.277568667669	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGTCTCCTTCCTTCTG	NA	False	NA	10	True	AGTAAA	-18	NA	19242428	19273374	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ENSMUSG00000027601.14_19242429_19273721_2	chr3	+	1538	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	155	1260	0	1	multi-exon	FALSE	canonical	3	831	junction_1	130.277568667669	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGAGTCTCTGTGTTGC	NA	False	NA	6	True	CATAAA	-17	NA	19242428	19273721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ENSMUSG00000027601.14_19242429_19274981_2	chr3	+	2798	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	155	0	0	0	multi-exon	FALSE	canonical	3	831	junction_1	130.277568667669	2177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTGTATATTTATCTC	NA	False	NA	50	True	AATAAA	-36	NA	19242428	19274981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ENSMUSG00000027601.14_19242429_19274981_3	chr3	+	2793	8	NNC	ENSMUSG00000027601.14	novel	2953	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_4	376.85898407435	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTGTATATTTATCTC	NA	False	NA	50	True	AATAAA	-36	NA	19242428	19274981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269639_19269868_19271343_19271588_19272325_19272486_19273201
ENSMUSG00000027605.19_155405109_155434650_1	chr2	+	1875	13	Fusion	ENSMUSG00000027605.19_ENSMUSG00000085010.2	novel	646	3	NA	NA	-5361	-2225	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCCGTTACCCGGGCTC	NA	False	NA	NA	False	NA	NA	NA	155405108	155434650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_+_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
ENSMUSG00000027605.19_155405109_155434650_2	chr2	+	1740	12	Fusion	ENSMUSG00000027605.19_ENSMUSG00000085010.2	novel	646	3	NA	NA	-5361	-2225	multi-exon	FALSE	non_canonical	0	0	junction_1	0	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCCGTTACCCGGGCTC	NA	False	NA	NA	False	NA	NA	NA	155405108	155434650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_+_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155434613
ENSMUSG00000027605.19_155405109_155434650_3	chr2	+	1869	13	Fusion	ENSMUSG00000027605.19_ENSMUSG00000085010.2	novel	646	3	NA	NA	-5361	-2225	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2106	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCCGTTACCCGGGCTC	NA	False	NA	NA	False	NA	NA	NA	155405108	155434650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_+_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414849_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
ENSMUSG00000027610.18_155405109_155434650_1	chr2	-	1785	13	NIC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_3	290.295347687297	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAATGACTCATTGTT	8430	False	NA	-10	True	AATAAA	-11	NA	155434650	155405108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409702_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
ENSMUSG00000027610.18_155405109_155434650_2	chr2	-	1934	13	NNC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	289.515243793637	2156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAATGACTCATTGTT	8430	False	NA	-10	True	AATAAA	-11	NA	155434650	155405108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434554
ENSMUSG00000027613.16_155661752_155668420_1	chr2	-	1075	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	425	0	-64	0	multi-exon	TRUE	canonical	3	1052	junction_5	244.745255316625	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGCTGTGTGTGTGTGT	25	False	NA	-3	True	ATTAAA	-22	NA	155668420	155661751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
ENSMUSG00000027613.16_155661752_155668595_1	chr2	-	931	6	NIC	ENSMUSG00000027613.16	novel	1500	6	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	639.961123819252	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGCTGTGTGTGTGTGT	NA	False	NA	-3	True	ATTAAA	-22	NA	155668595	155661751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668565
ENSMUSG00000027613.16_155661752_155668595_2	chr2	-	1250	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	250	0	-12	0	multi-exon	FALSE	canonical	3	1052	junction_5	244.745255316625	2546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGCTGTGTGTGTGTGT	NA	False	NA	-3	True	ATTAAA	-22	NA	155668595	155661751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
ENSMUSG00000027613.16_155661953_155668595_1	chr2	-	1049	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	250	201	-12	0	multi-exon	FALSE	canonical	3	1052	junction_5	244.745255316625	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACCAGATGCTGGCAGT	NA	False	NA	NA	False	NA	NA	NA	155668595	155661952	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
ENSMUSG00000027615.15_20050328_20089444_1	chr3	-	3762	17	FSM	ENSMUSG00000027615.15	ENSMUST00000012580.13	4016	17	35	219	0	0	multi-exon	FALSE	canonical	3	23	junction_7	9.33324032691755	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTAATAATTTCCTAT	NA	False	NA	NA	False	AATAAA	-21	NA	20089444	20050327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ENSMUSG00000027618.18_155965570_155976233_1	chr2	-	1562	9	NNC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	5496	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	81.7823903722556	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTGTCCTGATCCTTG	3222	False	NA	-13	True	AATAAA	-6	NA	155976233	155965569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976098
ENSMUSG00000027620.17_155989159_156022104_2	chr2	-	2811	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	383	junction_15	737.860411025805	1637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022104	155989158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ENSMUSG00000027620.17_155989860_156022104_1	chr2	-	2037	17	FSM	ENSMUSG00000027620.17	ENSMUST00000029149.13	2711	17	-17	691	0	0	multi-exon	FALSE	canonical	3	1090	junction_5	453.136943808105	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022104	155989859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ENSMUSG00000027620.17_155989860_156022104_2	chr2	-	2110	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	383	junction_15	737.860411025805	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022104	155989859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ENSMUSG00000027624.21_156263004_156382086_2	chr2	+	2820	21	FSM	ENSMUSG00000027624.21	ENSMUST00000109574.8	5904	21	36	3048	0	180	multi-exon	FALSE	canonical	3	16	junction_12	32.516303602962	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTCCTGCAAACTAAAAAA	7816	False	NA	NA	False	NA	NA	NA	156263003	156382086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352655_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ENSMUSG00000027634.15_156769265_156833982_1	chr2	-	2556	15	NIC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_13	42.7715812574811	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5908	False	NA	0	True	AATAAA	-22	NA	156833982	156769264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156811956_156812059_156833918
ENSMUSG00000027634.15_156770323_156833982_1	chr2	-	1534	16	FSM	ENSMUSG00000027634.15	ENSMUST00000072298.13	2586	16	-6	1058	-6	0	multi-exon	FALSE	canonical	3	138	junction_4	17.2644786258439	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTGTGTGCGAGCAC	5908	False	NA	-15	True	NA	NA	NA	156833982	156770322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ENSMUSG00000027634.15_156778506_156820592_1	chr2	-	188	2	NNC	ENSMUSG00000027634.15	novel	4023	11	NA	NA	13255	1990	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGCTATTGACACCTG	NA	False	NA	NA	False	NA	NA	NA	156820592	156778505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_156778558_156820456
ENSMUSG00000027635.16_156835212_156848995_2	chr2	-	4053	11	FSM	ENSMUSG00000082163.3_ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	0	-1973	0	881	multi-exon	FALSE	canonical	3	138	junction_10	28.450131809888	22437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAATCATGTAATAAAAT	8134	False	NA	NA	False	NA	NA	NA	156848995	156835211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
ENSMUSG00000027635.16_156837300_156848995_2	chr2	-	1965	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	0	115	0	-103	multi-exon	FALSE	canonical	3	138	junction_10	28.450131809888	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATGAGGTGGGAAAGCT	8134	False	NA	-121	True	AATAAA	-15	NA	156848995	156837299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
ENSMUSG00000027637.4_156705253_156715483_1	chr2	+	840	4	FSM	ENSMUSG00000027637.4	ENSMUST00000029165.4	1045	4	205	0	188	0	multi-exon	FALSE	canonical	3	1149	junction_1	99.8031395631754	333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGGCATGCCTGGTA	4847	False	NA	14	True	AATAAA	-18	NA	156705252	156715483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_156705338_156707176_156707281_156714257_156714388_156714962
ENSMUSG00000027639.17_156961484_156977075_1	chr2	-	1593	7	FSM	ENSMUSG00000027639.17	ENSMUST00000149313.8	1375	7	-218	0	-35	0	multi-exon	FALSE	canonical	1	2	junction_1	78.9887474405198	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTGTTGTTTTTAT	NA	False	NA	NA	False	AATAAA	-11	NA	156977075	156961483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_156962312_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ENSMUSG00000027642.16_157120937_157167977_1	chr2	+	2314	17	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	3	33	junction_1	578.05134665962	1120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	18	True	AATAAA	-19	NA	157120936	157167977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_157121034_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ENSMUSG00000027642.16_157120979_157167977_1	chr2	+	2494	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	0	262	0	1	multi-exon	FALSE	canonical	3	1870	junction_1	194.730412606121	3275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	18	True	AATAAA	-19	NA	157120978	157167977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ENSMUSG00000027642.16_157121231_157167674_1	chr2	+	1939	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	252	565	-115	19	multi-exon	FALSE	canonical	3	1870	junction_1	194.730412606121	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGAACATTTAACAAGG	NA	False	NA	NA	False	NA	NA	NA	157121230	157167674	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ENSMUSG00000027642.16_157121231_157167977_1	chr2	+	2290	18	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-115	1	combination_of_known_junctions	FALSE	canonical	3	59	junction_16	718.681058375563	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	18	True	AATAAA	-19	NA	157121230	157167977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157165142_157165191_157167630
ENSMUSG00000027642.16_157121231_157167977_2	chr2	+	2242	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	252	262	-115	1	multi-exon	FALSE	canonical	3	1870	junction_1	194.730412606121	2833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	18	True	AATAAA	-19	NA	157121230	157167977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ENSMUSG00000027642.16_157121231_157167977_3	chr2	+	2237	17	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-115	1	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_16	550.328751179693	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	18	True	AATAAA	-19	NA	157121230	157167977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167635
ENSMUSG00000027649.16_157579321_157733011_1	chr2	+	1913	16	NNC	ENSMUSG00000027649.16	novel	2442	16	NA	NA	0	-523	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	148.327954958673	1438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGGCTGACATTGTAT	NA	False	NA	14	True	ATTAAA	-14	NA	157579320	157733011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659680_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ENSMUSG00000027649.16_157579321_157733011_2	chr2	+	1919	16	FSM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	0	523	0	-523	multi-exon	FALSE	canonical	3	501	junction_9	43.3601968015214	1447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGGCTGACATTGTAT	NA	False	NA	14	True	ATTAAA	-14	NA	157579320	157733011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ENSMUSG00000027649.16_157660783_157733011_1	chr2	+	1075	8	NNC	ENSMUSG00000027649.16	novel	2442	16	NA	NA	28999	-523	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	207.296199400072	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGGCTGACATTGTAT	NA	False	NA	14	True	ATTAAA	-14	NA	157660782	157733011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_157660950_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ENSMUSG00000027651.17_157870719_157919240_1	chr2	+	3315	7	FSM	ENSMUSG00000027651.17	ENSMUST00000103123.10	4504	7	302	887	0	-887	multi-exon	FALSE	canonical	3	106	junction_3	28.7807806241133	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	10	True	AATAAA	-21	NA	157870718	157919240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157900571_157900748_157916849
ENSMUSG00000027667.14_32564684_32574892_1	chr3	+	1845	7	FSM	ENSMUSG00000027667.14	ENSMUST00000193287.6	2211	7	276	90	0	0	multi-exon	FALSE	canonical	3	56	junction_1	65.8012580089131	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAAGCTGAAATACTTT	3182	False	NA	22	True	AATAAA	-22	NA	32564683	32574892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_32564739_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ENSMUSG00000027669.15_32638147_32670684_1	chr3	-	2281	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	50	3666	-6	0	multi-exon	FALSE	canonical	3	60	junction_8	7.61253028131584	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTACTTTTCCATTTT	NA	False	NA	-2	True	TATAAA	-16	NA	32670684	32638146	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
ENSMUSG00000027671.15_32762914_32780922_1	chr3	+	1552	14	FSM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	258	200	0	0	multi-exon	FALSE	canonical	3	1234	junction_9	101.670310666418	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCACTTATTCTTATTAC	NA	False	NA	NA	False	ATTAAA	-21	NA	32762913	32780922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ENSMUSG00000027671.15_32762914_32781122_1	chr3	+	1656	13	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_11	397.893227930978	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGGATTTGTCTGTG	NA	False	NA	23	True	AATAAA	-20	NA	32762913	32781122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32779395_32779483_32780670
ENSMUSG00000027671.15_32762914_32781122_2	chr3	+	1746	14	NNC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	391.433188205091	4338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGGATTTGTCTGTG	NA	False	NA	23	True	AATAAA	-20	NA	32762913	32781122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_32763030_32766022_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ENSMUSG00000027671.15_32762914_32781122_3	chr3	+	1741	14	NNC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	392.639859377009	1338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGGATTTGTCTGTG	NA	False	NA	23	True	AATAAA	-20	NA	32762913	32781122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769575_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ENSMUSG00000027671.15_32762914_32781122_4	chr3	+	1745	14	NNC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	392.557461967984	3670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGGATTTGTCTGTG	NA	False	NA	23	True	AATAAA	-20	NA	32762913	32781122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772799_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ENSMUSG00000027673.13_32791225_32805380_1	chr3	+	658	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	86	335	0	1	multi-exon	FALSE	canonical	3	2813	junction_1	66.9226419084005	13026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTCTGTGGCTGGT	NA	False	NA	24	True	AATAAA	-26	NA	32791224	32805380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ENSMUSG00000027678.18_165834556_165912858_1	chr2	+	5228	23	FSM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	-1	2304	0	-532	multi-exon	FALSE	canonical	3	140	junction_19	38.5042929880864	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGTCCTGCACTCTGA	NA	False	NA	15	True	AATAAA	-15	NA	165834555	165912858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ENSMUSG00000027679.14_34074247_34124121_1	chr3	-	2674	16	NIC	ENSMUSG00000027679.14	novel	2499	6	NA	NA	10208	35922	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	2672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTGGGAAGAGATTCTA	NA	False	NA	NA	False	NA	NA	NA	34124121	34074246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ENSMUSG00000027679.14_34131503_34135459_1	chr3	-	568	6	NNC	ENSMUSG00000027679.14	novel	659	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1342.47398485036	13265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCAGTGTCTTGGTATA	NA	False	NA	-4	True	AATAAA	-44	NA	34135459	34131502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_34131674_34132923_34132995_34133358_34133434_34134232_34134307_34134379_34134432_34135334
ENSMUSG00000027680.16_34074247_34123487_1	chr3	+	2054	17	NNC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_13	307.253858549815	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAATGTTATTTTGTTT	4849	False	NA	13	True	ATTAAA	-16	NA	34074246	34123487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34116054_34116181_34118267_34118469_34122309_34122402_34123065
ENSMUSG00000027680.16_34074247_34123487_2	chr3	+	2213	18	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	384.426270035524	1822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAATGTTATTTTGTTT	4849	False	NA	13	True	ATTAAA	-16	NA	34074246	34123487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34119122_34119204_34122309_34122402_34123065
ENSMUSG00000027680.16_34074247_34123487_3	chr3	+	2040	16	FSM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	-10	984	0	1	multi-exon	FALSE	canonical	3	506	junction_15	191.49767622611	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAATGTTATTTTGTTT	4849	False	NA	13	True	ATTAAA	-16	NA	34074246	34123487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ENSMUSG00000027680.16_34074247_34124121_1	chr3	+	2761	15	FSM	ENSMUSG00000027680.16	ENSMUST00000198051.5	2127	15	-7	-627	0	-350	multi-exon	FALSE	canonical	3	506	junction_14	198.096296929405	2504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGATTTTTAACTTTC	4849	False	NA	10	True	AATAAA	-14	NA	34074246	34124121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34123065
ENSMUSG00000027680.16_34074247_34124121_2	chr3	+	2766	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-10	-627	0	-350	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	3490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGATTTTTAACTTTC	4849	False	NA	10	True	AATAAA	-14	NA	34074246	34124121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ENSMUSG00000027694.10_60784435_60786278_1	chr3	+	1599	3	NNC	ENSMUSG00000027694.10	novel	182	2	NA	NA	0	1270	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	920	439	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGACTACTTCTTCTT	NA	False	NA	NA	False	AATAAA	-35	NA	60784434	60786278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_60784468_60784586_60784736_60784861
ENSMUSG00000027698.15_27237153_27296740_1	chr3	+	2074	5	FSM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	39	2367	0	-2367	multi-exon	FALSE	canonical	3	107	junction_3	11.2333209693305	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTGTTGTTACTTAAGA	5607	False	NA	NA	False	AGTAAA	-14	NA	27237152	27296740	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349
ENSMUSG00000027702.8_30678416_30701908_1	chr3	-	1781	11	FSM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	110	0	110	0	multi-exon	TRUE	canonical	3	297	junction_6	40.0710618776194	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTCTTGAGTTTAGAT	NA	False	NA	-18	True	AATAAA	-19	NA	30701908	30678415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
ENSMUSG00000027702.8_30678416_30702018_1	chr3	-	1885	11	NNC	ENSMUSG00000027702.8	novel	1891	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	117.966774983467	951	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTCTTGAGTTTAGAT	NA	False	NA	-18	True	AATAAA	-19	NA	30702018	30678415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699459_30701818
ENSMUSG00000027702.8_30678708_30701908_1	chr3	-	1489	11	FSM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	110	292	110	-292	multi-exon	FALSE	canonical	3	297	junction_6	40.0710618776194	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGATTCTTAACATAGAGA	NA	False	NA	NA	False	TATAAA	-28	NA	30701908	30678707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
ENSMUSG00000027703.17_30678416_30701908_1	chr3	+	1625	10	Genic_Genomic	ENSMUSG00000027703.17	novel	2387	8	NA	NA	-20240	-24540	multi-exon	FALSE	non_canonical	0	0	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGGAAGGCCGCCGTGG	NA	False	NA	NA	False	NA	NA	NA	30678415	30701908	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_30679052_30684121_30684249_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
ENSMUSG00000027703.17_30678416_30702044_1	chr3	+	1761	10	NIC	ENSMUSG00000027703.17	novel	2092	6	NA	NA	-20240	-24404	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGAGGCGGGGCCACCGT	NA	False	NA	NA	False	NA	NA	NA	30678415	30702044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_30679052_30684121_30684249_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
ENSMUSG00000027703.17_30697173_30702044_1	chr3	+	794	4	NIC	ENSMUSG00000027703.17	novel	2092	6	NA	NA	-1483	-24404	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGAGGCGGGGCCACCGT	NA	False	NA	NA	False	NA	NA	NA	30697172	30702044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_30697498_30697596_30697719_30699343_30699465_30701818
ENSMUSG00000027703.17_30712892_30726583_1	chr3	+	765	3	NNC	ENSMUSG00000027703.17	novel	2387	8	NA	NA	10857	3	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	6.5	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTGGGAAGAATGATA	NA	False	NA	8	True	NA	NA	NA	30712891	30726583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_30713166_30714049_30714247_30726289
ENSMUSG00000027703.17_30713050_30726583_1	chr3	+	607	3	NNC	ENSMUSG00000027703.17	novel	2387	8	NA	NA	11015	3	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	6.5	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTGGGAAGAATGATA	NA	False	NA	8	True	NA	NA	NA	30713049	30726583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_30713166_30714049_30714247_30726289
ENSMUSG00000027706.9_30847485_30873893_1	chr3	+	1348	9	NNC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	0	-288	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_8	221.180356270624	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTACTTATTATTTAGAC	NA	False	NA	12	True	AATAAA	-15	NA	30847484	30873893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873724
ENSMUSG00000027706.9_30847485_30873893_2	chr3	+	1987	8	FSM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	461	1519	0	-288	multi-exon	FALSE	canonical	3	556	junction_4	88.1522338147515	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTACTTATTATTTAGAC	NA	False	NA	12	True	AATAAA	-15	NA	30847484	30873893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ENSMUSG00000027706.9_30847485_30874238_1	chr3	+	1693	9	NNC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	0	57	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_8	221.180356270624	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCAAGCCATTGGACTC	NA	False	NA	6	True	AATAAA	-16	NA	30847484	30874238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873724
ENSMUSG00000027706.9_30847485_30874238_2	chr3	+	2332	8	FSM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	461	1174	0	57	multi-exon	FALSE	canonical	3	556	junction_4	88.1522338147515	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCAAGCCATTGGACTC	NA	False	NA	6	True	AATAAA	-16	NA	30847484	30874238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ENSMUSG00000027706.9_30847485_30875412_1	chr3	+	3506	8	FSM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	461	0	0	0	multi-exon	FALSE	canonical	3	556	junction_4	88.1522338147515	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGCAGTAGTGATGGATT	NA	False	NA	NA	False	AATAAA	-21	NA	30847484	30875412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ENSMUSG00000027708.15_35947132_35986986_1	chr3	-	3467	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	635	878	-1	523	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATCTTCTCCCATATTA	NA	False	NA	NA	False	AATAAA	-23	NA	35986986	35947131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ENSMUSG00000027708.15_35947815_35986986_1	chr3	-	2784	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	635	1561	-1	-160	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGATATTTGTGTGTGGC	NA	False	NA	-5	True	CATAAA	-17	NA	35986986	35947814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ENSMUSG00000027708.15_35949459_35986986_1	chr3	-	1140	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	635	3205	-1	0	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCATTCTTGCATAAAGC	NA	False	NA	NA	False	NA	NA	NA	35986986	35949458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ENSMUSG00000027712.14_36503072_36529818_1	chr3	-	1506	13	FSM	ENSMUSG00000027712.14	ENSMUST00000029266.14	1731	13	225	0	-10	0	multi-exon	FALSE	canonical	3	95	junction_1	8.69985632065266	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTAGGTTTGTGTTT	NA	False	NA	3	True	AATAAA	-21	NA	36529818	36503071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_36503556_36504460_36504584_36504786_36504846_36506335_36506432_36507619_36507714_36511141_36511199_36511607_36511688_36514591_36514683_36516029_36516144_36518116_36518212_36519399_36519485_36529578_36529610_36529721
ENSMUSG00000027715.10_36620127_36622847_1	chr3	-	872	5	ISM	ENSMUSG00000027715.10	ENSMUST00000196316.2	2001	8	2853	0	-1853	0	3prime_fragment	FALSE	canonical	3	973	junction_1	56.4490921096168	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGTCAAAGTTAATCTG	NA	False	NA	-16	True	AATAAA	-17	NA	36622847	36620126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736
ENSMUSG00000027722.15_37474461_37633158_2	chr3	+	2789	16	FSM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	14	87	0	0	multi-exon	FALSE	canonical	3	115	junction_1	86.3305276249369	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAATGTTTGAAATACCT	NA	False	NA	-76	True	NA	NA	NA	37474460	37633158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ENSMUSG00000027739.10_51391634_51402601_1	chr3	+	2193	2	FSM	ENSMUSG00000027739.10	ENSMUST00000054387.8	3492	2	247	1052	247	-1052	multi-exon	FALSE	canonical	3	63	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGCTGACTTGTGAACT	NA	False	NA	NA	False	NA	NA	NA	51391633	51402601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_51392002_51400776
ENSMUSG00000027739.10_51391634_51403326_1	chr3	+	2918	2	FSM	ENSMUSG00000027739.10	ENSMUST00000054387.8	3492	2	247	327	247	-327	multi-exon	FALSE	canonical	3	63	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGCGTTTCTTTCTTTGG	NA	False	NA	3	True	AATAAA	-16	NA	51391633	51403326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_51392002_51400776
ENSMUSG00000027746.14_53764012_53771251_1	chr3	-	684	7	NNC	ENSMUSG00000027746.14	novel	4890	6	NA	NA	0	1231	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	130.148632980399	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTTCAGGAACAGTT	NA	False	NA	NA	False	AATAAA	-20	NA	53771251	53764011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_53764301_53765291_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
ENSMUSG00000027746.14_53764012_53771251_2	chr3	-	1204	7	NNC	ENSMUSG00000027746.14	novel	4890	6	NA	NA	0	1231	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	130.148632980399	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTTCAGGAACAGTT	NA	False	NA	NA	False	AATAAA	-20	NA	53771251	53764011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_53764301_53764771_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
ENSMUSG00000027746.14_53764674_53771251_1	chr3	-	1013	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	0	3877	0	569	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTTTTTGAGGATTCT	NA	False	NA	-3	True	AATAAA	-24	NA	53771251	53764673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
ENSMUSG00000027746.14_53764837_53771251_1	chr3	-	850	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	0	4040	0	406	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTATGAGTATAAGTTGC	NA	False	NA	NA	False	ATTAAA	-14	NA	53771251	53764836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
ENSMUSG00000027751.14_54600279_54636184_2	chr3	+	2826	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	139.954599570105	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ENSMUSG00000027751.14_54600279_54636184_3	chr3	+	2794	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_23	120.844519648158	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ENSMUSG00000027751.14_54600279_54636184_4	chr3	+	3064	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	226	junction_20	93.1009504905751	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ENSMUSG00000027751.14_54600279_54636184_5	chr3	+	2827	27	FSM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	51	-127	0	0	multi-exon	FALSE	canonical	3	259	junction_20	89.4210256174979	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ENSMUSG00000027751.14_54636103_54642456_1	chr3	+	1023	10	NIC	ENSMUSG00000027751.14	novel	3700	26	NA	NA	16444	6269	intron_retention	FALSE	non_canonical	0	0	junction_1	0	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCGCCTGCGCAGCCC	NA	False	NA	NA	False	NA	NA	NA	54636102	54642456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ENSMUSG00000027751.14_54636103_54642456_2	chr3	+	932	10	NNC	ENSMUSG00000027751.14	novel	3700	26	NA	NA	16444	6269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCGCCTGCGCAGCCC	NA	False	NA	NA	False	NA	NA	NA	54636102	54642456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641619_54642428
ENSMUSG00000027751.14_54636103_54642456_3	chr3	+	937	10	NNC	ENSMUSG00000027751.14	novel	3700	26	NA	NA	16444	6269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCGCCTGCGCAGCCC	NA	False	NA	NA	False	NA	NA	NA	54636102	54642456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_54636315_54636614_54636722_54637185_54637307_54638495_54638638_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ENSMUSG00000027751.14_54636103_54642456_4	chr3	+	931	11	NNC	ENSMUSG00000027751.14	novel	3700	26	NA	NA	16444	6269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCGCCTGCGCAGCCC	NA	False	NA	NA	False	NA	NA	NA	54636102	54642456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_54636308_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ENSMUSG00000027751.14_54636103_54642456_6	chr3	+	892	10	NIC	ENSMUSG00000027751.14	novel	3700	26	NA	NA	16444	6269	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCGCCTGCGCAGCCC	NA	False	NA	NA	False	NA	NA	NA	54636102	54642456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ENSMUSG00000027752.16_54636103_54642456_1	chr3	-	933	11	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_3	632.526118037825	4130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	-16	True	AATAAA	-23	NA	54642456	54636102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_54636315_54636614_54636722_54637185_54637302_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ENSMUSG00000027752.16_54636103_54642456_2	chr3	-	938	11	FSM	ENSMUSG00000027752.16	ENSMUST00000029316.16	1300	11	358	4	0	0	multi-exon	FALSE	canonical	3	1645	junction_10	187.140588863026	5302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	-16	True	AATAAA	-23	NA	54642456	54636102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ENSMUSG00000027752.16_54636103_54642456_3	chr3	-	950	11	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_6	627.010334843055	4653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	-16	True	AATAAA	-23	NA	54642456	54636102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639651_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ENSMUSG00000027774.17_67337449_67382401_1	chr3	+	2590	18	NNC	ENSMUSG00000027774.17	novel	4078	18	NA	NA	0	264	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	178.038835621949	1228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATATATAATATTATATA	NA	False	NA	NA	False	AGTAAA	-31	NA	67337448	67382401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382058
ENSMUSG00000027774.17_67357292_67382401_1	chr3	+	1459	10	NNC	ENSMUSG00000027774.17	novel	924	7	NA	NA	-6520	264	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	155.305433832103	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATATATAATATTATATA	NA	False	NA	NA	False	AGTAAA	-31	NA	67357291	67382401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_67357498_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ENSMUSG00000027774.17_67365331_67371115_1	chr3	+	968	6	Genic_Genomic	ENSMUSG00000027774.17	novel	1971	14	NA	NA	1519	4977	multi-exon	FALSE	non_canonical	0	0	junction_1	0	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAGTGCTGGCCAGCC	NA	False	NA	NA	False	NA	NA	NA	67365330	67371115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_67365661_67365926_67365990_67368254_67368392_67368644_67368823_67369691_67369755_67370918
ENSMUSG00000027775.10_67490074_67510422_1	chr3	+	1863	16	FSM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	0	1148	0	-1148	multi-exon	TRUE	canonical	3	661	junction_4	69.2886394407882	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCACTGTGTCCTAGAG	NA	False	NA	6	True	AATAAA	-17	NA	67490073	67510422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ENSMUSG00000027775.10_67490074_67510574_1	chr3	+	2015	16	FSM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	0	996	0	-996	multi-exon	FALSE	canonical	3	661	junction_4	69.2886394407882	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGCTACCTATATACAT	NA	False	NA	NA	False	AATAAA	-17	NA	67490073	67510574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ENSMUSG00000027787.15_69629365_69656380_1	chr3	+	1530	14	NIC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	260.373218702983	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTGAAGGTTTCATAA	NA	False	NA	16	True	AATAAA	-26	NA	69629364	69656380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_69629456_69629741_69629800_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
ENSMUSG00000027787.15_69629416_69656380_1	chr3	+	1711	16	FSM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	98	7326	0	5	multi-exon	FALSE	canonical	3	839	junction_3	66.7311687960648	3567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTGAAGGTTTCATAA	NA	False	NA	16	True	AATAAA	-26	NA	69629415	69656380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
ENSMUSG00000027794.5_55089449_55115270_1	chr3	+	1293	10	ISM	ENSMUSG00000027794.5	ENSMUST00000029369.5	2364	11	0	2108	0	-2108	5prime_fragment	FALSE	canonical	3	238	junction_8	30.2267153522783	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGAGTAAGAGACTTC	NA	False	NA	NA	False	NA	NA	NA	55089448	55115270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013
ENSMUSG00000027794.5_55089449_55117378_1	chr3	+	2359	11	NNC	ENSMUSG00000027794.5	novel	2364	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	76.3681216215248	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTGCAAGGAATCTGAT	NA	False	NA	20	True	AATAAA	-22	NA	55089448	55117378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_55089536_55096546_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
ENSMUSG00000027796.3_54693632_54705041_1	chr3	+	853	4	ISM	ENSMUSG00000027796.3	ENSMUST00000029371.3	5368	6	30629	3637	30629	-3637	3prime_fragment	FALSE	canonical	3	10	junction_1	2.62466929133727	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTATATCACCGTTTGT	537	False	NA	NA	False	AATACA	-20	NA	54693631	54705041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_54693743_54696606_54696829_54701652_54701910_54704778
ENSMUSG00000027803.15_57366141_57483249_1	chr3	-	1626	7	FSM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	0	3071	0	-2938	multi-exon	TRUE	canonical	3	192	junction_3	19.06494747494	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGCCTGCATTTCTGTG	NA	False	NA	-3	True	AATAAA	-19	NA	57483249	57366140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483021
ENSMUSG00000027804.14_79498672_79510584_1	chr3	+	1379	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	0	373	0	1	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	6140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATCTCATTTTAAAATG	NA	False	NA	17	True	AATAAA	-16	NA	79498671	79510584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ENSMUSG00000027804.14_79498672_79511121_1	chr3	+	1916	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	0	-164	0	164	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	8705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTATTTATGACAAATAC	NA	False	NA	NA	False	AATAAA	-25	NA	79498671	79511121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ENSMUSG00000027805.17_57749326_57754982_1	chr3	-	1814	3	FSM	ENSMUSG00000027805.17	ENSMUST00000066882.10	2342	3	518	10	-12	0	multi-exon	FALSE	canonical	3	22	junction_1	7	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTCCATTGGACTCCT	NA	False	NA	-6	True	AATAAA	-13	NA	57754982	57749325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_57750736_57752594_57752788_57754771
ENSMUSG00000027808.9_58429390_58433174_1	chr3	-	2320	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	139	2152	139	-2152	multi-exon	FALSE	canonical	3	847	junction_1	36.5	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGCAGAGTTTTTAT	NA	False	NA	18	True	AATAAA	-36	NA	58433174	58429389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_58431290_58432503_58432580_58432830
ENSMUSG00000027808.9_58429390_58433313_1	chr3	-	2459	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	0	2152	0	-2152	multi-exon	FALSE	canonical	3	847	junction_1	36.5	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGCAGAGTTTTTAT	NA	False	NA	18	True	AATAAA	-36	NA	58433313	58429389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_58431290_58432503_58432580_58432830
ENSMUSG00000027808.9_58431011_58433174_1	chr3	-	699	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	139	3773	139	-3773	multi-exon	FALSE	canonical	3	847	junction_1	36.5	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCAGTAGTAGACCATAC	NA	False	NA	-16	True	AATAAA	-22	NA	58433174	58431010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_58431290_58432503_58432580_58432830
ENSMUSG00000027810.15_58433464_58464922_1	chr3	+	2077	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	222	0	0	0	multi-exon	FALSE	canonical	3	611	junction_6	73.3195163601748	2795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58433463	58464922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ENSMUSG00000027820.13_63202982_63247563_1	chr3	+	912	9	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	0	-4477	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	55.9797675504284	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAATGTAACACATATT	NA	False	NA	NA	False	AATAAA	-23	NA	63202981	63247563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436
ENSMUSG00000027820.13_63203630_63247563_1	chr3	+	971	9	ISM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	114	41481	114	-4477	5prime_fragment	FALSE	canonical	3	117	junction_1	104.818593293366	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAATGTAACACATATT	NA	False	NA	NA	False	AATAAA	-23	NA	63203629	63247563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436
ENSMUSG00000027822.17_63849751_63872087_1	chr3	-	3048	6	FSM	ENSMUSG00000027822.17	ENSMUST00000029402.15	3150	6	102	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	11.3666177907063	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAAGCTGTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-24	NA	63872087	63849750	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_63850838_63851986_63852203_63854989_63855108_63855492_63855678_63861234_63861426_63870836
ENSMUSG00000027823.10_63883527_63924174_1	chr3	+	2273	16	NNC	ENSMUSG00000027823.10	novel	8105	16	NA	NA	0	-5826	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	308.751852895925	3074	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGTAACTGAGGCTCA	NA	False	NA	16	True	AATAAA	-16	NA	63883526	63924174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923013_63924053
ENSMUSG00000027823.10_63883527_63924174_2	chr3	+	2221	16	NNC	ENSMUSG00000027823.10	novel	8105	16	NA	NA	0	-5826	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_14	298.521646339647	2936	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGTAACTGAGGCTCA	NA	False	NA	16	True	AATAAA	-16	NA	63883526	63924174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922903_63923019_63924053
ENSMUSG00000027823.10_63883527_63924174_3	chr3	+	2273	16	NNC	ENSMUSG00000027823.10	novel	8105	16	NA	NA	0	-5826	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	310.654892480743	3077	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGTAACTGAGGCTCA	NA	False	NA	16	True	AATAAA	-16	NA	63883526	63924174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900758_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ENSMUSG00000027834.16_75464854_75548305_1	chr3	+	1594	9	FSM	ENSMUSG00000027834.16	ENSMUST00000029423.9	4091	9	0	2497	0	-2497	multi-exon	FALSE	canonical	3	8	junction_2	2.1650635094611	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTTTTTCATTTTGAA	NA	False	NA	NA	False	AATAAA	-22	NA	75464853	75548305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_75464950_75520386_75520655_75521760_75521992_75523874_75524070_75526425_75526631_75531165_75531264_75545224_75545312_75547555_75547646_75547981
ENSMUSG00000027835.12_75424280_75464118_1	chr3	-	1399	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	45	483	0	303	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	3652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTCCTTAATCACTT	NA	False	NA	-14	True	AATAAA	-17	NA	75464118	75424279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
ENSMUSG00000027845.16_103709949_103716697_2	chr3	-	2254	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	63	2028	-3	252	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAGTATATTGTTATTA	NA	False	NA	NA	False	AATAGA	-15	NA	103716697	103709948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
ENSMUSG00000027845.16_103710065_103716697_1	chr3	-	1972	3	FSM	ENSMUSG00000027845.16	ENSMUST00000063502.13	4113	3	-3	2144	-3	136	multi-exon	FALSE	canonical	3	26	junction_2	24.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTTGTTCCACTTGGT	NA	False	NA	NA	False	NA	NA	NA	103716697	103710064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_103711372_103714709_103714893_103716215
ENSMUSG00000027845.16_103710065_103716697_2	chr3	-	2138	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	63	2144	-3	136	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTTGTTCCACTTGGT	NA	False	NA	NA	False	NA	NA	NA	103716697	103710064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
ENSMUSG00000027852.15_102965664_102971971_1	chr3	+	1106	6	FSM	ENSMUSG00000027852.15	ENSMUST00000200069.5	831	6	-19	-256	0	256	multi-exon	FALSE	canonical	3	47	junction_5	301.169453962383	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTAGTGTTGCTGATT	NA	False	NA	8	True	CATAAA	-18	NA	102965663	102971971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971549
ENSMUSG00000027854.13_102903046_102909531_1	chr3	+	1109	5	FSM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	22	6244	0	21	multi-exon	FALSE	canonical	3	364	junction_4	22.0609949911603	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTTTTTTCTTCCACT	NA	False	NA	22	True	AATACA	-18	NA	102903045	102909531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_102903284_102903471_102903578_102904558_102904702_102905805_102905920_102909023
ENSMUSG00000027854.13_102903046_102910797_1	chr3	+	2375	5	FSM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	22	4978	0	1287	multi-exon	FALSE	canonical	3	364	junction_4	22.0609949911603	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCTCATTTTACTGAG	NA	False	NA	18	True	AATAAA	-15	NA	102903045	102910797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_102903284_102903471_102903578_102904558_102904702_102905805_102905920_102909023
ENSMUSG00000027858.14_102642273_102678546_1	chr3	+	2994	8	FSM	ENSMUSG00000027858.14	ENSMUST00000029451.12	4484	8	428	1062	0	-1062	multi-exon	FALSE	canonical	3	42	junction_1	8.2065180664829	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCTTGAGTTATCTTAA	NA	False	NA	4	True	ATTAAA	-16	NA	102642272	102678546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_102642382_102657073_102657177_102664608_102664707_102665472_102665548_102666625_102666725_102668212_102668285_102672500_102672585_102676192
ENSMUSG00000027860.16_102070502_102073710_2	chr3	-	678	3	NNC	ENSMUSG00000027860.16	novel	617	3	NA	NA	-454	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	154	497	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCTATGTACTTGTGTG	NA	False	NA	-11	True	NA	NA	NA	102073710	102070501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_102070850_102072670_102072804_102073513
ENSMUSG00000027881.15_108810904_108819055_1	chr3	-	2257	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	-12	781	-12	-441	multi-exon	FALSE	canonical	3	234	junction_4	114.013332553697	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTTGTAGGTGTGA	6838	False	NA	-2	True	AATAAA	-16	NA	108819055	108810903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ENSMUSG00000027883.16_108561265_108586156_1	chr3	-	2007	12	NIC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	23673	24689	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGACTCATCGACTCGCT	NA	False	NA	NA	False	NA	NA	NA	108586156	108561264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ENSMUSG00000027883.16_108586407_108629477_1	chr3	-	2593	14	NIC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	-45	-453	combination_of_known_junctions	FALSE	canonical	3	40	junction_13	22.5826555427157	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGGTTATCTGTCTCCT	NA	False	NA	-3	True	AATAAA	-15	NA	108629477	108586406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108629356
ENSMUSG00000027884.17_108561265_108586156_1	chr3	+	2078	12	NIC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	23.1716555264122	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6632	False	NA	6	True	AATAAA	-18	NA	108561264	108586156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_108561368_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ENSMUSG00000027890.18_107947726_107952182_1	chr3	-	1454	8	NNC	ENSMUSG00000027890.18	novel	1462	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	44.6533130612605	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGATGTCTTTTCCT	NA	False	NA	-6	True	AATAAA	-18	NA	107952182	107947725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950850_107950918_107951210_107951276_107951668_107951745_107952160
ENSMUSG00000027890.18_107947726_107952182_2	chr3	-	1662	8	NNC	ENSMUSG00000027890.18	novel	1707	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	40.2329948866726	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGATGTCTTTTCCT	NA	False	NA	-6	True	AATAAA	-18	NA	107952182	107947725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950850_107950918_107951210_107951276_107951668_107951745_107951952
ENSMUSG00000027893.15_107570436_107603632_1	chr3	-	3619	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	244	0	189	0	multi-exon	FALSE	canonical	3	702	junction_5	41.8762593094226	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTAGTCGTGTGTCTTT	NA	False	NA	-4	True	ATTAAA	-23	NA	107603632	107570435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ENSMUSG00000027900.16_106455197_106481247_1	chr3	+	1161	8	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	0	-914	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	42.6375325701836	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTAGTGTTTGCTACT	NA	False	NA	6	True	AATAAA	-15	NA	106455196	106481247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_106455237_106459471_106459597_106462479_106462625_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ENSMUSG00000027901.13_106410299_106455059_1	chr3	+	2032	9	NIC	ENSMUSG00000027901.13	novel	4050	12	NA	NA	9808	44713	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	970	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGGCAGCACGTTCACGA	NA	False	NA	NA	False	NA	NA	NA	106410298	106455059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505_106446920_106454995
ENSMUSG00000027901.13_106410299_106455059_2	chr3	+	2025	9	NNC	ENSMUSG00000027901.13	novel	4050	12	NA	NA	9808	44713	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	940	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGGCAGCACGTTCACGA	NA	False	NA	NA	False	NA	NA	NA	106410298	106455059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505_106446920_106455002
ENSMUSG00000027905.16_105585586_105594768_1	chr3	-	2783	11	FSM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	122	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	22.5302019520465	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTTTATTCTGTCGAG	NA	False	NA	0	True	AATAAA	-23	NA	105594768	105585585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
ENSMUSG00000027931.13_90357898_90362404_1	chr3	-	964	3	ISM	ENSMUSG00000027931.13	ENSMUST00000029540.13	4066	22	10769	0	2379	0	intron_retention	FALSE	canonical	3	97	junction_2	38	1157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	90362404	90357897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_90358490_90358612_90358705_90362124
ENSMUSG00000027931.13_90357898_90362404_2	chr3	-	832	4	NNC	ENSMUSG00000027931.13	novel	4066	22	NA	NA	2379	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	63.2824356884805	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	90362404	90357897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_90358490_90358612_90358705_90362124_90362224_90362355
ENSMUSG00000027932.15_90292548_90296564_1	chr3	-	1587	10	FSM	ENSMUSG00000027932.15	ENSMUST00000029541.12	2259	10	670	2	-276	0	multi-exon	FALSE	canonical	3	73	junction_6	21.4101625806157	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGCCCATCTTCGAGA	NA	False	NA	-19	True	AATAAA	-12	NA	90296564	90292547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996_90296207_90296478
ENSMUSG00000027935.15_90121002_90133278_1	chr3	+	962	8	NNC	ENSMUSG00000027935.15	novel	1415	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	7.54036755451237	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCATTTGCATTACTTT	NA	False	NA	8	True	ATTAAA	-20	NA	90121001	90133278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_90121091_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
ENSMUSG00000027935.15_90121002_90133278_2	chr3	+	1001	8	FSM	ENSMUSG00000027935.15	ENSMUST00000107373.8	1415	8	0	414	0	2	multi-exon	FALSE	canonical	2	6	junction_1	8.56666534317997	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCATTTGCATTACTTT	NA	False	NA	8	True	ATTAAA	-20	NA	90121001	90133278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_90121130_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
ENSMUSG00000027935.15_90128196_90133278_1	chr3	+	1007	8	FSM	ENSMUSG00000027935.15	ENSMUST00000065418.7	1107	8	102	-2	102	2	multi-exon	FALSE	canonical	3	20	junction_1	3.88613443106727	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCATTTGCATTACTTT	NA	False	NA	8	True	ATTAAA	-20	NA	90128195	90133278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_90128330_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
ENSMUSG00000027937.16_90138904_90143145_1	chr3	+	1296	4	FSM	ENSMUSG00000027937.16	ENSMUST00000157045.8	840	4	-37	-419	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	162.68852312181	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90138903	90143145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_90139348_90139501_90139819_90141229_90141310_90142690
ENSMUSG00000027937.16_90138904_90143145_2	chr3	+	1450	3	NIC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_2	180	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90138903	90143145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_90139819_90141229_90141310_90142690
ENSMUSG00000027937.16_90139280_90143145_1	chr3	+	725	5	FSM	ENSMUSG00000027937.16	ENSMUST00000029546.15	1101	5	376	0	-74	0	multi-exon	FALSE	canonical	3	314	junction_4	18.2260116317312	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90139279	90143145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_90139348_90139501_90139540_90139735_90139819_90141229_90141310_90142689
ENSMUSG00000027937.16_90139280_90143145_2	chr3	+	920	4	FSM	ENSMUSG00000027937.16	ENSMUST00000157045.8	840	4	339	-419	-74	0	multi-exon	FALSE	non_canonical	0	0	junction_3	162.68852312181	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90139279	90143145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_90139348_90139501_90139819_90141229_90141310_90142690
ENSMUSG00000027940.19_89986972_90007911_1	chr3	+	1808	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	125	297	0	-292	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	2513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTTTGAAGTTTTGTT	NA	False	NA	9	True	TTTAAA	-6	NA	89986971	90007911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ENSMUSG00000027940.19_89986972_90008203_1	chr3	+	2100	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	125	5	0	0	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	7052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCAGACCGGCTTGACTT	NA	False	NA	13	True	AATAAA	-16	NA	89986971	90008203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ENSMUSG00000027942.18_89960121_89973183_1	chr3	+	1825	10	NNC	ENSMUSG00000118504.2	novel	1545	10	NA	NA	-90	4	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	189.742580654897	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGCTGGCAGGATGG	NA	False	NA	11	True	AATAAA	-20	NA	89960120	89973183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944_89969426_89970515_89970557_89971731_89971862_89972816
ENSMUSG00000027944.14_89902763_89905945_1	chr3	-	1047	7	NNC	ENSMUSG00000027944.14	novel	1139	7	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_6	661.327137907808	5453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7249	False	NA	NA	False	AATAAA	-16	NA	89905945	89902762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905288_89905834
ENSMUSG00000027944.14_89902763_89905945_2	chr3	-	1064	7	NNC	ENSMUSG00000027944.14	novel	1139	7	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	671.873913435814	9926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7249	False	NA	NA	False	AATAAA	-16	NA	89905945	89902762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905305_89905834
ENSMUSG00000027950.8_89622329_89658713_1	chr3	-	3869	15	NIC	ENSMUSG00000027950.8	novel	3482	6	NA	NA	11995	31173	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCGCCGGCGTGGGAGGG	8570	False	NA	NA	False	NA	NA	NA	89658713	89622328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ENSMUSG00000027950.8_89622329_89658713_2	chr3	-	3791	15	NIC	ENSMUSG00000027950.8	novel	3482	6	NA	NA	11995	31173	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCGCCGGCGTGGGAGGG	8570	False	NA	NA	False	NA	NA	NA	89658713	89622328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ENSMUSG00000027952.17_89366425_89402839_1	chr3	+	999	5	NNC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	0	26519	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_4	230.312152306386	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTGTGGCTGTGTTGTC	140	False	NA	NA	False	NA	NA	NA	89366424	89402839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89402534
ENSMUSG00000027952.17_89366638_89376316_1	chr3	+	977	5	FSM	ENSMUSG00000027952.17	ENSMUST00000029564.12	1194	5	213	4	0	0	multi-exon	FALSE	canonical	3	519	junction_1	43.1878165690279	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGAGCTGGAGACTGAT	353	False	NA	17	True	AATAAA	-16	NA	89366637	89376316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89375820
ENSMUSG00000027952.17_89366638_89402839_1	chr3	+	786	5	NNC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	0	26519	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_4	230.312152306386	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTGTGGCTGTGTTGTC	353	False	NA	NA	False	NA	NA	NA	89366637	89402839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89402534
ENSMUSG00000027953.14_89175555_89177847_1	chr3	-	860	6	NIC	ENSMUSG00000027953.14	novel	1022	6	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	58.1425833619388	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCAGAGTGATGTGTT	NA	False	NA	-33	True	AATAAA	-15	NA	89177847	89175554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89177822
ENSMUSG00000027959.15_116388659_116422672_1	chr3	+	2278	17	FSM	ENSMUSG00000027959.15	ENSMUST00000198311.5	2404	17	2	124	0	-109	multi-exon	FALSE	canonical	3	24	junction_15	13.4290671213603	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTGTATCAGATTCTT	NA	False	NA	NA	False	AAAAAG	-4	NA	116388658	116422672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356
ENSMUSG00000027961.8_116374743_116388536_1	chr3	+	1866	11	NIC	ENSMUSG00000027961.8	novel	3087	9	NA	NA	18116	11753	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	473	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATGACGCATCAGCCCG	NA	False	NA	NA	False	NA	NA	NA	116374742	116388536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ENSMUSG00000027963.15_115801127_115821986_1	chr3	+	2304	5	FSM	ENSMUSG00000027963.15	ENSMUST00000029575.12	3000	5	16	680	0	-623	multi-exon	FALSE	canonical	3	53	junction_4	7.08872343937891	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGGAAGAATGGTTAAG	10	False	NA	NA	False	AATAAA	-16	NA	115801126	115821986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_115801532_115804270_115804346_115817655_115818084_115818973_115819045_115820661
ENSMUSG00000027968.12_127330363_127346907_1	chr3	-	2025	13	NNC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	248.488136873104	1969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	False	NA	-1	True	AATAAA	-17	NA	127346907	127330362	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340048_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
ENSMUSG00000027968.12_127330363_127346998_1	chr3	-	2115	13	NNC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	248.045134781735	1984	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	False	NA	-1	True	AATAAA	-17	NA	127346998	127330362	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339614_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
ENSMUSG00000027984.9_131027068_131065697_1	chr3	-	1730	8	NNC	ENSMUSG00000027984.9	novel	1789	8	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	270.514702154306	4333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCCTGTCTTCTCTGA	NA	False	NA	NA	False	AATAAA	-43	NA	131065697	131027067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131038814_131038936_131042064_131042223_131043451_131043581_131065524
ENSMUSG00000027995.11_83743579_83748645_1	chr3	-	2968	2	ISM	ENSMUSG00000027995.11	ENSMUST00000029623.11	3014	3	429	0	429	0	3prime_fragment	FALSE	canonical	3	36	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGGTTTCTCTGTTTTTC	NA	False	NA	-1	True	TATAAA	-16	NA	83748645	83743578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_83746097_83748195
ENSMUSG00000027995.11_83743579_83748891_1	chr3	-	2831	3	FSM	ENSMUSG00000027995.11	ENSMUST00000029623.11	3014	3	183	0	183	0	multi-exon	FALSE	canonical	3	25	junction_2	5.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGGTTTCTCTGTTTTTC	NA	False	NA	-1	True	TATAAA	-16	NA	83748891	83743578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_83746097_83748195_83748444_83748826
ENSMUSG00000027997.10_129695107_129707599_1	chr3	+	1270	7	FSM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	33	153	0	-153	multi-exon	FALSE	canonical	3	125	junction_5	8.11206234909197	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACACTTTCTAATTCCTA	NA	False	NA	7	True	AATAAA	-16	NA	129695106	129707599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_129695156_129699114_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
ENSMUSG00000027998.12_82962862_82979479_1	chr3	+	1635	15	FSM	ENSMUSG00000027998.12	ENSMUST00000150268.8	1851	15	33	183	0	0	multi-exon	FALSE	canonical	3	670	junction_6	49.0312790627637	1960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCATGGCTGTCCTGTTC	NA	False	NA	-93	True	NA	NA	NA	82962861	82979479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
ENSMUSG00000028010.17_129618568_129624784_1	chr3	-	1003	7	FSM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	261	7	-203	0	multi-exon	FALSE	canonical	3	868	junction_6	342.204130113397	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTACGTTTATTGAACG	NA	False	NA	-8	True	AATAAA	-15	NA	129624784	129618567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624766
ENSMUSG00000028010.17_129618568_129624784_2	chr3	-	1029	7	NNC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-203	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_6	620.417444593199	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTACGTTTATTGAACG	NA	False	NA	-8	True	AATAAA	-15	NA	129624784	129618567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624740
ENSMUSG00000028016.10_132797699_132815307_1	chr3	+	1561	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	98	1442	0	-1442	multi-exon	FALSE	canonical	3	154	junction_1	13.0213499897497	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTATTGTTTGTTACATT	NA	False	NA	8	True	AATAAA	-14	NA	132797698	132815307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
ENSMUSG00000028019.10_80944331_81121341_1	chr3	+	2966	7	FSM	ENSMUSG00000028019.10	ENSMUST00000129285.8	2818	7	-148	0	-148	0	multi-exon	FALSE	canonical	3	14	junction_2	32.8705372974374	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAAGTGTTCGTCTAAGT	NA	False	NA	40	True	AATAAA	-25	NA	80944330	81121341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_80944862_81038324_81038384_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
ENSMUSG00000028019.10_80944331_81121341_2	chr3	+	2907	6	FSM	ENSMUSG00000028019.10	ENSMUST00000029652.4	3521	6	608	6	-148	0	multi-exon	FALSE	canonical	3	60	junction_1	10.870142593361	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAAGTGTTCGTCTAAGT	NA	False	NA	40	True	AATAAA	-25	NA	80944330	81121341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
ENSMUSG00000028019.10_80944479_81121341_1	chr3	+	2759	6	FSM	ENSMUSG00000028019.10	ENSMUST00000029652.4	3521	6	756	6	0	0	multi-exon	FALSE	canonical	3	60	junction_1	10.870142593361	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAAGTGTTCGTCTAAGT	NA	False	NA	40	True	AATAAA	-25	NA	80944478	81121341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
ENSMUSG00000028019.10_80944715_81121341_1	chr3	+	2523	6	FSM	ENSMUSG00000028019.10	ENSMUST00000029652.4	3521	6	992	6	-16	0	multi-exon	FALSE	canonical	3	60	junction_1	10.870142593361	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAAGTGTTCGTCTAAGT	NA	False	NA	40	True	AATAAA	-25	NA	80944714	81121341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
ENSMUSG00000028029.12_132366260_132389611_1	chr3	-	1330	8	NNC	ENSMUSG00000028029.12	novel	1126	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	421.08828876944	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTTGCTCATTTTTTG	NA	False	NA	-16	True	AATAAA	-31	NA	132389611	132366259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132384490_132384729_132389553
ENSMUSG00000028029.12_132366260_132389611_2	chr3	-	1205	8	NNC	ENSMUSG00000028029.12	novel	1126	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	420.18387617318	1222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTTGCTCATTTTTTG	NA	False	NA	-16	True	AATAAA	-31	NA	132389611	132366259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132383016_132383130_132389553
ENSMUSG00000028029.12_132366260_132389611_3	chr3	-	1081	7	NNC	ENSMUSG00000028029.12	novel	1126	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	349.68338854201	5048	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTTGCTCATTTTTTG	NA	False	NA	-16	True	AATAAA	-31	NA	132389611	132366259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_132366503_132373145_132373315_132377739_132377938_132379725_132379891_132380509_132380624_132382765_132382900_132389553
ENSMUSG00000028029.12_132366260_132389611_4	chr3	-	1087	7	NNC	ENSMUSG00000028029.12	novel	1126	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	348.360764470143	5027	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTTGCTCATTTTTTG	NA	False	NA	-16	True	AATAAA	-31	NA	132389611	132366259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_132366498_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389553
ENSMUSG00000028029.12_132366260_132389611_5	chr3	-	1078	7	NNC	ENSMUSG00000028029.12	novel	1126	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	349.68338854201	4339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTTGCTCATTTTTTG	NA	False	NA	-16	True	AATAAA	-31	NA	132389611	132366259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_132366503_132373145_132373315_132377739_132377935_132379725_132379891_132380509_132380624_132382765_132382900_132389553
ENSMUSG00000028030.13_132389961_132443303_1	chr3	+	1951	19	ISM	ENSMUSG00000028030.13	ENSMUST00000029664.8	3170	24	0	59292	0	38413	5prime_fragment	FALSE	canonical	1	21	junction_1	19.128948394166	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTATAACTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	132389960	132443303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265
ENSMUSG00000028034.16_151916119_151938145_1	chr3	+	2153	20	NNC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	368.587759275981	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGTAGTGTTTTTTTCC	NA	False	NA	NA	False	AATATA	-44	NA	151916118	151938145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151916119_151938408_1	chr3	+	2476	21	NNC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	490.410182908145	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916118	151938408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151916119_151938408_2	chr3	+	2547	20	NNC	ENSMUSG00000028034.16	novel	2526	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	462.255838074323	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916118	151938408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151937891
ENSMUSG00000028034.16_151916119_151938408_3	chr3	+	2467	21	NNC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	505.246303796475	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916118	151938408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151916119_151938408_4	chr3	+	2416	20	NNC	ENSMUSG00000028034.16	novel	2374	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	368.587759275981	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916118	151938408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151916119_151938408_5	chr3	+	2407	20	NNC	ENSMUSG00000028034.16	novel	2526	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	394.085926482441	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916118	151938408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151916119_151938408_6	chr3	+	2415	20	NNC	ENSMUSG00000028034.16	novel	2374	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	458.142231964203	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916118	151938408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931717_151931855_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151916119_151938664_1	chr3	+	2672	20	NNC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	0	238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	368.587759275981	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTTTAGTATACTTCCA	NA	False	NA	23	True	ATTAAA	-19	NA	151916118	151938664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_151916119_151938664_2	chr3	+	2663	20	NNC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	0	238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	394.085926482441	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTTTAGTATACTTCCA	NA	False	NA	23	True	ATTAAA	-19	NA	151916118	151938664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927051_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028040.8_89241047_89245335_1	chr3	-	1249	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	0	350	0	-350	multi-exon	FALSE	canonical	3	34	junction_1	2.62466929133727	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTGGCTCACACCTGT	1612	False	NA	-12	True	AATAAA	-18	NA	89245335	89241046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
ENSMUSG00000028044.7_89322779_89325585_1	chr3	-	744	3	FSM	ENSMUSG00000028044.7	ENSMUST00000029679.4	849	3	105	0	-59	0	multi-exon	FALSE	canonical	3	2335	junction_2	153.5	9989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTGGTTATAAGACTGT	NA	False	NA	-12	True	ATTAAA	-22	NA	89325585	89322778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89323271_89323580_89323709_89325461
ENSMUSG00000028053.14_88830942_88858344_1	chr3	+	1458	13	NIC	ENSMUSG00000028053.14	novel	11644	28	NA	NA	-26987	-77231	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTACCCGGGATCCGC	NA	False	NA	NA	False	NA	NA	NA	88830941	88858344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88858267
ENSMUSG00000028053.14_88830942_88858488_1	chr3	+	1602	13	NIC	ENSMUSG00000028053.14	novel	11644	28	NA	NA	-26987	-77087	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGGGCTCTTGGTTTGGGG	NA	False	NA	NA	False	NA	NA	NA	88830941	88858488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88858267
ENSMUSG00000028057.15_88624183_88637034_1	chr3	+	1178	6	NIC	ENSMUSG00000028057.15	novel	1204	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	23.9081576036298	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCTTCAACCTGAACT	2255	False	NA	74	True	NA	NA	NA	88624182	88637034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_88624277_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
ENSMUSG00000028062.16_88457126_88460234_1	chr3	-	408	3	NIC	ENSMUSG00000028062.16	novel	668	4	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_2	1306	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	1074	False	NA	-6	True	AATAAA	-14	NA	88460234	88457125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_88457312_88458002_88458093_88460102
ENSMUSG00000028062.16_88457126_88460234_2	chr3	-	528	5	NNC	ENSMUSG00000028062.16	novel	668	4	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1163.36634384875	3751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	1074	False	NA	-6	True	AATAAA	-14	NA	88460234	88457125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_88457193_88457235_88457312_88458002_88458093_88459661_88459825_88460102
ENSMUSG00000028062.16_88457126_88460234_3	chr3	-	565	4	NNC	ENSMUSG00000028062.16	novel	668	4	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	2	145	junction_1	1198.31251720446	7127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	1074	False	NA	-6	True	AATAAA	-14	NA	88460234	88457125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_88457306_88458002_88458093_88459661_88459825_88460102
ENSMUSG00000028064.18_88343269_88348258_1	chr3	-	1920	5	FSM	ENSMUSG00000028064.18	ENSMUST00000156108.8	2108	5	188	0	188	0	multi-exon	TRUE	canonical	3	30	junction_4	4.71036092035419	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTATGGCGTGCTGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	88348258	88343268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004
ENSMUSG00000028066.16_88301450_88317623_1	chr3	-	1089	6	FSM	ENSMUSG00000028066.16	ENSMUST00000192365.2	802	6	-51	-236	-8	0	multi-exon	FALSE	canonical	0	0	junction_2	418.733614604799	3744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCTGTGAGGAGGTTT	NA	False	NA	-6	True	AATAAA	-16	NA	88317623	88301449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_88301878_88303020_88303118_88303211_88303408_88306441_88306543_88307017_88307124_88317462
ENSMUSG00000028066.16_88301450_88317623_2	chr3	-	985	5	NNC	ENSMUSG00000028066.16	novel	1007	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	377.05205210952	3750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCTGTGAGGAGGTTT	NA	False	NA	-6	True	AATAAA	-16	NA	88317623	88301449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_88301867_88303207_88303408_88306441_88306543_88307017_88307124_88317462
ENSMUSG00000028066.16_88301450_88317623_3	chr3	-	1004	5	NNC	ENSMUSG00000028066.16	novel	1007	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	430.732225402279	3800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCTGTGAGGAGGTTT	NA	False	NA	-6	True	AATAAA	-16	NA	88317623	88301449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_88301878_88303211_88303408_88306441_88306543_88307005_88307124_88317462
ENSMUSG00000028070.8_87963827_87965825_1	chr3	-	945	6	NNC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	327.592796013588	2470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965825	87963826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_87964084_87964278_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965633
ENSMUSG00000028070.8_87963827_87965825_2	chr3	-	922	6	NNC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	356.676099563736	2043	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965825	87963826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965642
ENSMUSG00000028070.8_87963827_87965825_4	chr3	-	922	6	NNC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	358.285696058327	946	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965825	87963826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_87964084_87964292_87964441_87965030_87965136_87965227_87965339_87965436_87965546_87965633
ENSMUSG00000028070.8_87963827_87965825_5	chr3	-	924	6	NNC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	356.676099563736	2314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965825	87963826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965539_87965633
ENSMUSG00000028070.8_87963827_87965825_6	chr3	-	934	6	NNC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	356.676099563736	2553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965825	87963826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965558_87965642
ENSMUSG00000028070.8_87963827_87965825_7	chr3	-	817	5	NIC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	382.924519324631	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965825	87963826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_87964084_87964292_87964441_87965227_87965339_87965436_87965546_87965633
ENSMUSG00000028070.8_87963827_87965825_8	chr3	-	926	6	NNC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	358.285696058327	1381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965825	87963826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_87964084_87964292_87964441_87965030_87965136_87965223_87965339_87965436_87965546_87965633
ENSMUSG00000028081.7_86045247_86049902_1	chr3	-	847	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	107	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	3507.30304365049	10572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86049902	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049086_86049814
ENSMUSG00000028081.7_86045247_86049902_10	chr3	-	866	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3839.11278292264	23456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86049902	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_86045418_86045789_86045892_86046342_86046556_86048545_86048734_86049004_86049109_86049814
ENSMUSG00000028081.7_86045247_86049902_11	chr3	-	971	7	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	4215.34150455215	1768	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86049902	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_86045418_86045789_86045900_86046346_86046556_86047752_86047854_86048545_86048734_86049004_86049109_86049814
ENSMUSG00000028081.7_86045247_86049902_12	chr3	-	890	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	3909.82521348461	37774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86049902	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048754_86049004_86049109_86049814
ENSMUSG00000028081.7_86045247_86049902_13	chr3	-	859	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3507.30304365049	32532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86049902	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049825
ENSMUSG00000028081.7_86045247_86049902_14	chr3	-	857	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3914.76974546397	22875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86049902	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_86045418_86045789_86045900_86046346_86046543_86048545_86048734_86049004_86049109_86049814
ENSMUSG00000028081.7_86045247_86049902_2	chr3	-	863	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3914.76974546397	41818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86049902	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_86045418_86045789_86045900_86046346_86046556_86048552_86048734_86049004_86049109_86049814
ENSMUSG00000028081.7_86045247_86049902_3	chr3	-	872	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3839.11278292264	40507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86049902	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_86045418_86045789_86045916_86046360_86046556_86048545_86048734_86049004_86049109_86049814
ENSMUSG00000028081.7_86045247_86049902_4	chr3	-	859	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3839.11278292264	12974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86049902	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_86045418_86045789_86045900_86046357_86046556_86048545_86048734_86049004_86049109_86049814
ENSMUSG00000028081.7_86045247_86049902_5	chr3	-	1317	5	NIC	ENSMUSG00000028081.7	novel	977	6	NA	NA	107	0	intron_retention	FALSE	canonical	3	6820	junction_1	1471.06398569199	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86049902	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_86045418_86045789_86046556_86048545_86048734_86049004_86049109_86049814
ENSMUSG00000028081.7_86045247_86049902_6	chr3	-	860	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3910.13807428843	14778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86049902	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048724_86049004_86049109_86049814
ENSMUSG00000028081.7_86045247_86049902_7	chr3	-	861	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3910.13807428843	84356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86049902	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049013_86049109_86049814
ENSMUSG00000028081.7_86045247_86049902_8	chr3	-	879	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3910.13807428843	108645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86049902	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86048995_86049109_86049814
ENSMUSG00000028081.7_86045247_86049902_9	chr3	-	1689	4	NIC	ENSMUSG00000028081.7	novel	977	6	NA	NA	107	0	intron_retention	FALSE	canonical	3	9125	junction_1	860.871780361177	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86049902	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_86046556_86048545_86048734_86049004_86049109_86049814
ENSMUSG00000028081.7_86045247_86050009_1	chr3	-	736	5	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4286.62679154601	1482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86050009	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_86045370_86046429_86046556_86048545_86048734_86049004_86049109_86049814
ENSMUSG00000028081.7_86045247_86050009_2	chr3	-	747	5	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4286.62679154601	1502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86050009	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_86045381_86046429_86046556_86048545_86048734_86049004_86049109_86049814
ENSMUSG00000028081.7_86045247_86050009_3	chr3	-	696	5	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4286.62679154601	990	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86050009	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_86045344_86046443_86046556_86048545_86048734_86049004_86049109_86049814
ENSMUSG00000028081.7_86045817_86050009_1	chr3	-	779	5	ISM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	0	570	0	-570	5prime_fragment	FALSE	canonical	3	3673	junction_1	2734.43754499897	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGCTGAAGAAACCCAAG	NA	False	NA	NA	False	NA	NA	NA	86050009	86045816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049814
ENSMUSG00000028085.13_85481434_85561471_1	chr3	+	2003	13	FSM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	8	1458	0	6	multi-exon	FALSE	canonical	3	140	junction_6	19.0283049399806	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCGTGGGTGCTTTGTA	NA	False	NA	15	True	AATAAA	-19	NA	85481433	85561471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
ENSMUSG00000028089.6_97468058_97517508_1	chr3	-	2973	23	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	68.3504732250088	422	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTATGTTGCTTTTTT	NA	False	NA	-8	True	AATAGA	-13	NA	97517508	97468057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ENSMUSG00000028093.16_97066093_97083834_1	chr3	+	1690	10	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_6	376.195280258656	3814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATCATGTTGAGATCAA	NA	False	NA	17	True	AATAAA	-17	NA	97066092	97083834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078965_97079059_97081118_97081215_97082943_97083110_97083646
ENSMUSG00000028093.16_97066093_97083834_2	chr3	+	1693	10	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	382.160750870851	3825	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATCATGTTGAGATCAA	NA	False	NA	17	True	AATAAA	-17	NA	97066092	97083834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_97066682_97073158_97073288_97073389_97073516_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ENSMUSG00000028098.14_96634988_96698267_1	chr3	+	2000	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	8	201	0	-201	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAAAGCTCATTTTTC	4803	False	NA	21	True	ATTAAA	-21	NA	96634987	96698267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ENSMUSG00000028099.9_96618839_96634791_1	chr3	-	2301	14	NIC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	175	junction_5	22.7614331762454	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTATCTGTTCTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	96634791	96618838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631369_96633149_96633316_96634664
ENSMUSG00000028099.9_96618839_96634791_2	chr3	-	2204	15	FSM	ENSMUSG00000028099.9	ENSMUST00000029741.9	2390	15	153	33	0	0	multi-exon	FALSE	canonical	3	175	junction_5	23.0394515240839	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTATCTGTTCTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	96634791	96618838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
ENSMUSG00000028099.9_96618982_96634791_1	chr3	-	2061	15	FSM	ENSMUSG00000028099.9	ENSMUST00000029741.9	2390	15	153	176	0	-143	multi-exon	FALSE	canonical	3	175	junction_5	23.0394515240839	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGCTCGGCTGCAGAT	NA	False	NA	NA	False	NA	NA	NA	96634791	96618981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
ENSMUSG00000028100.12_96613384_96615855_1	chr3	-	1139	8	FSM	ENSMUSG00000028100.12	ENSMUST00000029742.9	1039	8	0	-100	0	0	multi-exon	FALSE	canonical	3	11	junction_6	22.7075461699679	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTTTTTTAAGTGA	NA	False	NA	-1	True	AATAAA	-14	NA	96615855	96613383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615125_96615203_96615307_96615492_96615643
ENSMUSG00000028101.19_96603758_96612794_1	chr3	+	2778	13	ISM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	58	484	0	4	intron_retention	FALSE	canonical	3	88	junction_1	28.0132657067247	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTCTTTGACATCCAT	2646	False	NA	NA	False	NA	NA	NA	96603757	96612794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
ENSMUSG00000028101.19_96604433_96612794_1	chr3	+	2305	14	FSM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	34	592	0	4	multi-exon	FALSE	canonical	3	105	junction_1	24.6852374253431	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTCTTTGACATCCAT	3321	False	NA	NA	False	NA	NA	NA	96604432	96612794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ENSMUSG00000028101.19_96604433_96613278_1	chr3	+	2789	14	FSM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	34	108	0	0	multi-exon	FALSE	canonical	3	105	junction_1	24.6852374253431	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	3321	False	NA	5	True	AATAAA	-15	NA	96604432	96613278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ENSMUSG00000028102.16_96542790_96552045_1	chr3	+	1500	4	FSM	ENSMUSG00000028102.16	ENSMUST00000144962.8	2235	4	98	637	-26	3	multi-exon	FALSE	canonical	3	9	junction_1	127.753234357839	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTATTCAATTCAAGA	NA	False	NA	12	True	ATTAAA	-19	NA	96542789	96552045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96542817_96543989_96544106_96544446_96544649_96550890
ENSMUSG00000028102.16_96542988_96552045_1	chr3	+	1886	3	NIC	ENSMUSG00000028102.16	novel	1122	5	NA	NA	0	3	intron_retention	FALSE	canonical	3	279	junction_2	10.5	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTATTCAATTCAAGA	NA	False	NA	12	True	ATTAAA	-19	NA	96542987	96552045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_96543060_96543989_96544649_96550890
ENSMUSG00000028107.15_95647288_95662183_1	chr3	-	2501	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	178	junction_5	104.120554376886	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662183	95647287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ENSMUSG00000028109.15_95466988_95493462_1	chr3	+	1426	15	NNC	ENSMUSG00000028109.15	novel	1437	15	NA	NA	0	353	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_14	88.6413318620931	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCCAATTTTTATTTTA	NA	False	NA	27	True	ATTAAA	-19	NA	95466987	95493462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95493210
ENSMUSG00000028109.15_95466988_95494907_1	chr3	+	1369	14	NIC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	92.2606290279828	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95466987	95494907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95466988_95494907_11	chr3	+	1398	15	NNC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.7207385357915	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95466987	95494907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95467044_95468530_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95466988_95494907_12	chr3	+	1388	13	NNC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	95.7027733837078	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95466987	95494907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95482799_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95466988_95494907_13	chr3	+	1640	16	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_2	105.894412820822	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95466987	95494907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95467035_95467121_95467381_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95466988_95494907_3	chr3	+	1406	14	NNC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	92.4968574550144	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95466987	95494907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95478201_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95466988_95494907_4	chr3	+	1369	13	NNC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	96.0698169157318	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95466987	95494907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95478201_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95466988_95494907_9	chr3	+	1506	16	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	105.267194425529	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95466987	95494907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95467035_95467121_95467247_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95466988_95495172_4	chr3	+	1905	16	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	0	190	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	105.894412820822	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTGTGTTATTAACAAC	NA	False	NA	9	True	ATTAAA	-20	NA	95466987	95495172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95467035_95467121_95467381_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95466988_95495172_5	chr3	+	1634	14	NIC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	0	190	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	92.2606290279828	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTGTGTTATTAACAAC	NA	False	NA	9	True	ATTAAA	-20	NA	95466987	95495172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95466988_95495172_7	chr3	+	1710	16	FSM	ENSMUSG00000028109.15	ENSMUST00000107154.4	1444	16	-1	-265	0	190	multi-exon	FALSE	canonical	3	12	junction_15	107.711260114974	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTGTGTTATTAACAAC	NA	False	NA	9	True	ATTAAA	-20	NA	95466987	95495172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95492845_95492901_95494691
ENSMUSG00000028109.15_95466988_95495172_8	chr3	+	1663	15	NNC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	0	190	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.7207385357915	1757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTGTGTTATTAACAAC	NA	False	NA	9	True	ATTAAA	-20	NA	95466987	95495172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95467044_95468530_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_95466988_95495172_9	chr3	+	1771	16	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	0	190	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	105.267194425529	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTGTGTTATTAACAAC	NA	False	NA	9	True	ATTAAA	-20	NA	95466987	95495172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95467035_95467121_95467247_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028115.17_95148904_95158467_1	chr3	-	1451	10	FSM	ENSMUSG00000028115.17	ENSMUST00000107195.9	1810	10	37	322	-8	232	multi-exon	TRUE	canonical	1	1	junction_9	2.53859103528797	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAAGGCTCTGAGTTTTA	NA	False	NA	NA	False	AAAAAG	-21	NA	95158467	95148903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95149173_95150042_95150142_95150308_95150396_95151452_95151585_95152295_95152399_95152960_95153144_95155886_95156112_95157116_95157182_95157477_95157574_95158275
ENSMUSG00000028124.16_122056351_122060592_1	chr3	+	932	3	ISM	ENSMUSG00000028124.16	ENSMUST00000176761.3	495	4	923	-688	923	0	3prime_fragment	FALSE	canonical	3	448	junction_2	47	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATGTGTGTGTTCTTGC	NA	False	NA	16	True	AATAAA	-28	NA	122056350	122060592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_122056452_122058442_122058558_122059876
ENSMUSG00000028127.11_121552556_121608846_1	chr3	-	3384	23	FSM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	105	0	0	0	multi-exon	TRUE	canonical	3	145	junction_14	20.5277981251709	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGTGCCTGACCTTTT	7236	False	NA	-1	True	ATTAAA	-22	NA	121608846	121552555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
ENSMUSG00000028138.9_138148854_138161016_1	chr3	+	1360	9	FSM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	0	244	0	12	multi-exon	FALSE	canonical	3	1845	junction_1	151.305103598656	9231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACATAAACAATTGCTGC	4924	False	NA	-44	True	NA	NA	NA	138148853	138161016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ENSMUSG00000028138.9_138148872_138161077_1	chr3	+	1396	9	NNC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	0	73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	719.202292474099	9766	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGAGTTGAACAT	4942	False	NA	17	True	AATAAA	-14	NA	138148871	138161077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159509_138159639_138160428_138160568_138160845
ENSMUSG00000028145.10_94217396_94239466_1	chr3	+	1400	6	FSM	ENSMUSG00000028145.10	ENSMUST00000049822.10	1781	6	0	381	0	-381	multi-exon	FALSE	canonical	3	18	junction_4	4.47213595499958	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGCAATTGTATCTTAA	NA	False	NA	NA	False	ATTAAA	-20	NA	94217395	94239466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_94217596_94224696_94224884_94230888_94231049_94231583_94231692_94237068_94237194_94238846
ENSMUSG00000028156.13_138233046_138261975_1	chr3	+	1376	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	860	-815	0	0	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTGATCTATGTCTGTG	NA	False	NA	73	True	NA	NA	NA	138233045	138261975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ENSMUSG00000028156.13_138233046_138262218_1	chr3	+	1619	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	860	-1058	0	243	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	4063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACTAGATTTGTCCTTT	NA	False	NA	24	True	AATAAA	-25	NA	138233045	138262218	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ENSMUSG00000028156.13_138233046_138262670_1	chr3	+	2071	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	860	-1510	0	695	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	4731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATTGGTCAATTGTTG	NA	False	NA	12	True	AATAAA	-27	NA	138233045	138262670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ENSMUSG00000028158.15_137849230_137862880_1	chr3	-	1302	8	NIC	ENSMUSG00000028158.15	novel	2012	2	NA	NA	-12151	-1206	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTACGGCACTTACGGCT	1444	False	NA	NA	False	NA	NA	NA	137862880	137849229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_137849358_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ENSMUSG00000028158.15_137849230_137864038_1	chr3	-	2460	8	NIC	ENSMUSG00000028158.15	novel	2012	2	NA	NA	-13309	-1206	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	498	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTACGGCACTTACGGCT	286	False	NA	NA	False	NA	NA	NA	137864038	137849229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_137849358_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ENSMUSG00000028159.15_137638444_137687291_1	chr3	-	1392	9	FSM	ENSMUSG00000028159.15	ENSMUST00000029806.13	3083	9	15	1676	0	0	multi-exon	FALSE	canonical	3	16	junction_1	5.49431524395898	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGTTGCTTTTGTTTTGC	NA	False	NA	0	True	AATAAA	-20	NA	137687291	137638443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_137638951_137641342_137641431_137643497_137643584_137644897_137644961_137646621_137646670_137655407_137655539_137667202_137667337_137671641_137671765_137687079
ENSMUSG00000028163.18_135290416_135300210_1	chr3	-	1748	7	ISM	ENSMUSG00000028163.18	ENSMUST00000129428.8	2520	13	14034	-227	-8	0	3prime_fragment	FALSE	canonical	3	48	junction_1	5.39804491356722	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTGATCTCTGCAAA	NA	False	NA	0	True	AATAAA	-25	NA	135300210	135290415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969
ENSMUSG00000028165.10_135113616_135129165_1	chr3	-	1397	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	521	1443	0	-1443	multi-exon	FALSE	canonical	3	215	junction_1	1	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAACTCTTGTTGTATTTT	NA	False	NA	-1	True	TTTAAA	-4	NA	135129165	135113615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_135114652_135116771_135116987_135129019
ENSMUSG00000028165.10_135113997_135129165_1	chr3	-	1016	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	521	1824	0	1776	multi-exon	FALSE	canonical	3	215	junction_1	1	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAATTAGAAACAATTATT	NA	False	NA	NA	False	AGTAAA	-16	NA	135129165	135113996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_135114652_135116771_135116987_135129019
ENSMUSG00000028165.10_135114222_135129165_1	chr3	-	791	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	521	2049	0	1551	multi-exon	FALSE	canonical	3	215	junction_1	1	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGTTCTGTTAAATGT	NA	False	NA	-14	True	AATACA	-18	NA	135129165	135114221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_135114652_135116771_135116987_135129019
ENSMUSG00000028167.16_134987044_135010187_1	chr3	+	1110	10	FSM	ENSMUSG00000028167.16	ENSMUST00000120397.8	1172	10	62	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	10.4880884817015	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTAGTTTTTTTTCTTAA	NA	False	NA	21	True	AATAAA	-31	NA	134987043	135010187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_134987130_134991275_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
ENSMUSG00000028173.11_159545309_159640710_1	chr3	+	2610	12	FSM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	0	949	0	171	multi-exon	FALSE	canonical	3	17	junction_6	6.38697020736374	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTTCTTGCTTAAAATG	NA	False	NA	16	True	ATTAAA	-27	NA	159545308	159640710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ENSMUSG00000028173.11_159545309_159640811_1	chr3	+	2711	12	FSM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	0	848	0	272	multi-exon	FALSE	canonical	3	17	junction_6	6.38697020736374	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTCCTGTCCCAACAGT	NA	False	NA	117	True	AATAAA	-18	NA	159545308	159640811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ENSMUSG00000028179.13_157600060_157630700_1	chr3	-	1626	12	FSM	ENSMUSG00000028179.13	ENSMUST00000118539.2	1815	12	14	175	-12	0	multi-exon	FALSE	canonical	3	948	junction_5	60.9754048777046	2554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTGGTTTTTTTTTGA	NA	False	NA	-18	True	ATTAAA	-19	NA	157630700	157600059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
ENSMUSG00000028180.19_157240025_157253978_1	chr3	+	1879	11	NNC	ENSMUSG00000028180.19	novel	2737	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	254.012676849011	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTGTTGTTTATTAGAA	NA	False	NA	16	True	AATAAA	-17	NA	157240024	157253978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311_157252541_157253288
ENSMUSG00000028180.19_157240025_157253978_2	chr3	+	2627	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	228	69	0	5	multi-exon	FALSE	canonical	3	697	junction_8	81.8057017542553	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTGTTGTTTATTAGAA	NA	False	NA	16	True	AATAAA	-17	NA	157240024	157253978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ENSMUSG00000028180.19_157240025_157253978_3	chr3	+	2621	10	NNC	ENSMUSG00000028180.19	novel	2737	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	261.291427101126	1101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTGTTGTTTATTAGAA	NA	False	NA	16	True	AATAAA	-17	NA	157240024	157253978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243229_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ENSMUSG00000028180.19_157240025_157253978_4	chr3	+	1334	4	NNC	ENSMUSG00000028180.19	novel	2737	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	380.445353062259	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTGTTGTTTATTAGAA	NA	False	NA	16	True	AATAAA	-17	NA	157240024	157253978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_157240112_157241970_157242024_157242114_157242157_157252826
ENSMUSG00000028187.11_146212178_146226806_1	chr3	-	1300	9	NIC	ENSMUSG00000028187.11	novel	1661	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_8	185.127616456865	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACAAATGACCAAGTACT	NA	False	NA	-82	True	TATAAA	-10	NA	146226806	146212177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226439
ENSMUSG00000028189.13_146156233_146170022_1	chr3	+	1302	7	FSM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	8	1582	0	-1504	multi-exon	FALSE	canonical	3	19	junction_1	4.91313432432789	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATACATATCTTAGATAT	5962	False	NA	NA	False	AATAAA	-27	NA	146156232	146170022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
ENSMUSG00000028189.13_146156233_146170335_1	chr3	+	1615	7	FSM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	8	1269	0	-1191	multi-exon	FALSE	canonical	3	19	junction_1	4.91313432432789	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGTGTAACTTGAAATGG	5962	False	NA	NA	False	AATAAA	-14	NA	146156232	146170335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
ENSMUSG00000028189.13_146156233_146170828_1	chr3	+	2108	7	FSM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	8	776	0	-698	multi-exon	FALSE	canonical	3	19	junction_1	4.91313432432789	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTTCTTGTTTCCTTTCT	5962	False	NA	NA	False	AATAAA	-14	NA	146156232	146170828	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
ENSMUSG00000028199.19_154285482_154302732_1	chr3	+	1076	6	NIC	ENSMUSG00000028199.19	novel	2505	9	NA	NA	-16866	-14343	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCCGCCACGGTGGCCGG	NA	False	NA	NA	False	NA	NA	NA	154285481	154302732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_154285929_154293113_154293248_154296720_154296793_154299353_154299453_154300090_154300172_154302489
ENSMUSG00000028199.19_154302859_154328819_1	chr3	+	2239	9	NIC	ENSMUSG00000028199.19	novel	2507	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	57.5769865050265	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTCTGTCTCGTGTG	NA	False	NA	18	True	AGTAAA	-18	NA	154302858	154328819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_154303165_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ENSMUSG00000028199.19_154302859_154328819_2	chr3	+	1996	9	FSM	ENSMUSG00000028199.19	ENSMUST00000029850.15	2507	9	511	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	25.4447931805311	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTCTGTCTCGTGTG	NA	False	NA	18	True	AGTAAA	-18	NA	154302858	154328819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ENSMUSG00000028212.17_11191736_11203632_1	chr4	+	1852	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	6	1050	0	-1043	multi-exon	FALSE	canonical	3	208	junction_1	27.8285779741998	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGTTTTGTAATAAAGTG	315	False	NA	NA	False	AATAAA	-20	NA	11191735	11203632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ENSMUSG00000028212.17_11191736_11204458_1	chr4	+	2678	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	6	224	0	-217	multi-exon	FALSE	canonical	3	208	junction_1	27.8285779741998	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACTGCTTAAAAGTAAAG	315	False	NA	7	True	AATAAA	-17	NA	11191735	11204458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ENSMUSG00000028212.17_11204384_11225729_1	chr4	+	1245	13	NIC	ENSMUSG00000028212.17	novel	3006	12	NA	NA	11787	20950	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCGGAGTTTTGGTGAGAA	1972	False	NA	NA	False	NA	NA	NA	11204383	11225729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601
ENSMUSG00000028218.20_12100496_12171790_1	chr4	-	1095	8	NNC	ENSMUSG00000028218.20	novel	648	7	NA	NA	-56	52913	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	130.899556445204	643	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACAGTCTTTCTTTCAT	-2	True	NA	NA	False	ATTAAA	-41	NA	12171790	12100495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_12100753_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
ENSMUSG00000028218.20_12100496_12171871_1	chr4	-	1176	9	NNC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	0	52913	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_5	137.135368796675	1319	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACAGTCTTTCTTTCAT	126	False	NA	NA	False	ATTAAA	-41	NA	12171871	12100495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_12100591_12153816_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
ENSMUSG00000028218.20_12153724_12171790_1	chr4	-	979	7	NIC	ENSMUSG00000028218.20	novel	1292	8	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	182.908598910919	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTACATAGTCTTTCTTTC	-2	True	NA	-42	True	ATTAAA	-39	NA	12171790	12153723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_12153979_12155648_12155769_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
ENSMUSG00000028223.9_15918927_15945380_1	chr4	-	1145	10	FSM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	127	1687	-105	-1687	multi-exon	FALSE	canonical	3	139	junction_6	12.6207745648706	579	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTAGTTCTGAGGATC	-7	True	NA	-28	True	AATAAA	-16	NA	15945380	15918926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892_15933096_15945282
ENSMUSG00000028224.15_15957967_15992589_1	chr4	+	2409	16	NNC	ENSMUSG00000028224.15	novel	2533	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	53.2213825032341	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGTGTGGTAACGT	-3	True	NA	9	True	AATAAA	-15	NA	15957966	15992589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_15958111_15962310_15962445_15963771_15963921_15964328_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
ENSMUSG00000028228.6_19523202_19570083_1	chr4	-	1675	16	FSM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	25	3948	0	-3948	multi-exon	FALSE	canonical	3	122	junction_5	15.541199724889	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAGCTGTGAAGTAGAG	12	True	NA	NA	False	NA	NA	NA	19570083	19523201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
ENSMUSG00000028232.14_3549277_3574809_1	chr4	-	2402	8	NNC	ENSMUSG00000028232.14	novel	2773	9	NA	NA	0	-236	intron_retention	FALSE	canonical	0	0	junction_6	25.7840323946937	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCTAGTAAAAATGTTAT	-11	True	NA	NA	False	AATAAA	-17	NA	3574809	3549276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570328_3570373_3574703
ENSMUSG00000028232.14_3549277_3574809_2	chr4	-	2410	8	FSM	ENSMUSG00000028232.14	ENSMUST00000029891.12	2690	8	44	236	0	-236	multi-exon	FALSE	canonical	3	50	junction_4	11.6233403467474	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCTAGTAAAAATGTTAT	-11	True	NA	NA	False	AATAAA	-17	NA	3574809	3549276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570320_3570373_3574703
ENSMUSG00000028233.7_3574875_3595875_1	chr4	+	2194	8	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	0	20744	0	-2731	5prime_fragment	FALSE	canonical	3	152	junction_6	22.2049819745434	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAATCAATCAATCAATCAA	-18	True	NA	NA	False	NA	NA	NA	3574874	3595875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356
ENSMUSG00000028233.7_3574875_3615493_1	chr4	+	3201	13	FSM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	0	1126	0	210	multi-exon	FALSE	canonical	2	97	junction_11	33.5186515241887	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTGTAATCCCTATTGAA	-18	True	NA	NA	False	TATAAA	-24	NA	3574874	3615493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ENSMUSG00000028233.7_3574875_3616418_1	chr4	+	4126	13	FSM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	0	201	0	-201	multi-exon	FALSE	canonical	2	97	junction_11	33.5186515241887	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGAGAGGCACCCAAGCT	-18	True	NA	NA	False	NA	NA	NA	3574874	3616418	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ENSMUSG00000028234.7_3834473_3835665_1	chr4	-	567	4	FSM	ENSMUSG00000028234.7	ENSMUST00000138502.2	3706	4	0	3139	0	0	multi-exon	FALSE	canonical	3	6653	junction_2	782.301021914767	186551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGCTGGCTTTTGTT	NA	False	NA	-40	True	AATAAA	-15	NA	3835665	3834472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483
ENSMUSG00000028243.6_6191098_6216563_1	chr4	+	1517	8	FSM	ENSMUSG00000028243.6	ENSMUST00000029907.6	6642	8	0	5125	0	-5125	multi-exon	TRUE	canonical	3	103	junction_2	16.4614577676685	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTTGTCCTTGTGTTT	-10	True	NA	NA	False	TTTAAA	-20	NA	6191097	6216563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_6191214_6196410_6196515_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ENSMUSG00000028243.6_6191098_6217449_1	chr4	+	2403	8	FSM	ENSMUSG00000028243.6	ENSMUST00000029907.6	6642	8	0	4239	0	-4239	multi-exon	FALSE	canonical	3	103	junction_2	16.4614577676685	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGATTATCTACATTAAG	-10	True	NA	NA	False	NA	NA	NA	6191097	6217449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_6191214_6196410_6196515_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ENSMUSG00000028248.16_21848048_21859202_2	chr4	+	499	4	ISM	ENSMUSG00000028248.16	ENSMUST00000150368.8	822	6	-33	2921	0	0	5prime_fragment	FALSE	canonical	3	402	junction_3	52.7825728815866	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGCCCCTGACAACAG	-11	True	NA	NA	False	NA	NA	NA	21848047	21859202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083
ENSMUSG00000028248.16_21848048_21875256_1	chr4	+	2861	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	465	1219	0	0	multi-exon	FALSE	canonical	3	306	junction_11	60.0897400518935	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-11	True	NA	13	True	AATAAA	-25	NA	21848047	21875256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ENSMUSG00000028248.16_21848048_21875256_2	chr4	+	3101	11	ISM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	465	1219	0	0	intron_retention	FALSE	canonical	3	310	junction_8	50.2622124463299	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-11	True	NA	13	True	AATAAA	-25	NA	21848047	21875256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ENSMUSG00000028249.16_6365708_6395432_1	chr4	+	1835	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	58	852	0	-223	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAGTGGGTAATATCTAA	-1	True	NA	8	True	AATAAA	-20	NA	6365707	6395432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ENSMUSG00000028251.6_21758185_21767212_1	chr4	-	785	4	FSM	ENSMUSG00000028251.6	ENSMUST00000029915.6	1588	4	0	803	0	-803	multi-exon	FALSE	canonical	3	232	junction_1	27.288581250528	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTATTCTTTTCTCAT	-17	True	NA	NA	False	NA	NA	NA	21767212	21758184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_21758476_21759369_21759530_21759622_21759794_21767049
ENSMUSG00000028252.21_21727758_21750105_1	chr4	+	2986	13	FSM	ENSMUSG00000028252.21	ENSMUST00000065928.11	3484	13	57	441	0	-441	multi-exon	FALSE	canonical	3	29	junction_12	125.983023547707	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACTGTGAGCATCTTT	-2	True	NA	NA	False	NA	NA	NA	21727757	21750105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482_21747577_21748136
ENSMUSG00000028256.17_144824660_144859650_1	chr3	+	2235	16	NNC	ENSMUSG00000028256.17	novel	913	7	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	26.9686237443935	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAACAGTATAAGTT	NA	False	NA	NA	False	AATAAA	-17	NA	144824659	144859650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_144824690_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ENSMUSG00000028261.14_24898131_24902217_1	chr4	+	1070	2	FSM	ENSMUSG00000028261.14	ENSMUST00000146721.2	2358	2	0	1288	0	-1268	multi-exon	FALSE	canonical	3	446	junction_1	0	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTGTTCTTTGTAGT	11	True	NA	19	True	ATTAAA	-19	NA	24898130	24902217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_24898677_24901693
ENSMUSG00000028261.14_24898131_24902217_2	chr4	+	800	3	FSM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	48	2784	0	-1268	multi-exon	FALSE	canonical	3	446	junction_2	23.5	1358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTGTTCTTTGTAGT	11	True	NA	19	True	ATTAAA	-19	NA	24898130	24902217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_24898303_24898572_24898677_24901693
ENSMUSG00000028261.14_24898131_24903505_1	chr4	+	2088	3	FSM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	48	1496	0	0	multi-exon	FALSE	canonical	3	446	junction_2	23.5	1841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGGTTTTTTCTTTC	11	True	NA	14	True	AATAAA	-27	NA	24898130	24903505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_24898303_24898572_24898677_24901693
ENSMUSG00000028271.10_142470984_142489367_1	chr3	+	1277	7	FSM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	178	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	21.5129160170246	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTTATAGTATTAAT	NA	False	NA	8	True	AATAAA	-15	NA	142470983	142489367	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_142471050_142477146_142477254_142483951_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
ENSMUSG00000028274.18_33310328_33500639_1	chr4	+	2165	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	17	1975	0	-275	multi-exon	FALSE	canonical	3	214	junction_12	34.6965256025569	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATCAGATTGAAGTTAAT	-19	True	NA	NA	False	NA	NA	NA	33310327	33500639	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ENSMUSG00000028274.18_33310328_33500914_2	chr4	+	2440	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	17	1700	0	0	multi-exon	FALSE	canonical	3	214	junction_12	34.6965256025569	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTCTTCTGGTTTTG	-19	True	NA	13	True	ATTAAA	-26	NA	33310327	33500914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ENSMUSG00000028277.14_33031528_33050029_1	chr4	+	1084	8	FSM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	112	2334	0	-2334	multi-exon	FALSE	canonical	3	77	junction_6	15.4813910675932	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTGTTTACAAAAAGATT	-14	True	NA	25	True	ATTAAA	-25	NA	33031527	33050029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33045079_33045200_33049681
ENSMUSG00000028282.13_32646568_32653265_1	chr4	+	870	4	ISM	ENSMUSG00000028282.13	ENSMUST00000029950.10	6799	11	31090	0	22484	0	3prime_fragment	FALSE	canonical	3	269	junction_2	25.694789787469	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTAGTATGCTTCTT	NA	False	NA	7	True	AATAAA	-20	NA	32646567	32653265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_32646661_32648026_32648127_32649172_32649258_32652673
ENSMUSG00000028291.8_34551201_34566908_1	chr4	+	1133	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	264	0	250	0	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGTTTCCGAATTG	262	False	NA	13	True	AATAAA	-14	NA	34551200	34566908	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ENSMUSG00000028292.15_34614969_34660164_1	chr4	+	1848	20	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_19	156.413189573566	1240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGTAGTAGTGTGT	0	True	NA	9	True	AATAGA	-24	NA	34614968	34660164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659988
ENSMUSG00000028293.15_34663257_34687255_1	chr4	-	1856	8	FSM	ENSMUSG00000028293.15	ENSMUST00000029970.14	2039	8	183	0	0	0	multi-exon	FALSE	canonical	3	108	junction_4	17.6831523646385	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGCAGTTACTTTGT	205	False	NA	-13	True	AATAAA	-14	NA	34687255	34663256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34687243
ENSMUSG00000028293.15_34663893_34687396_1	chr4	-	1361	8	FSM	ENSMUSG00000028293.15	ENSMUST00000029970.14	2039	8	42	636	0	0	multi-exon	FALSE	canonical	3	108	junction_4	17.6831523646385	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAGAGAGAGAGAGAGAGA	21	True	NA	NA	False	AATGAA	-14	NA	34687396	34663892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34687243
ENSMUSG00000028295.15_34768786_34778342_1	chr4	-	583	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	81	122	-5	-111	multi-exon	FALSE	canonical	3	160	junction_2	5.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATGGAGTTTCTAACG	9	True	NA	NA	False	AATAAA	-20	NA	34778342	34768785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_34769148_34771257_34771415_34778278
ENSMUSG00000028318.15_45018662_45032365_1	chr4	+	1580	12	FSM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	79	1327	0	0	multi-exon	FALSE	canonical	3	141	junction_4	16.5753974809925	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCCTTTCATGTTGC	14	True	NA	19	True	ATTAAA	-24	NA	45018661	45032365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ENSMUSG00000028322.12_45316613_45320604_1	chr4	-	797	4	NNC	ENSMUSG00000028322.12	novel	1077	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_3	209.085309542939	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTGTAGTTCTACAGT	3	True	NA	-1	True	AATAAA	-17	NA	45320604	45316612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_45317029_45317677_45317830_45319549_45319700_45320525
ENSMUSG00000028322.12_45316613_45320604_2	chr4	-	902	3	NIC	ENSMUSG00000028322.12	novel	1077	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	240.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTGTAGTTCTACAGT	3	True	NA	-1	True	AATAAA	-17	NA	45320604	45316612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_45317029_45317677_45317830_45320270
ENSMUSG00000028328.14_46114746_46138455_1	chr4	+	3703	10	NIC	ENSMUSG00000028328.14	novel	3158	10	NA	NA	14503	22423	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCGCGCGTGCGCAGAGA	54	False	NA	NA	False	NA	NA	NA	46114745	46138455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135592_46138379
ENSMUSG00000028329.14_46138747_46172057_1	chr4	-	2530	23	NIC	ENSMUSG00000028329.14	novel	1241	6	NA	NA	13592	16600	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGGCGCGCAGGCGCACT	NA	False	NA	NA	False	NA	NA	NA	46172057	46138746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ENSMUSG00000028329.14_46138747_46172403_1	chr4	-	2876	23	NIC	ENSMUSG00000028329.14	novel	1241	6	NA	NA	13246	16600	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	815	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGGCGCGCAGGCGCACT	NA	False	NA	NA	False	NA	NA	NA	46172403	46138746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ENSMUSG00000028334.11_46489319_46502674_1	chr4	+	1150	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	71	958	0	-958	multi-exon	FALSE	canonical	3	811	junction_3	76.1377698648969	2123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTGCTGTCCAGT	3	True	NA	12	True	AATAAA	-25	NA	46489318	46502674	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
ENSMUSG00000028334.11_46489319_46502674_2	chr4	+	1009	6	NNC	ENSMUSG00000028334.11	novel	2179	6	NA	NA	0	-958	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	361.736146935857	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTGCTGTCCAGT	3	True	NA	12	True	AATAAA	-25	NA	46489318	46502674	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500914_46502509
ENSMUSG00000028334.11_46489319_46502674_3	chr4	+	1184	6	NNC	ENSMUSG00000028334.11	novel	2179	6	NA	NA	0	-958	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	357.435085015447	2119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTGCTGTCCAGT	3	True	NA	12	True	AATAAA	-25	NA	46489318	46502674	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502400
ENSMUSG00000028343.11_48194490_48279573_1	chr4	-	1467	12	NNC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	204.322990134543	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTTTAATTTTTTTCC	5	True	NA	-28	True	AATAAA	-14	NA	48279573	48194489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218192_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ENSMUSG00000028345.16_48430858_48473422_1	chr4	-	2592	15	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_12	196.22390636355	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	8	True	NA	-3	True	ATTAAA	-18	NA	48473422	48430857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470073_48473265
ENSMUSG00000028367.6_57943757_57956291_1	chr4	-	547	5	FSM	ENSMUSG00000028367.6	ENSMUST00000030051.6	1051	5	120	384	120	-384	multi-exon	TRUE	canonical	3	4612	junction_4	90.890043459116	44588	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATGTGTTTTAATA	-1	True	NA	-3	True	AATAAA	-25	NA	57956291	57943756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796_57951902_57956186
ENSMUSG00000028378.7_58966517_58987119_1	chr4	-	1212	10	NNC	ENSMUSG00000028378.7	novel	2296	10	NA	NA	0	-1078	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	132.10499004603	2692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTGATAGAGAATGAAAT	5	True	NA	-5	True	AATAAA	-24	NA	58987119	58966516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_58966764_58968758_58968872_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
ENSMUSG00000028378.7_58966517_58987119_2	chr4	-	1218	10	FSM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	0	1078	0	-1078	multi-exon	FALSE	canonical	3	293	junction_9	57.656068390259	2692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTGATAGAGAATGAAAT	5	True	NA	-5	True	AATAAA	-24	NA	58987119	58966516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
ENSMUSG00000028382.16_59475259_59549288_1	chr4	-	3388	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	76	3391	-4	0	multi-exon	FALSE	canonical	3	119	junction_2	23.0463900573291	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTTGTTAATTATTTC	1	True	NA	-18	True	NA	NA	NA	59549288	59475258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
ENSMUSG00000028389.13_62107777_62126709_1	chr4	-	3511	4	FSM	ENSMUSG00000028389.13	ENSMUST00000221329.2	1776	4	-111	-1624	-26	0	multi-exon	FALSE	canonical	3	15	junction_3	10.3708994574027	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGTGGTATTTTATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	62126709	62107776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62110927_62122755_62122888_62123260_62123346_62126565
ENSMUSG00000028389.13_62109226_62126783_1	chr4	-	2145	4	FSM	ENSMUSG00000028389.13	ENSMUST00000068822.4	3494	4	-100	1449	-100	0	multi-exon	FALSE	canonical	3	7	junction_3	14.142135623731	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAAATACTGTATTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	62126783	62109225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62110927_62122755_62122888_62123260_62123346_62126556
ENSMUSG00000028391.17_62370869_62389124_1	chr4	-	2442	11	FSM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	0	-1002	0	0	multi-exon	FALSE	canonical	3	150	junction_2	19.4548194543152	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	62389124	62370868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ENSMUSG00000028391.17_62371971_62389124_1	chr4	-	1340	11	FSM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	0	100	0	-100	multi-exon	FALSE	canonical	3	150	junction_2	19.4548194543152	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGGCTTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	62389124	62371970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ENSMUSG00000028391.17_62371971_62389124_2	chr4	-	1447	11	FSM	ENSMUSG00000028391.17	ENSMUST00000120095.8	2549	11	0	1102	0	-100	multi-exon	FALSE	canonical	3	20	junction_10	54.6457683631587	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGGCTTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	62389124	62371970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62388948
ENSMUSG00000028393.11_62427406_62438169_1	chr4	-	1211	12	NNC	ENSMUSG00000028393.11	novel	1206	12	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	192.524764962762	1870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	False	NA	-1	True	AGTAAA	-18	NA	62438169	62427405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_62427548_62428341_62428463_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
ENSMUSG00000028394.10_62442035_62443281_1	chr4	-	632	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	24	1149	-6	537	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCTTCCCAGGCTCAGA	NA	False	NA	-7	True	AATAAA	-23	NA	62443281	62442034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
ENSMUSG00000028397.14_74170288_74324098_1	chr4	+	4082	22	FSM	ENSMUSG00000028397.14	ENSMUST00000030102.12	4196	22	115	-1	115	1	multi-exon	FALSE	canonical	0	0	junction_5	55.9303502727513	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170287	74324098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ENSMUSG00000028398.9_75195719_75196542_1	chr4	-	613	2	FSM	ENSMUSG00000028398.9	ENSMUST00000030103.9	741	2	0	128	0	-128	multi-exon	FALSE	canonical	3	402	junction_1	0	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTTCTCTGTCTTGTCC	NA	False	NA	-4	True	AATAAA	-16	NA	75196542	75195718	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_75196007_75196217
ENSMUSG00000028407.5_40270665_40279409_1	chr4	+	573	4	NIC	ENSMUSG00000028407.5	novel	1044	2	NA	NA	881	8469	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	11226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGCGGCGCGGAGTGAT	729	False	NA	NA	False	NA	NA	NA	40270664	40279409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_40270848_40272809_40272855_40277652_40277746_40279157
ENSMUSG00000028407.5_40270665_40279409_3	chr4	+	560	4	NNC	ENSMUSG00000028407.5	novel	1044	2	NA	NA	881	8469	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	10732	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGCGGCGCGGAGTGAT	729	False	NA	NA	False	NA	NA	NA	40270664	40279409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_40270848_40272809_40272855_40277652_40277746_40279170
ENSMUSG00000028409.12_40737117_40757883_1	chr4	-	1797	12	NNC	ENSMUSG00000028409.12	novel	2418	12	NA	NA	0	-575	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	375.292326831381	3520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAGTGCTCATAAGGGG	-27	True	NA	-14	True	AATAAA	-17	NA	40757883	40737116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_40737396_40738289_40738443_40739518_40739687_40743020_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
ENSMUSG00000028409.12_40737117_40757883_2	chr4	-	1592	11	NIC	ENSMUSG00000028409.12	novel	2418	12	NA	NA	0	-575	combination_of_known_splicesites	FALSE	canonical	3	21	junction_10	388.074168168921	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAGTGCTCATAAGGGG	-27	True	NA	-14	True	AATAAA	-17	NA	40757883	40737116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40757776
ENSMUSG00000028409.12_40737117_40757883_3	chr4	-	1795	12	NNC	ENSMUSG00000028409.12	novel	2418	12	NA	NA	0	-575	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	381.738909519743	3549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAGTGCTCATAAGGGG	-27	True	NA	-14	True	AATAAA	-17	NA	40757883	40737116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_40737396_40738289_40738435_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
ENSMUSG00000028410.14_40722559_40733106_1	chr4	+	1439	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	79	1858	0	-794	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	8250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	22	False	NA	12	True	AATAAA	-18	NA	40722558	40733106	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ENSMUSG00000028410.14_40737117_40757883_1	chr4	+	1803	12	NIC	ENSMUSG00000028410.14	novel	5622	9	NA	NA	13068	20734	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	3674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGACACTTCCGCTCCGTTA	5827	False	NA	NA	False	NA	NA	NA	40737116	40757883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
ENSMUSG00000028411.16_40686463_40703162_1	chr4	-	1132	8	FSM	ENSMUSG00000028411.16	ENSMUST00000129021.9	1378	8	25	221	0	-221	multi-exon	FALSE	canonical	3	41	junction_6	41.4453168128111	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTTATTCTTGAGCAG	8	True	NA	NA	False	ACTAAA	-23	NA	40703162	40686462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695419_40697216_40697354_40703136
ENSMUSG00000028415.5_40923369_40931395_1	chr4	+	376	4	NNC	ENSMUSG00000028415.5	novel	397	4	NA	NA	3315	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.05480466765633	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGTGGCCCAGTCTTTG	3313	False	NA	NA	False	AATAAA	-18	NA	40923368	40931395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_40923452_40924923_40924965_40929078_40929192_40931256
ENSMUSG00000028419.6_40948561_40964959_1	chr4	+	1021	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	154	344	154	-344	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGGTAGTGTAAGTAC	-2	True	NA	25	True	ATTAAA	-22	NA	40948560	40964959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
ENSMUSG00000028419.6_40948561_40965303_1	chr4	+	1365	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	154	0	154	0	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	3426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATTGTAGTATCGCTTT	-2	True	NA	14	True	AATAAA	-16	NA	40948560	40965303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
ENSMUSG00000028420.14_53826045_53860592_1	chr4	+	1435	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	0	1427	0	-1427	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGTATACAGTTATTT	-16	True	NA	5	True	AATAAA	-14	NA	53826044	53860592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
ENSMUSG00000028423.16_40970906_41012438_3	chr4	+	2916	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	0	1433	0	-170	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGGAAAAATCAAGCTG	6045	False	NA	NA	False	NA	NA	NA	40970905	41012438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ENSMUSG00000028423.16_40970906_41012608_1	chr4	+	3432	16	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_15	149.55756974044	1108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	6045	False	NA	16	True	NA	NA	NA	40970905	41012608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011711
ENSMUSG00000028423.16_40970906_41012608_3	chr4	+	3086	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	0	1263	0	0	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	6045	False	NA	16	True	NA	NA	NA	40970905	41012608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ENSMUSG00000028426.11_55350050_55370443_1	chr4	+	780	4	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	7	21794	0	1869	5prime_fragment	FALSE	canonical	3	1170	junction_2	116.176111524224	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTACTAGCCCAGCACC	-11	True	NA	NA	False	NA	NA	NA	55350049	55370443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203
ENSMUSG00000028426.11_55350292_55370443_1	chr4	+	538	4	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	249	21794	202	1869	5prime_fragment	FALSE	canonical	3	1170	junction_2	116.176111524224	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTACTAGCCCAGCACC	231	False	NA	NA	False	NA	NA	NA	55350291	55370443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203
ENSMUSG00000028426.11_55385501_55390762_1	chr4	+	980	2	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	35458	1475	35411	-1475	3prime_fragment	FALSE	canonical	3	1164	junction_1	0	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGCATGTTTGCTTTTG	7168	False	NA	22	True	AGTAAA	-14	NA	55385500	55390762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_55385602_55389883
ENSMUSG00000028430.15_41114427_41124277_1	chr4	-	4421	26	FSM	ENSMUSG00000028430.15	ENSMUST00000030138.9	4599	26	178	0	178	0	multi-exon	FALSE	canonical	3	287	junction_9	34.7585960591046	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTTGTCTTTCCTCTT	27	False	41124289	-4	True	NA	NA	NA	41124277	41114426	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ENSMUSG00000028430.15_41114625_41124277_1	chr4	-	4223	26	FSM	ENSMUSG00000028430.15	ENSMUST00000030138.9	4599	26	178	198	178	-198	multi-exon	FALSE	canonical	3	287	junction_9	34.7585960591046	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTTTTTTTTTAGAC	27	False	41124289	NA	False	NA	NA	NA	41124277	41114624	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ENSMUSG00000028430.15_41120303_41124277_1	chr4	-	1445	11	ISM	ENSMUSG00000028430.15	ENSMUST00000030138.9	4599	26	178	5876	178	1028	5prime_fragment	FALSE	canonical	3	306	junction_1	32.4400986434998	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCCAGGCTTTTGACCA	27	False	41124289	NA	False	NA	NA	NA	41124277	41120302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ENSMUSG00000028431.12_56750775_56802331_1	chr4	-	5065	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	0	1095	0	237	multi-exon	TRUE	canonical	3	245	junction_24	36.3764927995411	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTTATGTGCTACTAGC	NA	False	NA	-7	True	ATTAAA	-13	NA	56802331	56750774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ENSMUSG00000028431.12_56751012_56802331_1	chr4	-	4828	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	0	1332	0	0	multi-exon	FALSE	canonical	3	245	junction_24	36.3764927995411	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTGACTCAGTGGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	56802331	56751011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ENSMUSG00000028431.12_56789083_56802331_1	chr4	-	1497	11	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	0	-12617	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	95.5351244307558	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCATCTCAGAATTGGA	NA	False	NA	NA	False	AATAAA	-15	NA	56802331	56789082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_56789436_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ENSMUSG00000028433.15_41221785_41275116_1	chr4	-	963	9	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	0	-193	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	334.30073941737	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTGTTGATGTTT	-12	True	NA	NA	False	AATAAA	-18	NA	41275116	41221784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41221954_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ENSMUSG00000028435.9_41092722_41098183_1	chr4	-	1743	7	NNC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	729.869946558213	8102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	41098183	41092721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41093270_41093291_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ENSMUSG00000028435.9_41092722_41098183_10	chr4	-	568	3	NNC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	978.5	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	41098183	41092721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41092981_41095144_41095272_41098001
ENSMUSG00000028435.9_41092722_41098183_11	chr4	-	1740	7	NNC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	729.869946558213	7809	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	41098183	41092721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41093287_41093311_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ENSMUSG00000028435.9_41092722_41098183_12	chr4	-	1203	7	NNC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	729.869946558213	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	41098183	41092721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41093011_41093572_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ENSMUSG00000028435.9_41092722_41098183_14	chr4	-	1392	7	NNC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	729.869946558213	913	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	41098183	41092721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41093136_41093508_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ENSMUSG00000028435.9_41092722_41098183_2	chr4	-	1728	7	NNC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	729.869946558213	1041	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	41098183	41092721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41093273_41093309_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ENSMUSG00000028435.9_41092722_41098183_3	chr4	-	1117	7	NNC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	729.869946558213	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	41098183	41092721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41092958_41093605_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ENSMUSG00000028435.9_41092722_41098183_4	chr4	-	1201	7	NNC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	729.869946558213	593	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	41098183	41092721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41093018_41093581_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ENSMUSG00000028435.9_41092722_41098183_6	chr4	-	785	4	NNC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	912.117073382335	610	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	41098183	41092721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41093134_41094774_41094839_41095144_41095272_41098001
ENSMUSG00000028435.9_41092722_41098183_7	chr4	-	1348	7	NNC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	729.869946558213	1029	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	41098183	41092721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41093159_41093575_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ENSMUSG00000028435.9_41092722_41098183_8	chr4	-	1737	7	NNC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	729.869946558213	8119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	41098183	41092721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41093270_41093297_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ENSMUSG00000028435.9_41092722_41098183_9	chr4	-	1579	7	NNC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	729.869946558213	440	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	41098183	41092721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41092900_41093085_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ENSMUSG00000028436.9_41292496_41314889_1	chr4	-	2246	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	0	1196	0	-1196	multi-exon	FALSE	canonical	3	440	junction_1	50.3213113402264	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTTACTCAGAGTCCAG	1860	False	NA	-11	True	ATTAAA	-17	NA	41314889	41292495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ENSMUSG00000028436.9_41293011_41314889_1	chr4	-	1731	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	0	1711	0	-1711	multi-exon	FALSE	canonical	3	440	junction_1	50.3213113402264	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCAGTTTCCTTGTTTGA	1860	False	NA	-5	True	NA	NA	NA	41314889	41293010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ENSMUSG00000028447.12_41714947_41723163_1	chr4	-	812	7	NNC	ENSMUSG00000028447.12	novel	973	7	NA	NA	0	-149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	342.260621943766	2621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTGTTGGCCTGCTGA	-9	True	NA	NA	False	AATAAA	-18	NA	41723163	41714946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41715260_41715395_41715456_41716395_41716455_41717356_41717436_41719836_41719924_41720782_41720868_41723034
ENSMUSG00000028447.12_41714947_41723163_3	chr4	-	439	4	NNC	ENSMUSG00000028447.12	novel	885	6	NA	NA	0	-149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	417.39749240582	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTGTTGGCCTGCTGA	-9	True	NA	NA	False	AATAAA	-18	NA	41723163	41714946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41715125_41719876_41719924_41720782_41720868_41723034
ENSMUSG00000028447.12_41714947_41723163_4	chr4	-	817	7	FSM	ENSMUSG00000028447.12	ENSMUST00000030158.11	973	7	7	149	0	-149	multi-exon	FALSE	canonical	3	869	junction_5	34.1829229619443	2692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTGTTGGCCTGCTGA	-9	True	NA	NA	False	AATAAA	-18	NA	41723163	41714946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41715260_41715395_41715456_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
ENSMUSG00000028447.12_41714947_41723163_5	chr4	-	736	6	FSM	ENSMUSG00000028447.12	ENSMUST00000171641.2	885	6	0	149	0	-149	multi-exon	FALSE	canonical	3	44	junction_1	342.598657323697	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTGTTGGCCTGCTGA	-9	True	NA	NA	False	AATAAA	-18	NA	41723163	41714946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41715239_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
ENSMUSG00000028447.12_41714947_41723163_6	chr4	-	524	4	NNC	ENSMUSG00000028447.12	novel	885	6	NA	NA	0	-149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	417.39749240582	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTGTTGGCCTGCTGA	-9	True	NA	NA	False	AATAAA	-18	NA	41723163	41714946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41715203_41719869_41719924_41720782_41720868_41723034
ENSMUSG00000028451.13_42980320_43000434_2	chr4	+	2880	17	Genic_Genomic	ENSMUSG00000028451.13	novel	1018	3	NA	NA	10374	16794	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCGAGAAAAGCCGAATC	NA	False	NA	NA	False	NA	NA	NA	42980319	43000434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990751_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ENSMUSG00000028451.13_42980320_43000434_3	chr4	+	2891	17	Genic_Genomic	ENSMUSG00000028451.13	novel	1018	3	NA	NA	10374	16794	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2037	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCGAGAAAAGCCGAATC	NA	False	NA	NA	False	NA	NA	NA	42980319	43000434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985148_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ENSMUSG00000028452.8_42980320_43000434_1	chr4	-	2886	17	FSM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	73	357	-1	-357	multi-exon	FALSE	canonical	2	1390	junction_12	381.614124271823	2400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTGAAGAGTGAATTACC	1	True	NA	-6	True	AATAAA	-17	NA	43000434	42980319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ENSMUSG00000028452.8_42980320_43000434_2	chr4	-	2880	17	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	-1	-357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	658.333333003692	2031	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTGAAGAGTGAATTACC	1	True	NA	-6	True	AATAAA	-17	NA	43000434	42980319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990872_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ENSMUSG00000028453.11_43002343_43010488_1	chr4	-	2821	15	NIC	ENSMUSG00000028453.11	novel	2974	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_14	28.3574127371109	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTTGTATGTGTGTG	30	False	NA	-6	True	ATTAAA	-16	NA	43010488	43002342	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001_43010173_43010255
ENSMUSG00000028454.17_43017635_43020992_1	chr4	-	1059	5	NNC	ENSMUSG00000028454.17	novel	4239	10	NA	NA	-1286	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	84.0992716972032	109	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTAAGATCTGTGAGG	9450	False	NA	-7	True	AATAAA	-21	NA	43020992	43017634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020839
ENSMUSG00000028454.17_43017635_43025819_1	chr4	-	3597	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	84	junction_10	34.3634980757198	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTAAGATCTGTGAGG	-7	True	NA	-7	True	AATAAA	-21	NA	43025819	43017634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ENSMUSG00000028455.16_43027690_43031402_1	chr4	-	1566	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	308	0	-32	0	multi-exon	FALSE	canonical	3	2352	junction_9	320.749854459519	8553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGAGATGGCTGTGGTG	0	True	NA	-4	True	AATAAA	-19	NA	43031402	43027689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ENSMUSG00000028455.16_43028026_43031402_1	chr4	-	1001	9	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	980.200489695858	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAACTGTCCTCATTGA	0	True	NA	-7	True	AATAAA	-16	NA	43031402	43028025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_43028235_43029319_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ENSMUSG00000028455.16_43028026_43031402_2	chr4	-	851	8	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1033.77848651618	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAACTGTCCTCATTGA	0	True	NA	-7	True	AATAAA	-16	NA	43031402	43028025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_43028113_43029481_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ENSMUSG00000028455.16_43028026_43031402_3	chr4	-	1223	10	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	968.408545558697	7318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAACTGTCCTCATTGA	0	True	NA	-7	True	AATAAA	-16	NA	43031402	43028025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_43028294_43028937_43029060_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ENSMUSG00000028455.16_43028026_43031402_4	chr4	-	1220	10	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	989.211582804991	7018	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAACTGTCCTCATTGA	0	True	NA	-7	True	AATAAA	-16	NA	43031402	43028025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030445_43030536_43030970_43031109_43031328
ENSMUSG00000028455.16_43028026_43031402_5	chr4	-	1232	10	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	968.408545558697	6153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAACTGTCCTCATTGA	0	True	NA	-7	True	AATAAA	-16	NA	43031402	43028025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_43028294_43028937_43029054_43029263_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ENSMUSG00000028455.16_43028026_43031402_6	chr4	-	1185	10	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_5	975.12693697276	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAACTGTCCTCATTGA	0	True	NA	-7	True	AATAAA	-16	NA	43031402	43028025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029860_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ENSMUSG00000028455.16_43028026_43031402_7	chr4	-	1128	9	NIC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_5	1042.82857531811	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAACTGTCCTCATTGA	0	True	NA	-7	True	AATAAA	-16	NA	43031402	43028025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ENSMUSG00000028455.16_43028026_43031402_8	chr4	-	1143	10	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	985.958416973049	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAACTGTCCTCATTGA	0	True	NA	-7	True	AATAAA	-16	NA	43031402	43028025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031022_43031328
ENSMUSG00000028455.16_43028026_43031402_9	chr4	-	1335	10	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	987.180659413963	3411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAACTGTCCTCATTGA	0	True	NA	-7	True	AATAAA	-16	NA	43031402	43028025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031223
ENSMUSG00000028461.13_43493377_43495921_1	chr4	+	794	6	NNC	ENSMUSG00000028461.13	novel	817	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	127.031334717069	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	-11	True	NA	14	True	AGTAAA	-45	NA	43493376	43495921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_43493537_43493607_43493760_43495194_43495256_43495349_43495433_43495508_43495622_43495696
ENSMUSG00000028464.17_43514711_43523495_1	chr4	-	1064	9	FSM	ENSMUSG00000028464.17	ENSMUST00000107914.10	1164	9	100	0	-31	0	multi-exon	FALSE	canonical	3	13	junction_1	2.31503239718152	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGCCCTTTAAGCCT	9869	False	NA	-14	True	AATAAA	-16	NA	43523495	43514710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_43514862_43518229_43518300_43518401_43518465_43519002_43519079_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
ENSMUSG00000028465.17_43562658_43566867_1	chr4	-	1365	9	NIC	ENSMUSG00000028465.17	novel	937	2	NA	NA	-4176	-3315	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCCTCAGCTTCCAACA	NA	False	NA	NA	False	NA	NA	NA	43566867	43562657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
ENSMUSG00000028466.16_43558835_43566867_1	chr4	+	1619	10	NNC	ENSMUSG00000028466.16	novel	1884	9	NA	NA	-3497	70	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_1	30.2426401617091	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTTTGCTCACGTGC	2911	False	NA	14	True	AATAAA	-16	NA	43558834	43566867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_43558890_43562458_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
ENSMUSG00000028466.16_43566928_43578537_1	chr4	+	3208	17	NIC	ENSMUSG00000028466.16	novel	1884	9	NA	NA	913	11477	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGTCGCCACGGCCTC	4217	False	NA	NA	False	NA	NA	NA	43566927	43578537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570191_43570345_43570449_43570671_43570912_43571188_43571408_43573750_43573867_43574027_43574120_43578015
ENSMUSG00000028467.16_43562658_43567060_1	chr4	-	1558	9	Fusion	ENSMUSG00000028467.16_ENSMUSG00000028465.17	novel	3543	13	NA	NA	2582	-3315	multi-exon	FALSE	non_canonical	0	0	junction_1	0	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCCTCAGCTTCCAACA	NA	False	NA	NA	False	NA	NA	NA	43567060	43562657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_-_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
ENSMUSG00000028467.16_43566928_43570714_1	chr4	-	2062	13	ISM	ENSMUSG00000028467.16	ENSMUST00000030189.14	3544	17	8159	0	-1072	0	3prime_fragment	FALSE	canonical	3	32	junction_8	9.28708781050335	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTGGTGTGTCTGAG	8152	False	NA	-1	True	AATAAA	-16	NA	43570714	43566927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570191_43570345_43570449_43570671
ENSMUSG00000028478.19_44012678_44032846_1	chr4	+	1037	5	NNC	ENSMUSG00000028478.19	novel	1099	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	562.693244583583	1841	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	0	True	NA	21	True	AATAAA	-21	NA	44012677	44032846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032408
ENSMUSG00000028480.15_43957692_43979118_1	chr4	+	1978	6	NNC	ENSMUSG00000028480.15	novel	2320	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	106.640705173963	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCCTCTAATGCGATT	-15	True	NA	36	True	AATAAA	-21	NA	43957691	43979118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43970578_43977462_43978518_43978568
ENSMUSG00000028483.14_83335981_83371577_1	chr4	+	1300	8	FSM	ENSMUSG00000028483.14	ENSMUST00000137512.8	1993	8	0	693	0	0	multi-exon	FALSE	canonical	2	14	junction_2	136.304730628972	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGATTCTTTTCTCCAA	NA	False	NA	18	True	TATAAA	-18	NA	83335980	83371577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_83336292_83336942_83337021_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277
ENSMUSG00000028483.14_83335981_83372273_1	chr4	+	2081	9	FSM	ENSMUSG00000028483.14	ENSMUST00000030206.10	1405	9	20	-696	0	3	multi-exon	FALSE	canonical	3	309	junction_6	50.2767341819255	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTTTAAAAGATTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	83335980	83372273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277
ENSMUSG00000028494.13_86574943_86588231_1	chr4	-	1681	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	66	141	-8	-141	multi-exon	FALSE	canonical	3	453	junction_2	61.6944412539141	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCTCCTGTGTGGTC	NA	False	NA	-21	True	AATAAA	-15	NA	86588231	86574942	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
ENSMUSG00000028494.13_86574943_86588297_1	chr4	-	1742	8	NNC	ENSMUSG00000028494.13	novel	1888	8	NA	NA	0	-141	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	201.72642618261	1464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCTCCTGTGTGGTC	NA	False	NA	-21	True	AATAAA	-15	NA	86588297	86574942	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588186
ENSMUSG00000028494.13_86575144_86588231_1	chr4	-	1480	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	66	342	-8	0	multi-exon	FALSE	canonical	3	453	junction_2	61.6944412539141	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCACAGCTCAGTTATGG	NA	False	NA	NA	False	NA	NA	NA	86588231	86575143	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
ENSMUSG00000028494.13_86585424_86588241_1	chr4	-	408	4	NNC	ENSMUSG00000028494.13	novel	996	3	NA	NA	-18	478	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	281.127491837185	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATT	NA	False	NA	NA	False	NA	NA	NA	86588241	86585423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_86585520_86586603_86586800_86586886_86586943_86588181
ENSMUSG00000028495.15_86772897_86775608_1	chr4	-	832	5	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	129	junction_1	9172.83013510552	170442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTTCATTAATAGTGT	NA	False	NA	NA	False	AATAAA	-21	NA	86775608	86772896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_86773188_86774103_86774251_86774382_86774594_86774964_86775097_86775557
ENSMUSG00000028497.13_88332192_88357152_1	chr4	-	1053	7	FSM	ENSMUSG00000028497.13	ENSMUST00000030221.3	2089	7	11	1025	0	-1025	multi-exon	TRUE	canonical	2	3	junction_1	2.26691175145591	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTGATTAACTTCTGCA	NA	False	NA	NA	False	AGTAAA	-19	NA	88357152	88332191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_88332584_88337935_88338062_88341227_88341335_88344972_88345086_88353175_88353304_88355696_88355801_88357069
ENSMUSG00000028517.9_105014544_105088736_1	chr4	+	1934	6	FSM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	0	1225	0	-1225	multi-exon	FALSE	canonical	3	181	junction_2	17.8616908494129	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGAGGCCTCTGTCATC	NA	False	NA	NA	False	NA	NA	NA	105014543	105088736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
ENSMUSG00000028519.17_104224787_104537580_1	chr4	+	1053	8	NIC	ENSMUSG00000028519.17	novel	5278	15	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_7	7.28991475552747	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACTGTTGTAACTTTC	NA	False	NA	9	True	AATAAA	-16	NA	104224786	104537580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266_104537306_104537387
ENSMUSG00000028519.17_104224787_104537580_2	chr4	+	1135	7	ISM	ENSMUSG00000028519.17	ENSMUST00000106830.9	5278	15	0	64461	0	1	5prime_fragment	FALSE	canonical	3	42	junction_1	2.40947204913349	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACTGTTGTAACTTTC	NA	False	NA	9	True	AATAAA	-16	NA	104224786	104537580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266
ENSMUSG00000028530.15_101010642_101122423_1	chr4	-	3772	25	FSM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	56	1078	0	804	multi-exon	FALSE	canonical	3	155	junction_18	17.726657186283	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTTAAAAACGTTTTTT	NA	False	NA	NA	False	TTTAAA	-30	NA	101122423	101010641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
ENSMUSG00000028540.7_117746104_117749220_1	chr4	-	2287	6	NNC	ENSMUSG00000028540.7	novel	2555	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	29.1135707188246	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCTTTATTCAC	NA	False	NA	-7	True	AATAAA	-15	NA	117749220	117746103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748901
ENSMUSG00000028540.7_117746104_117749220_2	chr4	-	2282	6	FSM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	9	264	0	0	multi-exon	FALSE	canonical	3	66	junction_1	6.70522184569608	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCTTTATTCAC	NA	False	NA	-7	True	AATAAA	-15	NA	117749220	117746103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748906
ENSMUSG00000028549.18_99655568_99717371_1	chr4	-	689	8	NIC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_6	80.1386553520375	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTATGGAGCTCAGAG	NA	False	NA	58	True	NA	NA	NA	99717371	99655567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99702294_99702338_99717319
ENSMUSG00000028549.18_99655568_99717371_3	chr4	-	825	9	FSM	ENSMUSG00000028549.18	ENSMUST00000146258.2	2806	9	52	1929	0	0	multi-exon	FALSE	canonical	3	74	junction_5	47.6377935572167	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTATGGAGCTCAGAG	NA	False	NA	58	True	NA	NA	NA	99717371	99655567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99702294_99702338_99717319
ENSMUSG00000028549.18_99655568_99717371_4	chr4	-	782	8	NIC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	82.4376078235745	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTATGGAGCTCAGAG	NA	False	NA	58	True	NA	NA	NA	99717371	99655567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99717319
ENSMUSG00000028559.18_108857852_108918358_1	chr4	-	3695	31	NIC	ENSMUSG00000028559.18	novel	3134	21	NA	NA	4829	60490	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGACTTTCTTCATCCCACC	NA	False	NA	NA	False	NA	NA	NA	108918358	108857851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ENSMUSG00000028559.18_108857852_108918673_1	chr4	-	4010	31	NIC	ENSMUSG00000028559.18	novel	3134	21	NA	NA	4514	60490	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGACTTTCTTCATCCCACC	NA	False	NA	NA	False	NA	NA	NA	108918673	108857851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ENSMUSG00000028559.18_108918852_109059433_1	chr4	-	2796	23	FSM	ENSMUSG00000028559.18	ENSMUST00000162787.9	2408	23	36	-424	0	0	multi-exon	FALSE	canonical	1	25	junction_17	111.643220473462	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	False	NA	-6	True	CATAAA	-20	NA	109059433	108918851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ENSMUSG00000028560.12_98819384_98823780_1	chr4	+	2249	4	ISM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	7268	0	3050	0	3prime_fragment	FALSE	canonical	3	534	junction_1	21.1712593442672	352	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98819383	98823780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_98819786_98820422_98820594_98821060_98821263_98822306
ENSMUSG00000028563.17_98243607_98271491_1	chr4	-	976	7	NNC	ENSMUSG00000028563.17	novel	1027	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	212.976328888134	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTGACCTGTTATTAA	NA	False	NA	-4	True	AATAAA	-18	NA	98271491	98243606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_98243918_98246154_98246285_98253799_98253874_98258728_98258821_98263156_98263266_98268854_98268915_98271291
ENSMUSG00000028568.17_108673644_108690770_1	chr4	-	948	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	41	2152	-9	271	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	5140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTACTTTTTTTTTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	108690770	108673643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
ENSMUSG00000028568.17_108673644_108690822_1	chr4	-	1000	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	-11	2152	-11	271	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	5174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTACTTTTTTTTTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	108690822	108673643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
ENSMUSG00000028568.17_108673796_108690770_1	chr4	-	796	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	41	2304	-9	119	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	2041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGTGGTTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	108690770	108673795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
ENSMUSG00000028568.17_108673915_108690770_1	chr4	-	677	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	41	2423	-9	0	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGATGCTGTCTGCTCAG	NA	False	NA	NA	False	TATAAA	-13	NA	108690770	108673914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
ENSMUSG00000028580.16_130390677_130476771_1	chr4	+	1668	11	ISM	ENSMUSG00000028580.16	ENSMUST00000097864.9	4017	22	-20	30806	0	2457	5prime_fragment	FALSE	canonical	3	368	junction_8	79.158132873382	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGGGACAACAAACAGAT	NA	False	NA	NA	False	NA	NA	NA	130390676	130476771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722
ENSMUSG00000028580.16_130390677_130476771_2	chr4	+	1573	11	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	0	2457	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_2	122.375487741623	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGGGACAACAAACAGAT	NA	False	NA	NA	False	NA	NA	NA	130390676	130476771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722
ENSMUSG00000028580.16_130390677_130476771_3	chr4	+	1683	11	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	2457	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	160.44516197131	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGGGACAACAAACAGAT	NA	False	NA	NA	False	NA	NA	NA	130390676	130476771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722
ENSMUSG00000028581.18_130640625_130663452_1	chr4	+	2411	8	FSM	ENSMUSG00000028581.18	ENSMUST00000151698.8	2600	8	189	0	0	0	multi-exon	FALSE	canonical	3	425	junction_4	26.2071808199702	1271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTCATGTGGTTCTTG	NA	False	NA	22	True	AATAAA	-18	NA	130640624	130663452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ENSMUSG00000028581.18_130661828_130663452_1	chr4	+	1582	2	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	2485	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTCATGTGGTTCTTG	NA	False	NA	22	True	AATAAA	-18	NA	130661827	130663452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_130662739_130662781
ENSMUSG00000028582.15_108477137_108487599_1	chr4	+	2392	20	ISM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	0	3721	0	0	5prime_fragment	FALSE	canonical	3	165	junction_8	18.4404409246592	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCACTGCCACAGGGAGGG	3533	False	NA	NA	False	NA	NA	NA	108477136	108487599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474
ENSMUSG00000028583.15_142993089_143026042_1	chr4	-	2637	6	FSM	ENSMUSG00000028583.15	ENSMUST00000030317.14	1817	6	92	-912	-9	912	multi-exon	FALSE	canonical	3	463	junction_2	58.6153563496802	1232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCTTTCAAAATAAGTGAA	NA	False	NA	NA	False	NA	NA	NA	143026042	142993088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
ENSMUSG00000028583.15_142994001_143026042_1	chr4	-	1686	5	FSM	ENSMUSG00000028583.15	ENSMUST00000119654.2	762	5	-9	-915	-9	0	multi-exon	FALSE	canonical	1	7	junction_2	239.080530365816	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCCAACATTTGACACT	NA	False	NA	-23	True	AATAAA	-20	NA	143026042	142994000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_142994997_142995757_142995870_143000469_143000627_143002640_143002778_143025758
ENSMUSG00000028587.19_108436651_108471880_2	chr4	+	2739	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	0	-150	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	149.780936333329	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCTGGGAGAATTTGTA	5272	False	NA	8	True	NA	NA	NA	108436650	108471880	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_108436773_108445872_108445979_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ENSMUSG00000028587.19_108436651_108472030_2	chr4	+	2889	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	149.780936333329	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5272	False	NA	21	True	NA	NA	NA	108436650	108472030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_108436773_108445872_108445979_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ENSMUSG00000028591.12_144118244_144135005_1	chr4	-	2544	5	NIC	ENSMUSG00000028591.12	novel	2460	4	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	43.6369969177532	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGGTTTTGCTT	NA	False	NA	-4	True	AATAAA	-15	NA	144135005	144118243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_144119688_144121144_144121730_144122249_144122573_144129907_144130021_144134926
ENSMUSG00000028597.12_108257587_108263921_1	chr4	-	790	2	FSM	ENSMUSG00000028597.12	ENSMUST00000184609.2	331	2	0	-459	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAAATGTGTTTGCCATT	NA	False	NA	-11	True	AATAAA	-40	NA	108263921	108257586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_108258195_108263739
ENSMUSG00000028597.12_108257587_108263921_2	chr4	-	1052	3	FSM	ENSMUSG00000028597.12	ENSMUST00000030332.7	1289	3	237	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	16.5	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAAATGTGTTTGCCATT	NA	False	NA	-11	True	AATAAA	-40	NA	108263921	108257586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_108258195_108260397_108260660_108263739
ENSMUSG00000028601.19_108022415_108036505_1	chr4	+	1526	10	FSM	ENSMUSG00000028601.19	ENSMUST00000052999.13	1307	10	-219	0	-219	0	multi-exon	TRUE	canonical	3	713	junction_3	43.9463758530471	4166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGCTGGAATTGTTGG	NA	False	NA	24	True	AATAAA	-17	NA	108022414	108036505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ENSMUSG00000028601.19_108022715_108036505_1	chr4	+	1504	10	FSM	ENSMUSG00000028601.19	ENSMUST00000130942.8	1319	10	52	-237	0	0	multi-exon	FALSE	canonical	3	90	junction_3	222.335582197522	1812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGCTGGAATTGTTGG	NA	False	NA	24	True	AATAAA	-17	NA	108022714	108036505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_108022859_108026911_108026980_108027057_108027424_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ENSMUSG00000028603.16_107901575_107975674_1	chr4	-	2046	16	FSM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	55	539	-1	0	multi-exon	FALSE	canonical	3	305	junction_7	132.795314509043	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGGGGGACTAGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	107975674	107901574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ENSMUSG00000028607.17_107761180_107780644_1	chr4	-	2207	5	FSM	ENSMUSG00000028607.17	ENSMUST00000030345.15	2372	5	163	2	0	0	multi-exon	FALSE	canonical	3	130	junction_2	11.5866302262565	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGGTTCCTTTTTCCT	NA	False	NA	-2	True	AATAAA	-16	NA	107780644	107761179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_107761761_107764117_107765423_107769837_107769945_107771460_107771542_107780511
ENSMUSG00000028608.16_107747060_107754315_1	chr4	+	683	7	NNC	ENSMUSG00000028608.16	novel	926	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	279.931787326048	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	14	True	AATAAA	-19	NA	107747059	107754315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749268_107750530_107750609_107752069_107752136_107754067
ENSMUSG00000028608.16_107747060_107754315_3	chr4	+	798	8	NIC	ENSMUSG00000028608.16	novel	926	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	253.100609180118	1847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	14	True	AATAAA	-19	NA	107747059	107754315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_107747211_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ENSMUSG00000028614.15_107224981_107271536_1	chr4	+	2577	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	0	2007	0	6	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGCGTCTATGGCAGCC	NA	False	NA	17	True	AATAAA	-18	NA	107224980	107271536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ENSMUSG00000028614.15_107225249_107271536_1	chr4	+	2309	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	268	2007	0	6	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGCGTCTATGGCAGCC	NA	False	NA	17	True	AATAAA	-18	NA	107225248	107271536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ENSMUSG00000028614.15_107225249_107273543_1	chr4	+	4316	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	268	0	0	0	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107225248	107273543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ENSMUSG00000028617.11_107090714_107110569_1	chr4	-	1592	8	FSM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	160	3	160	0	multi-exon	FALSE	canonical	3	194	junction_4	9.55755924781585	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTGCTTTTGAATTGC	NA	False	NA	-8	True	AATAAA	-17	NA	107110569	107090713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490_107104978_107110471
ENSMUSG00000028618.12_107035923_107057895_1	chr4	+	1150	8	FSM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	327	298	0	0	multi-exon	FALSE	canonical	3	1513	junction_5	112.332959889567	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGTTGTATTTTTAT	NA	False	NA	63	True	NA	NA	NA	107035922	107057895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ENSMUSG00000028618.12_107035923_107058193_1	chr4	+	1448	8	FSM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	327	0	0	0	multi-exon	FALSE	canonical	3	1513	junction_5	112.332959889567	3744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGAGTGTTGGGCTTTCT	NA	False	NA	15	True	ATTAAA	-27	NA	107035922	107058193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ENSMUSG00000028619.16_106996015_107035563_1	chr4	-	1587	5	FSM	ENSMUSG00000028619.16	ENSMUST00000057043.10	6431	5	181	4663	0	452	multi-exon	FALSE	canonical	3	63	junction_1	11	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGGCATAGTTTCCCCC	NA	False	NA	NA	False	AATAAA	-17	NA	107035563	106996014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_106996997_107004711_107004906_107022744_107022887_107034761_107034902_107035434
ENSMUSG00000028619.16_106996015_107035744_1	chr4	-	1768	5	FSM	ENSMUSG00000028619.16	ENSMUST00000057043.10	6431	5	0	4663	0	452	multi-exon	FALSE	canonical	3	63	junction_1	11	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGGCATAGTTTCCCCC	NA	False	NA	NA	False	AATAAA	-17	NA	107035744	106996014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_106996997_107004711_107004906_107022744_107022887_107034761_107034902_107035434
ENSMUSG00000028619.16_107035864_107058193_1	chr4	-	1501	8	NNC	ENSMUSG00000028619.16	novel	935	5	NA	NA	-21880	-2051	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGGCCAGCCCCTTTCC	8658	False	NA	NA	False	NA	NA	NA	107058193	107035863	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_107036115_107042974_107043081_107044815_107044911_107047731_107047885_107049664_107049741_107050495_107050578_107054702_107054812_107057564
ENSMUSG00000028619.16_107035923_107058193_1	chr4	-	1209	6	NNC	ENSMUSG00000028619.16	novel	935	5	NA	NA	-21880	-2110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCCTCTGTCACAGCAG	8658	False	NA	NA	False	NA	NA	NA	107058193	107035922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_107036115_107047769_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ENSMUSG00000028619.16_107035923_107058193_2	chr4	-	1439	8	NNC	ENSMUSG00000028619.16	novel	935	5	NA	NA	-21880	-2110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCCTCTGTCACAGCAG	8658	False	NA	NA	False	NA	NA	NA	107058193	107035922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_107036115_107042974_107043072_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ENSMUSG00000028622.12_106913082_106924065_1	chr4	-	1484	7	NNC	ENSMUSG00000028622.12	novel	1498	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	224.430142558634	1653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTGTGAGATTGTCT	NA	False	NA	-19	True	AATAAA	-12	NA	106924065	106913081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783_106921960_106923641
ENSMUSG00000028633.8_120397346_120427473_1	chr4	-	2424	19	FSM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	0	281	0	-281	multi-exon	FALSE	canonical	3	663	junction_8	52.1791784782653	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGGTCTCTGGCTACAC	NA	False	NA	-13	True	TATAAA	-15	NA	120427473	120397345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ENSMUSG00000028633.8_120397663_120427473_1	chr4	-	2107	19	FSM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	0	598	0	-598	multi-exon	FALSE	canonical	3	663	junction_8	52.1791784782653	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTGCAGTTTTTGTGC	NA	False	NA	NA	False	NA	NA	NA	120427473	120397662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ENSMUSG00000028639.15_119135178_119139484_1	chr4	-	890	4	ISM	ENSMUSG00000028639.15	ENSMUST00000127737.2	1054	5	505	-9	-101	0	3prime_fragment	FALSE	canonical	3	262	junction_2	4927.15024690292	2339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119139484	119135177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_119135565_119136130_119136409_119138766_119138850_119139342
ENSMUSG00000028639.15_119135178_119139595_1	chr4	-	1001	4	ISM	ENSMUSG00000028639.15	ENSMUST00000127737.2	1054	5	394	-9	-212	0	3prime_fragment	FALSE	canonical	3	262	junction_2	4927.15024690292	2320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119139595	119135177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_119135565_119136130_119136409_119138766_119138850_119139342
ENSMUSG00000028639.15_119135178_119151697_1	chr4	-	1380	8	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	3612.9610898451	4598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151697	119135177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151544
ENSMUSG00000028639.15_119135178_119151697_2	chr4	-	1325	8	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3612.9610898451	4506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151697	119135177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119150982_119151578
ENSMUSG00000028639.15_119135178_119151697_3	chr4	-	520	2	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151697	119135177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_119135565_119151564
ENSMUSG00000028639.15_119135178_119151697_4	chr4	-	1369	8	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	3612.9610898451	4553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151697	119135177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151555
ENSMUSG00000028645.12_118965908_118994527_1	chr4	+	2607	10	FSM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	0	653	0	0	multi-exon	TRUE	canonical	3	565	junction_3	58.8236535946402	1708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCAAATGCTTGTG	576	False	NA	36	True	TATAAA	-18	NA	118965907	118994527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ENSMUSG00000028645.12_118966001_118994527_1	chr4	+	2514	10	FSM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	93	653	0	0	multi-exon	FALSE	canonical	3	565	junction_3	58.8236535946402	1685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCAAATGCTTGTG	669	False	NA	36	True	TATAAA	-18	NA	118966000	118994527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ENSMUSG00000028645.12_118966111_118994527_1	chr4	+	2404	10	FSM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	203	653	0	0	multi-exon	FALSE	canonical	3	565	junction_3	58.8236535946402	1701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCAAATGCTTGTG	779	False	NA	36	True	TATAAA	-18	NA	118966110	118994527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ENSMUSG00000028647.14_123798834_123805105_1	chr4	+	519	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	209	957	0	70	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTTGGGTCTTAAAGC	NA	False	NA	6	True	AATAAA	-13	NA	123798833	123805105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
ENSMUSG00000028647.14_123798834_123806062_1	chr4	+	1476	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	209	0	0	0	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTCTTTCTTTTTGGT	NA	False	NA	40	True	NA	NA	NA	123798833	123806062	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
ENSMUSG00000028648.14_123606503_123611974_1	chr4	-	481	3	NNC	ENSMUSG00000028648.14	novel	525	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	1049	4614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGCTTTTGGGTCA	1853	False	NA	-25	True	AATAAA	-17	NA	123611974	123606502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_123606720_123609656_123609852_123611905
ENSMUSG00000028648.14_123606503_123611974_2	chr4	-	581	3	NNC	ENSMUSG00000028648.14	novel	599	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	1048	9672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGCTTTTGGGTCA	1853	False	NA	-25	True	AATAAA	-17	NA	123611974	123606502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_123606720_123609656_123609875_123611828
ENSMUSG00000028651.13_123020908_123033744_2	chr4	-	1219	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	116	junction_6	303.134000439116	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	-14	True	AATAAA	-25	NA	123033744	123020907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030633_123030692_123031318_123031363_123032658_123032758_123033694
ENSMUSG00000028651.13_123020908_123033744_3	chr4	-	1185	9	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	354.711832865779	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	-14	True	AATAAA	-25	NA	123033744	123020907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029495_123031318_123031363_123032658_123032758_123033694
ENSMUSG00000028651.13_123020908_123033744_4	chr4	-	1188	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	340.81833255045	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	-14	True	AATAAA	-25	NA	123033744	123020907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027145_123028841_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033694
ENSMUSG00000028656.15_122752840_122779657_1	chr4	-	2557	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106255.8	2737	13	180	0	0	0	multi-exon	FALSE	canonical	3	275	junction_12	193.312139642945	1720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGATGTTTTCAGTA	NA	False	NA	-7	True	AATAAA	-25	NA	122779657	122752839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779625
ENSMUSG00000028656.15_122756769_122779657_1	chr4	-	979	9	ISM	ENSMUSG00000028656.15	ENSMUST00000106257.10	2768	13	192	3929	0	-560	5prime_fragment	FALSE	canonical	3	357	junction_8	200.53393571912	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGCCCCTCCCCCAAACC	NA	False	NA	NA	False	NA	NA	NA	122779657	122756768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
ENSMUSG00000028657.15_122730047_122752213_1	chr4	+	1711	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	12	658	0	-658	multi-exon	FALSE	canonical	3	268	junction_2	20.6579282601136	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACAGCAATGTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	122730046	122752213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ENSMUSG00000028657.15_122730047_122752512_1	chr4	+	2010	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	12	359	0	-359	multi-exon	FALSE	canonical	3	268	junction_2	20.6579282601136	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCCCCATTTCCTACAG	NA	False	NA	NA	False	ATTAAA	-38	NA	122730046	122752512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ENSMUSG00000028657.15_122752840_122766251_1	chr4	+	2508	13	NNC	ENSMUSG00000028657.15	novel	2573	10	NA	NA	22793	13283	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAGATCAAATGTCTTA	NA	False	NA	NA	False	NA	NA	NA	122752839	122766251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_122752978_122752996_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124
ENSMUSG00000028657.15_122752840_122779657_1	chr4	+	2547	14	NNC	ENSMUSG00000028657.15	novel	2573	10	NA	NA	22793	26689	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGAACCGCCCAGCGGT	NA	False	NA	NA	False	NA	NA	NA	122752839	122779657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_122752975_122753003_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
ENSMUSG00000028657.15_122752840_122779657_2	chr4	+	2565	13	NNC	ENSMUSG00000028657.15	novel	2573	10	NA	NA	22793	26689	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGAACCGCCCAGCGGT	NA	False	NA	NA	False	NA	NA	NA	122752839	122779657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_122754011_122755737_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
ENSMUSG00000028672.14_135673776_135689928_1	chr4	+	1393	9	NNC	ENSMUSG00000028672.14	novel	1418	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	268.173800920224	1701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAACGTGTGTTTATGGG	NA	False	NA	NA	False	ATTAAA	-23	NA	135673775	135689928	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_135673852_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135683039_135686033_135686098_135687287_135687477_135688093_135688220_135689419
ENSMUSG00000028675.13_135598511_135601161_1	chr4	-	1637	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	0	282	0	-282	multi-exon	FALSE	canonical	3	336	junction_2	18.5	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTAAACCCAAAGACTCA	NA	False	NA	NA	False	TATAAA	-29	NA	135601161	135598510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_135599766_135600205_135600411_135600984
ENSMUSG00000028676.18_135583443_135590676_1	chr4	+	693	4	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	0	-298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	730.12571215891	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTGCAAATGTTTTTT	4706	False	NA	NA	False	NA	NA	NA	135583442	135590676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_135583603_135585615_135585716_135589081_135589189_135590350
ENSMUSG00000028676.18_135583443_135591137_1	chr4	+	682	6	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	578.7306800231	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTCTGCATCTCACACC	4706	False	NA	NA	False	AAGAAA	-23	NA	135583442	135591137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_135583603_135585615_135585716_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ENSMUSG00000028676.18_135583443_135591515_1	chr4	+	1060	6	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	0	335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	578.7306800231	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAAGAGTCCAGTTTGT	4706	False	NA	9	True	ATTAAA	-23	NA	135583442	135591515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_135583603_135585615_135585716_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ENSMUSG00000028676.18_135583443_135593126_1	chr4	+	3098	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	533.493960186576	1656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4706	False	NA	NA	False	AATAAA	-17	NA	135583442	135593126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ENSMUSG00000028676.18_135583443_135593126_2	chr4	+	3088	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_3	565.56856839428	1614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4706	False	NA	NA	False	AATAAA	-17	NA	135583442	135593126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589091_135589189_135590350_135590514_135590833_135590888_135591039
ENSMUSG00000028676.18_135583443_135593126_3	chr4	+	2671	6	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	578.7306800231	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4706	False	NA	NA	False	AATAAA	-17	NA	135583442	135593126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_135583603_135585615_135585716_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ENSMUSG00000028676.18_135583443_135594696_1	chr4	+	844	6	NNC	ENSMUSG00000028676.18	novel	3754	6	NA	NA	0	-997	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	623.730198082472	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTGGAAACTAATCCC	4706	False	NA	NA	False	NA	NA	NA	135583442	135594696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_135583603_135585615_135585716_135589081_135589189_135590350_135590514_135590833_135590888_135594436
ENSMUSG00000028676.18_135583443_135595963_1	chr4	+	2111	6	NNC	ENSMUSG00000028676.18	novel	3754	6	NA	NA	0	270	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	623.730198082472	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGCAACAGGCACCAT	4706	False	NA	NA	False	NA	NA	NA	135583442	135595963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_135583603_135585615_135585716_135589081_135589189_135590350_135590514_135590833_135590888_135594436
ENSMUSG00000028676.18_135583443_135596093_1	chr4	+	2241	6	NNC	ENSMUSG00000028676.18	novel	3754	6	NA	NA	0	400	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	623.730198082472	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCGTTTATTTCGAGAT	4706	False	NA	6	True	AATAAA	-17	NA	135583442	135596093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_135583603_135585615_135585716_135589081_135589189_135590350_135590514_135590833_135590888_135594436
ENSMUSG00000028677.20_117128661_117146366_1	chr4	-	1814	10	ISM	ENSMUSG00000028677.20	ENSMUST00000221654.2	1949	11	277	-8	-56	0	3prime_fragment	TRUE	canonical	0	0	junction_5	318.755914977798	623	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	9847	False	NA	NA	False	ATTAAA	-14	NA	117146366	117128660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222
ENSMUSG00000028681.12_116966699_116972580_1	chr4	+	2521	10	ISM	ENSMUSG00000028681.12	ENSMUST00000144620.8	4356	22	13406	0	-733	0	3prime_fragment	FALSE	canonical	3	29	junction_6	5.35412613473634	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGATGGCTGGAGTTTT	NA	False	NA	2	True	AATATA	-16	NA	116966698	116972580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_116966828_116966933_116967283_116967391_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
ENSMUSG00000028683.15_116876605_116944045_1	chr4	+	1433	11	NIC	ENSMUSG00000028683.15	novel	1555	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_4	197.922232202449	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGTGGCTCAGTGGT	NA	False	NA	16	True	AATAAA	-16	NA	116876604	116944045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
ENSMUSG00000028683.15_116876605_116944045_2	chr4	+	1539	12	NNC	ENSMUSG00000028683.15	novel	1555	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	188.951084666625	1745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGTGGCTCAGTGGT	NA	False	NA	16	True	AATAAA	-16	NA	116876604	116944045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938760_116938859_116943885
ENSMUSG00000028684.15_116847414_116851561_1	chr4	-	1188	10	FSM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	49	252	0	0	multi-exon	FALSE	canonical	3	335	junction_9	15.6331398550769	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGCATGTTCTTTTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	116851561	116847413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
ENSMUSG00000028684.15_116847414_116851561_2	chr4	-	1179	10	NNC	ENSMUSG00000028684.15	novel	1489	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_6	111.319804012728	1341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGCATGTTCTTTTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	116851561	116847413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850453_116850508_116850584_116850665_116850781_116850895_116851527
ENSMUSG00000028684.15_116847414_116851561_3	chr4	-	1125	9	NIC	ENSMUSG00000028684.15	novel	1489	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_6	116.039594535658	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGCATGTTCTTTTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	116851561	116847413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850584_116850665_116850781_116850895_116851527
ENSMUSG00000028687.18_116664935_116676628_1	chr4	+	1732	17	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	43.6183286446191	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTTGGAGAACTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	116664934	116676628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ENSMUSG00000028688.14_116578145_116661299_1	chr4	-	2893	11	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	1090	73362	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGGGCAGGGGGCTGGG	5477	False	NA	NA	False	NA	NA	NA	116661299	116578144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
ENSMUSG00000028688.14_116661199_116664803_1	chr4	-	1384	9	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	38.7021882456277	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	1973	False	NA	0	True	TTTAAA	-42	NA	116664803	116661198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_116661334_116662005_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
ENSMUSG00000028689.15_116565793_116572296_2	chr4	+	1543	10	FSM	ENSMUSG00000028689.15	ENSMUST00000106464.3	1213	10	-334	4	0	0	multi-exon	FALSE	canonical	3	19	junction_2	20.3239201040316	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTTCTCTGTAAA	5643	False	NA	11	True	AATAAA	-15	NA	116565792	116572296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116566292_116566436_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
ENSMUSG00000028689.15_116565901_116572296_2	chr4	+	1435	10	FSM	ENSMUSG00000028689.15	ENSMUST00000106464.3	1213	10	-226	4	0	0	multi-exon	FALSE	canonical	3	19	junction_2	20.3239201040316	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTTCTCTGTAAA	5751	False	NA	11	True	AATAAA	-15	NA	116565900	116572296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116566292_116566436_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
ENSMUSG00000028689.15_116570950_116572296_1	chr4	+	657	2	ISM	ENSMUSG00000028689.15	ENSMUST00000156206.2	431	3	963	0	963	0	3prime_fragment	FALSE	canonical	3	73	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTTCTCTGTAAA	NA	False	NA	11	True	AATAAA	-15	NA	116570949	116572296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_116571347_116572036
ENSMUSG00000028690.5_116559631_116565529_1	chr4	-	1877	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	74	155	-44	-155	multi-exon	FALSE	canonical	3	184	junction_2	7.07106781186548	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTTTGTTTGCCTGTTT	NA	False	NA	-2	True	AATACA	-31	NA	116565529	116559630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
ENSMUSG00000028690.5_116560017_116565529_1	chr4	-	1491	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	74	541	-44	-541	multi-exon	FALSE	canonical	3	184	junction_2	7.07106781186548	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGCTAGTTATGAAT	NA	False	NA	NA	False	NA	NA	NA	116565529	116560016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
ENSMUSG00000028690.5_116560156_116565529_1	chr4	-	1352	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	74	680	-44	-680	multi-exon	FALSE	canonical	3	184	junction_2	7.07106781186548	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCTTTGTGTAGTACT	NA	False	NA	NA	False	NA	NA	NA	116565529	116560155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
ENSMUSG00000028690.5_116561586_116565529_1	chr4	-	561	3	ISM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	74	2110	-44	0	5prime_fragment	FALSE	canonical	3	184	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCCGGCTAGATTTTT	NA	False	NA	NA	False	AATATA	-39	NA	116565529	116561585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_116561857_116563077_116563273_116565434
ENSMUSG00000028691.13_116542796_116556712_1	chr4	+	919	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9399.24659533944	12930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550190_116550913_116551045_116556367
ENSMUSG00000028691.13_116542796_116556712_10	chr4	+	929	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	243	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9264.57490875863	19625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_116542862_116544610_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ENSMUSG00000028691.13_116542796_116556712_2	chr4	+	925	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	243	at_least_one_novel_splicesite	FALSE	canonical	3	88	junction_1	9231.04725153111	22771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_116542858_116544610_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ENSMUSG00000028691.13_116542796_116556712_3	chr4	+	961	6	NIC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	243	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	9256.99122609501	11107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_116542858_116544574_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ENSMUSG00000028691.13_116542796_116556712_4	chr4	+	918	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9266.17147693696	3106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_116542844_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ENSMUSG00000028691.13_116542796_116556712_5	chr4	+	916	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9400.40825921938	10395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_116542858_116544603_116544721_116548972_116549127_116550095_116550203_116550913_116551045_116556367
ENSMUSG00000028691.13_116542796_116556712_6	chr4	+	927	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9400.40825921938	29596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_116542858_116544603_116544721_116548972_116549138_116550095_116550203_116550913_116551045_116556367
ENSMUSG00000028691.13_116542796_116556712_7	chr4	+	906	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9400.40825921938	2245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_116542858_116544603_116544721_116548972_116549127_116550105_116550203_116550913_116551045_116556367
ENSMUSG00000028691.13_116542796_116556712_8	chr4	+	920	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9381.99984225112	11354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_116542858_116544603_116544709_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ENSMUSG00000028691.13_116542796_116556712_9	chr4	+	927	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	243	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	9399.24659533944	52917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550918_116551045_116556367
ENSMUSG00000028691.13_116542796_116557196_1	chr4	+	1416	6	FSM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	55	823	0	727	multi-exon	FALSE	canonical	3	22651	junction_3	699.316637868713	77455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTCATGCCTAGCT	NA	False	NA	8	True	NA	NA	NA	116542795	116557196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ENSMUSG00000028691.13_116543058_116556712_1	chr4	+	1146	6	FSM	ENSMUSG00000028691.13	ENSMUST00000106470.8	877	6	-26	-243	0	243	multi-exon	FALSE	canonical	0	0	junction_1	9266.17147693696	2550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116543057	116556712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116543334_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ENSMUSG00000028691.13_116544509_116556712_1	chr4	+	953	5	NNC	ENSMUSG00000028691.13	novel	636	5	NA	NA	0	243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10095.720702357	1736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116544508	116556712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_116544721_116548972_116549131_116550095_116550203_116550913_116551045_116556367
ENSMUSG00000028692.15_116493707_116508638_1	chr4	-	1181	9	FSM	ENSMUSG00000028692.15	ENSMUST00000030455.15	1420	9	239	0	-45	0	multi-exon	FALSE	canonical	3	1447	junction_3	104.145331148352	4054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTGTGCCTGACTTA	NA	False	NA	-1	True	AATAAA	-15	NA	116508638	116493706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
ENSMUSG00000028693.16_116458249_116484690_1	chr4	-	3089	15	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	448	-557	0	0	3prime_fragment	TRUE	canonical	3	774	junction_12	215.450595691155	3776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCTTGTTCTGGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	116484690	116458248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ENSMUSG00000028693.16_116458806_116484690_1	chr4	-	2527	15	NNC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	350.258512402203	2806	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCTTTGATGGCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	116484690	116458805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462007_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ENSMUSG00000028696.13_116364746_116398614_1	chr4	+	2337	10	NNC	ENSMUSG00000028696.13	novel	2118	9	NA	NA	0	3174	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	22.8958996814325	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGAGGGGTAGCGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	116364745	116398614	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996_116395118_116398080
ENSMUSG00000028702.16_115954172_115980868_1	chr4	-	2026	14	NIC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_10	159.602464722704	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAGGCATGAAAGGGA	NA	False	NA	-55	True	AAGAAA	-38	NA	115980868	115954171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ENSMUSG00000028702.16_115954172_115980868_2	chr4	-	2875	19	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	105	junction_18	100.421042627873	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAGGCATGAAAGGGA	NA	False	NA	-55	True	AAGAAA	-38	NA	115980868	115954171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980675
ENSMUSG00000028703.15_115932660_115947417_1	chr4	+	2077	4	ISM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	194	6823	0	1622	5prime_fragment	FALSE	canonical	3	193	junction_3	29.3295452099452	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTAGATCTCTATTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	115932659	115947417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_115932805_115936585_115936673_115937745_115937817_115945643
ENSMUSG00000028703.15_115932660_115954240_1	chr4	+	2871	10	FSM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	194	0	0	0	multi-exon	FALSE	canonical	3	193	junction_3	24.5573151707401	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCCTTCTTGATGATT	NA	False	NA	9	True	AATAAA	-17	NA	115932659	115954240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_115932805_115936585_115936673_115937745_115937817_115945643_115946767_115950068_115950330_115952073_115952239_115952329_115952429_115952988_115953112_115953339_115953416_115953519
ENSMUSG00000028703.15_115954172_115980868_1	chr4	+	2685	19	NNC	ENSMUSG00000028703.15	novel	3065	10	NA	NA	7493	26628	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCGTTAAGAGCCTCCAGG	NA	False	NA	NA	False	NA	NA	NA	115954171	115980868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980697
ENSMUSG00000028703.15_115954172_115980868_2	chr4	+	2940	19	NNC	ENSMUSG00000028703.15	novel	3065	10	NA	NA	7493	26628	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCGTTAAGAGCCTCCAGG	NA	False	NA	NA	False	NA	NA	NA	115954171	115980868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980610
ENSMUSG00000028703.15_115954172_115980868_3	chr4	+	3037	18	NIC	ENSMUSG00000028703.15	novel	3065	10	NA	NA	7493	26628	intron_retention	FALSE	non_canonical	0	0	junction_1	0	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCGTTAAGAGCCTCCAGG	NA	False	NA	NA	False	NA	NA	NA	115954171	115980868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ENSMUSG00000028703.15_115954172_115980868_4	chr4	+	2707	19	NIC	ENSMUSG00000028703.15	novel	3065	10	NA	NA	7493	26628	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCGTTAAGAGCCTCCAGG	NA	False	NA	NA	False	NA	NA	NA	115954171	115980868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ENSMUSG00000028706.15_115890202_115911073_1	chr4	-	2276	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	0	163	0	0	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTGTGCGTGCCTTG	NA	False	NA	-6	True	AGTAAA	-17	NA	115911073	115890201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
ENSMUSG00000028706.15_115890931_115911073_1	chr4	-	1547	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	0	892	0	173	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGGGCCTGCAGTTGGGT	NA	False	NA	-25	True	AATAAA	-19	NA	115911073	115890930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
ENSMUSG00000028708.17_115696418_115736447_1	chr4	+	2480	13	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	42.5606593255112	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCAGCCTTGGTGGT	NA	False	NA	10	True	AATAAA	-16	NA	115696417	115736447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_115696439_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ENSMUSG00000028729.16_118478047_118483182_1	chr4	+	1118	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	51	1791	0	367	multi-exon	FALSE	canonical	3	2261	junction_5	110.190105612981	7266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGGGTTAAAACCAGAT	NA	False	NA	23	True	AATAAA	-23	NA	118478046	118483182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ENSMUSG00000028737.16_139350420_139376998_1	chr4	+	3136	15	FSM	ENSMUSG00000028737.16	ENSMUST00000039818.10	3382	15	243	3	0	0	multi-exon	FALSE	canonical	3	190	junction_3	22.7807876447301	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATTTTGATCGTGTGT	NA	False	NA	23	True	NA	NA	NA	139350419	139376998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
ENSMUSG00000028741.14_139074756_139079636_1	chr4	-	979	8	NNC	ENSMUSG00000028741.14	novel	930	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	462.308007585366	5556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGACTCTTTCTTTTTTTT	5947	False	NA	-12	True	AATAAA	-34	NA	139079636	139074755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_139075114_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077051_139077746_139077806_139079579
ENSMUSG00000028745.19_138920250_139018577_1	chr4	+	1082	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	40	552	0	-174	multi-exon	FALSE	canonical	3	1402	junction_1	117.624136553685	2038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTCCAAGGCCTGCT	NA	False	NA	18	True	AATAAA	-18	NA	138920249	139018577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
ENSMUSG00000028745.19_138920250_139018755_1	chr4	+	1260	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	40	374	0	4	multi-exon	FALSE	canonical	3	1402	junction_1	117.624136553685	2285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTGTGTGAGAGAAGAAA	NA	False	NA	14	True	AAAACA	-19	NA	138920249	139018755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
ENSMUSG00000028757.5_138032185_138039401_1	chr4	+	1438	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	144	538	144	-538	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCGAGGACTATGGGGT	NA	False	NA	-30	True	NA	NA	NA	138032184	138039401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ENSMUSG00000028757.5_138032185_138039544_1	chr4	+	1581	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	144	395	144	-395	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCCCCATGACACTGAT	NA	False	NA	39	True	AATAAA	-25	NA	138032184	138039544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ENSMUSG00000028757.5_138032185_138039939_1	chr4	+	1976	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	144	0	144	0	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	2552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGTGTTCTTTTAGTTC	NA	False	NA	37	True	NA	NA	NA	138032184	138039939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ENSMUSG00000028766.11_137469044_137523695_1	chr4	-	2516	12	NNC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	462.91114403601	7497	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGAGTCTTTGTGGTC	NA	False	NA	-2	True	AATAAA	-24	NA	137523695	137469043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483055_137485882_137486044_137523552
ENSMUSG00000028766.11_137469352_137523695_1	chr4	-	2214	12	FSM	ENSMUSG00000028766.11	ENSMUST00000030551.11	2522	12	0	308	0	-308	multi-exon	FALSE	canonical	3	1320	junction_11	106.491531498949	3481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGGGGGGAAGACCAGG	NA	False	NA	NA	False	NA	NA	NA	137523695	137469351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
ENSMUSG00000028766.11_137469352_137523695_2	chr4	-	2208	12	NNC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	0	-308	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	462.91114403601	2952	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGGGGGGAAGACCAGG	NA	False	NA	NA	False	NA	NA	NA	137523695	137469351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483055_137485882_137486044_137523552
ENSMUSG00000028766.11_137469493_137523695_1	chr4	-	2067	12	NNC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	0	-449	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	462.91114403601	1464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTATTTTTCTACCAAAT	NA	False	NA	NA	False	NA	NA	NA	137523695	137469492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483055_137485882_137486044_137523552
ENSMUSG00000028772.20_130202533_130209256_1	chr4	-	678	4	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	3276	6643	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	25165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTCCCGGCTGGACAGC	NA	False	NA	NA	False	NA	NA	NA	130209256	130202532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_130202644_130206083_130206257_130207746_130207849_130208964
ENSMUSG00000028772.20_130209872_130253721_1	chr4	-	1402	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	15	696	-12	200	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTATTCCTATAATCCT	NA	False	NA	-6	True	CATAAA	-34	NA	130253721	130209871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
ENSMUSG00000028773.9_130202533_130209121_1	chr4	+	543	4	FSM	ENSMUSG00000028773.9	ENSMUST00000070532.8	823	4	145	135	145	-135	multi-exon	FALSE	canonical	3	4337	junction_3	149.244765402342	2204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTGGGTTGGGATTTT	NA	False	NA	NA	False	TATAAA	-1	NA	130202532	130209121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_130202644_130206083_130206257_130207746_130207849_130208964
ENSMUSG00000028773.9_130202533_130209256_1	chr4	+	608	5	NNC	ENSMUSG00000028773.9	novel	823	4	NA	NA	145	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1966.23324849825	5103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTTGGTCCTC	NA	False	NA	31	True	AATAAA	-20	NA	130202532	130209256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_130202644_130206083_130206257_130207746_130207849_130208964_130209031_130209100
ENSMUSG00000028773.9_130202533_130209256_2	chr4	+	552	4	NNC	ENSMUSG00000028773.9	novel	823	4	NA	NA	145	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2135.19028556135	1402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTTGGTCCTC	NA	False	NA	31	True	AATAAA	-20	NA	130202532	130209256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_130202644_130206083_130206153_130207768_130207849_130208964
ENSMUSG00000028773.9_130202533_130209256_3	chr4	+	571	4	NNC	ENSMUSG00000028773.9	novel	823	4	NA	NA	145	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2135.19028556135	1538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTTGGTCCTC	NA	False	NA	31	True	AATAAA	-20	NA	130202532	130209256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_130202644_130206083_130206150_130207746_130207849_130208964
ENSMUSG00000028773.9_130202533_130209256_4	chr4	+	561	4	NNC	ENSMUSG00000028773.9	novel	823	4	NA	NA	145	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2182.45203587362	1424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTTGGTCCTC	NA	False	NA	31	True	AATAAA	-20	NA	130202532	130209256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_130202644_130206083_130206257_130207746_130207849_130209081
ENSMUSG00000028773.9_130202533_130209256_5	chr4	+	548	4	NNC	ENSMUSG00000028773.9	novel	823	4	NA	NA	145	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2182.45203587362	1071	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTTGGTCCTC	NA	False	NA	31	True	AATAAA	-20	NA	130202532	130209256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_130202644_130206083_130206257_130207746_130207849_130209094
ENSMUSG00000028776.15_130059395_130062190_1	chr4	-	1330	8	NNC	ENSMUSG00000028776.15	novel	1952	12	NA	NA	1087	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	91.2757651631716	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGTCTGGGAGTCTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	130062190	130059394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062145
ENSMUSG00000028776.15_130059512_130068595_1	chr4	-	1835	12	FSM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	0	117	0	0	multi-exon	FALSE	canonical	3	185	junction_11	29.3189922368611	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATCTCCCTAGCCTCC	NA	False	NA	NA	False	NA	NA	NA	130068595	130059511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068515
ENSMUSG00000028792.15_128887146_128905322_1	chr4	+	969	6	NNC	ENSMUSG00000028792.15	novel	1781	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	863.749593342885	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	2998	False	NA	29	True	AATAAA	-19	NA	128887145	128905322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901563_128904826
ENSMUSG00000028793.16_128974233_128978319_1	chr4	+	1041	3	ISM	ENSMUSG00000028793.16	ENSMUST00000130803.3	815	5	1469	1360	1469	0	internal_fragment	FALSE	canonical	3	160	junction_1	17.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATGTCACTGTCCTTGG	NA	False	NA	16	True	AATAAA	-19	NA	128974232	128978319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_128974343_128976539_128976672_128977520
ENSMUSG00000028797.21_129494493_129501700_1	chr4	+	796	5	FSM	ENSMUSG00000028797.21	ENSMUST00000102591.10	1437	5	20	621	0	30	multi-exon	FALSE	canonical	3	325	junction_2	181.287582310538	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACGAAGGGCAGCACTG	3196	False	NA	NA	False	NA	NA	NA	129494492	129501700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129494525_129494775_129494928_129495987_129496055_129500879_129500973_129501248
ENSMUSG00000028797.21_129494493_129501700_2	chr4	+	905	5	FSM	ENSMUSG00000028797.21	ENSMUST00000152126.8	1519	5	0	614	0	30	multi-exon	FALSE	canonical	3	284	junction_2	194.785779768442	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACGAAGGGCAGCACTG	3196	False	NA	NA	False	NA	NA	NA	129494492	129501700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129494525_129494775_129495037_129495987_129496055_129500879_129500973_129501248
ENSMUSG00000028797.21_129494493_129502321_1	chr4	+	1416	5	NNC	ENSMUSG00000028797.21	novel	1437	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	304.496613281659	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3196	False	NA	16	True	AATAAA	-16	NA	129494492	129502321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_129494529_129494780_129494928_129495987_129496055_129500879_129500973_129501248
ENSMUSG00000028797.21_129494493_129502321_2	chr4	+	1745	6	NIC	ENSMUSG00000028797.21	novel	1519	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	299.030834530488	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3196	False	NA	16	True	AATAAA	-16	NA	129494492	129502321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_129494525_129494775_129495037_129495199_129495419_129495987_129496055_129500879_129500973_129501248
ENSMUSG00000028797.21_129494493_129502321_3	chr4	+	1350	4	FSM	ENSMUSG00000028797.21	ENSMUST00000174819.8	652	4	5	-703	0	0	multi-exon	FALSE	canonical	3	97	junction_2	255.064697674923	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3196	False	NA	16	True	AATAAA	-16	NA	129494492	129502321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129494525_129494775_129494928_129500879_129500973_129501248
ENSMUSG00000028797.21_129508919_129512878_1	chr4	+	2505	6	Genic_Genomic	ENSMUSG00000028797.21	novel	1575	5	NA	NA	13116	-489	multi-exon	FALSE	non_canonical	0	0	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGCTTGCGTGCGTTTGC	NA	False	NA	NA	False	NA	NA	NA	129508918	129512878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_129509275_129509394_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
ENSMUSG00000028797.21_129509410_129512878_1	chr4	+	1261	6	Genic_Genomic	ENSMUSG00000028797.21	novel	1575	5	NA	NA	13607	-489	multi-exon	FALSE	non_canonical	0	0	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGCTTGCGTGCGTTTGC	NA	False	NA	NA	False	NA	NA	NA	129509409	129512878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_129509881_129510753_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
ENSMUSG00000028798.17_129485753_129494413_1	chr4	-	1090	11	NNC	ENSMUSG00000028798.17	novel	1123	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	440.33647361989	13553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGCAGCCTGTCTGT	6405	False	NA	0	True	AATAAA	-32	NA	129494413	129485752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489202_129490666_129490733_129492747_129492836_129494201_129494295_129494386
ENSMUSG00000028800.16_129410061_129436484_1	chr4	-	1852	14	FSM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	22	164	0	0	multi-exon	FALSE	canonical	3	1463	junction_10	202.513203601978	4692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTCTGTTTATACCTTC	8830	False	NA	NA	False	NA	NA	NA	129436484	129410060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ENSMUSG00000028800.16_129410164_129436484_1	chr4	-	1749	14	FSM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	22	267	0	-103	multi-exon	FALSE	canonical	3	1463	junction_10	202.513203601978	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTAGGAGCTCTGCTAA	8830	False	NA	NA	False	AAGAAA	-37	NA	129436484	129410163	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ENSMUSG00000028807.3_129247421_129271652_1	chr4	-	2064	5	FSM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	257	0	257	0	multi-exon	FALSE	canonical	3	128	junction_4	9.35414346693485	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTCGTGACACTTTTA	NA	False	NA	0	True	AATAAA	-24	NA	129271652	129247420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532
ENSMUSG00000028811.13_129083695_129112602_1	chr4	+	1969	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	142	798	0	146	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGGTCCCTGTAATTG	855	False	NA	13	True	AATAGA	-19	NA	129083694	129112602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ENSMUSG00000028811.13_129083695_129113029_1	chr4	+	2389	13	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	0	-371	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	455.388539845067	4633	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	855	False	NA	25	True	AATAAA	-15	NA	129083694	129113029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109025_129109213_129110470_129110613_129112223
ENSMUSG00000028811.13_129083695_129113029_2	chr4	+	2396	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	142	371	0	-371	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	4642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	855	False	NA	25	True	AATAAA	-15	NA	129083694	129113029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ENSMUSG00000028820.14_126915954_126924073_1	chr4	+	1672	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	837	956	837	-956	multi-exon	FALSE	canonical	3	697	junction_1	123.17016233199	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGATCTTCAACTTTG	NA	False	NA	9	True	AATAAA	-17	NA	126915953	126924073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
ENSMUSG00000028820.14_126921246_126930806_1	chr4	+	282	4	ISM	ENSMUSG00000028820.14	ENSMUST00000146285.8	925	10	3926	0	1008	0	3prime_fragment	FALSE	canonical	3	77	junction_1	119.510111148248	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTGTTCAAGTAGGA	NA	False	NA	18	True	AATAAA	-19	NA	126921245	126930806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_126921312_126929600_126929648_126930355_126930443_126930724
ENSMUSG00000028821.9_134658321_134664467_1	chr4	+	865	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	112	392	0	-392	multi-exon	FALSE	canonical	3	670	junction_5	39.6628149390445	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCCACATGCATATGTT	NA	False	NA	11	True	AATAAA	-17	NA	134658320	134664467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
ENSMUSG00000028822.12_134625160_134642326_1	chr4	-	1189	7	NNC	ENSMUSG00000028822.12	novel	1204	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	233.310058362972	3526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTCGTTATACCTT	NA	False	NA	-20	True	ATTAAA	-19	NA	134642326	134625159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640407_134640507_134642199
ENSMUSG00000028822.12_134625160_134642326_2	chr4	-	1261	7	FSM	ENSMUSG00000028822.12	ENSMUST00000105863.2	719	7	0	-542	0	0	multi-exon	FALSE	canonical	3	28	junction_6	233.0748568355	3579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTCGTTATACCTT	NA	False	NA	-20	True	ATTAAA	-19	NA	134642326	134625159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640573_134642199
ENSMUSG00000028822.12_134625160_134642326_3	chr4	-	1201	7	NNC	ENSMUSG00000028822.12	novel	1204	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	246.412932561043	3566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTCGTTATACCTT	NA	False	NA	-20	True	ATTAAA	-19	NA	134642326	134625159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_134625788_134628010_134628072_134630954_134631054_134632654_134632723_134636923_134637037_134640401_134640507_134642199
ENSMUSG00000028832.12_134195675_134200975_1	chr4	+	837	5	FSM	ENSMUSG00000028832.12	ENSMUST00000030636.11	1060	5	44	179	-35	0	multi-exon	FALSE	canonical	3	455	junction_1	251.409029273016	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGGCTAGTTCTGTATT	NA	False	NA	NA	False	NA	NA	NA	134195674	134200975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200642
ENSMUSG00000028832.12_134195675_134201154_1	chr4	+	866	6	NNC	ENSMUSG00000028832.12	novel	1060	5	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	420.733359742248	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTCTGTTCAGGTAGT	NA	False	NA	11	True	AATAAA	-27	NA	134195674	134201154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200642_134200726_134200875
ENSMUSG00000028836.15_134071196_134080242_1	chr4	+	1592	7	FSM	ENSMUSG00000028836.15	ENSMUST00000081094.6	2023	7	176	255	176	254	multi-exon	FALSE	canonical	3	255	junction_3	13.4587848221483	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGAGGAAGATCTGAGG	2760	False	NA	5	True	GATAAA	-17	NA	134071195	134080242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ENSMUSG00000028836.15_134071196_134081789_1	chr4	+	3139	7	FSM	ENSMUSG00000028836.15	ENSMUST00000081094.6	2023	7	176	-1292	176	1	multi-exon	FALSE	canonical	3	255	junction_3	13.4587848221483	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGAGTGTTTTGCCT	2760	False	NA	10	True	AATAAA	-15	NA	134071195	134081789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ENSMUSG00000028840.11_133971960_133972836_1	chr4	-	560	3	NNC	ENSMUSG00000028840.11	novel	1994	3	NA	NA	17	-1342	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	307	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCACACCTCCGATACTAA	7735	False	NA	-29	True	AATAAA	-15	NA	133972836	133971959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_133972235_133972335_133972399_133972614
ENSMUSG00000028840.11_133971960_133972903_1	chr4	-	634	3	FSM	ENSMUSG00000028840.11	ENSMUST00000030644.8	1994	3	0	1360	0	-1342	multi-exon	FALSE	canonical	3	614	junction_2	27	1421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCACACCTCCGATACTAA	7668	False	NA	-29	True	AATAAA	-15	NA	133972903	133971959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_133972242_133972335_133972399_133972614
ENSMUSG00000028842.16_126269471_126323334_1	chr4	-	1311	7	NIC	ENSMUSG00000028842.16	novel	625	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	7.32006375199925	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATTGTCCTTTCATAA	2379	False	NA	NA	False	ATTAAA	-18	NA	126323334	126269470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_126269734_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
ENSMUSG00000028843.9_133854724_133856065_1	chr4	-	812	2	FSM	ENSMUSG00000028843.9	ENSMUST00000136408.2	368	2	-17	-427	-15	0	multi-exon	FALSE	canonical	3	1437	junction_1	0	5325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACTGCTTGTGGTGT	9261	False	NA	-12	True	ATTAAA	-15	NA	133856065	133854723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_133855397_133855926
ENSMUSG00000028848.14_133311673_133319046_1	chr4	+	1298	5	FSM	ENSMUSG00000028848.14	ENSMUST00000105899.2	996	5	-57	-245	0	0	multi-exon	FALSE	canonical	3	9	junction_1	62.5154980784765	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTTTTTTTAGTGTGTGT	NA	False	NA	41	True	NA	NA	NA	133311672	133319046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_133312112_133313220_133313378_133315810_133315972_133317077_133317209_133318636
ENSMUSG00000028857.17_132993356_133004940_1	chr4	-	1236	5	FSM	ENSMUSG00000028857.17	ENSMUST00000139030.2	546	5	141	-831	-11	0	multi-exon	FALSE	canonical	3	79	junction_4	309.884151740614	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	False	NA	-12	True	AATAAA	-14	NA	133004940	132993355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_133004841
ENSMUSG00000028857.17_132993356_133004940_2	chr4	-	1321	6	FSM	ENSMUSG00000028857.17	ENSMUST00000105907.9	1484	6	163	0	-11	0	multi-exon	FALSE	canonical	3	666	junction_4	52.562343935559	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	False	NA	-12	True	AATAAA	-14	NA	133004940	132993355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132998273_132998359_133004841
ENSMUSG00000028857.17_132993356_133005062_1	chr4	-	1358	5	FSM	ENSMUSG00000028857.17	ENSMUST00000139030.2	546	5	19	-831	0	0	multi-exon	FALSE	canonical	3	79	junction_4	309.884151740614	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	False	NA	-12	True	AATAAA	-14	NA	133005062	132993355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_133004841
ENSMUSG00000028861.14_125940770_125949329_2	chr4	+	883	8	NNC	ENSMUSG00000028861.14	novel	937	8	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	476.751935668084	3415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATGGAAGATGGCCTT	NA	False	NA	31	True	AATAAA	-16	NA	125940769	125949329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945123_125945203_125947292_125947352_125948753_125948946_125949172
ENSMUSG00000028861.14_125940770_125949329_3	chr4	+	861	7	NNC	ENSMUSG00000028861.14	novel	937	8	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	500.101906281776	3147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATGGAAGATGGCCTT	NA	False	NA	31	True	AATAAA	-16	NA	125940769	125949329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_125941010_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
ENSMUSG00000028861.14_125940770_125949329_4	chr4	+	882	8	NNC	ENSMUSG00000028861.14	novel	937	8	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	477.357565036901	3415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATGGAAGATGGCCTT	NA	False	NA	31	True	AATAAA	-16	NA	125940769	125949329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948760_125948946_125949172
ENSMUSG00000028863.14_124978958_124997675_1	chr4	+	998	6	NIC	ENSMUSG00000028863.14	novel	872	6	NA	NA	0	379	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	120.208818312135	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCATCAACAGATTCTT	NA	False	NA	14	True	ATTAAA	-20	NA	124978957	124997675	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_124997222
ENSMUSG00000028863.14_124978958_125003507_1	chr4	+	683	6	FSM	ENSMUSG00000028863.14	ENSMUST00000055213.11	872	6	14	175	0	0	multi-exon	FALSE	canonical	3	84	junction_5	98.9605982196955	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCATTCTCTTGTTT	NA	False	NA	-10	True	NA	NA	NA	124978957	125003507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125003369
ENSMUSG00000028863.14_124978958_125003507_2	chr4	+	995	7	FSM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	31	3524	0	0	multi-exon	TRUE	canonical	3	173	junction_5	63.7427555796648	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCATTCTCTTGTTT	NA	False	NA	-10	True	NA	NA	NA	124978957	125003507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
ENSMUSG00000028863.14_124978958_125003685_1	chr4	+	1173	7	FSM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	31	3346	0	3	multi-exon	FALSE	canonical	3	173	junction_5	63.7427555796648	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCAGCTGCCTCTTTGGC	NA	False	NA	43	True	ACTAAA	-19	NA	124978957	125003685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
ENSMUSG00000028863.14_124978958_125003862_1	chr4	+	1038	6	FSM	ENSMUSG00000028863.14	ENSMUST00000055213.11	872	6	14	-180	0	180	multi-exon	FALSE	canonical	3	84	junction_5	98.9605982196955	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCATGTGCTCCTTCTA	NA	False	NA	NA	False	AATAAA	-17	NA	124978957	125003862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125003369
ENSMUSG00000028863.14_124978958_125003862_2	chr4	+	1350	7	FSM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	31	3169	0	180	multi-exon	FALSE	canonical	3	173	junction_5	63.7427555796648	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCATGTGCTCCTTCTA	NA	False	NA	NA	False	AATAAA	-17	NA	124978957	125003862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
ENSMUSG00000028869.14_124923851_124949173_1	chr4	+	2299	16	NNC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	191.173173385342	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAACTGTGTTCGCTTTCTT	NA	False	NA	28	True	ATTAAA	-22	NA	124923850	124949173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934910_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ENSMUSG00000028869.14_124923851_124949173_2	chr4	+	2298	16	NNC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	190.450926896026	1869	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAACTGTGTTCGCTTTCTT	NA	False	NA	28	True	ATTAAA	-22	NA	124923850	124949173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_124923988_124928030_124928116_124929013_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ENSMUSG00000028873.17_124812258_124830666_1	chr4	-	1576	10	NNC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_8	519.368443637957	4892	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCGGTCATCTGCATT	NA	False	NA	-10	True	AATAAA	-26	NA	124830666	124812257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824900_124830147_124830277_124830381
ENSMUSG00000028879.5_132581375_132611820_2	chr4	-	2371	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	0	563	0	-563	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTTATTTTTATGAG	6093	False	NA	-11	True	AATAAA	-13	NA	132611820	132581374	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ENSMUSG00000028879.5_132581672_132611820_1	chr4	-	2074	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	0	860	0	-860	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTTGTCTACTGCC	6093	False	NA	NA	False	AATAAA	-17	NA	132611820	132581671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ENSMUSG00000028884.15_132495687_132505794_1	chr4	+	1493	9	NNC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	0	-269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	477.074663312777	4567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCTGAAATGTTGGTT	NA	False	NA	26	True	GATAAA	-16	NA	132495686	132505794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_132495778_132495990_132496098_132497866_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ENSMUSG00000028884.15_132495687_132505794_2	chr4	+	1499	9	NNC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	0	-269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	480.70259451661	4597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCTGAAATGTTGGTT	NA	False	NA	26	True	GATAAA	-16	NA	132495686	132505794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501218_132502336_132502445_132503558_132503667_132503963_132504059_132505100
ENSMUSG00000028884.15_132495687_132505794_4	chr4	+	1488	9	NNC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	0	-269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	474.295381987849	4569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCTGAAATGTTGGTT	NA	False	NA	26	True	GATAAA	-16	NA	132495686	132505794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_132495778_132495990_132496098_132497856_132497944_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ENSMUSG00000028885.9_132465437_132484457_1	chr4	-	1083	6	NIC	ENSMUSG00000028885.9	novel	2006	8	NA	NA	106	-5160	intron_retention	FALSE	canonical	3	69	junction_3	10.1311401135312	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGGGGTCACACCGTGG	NA	False	NA	NA	False	CATAAA	-15	NA	132484457	132465436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473788_132474003_132484295
ENSMUSG00000028886.16_132366390_132449446_1	chr4	+	2497	17	FSM	ENSMUSG00000028886.16	ENSMUST00000081726.13	5160	17	33	2630	0	0	multi-exon	FALSE	canonical	3	62	junction_15	5.48542101848163	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGAAGTTCTGTCCCAG	NA	False	NA	28	True	NA	NA	NA	132366389	132449446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ENSMUSG00000028894.19_124645407_124695304_1	chr4	+	2979	18	ISM	ENSMUSG00000028894.19	ENSMUST00000094782.10	3809	24	9764	0	9736	0	3prime_fragment	FALSE	canonical	3	118	junction_11	23.4933547256022	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGTTCTCTCTTTTTTT	NA	False	NA	22	True	AATATA	-30	NA	124645406	124695304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ENSMUSG00000028896.14_132059234_132073012_1	chr4	-	2047	9	NIC	ENSMUSG00000028896.14	novel	2278	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	34	junction_7	128.195590310275	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTGTTTTTATGCGT	5485	False	NA	-14	True	AATAAA	-17	NA	132073012	132059233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132067235_132067318_132072956
ENSMUSG00000028896.14_132059234_132073012_2	chr4	-	2230	10	NNC	ENSMUSG00000028896.14	novel	2278	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	139.444134572476	1646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTGTTTTTATGCGT	5485	False	NA	-14	True	AATAAA	-17	NA	132073012	132059233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_132060314_132061417_132061566_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132072956
ENSMUSG00000028896.14_132059234_132073012_3	chr4	-	1867	8	NIC	ENSMUSG00000028896.14	novel	2278	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_6	141.225250676256	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTGTTTTTATGCGT	5485	False	NA	-14	True	AATAAA	-17	NA	132073012	132059233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132067235_132067318_132072956
ENSMUSG00000028898.16_132039074_132056800_1	chr4	-	981	8	NIC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_6	176.968693184266	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCTTCTTCAACTGTAT	2365	False	NA	0	True	AATAAA	-17	NA	132056800	132039073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132055779_132055878_132056663
ENSMUSG00000028898.16_132039074_132056800_2	chr4	-	983	8	NIC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	168.067042016705	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCTTCTTCAACTGTAT	2365	False	NA	0	True	AATAAA	-17	NA	132056800	132039073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132056663
ENSMUSG00000028899.12_132001724_132020404_2	chr4	+	1238	7	NNC	ENSMUSG00000028899.12	novel	777	7	NA	NA	0	381	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	223.982886251011	938	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAGGGTGCATAGCTGA	NA	False	NA	23	True	AATAAA	-17	NA	132001723	132020404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_132001799_132003933_132004096_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ENSMUSG00000028899.12_132001724_132020640_1	chr4	+	1474	7	NNC	ENSMUSG00000028899.12	novel	777	7	NA	NA	0	617	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	223.982886251011	1530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTGTCCATAGGACCT	NA	False	NA	26	True	AATAAA	-22	NA	132001723	132020640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_132001799_132003933_132004096_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ENSMUSG00000028901.14_131952982_131988843_1	chr4	-	1918	11	FSM	ENSMUSG00000028901.14	ENSMUST00000105965.8	4632	11	-11	2725	-11	0	multi-exon	FALSE	canonical	2	6	junction_10	24.0074988284911	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	1982	False	NA	-58	True	NA	NA	NA	131988843	131952981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131979741_131979805_131988801
ENSMUSG00000028901.14_131953713_131988843_1	chr4	-	1124	10	FSM	ENSMUSG00000028901.14	ENSMUST00000105964.2	1925	10	70	731	-11	-731	multi-exon	FALSE	canonical	3	10	junction_9	18.219511993573	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTTCAAAATGTGGTAC	1982	False	NA	NA	False	AAAAAG	-30	NA	131988843	131953712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
ENSMUSG00000028902.5_124602982_124626253_1	chr4	+	1885	18	NNC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	-5587	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	308.79832950406	3594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTATGAATTTTTTGTT	NA	False	NA	51	True	AATAAA	-38	NA	124602981	124626253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_124603030_124608551_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ENSMUSG00000028902.5_124608569_124626253_1	chr4	+	1825	17	NNC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	318.30996587446	3116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTATGAATTTTTTGTT	NA	False	NA	51	True	AATAAA	-38	NA	124608568	124626253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622037_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ENSMUSG00000028902.5_124608676_124626253_1	chr4	+	1707	17	NNC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	318.074032017312	2614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTATGAATTTTTTGTT	NA	False	NA	51	True	AATAAA	-38	NA	124608675	124626253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621872_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ENSMUSG00000028902.5_124608676_124626253_3	chr4	+	1704	17	NNC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	320.362855797922	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTATGAATTTTTTGTT	NA	False	NA	51	True	AATAAA	-38	NA	124608675	124626253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615891_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ENSMUSG00000028902.5_124608676_124626253_4	chr4	+	385	4	NNC	ENSMUSG00000028902.5	novel	788	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	628.144887744858	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTATGAATTTTTTGTT	NA	False	NA	51	True	AATAAA	-38	NA	124608675	124626253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_124608784_124609061_124609110_124609444_124609498_124626077
ENSMUSG00000028907.8_124572590_124587393_1	chr4	-	966	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	0	637	0	0	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	5382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTTGTAATCATGACT	NA	False	NA	NA	False	NA	NA	NA	124587393	124572589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ENSMUSG00000028910.13_131570804_131595097_1	chr4	+	1370	11	NIC	ENSMUSG00000028910.13	novel	1337	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	55.4697214703662	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCATGCGTGTGGAGGAA	NA	False	NA	33	True	AATAAA	-33	NA	131570803	131595097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131585212_131588071_131588175_131588487_131588544_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
ENSMUSG00000028923.15_140794658_140805653_1	chr4	-	1056	8	FSM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	15	835	0	0	multi-exon	FALSE	canonical	3	362	junction_3	45.6883855200484	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGCAAGCCCATCGCC	8500	False	NA	-99	True	NA	NA	NA	140805653	140794657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ENSMUSG00000028932.9_21991773_22008785_1	chr5	+	1425	12	ISM	ENSMUSG00000028932.9	ENSMUST00000030769.7	1785	13	1492	0	1492	0	3prime_fragment	FALSE	canonical	3	1482	junction_9	138.585355743117	6277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCTTCCAGATCTCTG	NA	False	NA	21	True	AATAAA	-17	NA	21991772	22008785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
ENSMUSG00000028932.9_21991773_22008785_2	chr5	+	1405	11	NNC	ENSMUSG00000028932.9	novel	1785	13	NA	NA	1492	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	544.605921745256	6181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCTTCCAGATCTCTG	NA	False	NA	21	True	AATAAA	-17	NA	21991772	22008785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_21991883_22000742_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
ENSMUSG00000028933.12_25897049_25910771_2	chr5	-	956	3	FSM	ENSMUSG00000028933.12	ENSMUST00000030773.12	3247	3	52	2239	0	0	multi-exon	FALSE	canonical	3	77	junction_1	2.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGGTTTGATTCTAAA	NA	False	NA	NA	False	TTTAAA	-15	NA	25910771	25897048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_25897827_25903248_25903331_25910675
ENSMUSG00000028937.15_152262591_152356183_1	chr4	+	1331	9	FSM	ENSMUSG00000028937.15	ENSMUST00000075363.10	1457	9	0	126	0	-121	multi-exon	FALSE	canonical	3	360	junction_1	55.2466062306093	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTGCACCAAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	152262590	152356183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ENSMUSG00000028937.15_152270591_152356183_1	chr4	+	1376	9	FSM	ENSMUSG00000028937.15	ENSMUST00000167926.8	1505	9	0	129	0	-121	multi-exon	FALSE	canonical	3	33	junction_1	152.008172066504	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTGCACCAAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	152270590	152356183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_152270843_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ENSMUSG00000028944.15_25068586_25113450_1	chr5	-	1351	12	ISM	ENSMUSG00000028944.15	ENSMUST00000076306.12	2838	14	87301	840	0	188	3prime_fragment	FALSE	canonical	3	39	junction_11	38.9905688956947	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACTACTTTTCATTTCA	NA	False	NA	-4	True	ATTAAA	-19	NA	25113450	25068585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320
ENSMUSG00000028945.10_25008246_25047426_1	chr5	-	1163	8	FSM	ENSMUSG00000028945.10	ENSMUST00000030787.9	1784	8	196	425	0	419	multi-exon	FALSE	canonical	3	1533	junction_1	69.8271919433531	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGAGCTACTTGGTGT	NA	False	NA	-8	True	AATAAA	-18	NA	25047426	25008245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182
ENSMUSG00000028945.10_25008246_25047622_1	chr5	-	1002	8	NNC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	0	419	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_7	560.802195110554	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGAGCTACTTGGTGT	NA	False	NA	-8	True	AATAAA	-18	NA	25047622	25008245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047539
ENSMUSG00000028945.10_25008246_25047622_2	chr5	-	1198	9	NNC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	0	419	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	545.359743655507	2064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGAGCTACTTGGTGT	NA	False	NA	-8	True	AATAAA	-18	NA	25047622	25008245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182_25047349_25047509
ENSMUSG00000028945.10_25008246_25047780_1	chr5	-	1077	8	NNC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	-158	419	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	565.331183412675	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGAGCTACTTGGTGT	NA	False	NA	-8	True	AATAAA	-18	NA	25047780	25008245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047622
ENSMUSG00000028953.11_24770343_24781725_1	chr5	-	2448	13	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	740	0	740	0	3prime_fragment	FALSE	canonical	3	1363	junction_8	89.0874648246816	2560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTGGGTCTCTGAGC	NA	False	NA	-29	True	AATAAA	-21	NA	24781725	24770342	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516
ENSMUSG00000028953.11_24773799_24782465_1	chr5	-	1250	8	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	0	3456	0	-3456	5prime_fragment	FALSE	canonical	3	1197	junction_7	125.479325884744	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGAAAACACTACAGAA	NA	False	NA	NA	False	NA	NA	NA	24782465	24773798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ENSMUSG00000028954.12_24890985_24914211_1	chr5	+	1941	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	163	1165	0	-1163	multi-exon	FALSE	canonical	3	384	junction_1	91.6660977100463	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGAATGCTTCTTTGCG	NA	False	NA	20	True	TATAAA	-16	NA	24890984	24914211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ENSMUSG00000028954.12_24890985_24914211_2	chr5	+	1928	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	455	1163	0	-1163	multi-exon	FALSE	canonical	3	299	junction_1	111.175284472544	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGAATGCTTCTTTGCG	NA	False	NA	20	True	TATAAA	-16	NA	24890984	24914211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ENSMUSG00000028954.12_24890985_24914869_1	chr5	+	2599	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	163	507	0	-505	multi-exon	FALSE	canonical	3	384	junction_1	91.6660977100463	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGCAAGTTATTTTTAA	NA	False	NA	13	True	ATTAAA	-22	NA	24890984	24914869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ENSMUSG00000028954.12_24890985_24914869_2	chr5	+	2586	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	455	505	0	-505	multi-exon	FALSE	canonical	3	299	junction_1	111.175284472544	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGCAAGTTATTTTTAA	NA	False	NA	13	True	ATTAAA	-22	NA	24890984	24914869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ENSMUSG00000028954.12_24890985_24915376_1	chr5	+	3093	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	455	-2	0	0	multi-exon	FALSE	canonical	3	299	junction_1	111.175284472544	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGTCTGACGCAGTGA	NA	False	NA	11	True	AATAAA	-20	NA	24890984	24915376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ENSMUSG00000028954.12_24890985_24915376_2	chr5	+	3106	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	163	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	91.6660977100463	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGTCTGACGCAGTGA	NA	False	NA	11	True	AATAAA	-20	NA	24890984	24915376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ENSMUSG00000028955.4_151133341_151142403_1	chr4	-	529	5	FSM	ENSMUSG00000028955.4	ENSMUST00000030797.4	2120	5	7	1584	0	1525	multi-exon	FALSE	canonical	3	150	junction_4	30.2685893295343	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTTTGTTTTTCATAT	NA	False	NA	NA	False	NA	NA	NA	151142403	151133340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_151133504_151134451_151134504_151135373_151135533_151140618_151140701_151142330
ENSMUSG00000028959.15_24646037_24650184_1	chr5	-	1708	11	NNC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_9	338.558414457535	1074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650184	24646036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24648990_24649073_24649304_24650063
ENSMUSG00000028959.15_24646037_24650184_2	chr5	-	1784	10	NNC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	390.519913025105	1191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650184	24646036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648900_24649304_24650063
ENSMUSG00000028961.16_149234448_149251129_2	chr4	-	2178	13	NNC	ENSMUSG00000028961.16	novel	2218	13	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	116.429759464189	1817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTCTTTGTTTCTTCTCC	NA	False	NA	-8	True	AATAAA	-16	NA	149251129	149234447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244586_149245291_149245406_149246085_149246152_149249506_149249687_149250463_149250540_149251043
ENSMUSG00000028961.16_149234448_149251129_3	chr4	-	2160	14	NNC	ENSMUSG00000028961.16	novel	2218	13	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	112.541379635126	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTCTTTGTTTCTTCTCC	NA	False	NA	-8	True	AATAAA	-16	NA	149251129	149234447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_149234909_149234931_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
ENSMUSG00000028964.15_150981590_150994325_1	chr4	-	825	7	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	153	junction_6	2090.71572673092	17172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994325	150981589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994264
ENSMUSG00000028964.15_150981693_150994325_1	chr4	-	747	7	FSM	ENSMUSG00000028964.15	ENSMUST00000030805.14	908	7	58	103	0	0	multi-exon	FALSE	canonical	3	5402	junction_3	199.85446093484	1886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGTATGTGAAGCAGCC	NA	False	NA	-104	True	NA	NA	NA	150994325	150981692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ENSMUSG00000028969.11_24624183_24628530_1	chr5	-	1120	12	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-2	191	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	52.4982486917657	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGATGATATGGTGGTGG	NA	False	NA	-9	True	CATAAA	-18	NA	24628530	24624182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_24624461_24624597_24624679_24624780_24624834_24625245_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
ENSMUSG00000028969.11_24624183_24628582_1	chr5	-	1281	11	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-54	191	intron_retention	FALSE	canonical	0	0	junction_3	55.0178152965019	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGATGATATGGTGGTGG	NA	False	NA	-9	True	CATAAA	-18	NA	24628582	24624182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_24624461_24624597_24624679_24624780_24624834_24625245_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627557_24627645_24627714_24627795_24627885_24628446
ENSMUSG00000028970.10_8848147_8856249_1	chr5	+	505	4	ISM	ENSMUSG00000028970.10	ENSMUST00000196580.5	690	6	-6	7402	0	-7402	5prime_fragment	FALSE	canonical	3	144	junction_1	3.74165738677394	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATGTGCAGTGTTGTGT	NA	False	NA	NA	False	AATGAA	-19	NA	8848146	8856249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007
ENSMUSG00000028970.10_8848147_8860878_1	chr5	+	747	5	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-39	55437	0	-2773	5prime_fragment	FALSE	canonical	3	110	junction_4	17.1955662890176	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGTTACCTTGGGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	8848146	8860878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557
ENSMUSG00000028970.10_8899123_8916315_1	chr5	+	1805	6	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	50937	0	-210	0	3prime_fragment	FALSE	canonical	3	175	junction_1	34.1912269449343	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	5174	False	NA	10	True	ATTAAA	-17	NA	8899122	8916315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ENSMUSG00000028970.10_8899208_8916315_1	chr5	+	1720	6	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	51022	0	-125	0	3prime_fragment	FALSE	canonical	3	175	junction_1	34.1912269449343	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	5259	False	NA	10	True	ATTAAA	-17	NA	8899207	8916315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ENSMUSG00000028970.10_8901129_8916315_1	chr5	+	1417	6	NNC	ENSMUSG00000028970.10	novel	613	4	NA	NA	-258	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	91.0173609812985	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	7180	False	NA	10	True	ATTAAA	-17	NA	8901128	8916315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_8901271_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ENSMUSG00000028973.19_24599406_24614944_1	chr5	+	2687	16	FSM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	253	-1	0	0	multi-exon	FALSE	canonical	3	156	junction_4	17.0567679626984	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGAGGCTGTAGCTTAGT	NA	False	NA	30	True	AATAAA	-20	NA	24599405	24614944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
ENSMUSG00000028973.19_24599406_24614944_2	chr5	+	2682	16	NNC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	49.9832860953428	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGAGGCTGTAGCTTAGT	NA	False	NA	30	True	AATAAA	-20	NA	24599405	24614944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611670_24611800_24612305_24612454_24613565_24613817_24614351
ENSMUSG00000028975.17_149031946_149184277_1	chr4	-	1495	11	Fusion	ENSMUSG00000086606.2_ENSMUSG00000028975.17	novel	2006	9	NA	NA	-4	3	multi-exon	FALSE	canonical	3	45	junction_1	151.923796687682	138	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCGTTGTGGACAAAAC	NA	False	NA	-1	True	AATAAA	-17	NA	149184277	149031945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_-_149032363_149033223_149033365_149046004_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149160476_149160525_149184228
ENSMUSG00000028978.13_24588497_24589325_1	chr5	+	736	2	ISM	ENSMUSG00000028978.13	ENSMUST00000030834.7	4132	26	18689	147	18689	0	3prime_fragment	FALSE	canonical	3	14	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTGTGAGTTACAATG	1345	False	NA	NA	False	CATAAA	-24	NA	24588496	24589325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_24588723_24588815
ENSMUSG00000028979.18_148683378_148688876_1	chr4	+	832	5	NNC	ENSMUSG00000028979.18	novel	794	4	NA	NA	-3633	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	12.0933866224478	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTGTGTGTCTCTTG	NA	False	NA	7	True	AATAAA	-17	NA	148683377	148688876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_148683507_148687124_148687354_148687448_148687627_148688143_148688276_148688712
ENSMUSG00000028982.10_149828933_149846947_1	chr4	-	1113	6	ISM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	11787	440	11787	-440	3prime_fragment	FALSE	canonical	3	394	junction_5	35.4705511657206	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTCGTGCTGGGCTGT	9526	False	NA	-7	True	ATTAAA	-15	NA	149846947	149828932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823
ENSMUSG00000028990.14_149569697_149581125_1	chr4	+	1606	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_1	58.2405287035881	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	False	NA	27	True	NA	NA	NA	149569696	149581125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_149570050_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ENSMUSG00000028998.7_24044650_24054354_1	chr5	-	456	4	NNC	ENSMUSG00000028998.7	novel	1125	3	NA	NA	-5195	-708	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1816.30877208573	31374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCCTTTCATACTTT	NA	False	NA	-29	True	AATAAA	-18	NA	24054354	24044649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_24044827_24046707_24046757_24048968_24049143_24054298
ENSMUSG00000028999.16_23992717_24024841_1	chr5	+	2764	15	FSM	ENSMUSG00000028999.16	ENSMUST00000030852.13	3298	15	8	526	0	-454	multi-exon	FALSE	canonical	2	56	junction_5	10.4591040315534	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAATAGTTTCTTGTCTT	NA	False	NA	NA	False	GATAAA	-37	NA	23992716	24024841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ENSMUSG00000029001.16_148237257_148244368_1	chr4	-	1535	5	FSM	ENSMUSG00000029001.16	ENSMUST00000105705.9	1034	5	-34	-467	-34	0	multi-exon	FALSE	canonical	2	6	junction_2	15.4979837398289	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCCTGCGGCTTTTGG	NA	False	NA	-3	True	AATAAA	-16	NA	148244368	148237256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148238102_148240602_148240739_148241065_148241164_148242993_148243281_148244199
ENSMUSG00000029003.12_148224954_148230156_1	chr4	+	1220	8	FSM	ENSMUSG00000029003.12	ENSMUST00000030860.9	1535	8	315	0	-227	0	multi-exon	FALSE	canonical	3	623	junction_4	29.3730405338651	2271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGAACATGTGTATCG	NA	False	NA	30	True	AATAAA	-38	NA	148224953	148230156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
ENSMUSG00000029003.12_148225181_148230156_1	chr4	+	993	8	FSM	ENSMUSG00000029003.12	ENSMUST00000030860.9	1535	8	542	0	0	0	multi-exon	FALSE	canonical	3	623	junction_4	29.3730405338651	2080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGAACATGTGTATCG	NA	False	NA	30	True	AATAAA	-38	NA	148225180	148230156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
ENSMUSG00000029004.16_23639447_23698496_1	chr5	+	2636	16	ISM	ENSMUSG00000029004.16	ENSMUST00000094962.9	7252	26	8	10737	0	-2710	5prime_fragment	FALSE	canonical	3	18	junction_10	3.53396220818629	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGAAGGTATGCGTCCT	NA	False	NA	NA	False	NA	NA	NA	23639446	23698496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344_23690610_23691299_23691399_23697265_23697431_23698196
ENSMUSG00000029007.9_148164371_148172488_1	chr4	-	1143	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	0	2853	0	603	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	5710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTGTCTTGGTATGAT	NA	False	NA	-18	True	NA	NA	NA	148172488	148164370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
ENSMUSG00000029007.9_148164431_148172521_1	chr4	-	1116	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	-33	2913	-33	543	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	5578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGGTTCTGTGGCTGC	NA	False	NA	-78	True	ATTAAA	-3	NA	148172521	148164430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
ENSMUSG00000029007.9_148164730_148172488_1	chr4	-	784	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	0	3212	0	244	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	3150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGAGCTGTGGTTGGTTT	NA	False	NA	-6	True	NA	NA	NA	148172488	148164729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
ENSMUSG00000029009.18_148123616_148140667_1	chr4	+	2851	12	NIC	ENSMUSG00000029009.18	novel	847	4	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	21.8151513046846	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGGCTTGCTCTTGGCCT	NA	False	NA	22	True	AAGAAA	-36	NA	148123615	148140667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_148123867_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ENSMUSG00000029012.12_22692153_22755373_1	chr5	-	1437	14	FSM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	0	666	0	-666	multi-exon	FALSE	canonical	3	527	junction_10	41.6678895284064	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGACACTGTGACAATG	NA	False	NA	NA	False	AATAAA	-40	NA	22755373	22692152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ENSMUSG00000029017.14_21942139_21962146_1	chr5	+	1599	13	NNC	ENSMUSG00000029017.14	novel	1615	13	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	108.274599463073	2236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCGTTAGTCTGTTAT	NA	False	NA	12	True	AATAAA	-14	NA	21942138	21962146	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_21942275_21943866_21944008_21945037_21945125_21945494_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
ENSMUSG00000029017.14_21942139_21962146_2	chr5	+	1608	13	NNC	ENSMUSG00000029017.14	novel	1615	13	NA	NA	0	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	140.121648537579	2227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCGTTAGTCTGTTAT	NA	False	NA	12	True	AATAAA	-14	NA	21942138	21962146	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_21942275_21943866_21944001_21945037_21945129_21945482_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
ENSMUSG00000029019.9_148070357_148071662_1	chr4	+	669	3	FSM	ENSMUSG00000029019.9	ENSMUST00000103231.5	781	3	112	0	112	0	multi-exon	FALSE	canonical	3	7	junction_1	1	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTCCGTGAGTTTCAA	NA	False	NA	NA	False	AATAAA	-30	NA	148070356	148071662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_148070559_148070752_148070976_148071418
ENSMUSG00000029022.19_147945243_147952940_1	chr4	-	1569	10	FSM	ENSMUSG00000029022.19	ENSMUST00000030886.15	1813	10	236	8	0	0	multi-exon	FALSE	canonical	3	210	junction_4	26.1538657058192	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCCATGTAAGCCTCTC	NA	False	NA	-7	True	AATAAA	-21	NA	147952940	147945242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ENSMUSG00000029022.19_147945243_147952940_2	chr4	-	1497	10	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	73.7735942588982	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCCATGTAAGCCTCTC	NA	False	NA	-7	True	AATAAA	-21	NA	147952940	147945242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_147945471_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ENSMUSG00000029022.19_147945243_147953001_1	chr4	-	1630	10	NNC	ENSMUSG00000029022.19	novel	1813	10	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	78.4276028505837	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCCATGTAAGCCTCTC	NA	False	NA	-7	True	AATAAA	-21	NA	147953001	147945242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_147945543_147945810_147945949_147946702_147946794_147946888_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ENSMUSG00000029034.10_155954024_155973326_1	chr4	+	2113	17	FSM	ENSMUSG00000029034.10	ENSMUST00000030901.9	2368	17	21	234	0	136	multi-exon	FALSE	canonical	3	774	junction_2	75.0722308430354	1464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTCCTACTCTC	9981	False	NA	32	True	AATAAA	-20	NA	155954023	155973326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ENSMUSG00000029034.10_155954024_155973326_2	chr4	+	1860	16	NNC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	0	136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	247.894457828775	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTCCTACTCTC	9981	False	NA	32	True	AATAAA	-20	NA	155954023	155973326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971941_155972363_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ENSMUSG00000029034.10_155954024_155973326_3	chr4	+	2095	16	NNC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	0	136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	248.238111497812	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTCCTACTCTC	9981	False	NA	32	True	AATAAA	-20	NA	155954023	155973326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969671_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ENSMUSG00000029034.10_155973319_155976183_1	chr4	+	1650	8	NNC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	739	2623	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCACGTGGCCCGCGGTCG	NA	False	NA	NA	False	NA	NA	NA	155973318	155976183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_155973626_155973890_155974054_155974125_155974643_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
ENSMUSG00000029036.19_155825098_155845385_1	chr4	-	2248	16	FSM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	165	0	0	0	multi-exon	FALSE	canonical	3	684	junction_5	53.203759265676	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	False	NA	-9	True	AATAAA	-19	NA	155845385	155825097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ENSMUSG00000029038.10_155789581_155818336_1	chr4	+	1142	5	NNC	ENSMUSG00000029038.10	novel	1472	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	746.318757301463	5033	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGAATTGCCACAAAAT	NA	False	NA	117	True	AATAAA	-33	NA	155789580	155818336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817935
ENSMUSG00000029038.10_155789581_155818336_2	chr4	+	1148	5	FSM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	324	0	0	0	multi-exon	FALSE	canonical	3	1510	junction_4	100.903419169025	6304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGAATTGCCACAAAAT	NA	False	NA	117	True	AATAAA	-33	NA	155789580	155818336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
ENSMUSG00000029047.14_155151516_155156314_1	chr4	+	1069	6	FSM	ENSMUSG00000029047.14	ENSMUST00000103180.4	1688	6	43	576	0	-324	multi-exon	FALSE	canonical	3	86	junction_5	7.62627038597505	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTCACATAAGCTACT	NA	False	NA	NA	False	TATAAA	-15	NA	155151515	155156314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155151632_155152279_155152361_155153119_155153527_155154843_155155020_155155097_155155234_155156161
ENSMUSG00000029048.4_155158840_155170828_2	chr4	-	1036	7	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	0	-273	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	583.385450052822	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGAGACTATTTTGAC	NA	False	NA	-33	True	TATAAA	-18	NA	155170828	155158839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_155159201_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ENSMUSG00000029048.4_155158840_155170828_4	chr4	-	1315	7	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	0	-273	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_6	582.22561491802	2125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGAGACTATTTTGAC	NA	False	NA	-33	True	TATAAA	-18	NA	155170828	155158839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167206_155170661
ENSMUSG00000029048.4_155159222_155170828_2	chr4	-	933	7	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	0	-655	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_6	582.22561491802	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTGATTTCTTTTTCA	NA	False	NA	0	True	AAGAAA	-18	NA	155170828	155159221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167206_155170661
ENSMUSG00000029048.4_155159222_155170828_3	chr4	-	1125	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	0	-655	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_6	652.166655801088	1134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTGATTTCTTTTTCA	NA	False	NA	0	True	AAGAAA	-18	NA	155170828	155159221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167588_155167775_155170661
ENSMUSG00000029048.4_155159308_155170828_1	chr4	-	845	7	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	0	-741	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_2	577.796580890618	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTTGAATTTTCTTTTT	NA	False	NA	-20	True	CATAAA	-15	NA	155170828	155159307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_155159486_155160045_155160174_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ENSMUSG00000029048.4_155159308_155170828_3	chr4	-	958	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	0	-741	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_6	682.550349492136	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTTGAATTTTCTTTTT	NA	False	NA	-20	True	CATAAA	-15	NA	155170828	155159307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167588_155167694_155170661
ENSMUSG00000029048.4_155159308_155170839_2	chr4	-	858	7	NNC	ENSMUSG00000029048.4	novel	1596	7	NA	NA	0	-741	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_6	582.22561491802	785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTTGAATTTTCTTTTT	NA	False	NA	-20	True	CATAAA	-15	NA	155170839	155159307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167206_155170661
ENSMUSG00000029053.17_155439072_155445797_1	chr4	-	491	4	ISM	ENSMUSG00000029053.17	ENSMUST00000030922.15	2641	18	21	92894	0	1519	5prime_fragment	FALSE	canonical	3	200	junction_1	19.2584757675391	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATATGAGTGTTTTGCCT	NA	False	NA	-3	True	ATTAAA	-23	NA	155445797	155439071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_155439162_155440883_155440974_155441937_155442060_155445608
ENSMUSG00000029061.3_155735112_155737664_1	chr4	-	1257	8	FSM	ENSMUSG00000029061.3	ENSMUST00000030937.2	1434	8	177	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	2.50713268211203	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTTGTTTCCTGGG	NA	False	NA	NA	False	GATAAA	-16	NA	155737664	155735111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_155735341_155735463_155735591_155735695_155735807_155735887_155736053_155736441_155736610_155736678_155736819_155736905_155737043_155737484
ENSMUSG00000029062.15_155709340_155734395_1	chr4	+	2628	21	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	115.97994438695	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	3976	False	NA	23	True	ATTAAA	-28	NA	155709339	155734395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_155709399_155709987_155710112_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ENSMUSG00000029062.15_155709340_155734395_2	chr4	+	2504	20	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	123.771570491975	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	3976	False	NA	23	True	ATTAAA	-28	NA	155709339	155734395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_155709399_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ENSMUSG00000029063.17_155648299_155674319_1	chr4	+	1871	12	FSM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	142	1139	0	242	multi-exon	FALSE	canonical	3	675	junction_7	32.1412173266612	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTTTAACTGCAGTGC	9714	False	NA	16	True	AATAAA	-16	NA	155648298	155674319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ENSMUSG00000029063.17_155648299_155675454_1	chr4	+	3006	12	FSM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	142	4	0	0	multi-exon	FALSE	canonical	3	675	junction_7	32.1412173266612	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9714	False	NA	34	True	AATAAA	-20	NA	155648298	155675454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ENSMUSG00000029063.17_155648299_155675454_2	chr4	+	1740	12	NNC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_11	206.229111138539	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9714	False	NA	34	True	AATAAA	-20	NA	155648298	155675454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155675050
ENSMUSG00000029063.17_155648299_155675454_3	chr4	+	2801	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	208.120662116956	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9714	False	NA	34	True	AATAAA	-20	NA	155648298	155675454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_155648437_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ENSMUSG00000029064.16_155600086_155642275_1	chr4	+	1474	11	ISM	ENSMUSG00000029064.16	ENSMUST00000165335.8	3143	12	24268	1451	-6833	165	3prime_fragment	FALSE	canonical	3	731	junction_10	1047.24471352211	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGTGTGATTGTGAGA	NA	False	NA	10	True	AATAAA	-20	NA	155600085	155642275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ENSMUSG00000029064.16_155641665_155642275_1	chr4	+	427	2	ISM	ENSMUSG00000029064.16	ENSMUST00000176308.2	812	4	3984	-165	3984	165	3prime_fragment	FALSE	canonical	3	3030	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGTGTGATTGTGAGA	3080	False	NA	10	True	AATAAA	-20	NA	155641664	155642275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_155641744_155641927
ENSMUSG00000029064.16_155641665_155643726_1	chr4	+	1878	2	ISM	ENSMUSG00000029064.16	ENSMUST00000176308.2	812	4	3984	-1616	3984	0	3prime_fragment	FALSE	canonical	3	3030	junction_1	0	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	3080	False	NA	27	True	AATAAA	-19	NA	155641664	155643726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_155641744_155641927
ENSMUSG00000029066.13_155887335_155893288_1	chr4	+	1130	5	NIC	ENSMUSG00000029066.13	novel	764	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	558.135064298956	7879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTATTTCCTGGC	NA	False	NA	22	True	AATAAA	-18	NA	155887334	155893288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_155887553_155887829_155888200_155888289_155888401_155891364_155891443_155892935
ENSMUSG00000029066.13_155888107_155893288_1	chr4	+	629	4	NNC	ENSMUSG00000029066.13	novel	764	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	645.346418600119	6632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTATTTCCTGGC	NA	False	NA	22	True	AATAAA	-18	NA	155888106	155893288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_155888200_155888289_155888401_155891364_155891443_155892941
ENSMUSG00000029066.13_155888107_155893288_2	chr4	+	635	4	FSM	ENSMUSG00000029066.13	ENSMUST00000030942.13	764	4	129	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_3	66.873013989202	7380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTATTTCCTGGC	NA	False	NA	22	True	AATAAA	-18	NA	155888106	155893288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155888200_155888289_155888401_155891364_155891443_155892935
ENSMUSG00000029068.17_155896958_155908802_1	chr4	+	2232	11	FSM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	12	198	0	42	multi-exon	FALSE	canonical	3	294	junction_8	247.410205933385	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTATGTAAGACTTTGT	4637	False	NA	10	True	AATAAA	-15	NA	155896957	155908802	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ENSMUSG00000029070.10_155925865_155928551_1	chr4	+	1757	7	ISM	ENSMUSG00000029070.10	ENSMUST00000030947.4	2203	10	1682	-6	-896	6	3prime_fragment	FALSE	canonical	3	23	junction_2	4.10960933531265	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGACCTGCTGCTCTC	NA	False	NA	18	True	AATAAA	-19	NA	155925864	155928551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
ENSMUSG00000029073.10_155949753_155953897_1	chr4	-	2089	3	FSM	ENSMUSG00000029073.10	ENSMUST00000030950.8	2662	3	0	573	0	0	multi-exon	FALSE	canonical	3	76	junction_1	2.5	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATACCTACATGATTG	NA	False	NA	-43	True	NA	NA	NA	155953897	155949752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_155951343_155951569_155951795_155953623
ENSMUSG00000029076.15_156077627_156094667_1	chr4	+	1512	7	NNC	ENSMUSG00000029076.15	novel	1670	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	273.814414035005	2101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTCTCCAGCATGTG	NA	False	NA	28	True	ATTAAA	-19	NA	156077626	156094667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_156077792_156080645_156080976_156083854_156083986_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ENSMUSG00000029076.15_156077627_156094667_2	chr4	+	1517	7	NNC	ENSMUSG00000029076.15	novel	1670	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	271.054115138164	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTCTCCAGCATGTG	NA	False	NA	28	True	ATTAAA	-19	NA	156077626	156094667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_156077792_156080645_156080980_156083859_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ENSMUSG00000029076.15_156077627_156094667_3	chr4	+	1513	7	NNC	ENSMUSG00000029076.15	novel	1670	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	272.346847889884	1315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTCTCCAGCATGTG	NA	False	NA	28	True	ATTAAA	-19	NA	156077626	156094667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093248_156093403_156093600_156093777_156094230
ENSMUSG00000029076.15_156077627_156094667_4	chr4	+	1518	7	FSM	ENSMUSG00000029076.15	ENSMUST00000050078.13	5177	7	259	3400	0	0	multi-exon	FALSE	canonical	3	674	junction_3	38.3521692853076	2327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTCTCCAGCATGTG	NA	False	NA	28	True	ATTAAA	-19	NA	156077626	156094667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ENSMUSG00000029084.6_44026202_44067877_1	chr5	+	1123	8	FSM	ENSMUSG00000029084.6	ENSMUST00000030964.6	3270	8	307	1840	0	-1840	multi-exon	FALSE	canonical	3	162	junction_4	17.0353773551587	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGTTATATTAGTCTA	NA	False	NA	NA	False	CATAAA	-16	NA	44026201	44067877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44067621
ENSMUSG00000029084.6_44026202_44069520_1	chr5	+	2766	8	FSM	ENSMUSG00000029084.6	ENSMUST00000030964.6	3270	8	307	197	0	-197	multi-exon	FALSE	canonical	3	162	junction_4	17.0353773551587	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAAAGTATTTGCTTGGT	NA	False	NA	10	True	AATAAA	-15	NA	44026201	44069520	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44067621
ENSMUSG00000029103.17_35250413_35263043_1	chr5	-	1346	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	67	1568	-3	0	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	2263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCACAACAGTTTATATTG	NA	False	NA	-55	True	NA	NA	NA	35263043	35250412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ENSMUSG00000029106.15_34731207_34782706_1	chr5	+	1847	14	NIC	ENSMUSG00000029106.15	novel	3761	15	NA	NA	0	43	combination_of_known_junctions	FALSE	canonical	3	50	junction_12	169.166666180857	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAACACGCTGACAGACCG	NA	False	NA	NA	False	NA	NA	NA	34731206	34782706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34778175_34778263_34782622
ENSMUSG00000029110.14_34493761_34508833_1	chr5	+	958	7	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	962	combination_of_known_splicesites	FALSE	canonical	3	1293	junction_4	355.934919144872	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGATGTAAACTGGTCT	NA	False	NA	NA	False	AAAAAG	-16	NA	34493760	34508833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34507255_34507416_34508133_34508183_34508574
ENSMUSG00000029110.14_34493761_34510780_2	chr5	+	2848	7	NIC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	314	junction_1	732.601623591491	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493760	34510780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_34493829_34499865_34500024_34504118_34504246_34506007_34506088_34507255_34507416_34508133_34508183_34508574
ENSMUSG00000029110.14_34493761_34510780_3	chr5	+	1099	2	NNC	ENSMUSG00000029110.14	novel	371	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493760	34510780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_34493886_34509806
ENSMUSG00000029110.14_34493761_34510780_4	chr5	+	2905	7	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	1293	junction_4	355.934919144872	3163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493760	34510780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34507255_34507416_34508133_34508183_34508574
ENSMUSG00000029110.14_34493790_34509782_1	chr5	+	1878	7	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	-986	combination_of_known_splicesites	FALSE	canonical	3	1293	junction_4	355.934919144872	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATAGATAGGTATTTCC	NA	False	NA	NA	False	NA	NA	NA	34493789	34509782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34507255_34507416_34508133_34508183_34508574
ENSMUSG00000029110.14_34493790_34510780_1	chr5	+	2883	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1029.90511968606	2489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493789	34510780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_34493886_34499865_34500019_34504118_34504246_34506007_34506100_34507255_34507416_34508133_34508183_34508574
ENSMUSG00000029111.8_34055260_34093656_1	chr5	-	2479	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	101	0	-62	0	multi-exon	FALSE	canonical	3	561	junction_5	32.3241395863834	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTCCACTTTAAATGCT	NA	False	NA	0	True	AATAAA	-29	NA	34093656	34055259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ENSMUSG00000029111.8_34055519_34093594_1	chr5	-	1786	9	NIC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	0	-259	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	203.434725403506	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACAGAGCTGTGTTTCA	NA	False	NA	-6	True	ATTAAA	-21	NA	34093594	34055518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_34056254_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ENSMUSG00000029111.8_34055519_34093594_2	chr5	-	2158	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	163	259	0	-259	multi-exon	FALSE	canonical	3	561	junction_5	32.3241395863834	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACAGAGCTGTGTTTCA	NA	False	NA	-6	True	ATTAAA	-21	NA	34093594	34055518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ENSMUSG00000029111.8_34055519_34093656_1	chr5	-	2285	12	NNC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	-62	-259	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_11	216.940407706512	1127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACAGAGCTGTGTTTCA	NA	False	NA	-6	True	ATTAAA	-21	NA	34093656	34055518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34085642_34085708_34093369
ENSMUSG00000029111.8_34055762_34093656_1	chr5	-	1977	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	101	502	-62	-502	multi-exon	FALSE	canonical	3	561	junction_5	32.3241395863834	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGGCTGAGAGGGCTTT	NA	False	NA	NA	False	TTTAAA	-13	NA	34093656	34055761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ENSMUSG00000029119.10_36964265_36972020_1	chr5	-	1558	8	ISM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	15977	0	-1713	0	3prime_fragment	FALSE	canonical	3	157	junction_7	33.0448056988306	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCATGTTCAAGCCAGA	NA	False	NA	-13	True	AATAAA	-21	NA	36972020	36964264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672
ENSMUSG00000029125.15_38295002_38316820_1	chr5	+	1684	5	NIC	ENSMUSG00000029125.15	novel	3002	11	NA	NA	3263	21711	intron_retention	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCCGCGGCCGGGGGATC	NA	False	NA	NA	False	NA	NA	NA	38295001	38316820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_38296217_38302052_38302164_38312951_38313069_38316220_38316376_38316734
ENSMUSG00000029128.13_41782319_41865507_1	chr5	-	1556	6	NIC	ENSMUSG00000029128.13	novel	1635	7	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_4	194.631549343882	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGGGATTTTCATT	NA	False	NA	-4	True	AATAAA	-14	NA	41865507	41782318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_41783206_41790515_41790594_41793148_41793253_41845063_41845194_41860780_41860878_41865247
ENSMUSG00000029130.13_29400991_29430479_1	chr5	+	1469	9	NIC	ENSMUSG00000029130.13	novel	1565	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	11.1242977306435	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTTAGTTACTTAAAAT	NA	False	NA	48	True	ATTAAA	-19	NA	29400990	29430479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_29401083_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411171_29411297_29411693_29411803_29429114_29429283_29430040
ENSMUSG00000029131.15_29940987_29991373_1	chr5	+	2514	10	FSM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	301	103	0	-103	multi-exon	FALSE	canonical	3	618	junction_9	548.115559591832	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGCTCTCTTGTGGTCA	4595	False	NA	4	True	AATAAA	-17	NA	29940986	29991373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127_29986449_29990028
ENSMUSG00000029145.13_31344912_31350380_1	chr5	-	1766	13	FSM	ENSMUSG00000029145.13	ENSMUST00000166769.8	1878	13	103	9	-22	0	multi-exon	FALSE	canonical	3	32	junction_12	174.191864205983	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350380	31344911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31350115_31350336
ENSMUSG00000029145.13_31344912_31350380_2	chr5	-	1621	13	FSM	ENSMUSG00000029145.13	ENSMUST00000077693.10	2025	13	394	10	-22	0	multi-exon	FALSE	canonical	3	556	junction_3	56.1372326436643	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350380	31344911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350336
ENSMUSG00000029145.13_31350638_31356244_1	chr5	-	1951	15	NIC	ENSMUSG00000029145.13	novel	2025	13	NA	NA	-5470	-1576	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGAGGTGGGAAGGCTGT	NA	False	NA	NA	False	NA	NA	NA	31356244	31350637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ENSMUSG00000029149.15_31409060_31410541_1	chr5	+	1085	5	NIC	ENSMUSG00000029149.15	novel	1027	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	89	junction_4	5.61248608016091	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTGATTACAGTT	NA	False	NA	4	True	AATAAA	-16	NA	31409059	31410541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_31409448_31409535_31409596_31409708_31410134_31410238_31410347_31410437
ENSMUSG00000029152.14_73450150_73470943_1	chr5	+	1084	10	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	0	-314	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	326.119874953224	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGTTTGTGTAATTTAA	NA	False	NA	NA	False	CATAAA	-17	NA	73450149	73470943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_73450320_73451308_73451354_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ENSMUSG00000029152.14_73450150_73470943_2	chr5	+	1033	9	NNC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	0	-314	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	317.86858526756	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGTTTGTGTAATTTAA	NA	False	NA	NA	False	CATAAA	-17	NA	73450149	73470943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470791
ENSMUSG00000029152.14_73450150_73471284_1	chr5	+	1374	9	NNC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	317.86858526756	3692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	15	True	AATAAA	-16	NA	73450149	73471284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470791
ENSMUSG00000029152.14_73450150_73471284_2	chr5	+	1356	9	NNC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_7	313.312718182649	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	15	True	AATAAA	-16	NA	73450149	73471284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464073_73467616_73467770_73470785
ENSMUSG00000029152.14_73450150_73471284_3	chr5	+	1425	10	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	326.119874953224	3023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	15	True	AATAAA	-16	NA	73450149	73471284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_73450320_73451308_73451354_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ENSMUSG00000029152.14_73450150_73471284_4	chr5	+	1374	9	NNC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	310.505937946442	3224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	15	True	AATAAA	-16	NA	73450149	73471284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_73450320_73451627_73451691_73452274_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ENSMUSG00000029152.14_73450150_73471284_5	chr5	+	1317	8	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	328.349490261675	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	15	True	AATAAA	-16	NA	73450149	73471284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_73450320_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ENSMUSG00000029152.14_73450150_73471284_6	chr5	+	1372	9	NNC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	317.684960888928	2301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	15	True	AATAAA	-16	NA	73450149	73471284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467624_73467770_73470785
ENSMUSG00000029152.14_73450150_73471412_1	chr5	+	1553	10	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	326.119874953224	4241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTCTTTTTTTTAAAG	NA	False	NA	14	True	AATACA	-7	NA	73450149	73471412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_73450320_73451308_73451354_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ENSMUSG00000029152.14_73450184_73462227_1	chr5	+	718	6	ISM	ENSMUSG00000029152.14	ENSMUST00000166823.5	3354	7	48	4481	0	-275	5prime_fragment	FALSE	canonical	3	746	junction_1	124.674616502318	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACTGCATTCTGGATTT	NA	False	NA	NA	False	AATAAA	-28	NA	73450183	73462227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891
ENSMUSG00000029153.12_73479556_73495938_1	chr5	-	2143	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	397	14	-37	0	multi-exon	FALSE	canonical	3	44	junction_6	41.8107508768844	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCAGAGCCAATACGCT	NA	False	NA	-15	True	AATAAA	-21	NA	73495938	73479555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
ENSMUSG00000029153.12_73481009_73495938_1	chr5	-	690	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	397	1467	-37	-320	multi-exon	FALSE	canonical	3	44	junction_6	41.8107508768844	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTAATTCTCTCACCCCT	NA	False	NA	0	True	AATATA	-19	NA	73495938	73481008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
ENSMUSG00000029156.12_73792579_73805133_1	chr5	-	1299	6	FSM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	0	2487	0	-2487	multi-exon	FALSE	canonical	3	39	junction_5	18.2756668824971	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTTTTTAACATTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	73805133	73792578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73805017
ENSMUSG00000029169.12_52307545_52347719_1	chr5	-	2873	14	FSM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	137	0	0	0	multi-exon	FALSE	canonical	3	749	junction_10	48.0023421519305	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCTGTATCTTTTATT	NA	False	NA	2	True	AATAAA	-27	NA	52347719	52307544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ENSMUSG00000029169.12_52307545_52347856_1	chr5	-	3002	14	FSM	ENSMUSG00000029169.12	ENSMUST00000200186.5	2375	14	-137	-490	0	0	multi-exon	FALSE	canonical	3	57	junction_4	209.215072940651	1670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCTGTATCTTTTATT	NA	False	NA	2	True	AATAAA	-27	NA	52347856	52307544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314912_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ENSMUSG00000029173.13_52801064_52827050_1	chr5	-	1617	11	FSM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	0	3635	0	-2546	multi-exon	FALSE	canonical	3	65	junction_1	10.2493902257647	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTGGTCTGAGGGTGAT	NA	False	NA	NA	False	NA	NA	NA	52827050	52801063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
ENSMUSG00000029175.18_30805297_30815535_1	chr5	+	1530	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	20	1538	0	0	multi-exon	FALSE	canonical	3	97	junction_4	8.49470423263812	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAAGTCGGTGAACAGG	6698	False	NA	NA	False	NA	NA	NA	30805296	30815535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
ENSMUSG00000029175.18_30805297_30815960_1	chr5	+	1955	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	20	1113	0	372	multi-exon	FALSE	canonical	3	97	junction_4	8.49470423263812	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCCTTGATGTTTTGAC	6698	False	NA	9	True	NA	NA	NA	30805296	30815960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
ENSMUSG00000029176.14_52991468_53024076_1	chr5	+	2677	28	FSM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	114	1063	0	0	multi-exon	FALSE	canonical	3	314	junction_6	48.5716418249863	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCATACTCTGTTCCA	NA	False	NA	13	True	AATAAA	-13	NA	52991467	53024076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ENSMUSG00000029176.14_52991468_53024076_2	chr5	+	2678	27	NNC	ENSMUSG00000029176.14	novel	2758	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	92.2988216891586	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCATACTCTGTTCCA	NA	False	NA	13	True	AATAAA	-13	NA	52991467	53024076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999337_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ENSMUSG00000029177.10_30824279_30831753_1	chr5	+	882	5	NNC	ENSMUSG00000029177.10	novel	993	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	702.14292526522	2816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGGCAGTCCCGCCATA	9224	False	NA	40	True	AATAAA	-24	NA	30824278	30831753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_30824458_30829807_30829915_30830330_30830404_30830636_30830788_30831381
ENSMUSG00000029177.10_30824279_30832174_1	chr5	+	1308	5	FSM	ENSMUSG00000029177.10	ENSMUST00000144742.6	1466	5	158	0	0	0	multi-exon	FALSE	canonical	3	1270	junction_1	201.219407612685	3110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGTAAAGTTACTGTAA	9224	False	NA	NA	False	AATGAA	-5	NA	30824278	30832174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ENSMUSG00000029177.10_30824279_30832174_2	chr5	+	1445	6	FSM	ENSMUSG00000029177.10	ENSMUST00000133316.8	1031	6	38	-452	0	0	multi-exon	FALSE	canonical	3	531	junction_2	579.285905231605	4101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGTAAAGTTACTGTAA	9224	False	NA	NA	False	AATGAA	-5	NA	30824278	30832174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_30824458_30827035_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ENSMUSG00000029177.10_30829017_30831730_1	chr5	+	1476	4	FSM	ENSMUSG00000029177.10	ENSMUST00000134372.2	1010	4	-282	-184	-282	0	multi-exon	FALSE	canonical	3	1620	junction_2	71.7263317524789	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTTGAATCTGTTGTATG	NA	False	NA	17	True	AATAAA	-1	NA	30829016	30831730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_30829915_30830325_30830404_30830636_30830788_30831381
ENSMUSG00000029178.15_64955290_64980452_1	chr5	+	895	4	NNC	ENSMUSG00000029178.15	novel	4016	3	NA	NA	-5441	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	319.679005670793	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGCTGTGGATGGC	NA	False	NA	18	True	AATAAA	-18	NA	64955289	64980452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_64955374_64974077_64974174_64979216_64979701_64980221
ENSMUSG00000029178.15_64969727_64980452_1	chr5	+	930	4	ISM	ENSMUSG00000029178.15	ENSMUST00000166409.6	1562	6	45	6373	0	0	5prime_fragment	FALSE	non_canonical	0	0	junction_1	332.404372213524	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGCTGTGGATGGC	8291	False	NA	18	True	AATAAA	-18	NA	64969726	64980452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_64969847_64974078_64974174_64979216_64979701_64980221
ENSMUSG00000029190.20_36828743_36853307_1	chr5	-	1289	3	NNC	ENSMUSG00000029190.20	novel	2014	2	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	47	junction_1	14.5	55	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTGTATTATGTTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	36853307	36828742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_36829428_36830091_36830587_36853198
ENSMUSG00000029195.11_65529226_65541350_1	chr5	+	2690	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23569	0	23475	0	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTCTTAGACTTCG	NA	False	NA	24	True	AAAAAG	-6	NA	65529225	65541350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
ENSMUSG00000029195.11_65529398_65541350_1	chr5	+	2518	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23741	0	23647	0	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTCTTAGACTTCG	NA	False	NA	24	True	AAAAAG	-6	NA	65529397	65541350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
ENSMUSG00000029195.11_65529728_65541350_1	chr5	+	2188	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	24071	0	23977	0	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTCTTAGACTTCG	NA	False	NA	24	True	AAAAAG	-6	NA	65529727	65541350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
ENSMUSG00000029198.4_36622528_36629041_1	chr5	+	959	4	FSM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	186	2383	186	-2383	multi-exon	FALSE	canonical	3	2567	junction_1	75.3126815350509	9913	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTGCACAGTCTACC	NA	False	NA	15	True	AATAAA	-16	NA	36622527	36629041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_36622600_36626781_36626945_36627945_36628028_36628399
ENSMUSG00000029199.12_65548887_65566550_1	chr5	+	1615	11	NNC	ENSMUSG00000029199.12	novel	1668	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	111.991963997423	1493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCGTGTGTGTATGTGT	6933	False	NA	48	True	AAAAAG	-11	NA	65548886	65566550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_65549017_65549562_65549733_65551289_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ENSMUSG00000029199.12_65548887_65566550_2	chr5	+	1506	11	FSM	ENSMUSG00000029199.12	ENSMUST00000031101.10	2996	11	4	1486	0	0	multi-exon	FALSE	canonical	3	30	junction_1	106.686643962588	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCGTGTGTGTATGTGT	6933	False	NA	48	True	AAAAAG	-11	NA	65548886	65566550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_65549017_65549677_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ENSMUSG00000029201.15_65570564_65593071_1	chr5	-	2329	12	FSM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	221	0	221	0	multi-exon	FALSE	canonical	3	385	junction_10	43.2746370854342	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTCAATTTACGTATG	NA	False	NA	-13	True	AATAAA	-22	NA	65593071	65570563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
ENSMUSG00000029201.15_65570726_65593071_1	chr5	-	2167	12	FSM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	221	162	221	-159	multi-exon	FALSE	canonical	3	385	junction_10	43.2746370854342	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATGGTCTATTTCATTT	NA	False	NA	NA	False	AATATA	-20	NA	65593071	65570725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
ENSMUSG00000029202.13_65767463_65863982_1	chr5	-	4254	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8366	-2350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.114228012404	350	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACGAAGCTCACTTCA	NA	False	NA	NA	False	NA	NA	NA	65863982	65767462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
ENSMUSG00000029203.17_65694634_65752488_1	chr5	+	904	7	FSM	ENSMUSG00000029203.17	ENSMUST00000201292.4	1529	7	15	610	0	0	multi-exon	FALSE	canonical	0	0	junction_2	633.60961079271	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATACTTTTAATTTT	NA	False	NA	20	True	AATAAA	-31	NA	65694633	65752488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_65694802_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUSG00000029203.17_65694634_65752488_2	chr5	+	898	6	FSM	ENSMUSG00000029203.17	ENSMUST00000202679.4	4682	6	0	3784	0	0	multi-exon	FALSE	canonical	3	526	junction_1	338.408628731597	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATACTTTTAATTTT	NA	False	NA	20	True	AATAAA	-31	NA	65694633	65752488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_65694890_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUSG00000029203.17_65694634_65752488_3	chr5	+	992	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	58	3843	0	0	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	1642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATACTTTTAATTTT	NA	False	NA	20	True	AATAAA	-31	NA	65694633	65752488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUSG00000029203.17_65694634_65752488_4	chr5	+	991	7	NNC	ENSMUSG00000029203.17	novel	4682	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	641.276504758716	1503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATACTTTTAATTTT	NA	False	NA	20	True	AATAAA	-31	NA	65694633	65752488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_65694890_65723336_65723430_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUSG00000029203.17_65694634_65752488_5	chr5	+	381	3	NNC	ENSMUSG00000029203.17	novel	890	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	639.5	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATACTTTTAATTTT	NA	False	NA	20	True	AATAAA	-31	NA	65694633	65752488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_65694890_65723331_65723391_65752422
ENSMUSG00000029203.17_65694634_65752488_6	chr5	+	839	5	FSM	ENSMUSG00000029203.17	ENSMUST00000201984.4	1449	5	0	610	0	0	multi-exon	FALSE	canonical	3	45	junction_1	582.178398345387	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATACTTTTAATTTT	NA	False	NA	20	True	AATAAA	-31	NA	65694633	65752488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_65694890_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUSG00000029203.17_65694634_65753098_1	chr5	+	1602	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	58	3233	0	0	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGACATTAATTTTTAAAA	NA	False	NA	26	True	AATAAA	-27	NA	65694633	65753098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUSG00000029203.17_65694827_65752488_1	chr5	+	799	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	251	3843	0	0	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATACTTTTAATTTT	NA	False	NA	20	True	AATAAA	-31	NA	65694826	65752488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUSG00000029209.16_69732344_69749636_1	chr5	-	1841	7	FSM	ENSMUSG00000029209.16	ENSMUST00000173927.8	1011	7	-19	-811	0	0	multi-exon	TRUE	canonical	3	26	junction_3	36.2142544065486	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTATCTCATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-45	NA	69749636	69732343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_69733297_69735320_69735496_69736850_69737030_69742316_69742500_69743807_69743910_69747003_69747167_69749550
ENSMUSG00000029209.16_69732513_69749636_1	chr5	-	1678	7	FSM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	47	169	0	0	multi-exon	FALSE	canonical	3	104	junction_4	11.5998084275369	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGATTATTGTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	69749636	69732512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
ENSMUSG00000029213.12_72316354_72325499_2	chr5	-	1542	5	NNC	ENSMUSG00000029213.12	novel	3895	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	141.390416931276	1767	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTGTTGCTTGATTTC	NA	False	NA	-4	True	AATACA	-14	NA	72325499	72316353	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325305
ENSMUSG00000029213.12_72316354_72325499_3	chr5	-	1433	5	NNC	ENSMUSG00000029213.12	novel	3895	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	149.937486973738	1783	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTGTTGCTTGATTTC	NA	False	NA	-4	True	AATACA	-14	NA	72325499	72316353	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325414
ENSMUSG00000029223.13_66833585_66844577_1	chr5	+	988	9	NNC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	219.386502547445	2194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTATTTTCTCTT	NA	False	NA	33	True	AATAAA	-22	NA	66833584	66844577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_66833666_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184_66844322_66844347
ENSMUSG00000029223.13_66833585_66844577_3	chr5	+	992	9	NNC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	219.386502547445	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTATTTTCTCTT	NA	False	NA	33	True	AATAAA	-22	NA	66833584	66844577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_66833666_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184_66844332_66844353
ENSMUSG00000029223.13_66833585_66844577_4	chr5	+	989	9	NNC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	219.386502547445	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTATTTTCTCTT	NA	False	NA	33	True	AATAAA	-22	NA	66833584	66844577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_66833666_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184_66844326_66844350
ENSMUSG00000029223.13_66833585_66844577_5	chr5	+	1007	9	NNC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.970933125348	4975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTATTTTCTCTT	NA	False	NA	33	True	AATAAA	-22	NA	66833584	66844577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_66833683_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184_66844324_66844347
ENSMUSG00000029223.13_66833585_66844577_6	chr5	+	1014	8	NIC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	178.588113506231	1924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTATTTTCTCTT	NA	False	NA	33	True	AATAAA	-22	NA	66833584	66844577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_66833666_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ENSMUSG00000029223.13_66833585_66844577_7	chr5	+	988	9	NNC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	217.687706359362	2182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTATTTTCTCTT	NA	False	NA	33	True	AATAAA	-22	NA	66833584	66844577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_66833666_66834286_66834416_66837005_66837157_66839786_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184_66844324_66844347
ENSMUSG00000029227.16_74696164_74756814_1	chr5	+	1982	17	FSM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	54	2637	0	8	multi-exon	FALSE	canonical	3	373	junction_9	134.520909155417	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTCTTGTAATATTTA	NA	False	NA	30	True	AATAAA	-31	NA	74696163	74756814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUSG00000029233.16_76288153_76303093_1	chr5	+	1479	6	FSM	ENSMUSG00000029233.16	ENSMUST00000031143.13	1747	6	35	233	0	0	multi-exon	FALSE	canonical	3	49	junction_4	4.14728827066554	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATATGAATGTACAGTA	NA	False	NA	NA	False	AATAAA	-34	NA	76288152	76303093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
ENSMUSG00000029233.16_76288153_76303326_1	chr5	+	1690	7	NNC	ENSMUSG00000029233.16	novel	1747	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	20.8439972707305	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCTGGACTGGGTAACAT	NA	False	NA	15	True	AATAAA	-27	NA	76288152	76303326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369_76302946_76302967
ENSMUSG00000029234.14_76347292_76357092_1	chr5	+	1324	5	ISM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	15565	0	0	0	3prime_fragment	FALSE	canonical	3	1062	junction_2	74.4143803306861	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTCCTCGTGTGTTA	NA	False	NA	7	True	AATAAA	-15	NA	76347291	76357092	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_76347418_76351953_76352130_76352483_76352664_76355648_76355755_76356356
ENSMUSG00000029235.15_76459974_76478980_1	chr5	-	949	5	NIC	ENSMUSG00000029235.15	novel	1181	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	37.1483512420134	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGCACCATGTGT	NA	False	NA	NA	False	AATAAA	-31	NA	76478980	76459973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_76460446_76466973_76467118_76472152_76472244_76472839_76472961_76478859
ENSMUSG00000029235.15_76460112_76478980_1	chr5	-	1020	6	FSM	ENSMUSG00000029235.15	ENSMUST00000031145.7	1181	6	23	138	0	-138	multi-exon	FALSE	canonical	3	53	junction_1	18.0554700852678	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTGACTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	76478980	76460111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_76460446_76465647_76465857_76466973_76467118_76472152_76472244_76472839_76472961_76478859
ENSMUSG00000029235.15_76460265_76478980_1	chr5	-	867	6	FSM	ENSMUSG00000029235.15	ENSMUST00000031145.7	1181	6	23	291	0	-291	multi-exon	FALSE	canonical	3	53	junction_1	18.0554700852678	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCGAATGCCTTATTTC	NA	False	NA	NA	False	AATAAA	-16	NA	76478980	76460264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_76460446_76465647_76465857_76466973_76467118_76472152_76472244_76472839_76472961_76478859
ENSMUSG00000029246.15_77099195_77115356_1	chr5	-	2179	10	NIC	ENSMUSG00000029246.15	novel	3981	11	NA	NA	-15931	-36304	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	9466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACCTCGGCCTCCTCCCC	NA	False	NA	NA	False	NA	NA	NA	77115356	77099194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_77099350_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUSG00000029247.18_77099195_77115356_1	chr5	+	2078	10	FSM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	-20	-196	0	0	multi-exon	FALSE	canonical	3	185	junction_1	1007.72571224074	9656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGCTGTGTGGTCTATA	327	False	NA	19	True	ATTAAA	-22	NA	77099194	77115356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_77099249_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUSG00000029247.18_77099480_77115356_1	chr5	+	2060	10	FSM	ENSMUSG00000029247.18	ENSMUST00000120912.8	2345	10	285	0	-144	0	multi-exon	FALSE	canonical	3	123	junction_1	1026.8195172413	9148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGCTGTGTGGTCTATA	612	False	NA	19	True	ATTAAA	-22	NA	77099479	77115356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_77099516_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUSG00000029247.18_77099624_77115356_1	chr5	+	2016	9	FSM	ENSMUSG00000029247.18	ENSMUST00000031160.16	2482	9	470	-4	0	0	multi-exon	FALSE	canonical	3	3017	junction_4	215.03720608304	7578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGCTGTGTGGTCTATA	756	False	NA	19	True	ATTAAA	-22	NA	77099623	77115356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUSG00000029250.6_77458338_77497171_1	chr5	+	3801	25	FSM	ENSMUSG00000029250.6	ENSMUST00000031167.6	4145	25	344	0	0	0	multi-exon	TRUE	canonical	3	372	junction_9	39.992360381564	695	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTTATCTTTGATT	NA	False	NA	16	True	AATAAA	-16	NA	77458337	77497171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ENSMUSG00000029265.5_108423523_108428392_1	chr5	+	2084	2	ISM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	6760	0	-1263	0	3prime_fragment	FALSE	canonical	3	219	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTTATATTTAATGAT	NA	False	NA	NA	False	AATAAA	-21	NA	108423522	108428392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_108423599_108426384
ENSMUSG00000029267.18_108208602_108255371_1	chr5	+	2465	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	35	intron_retention	FALSE	canonical	0	0	junction_2	719.65759999078	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGACTAGACTTCATTG	NA	False	NA	9	True	AATATA	-18	NA	108208601	108255371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251890_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108255371_2	chr5	+	2820	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	35	intron_retention	FALSE	canonical	0	0	junction_4	754.467682790323	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGACTAGACTTCATTG	NA	False	NA	9	True	AATATA	-18	NA	108208601	108255371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108217027_108217230_108221172_108221321_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108255371_3	chr5	+	2672	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	35	intron_retention	FALSE	canonical	0	0	junction_3	750.669496738301	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGACTAGACTTCATTG	NA	False	NA	9	True	AATATA	-18	NA	108208601	108255371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108217027_108217230_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108255371_4	chr5	+	2618	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	35	intron_retention	FALSE	canonical	0	0	junction_3	716.223937668163	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGACTAGACTTCATTG	NA	False	NA	9	True	AATATA	-18	NA	108208601	108255371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108221172_108221321_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108256136_1	chr5	+	3233	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	0	intron_retention	FALSE	canonical	0	0	junction_2	706.349858390996	578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTAGCTCTTCATTTT	NA	False	NA	104	True	AGTAAA	-14	NA	108208601	108256136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235808_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108256654_1	chr5	+	2458	3	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-4938	-216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	879.5	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTTTAACTGAACACC	NA	False	NA	NA	False	NA	NA	NA	108208601	108256654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208754_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108256654_2	chr5	+	3629	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	-216	intron_retention	FALSE	canonical	0	0	junction_2	732.257310807321	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTTTAACTGAACACC	NA	False	NA	NA	False	NA	NA	NA	108208601	108256654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108256654_3	chr5	+	3901	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	-216	intron_retention	FALSE	canonical	0	0	junction_3	716.223937668163	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTTTAACTGAACACC	NA	False	NA	NA	False	NA	NA	NA	108208601	108256654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108221172_108221321_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108256654_4	chr5	+	4103	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	-216	intron_retention	FALSE	canonical	0	0	junction_4	754.467682790323	766	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTTTAACTGAACACC	NA	False	NA	NA	False	NA	NA	NA	108208601	108256654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108217027_108217230_108221172_108221321_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108256654_5	chr5	+	3751	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	-216	intron_retention	FALSE	canonical	0	0	junction_2	706.349858390996	1251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTTTAACTGAACACC	NA	False	NA	NA	False	NA	NA	NA	108208601	108256654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235808_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108256654_6	chr5	+	3955	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	-216	intron_retention	FALSE	canonical	0	0	junction_3	750.669496738301	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTTTAACTGAACACC	NA	False	NA	NA	False	NA	NA	NA	108208601	108256654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108217027_108217230_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108256654_7	chr5	+	3748	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	-216	intron_retention	FALSE	canonical	0	0	junction_2	719.65759999078	888	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTTTAACTGAACACC	NA	False	NA	NA	False	NA	NA	NA	108208601	108256654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251890_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108256654_8	chr5	+	3815	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	-216	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	756.984209434605	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTTTAACTGAACACC	NA	False	NA	NA	False	NA	NA	NA	108208601	108256654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108221172_108221321_108228776_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108256872_1	chr5	+	3969	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	2	intron_retention	FALSE	canonical	0	0	junction_2	706.349858390996	2148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208601	108256872	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235808_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108256872_2	chr5	+	4173	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	2	intron_retention	FALSE	canonical	0	0	junction_3	750.669496738301	1104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208601	108256872	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108217027_108217230_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108256872_3	chr5	+	2676	3	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-4938	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	879.5	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208601	108256872	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208754_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108256872_4	chr5	+	3847	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	2	intron_retention	FALSE	canonical	0	0	junction_2	732.257310807321	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208601	108256872	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108256872_5	chr5	+	4119	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	2	intron_retention	FALSE	canonical	0	0	junction_3	716.223937668163	1716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208601	108256872	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108221172_108221321_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108256872_6	chr5	+	4321	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	2	intron_retention	FALSE	canonical	0	0	junction_4	754.467682790323	1364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208601	108256872	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108217027_108217230_108221172_108221321_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108208602_108256872_7	chr5	+	3966	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4938	2	intron_retention	FALSE	canonical	0	0	junction_2	719.65759999078	1815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208601	108256872	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108208730_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251890_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_108213583_108256654_1	chr5	+	3873	15	FSM	ENSMUSG00000029267.18	ENSMUST00000124195.8	2549	15	6	-1330	0	-216	multi-exon	FALSE	canonical	0	0	junction_2	705.472066587114	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTTTAACTGAACACC	NA	False	NA	NA	False	NA	NA	NA	108213582	108256654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108213832_108228690_108228894_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029270.11_108048368_108055921_1	chr5	-	1089	8	NNC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	64943	7551	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	14874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCCTCAAGATGCGCGGG	9608	False	NA	NA	False	NA	NA	NA	108055921	108048367	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_108048513_108049735_108049806_108049893_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ENSMUSG00000029270.11_108048438_108055921_1	chr5	-	1016	8	NNC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	64943	7481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGAGTCACGTACGCATG	9608	False	NA	NA	False	AAAAAG	-1	NA	108055921	108048437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055063_108055144_108055762
ENSMUSG00000029270.11_108048438_108055921_2	chr5	-	992	8	NNC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	64943	7481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGAGTCACGTACGCATG	9608	False	NA	NA	False	AAAAAG	-1	NA	108055921	108048437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052615_108052761_108055054_108055144_108055762
ENSMUSG00000029270.11_108048438_108055921_3	chr5	-	1008	8	NNC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	64943	7481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGAGTCACGTACGCATG	9608	False	NA	NA	False	AAAAAG	-1	NA	108055921	108048437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_108048517_108049756_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ENSMUSG00000029270.11_108048438_108055921_4	chr5	-	880	8	NNC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	64943	7481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGAGTCACGTACGCATG	9608	False	NA	NA	False	AAAAAG	-1	NA	108055921	108048437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051590_108052582_108052761_108055054_108055144_108055762
ENSMUSG00000029270.11_108048438_108055921_5	chr5	-	1003	8	NNC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	64943	7481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGAGTCACGTACGCATG	9608	False	NA	NA	False	AAAAAG	-1	NA	108055921	108048437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_108048513_108049735_108049784_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ENSMUSG00000029270.11_108048438_108055921_6	chr5	-	1014	8	NNC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	64943	7481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGAGTCACGTACGCATG	9608	False	NA	NA	False	AAAAAG	-1	NA	108055921	108048437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_108048517_108049748_108049806_108049889_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ENSMUSG00000029270.11_108048438_108055921_7	chr5	-	1016	8	NNC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	64943	7481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGAGTCACGTACGCATG	9608	False	NA	NA	False	AAAAAG	-1	NA	108055921	108048437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_108048517_108049748_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ENSMUSG00000029270.11_108048438_108056871_1	chr5	-	1975	8	NIC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	63993	7481	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	67953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGAGTCACGTACGCATG	9347	False	NA	NA	False	AAAAAG	-1	NA	108056871	108048437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ENSMUSG00000029270.11_108048740_108055921_1	chr5	-	1148	8	NIC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	64943	7179	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	4449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTGGCAGCCGGACTCG	9608	False	NA	NA	False	NA	NA	NA	108055921	108048739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_108048938_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ENSMUSG00000029270.11_108056878_108134899_1	chr5	-	1710	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	52	959	0	691	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAGGTAAATTCAAATGAC	NA	False	NA	NA	False	NA	NA	NA	108134899	108056877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
ENSMUSG00000029276.14_107696888_107745505_1	chr5	-	1984	19	NIC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	56.5136550744733	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCATTATACTTTATAC	NA	False	NA	NA	False	AATAAA	-17	NA	107745505	107696887	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723231_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ENSMUSG00000029276.14_107745583_107809704_1	chr5	-	2286	13	NIC	ENSMUSG00000029276.14	novel	1945	19	NA	NA	-63950	-22396	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCGGGCCCAGGGAGGG	NA	False	NA	NA	False	NA	NA	NA	107809704	107745582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
ENSMUSG00000029304.15_104582987_104588776_1	chr5	+	1267	7	FSM	ENSMUSG00000029304.15	ENSMUST00000031243.15	1410	7	3	140	0	-133	multi-exon	FALSE	canonical	3	5474	junction_3	341.773032223953	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAATTTACTGAAACAAGC	NA	False	NA	-83	True	AATAAA	-17	NA	104582986	104588776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUSG00000029310.14_104194735_104213245_1	chr5	+	1221	8	NNC	ENSMUSG00000029310.14	novel	1488	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	118.273808924677	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTTCAAGTTCTCCC	NA	False	NA	20	True	AATAAA	-23	NA	104194734	104213245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_104194746_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ENSMUSG00000029313.19_103840240_103966840_1	chr5	+	1474	8	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	0	2546	combination_of_known_junctions	FALSE	canonical	3	248	junction_2	18.2432542746795	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGGAACCTCGTAAGTAA	NA	False	NA	NA	False	NA	NA	NA	103840239	103966840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800
ENSMUSG00000029313.19_103840240_103981766_1	chr5	+	2173	12	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	0	-8353	combination_of_known_junctions	FALSE	canonical	3	246	junction_11	17.4947453740396	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCAGGCCGCGTGCCGTGG	NA	False	NA	NA	False	NA	NA	NA	103840239	103981766	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335
ENSMUSG00000029326.14_100187844_100216620_1	chr5	+	1805	6	NNC	ENSMUSG00000029326.14	novel	1833	6	NA	NA	0	1	intron_retention	FALSE	canonical	3	76	junction_1	168.151122505917	1931	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTCATACAGACGTG	NA	False	NA	16	True	AATAAA	-16	NA	100187843	100216620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_100188133_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ENSMUSG00000029328.16_100181436_100186769_1	chr5	-	2440	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	312	0	-15	0	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	-14	True	AATAAA	-18	NA	100186769	100181435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUSG00000029328.16_100182580_100186769_1	chr5	-	2051	8	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	230	junction_1	297.206243239284	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUSG00000029328.16_100182580_100186769_2	chr5	-	1401	9	FSM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	754	-6	-15	0	multi-exon	FALSE	canonical	3	230	junction_2	358.236915322807	1556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUSG00000029328.16_100182580_100186769_3	chr5	-	2700	6	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	934	junction_2	94.4681957062799	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUSG00000029328.16_100182580_100186769_4	chr5	-	1547	9	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_8	425.280771226492	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ENSMUSG00000029328.16_100182580_100186769_5	chr5	-	1296	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	312	1144	-15	0	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	1788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUSG00000029328.16_100182580_100186769_6	chr5	-	2561	7	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	110	junction_6	363.263181300953	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ENSMUSG00000029328.16_100182687_100186769_1	chr5	-	1189	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	312	1251	-15	0	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTACCTGTGTTATGAT	NA	False	NA	-121	True	NA	NA	NA	100186769	100182686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUSG00000029328.16_100182687_100186769_2	chr5	-	1294	9	FSM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	754	101	-15	0	multi-exon	FALSE	canonical	3	230	junction_2	358.236915322807	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTACCTGTGTTATGAT	NA	False	NA	-121	True	NA	NA	NA	100186769	100182686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUSG00000029344.16_112424570_112463222_1	chr5	+	905	6	NIC	ENSMUSG00000029344.16	novel	1835	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	115.943779479539	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	22	True	AATAAA	-32	NA	112424569	112463222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_112424638_112451765_112451838_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ENSMUSG00000029345.14_112474287_112485254_1	chr5	+	2812	14	FSM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	63	685	0	115	multi-exon	FALSE	canonical	3	92	junction_4	15.3503464486856	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATGAATAACGTCTCTA	NA	False	NA	25	True	AATAAA	-17	NA	112474286	112485254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
ENSMUSG00000029352.15_113223709_113227810_1	chr5	-	690	4	ISM	ENSMUSG00000029352.15	ENSMUST00000076069.13	816	5	723	4	447	0	3prime_fragment	FALSE	canonical	3	12	junction_2	4.78423336480244	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGCTCTGTCTGTGTCAC	NA	False	NA	NA	False	AATAAA	-13	NA	113227810	113223708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_113223938_113225400_113225544_113226248_113226382_113227625
ENSMUSG00000029359.14_118174096_118199935_1	chr5	+	877	8	NIC	ENSMUSG00000029359.14	novel	785	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	22.6445470302252	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGGCATCCCCATCTGTC	4368	False	NA	9	True	AATAAA	-14	NA	118174095	118199935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_118174195_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199666
ENSMUSG00000029363.15_117516470_117527112_1	chr5	-	2494	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	0	302	0	0	multi-exon	TRUE	canonical	3	1613	junction_7	125.046431376509	2240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTGTGTGAGGCGTCT	NA	False	NA	NA	False	AATATA	-16	NA	117527112	117516469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ENSMUSG00000029363.15_117517210_117527087_1	chr5	-	744	6	NNC	ENSMUSG00000029363.15	novel	3751	9	NA	NA	0	472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	752.193964346963	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGCTGGGCTGTCTACCT	NA	False	NA	-16	True	AATAAA	-20	NA	117527087	117517209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_117517487_117522590_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ENSMUSG00000029363.15_117517210_117527112_1	chr5	-	1749	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	553.020288958733	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGCTGGGCTGTCTACCT	NA	False	NA	-16	True	AATAAA	-20	NA	117527112	117517209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522665_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ENSMUSG00000029363.15_117517210_117527112_2	chr5	-	1759	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	552.384431351934	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGCTGGGCTGTCTACCT	NA	False	NA	-16	True	AATAAA	-20	NA	117527112	117517209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522590_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ENSMUSG00000029363.15_117517210_117527112_3	chr5	-	1752	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	552.384431351934	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGCTGGGCTGTCTACCT	NA	False	NA	-16	True	AATAAA	-20	NA	117527112	117517209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_117517966_117518827_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ENSMUSG00000029363.15_117517210_117527112_4	chr5	-	1754	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	0	1042	0	472	multi-exon	FALSE	canonical	3	1613	junction_7	125.046431376509	2045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGCTGGGCTGTCTACCT	NA	False	NA	-16	True	AATAAA	-20	NA	117527112	117517209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ENSMUSG00000029363.15_117517514_117527112_1	chr5	-	1450	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	0	1346	0	168	multi-exon	FALSE	canonical	3	1613	junction_7	125.046431376509	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATGCCTATAACCTCAG	NA	False	NA	19	True	NA	NA	NA	117527112	117517513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ENSMUSG00000029364.16_117495490_117516666_1	chr5	+	2300	9	FSM	ENSMUSG00000029364.16	ENSMUST00000031309.16	2421	9	121	0	120	0	multi-exon	FALSE	canonical	3	560	junction_4	52.4760361974873	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117495489	117516666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ENSMUSG00000029364.16_117516470_117527112_1	chr5	+	2469	12	NNC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	1955	10446	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGAGGCTTCGCCTCCGGCT	6223	False	NA	NA	False	NA	NA	NA	117516469	117527112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_117516722_117516746_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ENSMUSG00000029366.11_88913036_88929356_1	chr5	+	1113	7	FSM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	181	1784	181	-1784	multi-exon	FALSE	canonical	3	177	junction_6	17.3052657368277	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGGGAGTCTGGAGGTA	NA	False	NA	NA	False	AATAAA	-19	NA	88913035	88929356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_88913206_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
ENSMUSG00000029366.11_88913036_88931140_1	chr5	+	2897	7	FSM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	181	0	181	0	multi-exon	FALSE	canonical	3	177	junction_6	17.3052657368277	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGACTTTAAAATTTTC	NA	False	NA	27	True	AATAAA	-24	NA	88913035	88931140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_88913206_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
ENSMUSG00000029385.15_93416400_93424086_1	chr5	+	2346	7	FSM	ENSMUSG00000029385.15	ENSMUST00000121127.2	2570	7	227	-3	-167	2	multi-exon	FALSE	canonical	3	45	junction_2	9.62057979310787	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTCCTATTTCAGTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	93416399	93424086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
ENSMUSG00000029387.11_124717203_124734904_1	chr5	+	1805	13	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	0	254	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_2	193.045097638407	1633	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATTTTCCTTAGAGTGTT	NA	False	NA	19	True	AATAAA	-20	NA	124717202	124734904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_124717265_124720510_124720591_124722024_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ENSMUSG00000029388.15_124708716_124717124_1	chr5	-	1503	9	FSM	ENSMUSG00000029388.15	ENSMUST00000031334.15	2013	9	70	440	0	-440	multi-exon	FALSE	canonical	0	0	junction_4	226.339761199839	2692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACGGTATTGCCTCTCTA	NA	False	NA	-5	True	AATAAA	-17	NA	124717124	124708715	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124717063
ENSMUSG00000029388.15_124708716_124717124_2	chr5	-	1800	9	NIC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	0	-440	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	291.131172111473	2758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACGGTATTGCCTCTCTA	NA	False	NA	-5	True	AATAAA	-17	NA	124717124	124708715	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124716766
ENSMUSG00000029390.14_124678892_124688564_1	chr5	+	1935	4	FSM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	134	5	-126	5	multi-exon	FALSE	canonical	3	3477	junction_2	89.3395520223577	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATTTTGTGTTTTATAT	NA	False	NA	7	True	AATAAA	-17	NA	124678891	124688564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143
ENSMUSG00000029394.12_124483480_124492398_1	chr5	-	979	4	FSM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	336	0	336	0	multi-exon	FALSE	canonical	3	1091	junction_3	81.9308651648856	736	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGAGGTCTTAAGTGCT	4590	False	NA	2	True	AATAAA	-38	NA	124492398	124483479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_124484218_124486663_124486791_124488140_124488236_124492379
ENSMUSG00000029397.16_92097144_92110585_1	chr5	-	1244	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	342	381	0	-284	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTTCTTTTCTCTCT	1677	False	NA	0	True	ATTAAA	-24	NA	92110585	92097143	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
ENSMUSG00000029397.16_92097144_92110710_1	chr5	-	1369	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	217	381	-116	-284	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTTCTTTTCTCTCT	1552	False	NA	0	True	ATTAAA	-24	NA	92110710	92097143	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
ENSMUSG00000029397.16_92097144_92110927_1	chr5	-	1586	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	0	381	0	-284	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTTCTTTTCTCTCT	1335	False	NA	0	True	ATTAAA	-24	NA	92110927	92097143	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
ENSMUSG00000029397.16_92110749_92119925_1	chr5	-	2944	4	NNC	ENSMUSG00000029397.16	novel	1967	9	NA	NA	-8998	-1209	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATGCTGCAGATCACGTG	NA	False	NA	NA	False	NA	NA	NA	92119925	92110748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_92110835_92112954_92113164_92114310_92114434_92117399
ENSMUSG00000029404.16_124254162_124256259_1	chr5	+	729	5	NNC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	265.607205286302	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254161	124256259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_124254282_124255047_124255257_124255333_124255452_124255892_124255963_124256047
ENSMUSG00000029404.16_124254162_124256259_2	chr5	+	862	5	NNC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	265.607205286302	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254161	124256259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_124254345_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ENSMUSG00000029404.16_124254162_124256259_3	chr5	+	1003	6	NIC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	229.659399981799	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254161	124256259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_124254308_124254496_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ENSMUSG00000029404.16_124254162_124256259_4	chr5	+	1105	5	FSM	ENSMUSG00000029404.16	ENSMUST00000122394.8	982	5	-23	-100	0	0	multi-exon	FALSE	canonical	3	15	junction_1	259.116286635943	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254161	124256259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_124254588_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ENSMUSG00000029404.16_124254162_124256259_5	chr5	+	1131	5	NNC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_1	256.087265399902	1085	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254161	124256259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_124254675_124255038_124255257_124255333_124255452_124255892_124255963_124256047
ENSMUSG00000029404.16_124254162_124256259_6	chr5	+	750	5	NNC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	265.607205286302	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254161	124256259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_124254303_124255047_124255257_124255333_124255452_124255892_124255963_124256047
ENSMUSG00000029405.17_92200023_92231372_1	chr5	-	4269	12	FSM	ENSMUSG00000029405.17	ENSMUST00000169094.8	2716	12	0	-1553	0	0	multi-exon	FALSE	canonical	3	261	junction_11	559.822935407495	1365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATCTATGTCCCTA	NA	False	NA	-18	True	AATAAA	-15	NA	92231372	92200022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ENSMUSG00000029405.17_92200023_92231578_1	chr5	-	4281	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-61	-2336	0	0	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATCTATGTCCCTA	NA	False	NA	-18	True	AATAAA	-15	NA	92231578	92200022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ENSMUSG00000029405.17_92201245_92231578_1	chr5	-	3059	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-61	-1114	0	331	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAATTTAAGTCTGGGA	NA	False	NA	NA	False	NA	NA	NA	92231578	92201244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ENSMUSG00000029405.17_92201245_92231578_2	chr5	-	2960	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	0	1222	0	331	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAATTTAAGTCTGGGA	NA	False	NA	NA	False	NA	NA	NA	92231578	92201244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ENSMUSG00000029405.17_92201576_92231372_1	chr5	-	2617	11	FSM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	44	1571	0	0	multi-exon	FALSE	canonical	3	261	junction_10	456.056180749697	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTTCTTCAGTTAAC	NA	False	NA	-9	True	AGTAAA	-17	NA	92231372	92201575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ENSMUSG00000029405.17_92201576_92231578_1	chr5	-	2629	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	0	1553	0	0	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTTCTTCAGTTAAC	NA	False	NA	-9	True	AGTAAA	-17	NA	92231578	92201575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ENSMUSG00000029405.17_92201576_92231578_2	chr5	-	2728	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-61	-783	0	0	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTTCTTCAGTTAAC	NA	False	NA	-9	True	AGTAAA	-17	NA	92231578	92201575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ENSMUSG00000029410.12_92374538_92376880_1	chr5	-	826	3	NNC	ENSMUSG00000029410.12	novel	732	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	10	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTACCTGTGTGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	92376880	92374537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_92375087_92376505_92376594_92376691
ENSMUSG00000029413.15_92406163_92426024_1	chr5	-	1764	11	FSM	ENSMUSG00000029413.15	ENSMUST00000113102.10	2414	11	5	645	0	129	multi-exon	FALSE	canonical	3	29	junction_5	5.44885309033011	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGACACCAAATAATATCC	9203	False	NA	NA	False	AATAAA	-29	NA	92426024	92406162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92406803_92407412_92407491_92409210_92409240_92410367_92410435_92411268_92411332_92411449_92411623_92412939_92413017_92415900_92415992_92420302_92420430_92424777_92424943_92425770
ENSMUSG00000029414.12_123956532_123959654_1	chr5	+	520	4	ISM	ENSMUSG00000029414.12	ENSMUST00000197265.2	859	9	7076	0	-1078	0	3prime_fragment	FALSE	canonical	3	444	junction_1	50.7564993101595	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGGTTTCTTGTGTCA	NA	False	NA	27	True	AATAAA	-19	NA	123956531	123959654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_123956604_123957058_123957205_123957932_123958024_123959443
ENSMUSG00000029422.16_123866493_123887444_1	chr5	-	2310	12	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	199.263561501216	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCCATTGTATGCTAT	4354	False	NA	NA	False	AATAAA	-11	NA	123887444	123866492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ENSMUSG00000029422.16_123866493_123887444_2	chr5	-	2134	10	NNC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	161.648452582208	1175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCCATTGTATGCTAT	4354	False	NA	NA	False	AATAAA	-11	NA	123887444	123866492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878921_123881700_123881742_123883017_123883175_123887351
ENSMUSG00000029422.16_123866493_123887444_3	chr5	-	2139	10	FSM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	33	-577	0	0	multi-exon	FALSE	canonical	3	403	junction_7	46.2523939987681	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCCATTGTATGCTAT	4354	False	NA	NA	False	AATAAA	-11	NA	123887444	123866492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
ENSMUSG00000029422.16_123866787_123887444_1	chr5	-	1845	10	FSM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	33	-283	0	0	multi-exon	FALSE	canonical	3	403	junction_7	46.2523939987681	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4354	False	NA	-8	True	AATAAA	-13	NA	123887444	123866786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
ENSMUSG00000029422.16_123866787_123887444_2	chr5	-	2038	12	FSM	ENSMUSG00000029422.16	ENSMUST00000050827.14	2344	12	8	298	0	0	multi-exon	FALSE	canonical	3	64	junction_7	200.336700053759	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4354	False	NA	-8	True	AATAAA	-13	NA	123887444	123866786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ENSMUSG00000029422.16_123866787_123887444_3	chr5	-	1840	10	NNC	ENSMUSG00000029422.16	novel	1595	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	161.648452582208	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4354	False	NA	-8	True	AATAAA	-13	NA	123887444	123866786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878921_123881700_123881742_123883017_123883175_123887351
ENSMUSG00000029422.16_123866787_123887444_4	chr5	-	2016	12	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	199.263561501216	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4354	False	NA	-8	True	AATAAA	-13	NA	123887444	123866786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ENSMUSG00000029422.16_123866787_123887444_5	chr5	-	1923	11	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	166.25718029607	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4354	False	NA	-8	True	AATAAA	-13	NA	123887444	123866786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123887351
ENSMUSG00000029422.16_123867030_123887444_1	chr5	-	1602	10	FSM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	33	-40	0	0	multi-exon	FALSE	canonical	3	403	junction_7	46.2523939987681	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATTTTTTAGTTCATGA	4354	False	NA	NA	False	ATTAAA	-22	NA	123887444	123867029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
ENSMUSG00000029427.12_123837862_123859006_1	chr5	-	2692	14	NNC	ENSMUSG00000029427.12	novel	4350	14	NA	NA	-81	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	111.512569939168	746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGGTTTAATAAATTAG	6498	False	NA	-38	True	AATAAA	-20	NA	123859006	123837861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857605_123858788
ENSMUSG00000029427.12_123837862_123859006_2	chr5	-	2683	14	NNC	ENSMUSG00000029427.12	novel	4286	14	NA	NA	-81	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	111.512569939168	871	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGGTTTAATAAATTAG	6498	False	NA	-38	True	AATAAA	-20	NA	123859006	123837861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857590_123858782
ENSMUSG00000029427.12_123838554_123859006_3	chr5	-	1996	14	NNC	ENSMUSG00000029427.12	novel	4350	14	NA	NA	-81	-692	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	111.512569939168	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTGACATGAGCAAGTT	6498	False	NA	NA	False	NA	NA	NA	123859006	123838553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857605_123858792
ENSMUSG00000029427.12_123838554_123859006_4	chr5	-	1991	14	NNC	ENSMUSG00000029427.12	novel	4286	14	NA	NA	-81	-692	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	111.512569939168	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTGACATGAGCAAGTT	6498	False	NA	NA	False	NA	NA	NA	123859006	123838553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857590_123858782
ENSMUSG00000029430.14_129097266_129100230_1	chr5	+	1087	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	133	1157	0	-1157	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	72303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	475	False	NA	NA	False	AATAAA	-23	NA	129097265	129100230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ENSMUSG00000029430.14_129097266_129100230_2	chr5	+	1082	7	NNC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	0	-1157	at_least_one_novel_splicesite	FALSE	canonical	3	335	junction_4	5449.54944365944	64040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	475	False	NA	NA	False	AATAAA	-23	NA	129097265	129100230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099071_129099255_129099438_129099610_129099837
ENSMUSG00000029430.14_129097266_129101387_1	chr5	+	2244	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	133	0	0	0	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	73842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGAGTCATCTCTAGT	475	False	NA	21	True	AATATA	-23	NA	129097265	129101387	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ENSMUSG00000029431.6_123649768_123662196_1	chr5	+	1533	6	NIC	ENSMUSG00000086753.2	novel	1862	2	NA	NA	3310	10122	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2009	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCCGGACGCACGCGCCG	8004	False	NA	NA	False	NA	NA	NA	123649767	123662196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUSG00000029431.6_123649768_123662196_2	chr5	+	1527	6	NNC	ENSMUSG00000086753.2	novel	1862	2	NA	NA	3310	10122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	742	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCCGGACGCACGCGCCG	8004	False	NA	NA	False	NA	NA	NA	123649767	123662196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_123650765_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUSG00000029433.17_123649967_123662196_2	chr5	-	1328	6	NIC	ENSMUSG00000029433.17	novel	1576	6	NA	NA	0	-199	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	255.210031150815	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTTCAGGCTGTC	8965	False	NA	-9	True	ATTAAA	-20	NA	123662196	123649966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661439_123662133
ENSMUSG00000029433.17_123649967_123662196_3	chr5	-	1281	6	NNC	ENSMUSG00000029433.17	novel	1576	6	NA	NA	0	-199	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_5	249.639419964075	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTTCAGGCTGTC	8965	False	NA	-9	True	ATTAAA	-20	NA	123662196	123649966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661392_123662133
ENSMUSG00000029433.17_123649967_123662196_4	chr5	-	1212	7	NNC	ENSMUSG00000029433.17	novel	3386	7	NA	NA	0	-199	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	250.348701259308	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTTCAGGCTGTC	8965	False	NA	-9	True	ATTAAA	-20	NA	123662196	123649966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_123650075_123650196_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUSG00000029434.13_123667165_123711059_1	chr5	-	3750	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	42	443	-17	-443	multi-exon	FALSE	canonical	3	140	junction_1	30.3840007240653	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTCTCAATTTACAC	9975	False	NA	-11	True	ATTAAA	-20	NA	123711059	123667164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ENSMUSG00000029434.13_123668807_123711059_1	chr5	-	2108	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	42	2085	-17	-2085	multi-exon	FALSE	canonical	3	140	junction_1	30.3840007240653	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGTCTCAAGTCTTC	9975	False	NA	-5	True	NA	NA	NA	123711059	123668806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ENSMUSG00000029434.13_123692828_123711059_1	chr5	-	1236	8	NIC	ENSMUSG00000029434.13	novel	532	6	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	74.1113337885533	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGTGTGTTCCTATGTAA	9975	False	NA	NA	False	ATTAAA	-18	NA	123711059	123692827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_123693074_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ENSMUSG00000029438.10_123482563_123510242_1	chr5	+	1853	6	FSM	ENSMUSG00000029438.10	ENSMUST00000031391.9	4718	6	52	2813	0	-1903	multi-exon	FALSE	canonical	3	24	junction_2	4.53431361950185	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAACCCCAGGCAGGATG	NA	False	NA	NA	False	NA	NA	NA	123482562	123510242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_123482785_123489929_123490012_123494003_123494101_123499253_123499422_123507395_123507518_123509080
ENSMUSG00000029438.10_123482563_123512145_1	chr5	+	3756	6	FSM	ENSMUSG00000029438.10	ENSMUST00000031391.9	4718	6	52	910	0	0	multi-exon	FALSE	canonical	3	24	junction_2	4.53431361950185	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGGCTGAGCCCATT	NA	False	NA	NA	False	AATAAA	-21	NA	123482562	123512145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_123482785_123489929_123490012_123494003_123494101_123499253_123499422_123507395_123507518_123509080
ENSMUSG00000029440.16_123366321_123386590_1	chr5	+	925	6	FSM	ENSMUSG00000029440.16	ENSMUST00000100729.9	2597	6	68	1604	0	0	multi-exon	FALSE	canonical	3	158	junction_2	18.6868938028769	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACGTCTTGTGCAAATTA	NA	False	NA	17	True	ATTAAA	-18	NA	123366320	123386590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_123366508_123372656_123372760_123377604_123377814_123379894_123379997_123384256_123384346_123386355
ENSMUSG00000029440.16_123366321_123386590_2	chr5	+	918	6	NNC	ENSMUSG00000029440.16	novel	2597	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.0098728008089	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACGTCTTGTGCAAATTA	NA	False	NA	17	True	ATTAAA	-18	NA	123366320	123386590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_123366508_123372663_123372760_123377604_123377814_123379894_123379997_123384256_123384346_123386355
ENSMUSG00000029440.16_123366321_123387025_1	chr5	+	1360	6	FSM	ENSMUSG00000029440.16	ENSMUST00000100729.9	2597	6	68	1169	0	435	multi-exon	FALSE	canonical	3	158	junction_2	18.6868938028769	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTGTCAGTATATTC	NA	False	NA	23	True	NA	NA	NA	123366320	123387025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_123366508_123372656_123372760_123377604_123377814_123379894_123379997_123384256_123384346_123386355
ENSMUSG00000029446.15_129842622_129856237_1	chr5	-	1080	6	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	8276	0	0	0	3prime_fragment	FALSE	canonical	3	674	junction_1	180.962537559573	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGTAGTTTTAAGTGA	NA	False	NA	-2	True	ATTAAA	-22	NA	129856237	129842621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085
ENSMUSG00000029446.15_129842622_129856292_1	chr5	-	1135	6	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	8221	0	-15	0	3prime_fragment	FALSE	canonical	3	674	junction_1	180.962537559573	4910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGTAGTTTTAAGTGA	NA	False	NA	-2	True	ATTAAA	-22	NA	129856292	129842621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085
ENSMUSG00000029446.15_129842622_129856345_1	chr5	-	1188	6	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	8168	0	-68	0	3prime_fragment	FALSE	canonical	3	674	junction_1	180.962537559573	4967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGTAGTTTTAAGTGA	NA	False	NA	-2	True	ATTAAA	-22	NA	129856345	129842621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085
ENSMUSG00000029446.15_129842622_129864218_1	chr5	-	1438	8	FSM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	295	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	460.03695503731	5171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGTAGTTTTAAGTGA	9052	False	NA	-2	True	ATTAAA	-22	NA	129864218	129842621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085_129856313_129856425_129856509_129864018
ENSMUSG00000029446.15_129864467_129875212_1	chr5	-	2183	14	NIC	ENSMUSG00000029446.15	novel	1733	8	NA	NA	-10699	-8022	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	13122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTGCGGGGTCTTCTC	3854	False	NA	NA	False	NA	NA	NA	129875212	129864466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ENSMUSG00000029447.14_129864467_129874921_1	chr5	+	1892	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	405	291	405	-291	multi-exon	FALSE	canonical	3	3618	junction_3	465.957308149311	3017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTTCCGTAAGTGTTC	NA	False	NA	26	True	NA	NA	NA	129864466	129874921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ENSMUSG00000029447.14_129864467_129875212_1	chr5	+	2174	14	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	405	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1199.66729115512	12169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTTGAAATGACTGAAA	NA	False	NA	38	True	AATAAA	-30	NA	129864466	129875212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868541_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ENSMUSG00000029447.14_129864467_129875212_2	chr5	+	2161	14	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	405	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_7	1203.25670504047	11672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTTGAAATGACTGAAA	NA	False	NA	38	True	AATAAA	-30	NA	129864466	129875212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869104_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ENSMUSG00000029447.14_129864467_129875212_3	chr5	+	2178	14	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	405	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1206.97024470267	12232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTTGAAATGACTGAAA	NA	False	NA	38	True	AATAAA	-30	NA	129864466	129875212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868850_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ENSMUSG00000029454.16_121663115_121683380_1	chr5	-	1632	14	FSM	ENSMUSG00000029454.16	ENSMUST00000031410.14	2234	14	588	14	-86	0	multi-exon	FALSE	canonical	0	0	junction_9	50.8494703910793	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGCTTAAAGTTGCTA	NA	False	NA	-10	True	AATAAA	-16	NA	121683380	121663114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227
ENSMUSG00000029455.15_121705769_121731653_1	chr5	-	1954	13	FSM	ENSMUSG00000029455.15	ENSMUST00000031411.15	3867	13	234	1679	-8	172	multi-exon	TRUE	canonical	3	476	junction_10	93.9036148872283	2075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACGGGGTCAGTTCTCTA	NA	False	NA	-26	True	AATAAA	-16	NA	121731653	121705768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_121706087_121706988_121707104_121708666_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
ENSMUSG00000029455.15_121705769_121731653_2	chr5	-	1945	13	NNC	ENSMUSG00000029455.15	novel	3867	13	NA	NA	-8	172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	198.762840256087	2069	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACGGGGTCAGTTCTCTA	NA	False	NA	-26	True	AATAAA	-16	NA	121731653	121705768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_121706087_121706988_121707104_121708666_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716477_121717666_121717808_121718676_121718782_121731424
ENSMUSG00000029455.15_121705769_121731653_3	chr5	-	858	5	NNC	ENSMUSG00000029455.15	novel	623	5	NA	NA	-8	172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	332.71562557235	622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACGGGGTCAGTTCTCTA	NA	False	NA	-26	True	AATAAA	-16	NA	121731653	121705768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_121706087_121706988_121707104_121708666_121708825_121710079_121710245_121731551
ENSMUSG00000029462.19_122492469_122501060_1	chr5	+	702	4	NNC	ENSMUSG00000029462.19	novel	2716	4	NA	NA	0	-214	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1045.8626423516	3097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTTGTATCACTTTTAT	716	False	NA	14	True	ATTAAA	-14	NA	122492468	122501060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_122492550_122498075_122498268_122500098_122500335_122500867
ENSMUSG00000029462.19_122492469_122501350_3	chr5	+	992	4	NNC	ENSMUSG00000029462.19	novel	2716	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1045.8626423516	6733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTTGAAAACCTGTG	716	False	NA	18	True	AATAAA	-18	NA	122492468	122501350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_122492550_122498075_122498268_122500098_122500335_122500867
ENSMUSG00000029464.11_122510590_122520965_1	chr5	+	1600	7	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	76	0	0	0	intron_retention	FALSE	canonical	3	424	junction_4	38.3608596821755	1753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGAGGTTTGTAAA	8115	False	NA	NA	False	AATAAA	-42	NA	122510589	122520965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110
ENSMUSG00000029466.12_122560544_122576462_1	chr5	+	1185	7	ISM	ENSMUSG00000029466.12	ENSMUST00000119792.2	3599	10	0	5035	0	-2086	5prime_fragment	FALSE	canonical	3	232	junction_6	26.8416136292553	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTGATCATGTATACAGA	NA	False	NA	NA	False	NA	NA	NA	122560543	122576462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191
ENSMUSG00000029466.12_122560544_122579866_1	chr5	+	1968	10	FSM	ENSMUSG00000029466.12	ENSMUST00000119792.2	3599	10	0	1631	0	0	multi-exon	FALSE	canonical	3	226	junction_7	31.1071426040332	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCTTTTACCTGTCATC	NA	False	NA	NA	False	ATTAAA	-23	NA	122560543	122579866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352
ENSMUSG00000029468.18_122782072_122819822_1	chr5	+	2308	13	FSM	ENSMUSG00000029468.18	ENSMUST00000100737.10	4936	13	98	2530	0	386	multi-exon	FALSE	canonical	3	11	junction_11	5.09015935135848	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTTTTTTTCTCTCCTC	NA	False	NA	NA	False	NA	NA	NA	122782071	122819822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_122782262_122790789_122790959_122792223_122792293_122795074_122795148_122796770_122796868_122801639_122801721_122802607_122802738_122804206_122804344_122808500_122808592_122811417_122811484_122811728_122811879_122814724_122814827_122818869
ENSMUSG00000029470.16_122845633_122867107_1	chr5	+	1982	12	FSM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	26	694	0	0	multi-exon	FALSE	canonical	3	87	junction_5	9.63207451716048	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTTGTCTGTGCTGCCT	NA	False	NA	15	True	ATTAAA	-20	NA	122845632	122867107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
ENSMUSG00000029472.14_122925790_122959343_1	chr5	-	2428	17	NNC	ENSMUSG00000029472.14	novel	2413	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	565.323189506454	1512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959343	122925789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952674_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUSG00000029472.14_122925790_122959343_2	chr5	-	2433	17	FSM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	59	268	0	0	multi-exon	FALSE	canonical	3	1165	junction_8	284.126264845403	1852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959343	122925789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUSG00000029474.8_122988220_123006336_1	chr5	+	1313	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	109	3018	0	-3018	multi-exon	FALSE	canonical	3	187	junction_1	16.3389106124001	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAGTGCACTAGAGGGA	623	False	NA	NA	False	NA	NA	NA	122988219	123006336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
ENSMUSG00000029474.8_122988220_123007008_1	chr5	+	1766	5	NIC	ENSMUSG00000029474.8	novel	4440	6	NA	NA	0	-2346	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	85.4005269304587	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	623	False	NA	9	True	AATAAA	-16	NA	122988219	123007008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_122988362_123002049_123002458_123004864_123004970_123005182_123005385_123006099
ENSMUSG00000029474.8_122988220_123007008_2	chr5	+	1985	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	109	2346	0	-2346	multi-exon	FALSE	canonical	3	187	junction_1	16.3389106124001	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	623	False	NA	9	True	AATAAA	-16	NA	122988219	123007008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
ENSMUSG00000029475.18_123008728_123060170_1	chr5	-	3618	13	NIC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	58	junction_12	99.7441170640599	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTGTTTGAGGGTTTC	NA	False	NA	NA	False	TATAAA	-24	NA	123060170	123008727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059967
ENSMUSG00000029484.13_96941363_96993719_1	chr5	+	1370	13	FSM	ENSMUSG00000029484.13	ENSMUST00000031447.12	1595	13	119	106	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.64991582276861	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCCTTTCCTAATTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	96941362	96993719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_96941423_96945259_96945313_96958908_96958997_96960700_96960796_96964199_96964314_96968260_96968352_96972745_96972826_96976206_96976264_96976555_96976650_96978251_96978348_96982633_96982693_96986151_96986275_96993359
ENSMUSG00000029486.14_96358003_96412275_1	chr5	+	1102	9	NNC	ENSMUSG00000029486.14	novel	3431	9	NA	NA	0	-2293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	239.064812080323	2200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCTCCTCATGTTTTC	NA	False	NA	22	True	TATAAA	-16	NA	96358002	96412275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_96358053_96361645_96361770_96371629_96371892_96374150_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ENSMUSG00000029486.14_96358003_96412275_2	chr5	+	1109	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	29	2293	0	-2293	multi-exon	FALSE	canonical	3	666	junction_1	44.6738178355063	2337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCTCCTCATGTTTTC	NA	False	NA	22	True	TATAAA	-16	NA	96358002	96412275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ENSMUSG00000029486.14_96358003_96412275_3	chr5	+	985	8	NIC	ENSMUSG00000029486.14	novel	3431	9	NA	NA	0	-2293	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	252.613684248078	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCTCCTCATGTTTTC	NA	False	NA	22	True	TATAAA	-16	NA	96358002	96412275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_96358053_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ENSMUSG00000029499.12_110422161_110433887_1	chr5	-	863	5	FSM	ENSMUSG00000029499.12	ENSMUST00000031472.12	1041	5	165	13	0	0	multi-exon	FALSE	canonical	3	476	junction_4	29.6004645233821	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTAATGGGTGTGGTT	NA	False	NA	-9	True	AATAAA	-15	NA	110433887	110422160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_110422495_110425520_110425641_110429062_110429226_110431511_110431620_110433749
ENSMUSG00000029502.15_110324745_110371067_1	chr5	+	4685	24	FSM	ENSMUSG00000029502.15	ENSMUST00000112512.8	8132	24	178	3269	0	0	multi-exon	FALSE	canonical	3	40	junction_3	20.4320997313759	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCTTTACTTTTTATC	NA	False	NA	80	True	AAGAAA	-11	NA	110324744	110371067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_110324789_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ENSMUSG00000029504.6_110801317_110806062_1	chr5	+	2546	15	FSM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	0	2300	0	325	multi-exon	TRUE	canonical	3	94	junction_7	18.2382195693885	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAAATTCCCGATAGCT	NA	False	NA	5	True	AATAAA	-16	NA	110801316	110806062	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ENSMUSG00000029505.18_110887164_110918451_1	chr5	-	2047	5	FSM	ENSMUSG00000029505.18	ENSMUST00000146458.9	3673	5	0	1626	0	-1228	multi-exon	FALSE	canonical	3	52	junction_3	2.77263412660235	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTACTCTGTGGACATTGG	NA	False	NA	NA	False	NA	NA	NA	110918451	110887163	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
ENSMUSG00000029505.18_110887286_110918451_1	chr5	-	1925	5	FSM	ENSMUSG00000029505.18	ENSMUST00000146458.9	3673	5	0	1748	0	-1350	multi-exon	FALSE	canonical	3	52	junction_3	2.77263412660235	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCTGCCCCCCTGCCCA	NA	False	NA	NA	False	NA	NA	NA	110918451	110887285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
ENSMUSG00000029505.18_110903829_110918583_1	chr5	-	1030	2	ISM	ENSMUSG00000029505.18	ENSMUST00000146458.9	3673	5	-132	18291	0	469	5prime_fragment	FALSE	canonical	3	53	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCACCACGGCCAGCCTG	NA	False	NA	NA	False	NA	NA	NA	110918583	110903828	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_110904633_110918357
ENSMUSG00000029507.17_110921533_110928481_1	chr5	-	1373	5	NIC	ENSMUSG00000029507.17	novel	1510	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	246.215733656483	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCCTATTTTCCTTT	NA	False	NA	1	True	ATTAAA	-22	NA	110928481	110921532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_110921846_110922387_110923080_110923401_110923505_110927552_110927764_110928427
ENSMUSG00000029507.17_110921533_110928481_3	chr5	-	1565	7	NIC	ENSMUSG00000029507.17	novel	1868	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	232.058481613771	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCCTATTTTCCTTT	NA	False	NA	1	True	ATTAAA	-22	NA	110928481	110921532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_110921846_110922387_110923080_110923401_110923505_110924419_110924474_110925479_110925618_110927552_110927764_110928427
ENSMUSG00000029518.16_115778220_115785217_1	chr5	+	1819	4	ISM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	8253	578	8020	-578	3prime_fragment	FALSE	canonical	3	206	junction_3	15.1730755689881	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCTCCACTTGTCCA	NA	False	NA	17	True	AATAAA	-19	NA	115778219	115785217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_115778263_115781426_115781552_115781633_115781759_115783691
ENSMUSG00000029521.8_110987866_110997759_1	chr5	+	1776	4	ISM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	0	24252	0	0	intron_retention	FALSE	canonical	3	120	junction_1	91.2249965744039	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTTGGTTTCTCTGA	9199	False	NA	NA	False	AATAAA	-43	NA	110987865	110997759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495
ENSMUSG00000029521.8_110987866_110997759_2	chr5	+	958	5	ISM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	0	24252	0	0	5prime_fragment	FALSE	canonical	3	120	junction_1	80.3632378640881	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTTGGTTTCTCTGA	9199	False	NA	NA	False	AATAAA	-43	NA	110987865	110997759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461
ENSMUSG00000029521.8_110987866_111022011_1	chr5	+	2263	15	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	70.3509061775326	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTGTTGTGGCTTTTC	9199	False	NA	31	True	AAAACA	-7	NA	110987865	111022011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_110987915_110989084_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
ENSMUSG00000029521.8_110987866_111022011_2	chr5	+	2160	14	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_11	68.5178679240099	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTGTTGTGGCTTTTC	9199	False	NA	31	True	AAAACA	-7	NA	110987865	111022011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111015873_111015960_111019892_111019974_111021345
ENSMUSG00000029521.8_110987866_111022011_3	chr5	+	2406	16	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	67.6591457232502	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTGTTGTGGCTTTTC	9199	False	NA	31	True	AAAACA	-7	NA	110987865	111022011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
ENSMUSG00000029522.13_115603166_115612781_1	chr5	+	634	4	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1155	0	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_2	947.073738769409	1306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGATTGTTATCTC	NA	False	NA	30	True	AATAAA	-21	NA	115603165	115612781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_115603279_115604200_115604380_115610051_115610180_115612567
ENSMUSG00000029522.13_115603166_115612781_2	chr5	+	794	5	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1155	0	at_least_one_novel_splicesite	FALSE	canonical	3	2118	junction_4	157.856540884437	5814	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGATTGTTATCTC	NA	False	NA	30	True	AATAAA	-21	NA	115603165	115612781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_115603279_115604200_115604380_115608840_115609001_115610051_115610180_115612567
ENSMUSG00000029524.17_115616069_115622425_1	chr5	-	1435	5	FSM	ENSMUSG00000029524.17	ENSMUST00000112066.2	1794	5	359	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	4.96865172858795	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTGTGGACTGTGAAC	9379	False	NA	NA	False	AATAAA	-19	NA	115622425	115616068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_115616468_115617660_115617872_115618289_115618585_115620682_115621178_115622390
ENSMUSG00000029536.9_115472140_115479237_1	chr5	-	955	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	0	842	0	-842	multi-exon	FALSE	canonical	3	122	junction_1	3.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAACCATCTTTCTTTC	9709	False	NA	NA	False	AGTAAA	-21	NA	115479237	115472139	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_115472654_115473525_115473630_115478900
ENSMUSG00000029536.9_115472345_115479237_1	chr5	-	750	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	0	1047	0	-1047	multi-exon	FALSE	canonical	3	122	junction_1	3.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGGACTTTTCTGTT	9709	False	NA	NA	False	AAAACA	-17	NA	115479237	115472344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_115472654_115473525_115473630_115478900
ENSMUSG00000029538.15_115465454_115471139_1	chr5	+	944	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	218	0	0	0	multi-exon	FALSE	canonical	3	1733	junction_1	69.0700127889569	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCGTGCAGTTGTCTTTG	352	False	NA	39	True	AATATA	-18	NA	115465453	115471139	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
ENSMUSG00000029545.14_115248358_115257372_1	chr5	-	1892	11	NNC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	171.377244697188	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	9807	False	NA	-4	True	AATAAA	-18	NA	115257372	115248357	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115256835_115256891_115257283
ENSMUSG00000029552.20_17065148_17104896_1	chr6	+	1514	7	FSM	ENSMUSG00000029552.20	ENSMUST00000115467.11	2440	7	0	926	0	-926	multi-exon	FALSE	canonical	3	87	junction_1	5.93717104351896	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTCTAATATTTTTT	-34	True	NA	NA	False	AATAAA	-7	NA	17065147	17104896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17104591
ENSMUSG00000029554.16_139994740_140307307_1	chr5	-	2344	18	FSM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	0	296	0	-291	multi-exon	FALSE	canonical	3	167	junction_17	17.902078903461	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCACCCATAGCTGCAT	NA	False	NA	NA	False	NA	NA	NA	140307307	139994739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ENSMUSG00000029559.16_115080263_115086608_1	chr5	+	1327	6	FSM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	46	1234	0	765	multi-exon	FALSE	canonical	3	243	junction_3	24.1909073827337	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCCTGGTCAGTGCT	NA	False	NA	26	True	AATAAA	-28	NA	115080262	115086608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084424_115085221_115085313_115085740
ENSMUSG00000029559.16_115087039_115111383_1	chr5	+	2778	10	NNC	ENSMUSG00000029559.16	novel	2607	6	NA	NA	3175	23541	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGAGAGCCAAGCATGT	4769	False	NA	NA	False	NA	NA	NA	115087038	115111383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_115088245_115088752_115088898_115088984_115089104_115090637_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115111247
ENSMUSG00000029560.13_140327231_140374996_1	chr5	-	1433	11	FSM	ENSMUSG00000029560.13	ENSMUST00000031539.12	2627	11	21	1173	0	-530	multi-exon	FALSE	canonical	3	173	junction_10	18.7160359050735	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGTTCCTGGCTGATT	7741	False	NA	-6	True	ACTAAA	-14	NA	140374996	140327230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
ENSMUSG00000029575.18_114569095_114582082_1	chr5	-	1083	10	NNC	ENSMUSG00000029575.18	novel	3020	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	10	junction_1	60.6577119968381	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGTGGCTCATCTCTC	NA	False	NA	2	True	AATAAA	-36	NA	114582082	114569094	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_114569246_114571143_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ENSMUSG00000029575.18_114571073_114582082_1	chr5	-	1003	9	FSM	ENSMUSG00000029575.18	ENSMUST00000031560.14	3020	9	39	1978	0	188	multi-exon	FALSE	canonical	3	162	junction_1	19.5604032422647	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGGGCTTTCTGTGTGT	NA	False	NA	0	True	AATGAA	-23	NA	114582082	114571072	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ENSMUSG00000029581.15_142946098_142957925_1	chr5	+	1660	5	FSM	ENSMUSG00000029581.15	ENSMUST00000031565.15	2675	5	0	1015	0	0	multi-exon	FALSE	canonical	3	2634	junction_2	132.012310032057	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGCAAACCCCTTGCCT	NA	False	NA	NA	False	NA	NA	NA	142946097	142957925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957650
ENSMUSG00000029581.15_142946098_142958248_1	chr5	+	1983	5	FSM	ENSMUSG00000029581.15	ENSMUST00000031565.15	2675	5	0	692	0	323	multi-exon	FALSE	canonical	3	2634	junction_2	132.012310032057	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCTCTGGCCCCAGCC	NA	False	NA	NA	False	NA	NA	NA	142946097	142958248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957650
ENSMUSG00000029591.15_114269290_114277384_1	chr5	+	1833	6	NNC	ENSMUSG00000029591.15	novel	1985	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	288.077350723725	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCCGACTATTCTTCA	NA	False	NA	23	True	AATAAA	-19	NA	114269289	114277384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_114269575_114270241_114270342_114273930_114274023_114274407_114274497_114275213_114275393_114276296
ENSMUSG00000029592.12_114257568_114260249_1	chr5	+	1230	5	ISM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	19192	2532	8379	1092	3prime_fragment	FALSE	canonical	3	48	junction_2	4.9180788932265	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTTTGTTTCCCATTGT	9293	False	NA	NA	False	ATTAAA	-22	NA	114257567	114260249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ENSMUSG00000029600.11_120740170_120750635_1	chr5	-	1100	4	NIC	ENSMUSG00000029600.11	novel	712	3	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	6	junction_2	29.8923996285938	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTCAGTCCTGATACT	6334	False	NA	-4	True	NA	NA	NA	120750635	120740169	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_120740583_120742274_120742313_120749442_120749795_120750338
ENSMUSG00000029601.14_120740170_120745048_1	chr5	+	843	2	NNC	ENSMUSG00000029601.14	novel	1673	5	NA	NA	13082	-131	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCACATCCTGGTCTGGCC	5138	False	NA	NA	False	NA	NA	NA	120740169	120745048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_120740583_120744618
ENSMUSG00000029602.12_120812841_120817662_1	chr5	+	1342	6	NNC	ENSMUSG00000029602.12	novel	486	2	NA	NA	-3817	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	10.6282642044691	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGTGACGTGTTAAAATCG	162	False	NA	11	True	TATAAA	-21	NA	120812840	120817662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_120813041_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
ENSMUSG00000029603.16_120818268_120821521_1	chr5	-	1905	6	ISM	ENSMUSG00000029603.16	ENSMUST00000145174.8	2961	8	11947	0	-541	0	3prime_fragment	FALSE	canonical	3	95	junction_3	14.7051011557214	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	-19	True	AATAAA	-15	NA	120821521	120818267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359
ENSMUSG00000029603.16_120818268_120832662_1	chr5	-	2155	8	FSM	ENSMUSG00000029603.16	ENSMUST00000145174.8	2961	8	806	0	806	0	multi-exon	FALSE	canonical	3	45	junction_7	31.3453443472057	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	-19	True	AATAAA	-15	NA	120832662	120818267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359_120821522_120821751_120821814_120832474
ENSMUSG00000029613.16_143803586_143839408_1	chr5	+	2621	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	43	1661	0	-1661	multi-exon	FALSE	canonical	3	166	junction_1	19.8185647866863	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAAGTCCTCAGATAGC	NA	False	NA	NA	False	NA	NA	NA	143803585	143839408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ENSMUSG00000029613.16_143803586_143839535_1	chr5	+	2748	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	43	1534	0	-1534	multi-exon	FALSE	canonical	3	166	junction_1	19.8185647866863	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGGACAAGTCCCTT	NA	False	NA	20	True	AATAAA	-25	NA	143803585	143839535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ENSMUSG00000029613.16_143839522_143846657_1	chr5	+	1177	4	NNC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	35820	5588	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTTCATTGGCCGGGCT	NA	False	NA	NA	False	AATGAA	-7	NA	143839521	143846657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_143840001_143841382_143841615_143843366_143843574_143846398
ENSMUSG00000029614.14_121342609_121347029_1	chr5	+	930	7	FSM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	65	275	0	0	multi-exon	FALSE	canonical	3	7748	junction_1	3319.97705815367	142299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTCCTTTTTGTG	NA	False	NA	1	True	ATTAAA	-15	NA	121342608	121347029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ENSMUSG00000029614.14_121342609_121347029_2	chr5	+	921	7	NNC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	6219.88043829354	137481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTCCTTTTTGTG	NA	False	NA	1	True	ATTAAA	-15	NA	121342608	121347029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346853
ENSMUSG00000029616.10_121582819_121590429_1	chr5	-	1132	3	FSM	ENSMUSG00000029616.10	ENSMUST00000130451.2	5204	3	140	3932	-18	0	multi-exon	FALSE	canonical	3	820	junction_1	20.5	5185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGGTTTTCTTTTTAG	3352	False	NA	-41	True	AATAAA	-14	NA	121590429	121582818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_121583636_121585203_121585343_121590253
ENSMUSG00000029616.10_121583304_121590550_1	chr5	-	768	3	FSM	ENSMUSG00000029616.10	ENSMUST00000130451.2	5204	3	19	4417	0	0	multi-exon	FALSE	canonical	3	820	junction_1	20.5	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGGAAGATCCTGGACCA	3231	False	NA	NA	False	NA	NA	NA	121590550	121583303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_121583636_121585203_121585343_121590253
ENSMUSG00000029617.11_143924888_143951671_1	chr5	-	1608	15	FSM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	0	161	0	-161	multi-exon	FALSE	canonical	3	726	junction_9	71.895615943093	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTACTTGGTCTGATG	NA	False	NA	-31	True	AGTAAA	-23	NA	143951671	143924887	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
ENSMUSG00000029621.15_145020694_145045571_1	chr5	+	1572	10	NNC	ENSMUSG00000029621.15	novel	1632	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	120.47590814949	2069	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTTTCTTTATACTCT	NA	False	NA	22	True	ATTAAA	-23	NA	145020693	145045571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_145020783_145027962_145028051_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045186
ENSMUSG00000029622.17_145051025_145064996_1	chr5	+	1570	11	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	0	98	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	556.029819344251	3857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCACTCG	8032	False	NA	29	True	AATAAA	-15	NA	145051024	145064996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630_145064857_145064878
ENSMUSG00000029622.17_145051025_145064996_2	chr5	+	1586	10	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	0	98	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	583.629787104001	6858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCACTCG	8032	False	NA	29	True	AATAAA	-15	NA	145051024	145064996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_145051152_145058472_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUSG00000029622.17_145051025_145064996_3	chr5	+	1586	10	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	0	98	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	574.295080517127	6452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCACTCG	8032	False	NA	29	True	AATAAA	-15	NA	145051024	145064996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_145051152_145058466_145058544_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUSG00000029622.17_145051111_145064913_1	chr5	+	1417	10	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	0	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	583.629787104001	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACAAGAAACAAAAAC	8118	False	NA	-54	True	NA	NA	NA	145051110	145064913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_145051152_145058472_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUSG00000029622.17_145066464_145076832_1	chr5	+	1246	6	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	2431	9317	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1938	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACCGGAACCGGAAACTC	NA	False	NA	NA	False	NA	NA	NA	145066463	145076832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_145067180_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
ENSMUSG00000029622.17_145066464_145076832_2	chr5	+	481	6	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	2431	9317	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACCGGAACCGGAAACTC	NA	False	NA	NA	False	NA	NA	NA	145066463	145076832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_145066524_145068283_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
ENSMUSG00000029622.17_145066464_145076832_3	chr5	+	1252	6	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	2431	9317	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACCGGAACCGGAAACTC	NA	False	NA	NA	False	NA	NA	NA	145066463	145076832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
ENSMUSG00000029623.15_145051111_145066509_1	chr5	-	3019	10	NIC	ENSMUSG00000029623.15	novel	2353	6	NA	NA	5773	14468	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	4554	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACCGGCTCTGAGACCCG	NA	False	NA	NA	False	NA	NA	NA	145066509	145051110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUSG00000029623.15_145066464_145076832_1	chr5	-	212	3	NNC	ENSMUSG00000029623.15	novel	448	2	NA	NA	-24	430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	207.5	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTTTGGCAGTTTCT	NA	False	NA	-22	True	ATTAAA	-15	NA	145076832	145066463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_145066524_145073707_145073804_145076776
ENSMUSG00000029623.15_145066464_145076832_2	chr5	-	1244	6	NNC	ENSMUSG00000029623.15	novel	2353	6	NA	NA	-24	430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	192.739617100377	2225	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTTTGGCAGTTTCT	NA	False	NA	-22	True	ATTAAA	-15	NA	145076832	145066463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073796_145076776
ENSMUSG00000029623.15_145066464_145076832_4	chr5	-	1247	6	NNC	ENSMUSG00000029623.15	novel	2353	6	NA	NA	-24	430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	185.721727323434	2021	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTTTGGCAGTTTCT	NA	False	NA	-22	True	ATTAAA	-15	NA	145076832	145066463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_145067186_145068174_145068322_145069668_145069791_145071874_145071983_145073711_145073804_145076776
ENSMUSG00000029623.15_145066464_145076832_5	chr5	-	1248	6	NNC	ENSMUSG00000029623.15	novel	2353	6	NA	NA	-24	430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	192.739617100377	1991	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTTTGGCAGTTTCT	NA	False	NA	-22	True	ATTAAA	-15	NA	145076832	145066463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073792_145076768
ENSMUSG00000029624.11_145077172_145084884_1	chr5	-	1008	7	NNC	ENSMUSG00000029624.11	novel	3087	9	NA	NA	18882	7152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1835	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGGGCCCCGCCCACCTCG	NA	False	NA	NA	False	NA	NA	NA	145084884	145077171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_145077253_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145083762_145083908_145084644
ENSMUSG00000029624.11_145077218_145084884_1	chr5	-	832	6	NNC	ENSMUSG00000029624.11	novel	3087	9	NA	NA	18882	7106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACGGCTTCCGCTCCGGC	NA	False	NA	NA	False	NA	NA	NA	145084884	145077217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_145077253_145078114_145078247_145079242_145079378_145081708_145081832_145083252_145083420_145084644
ENSMUSG00000029624.11_145077218_145084884_2	chr5	-	817	6	NIC	ENSMUSG00000029624.11	novel	3087	9	NA	NA	18882	7106	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	4258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACGGCTTCCGCTCCGGC	NA	False	NA	NA	False	NA	NA	NA	145084884	145077217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_145077253_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ENSMUSG00000029624.11_145084324_145103766_1	chr5	-	2935	9	FSM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	152	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	16.4350045634311	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTGCGTCTCATATATA	NA	False	NA	2	True	AATAAA	-30	NA	145103766	145084323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_145085316_145088095_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101870_145102344_145103763
ENSMUSG00000029625.17_145104057_145118851_1	chr5	+	816	2	NNC	ENSMUSG00000029625.17	novel	1606	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	23	True	ATTAAA	-15	NA	145104056	145118851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_145104141_145118119
ENSMUSG00000029625.17_145104078_145118851_1	chr5	+	1658	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160629.8	1713	8	55	0	0	0	multi-exon	FALSE	canonical	3	267	junction_6	186.36939400129	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	23	True	ATTAAA	-15	NA	145104077	145118851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
ENSMUSG00000029634.16_146146002_146158247_1	chr5	-	3334	5	FSM	ENSMUSG00000029634.16	ENSMUST00000161859.8	3452	5	118	0	-19	0	multi-exon	FALSE	canonical	3	59	junction_4	27.6348964173923	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTGCAAACTTATTTC	2299	False	NA	NA	False	ATTAAA	-28	NA	146158247	146146001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146158029
ENSMUSG00000029635.16_146168040_146239684_2	chr5	+	2545	13	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	32.5016025245936	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146168039	146239684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_146168145_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ENSMUSG00000029636.12_146322087_146407329_1	chr5	+	1808	10	FSM	ENSMUSG00000029636.12	ENSMUST00000016143.9	5196	10	292	3096	292	2263	multi-exon	FALSE	canonical	3	97	junction_1	19.5037191768236	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTTCTGGATTTGTTGA	NA	False	NA	10	True	NA	NA	NA	146322086	146407329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
ENSMUSG00000029642.12_147014374_147015896_1	chr5	+	682	2	FSM	ENSMUSG00000029642.12	ENSMUST00000050970.4	1196	2	514	0	0	0	multi-exon	FALSE	canonical	3	451	junction_1	0	6441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGAGTGGTTTCTCTTC	NA	False	NA	22	True	NA	NA	NA	147014373	147015896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_147014504_147015344
ENSMUSG00000029642.12_147014374_147048171_1	chr5	+	915	3	FSM	ENSMUSG00000029642.12	ENSMUST00000200993.2	1167	3	16	236	0	0	multi-exon	FALSE	canonical	0	0	junction_2	200	2253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCCTCTTTTGGGTGT	NA	False	NA	16	True	AATAAA	-17	NA	147014373	147048171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_147014504_147038038_147038110_147047457
ENSMUSG00000029649.11_147797438_147812589_1	chr5	+	735	6	FSM	ENSMUSG00000029649.11	ENSMUST00000031654.10	1579	6	167	677	0	168	multi-exon	FALSE	canonical	3	2983	junction_1	193.876661823954	10266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCATGTGTGTGGTTGGG	NA	False	NA	31	True	AATAAA	-21	NA	147797437	147812589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_147797502_147799362_147799461_147805532_147805594_147806221_147806324_147809375_147809470_147812273
ENSMUSG00000029649.11_147797438_147812589_2	chr5	+	729	6	NNC	ENSMUSG00000029649.11	novel	1579	6	NA	NA	0	168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1295.8027010313	10239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCATGTGTGTGGTTGGG	NA	False	NA	31	True	AATAAA	-21	NA	147797437	147812589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_147797502_147799362_147799461_147805532_147805594_147806227_147806324_147809375_147809470_147812273
ENSMUSG00000029651.17_148239984_148250270_1	chr5	+	469	4	FSM	ENSMUSG00000029651.17	ENSMUST00000085554.5	1009	4	0	540	0	0	multi-exon	FALSE	canonical	3	48	junction_1	28.87136220471	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCCTCCTCTGGA	NA	False	NA	15	True	ATTAAA	-23	NA	148239983	148250270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_148240080_148240292_148240413_148243439_148243538_148250115
ENSMUSG00000029651.17_148239984_148250270_2	chr5	+	682	3	ISM	ENSMUSG00000029651.17	ENSMUST00000146425.2	1131	8	37882	92	0	0	3prime_fragment	FALSE	canonical	3	103	junction_2	5.5	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCCTCCTCTGGA	NA	False	NA	15	True	ATTAAA	-23	NA	148239983	148250270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_148240413_148243439_148243538_148250115
ENSMUSG00000029655.18_150548853_150572310_1	chr5	-	191	2	NNC	ENSMUSG00000029655.18	novel	3842	3	NA	NA	-584	10584	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	22963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTTGACTTTTAAATT	NA	False	NA	NA	False	NA	NA	NA	150572310	150548852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_150548903_150572169
ENSMUSG00000029655.18_150566465_150589053_1	chr5	-	1930	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	24	7028	-11	0	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTTGTTTAGATCCTAA	5461	False	NA	11	True	AATAAA	-32	NA	150589053	150566464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
ENSMUSG00000029655.18_150566465_150589053_2	chr5	-	1880	6	NNC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_3	96.6821596779882	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTTGTTTAGATCCTAA	5461	False	NA	11	True	AATAAA	-32	NA	150589053	150566464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_150566781_150570465_150570543_150570924_150571014_150574129_150574205_150584743_150585979_150588965
ENSMUSG00000029655.18_150572117_150574701_1	chr5	-	196	2	NNC	ENSMUSG00000029655.18	novel	3842	3	NA	NA	-2975	-442	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	2415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATTTTTCTGAAATTAA	9096	False	NA	NA	False	NA	NA	NA	150574701	150572116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_150572266_150574654
ENSMUSG00000029655.18_150572117_150574701_2	chr5	-	195	2	NNC	ENSMUSG00000029655.18	novel	3842	3	NA	NA	-2975	-442	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATTTTTCTGAAATTAA	9096	False	NA	NA	False	NA	NA	NA	150574701	150572116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_150572235_150574624
ENSMUSG00000029657.16_149540310_149559706_2	chr5	-	3404	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	97	301	-32	0	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559706	149540309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ENSMUSG00000029657.16_149540310_149559803_1	chr5	-	3341	19	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	169	junction_18	290.373753405274	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559803	149540309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434_149559625_149559784
ENSMUSG00000029657.16_149541132_149559706_1	chr5	-	2582	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	97	1123	-32	-212	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCGAGTCACCTAAAC	NA	False	NA	-42	True	NA	NA	NA	149559706	149541131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ENSMUSG00000029658.18_149520895_149535363_1	chr5	+	854	4	ISM	ENSMUSG00000029658.18	ENSMUST00000202902.2	2574	23	67697	-4	15652	4	3prime_fragment	FALSE	canonical	1	2	junction_1	0.816496580927726	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGATTCTCGCTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	149520894	149535363	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_149521054_149522668_149522863_149529753_149529852_149534960
ENSMUSG00000029658.18_149533791_149535363_1	chr5	+	464	2	NNC	ENSMUSG00000029658.18	novel	2482	23	NA	NA	28548	4	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	0	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGATTCTCGCTGTTCTTT	5121	False	NA	NA	False	NA	NA	NA	149533790	149535363	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_149533852_149534960
ENSMUSG00000029672.17_22307881_22356109_1	chr6	-	1408	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	56	1362	-12	0	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAGATTTGTGAAAAGCA	12	True	NA	-21	True	AATAAA	-21	NA	22356109	22307880	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
ENSMUSG00000029676.16_25743944_25809194_1	chr6	-	2865	17	NIC	ENSMUSG00000029676.16	novel	3151	18	NA	NA	0	-208	combination_of_known_junctions	FALSE	canonical	3	22	junction_14	31.693847983481	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTGTGTCTGTGTGT	4	True	NA	-6	True	AATAAA	-14	NA	25809194	25743943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25800282_25800510_25805873_25805941_25809173
ENSMUSG00000029676.16_25743944_25809194_2	chr6	-	2912	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	31	208	0	-208	multi-exon	FALSE	canonical	3	94	junction_8	16.939542404853	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTGTGTCTGTGTGT	4	True	NA	-6	True	AATAAA	-14	NA	25809194	25743943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
ENSMUSG00000029681.13_135197266_135210685_1	chr5	+	1605	6	FSM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	129	24	0	0	multi-exon	FALSE	canonical	3	254	junction_5	29.6445610525776	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAAATATGTCTTGTT	8798	False	NA	5	True	AATAGA	-17	NA	135197265	135210685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135197453_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
ENSMUSG00000029681.13_135197266_135210709_1	chr5	+	1629	6	FSM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	129	0	0	0	multi-exon	FALSE	canonical	3	254	junction_5	29.6445610525776	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACAGCTTCTTTCTACA	8798	False	NA	29	True	ATTAAA	-24	NA	135197265	135210709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135197453_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
ENSMUSG00000029681.13_135197734_135202302_1	chr5	+	583	3	NNC	ENSMUSG00000029681.13	novel	1758	6	NA	NA	435	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	41	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAAAGTGTCTATTTTTG	9266	False	NA	NA	False	AAAACA	-3	NA	135197733	135202302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_135197963_135199940_135200017_135202024
ENSMUSG00000029686.16_47430838_47462111_1	chr6	+	560	2	ISM	ENSMUSG00000029686.16	ENSMUST00000152547.6	501	3	412	-212	0	0	3prime_fragment	FALSE	canonical	3	204	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTCTTTTTCAGCAGAG	NA	False	NA	7	True	AATAAA	-18	NA	47430837	47462111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_47430964_47461677
ENSMUSG00000029687.17_47507253_47572309_1	chr6	-	2437	19	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_18	221.487284700388	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTCAAATTTGAATA	NA	False	NA	-58	True	NA	NA	NA	47572309	47507252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47572216
ENSMUSG00000029701.16_29123575_29164671_1	chr6	-	4131	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	334	0	334	0	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	9	True	NA	-4	True	NA	NA	NA	29164671	29123574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ENSMUSG00000029701.16_29125017_29164671_1	chr6	-	2689	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	334	1442	334	124	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCTTTTTAACATTTTT	9	True	NA	-19	True	AATATA	-29	NA	29164671	29125016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ENSMUSG00000029701.16_29125141_29164671_1	chr6	-	2565	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	334	1566	334	0	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGAGAGTACTGAATT	9	True	NA	-79	True	NA	NA	NA	29164671	29125140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ENSMUSG00000029703.11_136145556_136151801_1	chr5	-	563	4	NNC	ENSMUSG00000029703.11	novel	2473	15	NA	NA	2612	6070	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGCCCCGAAGCGCGA	9637	False	NA	NA	False	NA	NA	NA	136151801	136145555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_136145660_136148848_136148939_136150942_136151118_136151607
ENSMUSG00000029703.11_136145556_136151801_2	chr5	-	575	4	NIC	ENSMUSG00000029703.11	novel	2473	15	NA	NA	2612	6070	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	5621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGCCCCGAAGCGCGA	9637	False	NA	NA	False	NA	NA	NA	136151801	136145555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_136145660_136148848_136148939_136150942_136151118_136151595
ENSMUSG00000029703.11_136151921_136164877_1	chr5	-	2127	15	FSM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	51	295	-1	0	multi-exon	FALSE	canonical	3	342	junction_8	23.380722043284	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGTGGGAAATGAGTG	6735	False	NA	-11	True	ATTAAA	-19	NA	136164877	136151920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
ENSMUSG00000029703.11_136151921_136164877_2	chr5	-	2147	15	NNC	ENSMUSG00000029703.11	novel	2473	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	96.2418562682536	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGTGGGAAATGAGTG	6735	False	NA	-11	True	ATTAAA	-19	NA	136164877	136151920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_136152170_136152256_136152387_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
ENSMUSG00000029708.10_28416678_28421723_1	chr6	-	4062	2	FSM	ENSMUSG00000029708.10	ENSMUST00000090511.4	4650	2	0	588	0	-588	multi-exon	FALSE	canonical	3	46	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTTCTTAATGGTG	-13	True	NA	0	True	ATTAAA	-15	NA	28421723	28416677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_28419300_28420283
ENSMUSG00000029713.16_137526393_137527383_1	chr5	-	814	3	ISM	ENSMUSG00000029713.16	ENSMUST00000142252.8	1383	8	1778	-434	-201	0	3prime_fragment	FALSE	canonical	3	706	junction_2	1.5	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCTAGTCTCCTTGCTT	5921	False	NA	-9	True	CATAAA	-18	NA	137527383	137526392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_137526872_137526952_137527170_137527265
ENSMUSG00000029713.16_137526393_137529005_1	chr5	-	1387	9	FSM	ENSMUSG00000029713.16	ENSMUST00000150063.9	1569	9	554	-372	156	0	multi-exon	FALSE	canonical	3	641	junction_6	43.7428565596715	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCTAGTCTCCTTGCTT	4299	False	NA	-9	True	CATAAA	-18	NA	137529005	137526392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137528956
ENSMUSG00000029715.6_137499700_137500687_1	chr5	-	789	2	FSM	ENSMUSG00000029715.6	ENSMUST00000031728.5	881	2	93	-1	0	0	multi-exon	FALSE	canonical	3	320	junction_1	0	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTCGAATGGCCTCT	1732	False	NA	-32	True	AATAAA	-20	NA	137500687	137499699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137500342_137500540
ENSMUSG00000029718.15_137603367_137606932_1	chr5	-	1059	7	ISM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	2706	-3	-478	0	3prime_fragment	FALSE	canonical	3	52	junction_6	194.602729226037	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCGTGTCTGAGGTTCT	6840	False	NA	-4	True	AATAAA	-19	NA	137606932	137603366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137606878
ENSMUSG00000029718.15_137603367_137606962_1	chr5	-	1026	7	NNC	ENSMUSG00000029718.15	novel	1585	10	NA	NA	-508	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	213.178654862275	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCGTGTCTGAGGTTCT	6810	False	NA	-4	True	AATAAA	-19	NA	137606962	137603366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137606941
ENSMUSG00000029723.17_137744396_137758011_1	chr5	+	2186	5	FSM	ENSMUSG00000029723.17	ENSMUST00000100539.10	3983	5	138	1659	138	201	multi-exon	FALSE	canonical	3	319	junction_1	32.7595405950694	380	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGAGGTTGGTGTGCTGT	NA	False	NA	13	True	ATTAAA	-24	NA	137744395	137758011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_137744677_137745109_137746122_137749469_137749631_137756945_137756995_137757328
ENSMUSG00000029729.13_138083346_138100437_1	chr5	+	2614	6	FSM	ENSMUSG00000029729.13	ENSMUST00000019660.11	8261	6	0	5647	0	-2316	multi-exon	FALSE	canonical	2	7	junction_4	2.63818119165458	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTAGAACGCCTAAATGC	NA	False	NA	NA	False	NA	NA	NA	138083345	138100437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138095328_138095421_138095714_138095842_138098851
ENSMUSG00000029730.17_138162862_138170114_1	chr5	-	2375	15	FSM	ENSMUSG00000029730.17	ENSMUST00000000505.16	2962	15	570	17	-34	0	multi-exon	FALSE	canonical	3	1644	junction_12	192.903605514278	6416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2286	False	NA	-25	True	AATAAA	-15	NA	138170114	138162861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ENSMUSG00000029730.17_138162862_138170114_2	chr5	-	2369	15	NNC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-34	0	at_least_one_novel_splicesite	TRUE	canonical	1	29	junction_14	565.543210063546	3938	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2286	False	NA	-25	True	AATAAA	-15	NA	138170114	138162861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168653_138169987
ENSMUSG00000029730.17_138170330_138176949_1	chr5	-	1671	15	Fusion	ENSMUSG00000036980.14_ENSMUSG00000029730.17	novel	2962	15	NA	NA	2781	-2657	intron_retention	FALSE	non_canonical	0	0	junction_1	0	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCATTAATTTCGAACCG	7767	False	NA	NA	False	AAGAAA	-24	NA	138176949	138170329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr5_-_138170511_138170610_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ENSMUSG00000029735.18_43322007_43643131_1	chr6	-	2518	9	FSM	ENSMUSG00000029735.18	ENSMUST00000067888.14	2671	9	81	72	-22	0	multi-exon	FALSE	canonical	3	33	junction_1	3.903123748999	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCATTGTTTCTGTTCA	NA	False	NA	-78	True	NA	NA	NA	43643131	43322006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43642693_43642752_43643069
ENSMUSG00000029767.17_29348118_29375954_1	chr6	+	2496	7	FSM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	0	174	0	-174	multi-exon	FALSE	canonical	3	300	junction_2	301.970979105977	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTTACTAAGATGAATAC	-1	True	NA	NA	False	NA	NA	NA	29348117	29375954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_29348208_29356469_29356697_29361558_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ENSMUSG00000029767.17_29348118_29375954_2	chr6	+	2496	7	FSM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	13	720	0	-174	multi-exon	FALSE	canonical	3	608	junction_2	154.523730647863	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTTACTAAGATGAATAC	-1	True	NA	NA	False	NA	NA	NA	29348117	29375954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ENSMUSG00000029767.17_29348118_29376671_1	chr6	+	3213	7	FSM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	0	-543	0	0	multi-exon	FALSE	canonical	3	300	junction_2	301.970979105977	1833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTATGTGTCTTTTATT	-1	True	NA	115	True	AATAAA	-19	NA	29348117	29376671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_29348208_29356469_29356697_29361558_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ENSMUSG00000029776.12_52523213_52617330_1	chr6	-	1776	8	NNC	ENSMUSG00000029776.12	novel	1825	8	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	363.353204224771	1295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGAGCTTTTTGTTTT	2883	False	NA	-1	True	AATAAA	-20	NA	52617330	52523212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_52524048_52525799_52525957_52533422_52533500_52534763_52534898_52596961_52597079_52599835_52599946_52607173_52607335_52617145
ENSMUSG00000029776.12_52523213_52617330_2	chr6	-	549	4	NNC	ENSMUSG00000029776.12	novel	1825	8	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	503.820294240803	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGAGCTTTTTGTTTT	2883	False	NA	-1	True	AATAAA	-20	NA	52617330	52523212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_52523335_52599864_52599946_52607173_52607335_52617145
ENSMUSG00000029776.12_52523213_52617330_3	chr6	-	1771	8	NNC	ENSMUSG00000029776.12	novel	1825	8	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_7	344.659548078437	1291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGAGCTTTTTGTTTT	2883	False	NA	-1	True	AATAAA	-20	NA	52617330	52523212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_52524048_52525799_52525957_52533422_52533500_52534763_52534898_52596961_52597084_52599835_52599946_52607173_52607325_52617145
ENSMUSG00000029777.11_55027360_55056485_1	chr6	+	1893	14	ISM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	12368	0	280	0	3prime_fragment	FALSE	canonical	0	0	junction_8	814.659590577997	1611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATCTGTTGTGTTTCCAT	NA	False	NA	35	True	ATTAAA	-29	NA	55027359	55056485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045154_55046325_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ENSMUSG00000029781.8_56809044_56855502_1	chr6	+	2168	10	FSM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	0	841	0	-841	multi-exon	FALSE	canonical	3	670	junction_6	57.9369602069757	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGTAGCTGTCATGGA	NA	False	NA	5	True	AATAAA	-17	NA	56809043	56855502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
ENSMUSG00000029782.21_30482414_30509715_1	chr6	-	2231	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	67	1187	0	0	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	3541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTGAAAGGTCAA	4	True	NA	-18	True	ATTAAA	-16	NA	30509715	30482413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ENSMUSG00000029782.21_30482414_30509763_1	chr6	-	2279	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	19	1187	-15	0	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	3557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTGAAAGGTCAA	NA	False	NA	-18	True	ATTAAA	-16	NA	30509763	30482413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ENSMUSG00000029790.17_30655656_30693711_1	chr6	-	1210	11	FSM	ENSMUSG00000029790.17	ENSMUST00000031810.15	3447	11	37	2200	-12	-125	multi-exon	FALSE	canonical	3	75	junction_8	9.18095855561934	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCAGCGCTCCCAACTTG	-4	True	NA	-2	True	AATAAA	-20	NA	30693711	30655655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
ENSMUSG00000029802.14_58572960_58669496_1	chr6	+	2157	16	NIC	ENSMUSG00000029802.14	novel	600	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	43.6165106353087	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACATTATCTGTCACAT	NA	False	NA	76	True	NA	NA	NA	58572959	58669496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_58573003_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ENSMUSG00000029802.14_58573656_58669496_1	chr6	+	2552	16	FSM	ENSMUSG00000029802.14	ENSMUST00000031822.13	5717	16	0	3165	0	0	multi-exon	FALSE	canonical	3	51	junction_1	36.1961323900773	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACATTATCTGTCACAT	NA	False	NA	76	True	NA	NA	NA	58573655	58669496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ENSMUSG00000029814.11_49062157_49191668_1	chr6	-	4122	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	223	0	-30	0	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGCTTCTGTAGTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	49191668	49062156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ENSMUSG00000029814.11_49062157_49191668_2	chr6	-	3349	8	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_7	190.173926837986	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGCTTCTGTAGTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	49191668	49062156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082633_49191230
ENSMUSG00000029814.11_49063894_49191668_1	chr6	-	2385	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	223	1737	-30	1168	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAATTGTTGAAATTGGA	NA	False	NA	NA	False	AATAAA	-23	NA	49191668	49063893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ENSMUSG00000029814.11_49144847_49191891_1	chr6	-	964	4	FSM	ENSMUSG00000029814.11	ENSMUST00000203680.2	711	4	-253	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	219.654273803175	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTCCT	NA	False	NA	-3	True	ATTAAA	-22	NA	49191891	49144846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_49145040_49145403_49145453_49190200_49190262_49191230
ENSMUSG00000029815.13_49050782_49061639_1	chr6	+	720	4	FSM	ENSMUSG00000029815.13	ENSMUST00000128616.6	2819	4	53	2046	0	27	multi-exon	FALSE	canonical	3	781	junction_1	29.2232783924049	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTGATATGACT	348	False	NA	6	True	AATAAA	-15	NA	49050781	49061639	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_49051038_49052019_49052199_49059778_49059861_49061436
ENSMUSG00000029815.13_49050782_49061639_2	chr6	+	541	3	FSM	ENSMUSG00000029815.13	ENSMUST00000114500.3	2587	3	0	2046	0	27	multi-exon	FALSE	canonical	3	89	junction_1	380.5	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTGATATGACT	348	False	NA	6	True	AATAAA	-15	NA	49050781	49061639	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_49051038_49059778_49059861_49061436
ENSMUSG00000029817.12_49220862_49240967_1	chr6	-	2114	9	NNC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_7	180.182372889248	1574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	4590	False	NA	-8	True	AATAAA	-11	NA	49240967	49220861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49229730_49230043_49240771
ENSMUSG00000029836.16_51447643_51448848_1	chr6	+	130	2	FSM	ENSMUSG00000029836.16	ENSMUST00000153699.2	308	2	-14	192	0	-192	multi-exon	FALSE	canonical	3	2485	junction_1	0	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTTGTGAAAACCTAG	NA	False	NA	NA	False	AATAAA	-10	NA	51447642	51448848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_51447720_51448795
ENSMUSG00000029836.16_51447643_51459627_1	chr6	+	699	6	FSM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	133	1057	0	-386	multi-exon	FALSE	canonical	3	882	junction_5	643.207773584866	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGATCTTGGGTTTTGA	NA	False	NA	NA	False	NA	NA	NA	51447642	51459627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_51447720_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ENSMUSG00000029836.16_51447643_51460684_1	chr6	+	1756	6	FSM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	133	0	0	0	multi-exon	FALSE	canonical	3	882	junction_5	643.207773584866	9470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	False	NA	-1	True	AATAAA	-19	NA	51447642	51460684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_51447720_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ENSMUSG00000029840.9_35486776_35516775_1	chr6	-	2977	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	48	935	-41	-935	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTGGTACAACACGCA	4196	False	NA	-52	True	AATAAA	-16	NA	35516775	35486775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ENSMUSG00000029840.9_35487874_35516734_1	chr6	-	1838	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	89	2033	0	-2033	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTTAAATTTGATGGCC	4237	False	NA	-7	True	AATAAA	-16	NA	35516734	35487873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ENSMUSG00000029840.9_35488877_35516734_1	chr6	-	835	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	89	3036	0	-3036	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTCTATTGGAATCATT	4237	False	NA	NA	False	AGTAAA	-33	NA	35516734	35488876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ENSMUSG00000029848.12_34897895_34916279_1	chr6	+	1183	7	NIC	ENSMUSG00000029848.12	novel	1455	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	23.8607068908977	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGGTGTCCTGGCAGT	NA	False	NA	13	True	TATAAA	-18	NA	34897894	34916279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_34897990_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
ENSMUSG00000029910.15_66512374_66518009_1	chr6	+	1207	6	NNC	ENSMUSG00000029910.15	novel	7557	6	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	369.381970323404	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAAGCCTTGTGTTTT	NA	False	NA	53	True	TATAAA	-30	NA	66512373	66518009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66517013_66517642
ENSMUSG00000029910.15_66512409_66518013_1	chr6	+	1331	6	FSM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	35	6191	0	9	multi-exon	FALSE	canonical	3	769	junction_5	83.3273064487266	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCCTTGTGTTTTAAAT	NA	False	NA	-51	True	TATAAA	-34	NA	66512408	66518013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
ENSMUSG00000029910.15_66512409_66518013_2	chr6	+	1366	6	NNC	ENSMUSG00000029910.15	novel	1725	5	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	369.381970323404	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCCTTGTGTTTTAAAT	NA	False	NA	-51	True	TATAAA	-34	NA	66512408	66518013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66517205_66517644
ENSMUSG00000029910.15_66512409_66518013_3	chr6	+	1243	6	NNC	ENSMUSG00000029910.15	novel	1725	5	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	369.381970323404	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCCTTGTGTTTTAAAT	NA	False	NA	-51	True	TATAAA	-34	NA	66512408	66518013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66517060_66517622
ENSMUSG00000029911.15_40448349_40457929_1	chr6	+	630	7	FSM	ENSMUSG00000029911.15	ENSMUST00000114779.9	4398	7	63	3705	0	0	multi-exon	FALSE	canonical	3	1713	junction_1	435.133695929577	8395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40448348	40457929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ENSMUSG00000029911.15_40448349_40457929_2	chr6	+	625	7	NNC	ENSMUSG00000029911.15	novel	4398	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1038.11106502789	5991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40448348	40457929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_40448389_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ENSMUSG00000029911.15_40448349_40457929_3	chr6	+	844	7	NNC	ENSMUSG00000029911.15	novel	933	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1038.11106502789	5288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40448348	40457929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_40448608_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ENSMUSG00000029911.15_40448460_40457929_1	chr6	+	733	7	NNC	ENSMUSG00000029911.15	novel	933	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1038.11106502789	5165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40448459	40457929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_40448608_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ENSMUSG00000029913.15_65774532_65913363_1	chr6	+	1938	14	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	18447	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	43.8327914861403	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTCTTGACTTTCTTTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	65774531	65913363	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_65774602_65808232_65808356_65832932_65833108_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ENSMUSG00000029916.12_40302419_40325179_1	chr6	+	857	4	NIC	ENSMUSG00000029916.12	novel	785	8	NA	NA	0	140	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	289.012494924047	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTTAAGAATTTGATT	NA	False	NA	NA	False	AATAAA	-19	NA	40302418	40325179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_40302465_40306426_40306534_40324345_40324386_40324515
ENSMUSG00000029916.12_40302419_40373696_1	chr6	+	2298	17	NIC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_5	181.494049058778	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGTGTAATCTAAATGCA	NA	False	NA	8	True	NA	NA	NA	40302418	40373696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40331947_40332028_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ENSMUSG00000029916.12_40302419_40373696_2	chr6	+	2218	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	313	0	0	0	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGTGTAATCTAAATGCA	NA	False	NA	8	True	NA	NA	NA	40302418	40373696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ENSMUSG00000029918.10_39779126_39787827_1	chr6	-	624	3	FSM	ENSMUSG00000029918.10	ENSMUST00000031978.9	1107	3	95	388	0	0	multi-exon	FALSE	canonical	3	1131	junction_2	267.5	4993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTGTTTAAGATTGGAA	NA	False	NA	-18	True	AATAAA	-12	NA	39787827	39779125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_39779479_39782304_39782546_39787797
ENSMUSG00000029922.16_39374738_39397001_1	chr6	-	2910	8	NIC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_7	1165.4745726921	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397001	39374737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396773
ENSMUSG00000029924.13_39320553_39354606_1	chr6	-	2083	13	ISM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	3	8846	0	291	5prime_fragment	FALSE	canonical	3	160	junction_12	41.2501683498248	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGACTGTATAATTAAA	NA	False	NA	1	True	AATAAA	-19	NA	39354606	39320552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ENSMUSG00000029992.15_87019832_87065280_1	chr6	+	2335	19	FSM	ENSMUSG00000029992.15	ENSMUST00000113658.8	6238	19	4	3899	0	56	multi-exon	FALSE	canonical	3	65	junction_15	18.2452429112053	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTGTGCAATTGTCT	9949	False	NA	NA	False	AGTAAA	-41	NA	87019831	87065280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_87019988_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
ENSMUSG00000029992.15_87019832_87067311_1	chr6	+	4366	19	FSM	ENSMUSG00000029992.15	ENSMUST00000113658.8	6238	19	4	1868	0	-1868	multi-exon	FALSE	canonical	3	65	junction_15	18.2452429112053	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTACCCCCAGCTCCCTG	9949	False	NA	NA	False	ATTAAA	-12	NA	87019831	87067311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_87019988_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
ENSMUSG00000029993.17_86986218_87005443_1	chr6	+	1173	9	NNC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	921.93755719951	6725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCTTCCTCTCACGAA	NA	False	NA	25	True	AATAAA	-31	NA	86986217	87005443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_86986353_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ENSMUSG00000030002.16_85921724_85938625_1	chr6	-	3937	9	FSM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	24	2474	-1	-2474	multi-exon	FALSE	canonical	3	240	junction_7	14.8070928949608	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGCTTCTAGTAGGATG	7344	False	NA	NA	False	NA	NA	NA	85938625	85921723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
ENSMUSG00000030002.16_85924326_85938625_2	chr6	-	1335	9	FSM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	24	5076	-1	399	multi-exon	FALSE	canonical	3	240	junction_7	14.8070928949608	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTTTCCCTGTATAT	7344	False	NA	-1	True	AATAGA	-19	NA	85938625	85924325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
ENSMUSG00000030002.16_85924494_85938625_1	chr6	-	1272	10	NNC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	-1	231	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	97.2756043922449	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAAAACTTTCTGAACA	7344	False	NA	-33	True	AATAAA	-16	NA	85938625	85924493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85932277_85932383_85935565_85935698_85936197_85936274_85938419
ENSMUSG00000030007.9_85423792_85428927_1	chr6	+	1056	5	NIC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	-4704	-3957	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTACCTCGGGAGCTAACC	NA	False	NA	NA	False	NA	NA	NA	85423791	85428927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428738
ENSMUSG00000030007.9_85429001_85445457_1	chr6	+	1936	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	505	0	0	0	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	16853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTCTGCTGTGATGG	5115	False	NA	16	True	AGTAAA	-18	NA	85429000	85445457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ENSMUSG00000030007.9_85429034_85445457_1	chr6	+	1903	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	538	0	0	0	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	16808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTCTGCTGTGATGG	5148	False	NA	16	True	AGTAAA	-18	NA	85429033	85445457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ENSMUSG00000030007.9_85429074_85445457_1	chr6	+	1863	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	578	0	0	0	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	16658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTCTGCTGTGATGG	5188	False	NA	16	True	AGTAAA	-18	NA	85429073	85445457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ENSMUSG00000030008.10_85423792_85428927_1	chr6	-	1398	4	FSM	ENSMUSG00000030008.10	ENSMUST00000139875.8	1000	4	0	-398	0	0	multi-exon	FALSE	canonical	3	19	junction_1	61.5593661074865	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428927	85423791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_85424790_85424917_85425028_85425472_85425574_85428738
ENSMUSG00000030008.10_85423792_85428927_2	chr6	-	1279	4	NIC	ENSMUSG00000030008.10	novel	1000	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	68	junction_3	41.907305117631	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428927	85423791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_85424671_85424917_85425028_85425472_85425574_85428738
ENSMUSG00000030008.10_85423792_85428927_3	chr6	-	955	4	NIC	ENSMUSG00000030008.10	novel	953	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	67.1830004953303	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428927	85423791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_85424280_85424502_85424671_85424917_85425028_85428738
ENSMUSG00000030016.15_83891379_83919877_1	chr6	+	1759	5	ISM	ENSMUSG00000030016.15	ENSMUST00000204202.3	2806	12	24	13867	0	-102	5prime_fragment	FALSE	canonical	3	285	junction_4	10.8972473588517	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTCTAGGAGATCAAGC	NA	False	NA	NA	False	AAGAAA	-40	NA	83891378	83919877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815
ENSMUSG00000030016.15_83956064_83963853_1	chr6	+	1360	4	ISM	ENSMUSG00000030016.15	ENSMUST00000204751.3	9033	27	64715	2679	-528	0	3prime_fragment	FALSE	canonical	3	162	junction_1	138.580902965259	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	2189	False	NA	NA	False	AATAAA	-22	NA	83956063	83963853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_83956892_83960957_83961057_83961758_83961878_83963539
ENSMUSG00000030022.15_92793459_92815698_1	chr6	-	807	5	NNC	ENSMUSG00000030022.15	novel	2541	14	NA	NA	15915	-23468	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAACAAGTAAGTAAAGCC	947	False	NA	NA	False	NA	NA	NA	92815698	92793458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_92793642_92804897_92805085_92808917_92809046_92811419_92811468_92815437
ENSMUSG00000030029.15_94477314_94581653_1	chr6	-	1920	10	NIC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	721	104196	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGCAACTACTTCCGGG	NA	False	NA	NA	False	NA	NA	NA	94581653	94477313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94553314_94553360_94569392_94569463_94575360_94575426_94576159_94576234_94580532
ENSMUSG00000030035.15_83096025_83098392_2	chr6	-	1166	4	FSM	ENSMUSG00000030035.15	ENSMUST00000113936.10	1314	4	148	0	-5	0	multi-exon	FALSE	canonical	3	41	junction_3	56.6627449623354	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGATTCTGGGTAGAG	NA	False	NA	-7	True	ATTAAA	-17	NA	83098392	83096024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83098183
ENSMUSG00000030037.10_83086101_83086920_1	chr6	+	624	3	NNC	ENSMUSG00000030037.10	novel	710	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	381	2725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	7463	False	NA	NA	False	ATTAAA	-19	NA	83086100	83086920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_83086185_83086294_83086417_83086502
ENSMUSG00000030041.10_82923883_82933507_1	chr6	+	169	2	ISM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	0	73657	0	-73297	5prime_fragment	FALSE	canonical	3	454	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCGAGGCTTCTCATTGT	NA	False	NA	NA	False	NA	NA	NA	82923882	82933507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_82923934_82933389
ENSMUSG00000030041.10_82923883_83007164_1	chr6	+	1804	9	NIC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	187.231641289607	765	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTTCAGAGCATTCC	NA	False	NA	12	True	ATTAAA	-17	NA	82923882	83007164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83006750
ENSMUSG00000030042.16_82595771_82682346_1	chr6	-	659	4	FSM	ENSMUSG00000030042.16	ENSMUST00000161309.8	457	4	0	-202	0	202	multi-exon	FALSE	canonical	3	132	junction_1	435.143909784134	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTATGTCTCCCT	6109	False	NA	78	True	NA	NA	NA	82682346	82595770	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_82596120_82628417_82628460_82629063_82629149_82682163
ENSMUSG00000030042.16_82595862_82629855_1	chr6	-	636	4	NIC	ENSMUSG00000030042.16	novel	457	4	NA	NA	-4	111	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	385.203842140755	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTTTTTCTTTTTCTT	NA	False	NA	-13	True	NA	NA	NA	82629855	82595861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_82596120_82628417_82628460_82629063_82629149_82629604
ENSMUSG00000030042.16_82595862_82682346_1	chr6	-	568	4	FSM	ENSMUSG00000030042.16	ENSMUST00000161309.8	457	4	0	-111	0	111	multi-exon	FALSE	canonical	3	132	junction_1	435.143909784134	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTTTTTCTTTTTCTT	6109	False	NA	-13	True	NA	NA	NA	82682346	82595861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_82596120_82628417_82628460_82629063_82629149_82682163
ENSMUSG00000030042.16_82623682_82682346_1	chr6	-	1646	4	NIC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_3	397.998604129322	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTCTTGAAGTGTCTTA	6109	False	NA	1	True	ATTAAA	-27	NA	82682346	82623681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_82625018_82628417_82628460_82629063_82629149_82682163
ENSMUSG00000030042.16_82624297_82629855_1	chr6	-	1099	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	55	615	-4	0	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATGTGATATAAAATTT	NA	False	NA	-36	True	NA	NA	NA	82629855	82624296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
ENSMUSG00000030042.16_82624297_82682346_1	chr6	-	1031	4	NIC	ENSMUSG00000030042.16	novel	890	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_3	397.998604129322	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATGTGATATAAAATTT	6109	False	NA	-36	True	NA	NA	NA	82682346	82624296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_82625018_82628417_82628460_82629063_82629149_82682163
ENSMUSG00000030042.16_82624712_82629855_1	chr6	-	684	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	55	1030	-4	112	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTATATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	82629855	82624711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
ENSMUSG00000030042.16_82624712_82682346_1	chr6	-	616	4	NIC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	0	112	combination_of_known_junctions	FALSE	canonical	3	146	junction_3	397.998604129322	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTATATTGC	6109	False	NA	-1	True	AATAAA	-19	NA	82682346	82624711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_82625018_82628417_82628460_82629063_82629149_82682163
ENSMUSG00000030045.11_81936019_81942939_1	chr6	-	1066	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	0	-1187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	269.009293519759	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTGCACACATATACAC	NA	False	NA	0	True	AATAAA	-24	NA	81942939	81936018	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_81936148_81938894_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ENSMUSG00000030045.11_81938436_81942939_1	chr6	-	1396	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	0	3604	0	519	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	2228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAAAGTCTGCATGTCAG	NA	False	NA	NA	False	ATTAAA	-28	NA	81942939	81938435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ENSMUSG00000030045.11_81938436_81942939_2	chr6	-	1215	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	0	519	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	269.009293519759	1698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAAAGTCTGCATGTCAG	NA	False	NA	NA	False	ATTAAA	-28	NA	81942939	81938435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_81938566_81938746_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ENSMUSG00000030045.11_81938552_81942939_1	chr6	-	1100	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	0	403	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	269.009293519759	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTGTTCTGAGAATGCC	NA	False	NA	NA	False	NA	NA	NA	81942939	81938551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_81938559_81938738_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ENSMUSG00000030045.11_81938552_81942939_2	chr6	-	1099	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	0	403	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	269.009293519759	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTGTTCTGAGAATGCC	NA	False	NA	NA	False	NA	NA	NA	81942939	81938551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_81938566_81938746_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ENSMUSG00000030045.11_81938552_81942939_3	chr6	-	1280	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	0	3720	0	403	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTGTTCTGAGAATGCC	NA	False	NA	NA	False	NA	NA	NA	81942939	81938551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ENSMUSG00000030056.9_87795429_87815701_1	chr6	-	1580	11	FSM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	79	4178	-6	3061	multi-exon	FALSE	canonical	3	216	junction_5	30.4276190327143	1568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCCTAGAGCTTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	87815701	87795428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
ENSMUSG00000030056.9_87795678_87815701_1	chr6	-	1331	11	FSM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	79	4427	-6	2812	multi-exon	FALSE	canonical	3	216	junction_5	30.4276190327143	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCTAAATTTAGAGACACA	NA	False	NA	-1	True	AATACA	-19	NA	87815701	87795677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
ENSMUSG00000030056.9_87795767_87815758_1	chr6	-	1299	11	FSM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	22	4516	-20	2723	multi-exon	FALSE	canonical	3	216	junction_5	30.4276190327143	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTTGCCCTATACTCT	NA	False	NA	-13	True	NA	NA	NA	87815758	87795766	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
ENSMUSG00000030057.16_87820064_87828009_1	chr6	-	1629	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	79	467	0	0	multi-exon	FALSE	canonical	3	7593	junction_2	1716.19673988736	20044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828009	87820063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
ENSMUSG00000030057.16_87820064_87828042_1	chr6	-	1662	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	46	467	0	0	multi-exon	FALSE	canonical	3	7593	junction_2	1716.19673988736	22700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828042	87820063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
ENSMUSG00000030061.17_97160779_97182523_1	chr6	-	2361	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	85	-189	-2	0	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	1661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATAGTCAAGTCTC	NA	False	NA	-18	True	AGTAAA	-17	NA	97182523	97160778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ENSMUSG00000030061.17_97160968_97182523_1	chr6	-	2130	17	FSM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	-2	337	-2	0	multi-exon	FALSE	canonical	3	82	junction_16	154.413292315623	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGTATATCAAT	NA	False	NA	-7	True	AATAAA	-24	NA	97182523	97160967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182493
ENSMUSG00000030061.17_97160968_97182608_1	chr6	-	2250	18	NNC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	171.417578326056	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGTATATCAAT	NA	False	NA	-7	True	AATAAA	-24	NA	97182608	97160967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163036_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ENSMUSG00000030061.17_97161713_97182523_1	chr6	-	1385	17	FSM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	-2	1082	-2	-745	multi-exon	FALSE	canonical	3	82	junction_16	154.413292315623	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATAGAAATAATATACTT	NA	False	NA	NA	False	AATAAA	-19	NA	97182523	97161712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182493
ENSMUSG00000030061.17_97161713_97182523_2	chr6	-	1427	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	85	745	-2	-745	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATAGAAATAATATACTT	NA	False	NA	NA	False	AATAAA	-19	NA	97182523	97161712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ENSMUSG00000030062.8_88061464_88080946_1	chr6	+	2293	10	FSM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	0	1340	0	577	multi-exon	FALSE	canonical	3	2268	junction_5	110.706262438987	2733	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTGCTGTACTGAAAAA	537	False	NA	14	True	AATAAA	-20	NA	88061463	88080946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
ENSMUSG00000030082.15_88481783_88495818_1	chr6	-	1881	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	69	1222	-8	0	multi-exon	FALSE	canonical	3	923	junction_2	46.8136802778528	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCTGGCAGCTGCAAGG	9164	False	NA	NA	False	TTTAAA	-15	NA	88495818	88481782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ENSMUSG00000030083.12_88812896_88816571_1	chr6	-	1502	7	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	1	4	junction_6	144.255175143062	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCCTGTTGTTGGGGT	9275	False	NA	-4	True	AATAAA	-21	NA	88816571	88812895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816312
ENSMUSG00000030083.12_88812896_88816571_2	chr6	-	1347	7	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	133.424968511228	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCCTGTTGTTGGGGT	9275	False	NA	-4	True	AATAAA	-21	NA	88816571	88812895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_88813435_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312
ENSMUSG00000030083.12_88812896_88816571_3	chr6	-	1648	7	ISM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	2311	0	0	0	intron_retention	FALSE	canonical	3	333	junction_3	29.1799969537734	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCCTGTTGTTGGGGT	9275	False	NA	-4	True	AATAAA	-21	NA	88816571	88812895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166
ENSMUSG00000030089.16_90581934_90623394_1	chr6	+	2185	11	FSM	ENSMUSG00000030089.16	ENSMUST00000044019.16	2412	11	227	0	227	0	multi-exon	FALSE	canonical	3	6	junction_2	19.246038553427	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGTCCTCCATCCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	90581933	90623394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_90581991_90588860_90589164_90601793_90601902_90603361_90603434_90610592_90610738_90612231_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550
ENSMUSG00000030089.16_90612303_90623394_1	chr6	+	1407	7	NNC	ENSMUSG00000030089.16	novel	2324	10	NA	NA	16174	0	at_least_one_novel_splicesite	TRUE	canonical	2	15	junction_6	13.490737563232	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGTCCTCCATCCTTC	2826	False	NA	NA	False	AATAAA	-17	NA	90612302	90623394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550_90623032_90623053
ENSMUSG00000030095.11_91450733_91464911_1	chr6	+	2321	12	FSM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	48	534	0	-534	multi-exon	FALSE	canonical	3	107	junction_7	13.7209497779825	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATTTCTAAGTTTCCTT	9736	False	NA	NA	False	AATAAA	-20	NA	91450732	91464911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ENSMUSG00000030105.9_108760060_108799359_1	chr6	+	1563	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	0	2880	0	625	multi-exon	TRUE	canonical	3	458	junction_6	33.5480583972042	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTCATCTGAATCCACG	NA	False	NA	NA	False	AATAAA	-17	NA	108760059	108799359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ENSMUSG00000030105.9_108760060_108800518_1	chr6	+	2722	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	0	1721	0	-1721	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACCTTAAAATGTATCA	NA	False	NA	28	True	AATAAA	-28	NA	108760059	108800518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ENSMUSG00000030105.9_108760060_108800682_1	chr6	+	2886	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	0	1557	0	-1557	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGTATCATGGTCCCC	NA	False	NA	14	True	AATAAA	-18	NA	108760059	108800682	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ENSMUSG00000030116.15_122490542_122505591_1	chr6	+	848	10	FSM	ENSMUSG00000030116.15	ENSMUST00000148517.8	1506	10	0	658	0	0	multi-exon	FALSE	canonical	1	2	junction_5	61.5529481998934	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGGTTTGCTGATTTCT	NA	False	NA	4	True	AATACA	-15	NA	122490541	122505591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_122490692_122491299_122491360_122492306_122492343_122497537_122497571_122497854_122497888_122498851_122498888_122501445_122501470_122502909_122502998_122503745_122503820_122505277
ENSMUSG00000030116.15_122498797_122505591_1	chr6	+	567	4	ISM	ENSMUSG00000030116.15	ENSMUST00000118626.8	748	9	8179	0	-661	0	3prime_fragment	FALSE	canonical	1	2	junction_1	68.5921926234239	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGGTTTGCTGATTTCT	7070	False	NA	4	True	AATACA	-15	NA	122498796	122505591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_122498888_122502909_122502998_122503745_122503820_122505277
ENSMUSG00000030116.15_122499806_122505591_2	chr6	+	544	5	NNC	ENSMUSG00000030116.15	novel	2491	4	NA	NA	348	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	33.0331273118365	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGGTTTGCTGATTTCT	8079	False	NA	4	True	AATACA	-15	NA	122499805	122505591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_122499850_122501445_122501470_122502909_122502998_122503745_122503820_122505277
ENSMUSG00000030116.15_122499806_122506253_1	chr6	+	1206	5	NNC	ENSMUSG00000030116.15	novel	2491	4	NA	NA	348	4	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	33.0331273118365	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACGGGCATGTTTTATT	8079	False	NA	NA	False	AAAAAG	-4	NA	122499805	122506253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_122499850_122501445_122501470_122502909_122502998_122503745_122503820_122505277
ENSMUSG00000030117.6_122583206_122586824_1	chr6	-	1059	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	222	844	-41	-844	multi-exon	FALSE	canonical	3	704	junction_1	0	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTATGCTCTCTT	9996	False	NA	-27	True	AATAAA	-13	NA	122586824	122583205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_122584095_122586654
ENSMUSG00000030117.6_122583206_122587046_1	chr6	-	1281	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	0	844	0	-844	multi-exon	FALSE	canonical	3	704	junction_1	0	3644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTATGCTCTCTT	9980	False	NA	-27	True	AATAAA	-13	NA	122587046	122583205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_122584095_122586654
ENSMUSG00000030117.6_122583206_122587102_1	chr6	-	1337	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	-56	844	-56	-844	multi-exon	FALSE	canonical	3	704	junction_1	0	3649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTATGCTCTCTT	9924	False	NA	-27	True	AATAAA	-13	NA	122587102	122583205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_122584095_122586654
ENSMUSG00000030120.15_124908395_124912994_1	chr6	+	1361	9	FSM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	0	114	0	-113	multi-exon	FALSE	canonical	3	3449	junction_8	252.103029533562	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCCCACCCATCACAGAA	NA	False	NA	-87	True	NA	NA	NA	124908394	124912994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912585
ENSMUSG00000030120.15_124908395_124913108_1	chr6	+	1652	8	ISM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	0	0	0	0	intron_retention	FALSE	canonical	3	3577	junction_4	212.973122765311	2329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATTCTGGCTGTACTT	NA	False	NA	27	True	AATAAA	-17	NA	124908394	124913108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195
ENSMUSG00000030120.15_124908395_124913108_2	chr6	+	563	3	NNC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2059	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATTCTGGCTGTACTT	NA	False	NA	27	True	AATAAA	-17	NA	124908394	124913108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_124908550_124909061_124909092_124912730
ENSMUSG00000030126.18_116150592_116151475_10	chr6	-	830	2	Genic_Genomic	ENSMUSG00000030126.18	novel	2697	1	NA	NA	-201	-2014	multi-exon	FALSE	canonical	0	0	junction_1	0	22239	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTTGGTTATTATGTA	NA	False	NA	NA	False	NA	NA	NA	116151475	116150591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_116151189_116151242
ENSMUSG00000030126.18_116150592_116151475_11	chr6	-	830	2	Genic_Genomic	ENSMUSG00000030126.18	novel	2697	1	NA	NA	-201	-2014	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTTGGTTATTATGTA	NA	False	NA	NA	False	NA	NA	NA	116151475	116150591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_116151332_116151385
ENSMUSG00000030126.18_116150592_116151475_12	chr6	-	690	2	Genic_Genomic	ENSMUSG00000030126.18	novel	2697	1	NA	NA	-201	-2014	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1056	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTTGGTTATTATGTA	NA	False	NA	NA	False	NA	NA	NA	116151475	116150591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_116150708_116150901
ENSMUSG00000030126.18_116150592_116151475_13	chr6	-	715	2	Genic_Genomic	ENSMUSG00000030126.18	novel	2697	1	NA	NA	-201	-2014	multi-exon	FALSE	canonical	0	0	junction_1	0	797	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTTGGTTATTATGTA	NA	False	NA	NA	False	NA	NA	NA	116151475	116150591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_116150962_116151130
ENSMUSG00000030126.18_116150592_116151475_2	chr6	-	709	2	Genic_Genomic	ENSMUSG00000030126.18	novel	2697	1	NA	NA	-201	-2014	multi-exon	FALSE	non_canonical	0	0	junction_1	0	865	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTTGGTTATTATGTA	NA	False	NA	NA	False	NA	NA	NA	116151475	116150591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_116150749_116150923
ENSMUSG00000030126.18_116150592_116151475_4	chr6	-	697	2	Genic_Genomic	ENSMUSG00000030126.18	novel	2697	1	NA	NA	-201	-2014	multi-exon	FALSE	non_canonical	0	0	junction_1	0	992	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTTGGTTATTATGTA	NA	False	NA	NA	False	NA	NA	NA	116151475	116150591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_116150722_116150908
ENSMUSG00000030126.18_116150592_116151475_5	chr6	-	815	2	Genic_Genomic	ENSMUSG00000030126.18	novel	2697	1	NA	NA	-201	-2014	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3551	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTTGGTTATTATGTA	NA	False	NA	NA	False	NA	NA	NA	116151475	116150591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_116150893_116150961
ENSMUSG00000030126.18_116150592_116151475_6	chr6	-	660	2	Genic_Genomic	ENSMUSG00000030126.18	novel	2697	1	NA	NA	-201	-2014	multi-exon	FALSE	canonical	0	0	junction_1	0	862	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTTGGTTATTATGTA	NA	False	NA	NA	False	NA	NA	NA	116151475	116150591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_116150813_116151036
ENSMUSG00000030126.18_116150592_116151475_7	chr6	-	793	2	Genic_Genomic	ENSMUSG00000030126.18	novel	2697	1	NA	NA	-201	-2014	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1437	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTTGGTTATTATGTA	NA	False	NA	NA	False	NA	NA	NA	116151475	116150591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_116150932_116151022
ENSMUSG00000030126.18_116150592_116151475_8	chr6	-	792	2	Genic_Genomic	ENSMUSG00000030126.18	novel	2697	1	NA	NA	-201	-2014	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2601	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTTGGTTATTATGTA	NA	False	NA	NA	False	NA	NA	NA	116151475	116150591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_116150817_116150908
ENSMUSG00000030126.18_116150592_116151475_9	chr6	-	577	2	Genic_Genomic	ENSMUSG00000030126.18	novel	2697	1	NA	NA	-201	-2014	multi-exon	FALSE	non_canonical	0	0	junction_1	0	690	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTTGGTTATTATGTA	NA	False	NA	NA	False	NA	NA	NA	116151475	116150591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_116150824_116151130
ENSMUSG00000030126.18_116150698_116151475_1	chr6	-	709	2	Genic_Genomic	ENSMUSG00000030126.18	novel	2697	1	NA	NA	-201	-2120	multi-exon	FALSE	non_canonical	0	0	junction_1	0	849	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGACCGTGCTGAAGCTC	NA	False	NA	NA	False	NA	NA	NA	116151475	116150697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_116150893_116150961
ENSMUSG00000030127.16_124935376_124942253_1	chr6	-	1263	8	NIC	ENSMUSG00000030127.16	novel	1328	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_7	695.556714335461	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGTATGCCAGGAGAT	NA	False	NA	-16	True	ATTAAA	-13	NA	124942253	124935375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942181
ENSMUSG00000030127.16_124935376_124942411_1	chr6	-	2103	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1123	junction_1	272.823034517369	2430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGTATGCCAGGAGAT	NA	False	NA	-16	True	ATTAAA	-13	NA	124942411	124935375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ENSMUSG00000030127.16_124935779_124942253_1	chr6	-	1725	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_7	583.751379843669	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942253	124935778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942181
ENSMUSG00000030127.16_124935779_124942253_2	chr6	-	1792	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_7	623.446346479611	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942253	124935778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942114
ENSMUSG00000030127.16_124935779_124942411_1	chr6	-	1861	7	ISM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	90	403	0	0	5prime_fragment	FALSE	canonical	3	1332	junction_6	190.502333027417	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942411	124935778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ENSMUSG00000030127.16_124935779_124942411_2	chr6	-	1700	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1123	junction_1	272.823034517369	2155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942411	124935778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ENSMUSG00000030127.16_124935779_124942475_1	chr6	-	1559	7	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_6	644.566951957324	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942475	124935778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124942364
ENSMUSG00000030127.16_124935779_124942475_2	chr6	-	1925	7	ISM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	26	403	0	0	5prime_fragment	FALSE	canonical	3	1332	junction_6	190.502333027417	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942475	124935778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ENSMUSG00000030127.16_124935779_124942475_3	chr6	-	1764	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1123	junction_1	272.823034517369	2283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942475	124935778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ENSMUSG00000030134.12_118043380_118068507_1	chr6	+	3202	13	FSM	ENSMUSG00000030134.12	ENSMUST00000203482.2	2227	13	0	-975	0	0	multi-exon	FALSE	canonical	3	24	junction_10	5.92780641459291	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	3	True	NA	NA	NA	118043379	118068507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
ENSMUSG00000030161.9_129510163_129518259_1	chr6	+	730	4	FSM	ENSMUSG00000030161.9	ENSMUST00000032264.9	1820	4	40	1050	0	59	multi-exon	FALSE	canonical	3	115	junction_2	5.71547606649408	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGCACACGCTGTCGTCT	NA	False	NA	NA	False	NA	NA	NA	129510162	129518259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_129510500_129514453_129514533_129515532_129515652_129518064
ENSMUSG00000030168.14_119330111_119394486_1	chr6	-	4005	8	FSM	ENSMUSG00000030168.14	ENSMUST00000032272.13	4184	8	179	0	-50	0	multi-exon	TRUE	canonical	3	26	junction_7	32.1685611510775	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTGTGTTTTTTTTT	7504	False	NA	0	True	AATAAA	-21	NA	119394486	119330110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119394380
ENSMUSG00000030168.14_119332232_119394486_1	chr6	-	1884	8	FSM	ENSMUSG00000030168.14	ENSMUST00000032272.13	4184	8	179	2121	-50	195	multi-exon	FALSE	canonical	3	26	junction_7	32.1685611510775	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGTAAATAAGATTTCT	7504	False	NA	NA	False	AAGAAA	-1	NA	119394486	119332231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119394380
ENSMUSG00000030172.16_119720333_119825111_1	chr6	-	2696	12	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	0	-22094	combination_of_known_junctions	FALSE	canonical	3	90	junction_8	10.6971843055131	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTTGACCGTCTCTTGG	NA	False	NA	NA	False	NA	NA	NA	119825111	119720332	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ENSMUSG00000030177.15_120301284_120334328_1	chr6	-	2517	13	NNC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	86.4659133223415	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	False	NA	-14	True	AATAAA	-18	NA	120334328	120301283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_120302105_120302135_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120334287
ENSMUSG00000030177.15_120301284_120334328_2	chr6	-	2463	13	NNC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.8387884757201	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	False	NA	-14	True	AATAAA	-18	NA	120334328	120301283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_120302105_120302135_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
ENSMUSG00000030177.15_120301284_120334433_1	chr6	-	2568	13	NNC	ENSMUSG00000030177.15	novel	1887	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.8387884757201	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	False	NA	-14	True	AATAAA	-18	NA	120334433	120301283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_120302105_120302135_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
ENSMUSG00000030177.15_120301284_120334433_2	chr6	-	2622	13	NNC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.4659133223415	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	False	NA	-14	True	AATAAA	-18	NA	120334433	120301283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_120302105_120302135_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120334287
ENSMUSG00000030188.13_131261476_131270207_1	chr6	-	842	6	FSM	ENSMUSG00000030188.13	ENSMUST00000173198.8	561	6	-93	-188	0	0	multi-exon	FALSE	canonical	2	2	junction_5	222.978563992147	1990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTTACATGGTTTTTA	NA	False	NA	NA	False	TATAAA	-19	NA	131270207	131261475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131268703_131268904_131270034
ENSMUSG00000030188.13_131261476_131270207_2	chr6	-	642	5	FSM	ENSMUSG00000030188.13	ENSMUST00000032307.12	767	5	0	125	0	0	multi-exon	FALSE	canonical	2	356	junction_3	64.3059095262636	2593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTTACATGGTTTTTA	NA	False	NA	NA	False	TATAAA	-19	NA	131270207	131261475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131270034
ENSMUSG00000030189.16_131341818_131356395_1	chr6	-	989	5	ISM	ENSMUSG00000030189.16	ENSMUST00000087865.4	1684	9	9044	0	-930	0	3prime_fragment	FALSE	canonical	3	624	junction_4	1059.20143858475	1376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGTAACTAGTGTGTA	8965	False	NA	-9	True	AATAAA	-21	NA	131356395	131341817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131356320
ENSMUSG00000030200.14_134391428_134415704_1	chr6	+	2167	6	FSM	ENSMUSG00000030200.14	ENSMUST00000111960.2	1578	6	37	-626	0	5	multi-exon	FALSE	canonical	3	57	junction_3	10	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGCCTGTAACCCAAGC	NA	False	NA	18	True	AATAAA	-30	NA	134391427	134415704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_134391599_134400573_134401026_134404258_134404424_134407028_134407100_134409108_134409376_134414663
ENSMUSG00000030204.11_134988598_135000739_1	chr6	+	1733	12	NNC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	159.223321519501	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTGTGTGTGCACT	6597	False	NA	20	True	ATTAAA	-20	NA	134988597	135000739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997642_134998411_134998542_135000241
ENSMUSG00000030204.11_134988598_135000739_2	chr6	+	1734	12	NNC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	157.795191035879	1577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTGTGTGTGCACT	6597	False	NA	20	True	ATTAAA	-20	NA	134988597	135000739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992604_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
ENSMUSG00000030213.13_136495844_136576701_1	chr6	+	3228	12	ISM	ENSMUSG00000030213.13	ENSMUST00000032335.13	8059	15	44	11159	0	-8616	5prime_fragment	FALSE	canonical	3	154	junction_2	23.383260241124	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCGACCGTTGCAGCCC	7092	False	NA	NA	False	NA	NA	NA	136495843	136576701	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647
ENSMUSG00000030216.13_136790652_136805146_2	chr6	-	2649	11	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	531.287125761579	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGTGTTTGTGTAATG	2917	False	NA	-1	True	AATAAA	-19	NA	136805146	136790651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802971_136803108_136805017
ENSMUSG00000030216.13_136791543_136805146_1	chr6	-	1758	11	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-5	-891	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	531.287125761579	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGTTGAGTGCCC	2917	False	NA	NA	False	NA	NA	NA	136805146	136791542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802971_136803108_136805017
ENSMUSG00000030224.11_137712076_137728094_1	chr6	+	1814	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	0	836	0	420	multi-exon	FALSE	canonical	3	757	junction_9	58.2073772423402	501	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTCTCTTTTTTTGG	NA	False	NA	89	True	AATAAA	-16	NA	137712075	137728094	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUSG00000030225.12_137731544_137814328_1	chr6	+	1177	9	FSM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	-12	564	0	-106	multi-exon	FALSE	canonical	3	541	junction_6	37.3511629671688	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAATCTAAATGTGGATT	NA	False	NA	2	True	AATAAA	-14	NA	137731543	137814328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ENSMUSG00000030225.12_137731574_137814434_1	chr6	+	1253	9	FSM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	18	458	0	0	multi-exon	FALSE	canonical	3	541	junction_6	37.3511629671688	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATGTTTCTAGTAGC	NA	False	NA	108	True	NA	NA	NA	137731573	137814434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ENSMUSG00000030231.12_140369780_140496775_1	chr6	+	1698	11	ISM	ENSMUSG00000030231.12	ENSMUST00000203517.3	3006	23	-107	35450	0	-1980	5prime_fragment	FALSE	canonical	3	72	junction_4	12.4995999935998	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGCAGGTGTCTGACCA	NA	False	NA	NA	False	NA	NA	NA	140369779	140496775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486
ENSMUSG00000030243.17_142307624_142332800_1	chr6	-	2854	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	13	522	0	223	multi-exon	TRUE	canonical	3	113	junction_14	18.9118524546197	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCGTTTCACCAATTAAGA	6193	False	NA	0	True	ATTAAA	-21	NA	142332800	142307623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ENSMUSG00000030243.17_142307847_142332800_1	chr6	-	2631	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	13	745	0	0	multi-exon	FALSE	canonical	3	113	junction_14	18.9118524546197	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCTGGTGTCTGCATT	6193	False	NA	1	True	ATTAAA	-40	NA	142332800	142307846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ENSMUSG00000030245.11_142332947_142347862_1	chr6	+	825	3	FSM	ENSMUSG00000030245.11	ENSMUST00000146508.2	367	3	-32	-426	0	426	multi-exon	FALSE	canonical	3	32	junction_1	306	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTGGAGCCAGATAAAA	NA	False	NA	75	True	AATAAA	-27	NA	142332946	142347862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_142333096_142341913_142341996_142347268
ENSMUSG00000030245.11_142332947_142347862_2	chr6	+	1096	5	FSM	ENSMUSG00000030245.11	ENSMUST00000032372.7	2818	5	0	1722	0	426	multi-exon	FALSE	canonical	3	520	junction_3	45.9911676303179	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTGGAGCCAGATAAAA	NA	False	NA	75	True	AATAAA	-27	NA	142332946	142347862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268
ENSMUSG00000030245.11_142332947_142347862_3	chr6	+	1060	6	NNC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	0	426	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	283.233190145505	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTGGAGCCAGATAAAA	NA	False	NA	75	True	AATAAA	-27	NA	142332946	142347862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_142333096_142338055_142338148_142339653_142339729_142339832_142339901_142341913_142341996_142347268
ENSMUSG00000030245.11_142332947_142349584_1	chr6	+	2794	6	NNC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	241.036096881774	1366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	False	NA	25	True	AATAAA	-19	NA	142332946	142349584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268_142349209_142349232
ENSMUSG00000030254.17_112596906_112673609_1	chr6	-	2507	13	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	58.64790182853	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGTGAGTATTTGAAT	NA	False	NA	-79	True	AATGAA	-29	NA	112673609	112596905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ENSMUSG00000030254.17_112597644_112673609_1	chr6	-	1706	12	FSM	ENSMUSG00000030254.17	ENSMUST00000077088.11	2577	12	38	833	0	148	multi-exon	FALSE	canonical	3	81	junction_1	49.718048005937	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCATGCTTCTTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	112673609	112597643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_112597866_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ENSMUSG00000030264.15_113023288_113045234_1	chr6	+	2130	10	NIC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	204.840377481867	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	3	True	ATTAAA	-16	NA	113023287	113045234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_113023421_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ENSMUSG00000030264.15_113023419_113045234_1	chr6	+	1999	10	NIC	ENSMUSG00000030264.15	novel	855	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	204.840377481867	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	3	True	ATTAAA	-16	NA	113023418	113045234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_113023421_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ENSMUSG00000030268.18_144944884_144993387_1	chr6	-	2482	11	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	210	junction_10	1167.49801284627	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTGGATTTGAATC	NA	False	NA	-24	True	AATAAA	-16	NA	144993387	144944883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_144993165
ENSMUSG00000030268.18_144944884_144994542_1	chr6	-	2514	11	FSM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	-4	5323	-4	0	multi-exon	FALSE	canonical	3	243	junction_10	1157.84085262181	1523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTGGATTTGAATC	NA	False	NA	-24	True	AATAAA	-16	NA	144994542	144944883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_144994288
ENSMUSG00000030268.18_144944884_145021779_1	chr6	-	2353	10	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	131	0	combination_of_known_splicesites	FALSE	canonical	3	151	junction_9	1239.05241571488	1648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTGGATTTGAATC	8616	False	NA	-24	True	AATAAA	-16	NA	145021779	144944883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_145021614
ENSMUSG00000030268.18_144944884_145021779_2	chr6	-	1993	8	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	131	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	1423.55806029133	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTGGATTTGAATC	8616	False	NA	-24	True	AATAAA	-16	NA	145021779	144944883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144993017_144993090_145021614
ENSMUSG00000030268.18_144944884_145021779_3	chr6	-	2420	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	131	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1225.86230874434	8515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTGGATTTGAATC	8616	False	NA	-24	True	AATAAA	-16	NA	145021779	144944883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955857_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ENSMUSG00000030268.18_144944884_145021779_4	chr6	-	2517	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	131	0	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_11	1507.73835882678	7818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTGGATTTGAATC	8616	False	NA	-24	True	AATAAA	-16	NA	145021779	144944883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145002586_145002679_145021614
ENSMUSG00000030268.18_144944884_145021779_5	chr6	-	2418	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	131	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1230.39642392198	7855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTGGATTTGAATC	8616	False	NA	-24	True	AATAAA	-16	NA	145021779	144944883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985355_144993017_144993090_145021614
ENSMUSG00000030268.18_144945196_145021779_1	chr6	-	2113	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	131	312	131	-312	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	2065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATAGTAGGTATTTTCA	8616	False	NA	NA	False	NA	NA	NA	145021779	144945195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ENSMUSG00000030268.18_144945739_144994542_1	chr6	-	1659	11	FSM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	-4	6178	-4	-855	multi-exon	FALSE	canonical	3	243	junction_10	1157.84085262181	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGATGTCTATGTGCTG	NA	False	NA	NA	False	NA	NA	NA	144994542	144945738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_144994288
ENSMUSG00000030268.18_144945739_145021779_1	chr6	-	1570	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	131	855	131	-855	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	1523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGATGTCTATGTGCTG	8616	False	NA	NA	False	NA	NA	NA	145021779	144945738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ENSMUSG00000030269.15_113246765_113258157_1	chr6	+	997	4	ISM	ENSMUSG00000030269.15	ENSMUST00000129883.8	2531	18	31907	191	255	0	3prime_fragment	FALSE	canonical	3	298	junction_2	43.1508980207828	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTTTCATTAGCATT	8873	False	NA	13	True	AATAAA	-14	NA	113246764	113258157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_113246832_113247482_113247663_113254750_113254907_113257563
ENSMUSG00000030269.15_113247633_113258159_2	chr6	+	782	3	ISM	ENSMUSG00000030269.15	ENSMUST00000129883.8	2531	18	32775	189	1123	2	3prime_fragment	FALSE	canonical	3	298	junction_1	46.5	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTTCATTAGCATTTC	9741	False	NA	15	True	AATAAA	-16	NA	113247632	113258159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_113247663_113254750_113254907_113257563
ENSMUSG00000030271.15_113303946_113310969_1	chr6	+	1356	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	13	180	0	23	multi-exon	FALSE	canonical	3	196	junction_2	21.4534379529249	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACCCCTAAGTCTCAAGTC	2321	False	NA	NA	False	NA	NA	NA	113303945	113310969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ENSMUSG00000030271.15_113304192_113311149_2	chr6	+	1290	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	259	0	120	0	multi-exon	FALSE	canonical	3	196	junction_2	21.4534379529249	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGTGAAGAGTGAGAGGG	2567	False	NA	14	True	AATAAA	-23	NA	113304191	113311149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ENSMUSG00000030272.16_113303946_113311149_1	chr6	-	1385	6	NIC	ENSMUSG00000030272.16	novel	2398	2	NA	NA	2433	7139	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCCTCTTCCTCCGGAC	NA	False	NA	NA	False	NA	NA	NA	113311149	113303945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310591_113310642_113310802
ENSMUSG00000030272.16_113303946_113311149_2	chr6	-	1619	7	NIC	ENSMUSG00000030272.16	novel	1486	11	NA	NA	2433	7139	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCCTCTTCCTCCGGAC	NA	False	NA	NA	False	NA	NA	NA	113311149	113303945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_113304324_113305325_113305574_113306106_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ENSMUSG00000030279.16_142956654_143045821_1	chr6	-	4425	27	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_4	21.2642225290113	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCTAACTCTTTGCCT	NA	False	NA	NA	False	AATAAA	-16	NA	143045821	142956653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ENSMUSG00000030282.15_142702697_142721440_1	chr6	+	1475	8	FSM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	285	0	196	0	multi-exon	FALSE	canonical	3	681	junction_7	54.6573743554204	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTACTGTAAGACCT	NA	False	NA	33	True	AATAAA	-22	NA	142702696	142721440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
ENSMUSG00000030284.12_113460521_113470304_1	chr6	+	2048	10	FSM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	263	-5	137	0	multi-exon	FALSE	canonical	3	165	junction_1	17.0945085399441	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCAGTCTTAACAACCCA	1720	False	NA	18	True	AATAAA	-24	NA	113460520	113470304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ENSMUSG00000030291.13_146544078_146551970_1	chr6	+	651	4	FSM	ENSMUSG00000030291.13	ENSMUST00000032429.9	814	4	33	130	0	-130	multi-exon	FALSE	canonical	3	254	junction_3	35.4902177445498	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGACTCATCTTCAAACA	NA	False	NA	-94	True	AGTAAA	-16	NA	146544077	146551970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_146544151_146549662_146549778_146550647_146550749_146551608
ENSMUSG00000030298.11_113705023_113717688_1	chr6	-	1334	9	NNC	ENSMUSG00000030298.11	novel	1353	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	353.554716416003	3881	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCATCCCACACAGTGAG	5	True	NA	-10	True	AATAAA	-23	NA	113717688	113705022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_113705425_113706556_113706704_113707295_113707420_113707734_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714953_113717601
ENSMUSG00000030298.11_113705023_113717688_2	chr6	-	1336	9	NNC	ENSMUSG00000030298.11	novel	1353	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	352.200382417453	3883	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCATCCCACACAGTGAG	5	True	NA	-10	True	AATAAA	-23	NA	113717688	113705022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_113705425_113706556_113706704_113707295_113707415_113707730_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
ENSMUSG00000030298.11_113705023_113717688_3	chr6	-	1156	8	NNC	ENSMUSG00000030298.11	novel	1353	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	374.229003337229	361	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCATCCCACACAGTGAG	5	True	NA	-10	True	AATAAA	-23	NA	113717688	113705022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_113705425_113706556_113706704_113707295_113707420_113707734_113707869_113711506_113711616_113713336_113713449_113714914_113714960_113717605
ENSMUSG00000030298.11_113705023_113717688_4	chr6	-	1652	8	NIC	ENSMUSG00000030298.11	novel	1353	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	942	junction_7	83.0657472568985	3614	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCATCCCACACAGTGAG	5	True	NA	-10	True	AATAAA	-23	NA	113717688	113705022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_113705425_113706556_113706704_113707295_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
ENSMUSG00000030301.18_147377489_147534110_1	chr6	+	2339	13	FSM	ENSMUSG00000030301.18	ENSMUST00000032441.14	2459	13	120	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	9.07683253612673	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTGTCATGTTTTTG	NA	False	NA	17	True	AATAAA	-18	NA	147377488	147534110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_147377558_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
ENSMUSG00000030303.16_148081541_148113520_1	chr6	+	2858	14	NIC	ENSMUSG00000030303.16	novel	3395	13	NA	NA	132627	29264	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCCGGCGCACACGAAGA	NA	False	NA	NA	False	NA	NA	NA	148081540	148113520	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ENSMUSG00000030303.16_148082808_148113520_2	chr6	+	1702	15	NIC	ENSMUSG00000030303.16	novel	3395	13	NA	NA	133894	29264	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCCGGCGCACACGAAGA	NA	False	NA	NA	False	NA	NA	NA	148082807	148113520	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148107597_148107709_148108030_148108174_148113467
ENSMUSG00000030303.16_148082808_148113520_3	chr6	+	1591	14	NIC	ENSMUSG00000030303.16	novel	3395	13	NA	NA	133894	29264	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCCGGCGCACACGAAGA	NA	False	NA	NA	False	NA	NA	NA	148082807	148113520	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ENSMUSG00000030303.16_148082808_148113520_5	chr6	+	1561	14	NIC	ENSMUSG00000030303.16	novel	3395	13	NA	NA	133894	29264	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCCGGCGCACACGAAGA	NA	False	NA	NA	False	NA	NA	NA	148082807	148113520	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_148083238_148083385_148083469_148084543_148084707_148089530_148089599_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ENSMUSG00000030304.12_148082808_148113520_1	chr6	-	1520	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_9	251.686423065599	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAGATGTCAGAATAAAA	NA	False	NA	-65	True	GATAAA	-25	NA	148113520	148082807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ENSMUSG00000030314.17_114620079_114836185_1	chr6	+	2403	20	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	29.4466041008941	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	6	True	NA	NA	NA	114620078	114836185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_114620112_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUSG00000030314.17_114620079_114836185_2	chr6	+	2350	19	FSM	ENSMUSG00000030314.17	ENSMUST00000032457.17	3761	19	21	1390	0	0	multi-exon	FALSE	canonical	3	23	junction_1	29.6327313191359	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	6	True	NA	NA	NA	114620078	114836185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUSG00000030316.14_114981349_115014821_1	chr6	-	1132	8	NNC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	161.980094519074	1086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCTTGTCACTCTG	NA	False	NA	-41	True	AATAAA	-18	NA	115014821	114981348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011924_115012095_115014610
ENSMUSG00000030316.14_114981349_115014821_2	chr6	-	1240	9	NIC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	189.765480264457	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCTTGTCACTCTG	NA	False	NA	-41	True	AATAAA	-18	NA	115014821	114981348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011116_115011212_115011911_115012095_115014610
ENSMUSG00000030316.14_115006534_115014821_1	chr6	-	978	4	NNC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	-5	1705	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	209.587425407368	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGATGATGATATGTGA	NA	False	NA	NA	False	NA	NA	NA	115014821	115006533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_115007025_115009180_115009274_115011911_115012095_115014610
ENSMUSG00000030319.9_115782473_115785514_1	chr6	+	651	4	NNC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	30974	2996	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	38974	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCCGGAGCAGCGCCAG	7886	False	NA	NA	False	NA	NA	NA	115782472	115785514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_115782650_115783946_115784129_115784762_115784864_115785323
ENSMUSG00000030319.9_115782473_115785708_1	chr6	+	475	4	NNC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	30974	3190	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	8698	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGGCGGCGGCGCGCAAG	7886	False	NA	NA	False	AAAACA	-42	NA	115782472	115785708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_115782650_115783981_115784129_115784762_115784864_115785658
ENSMUSG00000030319.9_115782473_115785708_2	chr6	+	470	4	NNC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	30974	3190	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	13857	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGGCGGCGGCGCGCAAG	7886	False	NA	NA	False	AAAACA	-42	NA	115782472	115785708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_115782650_115783946_115784129_115784802_115784864_115785658
ENSMUSG00000030319.9_115782473_115785708_3	chr6	+	510	4	NIC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	30974	3190	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	210312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGGCGGCGGCGCGCAAG	7886	False	NA	NA	False	AAAACA	-42	NA	115782472	115785708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_115782650_115783946_115784129_115784762_115784864_115785658
ENSMUSG00000030319.9_115782473_115785708_4	chr6	+	489	4	NNC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	30974	3190	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	137437	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGGCGGCGGCGCGCAAG	7886	False	NA	NA	False	AAAACA	-42	NA	115782472	115785708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_115782650_115783946_115784129_115784762_115784864_115785679
ENSMUSG00000030319.9_115782473_115785708_5	chr6	+	490	4	NNC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	30974	3190	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	52709	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGGCGGCGGCGCGCAAG	7886	False	NA	NA	False	AAAACA	-42	NA	115782472	115785708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_115782650_115783966_115784129_115784762_115784864_115785658
ENSMUSG00000030319.9_115782473_115785708_6	chr6	+	423	4	NNC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	30974	3190	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4255	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGGCGGCGGCGCGCAAG	7886	False	NA	NA	False	AAAACA	-42	NA	115782472	115785708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_115782650_115784033_115784129_115784762_115784864_115785658
ENSMUSG00000030319.9_115782473_115785708_7	chr6	+	494	4	NNC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	30974	3190	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	160568	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGGCGGCGGCGCGCAAG	7886	False	NA	NA	False	AAAACA	-42	NA	115782472	115785708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_115782634_115783946_115784129_115784762_115784864_115785658
ENSMUSG00000030330.16_125016811_125025965_1	chr6	+	1188	7	NIC	ENSMUSG00000030330.16	novel	1446	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_2	40.4533338826632	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	7119	False	NA	8	True	AATAAA	-15	NA	125016810	125025965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_125016861_125020916_125020989_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUSG00000030330.16_125016811_125025965_2	chr6	+	1246	8	NIC	ENSMUSG00000030330.16	novel	1446	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	45.7571227866688	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	7119	False	NA	8	True	AATAAA	-15	NA	125016810	125025965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024864_125024904_125025138_125025201_125025330
ENSMUSG00000030330.16_125016811_125025965_3	chr6	+	1560	7	ISM	ENSMUSG00000108037.3	ENSMUST00000140883.7	3181	10	3	2497	3	-2497	5prime_fragment	FALSE	canonical	3	91	junction_4	20.4857674170793	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	7119	False	NA	8	True	AATAAA	-15	NA	125016810	125025965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024904_125025138_125025201_125025330
ENSMUSG00000030330.16_125016811_125026228_2	chr6	+	1823	7	ISM	ENSMUSG00000108037.3	ENSMUST00000140883.7	3181	10	3	2234	3	-2234	5prime_fragment	FALSE	canonical	3	91	junction_4	20.4857674170793	899	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGCGGTGATAGT	7119	False	NA	7	True	AATAAA	-17	NA	125016810	125026228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024904_125025138_125025201_125025330
ENSMUSG00000030330.16_125016811_125026228_3	chr6	+	1509	8	NIC	ENSMUSG00000030330.16	novel	1487	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	45.7571227866688	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGCGGTGATAGT	7119	False	NA	7	True	AATAAA	-17	NA	125016810	125026228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024864_125024904_125025138_125025201_125025330
ENSMUSG00000030330.16_125016811_125026228_7	chr6	+	1451	7	NIC	ENSMUSG00000030330.16	novel	1629	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_2	40.4533338826632	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGCGGTGATAGT	7119	False	NA	7	True	AATAAA	-17	NA	125016810	125026228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_125016861_125020916_125020989_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUSG00000030330.16_125022367_125135470_1	chr6	+	208	2	NNC	ENSMUSG00000030330.16	novel	2294	2	NA	NA	-118	109242	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTAAATTTTATTATTAT	NA	False	NA	NA	False	NA	NA	NA	125022366	125135470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125022465_125135360
ENSMUSG00000030330.16_125022367_125160350_1	chr6	+	207	2	NNC	ENSMUSG00000030330.16	novel	2294	2	NA	NA	-118	134122	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	22006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCCTTCTTTCTTATTC	NA	False	NA	NA	False	NA	NA	NA	125022366	125160350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125022519_125160295
ENSMUSG00000030335.7_125168764_125170521_1	chr6	+	1080	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	-364	2711	0	0	multi-exon	FALSE	canonical	3	716	junction_1	10	3451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCTGCCTCGTTCCTAAG	NA	False	NA	49	True	NA	NA	NA	125168763	125170521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_125169397_125169478_125169590_125170185
ENSMUSG00000030335.7_125169180_125170521_1	chr6	+	664	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	52	2711	0	0	multi-exon	FALSE	canonical	3	716	junction_1	10	3113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCTGCCTCGTTCCTAAG	NA	False	NA	49	True	NA	NA	NA	125169179	125170521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_125169397_125169478_125169590_125170185
ENSMUSG00000030342.9_125437552_125471754_1	chr6	-	905	8	FSM	ENSMUSG00000030342.9	ENSMUST00000032492.9	1228	8	0	323	0	0	multi-exon	FALSE	canonical	3	5197	junction_4	437.363109779412	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAGTATTCATTATGCA	9966	False	NA	NA	False	NA	NA	NA	125471754	125437551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000030346.17_126900378_126912971_1	chr6	-	1774	8	ISM	ENSMUSG00000030346.17	ENSMUST00000112220.8	2233	9	3579	365	3538	0	3prime_fragment	FALSE	canonical	3	81	junction_4	59.3485037550163	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	8844	False	NA	-5	True	AATAAA	-21	NA	126912971	126900377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911676_126911813_126912915
ENSMUSG00000030346.17_126900378_126916509_1	chr6	-	1882	9	NNC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	85.1909619619358	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5306	False	NA	-5	True	AATAAA	-21	NA	126916509	126900377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_126901304_126901880_126902083_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ENSMUSG00000030346.17_126900378_126916550_1	chr6	-	1869	9	NNC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	86.7294644281861	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5265	False	NA	-5	True	AATAAA	-21	NA	126916550	126900377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_126901304_126901880_126902031_126903321_126903475_126904496_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ENSMUSG00000030346.17_126900642_126916550_1	chr6	-	1604	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112220.8	2233	9	0	629	0	-264	multi-exon	FALSE	canonical	3	81	junction_4	57.8721651573535	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGCTCATTGATACCAT	5265	False	NA	-18	True	AATAAA	-16	NA	126916550	126900641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ENSMUSG00000030347.7_126916938_126952583_1	chr6	+	2145	14	FSM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	9	347	0	6	multi-exon	FALSE	canonical	3	74	junction_10	14.682034265643	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATGTGAAAATGTTTTT	NA	False	NA	NA	False	TATAAA	-1	NA	126916937	126952583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_126916990_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
ENSMUSG00000030357.11_128407066_128415640_1	chr6	-	2212	10	NNC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1756.62783708579	5642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTGTCAGGCAACCCT	9269	False	NA	-21	True	AATAAA	-16	NA	128415640	128407065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412815_128413532_128413678_128415368
ENSMUSG00000030357.11_128407066_128415640_2	chr6	-	2211	10	NNC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1764.50610723486	5366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTGTCAGGCAACCCT	9269	False	NA	-21	True	AATAAA	-16	NA	128415640	128407065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410567_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ENSMUSG00000030357.11_128407628_128415640_1	chr6	-	1650	10	NNC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	0	-562	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1756.62783708579	2470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTTTGGATGATGGCT	9269	False	NA	NA	False	NA	NA	NA	128415640	128407627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412815_128413532_128413678_128415368
ENSMUSG00000030357.11_128407628_128415640_2	chr6	-	1649	10	NNC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	0	-562	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1764.50610723486	2100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTTTGGATGATGGCT	9269	False	NA	NA	False	NA	NA	NA	128415640	128407627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410567_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ENSMUSG00000030359.15_128460530_128464862_1	chr6	-	615	7	ISM	ENSMUSG00000030359.15	ENSMUST00000112132.8	4681	36	38821	0	-44	0	3prime_fragment	FALSE	canonical	3	30	junction_1	17.1464281994822	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTTTTCCTTTTT	NA	False	NA	5	True	AATAAA	-20	NA	128464862	128460529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_128460690_128461826_128461869_128462520_128462624_128463080_128463150_128463855_128463947_128464365_128464497_128464843
ENSMUSG00000030359.15_128460530_128464862_2	chr6	-	702	7	NIC	ENSMUSG00000030359.15	novel	4681	36	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_6	23.8799078725191	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTTTTCCTTTTT	NA	False	NA	5	True	AATAAA	-20	NA	128464862	128460529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_128460690_128461826_128461869_128462520_128462624_128463080_128463150_128463855_128463947_128464365_128464497_128464756
ENSMUSG00000030386.20_12212290_12226903_1	chr7	+	1419	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	70	3259	0	-2577	multi-exon	FALSE	canonical	3	94	junction_4	11.513277359447	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGGAGGAAACCAGTATGA	NA	False	NA	NA	False	NA	NA	NA	12212289	12226903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
ENSMUSG00000030386.20_12212290_12229492_1	chr7	+	4008	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	70	670	0	3	multi-exon	FALSE	canonical	3	94	junction_4	11.513277359447	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTACCTAATTCCTGT	NA	False	NA	24	True	AATAAA	-28	NA	12212289	12229492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
ENSMUSG00000030402.6_19010730_19013757_1	chr7	-	1416	5	FSM	ENSMUSG00000030402.6	ENSMUST00000032560.6	1648	5	232	0	-231	0	multi-exon	FALSE	canonical	3	13	junction_1	5.35607132140714	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTCTTCGTTGTTGT	9787	False	NA	1	True	AATAAA	-17	NA	19013757	19010729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_19011135_19011874_19011936_19012009_19012116_19012194_19012313_19013031
ENSMUSG00000030403.10_18990854_19005572_1	chr7	-	1606	11	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	170	0	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_8	402.203443545676	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005572	18990853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994796_18998450_18998496_18998578_18998751_19005438
ENSMUSG00000030403.10_18990854_19005572_2	chr7	-	2045	13	FSM	ENSMUSG00000030403.10	ENSMUST00000032561.9	2215	13	170	0	170	0	multi-exon	TRUE	canonical	3	1236	junction_9	117.461666323765	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005572	18990853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ENSMUSG00000030403.10_18990854_19005742_1	chr7	-	1776	11	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_8	402.203443545676	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005742	18990853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994796_18998450_18998496_18998578_18998751_19005438
ENSMUSG00000030407.3_18873627_18883216_1	chr7	-	2191	8	NNC	ENSMUSG00000030407.3	novel	2710	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.4741792017683	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTAAAAACCAAAAA	7204	False	NA	NA	False	NA	NA	NA	18883216	18873626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_18873757_18874275_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
ENSMUSG00000030417.16_35341437_35346905_1	chr7	-	608	6	NNC	ENSMUSG00000030417.16	novel	684	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	754.216308495116	4337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGTGTTTCAGAATCA	NA	False	NA	NA	False	AATAAA	-22	NA	35346905	35341436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_35341611_35342039_35342112_35343048_35343141_35343775_35343833_35345568_35345607_35346730
ENSMUSG00000030423.8_37962239_37970775_1	chr7	-	1277	8	NIC	ENSMUSG00000030423.8	novel	2113	7	NA	NA	-2	-819	combination_of_known_junctions	TRUE	canonical	2	9	junction_5	113.432709532289	1664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTCAAATTCCTGTACT	NA	False	NA	-4	True	AATAAA	-20	NA	37970775	37962238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_37962734_37963751_37963854_37965323_37965386_37965550_37965629_37966792_37967020_37968028_37968084_37968325_37968379_37970570
ENSMUSG00000030423.8_37962239_37970775_2	chr7	-	1202	6	NNC	ENSMUSG00000030423.8	novel	2113	7	NA	NA	-2	-819	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	105.356537528527	1594	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTCAAATTCCTGTACT	NA	False	NA	-4	True	AATAAA	-20	NA	37970775	37962238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_37962734_37963751_37963854_37965323_37965386_37965550_37965629_37966792_37967053_37970570
ENSMUSG00000030428.17_4128563_4137239_1	chr7	+	1307	11	ISM	ENSMUSG00000030428.17	ENSMUST00000206869.2	1491	13	1075	-1	-103	1	3prime_fragment	FALSE	canonical	3	27	junction_10	13.9513440212762	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCAGCTAGGTCCTTCTT	6324	False	NA	4	True	AATAAA	-19	NA	4128562	4137239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
ENSMUSG00000030432.13_4795989_4797561_1	chr7	+	553	5	NNC	ENSMUSG00000030432.13	novel	772	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	2852.82127901486	149046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2809	False	NA	17	True	AATAAA	-32	NA	4795988	4797561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_4795998_4796252_4796409_4796501_4796626_4797062_4797182_4797416
ENSMUSG00000030432.13_4795989_4797561_2	chr7	+	481	5	NNC	ENSMUSG00000030432.13	novel	1106	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2698.4830345029	68024	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2809	False	NA	17	True	AATAAA	-32	NA	4795988	4797561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797177_4797416
ENSMUSG00000030432.13_4795989_4797561_3	chr7	+	476	5	NNC	ENSMUSG00000030432.13	novel	1106	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_2	2732.29870027052	27624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2809	False	NA	17	True	AATAAA	-32	NA	4795988	4797561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_4795998_4796319_4796399_4796501_4796626_4797062_4797182_4797416
ENSMUSG00000030432.13_4795989_4797561_4	chr7	+	311	5	NNC	ENSMUSG00000030432.13	novel	1106	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2698.4830345029	5412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2809	False	NA	17	True	AATAAA	-32	NA	4795988	4797561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797114_4797523
ENSMUSG00000030432.13_4795989_4797561_5	chr7	+	481	5	NNC	ENSMUSG00000030432.13	novel	1106	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_3	2595.93128761144	68510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2809	False	NA	17	True	AATAAA	-32	NA	4795988	4797561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_4795998_4796319_4796409_4796501_4796626_4797067_4797182_4797416
ENSMUSG00000030432.13_4795989_4797561_6	chr7	+	472	5	NNC	ENSMUSG00000030432.13	novel	1106	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2698.4830345029	67893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2809	False	NA	17	True	AATAAA	-32	NA	4795988	4797561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797182_4797430
ENSMUSG00000030447.16_55491954_55580246_1	chr7	+	4201	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	135	2104	0	0	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTACCAGTTTCTTTTAA	NA	False	NA	5	True	NA	NA	NA	55491953	55580246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_55491954_55580446_1	chr7	+	4401	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	135	1904	0	200	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGTTTGTTCATTGG	NA	False	NA	11	True	AATAAA	-14	NA	55491953	55580446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030452.17_55581035_55612201_2	chr7	-	2978	7	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	69.789564644962	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGTTTCCCAGCCC	NA	False	NA	-20	True	AATAAA	-16	NA	55612201	55581034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55612143
ENSMUSG00000030452.17_55582315_55612201_1	chr7	-	1894	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	23	1280	-3	683	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCATCAATACCTCATCAT	NA	False	NA	NA	False	ATTAAA	-21	NA	55612201	55582314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ENSMUSG00000030452.17_55582315_55612201_2	chr7	-	1698	7	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	-3	683	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	69.789564644962	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCATCAATACCTCATCAT	NA	False	NA	NA	False	ATTAAA	-21	NA	55612201	55582314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55612143
ENSMUSG00000030452.17_55582998_55612201_1	chr7	-	1211	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	23	1963	-3	0	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATATATTATGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	55612201	55582997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ENSMUSG00000030471.18_48438780_48477188_1	chr7	+	2375	17	NNC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	73.427446120303	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAGTTTCTAATGCTTC	NA	False	NA	9	True	AATAAA	-20	NA	48438779	48477188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465205_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ENSMUSG00000030491.17_35193066_35235436_1	chr7	-	1486	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	1526	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_11	140.459223223075	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAGGCTACATTGCAGA	NA	False	NA	-42	True	AATAAA	-4	NA	35235436	35193065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35235309
ENSMUSG00000030491.17_35193066_35237170_1	chr7	-	1567	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	143.301623758773	1353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAGGCTACATTGCAGA	NA	False	NA	-42	True	AATAAA	-4	NA	35237170	35193065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223386_35223500_35228537_35228697_35236938
ENSMUSG00000030491.17_35193066_35237170_2	chr7	-	1586	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	139.635475849451	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAGGCTACATTGCAGA	NA	False	NA	-42	True	AATAAA	-4	NA	35237170	35193065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_35193363_35193695_35193757_35200819_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ENSMUSG00000030491.17_35196767_35237132_1	chr7	-	1999	11	Fusion	ENSMUSG00000030491.17_ENSMUSG00000100068.2	novel	769	6	NA	NA	-14	113	multi-exon	FALSE	canonical	3	19	junction_1	140.882362274346	129	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTGGTTAGTATTT	NA	False	NA	NA	False	NA	NA	NA	35237132	35196766	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr7_-_35197571_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ENSMUSG00000030493.14_35082625_35091714_1	chr7	-	2110	5	NNC	ENSMUSG00000030493.14	novel	1857	4	NA	NA	4419	8952	intron_retention	FALSE	non_canonical	0	0	junction_1	0	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGCCTCACAAACGAGGAA	NA	False	NA	NA	False	NA	NA	NA	35091714	35082624	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_35082820_35083393_35083471_35084062_35084210_35084751_35084908_35090179
ENSMUSG00000030494.14_35033755_35091714_1	chr7	+	3348	15	FSM	ENSMUSG00000030494.14	ENSMUST00000032705.13	3508	15	160	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	11.3992928531124	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTCTTTTGCTTT	NA	False	NA	26	True	AATAAA	-26	NA	35033754	35091714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
ENSMUSG00000030494.14_35052960_35091714_1	chr7	+	3364	15	NNC	ENSMUSG00000030494.14	novel	689	2	NA	NA	19205	0	intron_retention	FALSE	canonical	3	27	junction_1	23.30422139214	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTCTTTTGCTTT	NA	False	NA	26	True	AATAAA	-26	NA	35052959	35091714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_35053058_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
ENSMUSG00000030498.16_51512175_51644205_2	chr7	+	2313	10	NIC	ENSMUSG00000030498.16	novel	1857	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	14.8980071581387	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTATTTGTCTCTGTAT	1017	False	NA	5	True	ATTAAA	-22	NA	51512174	51644205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_51512394_51513745_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ENSMUSG00000030505.18_49428185_49508013_1	chr7	+	2416	16	FSM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	91	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	68.5528506579656	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAATGTTTTCATGAA	NA	False	NA	44	True	AATAAA	-28	NA	49428184	49508013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ENSMUSG00000030512.14_65710312_65724328_1	chr7	+	1015	9	FSM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	226	7	0	0	multi-exon	FALSE	canonical	3	2395	junction_6	274.913622798144	6152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGGACTGTGTGCTGTGT	NA	False	NA	16	True	AATAAA	-16	NA	65710311	65724328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65719866_65719947_65720337_65720414_65720979_65721074_65724069
ENSMUSG00000030523.19_63835207_63867865_1	chr7	+	2053	11	FSM	ENSMUSG00000030523.19	ENSMUST00000205731.2	2575	11	-96	618	0	-618	multi-exon	FALSE	canonical	3	82	junction_10	225.867682504603	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCAGAGTGGTACCTTGG	NA	False	NA	NA	False	AGTAAA	-14	NA	63835206	63867865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237
ENSMUSG00000030523.19_63835298_63861176_1	chr7	+	1824	10	FSM	ENSMUSG00000030523.19	ENSMUST00000205960.2	1992	10	169	-1	0	1	multi-exon	FALSE	canonical	3	724	junction_5	65.6911967719673	2276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACTGAGTTTTCAGACT	NA	False	NA	27	True	ATTAAA	-24	NA	63835297	63861176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ENSMUSG00000030523.19_63835298_63861176_2	chr7	+	1736	10	NNC	ENSMUSG00000030523.19	novel	2765	14	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_3	242.01882387763	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACTGAGTTTTCAGACT	NA	False	NA	27	True	ATTAAA	-24	NA	63835297	63861176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_63835372_63847024_63847105_63848910_63849019_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ENSMUSG00000030523.19_63835298_63861176_3	chr7	+	1652	9	NIC	ENSMUSG00000030523.19	novel	2765	14	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	271.883678022422	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACTGAGTTTTCAGACT	NA	False	NA	27	True	ATTAAA	-24	NA	63835297	63861176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ENSMUSG00000030530.16_80044159_80046257_1	chr7	-	233	2	NNC	ENSMUSG00000030530.16	novel	2778	4	NA	NA	-156	1589	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	24012	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGGAGCTGGGGACTG	9932	False	NA	NA	False	AATAAA	-35	NA	80046257	80044158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_80044295_80046160
ENSMUSG00000030533.17_79975044_79989949_1	chr7	-	3196	20	NIC	ENSMUSG00000030533.17	novel	3260	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_19	16.1947975641576	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATCTGTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	79989949	79975043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989861
ENSMUSG00000030533.17_79992869_79995850_1	chr7	-	1028	4	Genic_Genomic	ENSMUSG00000030533.17	novel	3685	23	NA	NA	-93	961	multi-exon	FALSE	non_canonical	0	0	junction_1	0	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGAAGCTTCGGAGTCC	NA	False	NA	NA	False	NA	NA	NA	79995850	79992868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_79992998_79993286_79993343_79993463_79993705_79995248
ENSMUSG00000030533.17_79992869_79995850_2	chr7	-	881	4	Genic_Genomic	ENSMUSG00000030533.17	novel	3685	23	NA	NA	-93	961	multi-exon	FALSE	non_canonical	0	0	junction_1	0	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGAAGCTTCGGAGTCC	NA	False	NA	NA	False	NA	NA	NA	79995850	79992868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_79992998_79993286_79993343_79993463_79993705_79995395
ENSMUSG00000030533.17_79992869_79995850_3	chr7	-	1087	4	Genic_Genomic	ENSMUSG00000030533.17	novel	3685	23	NA	NA	-93	961	multi-exon	FALSE	non_canonical	0	0	junction_1	0	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGAAGCTTCGGAGTCC	NA	False	NA	NA	False	NA	NA	NA	79995850	79992868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_79993204_79993286_79993343_79993463_79993705_79995395
ENSMUSG00000030536.11_80361331_80453042_1	chr7	-	7322	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	122	0	-13	0	multi-exon	FALSE	canonical	3	539	junction_37	55.7931586507513	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTATTTTTCTTGGTT	NA	False	NA	-9	True	AATAAA	-19	NA	80453042	80361330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ENSMUSG00000030536.11_80363324_80453042_1	chr7	-	5329	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	122	1993	-13	-1993	multi-exon	FALSE	canonical	3	539	junction_37	55.7931586507513	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTAAAGCCTCCTAA	NA	False	NA	NA	False	NA	NA	NA	80453042	80363323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ENSMUSG00000030538.16_79876907_79882372_1	chr7	-	841	7	NNC	ENSMUSG00000030538.16	novel	1047	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	296.27052202712	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2240	False	NA	-12	True	AATAAA	-15	NA	79882372	79876906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880164_79882087_79882127_79882257
ENSMUSG00000030541.17_79744598_79765080_1	chr7	-	2359	9	NIC	ENSMUSG00000030541.17	novel	1790	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1616	junction_4	183.33980575696	2279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTGATGTGTTT	NA	False	NA	-9	True	AAAAAG	-9	NA	79765080	79744597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ENSMUSG00000030541.17_79744777_79765080_1	chr7	-	1502	11	FSM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	60	183	0	0	multi-exon	FALSE	canonical	3	1495	junction_5	201.26112391617	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTTTTACATATATATA	NA	False	NA	NA	False	NA	NA	NA	79765080	79744776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ENSMUSG00000030549.7_79243111_79267304_1	chr7	-	1989	11	FSM	ENSMUSG00000030549.7	ENSMUST00000032766.5	2090	11	101	0	101	0	multi-exon	FALSE	canonical	2	10	junction_10	3.38969025133566	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGGGAGTGGATGTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	79267304	79243110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_79243549_79244529_79244737_79248288_79248363_79248717_79248843_79249104_79249242_79249426_79249565_79250241_79250409_79251334_79251483_79253487_79253639_79257292_79257480_79267087
ENSMUSG00000030556.14_67163160_67294955_1	chr7	-	2802	10	NIC	ENSMUSG00000030556.14	novel	2761	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	13.5026289164118	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGTCTTCTCTCCTCCT	596	False	NA	-4	True	AATAAA	-14	NA	67294955	67163159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209718_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ENSMUSG00000030556.14_67164154_67294955_1	chr7	-	1808	10	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	13.5026289164118	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTATAGAAAAAGAAGTTTT	596	False	NA	NA	False	ATTAAA	-20	NA	67294955	67164153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209718_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ENSMUSG00000030556.14_67164622_67294955_1	chr7	-	1228	9	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	0	-468	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	20.648471493067	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGTTGTCTTCTGTGT	596	False	NA	NA	False	AATACA	-17	NA	67294955	67164621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ENSMUSG00000030556.14_67164622_67294955_2	chr7	-	1340	10	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	0	-468	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	13.5026289164118	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGTTGTCTTCTGTGT	596	False	NA	NA	False	AATACA	-17	NA	67294955	67164621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209718_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ENSMUSG00000030560.18_87927342_87959520_1	chr7	+	1868	7	FSM	ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	49	576	0	-576	multi-exon	FALSE	canonical	3	323	junction_5	18.6100331362771	918	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGTCTTTCTATGTGTG	NA	False	NA	13	True	AATAAA	-18	NA	87927341	87959520	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_87927583_87930594_87930741_87946290_87946458_87948652_87948806_87951392_87951509_87957220_87957353_87958607
ENSMUSG00000030587.6_28937778_28946954_1	chr7	-	1277	8	NIC	ENSMUSG00000030587.6	novel	1466	4	NA	NA	809	8208	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1039	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAATGGGCCCGCCCGGT	2720	False	NA	NA	False	NA	NA	NA	28946954	28937777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_28938037_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUSG00000030587.6_28937778_28946954_2	chr7	-	1103	8	NNC	ENSMUSG00000030587.6	novel	1466	4	NA	NA	809	8208	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3672	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAATGGGCCCGCCCGGT	2720	False	NA	NA	False	NA	NA	NA	28946954	28937777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_28937871_28943502_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUSG00000030587.6_28937778_28946954_3	chr7	-	1097	8	NNC	ENSMUSG00000030587.6	novel	1466	4	NA	NA	809	8208	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3459	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAATGGGCCCGCCCGGT	2720	False	NA	NA	False	NA	NA	NA	28946954	28937777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945242_28945325_28945420_28946661
ENSMUSG00000030587.6_28937898_28946954_1	chr7	-	1157	8	NIC	ENSMUSG00000030587.6	novel	1466	4	NA	NA	809	8088	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	892	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGATCTCCTCAGCCAGC	2720	False	NA	NA	False	NA	NA	NA	28946954	28937897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_28938037_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUSG00000030588.13_28937778_28946954_1	chr7	+	946	7	NIC	ENSMUSG00000030588.13	novel	1126	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	581.164826495509	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6061	False	NA	12	True	AATAAA	-15	NA	28937777	28946954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945325_28945420_28946661
ENSMUSG00000030588.13_28937898_28946954_1	chr7	+	1109	8	NIC	ENSMUSG00000030588.13	novel	816	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	515.665569523346	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6181	False	NA	12	True	AATAAA	-15	NA	28937897	28946954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_28937989_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUSG00000030589.16_28837060_28851046_1	chr7	+	2042	16	ISM	ENSMUSG00000030589.16	ENSMUST00000094617.11	4617	17	2702	2318	2562	0	3prime_fragment	TRUE	non_canonical	0	0	junction_2	17.9245331567907	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGCCAGTCACACTCC	415	False	NA	20	True	AAAAAG	-19	NA	28837059	28851046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_28837151_28838235_28838346_28838468_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848572_28849223_28849261_28849346_28849482_28849603_28849717_28850870
ENSMUSG00000030589.16_28837060_28851046_2	chr7	+	2024	16	ISM	ENSMUSG00000030589.16	ENSMUST00000032811.12	4621	17	2702	2340	2562	0	3prime_fragment	FALSE	non_canonical	0	0	junction_2	15.5905954558082	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGCCAGTCACACTCC	415	False	NA	20	True	AAAAAG	-19	NA	28837059	28851046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848557_28849223_28849261_28849346_28849482_28849603_28849717_28850870
ENSMUSG00000030591.18_28873613_28879906_1	chr7	-	1299	8	NNC	ENSMUSG00000030591.18	novel	1391	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	623.512630184826	3792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGTGTATCCAGTCTG	NA	False	NA	-10	True	AATAAA	-15	NA	28879906	28873612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_28873787_28873807_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
ENSMUSG00000030591.18_28873613_28879940_1	chr7	-	1333	8	NNC	ENSMUSG00000030591.18	novel	1391	7	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	623.512630184826	5365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGTGTATCCAGTCTG	NA	False	NA	-10	True	AATAAA	-15	NA	28879940	28873612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_28873787_28873807_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
ENSMUSG00000030591.18_28873954_28879940_1	chr7	-	1013	7	FSM	ENSMUSG00000030591.18	ENSMUST00000182328.8	1391	7	37	341	-34	0	multi-exon	FALSE	canonical	3	1581	junction_5	143.933626678719	2504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCCGAGTCTCCCCAGT	NA	False	NA	-12	True	AATAAA	-18	NA	28879940	28873953	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
ENSMUSG00000030595.16_28458457_28465939_2	chr7	-	767	5	NNC	ENSMUSG00000030595.16	novel	1243	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	243.395768245876	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTTCCTGCTTATTT	NA	False	NA	1	True	AATAAA	-33	NA	28465939	28458456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461182_28465859
ENSMUSG00000030598.16_28432456_28437569_1	chr7	+	1222	4	ISM	ENSMUSG00000030598.16	ENSMUST00000108279.9	1563	7	16158	0	531	0	3prime_fragment	FALSE	canonical	3	40	junction_3	48.5615302705982	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	28432455	28437569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_28432966_28434701_28434798_28435492_28435629_28437089
ENSMUSG00000030603.17_27741132_27749481_1	chr7	-	870	8	NNC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_5	822.24290070216	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27749481	27741131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742282_27748271_27748405_27748528_27748628_27749407
ENSMUSG00000030603.17_27741132_27749481_2	chr7	-	1537	10	NIC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	2113	junction_4	111.139329750021	1684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27749481	27741131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_27741346_27741525_27741582_27741763_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ENSMUSG00000030603.17_27741132_27749481_3	chr7	-	1389	11	NNC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_3	700.744182994051	6856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27749481	27741131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_27741346_27741525_27741582_27741763_27741933_27742080_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ENSMUSG00000030603.17_27741132_27749481_4	chr7	-	1387	11	NNC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	707.165581741645	5457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27749481	27741131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746700_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ENSMUSG00000030603.17_27741132_27749481_5	chr7	-	116	2	NNC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27749481	27741131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_27741174_27749407
ENSMUSG00000030603.17_27741132_27749481_6	chr7	-	1390	11	NNC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_7	700.645017109235	7099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27749481	27741131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746703_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ENSMUSG00000030606.9_78766768_78780744_1	chr7	-	1418	5	FSM	ENSMUSG00000030606.9	ENSMUST00000206092.2	3358	5	22	1918	-1	0	multi-exon	FALSE	canonical	2	5	junction_4	1.87082869338697	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTAATTCTCCTGGCAT	2297	False	NA	NA	False	NA	NA	NA	78780744	78766767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_78767242_78767596_78767900_78771394_78771764_78773117_78773300_78780654
ENSMUSG00000030611.11_78433104_78442737_1	chr7	+	819	6	FSM	ENSMUSG00000030611.11	ENSMUST00000032840.5	1056	6	237	0	0	0	multi-exon	FALSE	canonical	3	364	junction_2	39.2153031353833	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	78433103	78442737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384_78440515_78441621_78441688_78442389
ENSMUSG00000030612.7_78425089_78432837_1	chr7	-	1029	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	0	105	0	-105	multi-exon	FALSE	canonical	3	446	junction_2	24.7296493213219	1860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATTTGTCCTTGGTGG	NA	False	NA	-5	True	ATTAAA	-22	NA	78432837	78425088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
ENSMUSG00000030613.14_92210703_92231287_1	chr7	+	1035	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	346	215	346	-215	multi-exon	FALSE	canonical	3	146	junction_4	17.8658193207029	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGTAAATGAAGTTGGA	NA	False	NA	NA	False	AATAAA	-16	NA	92210702	92231287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
ENSMUSG00000030613.14_92210703_92231502_1	chr7	+	1250	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	346	0	346	0	multi-exon	FALSE	canonical	3	146	junction_4	17.8658193207029	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTGTAAATGTGTTAT	NA	False	NA	10	True	AATAAA	-18	NA	92210702	92231502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
ENSMUSG00000030613.14_92210703_92231502_2	chr7	+	1231	8	NNC	ENSMUSG00000030613.14	novel	1596	9	NA	NA	346	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	65.1018041067925	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTGTAAATGTGTTAT	NA	False	NA	10	True	AATAAA	-18	NA	92210702	92231502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
ENSMUSG00000030614.9_90113243_90125203_1	chr7	-	714	6	NNC	ENSMUSG00000030614.9	novel	2259	5	NA	NA	0	3403	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	127.099016518618	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGTCATAGTCTCT	6026	False	NA	NA	False	NA	NA	NA	90125203	90113242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_90113377_90117949_90118001_90118777_90118890_90119972_90120167_90121805_90121928_90125102
ENSMUSG00000030614.9_90118031_90125203_1	chr7	-	868	5	FSM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	6	1385	0	1100	multi-exon	FALSE	canonical	3	210	junction_1	24.1389208540896	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTCTTTCTTTCTTCA	6026	False	NA	NA	False	TATAAA	-17	NA	90125203	90118030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805_90121928_90125102
ENSMUSG00000030615.13_90099908_90106416_1	chr7	-	866	6	NNC	ENSMUSG00000030615.13	novel	799	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_5	375.952656593885	2365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAACATTAAAATACTT	1666	False	NA	NA	False	AATAAA	-19	NA	90106416	90099907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_90100144_90100750_90100866_90101914_90102109_90104631_90104728_90105779_90105868_90106279
ENSMUSG00000030619.11_89603868_89629695_1	chr7	-	1565	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	215	-277	-26	0	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	3541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTAACTCTAGAAAGCT	NA	False	NA	-8	True	AATAAA	-27	NA	89629695	89603867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUSG00000030619.11_89603868_89629695_2	chr7	-	1476	12	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	461	junction_2	565.94251087883	1647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTAACTCTAGAAAGCT	NA	False	NA	-8	True	AATAAA	-27	NA	89629695	89603867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUSG00000030619.11_89603868_89629767_1	chr7	-	1548	12	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	461	junction_2	565.94251087883	3180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTAACTCTAGAAAGCT	NA	False	NA	-8	True	AATAAA	-27	NA	89629767	89603867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUSG00000030619.11_89603868_89629767_2	chr7	-	1637	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	143	-277	0	0	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	3652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTAACTCTAGAAAGCT	NA	False	NA	-8	True	AATAAA	-27	NA	89629767	89603867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUSG00000030619.11_89613802_89629767_1	chr7	-	1029	8	ISM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	143	9657	0	0	5prime_fragment	FALSE	canonical	3	2155	junction_7	201.039340245959	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTTTTCAATCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	89629767	89613801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUSG00000030629.16_84264262_84328600_1	chr7	-	1504	7	FSM	ENSMUSG00000030629.16	ENSMUST00000208782.2	624	7	4	-884	0	0	multi-exon	FALSE	canonical	2	8	junction_6	247.556503090148	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	84328600	84264261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84328551
ENSMUSG00000030629.16_84264262_84339091_1	chr7	-	1754	8	FSM	ENSMUSG00000030629.16	ENSMUST00000209165.2	967	8	0	-787	0	0	multi-exon	FALSE	canonical	3	64	junction_6	270.713795702534	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	84339091	84264261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84302089_84302251_84338953
ENSMUSG00000030630.17_84234367_84254994_1	chr7	-	1429	14	FSM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	156	0	-57	0	multi-exon	FALSE	canonical	3	97	junction_9	7.3524942432914	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTCTTGGTTTTAGC	NA	False	NA	-4	True	AATAAA	-32	NA	84254994	84234366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288_84251400_84254850
ENSMUSG00000030638.14_81889332_81956627_1	chr7	+	1523	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-30762	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	122.938437337555	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGTTATTTTCAATGTC	NA	False	NA	17	True	AATAAA	-24	NA	81889331	81956627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_81889439_81909339_81909409_81917487_81917561_81919987_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ENSMUSG00000030638.14_81889332_81956627_2	chr7	+	1530	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-30762	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	100.011249367259	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGTTATTTTCAATGTC	NA	False	NA	17	True	AATAAA	-24	NA	81889331	81956627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_81889439_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ENSMUSG00000030641.11_92506733_92523445_1	chr7	-	3464	7	FSM	ENSMUSG00000030641.11	ENSMUST00000208356.2	840	7	0	-2624	0	0	multi-exon	FALSE	canonical	3	86	junction_4	58.4648517392193	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTTGTTATAATTT	NA	False	NA	-1	True	AGTAAA	-18	NA	92523445	92506732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92517319_92517407_92521969_92522053_92523348
ENSMUSG00000030643.15_92390811_92485855_1	chr7	+	1568	5	FSM	ENSMUSG00000030643.15	ENSMUST00000032879.15	9456	5	0	7888	0	0	multi-exon	FALSE	canonical	3	12	junction_3	4.32290411644765	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTCAGCAGTCTTCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	92390810	92485855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_92391051_92469190_92469292_92473005_92473090_92478733_92478918_92484896
ENSMUSG00000030643.15_92390875_92485734_1	chr7	+	1383	5	FSM	ENSMUSG00000030643.15	ENSMUST00000032879.15	9456	5	64	8009	0	-118	multi-exon	FALSE	canonical	3	12	junction_3	4.32290411644765	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAAGCTCCATGACTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	92390874	92485734	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_92391051_92469190_92469292_92473005_92473090_92478733_92478918_92484896
ENSMUSG00000030643.15_92390875_92485855_1	chr7	+	1504	5	FSM	ENSMUSG00000030643.15	ENSMUST00000032879.15	9456	5	64	7888	0	0	multi-exon	FALSE	canonical	3	12	junction_3	4.32290411644765	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTCAGCAGTCTTCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	92390874	92485855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_92391051_92469190_92469292_92473005_92473090_92478733_92478918_92484896
ENSMUSG00000030647.9_97049310_97057009_1	chr7	+	569	3	NNC	ENSMUSG00000030647.9	novel	683	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1082	10729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCTTTCCTGGTTCTGC	NA	False	NA	21	True	ATTAAA	-20	NA	97049309	97057009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_97049565_97056086_97056217_97056825
ENSMUSG00000030649.19_101545623_101548745_1	chr7	+	788	6	NNC	ENSMUSG00000030649.19	novel	3103	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	219.67922068325	1020	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAATGTCTATTCCCTG	7825	False	NA	19	True	AATAAA	-19	NA	101545622	101548745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_101545658_101546944_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUSG00000030649.19_101545623_101548745_2	chr7	+	703	5	NIC	ENSMUSG00000030649.19	novel	650	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	238.26600156128	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAATGTCTATTCCCTG	7825	False	NA	19	True	AATAAA	-19	NA	101545622	101548745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_101545658_101547153_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUSG00000030649.19_101545623_101548745_3	chr7	+	763	6	NIC	ENSMUSG00000030649.19	novel	3103	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	220.710670335623	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAATGTCTATTCCCTG	7825	False	NA	19	True	AATAAA	-19	NA	101545622	101548745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_101545658_101546939_101546995_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUSG00000030649.19_101545623_101548745_4	chr7	+	944	5	NIC	ENSMUSG00000030649.19	novel	937	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	98	junction_2	210.842802817644	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAATGTCTATTCCCTG	7825	False	NA	19	True	AATAAA	-19	NA	101545622	101548745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_101545658_101546939_101547025_101547153_101547279_101547760_101547821_101548106
ENSMUSG00000030649.19_101545623_101548745_5	chr7	+	784	6	NIC	ENSMUSG00000030649.19	novel	3103	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	24	junction_5	215.24553421616	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAATGTCTATTCCCTG	7825	False	NA	19	True	AATAAA	-19	NA	101545622	101548745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548236_101548400
ENSMUSG00000030649.19_101545623_101551056_1	chr7	+	3260	5	FSM	ENSMUSG00000030649.19	ENSMUST00000032884.16	937	5	-12	-2311	0	0	multi-exon	FALSE	canonical	3	304	junction_1	120.728000066265	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTCCAGACTCCTC	7825	False	NA	10	True	NA	NA	NA	101545622	101551056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106
ENSMUSG00000030654.10_117719523_117728797_1	chr7	-	674	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	88	1409	0	0	multi-exon	FALSE	canonical	3	2173	junction_1	168.469106960297	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTAGTGTGGCTGCCGC	NA	False	NA	NA	False	GATAAA	-30	NA	117728797	117719522	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ENSMUSG00000030662.11_121148645_121184278_1	chr14	+	3376	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	9	1133	0	-552	multi-exon	FALSE	canonical	3	890	junction_17	126.92017018583	1672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTCTTTGTTTTGTTTTT	1840	False	NA	10	True	AATAAA	-19	NA	121148644	121184278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ENSMUSG00000030662.11_121148645_121184830_1	chr14	+	3928	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	9	581	0	0	multi-exon	FALSE	canonical	3	890	junction_17	126.92017018583	2773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGTGTAGAACTTCAGT	1840	False	NA	18	True	AATAAA	-20	NA	121148644	121184830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ENSMUSG00000030663.13_115692601_115703917_1	chr7	+	886	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	65	528	0	-149	multi-exon	FALSE	canonical	3	1664	junction_2	78.2527954772224	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCATCATCTGCCCTC	NA	False	NA	13	True	AATAAA	-23	NA	115692600	115703917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
ENSMUSG00000030663.13_115692601_115704316_1	chr7	+	1285	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	65	129	0	-126	multi-exon	FALSE	canonical	3	1664	junction_2	78.2527954772224	3409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCTCTGCTCATTTAG	NA	False	NA	10	True	GATAAA	-26	NA	115692600	115704316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
ENSMUSG00000030663.13_115692601_115704445_1	chr7	+	616	5	NNC	ENSMUSG00000030663.13	novel	1479	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	758.133357332336	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	False	NA	29	True	AATAAA	-20	NA	115692600	115704445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702502_115704190
ENSMUSG00000030669.14_114230713_114235544_1	chr7	-	970	5	NIC	ENSMUSG00000030669.14	novel	994	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	37.532485928859	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGTCTTTGCTGTTACT	2082	False	NA	0	True	ATTAAA	-27	NA	114235544	114230712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_114231141_114231650_114231835_114233702_114233844_114234361_114234457_114235422
ENSMUSG00000030672.13_126808062_126813460_1	chr7	+	777	8	NIC	ENSMUSG00000030672.13	novel	653	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	59	junction_2	781.490099431979	4480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	242	False	NA	32	True	AATAAA	-24	NA	126808061	126813460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_126808124_126808455_126808571_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ENSMUSG00000030672.13_126811851_126813460_1	chr7	+	782	6	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1071	10	0	0	3prime_fragment	FALSE	canonical	3	600	junction_1	477.333007448678	4561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	4031	False	NA	32	True	AATAAA	-24	NA	126811850	126813460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ENSMUSG00000030672.13_126811851_126813460_2	chr7	+	629	7	NIC	ENSMUSG00000030672.13	novel	268	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	184	junction_1	671.232365793612	4423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	4031	False	NA	32	True	AATAAA	-24	NA	126811850	126813460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_126811880_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ENSMUSG00000030672.13_126812286_126813460_1	chr7	+	558	5	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1506	10	0	0	3prime_fragment	FALSE	canonical	3	1768	junction_4	19.9311314279947	3346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	4466	False	NA	32	True	AATAAA	-24	NA	126812285	126813460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ENSMUSG00000030677.9_126626901_126641643_1	chr7	-	2243	13	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	712	junction_7	45.9422191453569	2120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGGTTTTTGAGG	7925	False	NA	-4	True	AATACA	-15	NA	126641643	126626900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ENSMUSG00000030677.9_126626901_126641643_2	chr7	-	2090	15	NNC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	203.933712719779	2097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGGTTTTTGAGG	7925	False	NA	-4	True	AATACA	-15	NA	126641643	126626900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631867_126631893_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ENSMUSG00000030681.19_126586032_126589016_1	chr7	-	987	5	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	24777	0	22021	0	3prime_fragment	FALSE	canonical	3	108	junction_4	10.7004672795163	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTTTCCCTCTTAT	6008	False	NA	0	True	AATAAA	-21	NA	126589016	126586031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717
ENSMUSG00000030689.16_126451605_126461032_2	chr7	-	1235	8	NNC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	382.069338722485	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9172	False	NA	-4	True	ATTAAA	-15	NA	126461032	126451604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_126452164_126452660_126452753_126456397_126456515_126456847_126456956_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ENSMUSG00000030689.16_126451605_126461032_3	chr7	-	1096	7	FSM	ENSMUSG00000030689.16	ENSMUST00000153764.8	719	7	-128	-249	0	0	multi-exon	FALSE	canonical	3	53	junction_2	323.952156961487	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9172	False	NA	-4	True	ATTAAA	-15	NA	126461032	126451604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126452164_126456397_126456464_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ENSMUSG00000030689.16_126451605_126461032_4	chr7	-	1141	7	NNC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_4	336.784797756668	1210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9172	False	NA	-4	True	ATTAAA	-15	NA	126461032	126451604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457119_126460411_126460465_126460647_126460719_126460876
ENSMUSG00000030689.16_126451605_126461032_5	chr7	-	1138	7	NNC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	333.021729354441	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9172	False	NA	-4	True	ATTAAA	-15	NA	126461032	126451604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_126452164_126456397_126456515_126456847_126456951_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ENSMUSG00000030695.17_126394406_126398355_1	chr7	-	1435	9	NNC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_8	6677.90096956933	13914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398355	126394405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396944_126398216
ENSMUSG00000030697.8_126385038_126391669_1	chr7	-	1351	9	NNC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	75	junction_2	839.978041007621	4302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGTTCTGTCAGGTTTG	5069	False	NA	NA	False	AATAAA	-15	NA	126391669	126385037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_126385464_126385543_126385725_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
ENSMUSG00000030697.8_126385038_126391669_3	chr7	-	1354	9	NNC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	858.12568281109	4301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGTTCTGTCAGGTTTG	5069	False	NA	NA	False	AATAAA	-15	NA	126391669	126385037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388201_126388248_126391232_126391396_126391594
ENSMUSG00000030704.15_100198327_100256845_1	chr7	+	884	8	NIC	ENSMUSG00000030704.15	novel	3214	8	NA	NA	-58290	-31725	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGGGATTGCTGGCGAA	NA	False	NA	NA	False	NA	NA	NA	100198326	100256845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100256764
ENSMUSG00000030706.18_100197916_100232309_1	chr7	-	1327	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	0	2958	0	0	multi-exon	FALSE	canonical	3	320	junction_4	76.5855530682877	2504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGTATTGGTCTATT	NA	False	NA	NA	False	NA	NA	NA	100232309	100197915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
ENSMUSG00000030706.18_100198327_100232309_1	chr7	-	739	5	NIC	ENSMUSG00000030706.18	novel	4285	8	NA	NA	0	117	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	218.635970279366	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTTTGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	100232309	100198326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100232196
ENSMUSG00000030706.18_100198327_100232309_2	chr7	-	907	8	NNC	ENSMUSG00000030706.18	novel	4285	8	NA	NA	0	117	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	168.939912032506	2304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTTTGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	100232309	100198326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209116_100214400_100214487_100220458_100220497_100223668_100223722_100232196
ENSMUSG00000030706.18_100198327_100232309_3	chr7	-	916	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	0	3369	0	117	multi-exon	FALSE	canonical	3	320	junction_4	76.5855530682877	2383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTTTGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	100232309	100198326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
ENSMUSG00000030706.18_100198444_100232309_1	chr7	-	799	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	0	3486	0	0	multi-exon	FALSE	canonical	3	320	junction_4	76.5855530682877	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGAATGCTCGTGCTGG	NA	False	NA	NA	False	NA	NA	NA	100232309	100198443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
ENSMUSG00000030707.16_126298945_126300399_1	chr7	-	869	5	ISM	ENSMUSG00000030707.16	ENSMUST00000106364.8	1747	11	2993	0	0	0	3prime_fragment	FALSE	canonical	3	11	junction_2	3	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAGACTCCGGTGAACT	NA	False	NA	NA	False	AATAAA	-21	NA	126300399	126298944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_126299158_126299428_126299645_126299755_126299814_126299911_126300058_126300163
ENSMUSG00000030708.15_100152228_100161003_1	chr7	-	804	6	ISM	ENSMUSG00000030708.15	ENSMUST00000154516.3	905	7	3000	-60	-15	0	3prime_fragment	FALSE	canonical	3	47	junction_4	7.5736384915046	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTATGATGGGAAGTGA	NA	False	NA	-9	True	AATAAA	-13	NA	100161003	100152227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100159901_100160064_100160956
ENSMUSG00000030714.15_126248494_126271951_1	chr7	+	1146	10	NIC	ENSMUSG00000030714.15	novel	1312	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	148.255118788235	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	124	False	NA	33	True	AATAAA	-16	NA	126248493	126271951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270833_126270905_126271053_126271209_126271246_126271327_126271491_126271741
ENSMUSG00000030714.15_126248494_126271951_3	chr7	+	1153	10	FSM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	13	146	0	0	multi-exon	FALSE	canonical	3	419	junction_3	31.8433666561813	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	124	False	NA	33	True	AATAAA	-16	NA	126248493	126271951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
ENSMUSG00000030714.15_126248494_126271951_4	chr7	+	1239	11	NIC	ENSMUSG00000030714.15	novel	1312	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	179.607043291737	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	124	False	NA	33	True	AATAAA	-16	NA	126248493	126271951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_126248650_126260223_126260321_126261737_126261824_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
ENSMUSG00000030714.15_126248494_126271951_5	chr7	+	1404	9	ISM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	13	146	0	0	intron_retention	FALSE	canonical	3	419	junction_3	30.3840007240653	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	124	False	NA	33	True	AATAAA	-16	NA	126248493	126271951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327
ENSMUSG00000030717.10_126222424_126224661_1	chr7	-	638	3	NNC	ENSMUSG00000030717.10	novel	829	3	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1857.5	19715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTTTGGCGTGTGTTG	NA	False	NA	-11	True	AATAAA	-44	NA	126224661	126222423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_126222747_126224057_126224206_126224494
ENSMUSG00000030717.10_126222424_126224661_2	chr7	-	639	3	FSM	ENSMUSG00000030717.10	ENSMUST00000032961.4	829	3	187	3	-14	0	multi-exon	FALSE	canonical	3	3716	junction_2	16	20390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTTTGGCGTGTGTTG	NA	False	NA	-11	True	AATAAA	-44	NA	126224661	126222423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126222752_126224061_126224206_126224494
ENSMUSG00000030720.17_126171262_126184041_1	chr7	-	1847	18	NNC	ENSMUSG00000030720.17	novel	3203	18	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_17	50.8134521599864	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCCTTTTTGTGCAGTC	NA	False	NA	-6	True	AATAAA	-14	NA	126184041	126171261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182620_126183345_126183453_126183991
ENSMUSG00000030726.17_99732430_99770693_1	chr7	-	1878	12	FSM	ENSMUSG00000030726.17	ENSMUST00000032969.14	3069	12	79	1112	-20	170	multi-exon	FALSE	canonical	3	502	junction_4	47.2898570362863	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTGTTTTCTGTAAATC	NA	False	NA	NA	False	NA	NA	NA	99770693	99732429	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ENSMUSG00000030726.17_99732617_99770693_1	chr7	-	1691	12	FSM	ENSMUSG00000030726.17	ENSMUST00000032969.14	3069	12	79	1299	-20	0	multi-exon	FALSE	canonical	3	502	junction_4	47.2898570362863	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTGCCTAGGAGAATTC	NA	False	NA	-10	True	TATAAA	-17	NA	99770693	99732616	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ENSMUSG00000030727.13_126028271_126045073_1	chr7	+	2189	12	NIC	ENSMUSG00000030727.13	novel	2234	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	55.1880331980083	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTGCCTTGTGCCTGC	NA	False	NA	12	True	AATAAA	-15	NA	126028270	126045073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043694_126043751_126043991_126044109_126044468
ENSMUSG00000030738.12_126146083_126165555_1	chr7	-	2893	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	-25	-456	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	606.100839382359	5783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	-8	True	ATTAAA	-18	NA	126165555	126146082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158030_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ENSMUSG00000030738.12_126146083_126165555_3	chr7	-	2893	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	-25	-456	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	606.100839382359	5788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	-8	True	ATTAAA	-18	NA	126165555	126146082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157905_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ENSMUSG00000030738.12_126146083_126165555_4	chr7	-	3027	20	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	28	456	-25	-456	intron_retention	FALSE	canonical	3	1924	junction_14	261.383841247645	5761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	-8	True	ATTAAA	-18	NA	126165555	126146082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250
ENSMUSG00000030741.16_125969239_125976595_1	chr7	-	2113	13	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_12	122.006830409886	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976595	125969238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008_125976218_125976289
ENSMUSG00000030744.14_99128089_99132858_1	chr7	-	361	5	NNC	ENSMUSG00000030744.14	novel	489	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5833.37029512099	11753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGACTGGATTGTGTCC	8422	False	NA	-34	True	AATAAA	-36	NA	99132858	99128088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_99128159_99128480_99128526_99131506_99131562_99131776_99131908_99132798
ENSMUSG00000030744.14_99128089_99132858_2	chr7	-	835	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	87	986	0	0	multi-exon	FALSE	canonical	3	4974	junction_1	3419.39811549083	165793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGACTGGATTGTGTCC	8422	False	NA	-34	True	AATAAA	-36	NA	99132858	99128088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ENSMUSG00000030750.14_125066812_125090613_1	chr7	-	965	8	FSM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	155	0	-42	0	multi-exon	FALSE	canonical	3	553	junction_7	177.832872698624	4059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTGTGTGAGGTTGGGT	NA	False	NA	-11	True	AGTAAA	-33	NA	125090613	125066811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
ENSMUSG00000030750.14_125066812_125090613_2	chr7	-	926	8	NNC	ENSMUSG00000030750.14	novel	1120	8	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	366.156039002444	3809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTGTGTGAGGTTGGGT	NA	False	NA	-11	True	AGTAAA	-33	NA	125090613	125066811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_125067016_125067450_125067572_125068200_125068318_125070323_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
ENSMUSG00000030751.19_113863841_113875295_1	chr7	-	1131	10	NNC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	-6	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	887.193202057916	3033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCAAGTTTTTGTTTT	NA	False	NA	0	True	AATAAA	-17	NA	113875295	113863840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870362_113873042_113873151_113873260_113873363_113873650_113873696_113875235
ENSMUSG00000030751.19_113863841_113875295_10	chr7	-	1134	10	NNC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	871.718354108074	9443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCAAGTTTTTGTTTT	NA	False	NA	0	True	AATAAA	-17	NA	113875295	113863840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_113864183_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ENSMUSG00000030751.19_113863841_113875295_2	chr7	-	1135	10	NNC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	885.170095950734	9511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCAAGTTTTTGTTTT	NA	False	NA	0	True	AATAAA	-17	NA	113875295	113863840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869631_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ENSMUSG00000030751.19_113863841_113875295_3	chr7	-	1183	10	FSM	ENSMUSG00000030751.19	ENSMUST00000135570.8	960	10	-34	-189	-6	0	multi-exon	FALSE	canonical	3	33	junction_9	875.758056108824	7248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCAAGTTTTTGTTTT	NA	False	NA	0	True	AATAAA	-17	NA	113875295	113863840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875195
ENSMUSG00000030751.19_113863841_113875295_4	chr7	-	1138	10	NNC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	878.422084208208	3606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCAAGTTTTTGTTTT	NA	False	NA	0	True	AATAAA	-17	NA	113875295	113863840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873142_113873256_113873363_113873650_113873696_113875235
ENSMUSG00000030751.19_113863841_113875295_5	chr7	-	2620	9	NIC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	-6	0	intron_retention	FALSE	canonical	3	2548	junction_5	193.487685331651	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCAAGTTTTTGTTTT	NA	False	NA	0	True	AATAAA	-17	NA	113875295	113863840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ENSMUSG00000030751.19_113863841_113875295_6	chr7	-	831	10	NNC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	871.718354108074	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCAAGTTTTTGTTTT	NA	False	NA	0	True	AATAAA	-17	NA	113875295	113863840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_113863951_113865739_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ENSMUSG00000030751.19_113863841_113875295_7	chr7	-	382	4	NNC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	-6	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1387.48365355736	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCAAGTTTTTGTTTT	NA	False	NA	0	True	AATAAA	-17	NA	113875295	113863840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_113864061_113873305_113873363_113873650_113873696_113875235
ENSMUSG00000030751.19_113863841_113875295_8	chr7	-	1135	10	NNC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	886.543948622687	4879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCAAGTTTTTGTTTT	NA	False	NA	0	True	AATAAA	-17	NA	113875295	113863840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869575_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ENSMUSG00000030751.19_113863841_113875295_9	chr7	-	1138	9	NIC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	898.180165320411	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCAAGTTTTTGTTTT	NA	False	NA	0	True	AATAAA	-17	NA	113875295	113863840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113875195
ENSMUSG00000030751.19_113864030_113875295_1	chr7	-	954	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	58	189	-6	0	multi-exon	FALSE	canonical	3	2548	junction_6	196.061655709387	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCCAGATGTAAGTTTT	NA	False	NA	NA	False	TTTAAA	-39	NA	113875295	113864029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ENSMUSG00000030759.17_113113068_113167580_1	chr7	+	1797	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	27	3138	0	168	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGGAGTAAATTATGGTC	NA	False	NA	NA	False	ATTAAA	-16	NA	113113067	113167580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ENSMUSG00000030759.17_113113068_113170092_1	chr7	+	4309	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	27	626	0	427	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTATTGTATTTTTACA	NA	False	NA	NA	False	AATAAA	-24	NA	113113067	113170092	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ENSMUSG00000030760.15_97863015_97958713_1	chr7	-	3889	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	32	7419	0	-150	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTTTTGGAAGAAAATCT	NA	False	NA	1	True	AATAAA	-20	NA	97958713	97863014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ENSMUSG00000030760.15_97865650_97958713_1	chr7	-	1254	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	32	10054	0	0	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTACTGGCAAAATACC	NA	False	NA	-48	True	ATTAAA	-16	NA	97958713	97865649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ENSMUSG00000030763.8_122878494_122969074_1	chr7	+	3350	21	NIC	ENSMUSG00000030763.8	novel	365	3	NA	NA	-90513	-31626	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGACCGTCTGGCGGGTCC	NA	False	NA	NA	False	NA	NA	NA	122878493	122969074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ENSMUSG00000030763.8_122977279_123029571_1	chr7	+	1195	10	NNC	ENSMUSG00000030763.8	novel	1286	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	92.0315297554909	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTGCTACATCTGTAC	6898	False	NA	21	True	AATAAA	-21	NA	122977278	123029571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003721_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
ENSMUSG00000030763.8_122977279_123029571_2	chr7	+	1280	11	NNC	ENSMUSG00000030763.8	novel	1369	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	111.287959815966	2145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTGCTACATCTGTAC	6898	False	NA	21	True	AATAAA	-21	NA	122977278	123029571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003708_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027321_123027415_123029355
ENSMUSG00000030766.16_122886209_122969138_1	chr7	-	2031	19	ISM	ENSMUSG00000030766.16	ENSMUST00000106442.9	3336	20	-29	7715	0	0	5prime_fragment	FALSE	canonical	0	0	junction_18	49.264466447136	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACCAGGAAACCTACCTC	NA	False	NA	NA	False	AAGAAA	-18	NA	122969138	122886208	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ENSMUSG00000030768.13_182877757_183003049_1	chr1	-	1430	9	ISM	ENSMUSG00000030768.13	ENSMUST00000003035.12	4984	10	0	9927	0	0	5prime_fragment	FALSE	canonical	3	56	junction_6	14.115040736746	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCTGCCTCTGCCTTGC	NA	False	NA	-2	True	AATAAA	-13	NA	183003049	182877756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_182984515_182984604_183002886
ENSMUSG00000030770.16_112027112_112187992_1	chr7	+	1348	13	FSM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	199	2907	0	-185	multi-exon	FALSE	canonical	2	13	junction_2	5.24603024517905	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGTGAACTAATAACATC	3528	False	NA	NA	False	ATTAAA	-24	NA	112027111	112187992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ENSMUSG00000030770.16_112027112_112188181_1	chr7	+	1537	13	FSM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	199	2718	0	4	multi-exon	FALSE	canonical	2	13	junction_2	5.24603024517905	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGCTCAAGTTCATTAGG	3528	False	NA	NA	False	AATAAA	-38	NA	112027111	112188181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ENSMUSG00000030772.7_111716367_111757636_1	chr7	-	2135	7	ISM	ENSMUSG00000030772.7	ENSMUST00000033036.7	3359	8	628	1143	628	-1143	3prime_fragment	FALSE	canonical	3	37	junction_5	9.03234926989282	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATAAGCATGCCTTTC	NA	False	NA	-11	True	NA	NA	NA	111757636	111716366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111748167_111748252_111749817_111749956_111757389
ENSMUSG00000030774.14_97492142_97560489_1	chr7	+	1966	15	FSM	ENSMUSG00000030774.14	ENSMUST00000033040.12	3065	15	0	1099	0	0	multi-exon	TRUE	canonical	3	24	junction_1	56.3067853960129	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTTCCTGATCTAGTG	NA	False	NA	45	True	NA	NA	NA	97492141	97560489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_97492349_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ENSMUSG00000030779.17_122599069_122601780_1	chr7	+	2408	2	ISM	ENSMUSG00000030779.17	ENSMUST00000071590.6	5728	17	28928	0	-433	0	3prime_fragment	FALSE	canonical	3	144	junction_1	0	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTTGCAAATGTATATTA	NA	False	NA	15	True	AATAAA	-21	NA	122599068	122601780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_122599503_122599806
ENSMUSG00000030781.14_127869964_127871602_1	chr7	+	974	4	ISM	ENSMUSG00000030781.14	ENSMUST00000118169.8	2277	14	5116	0	218	0	3prime_fragment	FALSE	canonical	1	3	junction_1	2.82842712474619	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTTGTGGCTGAAACAT	NA	False	NA	NA	False	AATAAA	-16	NA	127869963	127871602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_127870125_127870206_127870423_127870920_127871051_127871135
ENSMUSG00000030785.9_127804786_127805618_1	chr7	-	560	3	FSM	ENSMUSG00000030785.9	ENSMUST00000033049.9	680	3	-59	179	-59	-179	multi-exon	FALSE	canonical	3	110	junction_1	3.5	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCCTCTGGCTCTTTGG	5324	False	NA	-6	True	AATAAA	-14	NA	127805618	127804785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127804985_127805071_127805209_127805394
ENSMUSG00000030788.17_110367413_110411612_1	chr7	-	3975	15	Fusion	ENSMUSG00000030788.17_ENSMUSG00000110062.2	novel	647	3	NA	NA	8878	-1529	multi-exon	FALSE	non_canonical	0	0	junction_1	0	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCCAGCCTTCTGCGG	NA	False	NA	NA	False	NA	NA	NA	110411612	110367412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr7_-_110367587_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUSG00000030788.17_110367550_110411612_1	chr7	-	3838	15	Fusion	ENSMUSG00000030788.17_ENSMUSG00000110062.2	novel	647	3	NA	NA	8878	-1666	multi-exon	FALSE	non_canonical	0	0	junction_1	0	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTTGGACCGGTCC	NA	False	NA	NA	False	NA	NA	NA	110411612	110367549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr7_-_110367587_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUSG00000030792.9_44856949_44861236_1	chr7	-	832	5	FSM	ENSMUSG00000030792.9	ENSMUST00000033057.9	1149	5	311	6	0	0	multi-exon	FALSE	canonical	3	39	junction_1	6.17960354715414	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAATCTCCTTTTGGTAT	8612	False	NA	-4	True	AATAAA	-17	NA	44861236	44856948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44857323_44859536_44859627_44859754_44859896_44860824_44860995_44861179
ENSMUSG00000030793.5_127591274_127592911_1	chr7	-	1278	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	128	2394	128	-462	multi-exon	FALSE	canonical	3	1219	junction_2	45	6206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGCCCAAGCCTTTTT	NA	False	NA	-10	True	NA	NA	NA	127592911	127591273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127592138_127592286_127592344_127592554
ENSMUSG00000030793.5_127591805_127592911_1	chr7	-	747	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	128	2925	128	-993	multi-exon	FALSE	canonical	3	1219	junction_2	45	6033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGGGATGTTTTTGCT	NA	False	NA	-5	True	AAAACA	-18	NA	127592911	127591804	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127592138_127592286_127592344_127592554
ENSMUSG00000030795.19_127566663_127581204_2	chr7	+	431	4	NNC	ENSMUSG00000030795.19	novel	1102	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	396.68879490099	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1184	False	NA	37	True	ATTAAA	-20	NA	127566662	127581204	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_127566750_127568733_127568759_127568888_127569044_127581040
ENSMUSG00000030795.19_127566663_127581204_3	chr7	+	262	2	NNC	ENSMUSG00000030795.19	novel	1102	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1184	False	NA	37	True	ATTAAA	-20	NA	127566662	127581204	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_127566750_127581029
ENSMUSG00000030800.11_127511688_127525009_1	chr7	-	1515	12	NNC	ENSMUSG00000030800.11	novel	1709	7	NA	NA	4258	13200	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGCCAGAGAGCCGCTTT	NA	False	NA	NA	False	NA	NA	NA	127525009	127511687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_127511755_127511818_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
ENSMUSG00000030801.11_127511688_127525009_1	chr7	+	1523	12	NNC	ENSMUSG00000030801.11	novel	1579	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.4521958852351	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGATTCCTCGCTCCTTT	NA	False	NA	92	True	NA	NA	NA	127511687	127525009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_127511755_127511810_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
ENSMUSG00000030802.15_127503254_127507780_1	chr7	+	1786	12	NNC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	177.404053919597	1394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGGCCCCAAATGTTG	NA	False	NA	28	True	ATTAAA	-20	NA	127503253	127507780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504926_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
ENSMUSG00000030805.15_127440936_127448191_1	chr7	+	1539	10	FSM	ENSMUSG00000030805.15	ENSMUST00000121705.8	1316	10	-204	-19	0	0	multi-exon	FALSE	canonical	3	172	junction_3	22.9965107390847	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTGCAGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	127440935	127448191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740
ENSMUSG00000030805.15_127440936_127448191_2	chr7	+	1526	10	NIC	ENSMUSG00000030805.15	novel	1456	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	172	junction_3	25.7681974534502	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTGCAGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	127440935	127448191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447840_127447922
ENSMUSG00000030811.15_127366593_127368108_1	chr7	+	1428	2	ISM	ENSMUSG00000030811.15	ENSMUST00000188580.3	2601	9	19274	-209	19147	8	3prime_fragment	FALSE	canonical	3	128	junction_1	0	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCTCTTCCCATTCTT	NA	False	NA	12	True	NA	NA	NA	127366592	127368108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_127366836_127366923
ENSMUSG00000030815.12_127172552_127182472_1	chr7	+	1510	9	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	38.180492401225	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCAGTGCCATGTCTGCT	NA	False	NA	19	True	AATAAA	-20	NA	127172551	127182472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_127172629_127173025_127173139_127176706_127176861_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ENSMUSG00000030815.12_127172552_127182472_2	chr7	+	1468	9	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	33.5016324229134	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCAGTGCCATGTCTGCT	NA	False	NA	19	True	AATAAA	-20	NA	127172551	127182472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_127172629_127173025_127173139_127176706_127176819_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ENSMUSG00000030816.9_127187939_127202758_1	chr7	+	4066	20	FSM	ENSMUSG00000030816.9	ENSMUST00000205694.2	5279	20	0	1213	0	1	multi-exon	FALSE	canonical	3	259	junction_5	49.1177002358039	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGCAGAGAAGCCCGTCC	NA	False	NA	13	True	AATAAA	-14	NA	127187938	127202758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ENSMUSG00000030825.20_45204361_45216565_1	chr7	+	1176	9	FSM	ENSMUSG00000030825.20	ENSMUST00000107752.12	1400	9	44	180	0	-177	multi-exon	FALSE	canonical	3	159	junction_3	205.455591308682	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTCGCCCTTGGCT	NA	False	NA	7	True	NA	NA	NA	45204360	45216565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45204491_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ENSMUSG00000030825.20_45208630_45216743_1	chr7	+	1199	5	NNC	ENSMUSG00000030825.20	novel	1400	9	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	251.516773794513	1156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGAGTGGTCGTGTC	NA	False	NA	8	True	NA	NA	NA	45208629	45216743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_45208897_45212338_45212444_45215378_45215447_45215554_45215641_45216070
ENSMUSG00000030825.20_45208630_45216743_2	chr7	+	1105	4	NIC	ENSMUSG00000030825.20	novel	1400	9	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	2	29	junction_1	264.181755615334	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGAGTGGTCGTGTC	NA	False	NA	8	True	NA	NA	NA	45208629	45216743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_45208897_45215378_45215447_45215543_45215641_45216070
ENSMUSG00000030825.20_45208630_45216743_3	chr7	+	1210	5	ISM	ENSMUSG00000030825.20	ENSMUST00000210997.2	1315	9	3162	-1	0	1	3prime_fragment	FALSE	canonical	3	557	junction_3	22.2864869371554	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGAGTGGTCGTGTC	NA	False	NA	8	True	NA	NA	NA	45208629	45216743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ENSMUSG00000030825.20_45208803_45216743_1	chr7	+	932	4	NIC	ENSMUSG00000030825.20	novel	1400	9	NA	NA	173	1	combination_of_known_splicesites	FALSE	canonical	2	29	junction_1	264.181755615334	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGAGTGGTCGTGTC	NA	False	NA	8	True	NA	NA	NA	45208802	45216743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_45208897_45215378_45215447_45215543_45215641_45216070
ENSMUSG00000030825.20_45208803_45216743_2	chr7	+	1026	5	NNC	ENSMUSG00000030825.20	novel	1400	9	NA	NA	173	1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	251.516773794513	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGAGTGGTCGTGTC	NA	False	NA	8	True	NA	NA	NA	45208802	45216743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_45208897_45212338_45212444_45215378_45215447_45215554_45215641_45216070
ENSMUSG00000030826.20_45219774_45239134_1	chr7	+	1574	11	FSM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	197	1	0	0	multi-exon	FALSE	canonical	3	349	junction_4	47.8895604490164	1602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTATCATGCTCTAA	2452	False	NA	NA	False	AATAAA	-17	NA	45219773	45239134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
ENSMUSG00000030835.7_45728970_45733523_1	chr7	+	757	4	ISM	ENSMUSG00000030835.7	ENSMUST00000033121.7	4257	31	45848	113	-3099	-113	3prime_fragment	FALSE	canonical	3	339	junction_1	5.90668171555645	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCCCTGCACTCGAGGCC	3102	False	NA	-84	True	NA	NA	NA	45728969	45733523	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_45729017_45730818_45730939_45732658_45732752_45733026
ENSMUSG00000030839.13_46162880_46289228_1	chr7	-	1288	11	NNC	ENSMUSG00000030839.13	novel	722	4	NA	NA	0	-70235	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.1751724925528	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTGAAAAATGTTTAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	46289228	46162879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_46163088_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46289136
ENSMUSG00000030842.13_101555185_101561110_1	chr7	+	1039	5	NNC	ENSMUSG00000030842.13	novel	1119	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	370.490553185908	3657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCTGTCCTGCCCACT	7101	False	NA	28	True	GATAAA	-32	NA	101555184	101561110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_101555248_101558870_101559017_101559235_101559308_101559626_101559754_101560479
ENSMUSG00000030842.13_101555185_101561110_2	chr7	+	573	5	NNC	ENSMUSG00000030842.13	novel	1119	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	379.820023168869	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCTGTCCTGCCCACT	7101	False	NA	28	True	GATAAA	-32	NA	101555184	101561110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559722_101560919
ENSMUSG00000030844.12_127975345_127995409_1	chr7	-	722	3	FSM	ENSMUSG00000030844.12	ENSMUST00000134144.2	458	3	0	-264	0	0	multi-exon	FALSE	canonical	1	3	junction_2	8	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTAGTCATTTCTACTT	9751	False	NA	NA	False	ATTAAA	-24	NA	127995409	127975344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127975767_127990687_127990832_127995253
ENSMUSG00000030847.9_128125340_128147355_1	chr7	+	1212	4	FSM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	0	1350	0	-1350	multi-exon	FALSE	canonical	3	128	junction_2	8.2192186706253	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAACCAGAAAGTAAGCC	7142	False	NA	NA	False	NA	NA	NA	128125339	128147355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_128125769_128141696_128142036_128143530_128143933_128147313
ENSMUSG00000030847.9_128125495_128148705_1	chr7	+	2407	4	FSM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	155	0	155	0	multi-exon	FALSE	canonical	3	128	junction_2	8.2192186706253	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTGTGGTTTCTAA	7297	False	NA	17	True	AATAAA	-22	NA	128125494	128148705	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_128125769_128141696_128142036_128143530_128143933_128147313
ENSMUSG00000030850.18_129993223_130121191_1	chr7	-	4616	12	FSM	ENSMUSG00000030850.18	ENSMUST00000033139.15	4735	12	119	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	49.9651117950737	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	False	NA	-15	True	AATAAA	-16	NA	130121191	129993222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ENSMUSG00000030850.18_129996075_130121310_1	chr7	-	1883	12	FSM	ENSMUSG00000030850.18	ENSMUST00000033139.15	4735	12	0	2852	0	0	multi-exon	FALSE	canonical	3	115	junction_5	49.9651117950737	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCAAGGTGTGCTTCA	NA	False	NA	44	True	NA	NA	NA	130121310	129996074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ENSMUSG00000030851.16_46510627_46527416_1	chr7	+	1220	8	FSM	ENSMUSG00000030851.16	ENSMUST00000014545.11	1370	8	0	150	0	-108	multi-exon	FALSE	canonical	1	3	junction_1	3.73619909446343	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCAATCTCAAGGCTAGAA	NA	False	NA	NA	False	AATAAA	-19	NA	46510626	46527416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_46510726_46511186_46511320_46515832_46515951_46519022_46519197_46522335_46522510_46525099_46525218_46525897_46526022_46527136
ENSMUSG00000030852.19_130247960_130366515_1	chr7	+	3707	17	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	154	junction_1	59.7013400184619	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247959	130366515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUSG00000030861.16_131012330_131046555_1	chr7	+	1963	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	0	4118	0	63	multi-exon	FALSE	canonical	3	100	junction_4	19.6022957839127	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAACCAACAAAAGGAGT	NA	False	NA	NA	False	AAAAAG	-13	NA	131012329	131046555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ENSMUSG00000030861.16_131012330_131047938_1	chr7	+	3346	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	0	2735	0	0	multi-exon	FALSE	canonical	3	100	junction_4	19.6022957839127	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATTCTCCCTTTTTATG	NA	False	NA	21	True	AATAAA	-25	NA	131012329	131047938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ENSMUSG00000030867.8_121758730_121769098_1	chr7	+	2104	11	NNC	ENSMUSG00000030867.8	novel	2199	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	366.335761290104	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTTTCTCTTTTTGGT	NA	False	NA	58	True	ATTAAA	-16	NA	121758729	121769098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609_121768875_121768903
ENSMUSG00000030868.7_121732295_121737867_1	chr7	+	695	4	ISM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	31	10400	0	3510	5prime_fragment	FALSE	canonical	3	323	junction_3	14.9666295470958	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGCGTGTATTGTCACTC	NA	False	NA	NA	False	AATAAA	-15	NA	121732294	121737867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470
ENSMUSG00000030868.7_121732295_121747455_1	chr7	+	689	6	FSM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	31	812	0	-349	multi-exon	FALSE	canonical	3	258	junction_5	42.3008274150755	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTCCTGTTTTTGACA	NA	False	NA	6	True	GATAAA	-22	NA	121732294	121747455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
ENSMUSG00000030868.7_121732295_121748267_1	chr7	+	1398	5	NIC	ENSMUSG00000030868.7	novel	1532	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	141.324758977329	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTAGGCTCATTCATT	NA	False	NA	14	True	AATAAA	-15	NA	121732294	121748267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121747279
ENSMUSG00000030869.12_121687382_121701059_1	chr7	-	673	5	FSM	ENSMUSG00000030869.12	ENSMUST00000033157.10	3479	5	50	2756	-8	299	multi-exon	FALSE	canonical	3	149	junction_1	2248.42489311963	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGATCGTTTCTGCTGAA	6408	False	NA	NA	False	TTTAAA	-36	NA	121701059	121687381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_121687562_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ENSMUSG00000030869.12_121690056_121700929_1	chr7	-	494	5	FSM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	145	777	0	0	multi-exon	FALSE	canonical	3	4604	junction_1	400.950978923858	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTTTTCTCAATTAGT	6538	False	NA	-13	True	AATAAA	-14	NA	121700929	121690055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ENSMUSG00000030869.12_121690056_121701059_1	chr7	-	728	5	NNC	ENSMUSG00000030869.12	novel	1416	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_1	2197.68361007676	11759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTTTTCTCAATTAGT	6408	False	NA	-13	True	AATAAA	-14	NA	121701059	121690055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_121690291_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ENSMUSG00000030869.12_121690056_121701059_2	chr7	-	624	5	FSM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	15	777	-8	0	multi-exon	FALSE	canonical	3	4604	junction_1	400.950978923858	12756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTTTTCTCAATTAGT	6408	False	NA	-13	True	AATAAA	-14	NA	121701059	121690055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ENSMUSG00000030871.12_121637877_121666293_1	chr7	-	2020	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	193	-167	0	167	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGCGTCATTACCAAG	NA	False	NA	1	True	NA	NA	NA	121666293	121637876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ENSMUSG00000030871.12_121638044_121666293_1	chr7	-	1853	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	193	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTGTTTTGCCTCCAT	NA	False	NA	-1	True	TTTAAA	-18	NA	121666293	121638043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ENSMUSG00000030872.15_121587988_121607596_1	chr7	-	2421	14	ISM	ENSMUSG00000030872.15	ENSMUST00000124566.2	4251	18	12794	2043	-5882	0	internal_fragment	FALSE	canonical	3	796	junction_12	26.1669650355481	580	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTGGTGTTGAGTCCA	NA	False	NA	-5	True	AATAAA	-14	NA	121607596	121587987	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553
ENSMUSG00000030879.11_105458525_105460212_1	chr7	-	1094	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	94	6112	-6	339	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	11778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGGCTCAGTTTGCTT	NA	False	NA	-2	True	NA	NA	NA	105460212	105458524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_105459352_105459656_105459726_105460014
ENSMUSG00000030879.11_105458864_105460306_1	chr7	-	849	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	0	6451	0	0	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	10060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGGATTTATGGAAAGTAA	NA	False	NA	-5	True	GATAAA	-43	NA	105460306	105458863	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_105459352_105459656_105459726_105460014
ENSMUSG00000030879.11_105458887_105460212_1	chr7	-	732	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	94	6474	-6	0	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	8158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGACTTTCTTGTCCT	NA	False	NA	-28	True	GATAAA	-20	NA	105460212	105458886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_105459352_105459656_105459726_105460014
ENSMUSG00000030884.13_120234463_120258497_1	chr7	+	1582	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	64	250	0	-250	multi-exon	FALSE	canonical	3	1087	junction_9	72.1248916810278	4563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTCTTGCATTCTTTC	NA	False	NA	19	True	AATAAA	-15	NA	120234462	120258497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ENSMUSG00000030887.5_120234463_120258441_1	chr7	-	1520	14	NNC	ENSMUSG00000030887.5	novel	2180	4	NA	NA	11032	23491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	175	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGGTCGGAGGACCGA	NA	False	NA	NA	False	NA	NA	NA	120258441	120234462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256888_120258243
ENSMUSG00000030887.5_120234463_120258497_1	chr7	-	1576	14	NNC	ENSMUSG00000030887.5	novel	2180	4	NA	NA	10976	23491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	702	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGGTCGGAGGACCGA	NA	False	NA	NA	False	NA	NA	NA	120258497	120234462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250147_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ENSMUSG00000030887.5_120234463_120258497_2	chr7	-	1572	14	NNC	ENSMUSG00000030887.5	novel	2180	4	NA	NA	10976	23491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1255	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGGTCGGAGGACCGA	NA	False	NA	NA	False	NA	NA	NA	120258497	120234462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248617_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ENSMUSG00000030887.5_120234463_120258497_3	chr7	-	1577	14	NNC	ENSMUSG00000030887.5	novel	2180	4	NA	NA	10976	23491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGGTCGGAGGACCGA	NA	False	NA	NA	False	NA	NA	NA	120258497	120234462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248573_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ENSMUSG00000030887.5_120234463_120258497_4	chr7	-	1577	14	NNC	ENSMUSG00000030887.5	novel	2180	4	NA	NA	10976	23491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	840	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGGTCGGAGGACCGA	NA	False	NA	NA	False	NA	NA	NA	120258497	120234462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_120234546_120236884_120236969_120237070_120237216_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ENSMUSG00000030887.5_120234463_120258497_5	chr7	-	1572	14	NNC	ENSMUSG00000030887.5	novel	2180	4	NA	NA	10976	23491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	489	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGGTCGGAGGACCGA	NA	False	NA	NA	False	NA	NA	NA	120258497	120234462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_120234546_120236884_120236969_120237070_120237221_120239456_120239512_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ENSMUSG00000030887.5_120234463_120258497_6	chr7	-	1572	14	NNC	ENSMUSG00000030887.5	novel	2180	4	NA	NA	10976	23491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGGTCGGAGGACCGA	NA	False	NA	NA	False	NA	NA	NA	120258497	120234462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_120234536_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ENSMUSG00000030887.5_120234463_120258560_1	chr7	-	1639	14	NNC	ENSMUSG00000030887.5	novel	2180	4	NA	NA	10913	23491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2062	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGGTCGGAGGACCGA	NA	False	NA	NA	False	NA	NA	NA	120258560	120234462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256888_120258243
ENSMUSG00000030887.5_120234463_120258747_4	chr7	-	1832	14	NIC	ENSMUSG00000030887.5	novel	2180	4	NA	NA	10726	23491	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	6061	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGGTCGGAGGACCGA	NA	False	NA	NA	False	NA	NA	NA	120258747	120234462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ENSMUSG00000030890.17_105385878_105391983_1	chr7	+	1567	13	FSM	ENSMUSG00000030890.17	ENSMUST00000033182.10	1795	13	79	149	0	0	multi-exon	FALSE	canonical	3	265	junction_1	33.4937805171846	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTATGGGACTTGTTCC	NA	False	NA	NA	False	NA	NA	NA	105385877	105391983	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_105385924_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUSG00000030894.6_105395126_105401414_1	chr7	-	2422	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	28	1108	6	0	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGAGTGATTTTTTTT	NA	False	NA	4	True	AATAAA	-30	NA	105401414	105395125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ENSMUSG00000030894.6_105395265_105401414_1	chr7	-	2283	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	28	1247	6	-139	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTGGCTGCAATCTATT	NA	False	NA	NA	False	NA	NA	NA	105401414	105395264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ENSMUSG00000030894.6_105395581_105401414_2	chr7	-	1967	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	28	1563	6	-455	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCTTCCTCTTTCCAG	NA	False	NA	NA	False	NA	NA	NA	105401414	105395580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ENSMUSG00000030905.6_119785603_119801231_1	chr7	-	1280	8	FSM	ENSMUSG00000030905.6	ENSMUST00000033198.6	1383	8	103	0	103	0	multi-exon	FALSE	canonical	1	2	junction_4	2.55550625999976	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTTTGACAACTTTCTA	NA	False	NA	1	True	AATAAA	-21	NA	119801231	119785602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_119785922_119788948_119789034_119789674_119789797_119794547_119794732_119796872_119796975_119798470_119798534_119800299_119800451_119800977
ENSMUSG00000030922.13_119495090_119515976_1	chr7	+	1087	5	FSM	ENSMUSG00000030922.13	ENSMUST00000054440.11	752	5	-15	-320	0	0	multi-exon	FALSE	canonical	3	10	junction_1	26.343879744639	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTTGTTTTGTTGAT	NA	False	NA	9	True	TATAAA	-20	NA	119495089	119515976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_119495114_119499333_119499532_119509026_119509186_119513395_119513489_119515363
ENSMUSG00000030934.10_132159354_132178127_1	chr7	-	2005	10	FSM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	0	147	0	-147	multi-exon	FALSE	canonical	3	402	junction_6	42.9636653837854	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCAACAGAGTATTTTGTA	NA	False	NA	-25	True	AATAAA	-19	NA	132178127	132159353	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
ENSMUSG00000030935.16_119383067_119393190_2	chr7	+	3460	9	NIC	ENSMUSG00000030935.16	novel	2704	15	NA	NA	3108	6454	intron_retention	FALSE	non_canonical	0	0	junction_1	0	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGCCGGAAGTCGGACGC	NA	False	NA	NA	False	NA	NA	NA	119383066	119393190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
ENSMUSG00000030935.16_119384989_119393190_1	chr7	+	1538	9	NIC	ENSMUSG00000030935.16	novel	3295	17	NA	NA	5030	6454	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGCCGGAAGTCGGACGC	NA	False	NA	NA	False	NA	NA	NA	119384988	119393190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
ENSMUSG00000030946.14_132212367_132308149_1	chr7	+	1271	5	NIC	ENSMUSG00000030946.14	novel	1612	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	131.685942681822	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGACTCAGCCTTTCTTA	NA	False	NA	12	True	AATAAA	-20	NA	132212366	132308149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_132212560_132243252_132243317_132244215_132244309_132251986_132252079_132307320
ENSMUSG00000030946.14_132212367_132308149_2	chr7	+	1521	6	NIC	ENSMUSG00000030946.14	novel	1612	7	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	20	junction_5	121.921942241747	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGACTCAGCCTTTCTTA	NA	False	NA	12	True	AATAAA	-20	NA	132212366	132308149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132307320
ENSMUSG00000030960.17_132428962_132454347_2	chr7	-	1063	5	NIC	ENSMUSG00000030960.17	novel	563	5	NA	NA	-2	224	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	164.442049062884	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTAGAGATAATGTCT	NA	False	NA	-9	True	ATTAAA	-17	NA	132454347	132428961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_132429612_132438828_132438937_132452319_132452439_132453154_132453221_132454227
ENSMUSG00000030960.17_132429186_132454347_3	chr7	-	839	5	NIC	ENSMUSG00000030960.17	novel	1107	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	164.442049062884	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGGTTTTTGTGC	NA	False	NA	NA	False	AGTAAA	-18	NA	132454347	132429185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_132429612_132438828_132438937_132452319_132452439_132453154_132453221_132454227
ENSMUSG00000030965.20_132460978_132485252_1	chr7	+	1280	9	FSM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	24	1588	0	-1585	multi-exon	FALSE	canonical	3	195	junction_8	19.6273883896967	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGCACTACTTTTCTT	NA	False	NA	NA	False	AGTAAA	-15	NA	132460977	132485252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
ENSMUSG00000030970.17_132588734_132724772_1	chr7	-	2767	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	123	558	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_10	266.085625316363	1146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTGACATTTAAGTACAT	NA	False	NA	-12	True	AATAAA	-21	NA	132724772	132588733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724715
ENSMUSG00000030978.11_102090902_102118133_1	chr7	+	3152	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	0	845	0	244	multi-exon	FALSE	canonical	3	773	junction_6	74.8152456899951	2111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTACTAAACTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	102090901	102118133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ENSMUSG00000030978.11_102091090_102118133_1	chr7	+	2964	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	188	845	0	244	multi-exon	FALSE	canonical	3	773	junction_6	74.8152456899951	2093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTACTAAACTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	102091089	102118133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ENSMUSG00000030978.11_102091090_102118133_2	chr7	+	2958	19	NNC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	0	244	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	227.118069038883	2084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTACTAAACTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	102091089	102118133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100265_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ENSMUSG00000030979.14_133288085_133310788_1	chr7	-	1549	10	FSM	ENSMUSG00000030979.14	ENSMUST00000033276.11	1762	10	222	-9	0	0	multi-exon	FALSE	canonical	3	35	junction_9	13.5163367087644	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATCTGAGTATGGTAGC	NA	False	NA	NA	False	NA	NA	NA	133310788	133288084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
ENSMUSG00000030979.14_133288085_133312182_1	chr7	-	2223	10	NIC	ENSMUSG00000030979.14	novel	1644	10	NA	NA	-381	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_9	18.4477908610847	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATCTGAGTATGGTAGC	NA	False	NA	NA	False	NA	NA	NA	133312182	133288084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133311457
ENSMUSG00000030980.18_118441445_118454907_1	chr7	-	805	3	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	295.5	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATAGTCTTTTGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	118454907	118441444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_118441620_118451995_118452564_118454845
ENSMUSG00000030980.18_118441445_118454907_2	chr7	-	806	3	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	295.5	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATAGTCTTTTGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	118454907	118441444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_118441617_118451991_118452564_118454845
ENSMUSG00000030980.18_118443013_118452563_1	chr7	-	3438	4	ISM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	2658	1568	2273	0	3prime_fragment	FALSE	canonical	0	0	junction_3	289.540248593448	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATTATTATTGTTGTTG	NA	False	NA	-10	True	ATTAAA	-17	NA	118452563	118443012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625
ENSMUSG00000030980.18_118444295_118454907_2	chr7	-	2218	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	314	2850	0	322	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAATCTTCATGGAGCT	NA	False	NA	NA	False	NA	NA	NA	118454907	118444294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ENSMUSG00000030980.18_118444724_118454907_1	chr7	-	1742	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.679175705304	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGGGTCACCTTCCGTTA	NA	False	NA	-35	True	AATAAA	-13	NA	118454907	118444723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_118445318_118447719_118447798_118449843_118449910_118451621_118452564_118454845
ENSMUSG00000030980.18_118444724_118454907_2	chr7	-	1789	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	314	3279	0	0	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGGGTCACCTTCCGTTA	NA	False	NA	-35	True	AATAAA	-13	NA	118454907	118444723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ENSMUSG00000030980.18_118444983_118454907_1	chr7	-	1530	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	314	3538	0	-259	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATTTCTTGATCAGTTG	NA	False	NA	-4	True	ATTAAA	-23	NA	118454907	118444982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ENSMUSG00000030980.18_118444983_118454907_2	chr7	-	1044	5	FSM	ENSMUSG00000030980.18	ENSMUST00000063607.12	4884	5	317	3523	0	-259	multi-exon	FALSE	canonical	3	187	junction_3	184.092877374438	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATTTCTTGATCAGTTG	NA	False	NA	-4	True	ATTAAA	-23	NA	118454907	118444982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118452111_118452564_118454845
ENSMUSG00000030980.18_118444983_118454907_3	chr7	-	1483	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	0	-259	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.679175705304	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATTTCTTGATCAGTTG	NA	False	NA	-4	True	ATTAAA	-23	NA	118454907	118444982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_118445318_118447719_118447798_118449843_118449910_118451621_118452564_118454845
ENSMUSG00000030982.20_118339970_118361369_1	chr7	+	1117	9	NIC	ENSMUSG00000030982.20	novel	1102	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	189.52226122543	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTGCAAAATTTAATTGAA	NA	False	NA	NA	False	NA	NA	NA	118339969	118361369	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118360988
ENSMUSG00000030982.20_118339970_118365767_1	chr7	+	916	9	ISM	ENSMUSG00000030982.20	ENSMUST00000129334.8	1552	15	15	17511	0	0	5prime_fragment	FALSE	canonical	3	302	junction_1	101.623616226741	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTGTTTGAAGTCTGGTT	NA	False	NA	NA	False	NA	NA	NA	118339969	118365767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587
ENSMUSG00000030982.20_118339970_118440712_1	chr7	+	3099	31	FSM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	521	1477	0	0	multi-exon	TRUE	canonical	3	302	junction_1	75.0223744403406	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTGTCTCGGTGTGTG	NA	False	NA	10	True	ATTAAA	-21	NA	118339969	118440712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ENSMUSG00000030982.20_118417557_118440712_1	chr7	+	1003	6	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	-3289	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	229.732888372562	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTGTCTCGGTGTGTG	NA	False	NA	10	True	ATTAAA	-21	NA	118417556	118440712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_118417694_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ENSMUSG00000030982.20_118425035_118440712_1	chr7	+	917	6	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	108	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	232.854117421187	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTGTCTCGGTGTGTG	NA	False	NA	10	True	ATTAAA	-21	NA	118425034	118440712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_118425086_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ENSMUSG00000030983.5_133322675_133378532_1	chr7	+	2951	12	NIC	ENSMUSG00000030983.5	novel	1244	7	NA	NA	3567	55658	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCCTCCCTCTCGCCGTC	NA	False	NA	NA	False	NA	NA	NA	133322674	133378532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330
ENSMUSG00000030986.14_133311077_133322874_1	chr7	-	1220	7	NNC	ENSMUSG00000030986.14	novel	2233	11	NA	NA	9755	11594	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCGCCTGCGCGAGTC	5953	False	NA	NA	False	NA	NA	NA	133322874	133311076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_133311258_133315916_133315992_133316627_133316700_133318589_133318680_133319327_133319516_133320832_133321008_133322435
ENSMUSG00000030986.14_133311077_133322874_2	chr7	-	1220	7	NNC	ENSMUSG00000030986.14	novel	2233	11	NA	NA	9755	11594	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCGCCTGCGCGAGTC	5953	False	NA	NA	False	NA	NA	NA	133322874	133311076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_133311258_133315916_133315992_133316627_133316709_133318589_133318680_133319336_133319516_133320832_133321008_133322435
ENSMUSG00000030986.14_133311077_133322874_3	chr7	-	1336	7	NNC	ENSMUSG00000030986.14	novel	2233	11	NA	NA	9755	11594	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCGCCTGCGCGAGTC	5953	False	NA	NA	False	NA	NA	NA	133322874	133311076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_133311258_133315916_133315992_133316627_133316709_133318482_133318680_133319327_133319516_133320832_133321008_133322435
ENSMUSG00000030986.14_133322675_133361874_1	chr7	-	2874	12	FSM	ENSMUSG00000030986.14	ENSMUST00000140593.9	2998	12	124	0	124	0	multi-exon	FALSE	canonical	3	66	junction_11	95.5958261822716	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCTCTTCAATGGGTTT	NA	False	NA	-13	True	AATAAA	-15	NA	133361874	133322674	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133361749
ENSMUSG00000030986.14_133322839_133361874_1	chr7	-	2710	12	FSM	ENSMUSG00000030986.14	ENSMUST00000140593.9	2998	12	124	164	124	0	multi-exon	FALSE	canonical	3	66	junction_11	95.5958261822716	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTACTATTCCATGCT	NA	False	NA	-7	True	AATAAA	-22	NA	133361874	133322838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133361749
ENSMUSG00000030990.19_101872279_101887774_1	chr7	+	2002	7	FSM	ENSMUSG00000030990.19	ENSMUST00000033292.14	1201	7	3	-804	0	0	multi-exon	FALSE	canonical	3	107	junction_5	27.0657635317306	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTAGGTATGTTGCTCC	638	False	NA	16	True	AATAAA	-23	NA	101872278	101887774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ENSMUSG00000031007.3_12454040_12481934_1	chrX	+	970	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	0	1354	0	-1354	multi-exon	FALSE	canonical	3	980	junction_3	62.8369666279333	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAACCTTGCATATAAGT	NA	False	NA	NA	False	NA	NA	NA	12454039	12481934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031007.3_12454040_12482983_1	chrX	+	2019	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	0	305	0	-305	multi-exon	FALSE	canonical	3	980	junction_3	62.8369666279333	3439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCACTGCAATTCTG	NA	False	NA	32	True	AATAAA	-16	NA	12454039	12482983	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031010.18_12937753_13006755_1	chrX	+	4697	29	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	0	6734	combination_of_known_junctions	TRUE	canonical	3	383	junction_14	111.312502506617	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCTAAATAATGAAATTG	823	False	NA	NA	False	NA	NA	NA	12937752	13006755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648
ENSMUSG00000031010.18_13022597_13035945_1	chrX	+	2192	11	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	84844	3622	-4499	-192	3prime_fragment	FALSE	canonical	3	1026	junction_7	67.7468818470636	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATGGCAAAGGTGTATA	NA	False	NA	NA	False	AATAAA	-18	NA	13022596	13035945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ENSMUSG00000031015.9_109820938_109881706_1	chr7	+	3000	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	20	1007	0	-1007	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATAGTTGCCTTCATA	NA	False	NA	4	True	AATAAA	-16	NA	109820937	109881706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ENSMUSG00000031016.10_109730116_109742493_1	chr7	+	1897	6	ISM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	8863	0	8863	0	3prime_fragment	TRUE	canonical	3	352	junction_1	28.2517256110136	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAAATCTTCACGGTG	NA	False	NA	26	True	ATTAAA	-23	NA	109730115	109742493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ENSMUSG00000031021.14_109335778_109351453_1	chr7	-	933	5	FSM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	33	737	0	-735	multi-exon	FALSE	canonical	3	85	junction_4	15.7698287879102	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAAGCCCCGTGCCTGG	NA	False	NA	NA	False	AATAAA	-21	NA	109351453	109335777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_109336199_109342753_109342889_109344516_109344626_109349219_109349312_109351277
ENSMUSG00000031022.16_109302959_109311396_1	chr7	-	966	6	NIC	ENSMUSG00000031022.16	novel	1957	6	NA	NA	8827	8429	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	1067	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGCGCTCACACGGACA	NA	False	NA	NA	False	NA	NA	NA	109311396	109302958	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ENSMUSG00000031023.6_109302959_109311175_1	chr7	+	776	5	NNC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	175.074805440417	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCATCAATCTTGATTT	NA	False	NA	NA	False	AATAAA	-25	NA	109302958	109311175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_109303240_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ENSMUSG00000031023.6_109302959_109311175_5	chr7	+	914	5	NIC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	347	junction_1	28.0624304008046	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCATCAATCTTGATTT	NA	False	NA	NA	False	AATAAA	-25	NA	109302958	109311175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ENSMUSG00000031023.6_109302959_109311396_2	chr7	+	1135	5	NIC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	347	junction_1	28.0624304008046	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTTATTGCTATTAAA	NA	False	NA	NA	False	AATAAA	-25	NA	109302958	109311396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ENSMUSG00000031023.6_109302959_109311396_4	chr7	+	997	5	NNC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	175.074805440417	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTTATTGCTATTAAA	NA	False	NA	NA	False	AATAAA	-25	NA	109302958	109311396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_109303240_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ENSMUSG00000031024.14_109123127_109302812_1	chr7	-	4314	21	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_20	42.4156810625504	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109302812	109123126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109302744
ENSMUSG00000031024.14_109155588_109302812_1	chr7	-	1344	4	NIC	ENSMUSG00000031024.14	novel	553	4	NA	NA	0	800	combination_of_known_junctions	FALSE	canonical	3	65	junction_3	69.5237769080158	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGTACCTTTGAGTACGA	NA	False	NA	NA	False	NA	NA	NA	109302812	109155587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_109156669_109169213_109169319_109216264_109216355_109302744
ENSMUSG00000031027.16_108878430_108986772_1	chr7	-	1707	11	NNC	ENSMUSG00000031027.16	novel	2295	13	NA	NA	51252	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_10	9.45568612000208	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCAGTCCCTCACGTGT	NA	False	NA	-14	True	AATAAA	-26	NA	108986772	108878429	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108986659
ENSMUSG00000031027.16_108878430_108986772_2	chr7	-	2169	13	NNC	ENSMUSG00000031027.16	novel	2295	13	NA	NA	51252	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	19.7188573029304	160	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCAGTCCCTCACGTGT	NA	False	NA	-14	True	AATAAA	-26	NA	108986772	108878429	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108939575_108939687_108940495_108940847_108986659
ENSMUSG00000031029.7_108533624_108540898_1	chr7	+	1074	9	NNC	ENSMUSG00000031029.7	novel	2514	8	NA	NA	0	683	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	796.826822073027	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCTGATGCGAGTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	108533623	108540898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_108533702_108533881_108534015_108536952_108537024_108537242_108537323_108537615_108537754_108539396_108539489_108539850_108539988_108540100_108540215_108540667
ENSMUSG00000031029.7_108533899_108540898_1	chr7	+	979	8	FSM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	275	1260	275	683	multi-exon	FALSE	canonical	3	2245	junction_2	107.423632105296	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCTGATGCGAGTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	108533898	108540898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_108534015_108536952_108537024_108537242_108537323_108537615_108537754_108539396_108539489_108539850_108539988_108540100_108540215_108540667
ENSMUSG00000031059.10_20481565_20483514_1	chrX	-	564	3	FSM	ENSMUSG00000031059.10	ENSMUST00000116621.2	908	3	344	0	344	0	multi-exon	FALSE	canonical	3	2198	junction_1	70	9259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGTTACTGCTGCTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	20483514	20481564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_20481782_20481952_20482084_20483298
ENSMUSG00000031060.17_20484022_20517128_1	chrX	+	3391	24	FSM	ENSMUSG00000031060.17	ENSMUST00000115374.8	3564	24	161	12	0	1	multi-exon	FALSE	canonical	3	108	junction_4	93.2983708932913	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	555	False	NA	29	True	AATAAA	-17	NA	20484021	20517128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ENSMUSG00000031060.17_20484022_20517128_2	chrX	+	3083	22	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_4	100.321998591339	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	555	False	NA	29	True	AATAAA	-17	NA	20484021	20517128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ENSMUSG00000031065.15_20563428_20565125_1	chrX	+	378	3	ISM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	8771	994	744	-913	3prime_fragment	FALSE	canonical	3	1538	junction_2	21	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTGATGTGTCTGTC	5864	False	NA	14	True	NA	NA	NA	20563427	20565125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_20563450_20564689_20564768_20564847
ENSMUSG00000031065.15_20563428_20566119_1	chrX	+	1372	3	ISM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	8771	0	744	0	3prime_fragment	FALSE	canonical	3	1538	junction_2	21	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	5864	False	NA	18	True	ATTAAA	-20	NA	20563427	20566119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_20563450_20564689_20564768_20564847
ENSMUSG00000031068.9_137039384_137069916_1	chr7	+	871	9	NNC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	0	-407	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1242.07064387457	959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCGTGTAGAATGTCT	NA	False	NA	34	True	AATAAA	-22	NA	137039383	137069916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055213_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ENSMUSG00000031068.9_137039384_137069916_2	chr7	+	1231	11	NNC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	0	-407	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1120.47294032475	8056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCGTGTAGAATGTCT	NA	False	NA	34	True	AATAAA	-22	NA	137039383	137069916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066231_137069661
ENSMUSG00000031068.9_137039384_137069916_3	chr7	+	1288	12	NNC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	0	-407	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_4	1395.61737871402	8037	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCGTGTAGAATGTCT	NA	False	NA	34	True	AATAAA	-22	NA	137039383	137069916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060571_137060623_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ENSMUSG00000031077.8_144133429_144136200_1	chr7	-	1529	2	FSM	ENSMUSG00000031077.8	ENSMUST00000033394.8	3903	2	0	2374	0	-2374	multi-exon	FALSE	canonical	3	26	junction_1	0	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTGGGTGTGATAA	NA	False	NA	-5	True	AATAAA	-21	NA	144136200	144133428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_144134598_144135840
ENSMUSG00000031078.16_143989472_144024482_2	chr7	-	3022	18	FSM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	264	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	258.149054338875	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGATCTTCTGC	NA	False	NA	-20	True	AATAAA	-14	NA	144024482	143989471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ENSMUSG00000031095.16_37652952_37665073_1	chrX	-	441	4	ISM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	0	30801	0	-30501	5prime_fragment	FALSE	canonical	3	600	junction_3	171.302850725453	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGTAGTAACGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	37665073	37652951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_37653086_37653809_37653984_37661280_37661356_37665015
ENSMUSG00000031104.3_47608307_47619110_1	chrX	+	1014	2	FSM	ENSMUSG00000031104.3	ENSMUST00000033430.3	1158	2	145	-1	145	1	multi-exon	FALSE	canonical	3	18	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGTGGCTTTGTGTCTTG	NA	False	NA	7	True	AATAAA	-15	NA	47608306	47619110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_47608736_47618525
ENSMUSG00000031105.17_47712290_47751171_1	chrX	+	1524	11	NIC	ENSMUSG00000031105.17	novel	1760	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	33.2180673730426	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGACTTTGTCTTCA	NA	False	NA	14	True	ATTAAA	-17	NA	47712289	47751171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_47712386_47712550_47712706_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ENSMUSG00000031105.17_47712642_47751171_1	chrX	+	1337	10	NIC	ENSMUSG00000031105.17	novel	1582	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	17.3254968040219	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGACTTTGTCTTCA	NA	False	NA	14	True	ATTAAA	-17	NA	47712641	47751171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_47712706_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ENSMUSG00000031105.17_47712642_47751171_2	chrX	+	1573	11	FSM	ENSMUSG00000031105.17	ENSMUST00000033431.14	1760	11	187	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	43.9708994677161	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGACTTTGTCTTCA	NA	False	NA	14	True	ATTAAA	-17	NA	47712641	47751171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_47712706_47712838_47713075_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ENSMUSG00000031107.7_47783881_47799600_1	chrX	+	1738	6	NNC	ENSMUSG00000031107.7	novel	1747	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	149.080381003001	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCATTTGGTCCACTCA	NA	False	NA	NA	False	NA	NA	NA	47783880	47799600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_47783998_47784196_47784313_47786277_47786330_47795181_47795312_47797766_47797951_47798461
ENSMUSG00000031109.17_48100325_48377145_2	chrX	-	2262	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114918.9	3226	16	-26	990	-9	-431	multi-exon	FALSE	canonical	3	25	junction_4	10.7695042700313	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGAGTTTTGTCCTCA	NA	False	NA	NA	False	AATAAA	-20	NA	48377145	48100324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48376977
ENSMUSG00000031118.9_51057572_51061675_1	chrX	-	1525	5	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	35.6195171219375	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGTTGCTCCGTTTCA	NA	False	NA	-2	True	CATAAA	-17	NA	51061675	51057571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_51058747_51059091_51059163_51059359_51059477_51059858_51059953_51061607
ENSMUSG00000031119.5_51142354_51254253_1	chrX	-	2319	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-124	456	-124	-456	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACCAAGTTCTCACTTTT	NA	False	NA	-3	True	AGTAAA	-26	NA	51254253	51142353	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
ENSMUSG00000031134.17_56428711_56438341_1	chrX	-	2318	10	FSM	ENSMUSG00000031134.17	ENSMUST00000140384.8	2139	10	0	-179	0	179	multi-exon	FALSE	canonical	3	61	junction_8	6.66296193358442	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTGGTGTTGGGTTC	NA	False	NA	-8	True	AATAAA	-13	NA	56438341	56428710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_56429922_56430492_56430582_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
ENSMUSG00000031139.17_59101316_59223621_1	chrX	-	3812	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	828	0	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_27	79.0220750182634	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59223621	59101315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ENSMUSG00000031139.17_59157805_59223621_1	chrX	-	2738	15	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	828	-56486	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_14	93.2665972536004	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTTCTACTTTGTTT	NA	False	NA	-1	True	NA	NA	NA	59223621	59157804	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ENSMUSG00000031139.17_59157805_59224523_1	chrX	-	3227	15	ISM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	-74	56489	-74	-56486	5prime_fragment	FALSE	canonical	3	390	junction_14	50.407775963149	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTTCTACTTTGTTT	NA	False	NA	-1	True	NA	NA	NA	59224523	59157804	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ENSMUSG00000031143.5_7460049_7471620_1	chrX	-	2215	17	NNC	ENSMUSG00000031143.5	novel	2353	17	NA	NA	136	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	59.8474297171566	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACGCTTAGGCATGGAT	NA	False	NA	-10	True	AATAAA	-18	NA	7471620	7460048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470572_7471478
ENSMUSG00000031145.16_7534180_7537611_1	chrX	+	1075	5	NNC	ENSMUSG00000031145.16	novel	2487	6	NA	NA	1843	3186	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGCGCCTAGCAAAGCAGG	NA	False	NA	NA	False	AATGAA	-3	NA	7534179	7537611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_7534746_7535165_7535257_7535653_7535686_7535841_7535998_7537381
ENSMUSG00000031145.16_7534180_7537611_2	chrX	+	1130	5	NNC	ENSMUSG00000031145.16	novel	2487	6	NA	NA	1843	3186	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	17644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGCGCCTAGCAAAGCAGG	NA	False	NA	NA	False	AATGAA	-3	NA	7534179	7537611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_7534746_7535165_7535257_7535662_7535750_7535841_7535998_7537381
ENSMUSG00000031145.16_7534180_7537611_3	chrX	+	1107	5	NNC	ENSMUSG00000031145.16	novel	2487	6	NA	NA	1843	3186	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	16653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGCGCCTAGCAAAGCAGG	NA	False	NA	NA	False	AATGAA	-3	NA	7534179	7537611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_7534746_7535165_7535257_7535653_7535750_7535841_7535966_7537381
ENSMUSG00000031148.15_7563370_7574870_1	chrX	+	1948	11	FSM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	0	1631	0	424	multi-exon	FALSE	canonical	3	223	junction_9	32.218007387174	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTCAAAGGCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	7563369	7574870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
ENSMUSG00000031149.8_7594800_7596680_1	chrX	+	594	3	FSM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	122	623	122	-623	multi-exon	FALSE	canonical	3	755	junction_2	75.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACCCCATACCCAAGACC	1292	False	NA	NA	False	NA	NA	NA	7594799	7596680	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7595002_7595954_7596173_7596506
ENSMUSG00000031149.8_7594800_7596790_1	chrX	+	704	3	FSM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	122	513	122	-513	multi-exon	FALSE	canonical	3	755	junction_2	75.5	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCATCTCTTAGCCTCCA	1292	False	NA	NA	False	AAAAAG	-34	NA	7594799	7596790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7595002_7595954_7596173_7596506
ENSMUSG00000031149.8_7594800_7597303_1	chrX	+	1551	2	ISM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	122	0	122	0	intron_retention	FALSE	canonical	3	906	junction_1	0	2292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCTCCTGTGTGAAG	1292	False	NA	7	True	AATAAA	-20	NA	7594799	7597303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_7595002_7595954
ENSMUSG00000031149.8_7594800_7597303_2	chrX	+	1217	3	FSM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	122	0	122	0	multi-exon	FALSE	canonical	3	755	junction_2	75.5	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCTCCTGTGTGAAG	1292	False	NA	7	True	AATAAA	-20	NA	7594799	7597303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7595002_7595954_7596173_7596506
ENSMUSG00000031153.17_7656247_7686806_1	chrX	+	2913	25	FSM	ENSMUSG00000031153.17	ENSMUST00000065932.14	3156	25	243	0	0	0	multi-exon	FALSE	canonical	2	42	junction_24	10.7256669049321	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGTCTCATTCTTTTC	3273	False	NA	11	True	NA	NA	NA	7656246	7686806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ENSMUSG00000031157.11_7760758_7765140_1	chrX	-	1125	7	NIC	ENSMUSG00000031157.11	novel	1104	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	180.072824774373	2190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGGCTTGAGTGCTTC	664	False	NA	-1	True	AATAAA	-22	NA	7765140	7760757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765018
ENSMUSG00000031158.12_7765596_7773106_1	chrX	+	885	6	NNC	ENSMUSG00000031158.12	novel	2381	6	NA	NA	0	-103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	374.626534030893	3593	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTGCCTTCAGT	1189	False	NA	31	True	TTTAAA	-18	NA	7765595	7773106	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_7765709_7767199_7767300_7769911_7769976_7772321_7772439_7772519_7772631_7772726
ENSMUSG00000031160.5_7790515_7794846_1	chrX	-	1206	3	NNC	ENSMUSG00000031160.5	novel	1077	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTTTGTTTTTCTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	7794846	7790514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_7791453_7793757_7793887_7794707
ENSMUSG00000031161.16_7796698_7814040_1	chrX	-	3642	29	FSM	ENSMUSG00000031161.16	ENSMUST00000115642.8	4069	29	88	339	-34	-335	multi-exon	FALSE	canonical	3	285	junction_28	46.7627942767691	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGCCTGTTTCCCTTCT	NA	False	NA	NA	False	ACTAAA	-10	NA	7814040	7796697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ENSMUSG00000031163.3_7870439_7872258_1	chrX	-	620	2	ISM	ENSMUSG00000031163.3	ENSMUST00000033503.3	673	4	12473	0	12473	0	3prime_fragment	FALSE	canonical	3	46	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCACTCTTGGCAGAG	NA	False	NA	-9	True	AATAAA	-21	NA	7872258	7870438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_7870742_7871941
ENSMUSG00000031163.3_7870439_7882062_1	chrX	-	948	4	NNC	ENSMUSG00000031163.3	novel	673	4	NA	NA	2669	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	9.28559218478941	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCACTCTTGGCAGAG	NA	False	NA	-9	True	AATAAA	-21	NA	7882062	7870438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_7870742_7871941_7872098_7881456_7881595_7881711
ENSMUSG00000031167.17_8008598_8011935_1	chrX	-	1149	7	NNC	ENSMUSG00000031167.17	novel	1183	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	432.420962591881	2153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATAATGCTTTTTCCT	6562	False	NA	-7	True	ATTAAA	-25	NA	8011935	8008597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_8009186_8009485_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUSG00000031167.17_8008711_8011935_1	chrX	-	1045	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115615.9	1183	7	27	111	0	0	multi-exon	FALSE	canonical	3	391	junction_1	305.254766092558	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGTGAATGTCATTTT	6562	False	NA	NA	False	ATTAAA	-38	NA	8011935	8008710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUSG00000031167.17_8008954_8011935_1	chrX	-	802	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115615.9	1183	7	27	354	0	175	multi-exon	FALSE	canonical	3	391	junction_1	305.254766092558	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTGTTTAGGCACTC	6562	False	NA	NA	False	NA	NA	NA	8011935	8008953	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUSG00000031168.15_8051570_8059137_1	chrX	-	1122	5	NNC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	342.13776465044	3874	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGAGATATTTAATTA	NA	False	NA	-5	True	AATAAA	-17	NA	8059137	8051569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_8052073_8052882_8053005_8053117_8053159_8056317_8056676_8059039
ENSMUSG00000031168.15_8051570_8059137_2	chrX	-	1107	4	NNC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	374.770151781951	3858	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGAGATATTTAATTA	NA	False	NA	-5	True	AATAAA	-17	NA	8059137	8051569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_8052073_8052882_8053014_8056300_8056676_8059039
ENSMUSG00000031168.15_8051570_8059137_3	chrX	-	1235	4	NIC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	780	junction_2	7.25718035235908	3904	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGAGATATTTAATTA	NA	False	NA	-5	True	AATAAA	-17	NA	8059137	8051569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_8052073_8052882_8053159_8056317_8056676_8059039
ENSMUSG00000031171.12_8106659_8118609_1	chrX	-	1637	13	FSM	ENSMUSG00000031171.12	ENSMUST00000033513.10	3425	13	36	1752	-7	0	multi-exon	FALSE	canonical	3	43	junction_4	72.5114933418604	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCACGTTGCTTACTT	NA	False	NA	-14	True	AATAAA	-21	NA	8118609	8106658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111895_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ENSMUSG00000031171.12_8106659_8118609_2	chrX	-	1626	13	NNC	ENSMUSG00000031171.12	novel	1656	13	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	82.6271326838561	1011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCACGTTGCTTACTT	NA	False	NA	-14	True	AATAAA	-21	NA	8118609	8106658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117272_8118410
ENSMUSG00000031171.12_8106800_8118609_1	chrX	-	1496	13	FSM	ENSMUSG00000031171.12	ENSMUST00000033513.10	3425	13	36	1893	-7	-141	multi-exon	FALSE	canonical	3	43	junction_4	72.5114933418604	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTCTTCCTATGGTCA	NA	False	NA	NA	False	NA	NA	NA	8118609	8106799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111895_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ENSMUSG00000031171.12_8106800_8118609_2	chrX	-	1490	13	FSM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	25	141	-7	-141	multi-exon	FALSE	canonical	3	233	junction_4	23.6231995198694	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTCTTCCTATGGTCA	NA	False	NA	NA	False	NA	NA	NA	8118609	8106799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ENSMUSG00000031176.9_9520506_9527260_1	chrX	-	2041	4	ISM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	1982	0	-1391	0	3prime_fragment	FALSE	canonical	3	262	junction_3	17.0163320241336	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGCTCTGGTTGATCC	NA	False	NA	-1	True	AATAAA	-21	NA	9527260	9520505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_9522303_9522618_9522697_9523279_9523404_9527218
ENSMUSG00000031197.12_74557923_74577600_1	chrX	+	629	6	FSM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	18	948	0	-948	multi-exon	FALSE	canonical	3	1794	junction_5	66.7580706731403	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATTCAGGTTTTCAAAC	NA	False	NA	NA	False	AATAAA	-23	NA	74557922	74577600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
ENSMUSG00000031197.12_74557923_74578336_1	chrX	+	1365	6	FSM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	18	212	0	-212	multi-exon	FALSE	canonical	3	1794	junction_5	66.7580706731403	2032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTAAGCTTTTTTATT	NA	False	NA	NA	False	TATAAA	-18	NA	74557922	74578336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
ENSMUSG00000031198.5_74426028_74438360_1	chrX	+	834	5	FSM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	23	1705	0	426	multi-exon	FALSE	canonical	3	165	junction_1	30.589009464185	1442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTATCTTGGTGTATG	560	False	NA	NA	False	AATACA	-23	NA	74426027	74438360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_74426058_74430707_74430859_74434389_74434466_74435245_74435378_74437915
ENSMUSG00000031201.18_74460303_74493747_1	chrX	+	906	9	NNC	ENSMUSG00000031201.18	novel	2473	10	NA	NA	0	-591	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	482.141819774016	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTAATATTTTTTTTCA	NA	False	NA	NA	False	AATAAA	-21	NA	74460302	74493747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_74460452_74462016_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574
ENSMUSG00000031201.18_74460303_74493747_2	chrX	+	604	6	NNC	ENSMUSG00000031201.18	novel	2093	10	NA	NA	0	-591	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	525.188575656402	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTAATATTTTTTTTCA	NA	False	NA	NA	False	AATAAA	-21	NA	74460302	74493747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_74460452_74462016_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74493644
ENSMUSG00000031201.18_74460303_74493751_1	chrX	+	923	10	FSM	ENSMUSG00000031201.18	ENSMUST00000114074.8	2473	10	-13	1563	0	-587	multi-exon	FALSE	canonical	1	349	junction_4	251.832836972818	1632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATATTTTTTTTCAATTT	NA	False	NA	NA	False	AATAAA	-25	NA	74460302	74493751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_74460448_74461182_74461200_74462016_74462072_74466384_74466505_74479070_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574
ENSMUSG00000031201.18_74460303_74494836_1	chrX	+	1457	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.737087337903	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTAACATTGTCACTAC	NA	False	NA	NA	False	NA	NA	NA	74460302	74494836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_74460452_74462016_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ENSMUSG00000031207.17_95139648_95211458_1	chrX	+	3142	13	FSM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	0	700	0	-700	multi-exon	FALSE	canonical	3	982	junction_10	94.3325971702724	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCACTTTGGAGCAGC	NA	False	NA	NA	False	NA	NA	NA	95139647	95211458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ENSMUSG00000031221.8_99537961_99559610_1	chrX	+	1327	6	NNC	ENSMUSG00000031221.8	novel	1518	6	NA	NA	0	-121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	153.571611960023	4542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTATCCGCTGGTTTT	NA	False	NA	29	True	AATAAA	-32	NA	99537960	99559610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_99538157_99538510_99538805_99546600_99546797_99548795_99548876_99549545_99549659_99559162
ENSMUSG00000031221.8_99537961_99559610_2	chrX	+	1326	6	NNC	ENSMUSG00000031221.8	novel	1518	6	NA	NA	0	-121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	151.390092146085	4545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTATCCGCTGGTTTT	NA	False	NA	29	True	AATAAA	-32	NA	99537960	99559610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_99538163_99538510_99538805_99546600_99546797_99548802_99548876_99549545_99549659_99559162
ENSMUSG00000031226.14_104123381_104127093_1	chrX	+	913	6	NNC	ENSMUSG00000031226.14	novel	2638	6	NA	NA	0	327	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_5	559.857696205027	4277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATGACTGATCTTAGAAA	NA	False	NA	23	True	AATAAA	-20	NA	104123380	104127093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126628
ENSMUSG00000031226.14_104123381_104127093_2	chrX	+	920	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	19	1699	0	327	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	4269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATGACTGATCTTAGAAA	NA	False	NA	23	True	AATAAA	-20	NA	104123380	104127093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ENSMUSG00000031226.14_104123381_104160696_1	chrX	+	712	6	NNC	ENSMUSG00000031226.14	novel	1239	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	559.074950252647	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGCCAGAGTTCCTTTT	NA	False	NA	5	True	AATAAA	-20	NA	104123380	104160696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104160432
ENSMUSG00000031229.17_104919734_104972917_1	chrX	-	2438	9	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	-8	380	combination_of_known_junctions	FALSE	canonical	3	69	junction_8	63.7397050510904	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTACCCAAAGCTAAGC	NA	False	NA	NA	False	NA	NA	NA	104972917	104919733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ENSMUSG00000031229.17_104919734_104972917_2	chrX	-	2297	9	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	92	78513	-8	380	5prime_fragment	FALSE	canonical	3	37	junction_8	71.5454401062709	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTACCCAAAGCTAAGC	NA	False	NA	NA	False	NA	NA	NA	104972917	104919733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
ENSMUSG00000031229.17_104919734_104972969_1	chrX	-	2675	10	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	3	380	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	79.6478359892959	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTACCCAAAGCTAAGC	NA	False	NA	NA	False	NA	NA	NA	104972969	104919733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972564
ENSMUSG00000031229.17_104919734_104972969_2	chrX	-	2374	8	NIC	ENSMUSG00000031229.17	novel	916	8	NA	NA	3	380	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	90.6356239374486	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTACCCAAAGCTAAGC	NA	False	NA	NA	False	NA	NA	NA	104972969	104919733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972564
ENSMUSG00000031231.5_105059322_105065564_1	chrX	+	493	3	FSM	ENSMUSG00000031231.5	ENSMUST00000033582.5	1001	3	16	492	0	0	multi-exon	FALSE	canonical	3	7724	junction_1	851.5	58057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTTGTTTTTTTC	NA	False	NA	12	True	AATAAA	-24	NA	105059321	105065564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_105059477_105063184_105063310_105065351
ENSMUSG00000031232.18_105015002_105055410_1	chrX	-	1117	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	95	3312	-18	-918	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCAACTCACATATTTT	NA	False	NA	NA	False	AATAAA	-19	NA	105055410	105015001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ENSMUSG00000031242.8_106830948_106859940_1	chrX	-	1251	8	FSM	ENSMUSG00000031242.8	ENSMUST00000120722.2	5842	8	0	4591	0	495	multi-exon	TRUE	canonical	3	41	junction_6	7.21958786771044	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTCGCATAACCCAGAC	NA	False	NA	NA	False	AATAAA	-24	NA	106859940	106830947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_106831460_106831871_106831945_106834341_106834386_106836504_106836613_106836698_106836768_106837113_106837261_106851397_106851496_106859740
ENSMUSG00000031246.15_108139115_108206077_1	chrX	+	2738	4	FSM	ENSMUSG00000031246.15	ENSMUST00000033598.9	2882	4	144	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	2.86744175568088	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGATTACTTTTAATTT	NA	False	NA	NA	False	AATAAA	-18	NA	108139114	108206077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_108139244_108193520_108193707_108197911_108197993_108203735
ENSMUSG00000031256.12_132960083_132976612_1	chrX	+	2598	11	FSM	ENSMUSG00000031256.12	ENSMUST00000113286.8	2717	11	119	0	0	0	multi-exon	FALSE	canonical	3	451	junction_8	82.5556781814552	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGTTTTGCTTTTTAA	NA	False	NA	4	True	AATAAA	-19	NA	132960082	132976612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
ENSMUSG00000031256.12_132960083_132985210_1	chrX	+	1929	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	147	1585	0	-1585	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATATACATAATCCTTTT	NA	False	NA	30	True	AATAAA	-30	NA	132960082	132985210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ENSMUSG00000031256.12_132960083_132986135_1	chrX	+	2854	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	147	660	0	-660	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTCTGCATTAGGATTA	NA	False	NA	NA	False	NA	NA	NA	132960082	132986135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ENSMUSG00000031256.12_132960083_132987571_1	chrX	+	4290	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	147	-776	0	3	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	132960082	132987571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ENSMUSG00000031257.15_132960083_132987571_1	chrX	-	4368	14	NIC	ENSMUSG00000031257.15	novel	2563	13	NA	NA	24886	27087	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	799	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCACACTTCCGCGGCCG	NA	False	NA	NA	False	NA	NA	NA	132987571	132960082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ENSMUSG00000031262.13_133208904_133262732_2	chrX	+	2500	23	FSM	ENSMUSG00000031262.13	ENSMUST00000081064.12	3227	23	71	656	0	-653	multi-exon	FALSE	canonical	3	156	junction_9	42.2862392872416	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGGAAAACACAGAGTGAA	NA	False	NA	NA	False	CATAAA	-31	NA	133208903	133262732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ENSMUSG00000031262.13_133208904_133262842_1	chrX	+	2610	23	FSM	ENSMUSG00000031262.13	ENSMUST00000081064.12	3227	23	71	546	0	-543	multi-exon	FALSE	canonical	3	156	junction_9	42.2862392872416	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCATTTTTAAGGAGCAC	NA	False	NA	NA	False	NA	NA	NA	133208903	133262842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ENSMUSG00000031266.8_133490513_133501754_1	chrX	-	1432	7	NNC	ENSMUSG00000031266.8	novel	3015	7	NA	NA	0	-1578	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.4355659541429	739	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTTTTCAACATAGGCT	NA	False	NA	-15	True	AATAAA	-27	NA	133501754	133490512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_133490877_133491699_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
ENSMUSG00000031297.15_100122816_100128978_1	chrX	-	2237	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	421.361704418441	2859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACCTGTCCTGTTCTT	NA	False	NA	NA	False	ATTAAA	-23	NA	100128978	100122815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127874_100128877
ENSMUSG00000031297.15_100122816_100128978_2	chrX	-	2383	13	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_12	505.338500413337	2862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACCTGTCCTGTTCTT	NA	False	NA	NA	False	ATTAAA	-23	NA	100128978	100122815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128426_100128566_100128877
ENSMUSG00000031299.11_158906637_158921358_1	chrX	-	1365	11	FSM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	51	1432	-6	-1432	multi-exon	FALSE	canonical	3	1235	junction_1	109.21011857882	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGTATTTGGTGTAT	NA	False	NA	-10	True	AGTAAA	-18	NA	158921358	158906636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ENSMUSG00000031303.9_158905205_158921358_4	chrX	+	2792	11	NNC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	133776	15011	intron_retention	FALSE	non_canonical	0	0	junction_1	0	3111	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGCGGGCGTCCCCAA	3531	False	NA	NA	False	NA	NA	NA	158905204	158921358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_158906944_158907514_158907624_158909189_158909258_158910291_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ENSMUSG00000031303.9_158905205_158921358_5	chrX	+	2792	11	NNC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	133776	15011	intron_retention	FALSE	non_canonical	0	0	junction_1	0	3570	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGCGGGCGTCCCCAA	3531	False	NA	NA	False	NA	NA	NA	158905204	158921358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916224_158921251
ENSMUSG00000031303.9_158905205_158921358_6	chrX	+	2795	11	NNC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	133776	15011	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGCGGGCGTCCCCAA	3531	False	NA	NA	False	NA	NA	NA	158905204	158921358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910719_158911456_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ENSMUSG00000031303.9_158905205_158921358_7	chrX	+	2797	11	NNC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	133776	15011	intron_retention	FALSE	non_canonical	0	0	junction_1	0	4259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGCGGGCGTCCCCAA	3531	False	NA	NA	False	NA	NA	NA	158905204	158921358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916224_158921246
ENSMUSG00000031303.9_158905205_158921423_1	chrX	+	2860	11	NNC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	133776	15076	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1922	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGAGTCGCGACGGCATC	3531	False	NA	NA	False	NA	NA	NA	158905204	158921423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910719_158911456_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ENSMUSG00000031310.17_100447990_100457225_1	chrX	-	3317	14	ISM	ENSMUSG00000031310.17	ENSMUST00000121520.8	5564	25	6295	0	1300	0	3prime_fragment	FALSE	canonical	3	73	junction_5	11.9525689843416	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTTCTCTGGGGGA	NA	False	NA	-2	True	AATAAA	-14	NA	100457225	100447989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094
ENSMUSG00000031310.17_100458536_100463404_1	chrX	-	1547	6	NIC	ENSMUSG00000031310.17	novel	1859	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	47.9149246060139	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCAGCCTCTCCTTCCC	NA	False	NA	-1	True	NA	NA	NA	100463404	100458535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_100459013_100459366_100459545_100460514_100460582_100460892_100460937_100461878_100462559_100463303
ENSMUSG00000031310.17_100458536_100463451_1	chrX	-	1889	7	ISM	ENSMUSG00000031310.17	ENSMUST00000121520.8	5564	25	69	10546	-4	0	5prime_fragment	FALSE	canonical	3	74	junction_4	23.7065391822594	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCAGCCTCTCCTTCCC	NA	False	NA	-1	True	NA	NA	NA	100463451	100458535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463303
ENSMUSG00000031311.18_100473341_100492197_1	chrX	+	2409	12	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_9	1051.63693731909	12325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473340	100492197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488424_100488900_100488941_100489724_100489835_100491199
ENSMUSG00000031311.18_100473341_100492197_2	chrX	+	2382	12	FSM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	180	0	0	0	multi-exon	FALSE	canonical	3	3075	junction_4	297.011255595496	12350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473340	100492197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ENSMUSG00000031311.18_100473341_100492197_3	chrX	+	2376	12	NNC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1071.96669493101	12251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473340	100492197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483098_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ENSMUSG00000031327.11_102400082_102433356_1	chrX	+	1033	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	0	6342	0	-6342	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATCGTTAACACTAAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	102400081	102433356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
ENSMUSG00000031327.11_102400082_102433651_1	chrX	+	1328	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	0	6047	0	-6047	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGTAAATATTGTCTCT	NA	False	NA	NA	False	GATAAA	-18	NA	102400081	102433651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
ENSMUSG00000031328.17_73267069_73271226_1	chrX	-	1632	8	ISM	ENSMUSG00000031328.17	ENSMUST00000144429.8	8233	47	18778	2	0	0	3prime_fragment	FALSE	canonical	3	605	junction_7	64.8687843548303	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGCTTTCATGGAAGG	NA	False	NA	-5	True	AATAAA	-23	NA	73271226	73267068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096
ENSMUSG00000031333.8_103327438_103457452_1	chrX	-	2492	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	0	3175	0	-3175	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTCTTGTTCCTGCCCC	9861	False	NA	67	True	NA	NA	NA	103457452	103327437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ENSMUSG00000031337.17_70258634_70346971_1	chrX	+	2093	14	NNC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	0	4504	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_13	93.3887339099411	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGAGTATGGTCACAC	NA	False	NA	NA	False	ACTAAA	-1	NA	70258633	70346971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70346408
ENSMUSG00000031337.17_70258634_70358897_1	chrX	+	3422	15	NNC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	112.146496756225	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATTTCCAGGGCTATGA	NA	False	NA	12	True	AATAAA	-44	NA	70258633	70358897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_70258754_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339960_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ENSMUSG00000031347.13_71957310_71961940_1	chrX	-	1037	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	77	172	-50	0	multi-exon	FALSE	canonical	3	590	junction_4	36.4862987983161	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCATTCTTTAAAGGAT	NA	False	NA	-13	True	AATAAA	-17	NA	71961940	71957309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
ENSMUSG00000031352.11_168094526_168103125_1	chrX	-	2308	7	FSM	ENSMUSG00000031352.11	ENSMUST00000112115.2	2473	7	165	0	151	0	multi-exon	FALSE	canonical	3	158	junction_6	157.36096155725	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTAGAGTGATTTTTGT	NA	False	NA	0	True	AATAAA	-25	NA	168103125	168094525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168102971
ENSMUSG00000031353.14_161543398_161561791_1	chrX	+	1938	12	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	0	39	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_1	880.665788710427	5003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTGTTCTTTTAGA	NA	False	NA	7	True	AATAAA	-14	NA	161543397	161561791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_161543695_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ENSMUSG00000031353.14_161543398_161561791_2	chrX	+	1599	11	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	0	39	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	918.535486521887	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTGTTCTTTTAGA	NA	False	NA	7	True	AATAAA	-14	NA	161543397	161561791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_161543704_161544570_161544638_161552883_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ENSMUSG00000031353.14_161543398_161561791_3	chrX	+	716	5	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	0	39	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1307.16735730357	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTGTTCTTTTAGA	NA	False	NA	7	True	AATAAA	-14	NA	161543397	161561791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552810_161561722
ENSMUSG00000031353.14_161543458_161561791_1	chrX	+	1880	12	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	0	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	885.102263317028	4314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTGTTCTTTTAGA	NA	False	NA	7	True	AATAAA	-14	NA	161543457	161561791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556443_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ENSMUSG00000031353.14_161543458_161561791_3	chrX	+	1882	12	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	0	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	875.797950206997	4666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTGTTCTTTTAGA	NA	False	NA	7	True	AATAAA	-14	NA	161543457	161561791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_161543704_161544570_161544716_161551852_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ENSMUSG00000031353.14_161543458_161561791_5	chrX	+	992	5	NNC	ENSMUSG00000031353.14	novel	1430	10	NA	NA	0	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1307.16735730357	616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTGTTCTTTTAGA	NA	False	NA	7	True	AATAAA	-14	NA	161543457	161561791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552828_161561404
ENSMUSG00000031357.4_161639844_161671443_1	chrX	-	2296	9	FSM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	0	-209	0	209	multi-exon	FALSE	canonical	3	113	junction_1	15.2105021284637	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTGTACGTATTTATA	NA	False	NA	-3	True	AATAAA	-21	NA	161671443	161639843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055_161646205_161655510_161655651_161661326_161661401_161665675_161665743_161665963_161666083_161671064
ENSMUSG00000031358.18_167437843_167456894_1	chrX	-	1586	12	FSM	ENSMUSG00000031358.18	ENSMUST00000112137.2	2316	12	0	730	0	-725	multi-exon	FALSE	canonical	3	28	junction_9	6.17646827325928	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGCACTATGTGGCTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	167456894	167437842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167456723
ENSMUSG00000031360.15_161684601_161814333_1	chrX	+	2170	19	NNC	ENSMUSG00000031360.15	novel	3289	19	NA	NA	0	18	at_least_one_novel_splicesite	TRUE	canonical	2	11	junction_1	50.5288390945895	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTTGTGTTTTCTCCA	NA	False	NA	29	True	ATTAAA	-35	NA	161684600	161814333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_161684705_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUSG00000031360.15_161684601_161814333_2	chrX	+	2209	19	FSM	ENSMUSG00000031360.15	ENSMUST00000033727.14	3353	19	-27	1171	0	18	multi-exon	FALSE	canonical	2	133	junction_1	30.7828415409191	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTTGTGTTTTCTCCA	NA	False	NA	29	True	ATTAAA	-35	NA	161684600	161814333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUSG00000031362.18_72277685_72286736_1	chrX	-	1208	9	NNC	ENSMUSG00000031362.18	novel	1220	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_7	125.741736806042	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72286736	72277684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72285802_72286219_72286267_72286557
ENSMUSG00000031370.13_162722061_162741659_1	chrX	-	1527	10	ISM	ENSMUSG00000031370.13	ENSMUST00000112289.9	2735	11	-74	3622	-2	0	5prime_fragment	FALSE	canonical	3	131	junction_1	287.051077314917	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATTTTCAGTCTTCAG	NA	False	NA	NA	False	NA	NA	NA	162741659	162722060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
ENSMUSG00000031370.13_162722964_162741608_1	chrX	-	1276	9	ISM	ENSMUSG00000031370.13	ENSMUST00000112289.9	2735	11	-23	4525	-14	0	5prime_fragment	FALSE	canonical	3	144	junction_2	285.800383790855	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATACTCTTTTATTTCAT	NA	False	NA	NA	False	CATAAA	-17	NA	162741608	162722963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
ENSMUSG00000031370.13_162735609_162741158_1	chrX	-	1482	4	FSM	ENSMUSG00000031370.13	ENSMUST00000139166.2	504	4	0	-978	0	978	multi-exon	FALSE	canonical	3	635	junction_1	90.1566537878499	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	-10	True	AATATA	-15	NA	162741158	162735608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911
ENSMUSG00000031370.13_162735921_162741158_1	chrX	-	1170	4	FSM	ENSMUSG00000031370.13	ENSMUST00000139166.2	504	4	0	-666	0	666	multi-exon	FALSE	canonical	3	635	junction_1	90.1566537878499	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTATCCTGTCTAACTT	NA	False	NA	-15	True	ATTAAA	-28	NA	162741158	162735920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911
ENSMUSG00000031370.13_162735921_162741659_2	chrX	-	1229	6	NNC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-2	666	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	298.80789815532	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTATCCTGTCTAACTT	NA	False	NA	-15	True	ATTAAA	-28	NA	162741659	162735920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741439_162741602
ENSMUSG00000031371.15_72480921_72490885_1	chrX	-	718	3	ISM	ENSMUSG00000031371.15	ENSMUST00000131140.2	502	4	0	-2	0	0	intron_retention	FALSE	canonical	3	534	junction_2	19.5	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCCTTCGGACTACT	NA	False	NA	-12	True	AATAAA	-17	NA	72490885	72480920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_72481172_72489415_72489531_72490533
ENSMUSG00000031371.15_72480921_72502650_1	chrX	-	1375	10	NNC	ENSMUSG00000031371.15	novel	1380	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	176.740515662208	1744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCCTTCGGACTACT	NA	False	NA	-12	True	AATAAA	-17	NA	72502650	72480920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_72481172_72489415_72489531_72490538_72490744_72491565_72491663_72491797_72491957_72492416_72492509_72496604_72496667_72498472_72498541_72501579_72501696_72502440
ENSMUSG00000031379.14_163052569_163155783_1	chrX	+	1104	9	NIC	ENSMUSG00000031379.14	novel	1599	10	NA	NA	0	-224	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	80.2507788124203	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTTTTGTAATGAAT	NA	False	NA	NA	False	AATAAA	-23	NA	163052568	163155783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_163052674_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ENSMUSG00000031379.14_163052569_163155783_2	chrX	+	1233	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	142	224	0	-224	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTTTTGTAATGAAT	NA	False	NA	NA	False	AATAAA	-23	NA	163052568	163155783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ENSMUSG00000031379.14_163052569_163155905_1	chrX	+	1355	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	142	102	0	-102	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCCTGATACATGCAAA	NA	False	NA	NA	False	AATAAA	-25	NA	163052568	163155905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ENSMUSG00000031379.14_163052569_163156009_1	chrX	+	1459	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	142	-2	0	2	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTTTTTTATATGGG	NA	False	NA	NA	False	TATAAA	-17	NA	163052568	163156009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ENSMUSG00000031381.17_163202803_163216086_1	chrX	+	2371	6	FSM	ENSMUSG00000031381.17	ENSMUST00000112257.10	3212	6	20	821	0	-821	multi-exon	FALSE	canonical	3	48	junction_2	78.77715404862	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATATGTATTATTAATC	NA	False	NA	NA	False	TTTAAA	-13	NA	163202802	163216086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_163202837_163205579_163205983_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ENSMUSG00000031383.9_72683149_72687120_1	chrX	+	2598	4	FSM	ENSMUSG00000031383.9	ENSMUST00000019701.9	2722	4	124	0	124	0	multi-exon	FALSE	canonical	3	583	junction_1	9.62635271879577	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGAGGTTGTTGCTTCTT	NA	False	NA	28	True	AATAAA	-22	NA	72683148	72687120	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72683248_72683798_72684411_72684952_72685409_72685689
ENSMUSG00000031387.15_72965728_72974351_1	chrX	-	1318	11	NNC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	619.869994434317	4016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974351	72965727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971878_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
ENSMUSG00000031387.15_72965728_72974408_1	chrX	-	1293	10	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	225	junction_8	580.11297324607	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974408	72965727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72974013_72974124_72974319
ENSMUSG00000031387.15_72965728_72974408_2	chrX	-	162	3	NNC	ENSMUSG00000031387.15	novel	2125	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1021	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974408	72965727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_72965756_72974078_72974124_72974319
ENSMUSG00000031387.15_72971523_72974408_1	chrX	-	903	8	ISM	ENSMUSG00000031387.15	ENSMUST00000116578.8	1418	11	48	5796	-10	322	5prime_fragment	FALSE	canonical	3	1767	junction_4	164.44526413965	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCATTGACAAGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	72974408	72971522	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
ENSMUSG00000031393.17_73078894_73129225_1	chrX	-	1792	4	FSM	ENSMUSG00000031393.17	ENSMUST00000100750.10	10538	4	50	8696	-7	0	multi-exon	FALSE	canonical	3	104	junction_3	52.083266666624	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTAGAGTTTCGTGGC	NA	False	NA	NA	False	AATAAA	-22	NA	73129225	73078893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_73080101_73080587_73080939_73123514_73123639_73129115
ENSMUSG00000031400.11_73453089_73472487_1	chrX	-	2337	12	NNC	ENSMUSG00000031400.11	novel	2652	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	90.7045881642687	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTTGTTCTTTTC	NA	False	NA	-6	True	ATTAAA	-18	NA	73472487	73453088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458655_73471653_73471786_73472428
ENSMUSG00000031400.11_73456718_73472561_1	chrX	-	1378	5	FSM	ENSMUSG00000031400.11	ENSMUST00000135894.2	580	5	-106	-692	-75	692	multi-exon	FALSE	canonical	3	313	junction_4	6.68954408012983	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAACTCAATTAAAGTCAG	NA	False	NA	NA	False	TTTAAA	-7	NA	73472561	73456717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
ENSMUSG00000031402.13_74139659_74153383_1	chrX	-	2600	15	NNC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	8071	13680	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTGAGACCCGTCCG	NA	False	NA	NA	False	NA	NA	NA	74153383	74139658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149888_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUSG00000031402.13_74139659_74153383_2	chrX	-	2599	15	NNC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	8071	13680	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTGAGACCCGTCCG	NA	False	NA	NA	False	NA	NA	NA	74153383	74139658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_74139734_74140439_74140502_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUSG00000031402.13_74139659_74153383_3	chrX	-	2687	16	NIC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	8071	13680	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTGAGACCCGTCCG	NA	False	NA	NA	False	NA	NA	NA	74153383	74139658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_74139734_74140238_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUSG00000031402.13_74139659_74153383_4	chrX	-	2598	15	NNC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	8071	13680	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTGAGACCCGTCCG	NA	False	NA	NA	False	NA	NA	NA	74153383	74139658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144045_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUSG00000031402.13_74139659_74153383_5	chrX	-	3127	14	NIC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	8071	13680	intron_retention	FALSE	non_canonical	0	0	junction_1	0	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTGAGACCCGTCCG	NA	False	NA	NA	False	NA	NA	NA	74153383	74139658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUSG00000031402.13_74139659_74153383_6	chrX	-	2653	15	NIC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	8071	13680	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTGAGACCCGTCCG	NA	False	NA	NA	False	NA	NA	NA	74153383	74139658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_74139734_74140439_74140508_74140840_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUSG00000031402.13_74139659_74153383_7	chrX	-	2600	15	NNC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	8071	13680	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTGAGACCCGTCCG	NA	False	NA	NA	False	NA	NA	NA	74153383	74139658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146167_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUSG00000031402.13_74139659_74153383_8	chrX	-	3192	15	NIC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	8071	13680	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTGAGACCCGTCCG	NA	False	NA	NA	False	NA	NA	NA	74153383	74139658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUSG00000031402.13_74147762_74153383_1	chrX	-	1671	7	NNC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	8071	5577	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1960	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGAACCGGGAAAATGGCG	NA	False	NA	NA	False	NA	NA	NA	74153383	74147761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_74147807_74147945_74148067_74149259_74149379_74149888_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUSG00000031402.13_74153880_74174592_1	chrX	-	1954	12	FSM	ENSMUSG00000031402.13	ENSMUST00000033775.9	2525	12	30	541	0	374	multi-exon	FALSE	canonical	3	210	junction_6	19.4626151487859	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGACCCTGTAACTCCA	NA	False	NA	-6	True	AATAAA	-21	NA	74174592	74153879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191_74157273_74157839_74157921_74159661_74159769_74161361_74161559_74165040_74165110_74167501_74167588_74168976_74169056_74169342_74169487_74174330
ENSMUSG00000031402.13_74157009_74174567_1	chrX	-	1831	8	NIC	ENSMUSG00000031402.13	novel	1558	11	NA	NA	-8	162	intron_retention	FALSE	canonical	3	210	junction_2	21.3168516264787	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGTCCTGATTTCAGTCT	NA	False	NA	NA	False	NA	NA	NA	74174567	74157008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_74157921_74159661_74159769_74161361_74161559_74165040_74165110_74167501_74167588_74168976_74169056_74169342_74169487_74174330
ENSMUSG00000031403.15_74139659_74153383_1	chrX	+	2605	15	FSM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	199	0	0	0	multi-exon	FALSE	canonical	3	1536	junction_9	499.509294922813	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139658	74153383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUSG00000031403.15_74147762_74153383_1	chrX	+	1676	7	NNC	ENSMUSG00000031403.15	novel	610	3	NA	NA	-1793	0	at_least_one_novel_splicesite	FALSE	canonical	3	454	junction_1	848.656143558744	2194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74147761	74153383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_74147807_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUSG00000031403.15_74147762_74153383_2	chrX	+	1815	6	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	8302	0	-1793	0	3prime_fragment	FALSE	canonical	3	2464	junction_5	150.861525910353	3126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74147761	74153383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUSG00000031403.15_74147762_74153383_3	chrX	+	1751	7	NNC	ENSMUSG00000031403.15	novel	610	3	NA	NA	-1793	0	at_least_one_novel_splicesite	FALSE	canonical	3	102	junction_1	978.331643950841	3371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74147761	74153383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_74147882_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUSG00000031422.17_135633691_135642233_1	chrX	-	1819	4	FSM	ENSMUSG00000031422.17	ENSMUST00000033797.13	1996	4	177	0	-132	0	multi-exon	FALSE	canonical	3	68	junction_3	1439.93989072075	5451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642233	135633690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135642141
ENSMUSG00000031422.17_135634902_135642027_1	chrX	-	585	4	FSM	ENSMUSG00000031422.17	ENSMUST00000080411.13	1859	4	74	1200	-2	121	multi-exon	FALSE	canonical	3	2872	junction_1	198.526236721162	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAGCGAGGAGGCATTC	NA	False	NA	NA	False	AAGAAA	-23	NA	135642027	135634901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641958
ENSMUSG00000031429.15_139849693_139857438_1	chrX	-	915	5	FSM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	0	515	0	-515	multi-exon	FALSE	canonical	3	522	junction_1	39.0024037720754	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGGTTGTGGCTGTCC	NA	False	NA	-5	True	ATTAAA	-17	NA	139857438	139849692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548_139854648_139857302
ENSMUSG00000031431.14_139440277_139500197_1	chrX	-	2112	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1211	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	110.816164083685	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	AATAAA	-26	NA	139500197	139440276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139500148
ENSMUSG00000031431.14_139441011_139443936_1	chrX	-	1240	3	FSM	ENSMUSG00000031431.14	ENSMUST00000055738.12	1974	3	0	734	0	0	multi-exon	FALSE	canonical	3	154	junction_2	61	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCATCGTTTTTCTATA	NA	False	NA	NA	False	TATAAA	-17	NA	139443936	139441010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_139441857_139442853_139442906_139443594
ENSMUSG00000031432.4_139357362_139376889_1	chrX	+	1830	7	NNC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	167	junction_1	718.530541375166	3907	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	False	NA	27	True	AATAAA	-19	NA	139357361	139376889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_139357478_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
ENSMUSG00000031432.4_139357362_139376889_2	chrX	+	1968	7	NNC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	811.161444404805	5653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	False	NA	27	True	AATAAA	-19	NA	139357361	139376889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369714_139372747_139372920_139374527_139374688_139375917
ENSMUSG00000031447.8_13215863_13225338_1	chr8	+	1941	8	ISM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	6702	0	6702	0	3prime_fragment	FALSE	canonical	3	2592	junction_5	155.051012013887	1438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGTGTCCTTCTGTGAC	NA	False	NA	21	True	AATAAA	-22	NA	13215862	13225338	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
ENSMUSG00000031447.8_13222022_13250587_1	chr8	+	1590	8	NIC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	-1159	25249	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCGCCGCTGGCCCCGGG	NA	False	NA	NA	False	NA	NA	NA	13222021	13250587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_13222613_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ENSMUSG00000031467.11_18896493_18931986_1	chr8	+	1192	8	FSM	ENSMUSG00000031467.11	ENSMUST00000033847.5	2841	8	198	1451	198	-1451	multi-exon	FALSE	canonical	0	0	junction_7	241.544266446259	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCTGCAGTCACAGTCT	NA	False	NA	14	True	ATTAAA	-14	NA	18896492	18931986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929749_18931753
ENSMUSG00000031467.11_18896550_18932068_1	chr8	+	1217	8	FSM	ENSMUSG00000031467.11	ENSMUST00000033847.5	2841	8	255	1369	255	-1369	multi-exon	FALSE	canonical	0	0	junction_7	241.544266446259	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTTTTGTTTTGTTT	NA	False	NA	14	True	ATTAAA	-18	NA	18896549	18932068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929749_18931753
ENSMUSG00000031467.11_18896550_18933437_1	chr8	+	2586	8	FSM	ENSMUSG00000031467.11	ENSMUST00000033847.5	2841	8	255	0	255	0	multi-exon	FALSE	canonical	0	0	junction_7	241.544266446259	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTTGTTTTTTCAA	NA	False	NA	15	True	AATAAA	-25	NA	18896549	18933437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929749_18931753
ENSMUSG00000031483.9_27513835_27528206_1	chr8	+	2680	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	8	2150	0	1565	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTTCTCATTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	27513834	27528206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ENSMUSG00000031483.9_27513835_27529164_1	chr8	+	3638	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	8	1192	0	-1192	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTTTGTACTTCCAT	NA	False	NA	10	True	TATAAA	-16	NA	27513834	27529164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ENSMUSG00000031483.9_27513835_27529465_1	chr8	+	3939	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	8	891	0	-891	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACCAGTAGATTGGAGGA	NA	False	NA	35	True	AATAAA	-32	NA	27513834	27529465	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ENSMUSG00000031487.6_27613854_27618641_1	chr8	-	1370	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	67	462	0	379	multi-exon	FALSE	canonical	3	75	junction_1	8.9938250421547	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTTGGCTTTTCTTTT	NA	False	NA	NA	False	AAGAAA	-1	NA	27618641	27613853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
ENSMUSG00000031489.16_27715804_27717568_2	chr8	-	1149	3	NIC	ENSMUSG00000031489.16	novel	1864	3	NA	NA	954	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	26.5	512	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27717568	27715803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_27716498_27716753_27716925_27717284
ENSMUSG00000031489.16_27715804_27717624_1	chr8	-	1015	3	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	898	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	38.5	455	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27717624	27715803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_27716411_27716753_27716822_27717284
ENSMUSG00000031489.16_27734496_27740879_1	chr8	-	1449	3	NNC	ENSMUSG00000031489.16	novel	669	4	NA	NA	-235	-15232	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	11.5	249	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	27740879	27734495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_27735521_27739175_27739238_27740517
ENSMUSG00000031490.7_27733085_27765543_1	chr8	+	728	3	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	-17272	17	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	7504.5	869	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCCACAGCTGGGCC	NA	False	NA	17	True	AATAAA	-17	NA	27733084	27765543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_27733197_27763350_27763531_27765107
ENSMUSG00000031490.7_27750357_27765543_1	chr8	+	831	3	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	0	17	at_least_one_novel_splicesite	FALSE	canonical	3	634	junction_1	7191	11732	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCCACAGCTGGGCC	NA	False	NA	17	True	AATAAA	-17	NA	27750356	27765543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_27750579_27763357_27763531_27765107
ENSMUSG00000031490.7_27750357_27765543_2	chr8	+	822	3	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	0	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7188.5	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCCACAGCTGGGCC	NA	False	NA	17	True	AATAAA	-17	NA	27750356	27765543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_27750579_27763350_27763535_27765127
ENSMUSG00000031490.7_27750357_27765543_3	chr8	+	853	3	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	0	17	at_least_one_novel_splicesite	FALSE	canonical	3	189	junction_2	7094	1990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCCACAGCTGGGCC	NA	False	NA	17	True	AATAAA	-17	NA	27750356	27765543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_27750579_27763350_27763546_27765107
ENSMUSG00000031490.7_27750357_27765543_4	chr8	+	833	3	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	0	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7188.5	1470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCCACAGCTGGGCC	NA	False	NA	17	True	AATAAA	-17	NA	27750356	27765543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_27750579_27763350_27763546_27765127
ENSMUSG00000031490.7_27750357_27765543_5	chr8	+	834	3	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	0	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7188.5	2292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCCACAGCTGGGCC	NA	False	NA	17	True	AATAAA	-17	NA	27750356	27765543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_27750579_27763350_27763535_27765115
ENSMUSG00000031490.7_27750357_27765543_6	chr8	+	836	3	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	0	17	at_least_one_novel_splicesite	FALSE	canonical	1	215	junction_2	7081	17204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCCACAGCTGGGCC	NA	False	NA	17	True	AATAAA	-17	NA	27750356	27765543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_27750579_27763350_27763535_27765113
ENSMUSG00000031490.7_27750357_27765606_1	chr8	+	899	3	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	0	80	at_least_one_novel_splicesite	FALSE	canonical	1	215	junction_2	7081	20123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTCCAGTGTTTATG	NA	False	NA	-45	True	NA	NA	NA	27750356	27765606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_27750579_27763350_27763535_27765113
ENSMUSG00000031490.7_27750357_27765673_1	chr8	+	966	3	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	0	147	at_least_one_novel_splicesite	FALSE	canonical	1	215	junction_2	7081	20302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGTAATCTATCTATCT	NA	False	NA	22	True	AAAAAG	-15	NA	27750356	27765673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_27750579_27763350_27763535_27765113
ENSMUSG00000031505.12_11547568_11563287_1	chr8	+	1239	10	NNC	ENSMUSG00000031505.12	novel	1307	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	87.5442745129572	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	33	True	NA	NA	NA	11547567	11563287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561882_11561998_11562894
ENSMUSG00000031505.12_11547568_11563287_2	chr8	+	1325	9	NIC	ENSMUSG00000031505.12	novel	1307	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	162	junction_1	41.5120464443756	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	33	True	NA	NA	NA	11547567	11563287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559558_11560226_11560348_11561876_11561998_11562894
ENSMUSG00000031505.12_11564021_11580409_1	chr8	+	1124	9	NIC	ENSMUSG00000031505.12	novel	2830	9	NA	NA	1635	15449	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCAGAGTCACCTGCT	5561	False	NA	NA	False	NA	NA	NA	11564020	11580409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294
ENSMUSG00000031505.12_11564021_11580532_1	chr8	+	1247	9	NIC	ENSMUSG00000031505.12	novel	2830	9	NA	NA	1635	15572	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTGCTCCACTCCTAAC	5561	False	NA	NA	False	NA	NA	NA	11564020	11580532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294
ENSMUSG00000031508.15_11661583_11685036_1	chr8	-	2280	7	NIC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	194.263280684287	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685036	11661582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11684810
ENSMUSG00000031508.15_11661583_11685736_1	chr8	-	2380	7	FSM	ENSMUSG00000031508.15	ENSMUST00000210530.2	2398	7	18	0	18	0	multi-exon	FALSE	canonical	3	111	junction_4	160.305350988529	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685736	11661582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11685410
ENSMUSG00000031508.15_11661583_11685736_2	chr8	-	2268	6	FSM	ENSMUSG00000031508.15	ENSMUST00000033905.13	2285	6	18	-1	18	0	multi-exon	FALSE	canonical	3	209	junction_3	111.790876193006	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685736	11661582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
ENSMUSG00000031508.15_11676367_11685757_1	chr8	-	2664	3	FSM	ENSMUSG00000031508.15	ENSMUST00000211389.2	1359	3	-3	-1302	0	1302	multi-exon	FALSE	canonical	3	398	junction_2	21.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTGCCTAGGTCTATAA	NA	False	NA	NA	False	NA	NA	NA	11685757	11676366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_11678531_11682865_11683019_11685410
ENSMUSG00000031513.9_34602726_34613941_1	chr8	-	2633	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	246	0	246	0	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGCTTGTGGGTGTTTT	9032	False	NA	-4	True	AATAAA	-16	NA	34613941	34602725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
ENSMUSG00000031513.9_34604445_34613941_1	chr8	-	914	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	246	1719	246	-1719	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTTCATTCAGTCAG	9032	False	NA	1	True	ATTAAA	-18	NA	34613941	34604444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
ENSMUSG00000031513.9_34604687_34613941_1	chr8	-	672	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	246	1961	246	-1961	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCTGGTTTCCCACTT	9032	False	NA	-3	True	ATTAAA	-22	NA	34613941	34604686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
ENSMUSG00000031516.12_34557574_34575617_1	chr8	-	919	7	FSM	ENSMUSG00000031516.12	ENSMUST00000033913.11	1249	7	333	-3	0	0	multi-exon	FALSE	canonical	3	293	junction_6	39.9485780584101	1591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCCTCAATTTCCATT	NA	False	NA	0	True	AATAAA	-31	NA	34575617	34557573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_34557997_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573561_34575572
ENSMUSG00000031516.12_34557574_34575617_2	chr8	-	913	7	NNC	ENSMUSG00000031516.12	novel	1249	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	145.345183003161	1574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCCTCAATTTCCATT	NA	False	NA	0	True	AATAAA	-31	NA	34575617	34557573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_34557991_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573561_34575572
ENSMUSG00000031519.5_54975083_54983033_1	chr8	+	1851	5	NIC	ENSMUSG00000031519.5	novel	425	3	NA	NA	-7532	-53639	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGCGCACGTCCCGCCCC	NA	False	NA	NA	False	NA	NA	NA	54975082	54983033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_54976431_54977975_54978092_54979485_54979563_54981376_54981451_54982797
ENSMUSG00000031519.5_54976254_54983033_2	chr8	+	680	5	NIC	ENSMUSG00000031519.5	novel	425	3	NA	NA	-6361	-53639	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGCGCACGTCCCGCCCC	NA	False	NA	NA	False	NA	NA	NA	54976253	54983033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_54976431_54977975_54978092_54979485_54979563_54981376_54981451_54982797
ENSMUSG00000031520.7_54530752_54639486_1	chr8	+	1693	7	FSM	ENSMUSG00000031520.7	ENSMUST00000033919.6	2449	7	111	645	0	-645	multi-exon	FALSE	canonical	3	36	junction_4	8.69386757049665	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATGAAGTTCAGTCTTTT	1132	False	NA	NA	False	AATAAA	-19	NA	54530751	54639486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_54530961_54609992_54610195_54612327_54612519_54622059_54622212_54633736_54633844_54634121_54634456_54638988
ENSMUSG00000031521.6_53964833_53976457_1	chr8	+	1172	9	NIC	ENSMUSG00000031521.6	novel	2250	10	NA	NA	0	1	combination_of_known_splicesites	TRUE	canonical	3	23	junction_6	114.178314490975	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTCTACTTCCTTA	NA	False	NA	23	True	AATAAA	-17	NA	53964832	53976457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972005_53973271_53973380_53974084_53974219_53976210
ENSMUSG00000031523.17_37051237_37081050_1	chr8	-	1441	5	ISM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	47	16332	-22	9148	5prime_fragment	FALSE	canonical	3	26	junction_3	8.33666600026653	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACCTTCCCTAAGGCCCT	NA	False	NA	NA	False	NA	NA	NA	37081050	37051236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
ENSMUSG00000031523.17_37051831_37081050_1	chr8	-	847	5	ISM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	47	16926	-22	8554	5prime_fragment	FALSE	canonical	3	26	junction_3	8.33666600026653	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCGTCATCAGCGTCTG	NA	False	NA	NA	False	NA	NA	NA	37081050	37051830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
ENSMUSG00000031523.17_37052010_37081050_1	chr8	-	668	5	ISM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	47	17105	-22	8375	5prime_fragment	FALSE	canonical	3	26	junction_3	8.33666600026653	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATCCAATCCCTGGGTCC	NA	False	NA	NA	False	NA	NA	NA	37081050	37052009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
ENSMUSG00000031533.5_22901414_22919496_1	chr8	+	1288	7	NNC	ENSMUSG00000031533.5	novel	1515	7	NA	NA	0	-185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	278.788101531532	2167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCTGTGTTGATCATTG	NA	False	NA	15	True	ATTAAA	-24	NA	22901413	22919496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_22901596_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
ENSMUSG00000031533.5_22901414_22919496_2	chr8	+	836	4	NNC	ENSMUSG00000031533.5	novel	2625	5	NA	NA	0	-185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	352.506264719745	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCTGTGTTGATCATTG	NA	False	NA	15	True	ATTAAA	-24	NA	22901413	22919496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_22901601_22904731_22905020_22909742_22909902_22919294
ENSMUSG00000031533.5_22901414_22919496_3	chr8	+	1288	7	NNC	ENSMUSG00000031533.5	novel	1515	7	NA	NA	0	-185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	278.788101531532	2209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCTGTGTTGATCATTG	NA	False	NA	15	True	ATTAAA	-24	NA	22901413	22919496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_22901601_22904736_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
ENSMUSG00000031533.5_22901414_22919496_4	chr8	+	1286	7	NNC	ENSMUSG00000031533.5	novel	1515	7	NA	NA	0	-185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	286.685900517545	1855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCTGTGTTGATCATTG	NA	False	NA	15	True	ATTAAA	-24	NA	22901413	22919496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_22901601_22904731_22905020_22909749_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
ENSMUSG00000031533.5_22901414_22919496_5	chr8	+	1285	7	NNC	ENSMUSG00000031533.5	novel	1515	7	NA	NA	0	-185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	284.622361891839	1430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCTGTGTTGATCATTG	NA	False	NA	15	True	ATTAAA	-24	NA	22901413	22919496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914370_22914437_22917763_22917908_22919196
ENSMUSG00000031536.7_23118142_23143434_1	chr8	-	1146	14	NNC	ENSMUSG00000031536.7	novel	1201	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	51.8827763829876	1177	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTTAACAAATGTGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	23143434	23118141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127116_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
ENSMUSG00000031536.7_23118142_23143434_2	chr8	-	1196	14	NNC	ENSMUSG00000031536.7	novel	1201	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	56.8945874652434	1241	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTTAACAAATGTGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	23143434	23118141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127171_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140567_23143075_23143134_23143329
ENSMUSG00000031536.7_23143077_23143434_1	chr8	-	162	2	ISM	ENSMUSG00000031536.7	ENSMUST00000210950.2	3354	9	17	15849	0	-15849	5prime_fragment	FALSE	canonical	3	211	junction_1	0	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACGTTGTTAGCCGGCGT	NA	False	NA	NA	False	NA	NA	NA	23143434	23143076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_23143134_23143329
ENSMUSG00000031539.7_23279285_23295627_1	chr8	-	1447	9	FSM	ENSMUSG00000031539.7	ENSMUST00000210656.2	3373	9	11	1915	-7	-1915	multi-exon	FALSE	canonical	3	19	junction_1	1.96452920568771	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCGTTCCCTCCGGGCTC	NA	False	NA	NA	False	AGTAAA	-19	NA	23295627	23279284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23287097_23287236_23289656_23289829_23293775_23294119_23295591
ENSMUSG00000031546.7_23716460_23727675_1	chr8	-	1521	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	0	-172	0	172	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	2167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGCTAACCAATGTCTT	NA	False	NA	NA	False	NA	NA	NA	23727675	23716459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
ENSMUSG00000031546.7_23716844_23727675_1	chr8	-	1137	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	0	212	0	-212	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTCTACTACTTACTG	NA	False	NA	-3	True	AATAAA	-24	NA	23727675	23716843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
ENSMUSG00000031546.7_23716844_23727675_2	chr8	-	986	8	NNC	ENSMUSG00000031546.7	novel	1349	8	NA	NA	0	-212	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	221.432350198172	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTCTACTACTTACTG	NA	False	NA	-3	True	AATAAA	-24	NA	23727675	23716843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727636
ENSMUSG00000031556.7_25507275_25512906_1	chr8	+	863	4	FSM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	48	370	0	0	multi-exon	FALSE	canonical	3	225	junction_1	26.3185612575358	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACCAAGTTTTTCACCCC	NA	False	NA	NA	False	NA	NA	NA	25507274	25512906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_25507609_25508081_25508170_25510454_25510571_25512581
ENSMUSG00000031557.17_25530856_25591802_1	chr8	-	3264	12	FSM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	199	0	-15	0	multi-exon	FALSE	canonical	0	0	junction_11	42.7701912106826	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAACTTTTGTGTGTTT	5810	False	NA	20	True	NA	NA	NA	25591802	25530855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591675
ENSMUSG00000031557.17_25530856_25592170_1	chr8	-	3258	12	FSM	ENSMUSG00000031557.17	ENSMUST00000064883.14	5176	12	222	1696	0	0	multi-exon	FALSE	canonical	3	27	junction_11	35.6008635794598	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAACTTTTGTGTGTTT	9910	False	NA	20	True	NA	NA	NA	25592170	25530855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25592049
ENSMUSG00000031557.17_25532091_25591802_1	chr8	-	2029	12	FSM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	199	1235	-15	869	multi-exon	FALSE	canonical	0	0	junction_11	42.7701912106826	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGAATCATGTCGTCCT	5810	False	NA	NA	False	ATTAAA	-15	NA	25591802	25532090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591675
ENSMUSG00000031562.16_48563200_48590562_1	chr8	+	622	4	FSM	ENSMUSG00000031562.17	ENSMUST00000173991.8	786	4	0	164	0	-164	multi-exon	FALSE	canonical	3	319	junction_1	45.0209827623619	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTATTTCTCGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	48563199	48590562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292
ENSMUSG00000031562.16_48563200_48594700_1	chr8	+	1889	6	FSM	ENSMUSG00000031562.17	ENSMUST00000170263.10	2096	6	207	0	0	0	multi-exon	FALSE	canonical	3	319	junction_1	42.4480859403578	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	10	True	ATTAAA	-16	NA	48563199	48594700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ENSMUSG00000031562.16_48563200_48594700_2	chr8	+	1867	7	NNC	ENSMUSG00000031562.17	novel	2096	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	140.865676759418	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	10	True	ATTAAA	-16	NA	48563199	48594700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377_48594014_48594035
ENSMUSG00000031562.16_48563403_48594700_1	chr8	+	1954	6	NIC	ENSMUSG00000031562.17	novel	1126	5	NA	NA	157	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	132.43775896624	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	10	True	ATTAAA	-16	NA	48563402	48594700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_48563552_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ENSMUSG00000031575.19_26307346_26337722_1	chr8	-	1895	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	0	442	0	-332	multi-exon	FALSE	canonical	3	3119	junction_12	186.058007680998	2737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGCAGTACACTTTGA	NA	False	NA	-2	True	TATAAA	-21	NA	26337722	26307345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ENSMUSG00000031577.11_31640343_31650117_1	chr8	+	2168	7	FSM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	0	965	0	-965	multi-exon	FALSE	canonical	3	124	junction_5	19.2476549798208	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCTCTTCTATTTGT	NA	False	NA	6	True	ATTAAA	-17	NA	31640342	31650117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909
ENSMUSG00000031577.11_31649491_31658736_1	chr8	+	1839	10	NNC	ENSMUSG00000031577.11	novel	5039	8	NA	NA	9123	4006	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGACCGGGGAAGCGGCC	NA	False	NA	NA	False	NA	NA	NA	31649490	31658736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_31650606_31650786_31650853_31651749_31651864_31653058_31653127_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ENSMUSG00000031577.11_31649491_31658792_1	chr8	+	1835	10	NNC	ENSMUSG00000031577.11	novel	5039	8	NA	NA	9123	4062	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTATCGCGAGAACGTCT	NA	False	NA	NA	False	NA	NA	NA	31649490	31658792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656156_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ENSMUSG00000031577.11_31649491_31658792_2	chr8	+	1895	10	NNC	ENSMUSG00000031577.11	novel	5039	8	NA	NA	9123	4062	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTATCGCGAGAACGTCT	NA	False	NA	NA	False	NA	NA	NA	31649490	31658792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_31650606_31650786_31650853_31651749_31651864_31653058_31653127_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ENSMUSG00000031577.11_31649625_31658792_1	chr8	+	1768	10	NIC	ENSMUSG00000031577.11	novel	5039	8	NA	NA	9257	4062	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTATCGCGAGAACGTCT	NA	False	NA	NA	False	NA	NA	NA	31649624	31658792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ENSMUSG00000031578.6_31649491_31658736_2	chr8	-	1841	10	NNC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_7	230.904073931199	1313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGTCTTGAGAATTCTG	NA	False	NA	-2	True	TATAAA	-20	NA	31658736	31649490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656462_31656550_31656661_31656737_31656788_31658692
ENSMUSG00000031578.6_31649491_31658792_1	chr8	-	1897	10	NNC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_7	230.904073931199	2493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGTCTTGAGAATTCTG	NA	False	NA	-2	True	TATAAA	-20	NA	31658792	31649490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656462_31656550_31656661_31656737_31656788_31658692
ENSMUSG00000031578.6_31649625_31658736_1	chr8	-	1707	10	NNC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	-6	-134	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_7	230.904073931199	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGCTCTAGCTCTACAT	NA	False	NA	-20	True	AATAAA	-15	NA	31658736	31649624	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656462_31656550_31656661_31656737_31656788_31658692
ENSMUSG00000031578.6_31650399_31658792_1	chr8	-	994	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	0	908	0	-908	multi-exon	FALSE	canonical	3	742	junction_2	38.8285245790727	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCTCTTGTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	31658792	31650398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ENSMUSG00000031585.14_34221861_34266847_1	chr8	+	1289	8	FSM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	0	345	0	41	multi-exon	FALSE	canonical	3	438	junction_1	317.681974204855	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGTGTCTGCTATTTAT	5025	False	NA	2	True	NA	NA	NA	34221860	34266847	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ENSMUSG00000031585.14_34221861_34266993_1	chr8	+	1435	8	FSM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	0	199	0	187	multi-exon	FALSE	canonical	3	438	junction_1	317.681974204855	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTTAAGAAGTTAGGAA	5025	False	NA	18	True	AATAAA	-15	NA	34221860	34266993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ENSMUSG00000031585.14_34222122_34266847_1	chr8	+	1169	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	52	345	-39	41	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGTGTCTGCTATTTAT	5286	False	NA	2	True	NA	NA	NA	34222121	34266847	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ENSMUSG00000031585.14_34222122_34266993_1	chr8	+	1315	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	52	199	-39	187	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	1680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTTAAGAAGTTAGGAA	5286	False	NA	18	True	AATAAA	-15	NA	34222121	34266993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ENSMUSG00000031586.18_34274094_34319079_2	chr8	-	525	5	NNC	ENSMUSG00000031586.18	novel	643	6	NA	NA	14620	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	401.900796217176	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATTTTAAGAAATGTGT	NA	False	NA	NA	False	AATAAA	-24	NA	34319079	34274093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34318982
ENSMUSG00000031586.18_34293967_34419618_1	chr8	-	824	7	FSM	ENSMUSG00000031586.18	ENSMUST00000033995.14	1039	7	215	0	-198	0	multi-exon	FALSE	canonical	3	456	junction_1	404.856524654791	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTACAGCGTTTTTGGTT	NA	False	NA	-7	True	AATAAA	-36	NA	34419618	34293966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_34294211_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ENSMUSG00000031590.9_41850496_41870135_1	chr8	-	1043	10	NNC	ENSMUSG00000031590.9	novel	1039	9	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	308.211968106287	3209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTTCTCGAGTCCTTT	NA	False	NA	-7	True	AATAAA	-23	NA	41870135	41850495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_41850549_41850568_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
ENSMUSG00000031590.9_41850496_41870135_2	chr8	-	1056	9	NNC	ENSMUSG00000031590.9	novel	1039	9	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	323.702795786505	3220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTTCTCGAGTCCTTT	NA	False	NA	-7	True	AATAAA	-23	NA	41870135	41850495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867904_41869936
ENSMUSG00000031591.15_41793698_41827686_1	chr8	-	2185	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	124	464	-14	0	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	3250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCAGTCATGCATGCTG	7625	False	NA	-21	True	AATAAA	-18	NA	41827686	41793697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ENSMUSG00000031591.15_41793854_41827686_1	chr8	-	2029	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	124	620	-14	-156	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	2582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATGTATTTATGAAAACT	7625	False	NA	NA	False	AATATA	-21	NA	41827686	41793853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ENSMUSG00000031591.15_41794648_41827686_1	chr8	-	1235	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	124	1414	-14	-301	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGGCTGGTGAGCACA	7625	False	NA	NA	False	NA	NA	NA	41827686	41794647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ENSMUSG00000031592.11_41692789_41712110_1	chr8	+	610	4	ISM	ENSMUSG00000031592.11	ENSMUST00000211090.2	2631	10	0	16021	0	-193	5prime_fragment	FALSE	canonical	3	142	junction_3	8.49836585598797	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGCTAACAACAAACGTCAG	NA	False	NA	NA	False	NA	NA	NA	41692788	41712110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073
ENSMUSG00000031592.11_41692789_41746721_1	chr8	+	4150	23	ISM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	-26	38408	0	18590	5prime_fragment	TRUE	canonical	3	93	junction_5	27.7067360607578	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAGTAACTAAAACATTT	NA	False	NA	NA	False	NA	NA	NA	41692788	41746721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494
ENSMUSG00000031594.10_41644471_41662415_1	chr8	-	877	5	NNC	ENSMUSG00000031594.10	novel	1120	8	NA	NA	5775	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.05702071979286	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGGCCATGGTAATTGT	NA	False	NA	NA	False	AATAAA	-33	NA	41662415	41644470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_41644718_41649994_41650183_41650350_41650440_41653481_41653642_41662222
ENSMUSG00000031600.12_40964824_40999587_1	chr8	+	1791	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	0	4211	0	3	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGCTAATTTTTAATAT	NA	False	NA	16	True	ATTAAA	-16	NA	40964823	40999587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ENSMUSG00000031601.17_40946848_40964761_1	chr8	-	1314	7	FSM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	34	1267	-2	207	multi-exon	FALSE	canonical	3	422	junction_2	67.4388612003495	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGCCTTAATTTAATACA	NA	False	NA	NA	False	AATAAA	-22	NA	40964761	40946847	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
ENSMUSG00000031604.11_65171173_65186615_1	chr8	-	1833	6	FSM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	211	0	0	0	multi-exon	TRUE	canonical	3	690	junction_2	21.3822356174466	2400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCTGTTTTTTCC	NA	False	NA	-17	True	AATAAA	-1	NA	65186615	65171172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65186541
ENSMUSG00000031604.11_65171173_65186615_2	chr8	-	1684	5	NIC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	300.648777645944	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCTGTTTTTTCC	NA	False	NA	-17	True	AATAAA	-1	NA	65186615	65171172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_65172216_65173375_65173531_65175497_65175625_65180657_65180943_65186541
ENSMUSG00000031609.4_57935741_57940498_1	chr8	-	782	4	FSM	ENSMUSG00000031609.4	ENSMUST00000034022.4	1178	4	396	0	396	0	multi-exon	FALSE	canonical	3	1617	junction_3	52.2961651451508	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGCTTCAGCCTGTTT	NA	False	NA	97	True	AATAAA	-14	NA	57940498	57935740	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_57936085_57938075_57938175_57938543_57938670_57940285
ENSMUSG00000031628.10_47070477_47092724_1	chr8	+	1493	8	NNC	ENSMUSG00000031628.10	novel	2601	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	107.579680958358	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	False	NA	21	True	CATAAA	-17	NA	47070476	47092724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_47070532_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953_47091180_47092131
ENSMUSG00000031628.10_47070477_47092724_2	chr8	+	1472	8	NNC	ENSMUSG00000031628.10	novel	2601	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	90.2784807228869	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	False	NA	21	True	CATAAA	-17	NA	47070476	47092724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953_47091181_47092158
ENSMUSG00000031628.10_47070477_47092724_3	chr8	+	2445	7	FSM	ENSMUSG00000031628.10	ENSMUST00000093517.7	1520	7	47	-972	0	0	multi-exon	FALSE	canonical	3	47	junction_1	80.3189821205977	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	False	NA	21	True	CATAAA	-17	NA	47070476	47092724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_47070532_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
ENSMUSG00000031628.10_47070477_47092724_4	chr8	+	2450	7	FSM	ENSMUSG00000031628.10	ENSMUST00000211115.2	2601	7	151	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	22.2816566310098	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	False	NA	21	True	CATAAA	-17	NA	47070476	47092724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
ENSMUSG00000031628.10_47070477_47092724_5	chr8	+	694	3	NNC	ENSMUSG00000031628.10	novel	583	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	110.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	False	NA	21	True	CATAAA	-17	NA	47070476	47092724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_47070537_47082768_47082837_47092158
ENSMUSG00000031628.10_47070477_47092724_6	chr8	+	1459	8	NNC	ENSMUSG00000031628.10	novel	2601	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	90.2784807228869	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	False	NA	21	True	CATAAA	-17	NA	47070476	47092724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953_47091168_47092158
ENSMUSG00000031628.10_47070477_47092724_7	chr8	+	1467	8	NNC	ENSMUSG00000031628.10	novel	2601	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	107.579680958358	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	False	NA	21	True	CATAAA	-17	NA	47070476	47092724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_47070532_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953_47091181_47092158
ENSMUSG00000031628.10_47070477_47092724_8	chr8	+	202	3	NNC	ENSMUSG00000031628.10	novel	583	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	23.5	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	False	NA	21	True	CATAAA	-17	NA	47070476	47092724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_47070532_47082768_47082837_47092645
ENSMUSG00000031628.10_47070477_47092724_9	chr8	+	1496	8	NNC	ENSMUSG00000031628.10	novel	2601	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	90.2784807228869	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	False	NA	21	True	CATAAA	-17	NA	47070476	47092724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953_47091178_47092131
ENSMUSG00000031629.15_47031632_47070235_1	chr8	+	2225	15	Fusion	ENSMUSG00000110270.2_ENSMUSG00000031629.15	novel	3010	14	NA	NA	5424	11237	multi-exon	FALSE	non_canonical	0	0	junction_1	0	281	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCGCGCGAGGGGGCGG	NA	False	NA	NA	False	NA	NA	NA	47031631	47070235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr8_+_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47066758_47066893_47070168
ENSMUSG00000031629.15_47031632_47070235_2	chr8	+	1993	13	Fusion	ENSMUSG00000110270.2_ENSMUSG00000031629.15	novel	2931	13	NA	NA	5424	11237	multi-exon	FALSE	non_canonical	0	0	junction_1	0	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCGCGCGAGGGGGCGG	NA	False	NA	NA	False	NA	NA	NA	47031631	47070235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr8_+_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47063474_47063661_47065404_47065482_47070168
ENSMUSG00000031629.15_47031632_47070235_3	chr8	+	1857	13	Fusion	ENSMUSG00000110270.2_ENSMUSG00000031629.15	novel	2931	13	NA	NA	5424	11237	multi-exon	FALSE	non_canonical	0	0	junction_1	0	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCGCGCGAGGGGGCGG	NA	False	NA	NA	False	NA	NA	NA	47031631	47070235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr8_+_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ENSMUSG00000031633.5_46660210_46664067_1	chr8	-	1295	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	254	376	0	-376	multi-exon	FALSE	canonical	3	7531	junction_1	145.363911156334	28617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATCTCCCTGCCCTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	46664067	46660209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
ENSMUSG00000031633.5_46660210_46664067_2	chr8	-	1235	5	NNC	ENSMUSG00000031633.5	novel	1925	4	NA	NA	0	-376	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3341.33329488395	26821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATCTCCCTGCCCTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	46664067	46660209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848_46663969_46664028
ENSMUSG00000031633.5_46660376_46664067_1	chr8	-	1069	5	NNC	ENSMUSG00000031633.5	novel	1925	4	NA	NA	0	-542	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3341.33329488395	15075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCATTGAGTATTCATT	NA	False	NA	0	True	GATAAA	-32	NA	46664067	46660375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848_46663969_46664028
ENSMUSG00000031633.5_46660493_46664067_1	chr8	-	952	5	NNC	ENSMUSG00000031633.5	novel	1925	4	NA	NA	0	514	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3341.33329488395	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCACAAGTTCACAGATCC	NA	False	NA	41	True	NA	NA	NA	46664067	46660492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848_46663969_46664028
ENSMUSG00000031634.14_46428571_46449897_1	chr8	+	1038	9	NIC	ENSMUSG00000031634.14	novel	1640	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	65.648210181238	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAGCTGTGATTTAAAAA	8866	False	NA	6	True	AATAAA	-19	NA	46428570	46449897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ENSMUSG00000031634.14_46428571_46449897_2	chr8	+	1530	12	NNC	ENSMUSG00000031634.14	novel	1640	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	60.0733711169547	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAGCTGTGATTTAAAAA	8866	False	NA	6	True	AATAAA	-19	NA	46428570	46449897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448580_46448700_46449738
ENSMUSG00000031637.14_46449939_46452937_1	chr8	+	726	5	Fusion	ENSMUSG00000031634.14_ENSMUSG00000031637.14	novel	1603	9	NA	NA	1774	2942	multi-exon	FALSE	non_canonical	0	0	junction_1	0	234	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGCGGAGCCTGCTGC	NA	False	NA	NA	False	NA	NA	NA	46449938	46452937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr8_+_46450163_46450650_46450858_46451433_46451526_46452279_46452441_46452895
ENSMUSG00000031637.14_46449939_46452937_2	chr8	+	926	5	Fusion	ENSMUSG00000031634.14_ENSMUSG00000031637.14	novel	1525	9	NA	NA	1774	2942	multi-exon	FALSE	non_canonical	0	0	junction_1	0	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGCGGAGCCTGCTGC	NA	False	NA	NA	False	NA	NA	NA	46449938	46452937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr8_+_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452687
ENSMUSG00000031651.6_43582844_43633311_1	chr8	-	1778	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38788	0	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_5	54.8005660629188	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTATTGCTTTCTG	NA	False	NA	0	True	TATAAA	-19	NA	43633311	43582843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43594003_43594341_43595725_43595759_43633233
ENSMUSG00000031651.6_43582844_43633311_2	chr8	-	1821	9	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38788	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_7	57.3389047680543	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTATTGCTTTCTG	NA	False	NA	0	True	TATAAA	-19	NA	43633311	43582843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43594003_43594341_43595725_43595759_43618053_43618097_43633233
ENSMUSG00000031651.6_43582844_43633311_3	chr8	-	1408	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38788	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	84.5113010194495	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTATTGCTTTCTG	NA	False	NA	0	True	TATAAA	-19	NA	43633311	43582843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43633233
ENSMUSG00000031660.14_89058939_89088642_1	chr8	-	2193	17	FSM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	180	1252	0	476	multi-exon	TRUE	canonical	3	463	junction_12	36.2439650148821	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGCTGGTGTGTCAGCT	NA	False	NA	-5	True	AATAAA	-20	NA	89088642	89058938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ENSMUSG00000031660.14_89058939_89088642_2	chr8	-	2188	17	NNC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	0	476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	131.267602986228	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGCTGGTGTGTCAGCT	NA	False	NA	-5	True	AATAAA	-20	NA	89088642	89058938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081397_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ENSMUSG00000031665.8_89753863_89757735_1	chr8	-	2748	2	ISM	ENSMUSG00000031665.8	ENSMUST00000034090.8	5265	4	13055	0	13055	0	3prime_fragment	FALSE	canonical	3	240	junction_1	0	330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTGTGTTTGTAGAG	NA	False	NA	NA	False	GATAAA	-9	NA	89757735	89753862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_89755447_89756571
ENSMUSG00000031665.8_89753863_89758074_1	chr8	-	3087	2	ISM	ENSMUSG00000031665.8	ENSMUST00000034090.8	5265	4	12716	0	12716	0	3prime_fragment	FALSE	canonical	3	240	junction_1	0	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTGTGTTTGTAGAG	NA	False	NA	NA	False	GATAAA	-9	NA	89758074	89753862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_89755447_89756571
ENSMUSG00000031666.16_91850127_91860651_1	chr8	+	2145	10	NIC	ENSMUSG00000031666.16	novel	4792	22	NA	NA	8370	10179	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	549	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGGACACGCCCTGGACA	NA	False	NA	NA	False	NA	NA	NA	91850126	91860651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
ENSMUSG00000031667.17_91850516_91860651_1	chr8	-	1756	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	4	319	0	-319	multi-exon	FALSE	canonical	3	258	junction_9	63.7020456287233	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAAAGTAATGCTCCT	NA	False	NA	-10	True	AATAAA	-26	NA	91860651	91850515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
ENSMUSG00000031669.11_96360182_96371141_1	chr8	+	1871	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	101	547	0	-547	multi-exon	FALSE	canonical	3	97	junction_2	2	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTTTCTTTAAAGAAAG	NA	False	NA	17	True	AATAAA	-17	NA	96360181	96371141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_96360412_96364437_96364672_96369734
ENSMUSG00000031671.12_96444573_96445638_1	chr8	+	835	3	ISM	ENSMUSG00000031671.12	ENSMUST00000154593.2	774	4	936	-139	936	0	3prime_fragment	FALSE	canonical	3	366	junction_1	31	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAACTTTCTTTAGCAC	NA	False	NA	39	True	AATAAA	-26	NA	96444572	96445638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_96444730_96444820_96444964_96445103
ENSMUSG00000031672.9_96590762_96615020_1	chr8	-	2375	10	FSM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	155	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	94.2456731822753	3560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTGCTTTTCTACT	NA	False	NA	-4	True	AATAAA	-17	NA	96615020	96590761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000031672.9_96590762_96615020_2	chr8	-	2370	10	NNC	ENSMUSG00000031672.9	novel	2530	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	209.049406411469	1587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTGCTTTTCTACT	NA	False	NA	-4	True	AATAAA	-17	NA	96615020	96590761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598961_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000031672.9_96590762_96615020_3	chr8	-	568	4	NNC	ENSMUSG00000031672.9	novel	2530	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	275.952089239338	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTGCTTTTCTACT	NA	False	NA	-4	True	AATAAA	-17	NA	96615020	96590761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_96590868_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000031672.9_96590762_96615020_4	chr8	-	2369	10	NNC	ENSMUSG00000031672.9	novel	2530	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	208.866133512341	1456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTGCTTTTCTACT	NA	False	NA	-4	True	AATAAA	-17	NA	96615020	96590761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597548_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000031672.9_96591431_96615020_1	chr8	-	1706	10	FSM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	155	669	0	254	multi-exon	FALSE	canonical	3	353	junction_1	94.2456731822753	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGGTATCAGGGGCTCC	NA	False	NA	NA	False	NA	NA	NA	96615020	96591430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000031672.9_96595922_96615020_1	chr8	-	1284	8	ISM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	155	5160	0	178	5prime_fragment	FALSE	canonical	3	549	junction_7	40.4772548879652	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGTTCAGTTGAAATAC	NA	False	NA	NA	False	AATAAA	-17	NA	96615020	96595921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000031683.17_79533200_79547769_1	chr8	-	2086	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	0	1706	0	-120	multi-exon	FALSE	canonical	3	636	junction_4	242.43865203387	3048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAACTGTAGTCTCCTCGT	NA	False	NA	-10	True	NA	NA	NA	79547769	79533199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
ENSMUSG00000031683.17_79533200_79547769_2	chr8	-	1987	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	0	120	0	-120	multi-exon	FALSE	canonical	3	383	junction_3	374.138417641861	1941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAACTGTAGTCTCCTCGT	NA	False	NA	-10	True	NA	NA	NA	79547769	79533199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
ENSMUSG00000031683.17_79534666_79547769_1	chr8	-	521	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	0	1586	0	0	multi-exon	FALSE	canonical	3	383	junction_3	374.138417641861	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTATGTCTCAGTCTTT	NA	False	NA	-7	True	NA	NA	NA	79547769	79534665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
ENSMUSG00000031683.17_79534666_79547769_2	chr8	-	620	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	0	3172	0	0	multi-exon	FALSE	canonical	3	636	junction_4	242.43865203387	2535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTATGTCTCAGTCTTT	NA	False	NA	-7	True	NA	NA	NA	79547769	79534665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
ENSMUSG00000031684.12_79235981_79459467_1	chr8	+	2446	12	FSM	ENSMUSG00000031684.12	ENSMUST00000034111.10	3595	12	-16	1165	0	-741	multi-exon	FALSE	canonical	3	98	junction_5	15.4524062690615	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGCTAAAGCAGCATAC	NA	False	NA	NA	False	NA	NA	NA	79235980	79459467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ENSMUSG00000031684.12_79236021_79458417_1	chr8	+	1356	12	FSM	ENSMUSG00000031684.12	ENSMUST00000034111.10	3595	12	24	2215	0	150	multi-exon	FALSE	canonical	3	98	junction_5	15.4524062690615	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGTTTTTGACAAGAGCG	NA	False	NA	NA	False	NA	NA	NA	79236020	79458417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ENSMUSG00000031697.13_86026261_86034699_1	chr8	+	1445	7	FSM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	-159	1	0	0	multi-exon	FALSE	canonical	3	862	junction_2	81.7626986399598	5742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGTATGAGTA	NA	False	NA	8	True	AATAAA	-16	NA	86026260	86034699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_86026622_86027737_86027868_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ENSMUSG00000031697.13_86026552_86034699_1	chr8	+	1148	7	NNC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_6	378.675506058801	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGTATGAGTA	NA	False	NA	8	True	AATAAA	-16	NA	86026551	86034699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_86026622_86027737_86027868_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034220
ENSMUSG00000031697.13_86026552_86034699_2	chr8	+	990	6	NIC	ENSMUSG00000031697.13	novel	1041	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	109	junction_2	378.03089820807	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGTATGAGTA	NA	False	NA	8	True	AATAAA	-16	NA	86026551	86034699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_86026622_86027737_86027868_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ENSMUSG00000031697.13_86026552_86034699_3	chr8	+	1154	7	FSM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	132	1	0	0	multi-exon	FALSE	canonical	3	862	junction_2	81.7626986399598	5059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGTATGAGTA	NA	False	NA	8	True	AATAAA	-16	NA	86026551	86034699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_86026622_86027737_86027868_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ENSMUSG00000031697.13_86026552_86034699_4	chr8	+	1149	7	NNC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	368.735414024142	3629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGTATGAGTA	NA	False	NA	8	True	AATAAA	-16	NA	86026551	86034699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_86026622_86027742_86027868_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ENSMUSG00000031697.13_86026552_86034699_5	chr8	+	860	5	NIC	ENSMUSG00000031697.13	novel	1466	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	431.436264122524	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGTATGAGTA	NA	False	NA	8	True	AATAAA	-16	NA	86026551	86034699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_86026622_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ENSMUSG00000031697.13_86026552_86034699_6	chr8	+	1024	6	FSM	ENSMUSG00000031697.13	ENSMUST00000170141.3	1466	6	234	208	0	0	multi-exon	FALSE	canonical	3	116	junction_1	361.716463545689	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGTATGAGTA	NA	False	NA	8	True	AATAAA	-16	NA	86026551	86034699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_86026622_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ENSMUSG00000031701.7_86265258_86281973_1	chr8	-	1918	9	NNC	ENSMUSG00000031701.7	novel	2919	9	NA	NA	0	-996	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	268.213272182791	2597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTGTGTCACATTTTT	NA	False	NA	-4	True	AATAAA	-17	NA	86281973	86265257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273334_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
ENSMUSG00000031701.7_86265258_86281973_2	chr8	-	1914	9	NNC	ENSMUSG00000031701.7	novel	2919	9	NA	NA	0	-996	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_3	264.525046073146	2595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTGTGTCACATTTTT	NA	False	NA	-4	True	AATAAA	-17	NA	86281973	86265257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_86266037_86266678_86266807_86266936_86267073_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
ENSMUSG00000031703.9_86444207_86567370_1	chr8	-	3126	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	180	0	180	0	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAACGCTGTGGCAAG	NA	False	NA	-21	True	AATAAA	-13	NA	86567370	86444206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ENSMUSG00000031703.9_86445168_86567370_1	chr8	-	2165	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	180	961	180	-961	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCCAGGGCGTTGTT	NA	False	NA	-26	True	AATAAA	-15	NA	86567370	86445167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ENSMUSG00000031703.9_86445335_86567370_1	chr8	-	1998	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	180	1128	180	-1128	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTTAAGCACTTTGT	NA	False	NA	-13	True	AATAAA	-23	NA	86567370	86445334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ENSMUSG00000031708.18_84298329_84321094_1	chr8	-	1141	13	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	1128.13115803182	11237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321094	84298328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299661_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ENSMUSG00000031711.8_83490250_83500774_1	chr8	-	421	6	NNC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	198.198486371617	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGGTACTGAGTT	NA	False	NA	-17	True	AATAAA	-17	NA	83500774	83490249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_83490308_83495977_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
ENSMUSG00000031711.8_83490250_83500774_2	chr8	-	1650	9	NNC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	168.735693838026	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGGTACTGAGTT	NA	False	NA	-17	True	AATAAA	-17	NA	83500774	83490249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497511_83499508_83499641_83500685
ENSMUSG00000031711.8_83490250_83500774_3	chr8	-	1666	9	NNC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	168.735693838026	1921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGGTACTGAGTT	NA	False	NA	-17	True	AATAAA	-17	NA	83500774	83490249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83499482_83499641_83500685
ENSMUSG00000031711.8_83490250_83500774_4	chr8	-	1659	9	NNC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	168.735693838026	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGGTACTGAGTT	NA	False	NA	-17	True	AATAAA	-17	NA	83500774	83490249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497494_83499482_83499641_83500685
ENSMUSG00000031711.8_83490250_83500774_5	chr8	-	1655	10	NNC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	158.57630480133	1803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGGTACTGAGTT	NA	False	NA	-17	True	AATAAA	-17	NA	83500774	83490249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_83491121_83491488_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
ENSMUSG00000031711.8_83490594_83500774_1	chr8	-	1316	10	FSM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	15	344	0	-344	multi-exon	FALSE	canonical	3	422	junction_3	43.069567612422	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAGGAAATATATTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	83500774	83490593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
ENSMUSG00000031714.10_81491069_81585876_1	chr8	-	3958	10	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	21249	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_6	37.5443770345651	697	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGAGCTGTGTTACT	NA	False	NA	-9	True	AATAAA	-15	NA	81585876	81491068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
ENSMUSG00000031714.10_81491069_81585876_2	chr8	-	4048	11	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	21249	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	171.228765106801	673	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGAGCTGTGTTACT	NA	False	NA	-9	True	AATAAA	-15	NA	81585876	81491068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81502789_81502880_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
ENSMUSG00000031714.10_81491725_81585876_1	chr8	-	3302	10	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	21249	-656	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_6	37.5443770345651	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGAGCCTTGCTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	81585876	81491724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
ENSMUSG00000031714.10_81492230_81585876_2	chr8	-	2797	10	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	21249	-1161	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_6	37.5443770345651	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACAGCATGGACTGCTG	NA	False	NA	NA	False	NA	NA	NA	81585876	81492229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
ENSMUSG00000031714.10_81502846_81585876_1	chr8	-	1603	7	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	21249	-11777	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	154.982436280875	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTAGAGCGAACTGATT	NA	False	NA	NA	False	NA	NA	NA	81585876	81502845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_81502880_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
ENSMUSG00000031729.7_110397957_110419879_1	chr8	-	1948	7	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	243.988160004174	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTTGGTCAAATGAG	NA	False	NA	-13	True	AATAAA	-20	NA	110419879	110397956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_110399274_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ENSMUSG00000031729.7_110397957_110419879_2	chr8	-	2287	10	NNC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	201.840482180641	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTTGGTCAAATGAG	NA	False	NA	-13	True	AATAAA	-20	NA	110419879	110397956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_110399266_110402003_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ENSMUSG00000031729.7_110397957_110419879_3	chr8	-	2246	9	NNC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	212.348144270205	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTTGGTCAAATGAG	NA	False	NA	-13	True	AATAAA	-20	NA	110419879	110397956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_110399274_110403385_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ENSMUSG00000031729.7_110397957_110419879_4	chr8	-	2451	11	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	245.924866575139	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTTGGTCAAATGAG	NA	False	NA	-13	True	AATAAA	-20	NA	110419879	110397956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_110399274_110402007_110402057_110402274_110402435_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ENSMUSG00000031730.19_110320109_110335017_1	chr8	-	1801	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	238	0	-19	0	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAGAATATATTGTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	110335017	110320108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ENSMUSG00000031730.19_110320379_110335017_1	chr8	-	1531	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	238	270	-19	0	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAAATCCCATCCCTT	NA	False	NA	-9	True	AATAAA	-13	NA	110335017	110320378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ENSMUSG00000031750.16_111468472_111482615_1	chr8	-	1751	7	NNC	ENSMUSG00000031750.16	novel	1709	7	NA	NA	-13285	0	at_least_one_novel_splicesite	TRUE	canonical	3	22	junction_6	7.54247233265651	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGCATCTCTGATG	NA	False	NA	-23	True	ATTAAA	-16	NA	111482615	111468471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862_111482283_111482403
ENSMUSG00000031753.17_111537124_111573413_1	chr8	+	4277	26	NIC	ENSMUSG00000031753.17	novel	2442	19	NA	NA	-36108	-3492	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTTCGGGTGCCGCGCG	105	False	NA	NA	False	NA	NA	NA	111537123	111573413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ENSMUSG00000031753.17_111537124_111573413_2	chr8	+	4249	26	NNC	ENSMUSG00000031753.17	novel	2442	19	NA	NA	-36108	-3492	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1021	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTTCGGGTGCCGCGCG	105	False	NA	NA	False	NA	NA	NA	111537123	111573413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573334
ENSMUSG00000031753.17_111537326_111573413_1	chr8	+	4075	26	NIC	ENSMUSG00000031753.17	novel	2442	19	NA	NA	-35906	-3492	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTTCGGGTGCCGCGCG	307	False	NA	NA	False	NA	NA	NA	111537325	111573413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ENSMUSG00000031753.17_111537326_111573413_2	chr8	+	4047	26	NNC	ENSMUSG00000031753.17	novel	2442	19	NA	NA	-35906	-3492	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTTCGGGTGCCGCGCG	307	False	NA	NA	False	NA	NA	NA	111537325	111573413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573334
ENSMUSG00000031754.11_94746033_94763642_1	chr8	-	1078	7	NNC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	862.075547733492	9743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGAGGATCCTTTTTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	94763642	94746032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_94746333_94749402_94749518_94751175_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ENSMUSG00000031754.11_94746076_94763642_1	chr8	-	1041	7	FSM	ENSMUSG00000031754.11	ENSMUST00000034204.11	5010	7	17	3952	-8	0	multi-exon	FALSE	canonical	3	2190	junction_4	118.898649651242	9479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTTTTTTAAGTTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	94763642	94746075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ENSMUSG00000031755.7_94794582_94825105_1	chr8	-	2613	17	FSM	ENSMUSG00000031755.7	ENSMUST00000034206.6	3064	17	451	0	451	0	multi-exon	FALSE	canonical	1	2	junction_15	7.54569413639329	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGTTGTTTATAAATT	NA	False	NA	-3	True	AATAAA	-15	NA	94825105	94794581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_94795011_94796589_94796739_94800919_94801033_94801750_94801889_94803579_94803712_94806110_94806241_94807395_94807568_94807652_94807798_94808625_94808766_94808983_94809120_94813283_94813371_94813458_94813564_94814004_94814083_94815730_94815794_94816389_94816516_94819022_94819251_94824863
ENSMUSG00000031756.6_117648469_117662175_1	chr8	+	1230	9	NNC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	0	2323	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	92.9620218153629	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTTACTTTTATTGTT	NA	False	NA	NA	False	AAAAAG	-6	NA	117648468	117662175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117661756
ENSMUSG00000031758.11_117299595_117399915_1	chr8	-	3817	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59815	1544	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_6	23.3571307218065	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATTAGCTTCTGATCAA	NA	False	NA	NA	False	NA	NA	NA	117399915	117299594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117399859
ENSMUSG00000031758.11_117300583_117399915_1	chr8	-	2829	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59815	556	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_6	23.3571307218065	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATCTTTAATTTTTGT	NA	False	NA	NA	False	AAAACA	-22	NA	117399915	117300582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117399859
ENSMUSG00000031758.11_117301139_117399915_1	chr8	-	2273	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59815	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_6	23.3571307218065	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTAGGAAATTTTTTTC	NA	False	NA	65	True	NA	NA	NA	117399915	117301138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117399859
ENSMUSG00000031762.8_94899488_94900196_1	chr8	+	315	3	FSM	ENSMUSG00000031762.8	ENSMUST00000034214.8	511	3	196	0	0	0	multi-exon	FALSE	canonical	3	13494	junction_2	132	5253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCTGTGCATTGGT	NA	False	NA	37	True	AATAAA	-23	NA	94899487	94900196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_94899504_94899754_94899821_94899963
ENSMUSG00000031765.9_94905869_94906955_1	chr8	+	390	3	FSM	ENSMUSG00000031765.9	ENSMUST00000034215.8	549	3	159	0	0	0	multi-exon	FALSE	canonical	3	14682	junction_2	74.5	64425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTTGGTGTGG	NA	False	NA	29	True	AATAAA	-18	NA	94905868	94906955	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_94905967_94906450_94906517_94906729
ENSMUSG00000031767.14_114860358_114879045_1	chr8	+	1048	4	FSM	ENSMUSG00000031767.14	ENSMUST00000073521.12	3543	4	61	2434	0	-1	multi-exon	FALSE	canonical	2	2	junction_3	2.05480466765633	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCTTGCAATATTCATC	NA	False	NA	NA	False	NA	NA	NA	114860357	114879045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_114860441_114863077_114863232_114874634_114874794_114878393
ENSMUSG00000031770.17_95113066_95121987_1	chr8	+	1897	9	NNC	ENSMUSG00000031770.17	novel	1952	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	203.578608895925	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCCATTGTCCT	NA	False	NA	29	True	AATAAA	-22	NA	95113065	95121987	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_95113367_95115983_95116062_95116151_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218_95121917_95121950
ENSMUSG00000031770.17_95113066_95121987_2	chr8	+	1926	8	NNC	ENSMUSG00000031770.17	novel	1952	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_5	205.781040756173	991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCCATTGTCCT	NA	False	NA	29	True	AATAAA	-22	NA	95113065	95121987	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_95113367_95115983_95116062_95116151_95116224_95117345_95117477_95118359_95118483_95118806_95119153_95120423_95120530_95121218
ENSMUSG00000031770.17_95113123_95121987_1	chr8	+	1768	7	NIC	ENSMUSG00000031770.17	novel	1873	8	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	231.487700657196	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCCATTGTCCT	NA	False	NA	29	True	AATAAA	-22	NA	95113122	95121987	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_95113367_95115983_95116062_95116151_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95121218
ENSMUSG00000031774.9_95301568_95328331_1	chr8	-	1777	8	FSM	ENSMUSG00000031774.9	ENSMUST00000034226.8	2873	8	294	802	-2	717	multi-exon	FALSE	canonical	0	0	junction_3	171.915855070118	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAGAAGCAAACTTAC	3884	False	NA	-4	True	AATAAA	-23	NA	95328331	95301567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ENSMUSG00000031774.9_95301568_95328331_2	chr8	-	1680	7	NIC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	-2	717	intron_retention	FALSE	canonical	0	0	junction_3	218.907451271587	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAGAAGCAAACTTAC	3884	False	NA	-4	True	AATAAA	-23	NA	95328331	95301567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95328124
ENSMUSG00000031774.9_95301568_95328331_3	chr8	-	1639	8	NIC	ENSMUSG00000031774.9	novel	828	9	NA	NA	-2	717	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	220.053796762037	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAGAAGCAAACTTAC	3884	False	NA	-4	True	AATAAA	-23	NA	95328331	95301567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328262
ENSMUSG00000031774.9_95301568_95328331_4	chr8	-	1770	8	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	-2	717	intron_retention	FALSE	non_canonical	0	0	junction_3	171.915855070118	878	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAGAAGCAAACTTAC	3884	False	NA	-4	True	AATAAA	-23	NA	95328331	95301567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_95302486_95306027_95306093_95309511_95309643_95313958_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ENSMUSG00000031774.9_95301568_95328331_5	chr8	-	1680	9	NIC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	-2	717	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	197.424036023986	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAGAAGCAAACTTAC	3884	False	NA	-4	True	AATAAA	-23	NA	95328331	95301567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124_95328213_95328309
ENSMUSG00000031774.9_95302125_95328331_1	chr8	-	1220	8	FSM	ENSMUSG00000031774.9	ENSMUST00000034226.8	2873	8	294	1359	-2	160	multi-exon	FALSE	canonical	0	0	junction_3	171.915855070118	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGCTCAAACTCGGCT	3884	False	NA	-16	True	NA	NA	NA	95328331	95302124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ENSMUSG00000031776.18_95393351_95401053_1	chr8	+	1940	6	FSM	ENSMUSG00000031776.18	ENSMUST00000034228.16	2063	6	123	0	0	0	multi-exon	FALSE	canonical	3	229	junction_5	11.4612390255155	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGATGTGCATTGTCC	NA	False	NA	12	True	AGTAAA	-25	NA	95393350	95401053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
ENSMUSG00000031781.15_95549189_95559330_1	chr8	-	1489	8	NNC	ENSMUSG00000031781.15	novel	1807	9	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	613.564027894832	3143	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTACTGTGAGTGTG	NA	False	NA	-14	True	ATTAAA	-19	NA	95559330	95549188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_95549836_95550288_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142
ENSMUSG00000031783.11_95584146_95590539_1	chr8	+	1181	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	68	331	0	170	multi-exon	FALSE	canonical	3	1933	junction_5	86.4056566435323	7343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCGTCATCGTGCCA	NA	False	NA	27	True	AATAAA	-18	NA	95584145	95590539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ENSMUSG00000031783.11_95584260_95590539_1	chr8	+	1067	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	182	331	0	170	multi-exon	FALSE	canonical	3	1933	junction_5	86.4056566435323	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCGTCATCGTGCCA	NA	False	NA	27	True	AATAAA	-18	NA	95584259	95590539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ENSMUSG00000031785.17_95703931_95740149_1	chr8	+	2724	14	FSM	ENSMUSG00000031785.17	ENSMUST00000179619.9	3616	14	196	696	194	-675	multi-exon	FALSE	canonical	3	57	junction_6	9.58857801774418	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTGTTCCCCTAACC	875	False	NA	NA	False	NA	NA	NA	95703930	95740149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_95704046_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
ENSMUSG00000031785.17_95703931_95740829_1	chr8	+	3404	14	FSM	ENSMUSG00000031785.17	ENSMUST00000179619.9	3616	14	196	16	194	2	multi-exon	FALSE	canonical	3	57	junction_6	9.58857801774418	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTGCCCGTCTCAGTT	875	False	NA	30	True	AATAAA	-43	NA	95703930	95740829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_95704046_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
ENSMUSG00000031785.17_95703931_95740829_2	chr8	+	971	4	NNC	ENSMUSG00000031785.17	novel	3616	14	NA	NA	194	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	42.2084772949174	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTGCCCGTCTCAGTT	875	False	NA	30	True	AATAAA	-43	NA	95703930	95740829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_95704046_95729066_95729142_95729878_95729986_95740155
ENSMUSG00000031787.9_95807814_95825687_1	chr8	+	2625	20	FSM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	0	1152	0	-1152	multi-exon	FALSE	canonical	3	123	junction_1	16.4357221924964	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCTTATGAGAGGAATAT	809	False	NA	14	True	ATTAAA	-18	NA	95807813	95825687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
ENSMUSG00000031792.16_96058931_96060454_1	chr8	+	622	2	ISM	ENSMUSG00000031792.16	ENSMUST00000145060.2	871	5	-22	10455	0	-4832	5prime_fragment	FALSE	canonical	3	234	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCACCATCCAGAGTGCT	NA	False	NA	NA	False	NA	NA	NA	96058930	96060454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_96059094_96059995
ENSMUSG00000031792.16_96058931_96074137_1	chr8	+	1720	7	NNC	ENSMUSG00000031792.16	novel	1758	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	68.6601938696813	616	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGTCTTATTTTAAAC	NA	False	NA	14	True	AATAAA	-15	NA	96058930	96074137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_96059094_96059995_96060163_96065261_96065446_96069770_96069804_96070584_96070691_96071916_96072001_96073154
ENSMUSG00000031792.16_96058931_96074137_2	chr8	+	1722	7	NIC	ENSMUSG00000031792.16	novel	1758	7	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	78.3212756677406	613	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGTCTTATTTTAAAC	NA	False	NA	14	True	AATAAA	-15	NA	96058930	96074137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_96059075_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
ENSMUSG00000031796.8_96146877_96161430_1	chr8	-	2039	5	NIC	ENSMUSG00000031796.8	novel	1295	6	NA	NA	-6	0	intron_retention	FALSE	canonical	3	468	junction_1	23.0054341406547	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	False	NA	-6	True	AATAAA	-24	NA	96161430	96146876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_96147298_96147763_96148875_96149410_96149523_96151244_96151325_96161115
ENSMUSG00000031796.8_96146877_96161430_2	chr8	-	1148	5	FSM	ENSMUSG00000031796.8	ENSMUST00000212684.2	1023	5	28	-153	-6	0	multi-exon	FALSE	canonical	3	46	junction_4	193.603977231874	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	False	NA	-6	True	AATAAA	-24	NA	96161430	96146876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96161115
ENSMUSG00000031812.17_122317100_122323751_1	chr8	+	784	4	FSM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	0	1748	0	0	multi-exon	FALSE	canonical	3	2350	junction_2	129.422649571944	5384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTGCCAATAAAAAGATCAA	9845	False	NA	-7	True	AATAAA	-19	NA	122317099	122323751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_122317304_122320228_122320285_122322724_122322832_122323334
ENSMUSG00000031812.17_122317216_122323751_1	chr8	+	668	4	FSM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	116	1748	0	0	multi-exon	FALSE	canonical	3	2350	junction_2	129.422649571944	5294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTGCCAATAAAAAGATCAA	9961	False	NA	-7	True	AATAAA	-19	NA	122317215	122323751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_122317304_122320228_122320285_122322724_122322832_122323334
ENSMUSG00000031812.17_122317216_122324785_1	chr8	+	1702	4	FSM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	116	714	0	0	multi-exon	FALSE	canonical	3	2350	junction_2	129.422649571944	7214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGTGATGTCTCATTG	9961	False	NA	16	True	AATAAA	-16	NA	122317215	122324785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_122317304_122320228_122320285_122322724_122322832_122323334
ENSMUSG00000031813.9_71995566_72000670_1	chr8	+	1065	9	NNC	ENSMUSG00000031813.9	novel	1062	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	136.141413151913	1648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGAGTGTATTGTTTT	NA	False	NA	11	True	AGTAAA	-18	NA	71995565	72000670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867_71997995_71998190_71998311_71998398_71998501_71999616_71999679_72000221_72000279_72000405
ENSMUSG00000031813.9_71995566_72000670_2	chr8	+	1052	9	NNC	ENSMUSG00000031813.9	novel	1062	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	131.252559498853	1608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGAGTGTATTGTTTT	NA	False	NA	11	True	AGTAAA	-18	NA	71995565	72000670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_71995702_71995794_71995876_71996030_71996128_71997867_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
ENSMUSG00000031816.16_121824294_121835052_2	chr8	-	1504	9	NIC	ENSMUSG00000031816.16	novel	1060	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_6	14.260412862186	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTATGTTTGTGTA	NA	False	NA	-9	True	NA	NA	NA	121835052	121824293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_121824665_121825446_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
ENSMUSG00000031816.16_121830591_121835052_1	chr8	-	682	5	NIC	ENSMUSG00000031816.16	novel	488	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	32.1510108705776	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCTGCGGCTTACAAAAA	NA	False	NA	NA	False	AATAAA	-30	NA	121835052	121830590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_121830915_121831130_121831245_121832312_121832427_121833608_121833713_121835026
ENSMUSG00000031816.16_121830591_121835052_2	chr8	-	687	5	NIC	ENSMUSG00000031816.16	novel	488	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	27.9776696670756	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCTGCGGCTTACAAAAA	NA	False	NA	NA	False	AATAAA	-30	NA	121835052	121830590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_121830920_121831130_121831245_121832312_121832427_121833608_121833713_121835026
ENSMUSG00000031819.14_121395047_121400946_1	chr8	-	642	5	NNC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	-5634	-7661	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	8640	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCTCGCGACCGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	121400946	121395046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_121395095_121396047_121396105_121399463_121399632_121399959_121400092_121400709
ENSMUSG00000031819.14_121395047_121400946_2	chr8	-	645	5	NNC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	-5634	-7661	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	15228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCTCGCGACCGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	121400946	121395046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_121395095_121396047_121396122_121399477_121399632_121399959_121400092_121400709
ENSMUSG00000031819.14_121395047_121400946_3	chr8	-	662	5	NNC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	-5634	-7661	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	22423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCTCGCGACCGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	121400946	121395046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_121395095_121396047_121396105_121399443_121399632_121399959_121400092_121400709
ENSMUSG00000031819.14_121395047_121400946_4	chr8	-	629	4	NNC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	-5634	-7661	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	860	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCTCGCGACCGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	121400946	121395046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_121395095_121399419_121399632_121399959_121400092_121400709
ENSMUSG00000031819.14_121395047_121400946_5	chr8	-	644	5	NNC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	-5634	-7661	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1958	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCTCGCGACCGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	121400946	121395046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_121395091_121396047_121396122_121399467_121399625_121399959_121400092_121400709
ENSMUSG00000031819.14_121395047_121400946_6	chr8	-	619	4	NNC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	-5634	-7661	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	817	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCTCGCGACCGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	121400946	121395046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_121395129_121399463_121399632_121399959_121400092_121400709
ENSMUSG00000031819.14_121395047_121400946_7	chr8	-	651	5	NIC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	-5634	-7661	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	10334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCTCGCGACCGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	121400946	121395046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_121395091_121396047_121396122_121399467_121399632_121399959_121400092_121400709
ENSMUSG00000031819.14_121395047_121400946_8	chr8	-	644	5	NNC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	-5634	-7661	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	23454	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCTCGCGACCGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	121400946	121395046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_121395095_121396062_121396122_121399463_121399632_121399959_121400092_121400709
ENSMUSG00000031821.12_121308006_121315795_1	chr8	-	1018	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	248	2634	-22	277	multi-exon	FALSE	canonical	3	1091	junction_3	31.7125763696361	3788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACTTAGAACGGGTTTA	NA	False	NA	88	True	AATACA	-15	NA	121315795	121308005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
ENSMUSG00000031821.12_121308119_121315795_1	chr8	-	905	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	248	2747	-22	164	multi-exon	FALSE	canonical	3	1091	junction_3	31.7125763696361	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATTTAGGAAGATTTTA	NA	False	NA	-25	True	AAAAAG	-17	NA	121315795	121308118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
ENSMUSG00000031822.21_121308006_121315795_1	chr8	+	1013	5	NNC	ENSMUSG00000031822.21	novel	7127	16	NA	NA	9938	7666	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3589	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAGAGGCAGCGCCTCA	NA	False	NA	NA	False	NA	NA	NA	121308005	121315795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315669
ENSMUSG00000031822.21_121308006_121315795_2	chr8	+	1113	6	NIC	ENSMUSG00000031822.21	novel	7127	16	NA	NA	9938	7666	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	559	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAGAGGCAGCGCCTCA	NA	False	NA	NA	False	NA	NA	NA	121308005	121315795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_121308551_121308820_121308948_121312831_121312932_121314194_121314290_121315463_121315579_121315664
ENSMUSG00000031822.21_121308006_121315795_3	chr8	+	1104	4	NIC	ENSMUSG00000031822.21	novel	7127	16	NA	NA	9938	7666	intron_retention	FALSE	non_canonical	0	0	junction_1	0	3143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAGAGGCAGCGCCTCA	NA	False	NA	NA	False	NA	NA	NA	121308005	121315795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_121308551_121308820_121308948_121312831_121312932_121315463
ENSMUSG00000031826.21_120637572_120683608_1	chr8	+	2564	14	FSM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	19	691	0	0	multi-exon	FALSE	canonical	3	740	junction_3	231.479471146212	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCGTGGGCTTGGATGGA	8846	False	NA	NA	False	NA	NA	NA	120637571	120683608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ENSMUSG00000031834.16_71220820_71222032_1	chr8	-	934	3	FSM	ENSMUSG00000031834.16	ENSMUST00000146707.2	746	3	276	-464	0	0	multi-exon	FALSE	canonical	3	190	junction_1	3.5	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCTTTGGGGACTGG	NA	False	NA	-8	True	NA	NA	NA	71222032	71220819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71221542_71221705_71221877_71221991
ENSMUSG00000031840.15_71211295_71213592_1	chr8	+	1021	5	NNC	ENSMUSG00000031840.15	novel	1442	5	NA	NA	2191	2269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCCGCGCCAATCACATG	NA	False	NA	NA	False	NA	NA	NA	71211294	71213592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_71211671_71211754_71211884_71212036_71212155_71213013_71213185_71213365
ENSMUSG00000031843.3_118518384_118528682_1	chr8	-	1076	5	NNC	ENSMUSG00000031843.3	novel	1068	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_4	285.949624059903	2634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTTGAAGTAATTTTAG	NA	False	NA	-12	True	AATAAA	-22	NA	118528682	118518383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782_118525896_118528582
ENSMUSG00000031848.16_71126029_71131402_1	chr8	+	787	4	NNC	ENSMUSG00000031848.16	novel	925	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1636.13616656914	2865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTTCTTCTGCCTA	NA	False	NA	20	True	AATAAA	-20	NA	71126028	71131402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_71126108_71130392_71130527_71130603_71130785_71131009
ENSMUSG00000031848.16_71126029_71131402_2	chr8	+	794	5	FSM	ENSMUSG00000031848.16	ENSMUST00000034311.15	925	5	131	0	0	0	multi-exon	FALSE	canonical	3	2963	junction_1	310.191070148707	3285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTTCTTCTGCCTA	NA	False	NA	20	True	AATAAA	-20	NA	71126028	71131402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71126108_71129204_71129247_71130427_71130527_71130603_71130785_71131009
ENSMUSG00000031851.15_126460972_126474736_1	chr8	+	887	5	FSM	ENSMUSG00000031851.15	ENSMUST00000034313.13	1155	5	30	238	0	0	multi-exon	FALSE	canonical	3	50	junction_2	22.4388056723169	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTTGGGGCTGAGGA	NA	False	NA	-83	True	NA	NA	NA	126460971	126474736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126471974_126472185_126474436
ENSMUSG00000031851.15_126460972_126474851_2	chr8	+	1002	5	FSM	ENSMUSG00000031851.15	ENSMUST00000034313.13	1155	5	30	123	0	78	multi-exon	FALSE	canonical	3	50	junction_2	22.4388056723169	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGGTTCTCTTCAATTA	NA	False	NA	32	True	NA	NA	NA	126460971	126474851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126471974_126472185_126474436
ENSMUSG00000031860.18_70285310_70324942_1	chr8	+	671	4	NIC	ENSMUSG00000031860.18	novel	823	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	13.4246870437348	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGTTTTCAATACAG	2242	False	NA	5	True	ATTAAA	-18	NA	70285309	70324942	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_70285502_70311729_70311804_70323227_70323335_70324644
ENSMUSG00000031861.17_70275234_70280774_1	chr8	+	2704	3	FSM	ENSMUSG00000031861.17	ENSMUST00000034325.6	5837	3	155	2978	0	-2977	multi-exon	FALSE	canonical	3	18	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGGAAAACGTCTCTTTC	489	False	NA	NA	False	ATTAAA	-16	NA	70275233	70280774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70275362_70276203_70276946_70278940
ENSMUSG00000031864.17_69246626_69280313_1	chr8	+	2485	18	FSM	ENSMUSG00000031864.17	ENSMUST00000110242.8	4250	18	18	1747	0	160	multi-exon	FALSE	canonical	3	21	junction_16	214.082317705889	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	30	True	AATAAA	-32	NA	69246625	69280313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69276841_69276920_69279928
ENSMUSG00000031864.17_69246626_69280313_2	chr8	+	2407	17	FSM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	45	1749	0	160	multi-exon	FALSE	canonical	3	438	junction_4	79.6960779696843	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	30	True	AATAAA	-32	NA	69246625	69280313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ENSMUSG00000031865.17_83142933_83177099_1	chr6	+	473	4	NNC	ENSMUSG00000031865.17	novel	4163	32	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	204.335236532735	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	524	False	NA	NA	False	ATTAAA	-16	NA	83142932	83177099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_83142977_83159505_83159752_83160040_83160107_83176982
ENSMUSG00000031875.8_105067348_105074304_1	chr8	+	1472	6	NNC	ENSMUSG00000031875.8	novel	1616	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.7784663386528	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGAGTGCGCCTGACT	NA	False	NA	13	True	ATTAAA	-15	NA	105067347	105074304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363_105073750_105073771
ENSMUSG00000031878.19_105237660_105261247_1	chr8	-	1779	20	NNC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	176.386490145411	2116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTGTTGTCTGGAA	3355	False	NA	NA	False	AATAAA	-19	NA	105261247	105237659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244572_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ENSMUSG00000031878.19_105237660_105261247_3	chr8	-	1780	20	NNC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	175.201933355553	2216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTGTTGTCTGGAA	3355	False	NA	NA	False	AATAAA	-19	NA	105261247	105237659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251071_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ENSMUSG00000031878.19_105237660_105261247_4	chr8	-	1755	19	NIC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_16	180.03728180437	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTGTTGTCTGGAA	3355	False	NA	NA	False	AATAAA	-19	NA	105261247	105237659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105256687_105256749_105257024_105257129_105261143
ENSMUSG00000031879.15_105366480_105368350_1	chr8	-	643	4	NNC	ENSMUSG00000031879.15	novel	807	4	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	367.695526217005	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCAGTATGCCTTAGCG	NA	False	NA	-10	True	AATAAA	-18	NA	105368350	105366479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_105366719_105367574_105367726_105367942_105368020_105368174
ENSMUSG00000031879.15_105366480_105368350_2	chr8	-	694	5	NNC	ENSMUSG00000031879.15	novel	918	5	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	389.073579159521	2838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCAGTATGCCTTAGCG	NA	False	NA	-10	True	AATAAA	-18	NA	105368350	105366479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_105366719_105367121_105367198_105367599_105367726_105367942_105368020_105368174
ENSMUSG00000031879.15_105366480_105368350_3	chr8	-	658	5	NNC	ENSMUSG00000031879.15	novel	918	5	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	327.680484618782	3139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCAGTATGCCTTAGCG	NA	False	NA	-10	True	AATAAA	-18	NA	105368350	105366479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_105366719_105367151_105367198_105367599_105367726_105367942_105368014_105368174
ENSMUSG00000031885.15_105897577_105944036_1	chr8	+	2058	6	FSM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	256	577	0	-577	multi-exon	FALSE	canonical	3	129	junction_5	26.6578318698277	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTGCATGATAAGGATTG	4017	False	NA	33	True	AATAAA	-22	NA	105897576	105944036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
ENSMUSG00000031885.15_105897577_105944621_1	chr8	+	2643	6	FSM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	256	-8	0	0	multi-exon	FALSE	canonical	3	129	junction_5	26.6578318698277	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	4017	False	NA	82	True	ATTAAA	-22	NA	105897576	105944621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
ENSMUSG00000031885.15_105897577_105944621_2	chr8	+	2612	6	FSM	ENSMUSG00000031885.15	ENSMUST00000052209.9	2883	6	271	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	43.0748186299142	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	4017	False	NA	82	True	ATTAAA	-22	NA	105897576	105944621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
ENSMUSG00000031887.14_105985202_105991213_1	chr8	-	1377	5	FSM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	28	284	0	-284	multi-exon	FALSE	canonical	3	50	junction_4	9.66953980290686	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGGAGATGCTGAGGTC	533	False	NA	-7	True	AATAAA	-19	NA	105991213	105985201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153_105987313_105991192
ENSMUSG00000031889.10_105951838_105979389_1	chr8	+	2559	16	FSM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	61	296	0	1	multi-exon	FALSE	canonical	3	239	junction_9	14.7126551724093	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGCCTCATCTTGTAT	NA	False	NA	NA	False	NA	NA	NA	105951837	105979389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ENSMUSG00000031893.8_106571309_106578640_1	chr8	+	1825	14	NIC	ENSMUSG00000031893.8	novel	1993	14	NA	NA	16925	7328	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	898	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAAGCAGCAGCGAGCAC	NA	False	NA	NA	False	NA	NA	NA	106571308	106578640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_106571628_106571705_106571811_106571891_106572069_106572796_106572854_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
ENSMUSG00000031893.8_106571309_106578640_2	chr8	+	1733	12	NIC	ENSMUSG00000031893.8	novel	1993	14	NA	NA	16925	7328	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAAGCAGCAGCGAGCAC	NA	False	NA	NA	False	NA	NA	NA	106571308	106578640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576402_106578502
ENSMUSG00000031897.10_106662368_106664724_1	chr8	-	962	8	FSM	ENSMUSG00000031897.10	ENSMUST00000034369.10	1311	8	352	-3	0	0	multi-exon	FALSE	canonical	1	3	junction_7	110.839468399582	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACAGAAGGCTGTGTCT	NA	False	NA	-8	True	AATAAA	-19	NA	106664724	106662367	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497_106663614_106663872_106664014_106664125_106664224_106664310_106664399_106664586
ENSMUSG00000031903.8_106877138_106891347_1	chr8	+	2599	6	FSM	ENSMUSG00000031903.8	ENSMUST00000034377.8	2706	6	107	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	8.49941174435031	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTCCTGCTCTGA	6304	False	NA	14	True	AATAAA	-20	NA	106877137	106891347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106877246_106881499_106881657_106886794_106886914_106887212_106887312_106887715_106887941_106889456
ENSMUSG00000031906.10_106937655_106979426_1	chr8	-	3385	18	NIC	ENSMUSG00000031906.10	novel	5148	9	NA	NA	28184	41525	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2965	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGGGCGTCGAGGCGTA	NA	False	NA	NA	False	NA	NA	NA	106979426	106937654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ENSMUSG00000031913.10_107757854_107772097_1	chr8	+	1888	11	FSM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	0	290	0	-290	multi-exon	FALSE	canonical	3	173	junction_10	19.6532440070335	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAAGGAGTGGGAGCTGC	NA	False	NA	11	True	AATAAA	-20	NA	107757853	107772097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ENSMUSG00000031916.18_107775341_107783321_1	chr8	-	2056	5	FSM	ENSMUSG00000031916.18	ENSMUST00000095517.12	4476	5	0	2420	0	-2414	multi-exon	FALSE	canonical	3	128	junction_4	10.356157588604	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTCGCCTGCTGTTCCC	NA	False	NA	-6	True	AATAAA	-14	NA	107783321	107775340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
ENSMUSG00000031917.13_107783538_107785437_1	chr8	+	881	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	29	2126	0	139	multi-exon	FALSE	canonical	3	714	junction_4	51.2688989544344	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGCGTCGTCTTTGT	NA	False	NA	7	True	AGTAAA	-17	NA	107783537	107785437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
ENSMUSG00000031917.13_107783538_107785662_1	chr8	+	1107	5	NNC	ENSMUSG00000031917.13	novel	3036	5	NA	NA	0	364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	346.440831889083	4083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTTATTTCATATGTG	NA	False	NA	21	True	AATAAA	-15	NA	107783537	107785662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_107783623_107783724_107783817_107783908_107784044_107784678_107784820_107785008
ENSMUSG00000031917.13_107783538_107785662_2	chr8	+	1106	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	29	1901	0	364	multi-exon	FALSE	canonical	3	714	junction_4	51.2688989544344	4334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTTATTTCATATGTG	NA	False	NA	21	True	AATAAA	-15	NA	107783537	107785662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
ENSMUSG00000031917.13_107783538_107785662_3	chr8	+	1199	4	NIC	ENSMUSG00000031917.13	novel	3036	5	NA	NA	0	364	intron_retention	FALSE	canonical	3	714	junction_3	58.9594964549581	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTTATTTCATATGTG	NA	False	NA	21	True	AATAAA	-15	NA	107783537	107785662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_107783623_107783724_107784044_107784678_107784820_107785008
ENSMUSG00000031917.13_107783538_107787563_1	chr8	+	1915	6	NNC	ENSMUSG00000031917.13	novel	3036	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	320.893377931051	4720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTCCGTATCAACTCT	NA	False	NA	19	True	ATTAAA	-20	NA	107783537	107787563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008_107785997_107787088
ENSMUSG00000031918.17_13660615_13717777_2	chr9	+	2879	15	FSM	ENSMUSG00000031918.17	ENSMUST00000034396.14	3788	15	909	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	44.4939803312121	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCCACAGTTGTCTA	NA	False	NA	27	True	ATTAAA	-16	NA	13660614	13717777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031922.13_13719091_13738376_1	chr9	-	2417	10	FSM	ENSMUSG00000031922.13	ENSMUST00000147115.8	2262	10	-125	-30	27	0	multi-exon	FALSE	canonical	3	58	junction_3	63.5314639653475	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGCTAACAAAGGCTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	13738376	13719090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ENSMUSG00000031924.5_107877272_107910445_1	chr8	+	658	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	0	3658	0	-2177	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTGTACGACCAGAGT	NA	False	NA	9	True	NA	NA	NA	107877271	107910445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ENSMUSG00000031924.5_107877272_107910733_1	chr8	+	946	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	0	3370	0	-1889	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	2141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTTGTCATTCATCA	NA	False	NA	38	True	AGTAAA	-20	NA	107877271	107910733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ENSMUSG00000031924.5_107877272_107910733_2	chr8	+	935	4	NNC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	0	-1889	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	681.425140585686	1984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTTGTCATTCATCA	NA	False	NA	38	True	AGTAAA	-20	NA	107877271	107910733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_107877506_107896442_107896572_107897022_107897071_107910209
ENSMUSG00000031924.5_107877272_107912622_1	chr8	+	2835	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	0	1481	0	0	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	2419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCGTTTTTTCTATTT	NA	False	NA	55	True	AGTAAA	-11	NA	107877271	107912622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ENSMUSG00000031928.16_14695972_14745260_1	chr9	+	2582	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	22	682	0	-682	multi-exon	FALSE	canonical	3	154	junction_1	46.9081733954962	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCGTTGTTCATTTCT	NA	False	NA	17	True	NA	NA	NA	14695971	14745260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ENSMUSG00000031930.12_108163032_108283845_1	chr8	+	2897	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	35	1382	0	0	multi-exon	FALSE	canonical	3	576	junction_9	55.7196601685668	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTGTTGCAAAGCCAGA	NA	False	NA	11	True	AATAAA	-22	NA	108163031	108283845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ENSMUSG00000031931.5_14691083_14695822_1	chr9	-	2180	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216372.2	2679	3	330	169	0	0	multi-exon	FALSE	canonical	3	72	junction_2	58.5	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCAGTGTTTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	14695822	14691082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_14692908_14693910_14694259_14695815
ENSMUSG00000031931.5_14695998_14745260_1	chr9	-	2606	20	NIC	ENSMUSG00000031931.5	novel	2679	3	NA	NA	-49108	-1836	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTAGGCGCGGGAGAGC	6741	False	NA	NA	False	AAGAAA	-17	NA	14745260	14695997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ENSMUSG00000031938.16_15217556_15223401_1	chr9	-	1103	7	NIC	ENSMUSG00000031938.16	novel	2756	9	NA	NA	-5657	-3626	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCGGCGCCCAGCAGCC	NA	False	NA	NA	False	NA	NA	NA	15223401	15217555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223204
ENSMUSG00000031939.17_15217556_15223094_1	chr9	+	1127	7	NIC	ENSMUSG00000031939.17	novel	1005	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	217.881275010038	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTGCTTGATTTCAGA	9118	False	NA	NA	False	AATAAA	-17	NA	15217555	15223094	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
ENSMUSG00000031939.17_15217556_15223401_1	chr9	+	1316	6	FSM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	-4	-307	0	1	multi-exon	FALSE	canonical	3	288	junction_1	106.167791726116	1722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAAGTGCTTAGCCC	9118	False	NA	6	True	AATAAA	-17	NA	15217555	15223401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
ENSMUSG00000031939.17_15217556_15223401_2	chr9	+	1312	8	NIC	ENSMUSG00000031939.17	novel	2818	9	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	238.474231697417	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAAGTGCTTAGCCC	9118	False	NA	6	True	AATAAA	-17	NA	15217555	15223401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223113
ENSMUSG00000031939.17_15217556_15223401_3	chr9	+	1434	7	NIC	ENSMUSG00000031939.17	novel	2818	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	69	junction_1	217.881275010038	1726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAAGTGCTTAGCCC	9118	False	NA	6	True	AATAAA	-17	NA	15217555	15223401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
ENSMUSG00000031939.17_15217556_15223401_4	chr9	+	1194	7	NIC	ENSMUSG00000031939.17	novel	2818	9	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_6	198.555407884046	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAAGTGCTTAGCCC	9118	False	NA	6	True	AATAAA	-17	NA	15217555	15223401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223113
ENSMUSG00000031939.17_15217556_15223401_5	chr9	+	1221	8	NIC	ENSMUSG00000031939.17	novel	1148	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	233.748163803767	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAAGTGCTTAGCCC	9118	False	NA	6	True	AATAAA	-17	NA	15217555	15223401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223204
ENSMUSG00000031939.17_15217556_15225234_1	chr9	+	2071	7	ISM	ENSMUSG00000031939.17	ENSMUST00000213763.2	1216	12	0	3032	0	-463	5prime_fragment	FALSE	canonical	3	229	junction_6	138.37077806467	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAAAACTGATGTGTTAA	9118	False	NA	NA	False	NA	NA	NA	15217555	15225234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069
ENSMUSG00000031939.17_15217556_15228274_1	chr9	+	1260	12	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	173.277639918911	1241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	9118	False	NA	7	True	NA	NA	NA	15217555	15228274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226773_15228184
ENSMUSG00000031939.17_15217556_15228274_2	chr9	+	1161	11	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_6	180.117989107141	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	9118	False	NA	7	True	NA	NA	NA	15217555	15228274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
ENSMUSG00000031950.8_112667335_112679211_1	chr8	+	644	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	0	1033	0	-163	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	3906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATTTTCAGTTTTCTT	NA	False	NA	NA	False	AGTAAA	-13	NA	112667334	112679211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
ENSMUSG00000031950.8_112667335_112679547_1	chr8	+	980	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	0	697	0	173	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	17576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTGTGACCATGTCCG	NA	False	NA	NA	False	AATAAA	-18	NA	112667334	112679547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
ENSMUSG00000031950.8_112667335_112679864_1	chr8	+	1297	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	0	380	0	-380	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	18129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTGGTGTTTTGCCTGC	NA	False	NA	10	True	AATATA	-15	NA	112667334	112679864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
ENSMUSG00000031951.9_112638643_112660431_1	chr8	-	2904	7	NNC	ENSMUSG00000031951.9	novel	2984	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	98.9258981932099	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCCCTTGGCTTCTGAA	NA	False	NA	-4	True	ATTAAA	-15	NA	112660431	112638642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_112640752_112641128_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
ENSMUSG00000031951.9_112639105_112660431_2	chr8	-	2442	7	NNC	ENSMUSG00000031951.9	novel	2920	8	NA	NA	0	-400	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	98.9258981932099	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCTGATTATGTGCCTG	NA	False	NA	-6	True	NA	NA	NA	112660431	112639104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_112640752_112641128_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
ENSMUSG00000031951.9_112644821_112660435_1	chr8	-	721	4	ISM	ENSMUSG00000031951.9	ENSMUST00000034429.9	2984	7	78	6178	-4	-6116	5prime_fragment	FALSE	canonical	3	263	junction_3	2.62466929133727	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTACGAGTGTTCTGCCT	NA	False	NA	NA	False	AATATA	-18	NA	112660435	112644820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_112645067_112645459_112645589_112659991_112660162_112660259
ENSMUSG00000031954.7_112495123_112580923_1	chr8	-	1172	7	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	735.161206811132	2057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580923	112495122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571838_112580775
ENSMUSG00000031954.7_112495123_112580959_1	chr8	-	1094	6	NIC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	772.979016532791	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580959	112495122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_112495420_112505882_112506042_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ENSMUSG00000031954.7_112495123_112580959_2	chr8	-	1055	6	NIC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	769.820498557943	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580959	112495122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_112495420_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ENSMUSG00000031954.7_112495123_112580959_3	chr8	-	1209	7	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	735.161206811132	6722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580959	112495122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580780
ENSMUSG00000031954.7_112495123_112580959_4	chr8	-	1212	7	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	724.788570703362	6043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580959	112495122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_112495420_112505882_112506042_112557501_112557612_112566981_112567118_112568414_112568623_112571725_112571844_112580775
ENSMUSG00000031954.7_112495123_112580959_6	chr8	-	1208	7	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	738.776014770377	6667	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580959	112495122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568617_112571725_112571844_112580775
ENSMUSG00000031954.7_112495123_112580959_7	chr8	-	1205	7	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	734.360360374175	4334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580959	112495122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567109_112568414_112568623_112571725_112571844_112580775
ENSMUSG00000031954.7_112495123_112580959_8	chr8	-	1204	7	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	724.788570703362	3809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580959	112495122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_112495420_112505882_112506042_112557501_112557612_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ENSMUSG00000031954.7_112495123_112580959_9	chr8	-	257	2	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580959	112495122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_112495182_112580761
ENSMUSG00000031958.17_112352315_112355856_1	chr8	-	2407	7	ISM	ENSMUSG00000031958.17	ENSMUST00000070004.4	2273	11	1150	-588	-637	-180	3prime_fragment	FALSE	canonical	2	7	junction_4	3.60555127546399	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATACAGAAAAAGTTGAAAGA	NA	False	NA	NA	False	ATTAAA	-14	NA	112355856	112352314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_112353823_112353909_112354022_112354119_112354211_112354730_112354859_112354941_112355071_112355152_112355353_112355617
ENSMUSG00000031960.15_111760511_111782022_1	chr8	+	3144	21	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2274	combination_of_known_junctions	FALSE	canonical	2	881	junction_1	574.494062197339	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCATTACTGCTCTGAGC	NA	False	NA	NA	False	NA	NA	NA	111760510	111782022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111760511_111782201_1	chr8	+	3380	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2095	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_1	767.881536711079	3827	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111760510	111782201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_111760541_111760838_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111760511_111782201_2	chr8	+	3323	21	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2095	combination_of_known_junctions	FALSE	canonical	2	881	junction_1	574.494062197339	2848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111760510	111782201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111760548_111782201_1	chr8	+	3641	21	FSM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	14	2095	0	-2095	multi-exon	FALSE	canonical	2	1913	junction_1	386.82599124154	3639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111760547	111782201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111760548_111782201_2	chr8	+	3379	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2095	at_least_one_novel_splicesite	FALSE	canonical	2	99	junction_1	755.304689912074	3528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111760547	111782201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_111760577_111760838_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_111760741_111782201_1	chr8	+	3448	21	FSM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	207	2095	193	-2095	multi-exon	FALSE	canonical	2	1913	junction_1	386.82599124154	3543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111760740	111782201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031967.16_124204642_124228917_1	chr8	+	2489	17	FSM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	0	1738	0	563	multi-exon	FALSE	canonical	3	631	junction_4	44.0414843499853	437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACGTCTCAGATAAGACC	7495	False	NA	16	True	ATTAAA	-19	NA	124204641	124228917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ENSMUSG00000031969.17_26886260_26910815_1	chr9	-	2037	11	NIC	ENSMUSG00000031969.17	novel	2885	11	NA	NA	-11	412	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	90.14565990662	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCTAAGGCAGTTTGT	9278	False	NA	3	True	ATTAAA	-31	NA	26910815	26886259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901489_26901874_26901989_26902535_26902706_26903455_26903585_26910689
ENSMUSG00000031969.17_26886260_26910815_2	chr9	-	2009	11	FSM	ENSMUSG00000031969.17	ENSMUST00000120367.8	2885	11	47	829	-11	412	multi-exon	FALSE	canonical	0	0	junction_7	75.0053331437172	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCTAAGGCAGTTTGT	9278	False	NA	3	True	ATTAAA	-31	NA	26910815	26886259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901489_26901874_26901989_26902535_26902706_26903455_26903557_26910689
ENSMUSG00000031969.17_26886463_26910815_1	chr9	-	1806	11	FSM	ENSMUSG00000031969.17	ENSMUST00000120367.8	2885	11	47	1032	-11	209	multi-exon	FALSE	canonical	0	0	junction_7	75.0053331437172	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTTGGAATATTTGG	9278	False	NA	-25	True	AATAAA	-14	NA	26910815	26886462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901489_26901874_26901989_26902535_26902706_26903455_26903557_26910689
ENSMUSG00000031969.17_26886463_26910815_2	chr9	-	1834	11	NIC	ENSMUSG00000031969.17	novel	2885	11	NA	NA	-11	209	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	90.14565990662	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTTGGAATATTTGG	9278	False	NA	-25	True	AATAAA	-14	NA	26910815	26886462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901489_26901874_26901989_26902535_26902706_26903455_26903585_26910689
ENSMUSG00000031979.18_125247558_125278578_1	chr8	+	2604	18	FSM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	52	169	0	-169	multi-exon	FALSE	canonical	3	176	junction_7	26.4246660485719	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACCTGGGAGATACTGTC	NA	False	NA	NA	False	NA	NA	NA	125247557	125278578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ENSMUSG00000031981.8_125340406_125345470_1	chr8	+	728	5	ISM	ENSMUSG00000031981.8	ENSMUST00000093033.6	2330	20	37556	0	227	0	3prime_fragment	FALSE	canonical	1	2	junction_3	0.707106781186548	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTACCATCTGTGTCTGTG	NA	False	NA	NA	False	TATAAA	-23	NA	125340405	125345470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_125340629_125341286_125341366_125342891_125343009_125344171_125344231_125345220
ENSMUSG00000031982.6_125448898_125460862_1	chr8	+	1168	6	NNC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	37.0113496106262	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAGGTTGTCTTTTGAA	NA	False	NA	21	True	AATAAA	-30	NA	125448897	125460862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535_125458681_125460522
ENSMUSG00000031982.6_125448898_125460862_2	chr8	+	3010	5	ISM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	20	0	0	0	intron_retention	FALSE	canonical	3	83	junction_2	14.0890028036054	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAGGTTGTCTTTTGAA	NA	False	NA	21	True	AATAAA	-30	NA	125448897	125460862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535
ENSMUSG00000031984.9_125563684_125589753_1	chr8	-	3777	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	106	-1543	0	0	multi-exon	FALSE	canonical	3	1367	junction_2	144.59416385948	3816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCTGTTTTGCCTAC	NA	False	NA	NA	False	AATAAA	-26	NA	125589753	125563683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ENSMUSG00000031984.9_125566094_125589753_1	chr8	-	1367	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	106	867	0	-867	multi-exon	FALSE	canonical	3	1367	junction_2	144.59416385948	3361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGACTGTTAAGTAGCA	NA	False	NA	-8	True	AATACA	-16	NA	125589753	125566093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ENSMUSG00000031985.10_125589811_125616287_1	chr8	+	2436	16	FSM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	39	509	0	0	multi-exon	FALSE	canonical	3	573	junction_6	36.0101220337961	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGGGCAGCAGAGCTC	5159	False	NA	11	True	AATAAA	-16	NA	125589810	125616287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ENSMUSG00000031985.10_125589811_125616654_1	chr8	+	2803	16	FSM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	39	142	0	-142	multi-exon	FALSE	canonical	3	573	junction_6	36.0101220337961	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAAATCTGACACACTT	5159	False	NA	NA	False	AATAAA	-24	NA	125589810	125616654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ENSMUSG00000031990.16_27008680_27032657_1	chr9	-	1917	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5189	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_8	47.0729155141255	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27032657	27008679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
ENSMUSG00000031990.16_27008680_27033499_1	chr9	-	1990	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4347	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_8	53.8573056789884	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27033499	27008679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
ENSMUSG00000031990.16_27008907_27032657_1	chr9	-	1690	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5189	-227	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_8	47.0729155141255	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTGTTTCAAAACGTAT	NA	False	NA	NA	False	TATAAA	-18	NA	27032657	27008906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
ENSMUSG00000031990.16_27008907_27033499_1	chr9	-	1763	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4347	-227	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_8	53.8573056789884	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTGTTTCAAAACGTAT	NA	False	NA	NA	False	TATAAA	-18	NA	27033499	27008906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
ENSMUSG00000031990.16_27009132_27032657_1	chr9	-	1465	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5189	-452	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_8	47.0729155141255	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGTGAAATTGCTTGC	NA	False	NA	NA	False	TATAAA	-12	NA	27032657	27009131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
ENSMUSG00000031990.16_27009132_27033499_1	chr9	-	1538	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4347	-452	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_8	53.8573056789884	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGTGAAATTGCTTGC	NA	False	NA	NA	False	TATAAA	-12	NA	27033499	27009131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
ENSMUSG00000031993.8_30338404_30377038_1	chr9	+	4778	11	FSM	ENSMUSG00000031993.8	ENSMUST00000164099.3	5762	11	0	984	0	-984	multi-exon	TRUE	canonical	3	26	junction_9	7.52927619363243	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTGAAATTGTTTTAGT	NA	False	NA	NA	False	ATTAAA	-19	NA	30338403	30377038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30373526_30373712_30374515_30374604_30375581
ENSMUSG00000031995.10_31000698_31043092_1	chr9	-	1405	6	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	262.233941357712	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTGCTATACT	NA	False	NA	0	True	AGTAAA	-24	NA	31043092	31000697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31006896_31019975_31020027_31042841
ENSMUSG00000032000.18_7848700_7872858_1	chr9	-	2500	9	FSM	ENSMUSG00000032000.18	ENSMUST00000013949.15	2667	9	167	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	6.89202437604511	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCTGGGCAGGTTTAT	-13	True	NA	NA	False	AATAAA	-34	NA	7872858	7848699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_7849458_7849672_7849715_7850920_7851173_7854367_7854608_7857390_7857440_7858701_7858781_7860263_7860364_7860463_7861409_7872823
ENSMUSG00000032002.11_7184696_7207040_1	chr9	+	1080	8	FSM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	176	1165	145	0	multi-exon	FALSE	canonical	3	895	junction_7	57.310824564343	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTCCGTTGAGTGTCA	155	False	NA	24	True	AATAAA	-32	NA	7184695	7207040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206719
ENSMUSG00000032015.17_43035234_43111578_1	chr9	-	2813	13	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	5474	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	21.2895057611856	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGTTCAGAGGAGTG	5095	False	NA	NA	False	CATAAA	-17	NA	43111578	43035233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43111185
ENSMUSG00000032015.17_43035234_43117174_1	chr9	-	2644	13	FSM	ENSMUSG00000032015.17	ENSMUST00000176636.5	2522	13	-122	0	-122	0	multi-exon	FALSE	canonical	3	54	junction_12	13.5359603361646	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGTTCAGAGGAGTG	NA	False	NA	NA	False	CATAAA	-17	NA	43117174	43035233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43116950
ENSMUSG00000032018.15_42165433_42175552_1	chr9	-	2245	6	FSM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	0	2542	0	596	multi-exon	FALSE	canonical	3	174	junction_5	23.9198662203617	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCCACTTAAATGTTATA	NA	False	NA	-10	True	AATAAA	-19	NA	42175552	42165432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
ENSMUSG00000032018.15_42166029_42175552_1	chr9	-	1649	6	FSM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	0	3138	0	0	multi-exon	FALSE	canonical	3	174	junction_5	23.9198662203617	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGCTCTTCCATAATTC	NA	False	NA	-4	True	AATAAA	-29	NA	42175552	42166028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
ENSMUSG00000032030.17_53528991_53578372_1	chr9	-	2479	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	439	667	0	-667	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTCTATTTTGCCAGTCA	NA	False	NA	-4	True	ATTAAA	-21	NA	53578372	53528990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ENSMUSG00000032040.16_35035708_35087293_1	chr9	-	724	5	NNC	ENSMUSG00000032040.16	novel	1445	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	292.049974319465	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTGATGGTGTAGCCCA	NA	False	NA	-7	True	AATAAA	-18	NA	35087293	35035707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_35035839_35040825_35040871_35047639_35047786_35082372_35082548_35087066
ENSMUSG00000032042.12_35122451_35127919_1	chr9	+	2602	14	FSM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	0	391	0	-391	multi-exon	TRUE	canonical	3	518	junction_4	138.528744373691	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTTAGGCCTTGTTACA	5512	False	NA	NA	False	TATAAA	-40	NA	35122450	35127919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ENSMUSG00000032044.5_35179161_35187115_1	chr9	+	1675	7	FSM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	0	146	0	-146	multi-exon	FALSE	canonical	3	136	junction_6	10.6052921799554	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAACTGTCTAAGGGTTA	NA	False	NA	NA	False	NA	NA	NA	35179160	35187115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
ENSMUSG00000032044.5_35179161_35187261_1	chr9	+	1895	6	NIC	ENSMUSG00000032044.5	novel	1821	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	136	junction_5	9.97196068985433	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAATTTTTTGAGAT	NA	False	NA	NA	False	NA	NA	NA	35179160	35187261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35184143_35184763_35184862_35186359
ENSMUSG00000032044.5_35179161_35187261_2	chr9	+	1727	6	NIC	ENSMUSG00000032044.5	novel	1821	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	61.8093844007526	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAATTTTTTGAGAT	NA	False	NA	NA	False	NA	NA	NA	35179160	35187261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_35179375_35179697_35179864_35181260_35181463_35183997_35184143_35184763_35184862_35186359
ENSMUSG00000032047.6_53493674_53521652_1	chr9	-	1523	12	FSM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	30	1852	-22	113	multi-exon	FALSE	canonical	3	149	junction_5	11.4912830779187	530	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTATTTTTTTGTA	NA	False	NA	-25	True	AATAAA	-14	NA	53521652	53493673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_53493966_53494736_53494895_53496139_53496205_53498752_53498867_53500477_53500574_53502606_53502758_53503267_53503412_53505705_53505807_53505993_53506090_53506582_53506701_53509384_53509433_53521512
ENSMUSG00000032050.19_51996429_52000032_1	chr9	+	2635	2	ISM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	37014	-3	36858	-3	3prime_fragment	FALSE	canonical	3	758	junction_1	0	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGGTCCGCTGTTGTT	NA	False	NA	18	True	AATAAA	-18	NA	51996428	52000032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_51996646_51997614
ENSMUSG00000032058.15_50768266_50792547_1	chr9	+	3217	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	29	184	0	-184	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAAATGCTTTTAAGT	16	True	NA	14	True	ATTAAA	-20	NA	50768265	50792547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ENSMUSG00000032060.11_50664320_50667936_1	chr9	+	926	3	FSM	ENSMUSG00000032060.11	ENSMUST00000034562.9	946	3	113	-93	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTCGTGTTTGCAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	50664319	50667936	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_50664778_50665811_50665935_50667591
ENSMUSG00000032065.7_50468119_50472626_1	chr9	-	1017	5	FSM	ENSMUSG00000032065.7	ENSMUST00000034568.7	895	5	-16	-106	-1	0	multi-exon	FALSE	canonical	3	20	junction_4	2.27760839478607	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCTGGCTATTTTTTTA	6961	False	NA	NA	False	AATAAA	-15	NA	50472626	50468118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_50468792_50469548_50469601_50469686_50469799_50470519_50470599_50472525
ENSMUSG00000032068.15_50405825_50416438_1	chr9	+	1345	4	FSM	ENSMUSG00000032068.15	ENSMUST00000114474.8	1689	4	0	344	0	-344	multi-exon	FALSE	canonical	3	38	junction_1	3.39934634239519	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCGAAATGTGCTAAATTG	NA	False	NA	NA	False	AATAAA	-19	NA	50405824	50416438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_50406047_50410394_50410600_50412372_50412429_50415576
ENSMUSG00000032076.21_47699267_47741029_1	chr9	+	1311	8	ISM	ENSMUSG00000032076.21	ENSMUST00000152459.8	1784	12	257758	20856	257596	-4717	internal_fragment	FALSE	canonical	3	173	junction_7	55.5356109323797	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAGTGTATTTGTCTAC	1846	False	NA	NA	False	AATAAA	-30	NA	47699266	47741029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674
ENSMUSG00000032076.21_47699267_47761885_1	chr9	+	1437	10	ISM	ENSMUSG00000032076.21	ENSMUST00000085909.9	2126	11	257712	442	257596	0	3prime_fragment	FALSE	canonical	3	105	junction_8	78.429019572548	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTGCTGTTTGACACCT	1846	False	NA	3	True	AAAACA	-21	NA	47699266	47761885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674_47740708_47759464_47759597_47761569
ENSMUSG00000032076.21_47699267_47762130_2	chr9	+	1682	10	ISM	ENSMUSG00000032076.21	ENSMUST00000085909.9	2126	11	257712	197	257596	-197	3prime_fragment	FALSE	canonical	3	105	junction_8	78.429019572548	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTTTGGAATTGACCT	1846	False	NA	NA	False	NA	NA	NA	47699266	47762130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674_47740708_47759464_47759597_47761569
ENSMUSG00000032077.6_46194306_46210081_1	chr9	+	2207	10	NIC	ENSMUSG00000032077.6	novel	2539	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_6	39.9632547272499	926	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCCTAACTGGGTATT	NA	False	NA	45	True	AATAAA	-22	NA	46194305	46210081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_46194472_46197640_46197732_46198314_46198400_46198959_46199734_46201423_46201642_46202605_46202709_46202997_46203132_46203363_46203549_46203745_46203828_46209712
ENSMUSG00000032078.18_46184491_46192902_1	chr9	+	1816	14	FSM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	129	1039	0	120	multi-exon	FALSE	canonical	3	619	junction_8	51.2505159448701	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTCTGCGTTCATGTC	NA	False	NA	14	True	ATTAAA	-21	NA	46184490	46192902	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ENSMUSG00000032092.6_44953844_44965313_1	chr9	+	2986	6	FSM	ENSMUSG00000032092.6	ENSMUST00000034600.5	3107	6	121	0	121	0	multi-exon	FALSE	canonical	3	426	junction_5	54.042205728486	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGATTTTTATTATTTGC	NA	False	NA	15	True	AATAAA	-18	NA	44953843	44965313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
ENSMUSG00000032092.6_44953994_44965313_1	chr9	+	2751	6	NNC	ENSMUSG00000032092.6	novel	3107	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	211.37171050072	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGATTTTTATTATTTGC	NA	False	NA	15	True	AATAAA	-18	NA	44953993	44965313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963260
ENSMUSG00000032094.9_44893084_44897720_1	chr9	+	700	5	FSM	ENSMUSG00000032094.9	ENSMUST00000034602.9	1617	5	0	917	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.48746859276655	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGCCTGTGTTTTCCAAA	NA	False	NA	NA	False	AATAAA	-20	NA	44893083	44897720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44893239_44896267_44896487_44896901_44897034_44897354_44897399_44897570
ENSMUSG00000032096.17_44653437_44679110_1	chr9	-	3464	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	32	576	-15	-576	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTACTGGACTCTAAC	NA	False	NA	-17	True	AATAAA	-18	NA	44679110	44653436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ENSMUSG00000032096.17_44654867_44679110_1	chr9	-	2034	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	32	2006	-15	-2006	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCTATGGATTTGAG	NA	False	NA	62	True	AATATA	-28	NA	44679110	44654866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ENSMUSG00000032096.17_44655114_44679110_1	chr9	-	1787	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	32	2253	-15	-2253	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGATACAGTGCACGT	NA	False	NA	NA	False	NA	NA	NA	44679110	44655113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ENSMUSG00000032097.11_44516189_44545457_1	chr9	+	1548	12	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	0	744	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	7.82557789696631	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGACCTATCTTCATCG	NA	False	NA	NA	False	AATAAA	-20	NA	44516188	44545457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_44516225_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389
ENSMUSG00000032097.11_44516189_44548546_1	chr9	+	2551	14	FSM	ENSMUSG00000032097.11	ENSMUST00000217034.2	6029	14	-4	3482	0	-3482	multi-exon	FALSE	canonical	3	13	junction_1	7.66070431047592	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAGCAGCCTCTCACTG	NA	False	NA	NA	False	AGTAAA	-45	NA	44516188	44548546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44516250_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
ENSMUSG00000032103.11_35470762_35478439_1	chr9	+	1341	3	NIC	ENSMUSG00000032103.11	novel	2019	4	NA	NA	0	5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	42.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTCTTTTTCAAGGC	NA	False	NA	17	True	ATTAAA	-17	NA	35470761	35478439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_35470814_35476585_35477152_35477716
ENSMUSG00000032103.11_35470762_35478439_2	chr9	+	1755	4	FSM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	6	258	0	5	multi-exon	FALSE	canonical	3	88	junction_3	6.68331255192114	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTCTTTTTCAAGGC	NA	False	NA	17	True	ATTAAA	-17	NA	35470761	35478439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
ENSMUSG00000032112.11_44315056_44318653_1	chr9	-	976	5	FSM	ENSMUSG00000032112.11	ENSMUST00000034623.8	1220	5	244	0	-5	0	multi-exon	FALSE	canonical	3	556	junction_4	135.857462069626	3335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTCTCCTAACTGAT	1717	False	NA	-8	True	AATAAA	-17	NA	44318653	44315055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100_44318276_44318423
ENSMUSG00000032112.11_44318436_44321491_1	chr9	-	582	6	Fusion	ENSMUSG00000043923.9_ENSMUSG00000032112.11	novel	1220	5	NA	NA	1036	-720	multi-exon	FALSE	non_canonical	0	0	junction_1	0	41996	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCATCCGGGGTGGGCCG	NA	False	NA	NA	False	NA	NA	NA	44321491	44318435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr9_-_44318548_44319012_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
ENSMUSG00000032113.17_36620736_36637897_1	chr9	-	2382	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	57	958	-16	0	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	1363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGGGTCCTGTATTCC	705	False	NA	NA	False	ATTAAA	-12	NA	36637897	36620735	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
ENSMUSG00000032114.10_44308267_44314263_1	chr9	+	2016	9	FSM	ENSMUSG00000032114.10	ENSMUST00000215420.2	2128	9	118	-6	118	0	multi-exon	FALSE	canonical	1	5	junction_1	8.7740740252177	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCAGTGGCTCATCCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	44308266	44314263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44308289_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
ENSMUSG00000032115.15_44290843_44303438_1	chr9	+	4148	26	FSM	ENSMUSG00000032115.15	ENSMUST00000066601.13	4432	26	56	228	0	-222	multi-exon	FALSE	canonical	3	476	junction_1	89.8853847964173	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCTCACCCTACTTTCCA	NA	False	NA	NA	False	NA	NA	NA	44290842	44303438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ENSMUSG00000032116.19_36643722_36678897_1	chr9	-	2707	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	78	3082	-2	0	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGACCAGAGGAG	NA	False	NA	-19	True	NA	NA	NA	36678897	36643721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ENSMUSG00000032116.19_36643977_36678897_1	chr9	-	2452	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	78	3337	-2	-255	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	1617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTTATTTGTTTTGAC	NA	False	NA	-4	True	ATTAAA	-24	NA	36678897	36643976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ENSMUSG00000032121.10_37119619_37134474_1	chr9	+	997	4	FSM	ENSMUSG00000032121.10	ENSMUST00000034632.10	2619	4	100	1522	100	-1522	multi-exon	FALSE	canonical	3	46	junction_1	7.40870359029762	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGGGCTTGCTCTTCAA	NA	False	NA	9	True	AATAAA	-15	NA	37119618	37134474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_37119702_37129561_37129673_37130497_37130601_37133774
ENSMUSG00000032121.10_37119619_37134474_2	chr9	+	932	4	NNC	ENSMUSG00000032121.10	novel	2619	4	NA	NA	100	-1522	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	19.2527054375915	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGGGCTTGCTCTTCAA	NA	False	NA	9	True	AATAAA	-15	NA	37119618	37134474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_37119637_37129561_37129673_37130497_37130601_37133774
ENSMUSG00000032122.16_37141808_37166710_1	chr9	-	2692	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	324	2927	0	0	multi-exon	FALSE	canonical	3	62	junction_1	7.12469267230106	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAACAACAAAGATTGGTG	NA	False	NA	74	True	AGTAAA	-11	NA	37166710	37141807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ENSMUSG00000032122.16_37142579_37166710_1	chr9	-	1921	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	324	3698	0	-771	multi-exon	FALSE	canonical	3	62	junction_1	7.12469267230106	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGAGGGATTTCACCTT	NA	False	NA	NA	False	TATAAA	-20	NA	37166710	37142578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ENSMUSG00000032123.6_44238142_44244897_1	chr9	+	1784	8	FSM	ENSMUSG00000032123.6	ENSMUST00000215050.2	2050	8	-28	294	0	-294	multi-exon	FALSE	canonical	3	5	junction_1	96.7247303919104	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTAGTGTAGCATCCCCT	3774	False	NA	17	True	AATAAA	-20	NA	44238141	44244897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44238503_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ENSMUSG00000032123.6_44238294_44244897_2	chr9	+	1632	8	FSM	ENSMUSG00000032123.6	ENSMUST00000215050.2	2050	8	124	294	124	-294	multi-exon	FALSE	canonical	3	5	junction_1	96.7247303919104	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTAGTGTAGCATCCCCT	3926	False	NA	17	True	AATAAA	-20	NA	44238293	44244897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44238503_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ENSMUSG00000032123.6_44238829_44244897_2	chr9	+	1582	8	NNC	ENSMUSG00000032123.6	novel	2205	9	NA	NA	-451	-294	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	92.3036249758019	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTAGTGTAGCATCCCCT	4461	False	NA	17	True	AATAAA	-20	NA	44238828	44244897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243966_44244112_44244269_44244353
ENSMUSG00000032123.6_44238829_44245197_1	chr9	+	1864	8	ISM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	687	0	-451	0	3prime_fragment	FALSE	canonical	3	234	junction_1	26.2880433750745	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGTGCTCCATTTTC	4461	False	NA	NA	False	AATAAA	-32	NA	44238828	44245197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ENSMUSG00000032126.17_44247649_44255423_1	chr9	-	1490	14	FSM	ENSMUSG00000032126.17	ENSMUST00000077353.15	1605	14	102	13	102	0	multi-exon	FALSE	canonical	3	699	junction_4	86.0870620274656	1873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGAGTCTGAGACCTT	1510	False	NA	-4	True	AATAAA	-20	NA	44255423	44247648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
ENSMUSG00000032127.10_44259425_44272967_3	chr9	-	3157	16	FSM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	0	379	0	-200	multi-exon	FALSE	canonical	0	0	junction_10	77.9168787875901	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAAAGTATAATAGTA	6378	False	NA	-61	True	NA	NA	NA	44272967	44259424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271285_44272741
ENSMUSG00000032171.8_20563391_20574986_1	chr9	+	938	4	NNC	ENSMUSG00000032171.8	novel	3843	4	NA	NA	0	-2894	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1298.02679308077	4087	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTGGTCCTGTATCAT	NA	False	NA	23	True	ATTAAA	-13	NA	20563390	20574986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_20563494_20566657_20566877_20573604_20573705_20574470
ENSMUSG00000032171.8_20563391_20574986_2	chr9	+	427	3	NNC	ENSMUSG00000032171.8	novel	3843	4	NA	NA	0	-2894	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1349.5	204	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTGGTCCTGTATCAT	NA	False	NA	23	True	ATTAAA	-13	NA	20563390	20574986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_20563494_20566657_20566698_20574702
ENSMUSG00000032172.9_20578992_20657540_1	chr9	-	1787	6	FSM	ENSMUSG00000032172.9	ENSMUST00000215999.2	1895	6	105	3	105	0	multi-exon	FALSE	canonical	3	29	junction_1	2.92574776766556	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGCCTGGGTTGTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	20657540	20578991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20580081_20582995_20583103_20583430_20583651_20583922_20584070_20586869_20587020_20657466
ENSMUSG00000032178.15_21279167_21316659_1	chr9	+	3480	21	NNC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	533.927642569665	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279166	21316659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314687_21315355_21315488_21315991
ENSMUSG00000032178.15_21279167_21316659_2	chr9	+	3441	20	NNC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	542.146109856128	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279166	21316659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314687_21315355_21315488_21315991
ENSMUSG00000032178.15_21279234_21316617_2	chr9	+	3371	21	NNC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	533.927642569665	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCCGCTGAATGTAGAT	NA	False	NA	76	True	NA	NA	NA	21279233	21316617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314687_21315355_21315488_21315991
ENSMUSG00000032178.15_21279299_21316659_1	chr9	+	3309	20	NNC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	542.146109856128	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279298	21316659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314687_21315355_21315488_21315991
ENSMUSG00000032178.15_21279299_21316659_2	chr9	+	3348	21	NNC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	533.927642569665	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279298	21316659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314687_21315355_21315488_21315991
ENSMUSG00000032180.12_21418851_21421483_1	chr9	-	1305	4	NNC	ENSMUSG00000032180.12	novel	1378	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	265.636761177531	1694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	False	NA	-5	True	AATAAA	-19	NA	21421483	21418850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_21419688_21420226_21420411_21420557_21420648_21421289
ENSMUSG00000032185.16_21499982_21504068_1	chr9	+	2038	9	Fusion	ENSMUSG00000032185.16_ENSMUSG00000048429.11	novel	3585	14	NA	NA	1283	149	intron_retention	FALSE	non_canonical	0	0	junction_1	0	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTCGACTTCCCTTCAG	475	False	NA	NA	False	NA	NA	NA	21499981	21504068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr9_+_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823
ENSMUSG00000032185.16_21499982_21504068_3	chr9	+	1900	10	Fusion	ENSMUSG00000032185.16_ENSMUSG00000048429.11	novel	3585	14	NA	NA	1283	149	multi-exon	FALSE	non_canonical	0	0	junction_1	0	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTCGACTTCCCTTCAG	475	False	NA	NA	False	NA	NA	NA	21499981	21504068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr9_+_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
ENSMUSG00000032185.16_21500726_21504068_3	chr9	+	1156	10	Fusion	ENSMUSG00000032185.16_ENSMUSG00000048429.11	novel	3585	14	NA	NA	2027	149	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTCGACTTCCCTTCAG	1219	False	NA	NA	False	NA	NA	NA	21500725	21504068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr9_+_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
ENSMUSG00000032186.16_75481098_75518422_1	chr9	-	1513	10	FSM	ENSMUSG00000032186.16	ENSMUST00000098552.10	9871	10	163	8195	0	0	multi-exon	TRUE	canonical	3	14	junction_9	3.42467444609388	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTAGTTTGTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	75518422	75481097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_75481406_75483927_75484073_75484390_75484535_75489111_75489220_75493329_75493461_75495171_75495259_75499844_75499968_75502202_75502360_75504491_75504685_75518305
ENSMUSG00000032187.17_21527560_21584527_1	chr9	+	3442	24	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	0	30135	0	-12997	5prime_fragment	FALSE	canonical	3	544	junction_6	60.7286256516231	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCAACGAACCATAAAGTG	1332	False	NA	NA	False	NA	NA	NA	21527559	21584527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465
ENSMUSG00000032187.17_21597396_21614662_1	chr9	+	1094	6	ISM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	69931	851	50333	0	3prime_fragment	FALSE	canonical	3	587	junction_1	91.4758984651148	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	4461	False	NA	22	True	AATAAA	-19	NA	21597395	21614662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ENSMUSG00000032187.17_21612212_21614663_1	chr9	+	646	3	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	84652	-1	65149	1	3prime_fragment	FALSE	canonical	3	777	junction_1	40.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	NA	False	NA	23	True	AATAAA	-20	NA	21612211	21614663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_21612283_21612383_21612527_21614231
ENSMUSG00000032192.10_75221423_75252763_1	chr9	+	1710	11	FSM	ENSMUSG00000032192.10	ENSMUST00000215875.2	2105	11	5	390	0	4	multi-exon	FALSE	canonical	3	15	junction_6	3.38230690505755	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTGTCTTTTTTAAGA	380	False	NA	NA	False	TTTAAA	-36	NA	75221422	75252763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_75221666_75234414_75234552_75239154_75239197_75240090_75240168_75241450_75241584_75242932_75243077_75244552_75244645_75247469_75247519_75250789_75250887_75251762_75251930_75252234
ENSMUSG00000032194.10_21678080_21681422_1	chr9	-	2512	3	ISM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	28618	0	28377	0	3prime_fragment	FALSE	canonical	3	444	junction_2	20	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTCGTGTCTGTTTG	NA	False	NA	-12	True	AATAAA	-15	NA	21681422	21678079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_21680301_21681049_21681140_21681221
ENSMUSG00000032198.10_21741211_21763914_1	chr9	-	3041	22	ISM	ENSMUSG00000032198.10	ENSMUST00000034728.9	6467	49	17	29735	0	-5669	5prime_fragment	TRUE	canonical	0	0	junction_4	44.4641566263186	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTTATGTGTACATCT	6273	False	NA	NA	False	NA	NA	NA	21763914	21741210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21743237_21744139_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ENSMUSG00000032215.16_73020730_73029887_1	chr9	+	815	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	0	728	0	36	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTGTGAAATCCGAAT	8580	False	NA	26	True	CATAAA	-19	NA	73020729	73029887	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
ENSMUSG00000032215.16_73020730_73030615_1	chr9	+	1537	6	NNC	ENSMUSG00000032215.16	novel	1543	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	377.547136130047	4435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACATATCTCTTATTT	8580	False	NA	13	True	AATAAA	-18	NA	73020729	73030615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029551
ENSMUSG00000032215.16_73020730_73030615_2	chr9	+	785	3	NNC	ENSMUSG00000032215.16	novel	1543	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	488.5	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACATATCTCTTATTT	8580	False	NA	13	True	AATAAA	-18	NA	73020729	73030615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_73020866_73022169_73022206_73030002
ENSMUSG00000032215.16_73020730_73030615_3	chr9	+	1522	7	NNC	ENSMUSG00000032215.16	novel	1543	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	347.474419522103	4431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACATATCTCTTATTT	8580	False	NA	13	True	AATAAA	-18	NA	73020729	73030615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545_73029983_73030003
ENSMUSG00000032216.16_72569720_72655443_1	chr9	+	3716	29	FSM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	92	1691	0	3	multi-exon	FALSE	non_canonical	0	0	junction_1	553.560943449088	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGAGTAGTTCAATGCA	NA	False	NA	20	True	TATAAA	-17	NA	72569719	72655443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_72569720_72655443_2	chr9	+	3222	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	739.947650556986	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGAGTAGTTCAATGCA	NA	False	NA	20	True	TATAAA	-17	NA	72569719	72655443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407_72654816_72655309
ENSMUSG00000032216.16_72569720_72656860_1	chr9	+	5124	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	0	-274	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	553.560943449088	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCCAACAAATGAAACACAA	NA	False	NA	NA	False	NA	NA	NA	72569719	72656860	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_72569896_72577242_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_72569720_72656911_1	chr9	+	5184	29	FSM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	92	223	0	-223	multi-exon	FALSE	non_canonical	0	0	junction_1	553.560943449088	2433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTCGATTTTATTTA	NA	False	NA	NA	False	AATGAA	-38	NA	72569719	72656911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_72569720_72657134_1	chr9	+	971	11	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1140.87747370171	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTCCGTTACCTAAA	NA	False	NA	NA	False	AATAAA	-27	NA	72569719	72657134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625646_72657109
ENSMUSG00000032216.16_72569720_72657134_2	chr9	+	5398	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	553.560943449088	3609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTCCGTTACCTAAA	NA	False	NA	NA	False	AATAAA	-27	NA	72569719	72657134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_72569896_72577242_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_72569769_72580036_1	chr9	+	594	4	NNC	ENSMUSG00000032216.16	novel	660	8	NA	NA	0	606	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1391.82190750908	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTTTTGTCTTCATGT	NA	False	NA	NA	False	NA	NA	NA	72569768	72580036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72579808
ENSMUSG00000032216.16_72569769_72656860_1	chr9	+	5084	29	FSM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	141	274	0	-274	multi-exon	FALSE	non_canonical	0	0	junction_1	553.560943449088	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCCAACAAATGAAACACAA	NA	False	NA	NA	False	NA	NA	NA	72569768	72656860	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_72569769_72657134_1	chr9	+	1453	11	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1140.87747370171	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTCCGTTACCTAAA	NA	False	NA	NA	False	AATAAA	-27	NA	72569768	72657134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625654_72656586
ENSMUSG00000032218.8_70314974_70328829_2	chr9	-	1523	9	NNC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_8	448.011840663838	1035	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	False	NA	-8	True	AATAAA	-14	NA	70328829	70314973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326404_70328698
ENSMUSG00000032218.8_70314974_70328829_3	chr9	-	1525	9	NNC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	470.774079973611	2255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	False	NA	-8	True	AATAAA	-14	NA	70328829	70314973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318168_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ENSMUSG00000032218.8_70314974_70328859_1	chr9	-	1553	9	NNC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_8	448.011840663838	1550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	False	NA	-8	True	AATAAA	-14	NA	70328859	70314973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326404_70328698
ENSMUSG00000032218.8_70314974_70328859_2	chr9	-	1556	9	NNC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	472.383517388149	2349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	False	NA	-8	True	AATAAA	-14	NA	70328859	70314973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_70315312_70316561_70316664_70317398_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ENSMUSG00000032218.8_70314974_70328859_3	chr9	-	1555	9	NNC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	470.774079973611	2712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	False	NA	-8	True	AATAAA	-14	NA	70328859	70314973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318168_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ENSMUSG00000032221.15_72345817_72365858_1	chr9	+	1246	7	NIC	ENSMUSG00000032221.15	novel	5250	10	NA	NA	0	-3449	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	33.4535332795938	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGAATTAGTCATTTTT	NA	False	NA	5	True	ATTAAA	-17	NA	72345816	72365858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72359862_72360121_72364059_72364186_72365594
ENSMUSG00000032221.15_72345817_72365858_2	chr9	+	1801	10	FSM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	0	3449	0	-3449	multi-exon	FALSE	canonical	3	40	junction_2	21.6834692682276	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGAATTAGTCATTTTT	NA	False	NA	5	True	ATTAAA	-17	NA	72345816	72365858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72355810_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
ENSMUSG00000032221.15_72368385_72399247_1	chr9	+	1275	12	NIC	ENSMUSG00000032221.15	novel	5250	10	NA	NA	22568	29940	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCGATGCGGTTGCCGTG	NA	False	NA	NA	False	NA	NA	NA	72368384	72399247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ENSMUSG00000032221.15_72368385_72399247_2	chr9	+	1140	11	NIC	ENSMUSG00000032221.15	novel	5250	10	NA	NA	22568	29940	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCGATGCGGTTGCCGTG	NA	False	NA	NA	False	NA	NA	NA	72368384	72399247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_72368561_72369137_72369273_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ENSMUSG00000032224.16_69997847_70048658_1	chr9	-	1447	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	202	2054	202	-2054	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCTAAGTGCAGTTGAG	NA	False	NA	-9	True	AATACA	-16	NA	70048658	69997846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
ENSMUSG00000032249.15_62248611_62284954_1	chr9	+	973	7	FSM	ENSMUSG00000032249.15	ENSMUST00000085519.13	2113	7	0	1140	0	0	multi-exon	FALSE	canonical	3	492	junction_5	26.6546848081575	2206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCCCTCCTATTCCTGC	NA	False	NA	NA	False	NA	NA	NA	62248610	62284954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
ENSMUSG00000032249.15_62248611_62285100_2	chr9	+	1114	7	NNC	ENSMUSG00000032249.15	novel	2113	7	NA	NA	0	37	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	199.853904973942	2906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTATTTCCCCCCCTCC	NA	False	NA	8	True	AATAAA	-19	NA	62248610	62285100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281940_62282034_62284581_62284646_62284835
ENSMUSG00000032249.15_62248611_62285100_3	chr9	+	884	7	NNC	ENSMUSG00000032249.15	novel	2113	7	NA	NA	0	37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	202.512551051369	1488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTATTTCCCCCCCTCC	NA	False	NA	8	True	AATAAA	-19	NA	62248610	62285100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62285070
ENSMUSG00000032253.14_82782709_82857479_1	chr9	-	2870	23	ISM	ENSMUSG00000032253.14	ENSMUST00000188868.7	3317	25	-18	6625	0	0	5prime_fragment	FALSE	canonical	3	34	junction_11	7.22484235865655	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAAAGCCCAAAG	NA	False	NA	NA	False	NA	NA	NA	82857479	82782708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ENSMUSG00000032254.11_61824562_61854019_1	chr9	-	3403	24	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_17	70.6780554601603	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854019	61824561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ENSMUSG00000032254.11_61824562_61854019_2	chr9	-	3091	23	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_16	70.2958329649162	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854019	61824561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ENSMUSG00000032261.17_83430382_83481657_1	chr9	+	2822	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	1	1742	0	-1742	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATCACATACTTACTGAAA	NA	False	NA	NA	False	NA	NA	NA	83430381	83481657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
ENSMUSG00000032261.17_83430382_83482345_1	chr9	+	3510	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	1	1054	0	-1054	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGTTGTTTCTTCCCA	NA	False	NA	NA	False	AATAAA	-24	NA	83430381	83482345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
ENSMUSG00000032263.15_83871282_84006293_1	chr9	+	894	7	ISM	ENSMUSG00000032263.15	ENSMUST00000190166.7	1398	11	40448	0	40448	0	3prime_fragment	FALSE	canonical	3	616	junction_6	42.5910788780937	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTGTGTGTGTCCTCTT	4716	False	NA	NA	False	AATAAA	-20	NA	83871281	84006293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
ENSMUSG00000032267.9_48896685_48952868_1	chr9	+	3271	24	FSM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	-80	942	0	-942	multi-exon	FALSE	canonical	3	612	junction_8	78.9995812484415	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCAGTCTGGTCTCCGGT	NA	False	NA	20	True	NA	NA	NA	48896684	48952868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ENSMUSG00000032271.14_48503191_48516377_1	chr9	-	953	3	FSM	ENSMUSG00000032271.14	ENSMUST00000034808.12	1043	3	76	14	0	0	multi-exon	FALSE	canonical	3	43	junction_2	2.5	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTGTCTCTGAATGCA	NA	False	NA	-4	True	ATTAAA	-19	NA	48516377	48503190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_48503663_48514653_48514862_48516104
ENSMUSG00000032279.12_54493765_54511229_1	chr9	+	1717	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	-30	716	0	0	multi-exon	FALSE	canonical	3	1656	junction_1	98.4146330583008	5311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGAATGATGTAATTTT	NA	False	NA	55	True	AATAAA	-22	NA	54493764	54511229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUSG00000032279.12_54493765_54511229_2	chr9	+	1659	12	NNC	ENSMUSG00000032279.12	novel	1812	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	552.059824282457	1119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGAATGATGTAATTTT	NA	False	NA	55	True	AATAAA	-22	NA	54493764	54511229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565_54511005_54511062
ENSMUSG00000032279.12_54493765_54511229_3	chr9	+	1693	11	NNC	ENSMUSG00000032279.12	novel	1812	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	555.128237437081	4432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGAATGATGTAATTTT	NA	False	NA	55	True	AATAAA	-22	NA	54493764	54511229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_54493828_54497141_54497181_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUSG00000032293.9_54771073_54817316_1	chr9	+	3272	22	FSM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	0	2498	0	-2498	multi-exon	TRUE	canonical	3	193	junction_6	38.4690587449917	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGTTGAAGATTCATAT	2626	False	NA	4	True	AATAAA	-14	NA	54771072	54817316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ENSMUSG00000032293.9_54771073_54817652_1	chr9	+	3608	22	FSM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	0	2162	0	-2162	multi-exon	FALSE	canonical	3	193	junction_6	38.4690587449917	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGACTGCAAAATATAGCT	2626	False	NA	NA	False	NA	NA	NA	54771072	54817652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ENSMUSG00000032294.18_59563856_59586658_1	chr9	+	2221	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	7087.44312146489	6133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1869	False	NA	20	True	AATAAA	-20	NA	59563855	59586658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578867_59579013_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ENSMUSG00000032294.18_59563856_59586658_10	chr9	+	2218	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5360.55493862343	9652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1869	False	NA	20	True	AATAAA	-20	NA	59563855	59586658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579212_59579357_59582850_59583018_59585326_59585509_59586010
ENSMUSG00000032294.18_59563856_59586658_11	chr9	+	758	6	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	7400.22546683545	763	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1869	False	NA	20	True	AATAAA	-20	NA	59563855	59586658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59586555
ENSMUSG00000032294.18_59563856_59586658_12	chr9	+	2218	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5383.62981639711	22364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1869	False	NA	20	True	AATAAA	-20	NA	59563855	59586658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583009_59585326_59585509_59586010
ENSMUSG00000032294.18_59563856_59586658_13	chr9	+	2217	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	5361.07569056808	12479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1869	False	NA	20	True	AATAAA	-20	NA	59563855	59586658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582860_59583018_59585326_59585509_59586010
ENSMUSG00000032294.18_59563856_59586658_2	chr9	+	2220	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6961.50973640057	7641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1869	False	NA	20	True	AATAAA	-20	NA	59563855	59586658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_59563922_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579013_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ENSMUSG00000032294.18_59563856_59586658_3	chr9	+	2216	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5360.55493862343	5429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1869	False	NA	20	True	AATAAA	-20	NA	59563855	59586658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59578998_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ENSMUSG00000032294.18_59563856_59586658_4	chr9	+	2215	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	5337.10957447943	12356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1869	False	NA	20	True	AATAAA	-20	NA	59563855	59586658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586022
ENSMUSG00000032294.18_59563856_59586658_5	chr9	+	772	6	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	7400.22546683545	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1869	False	NA	20	True	AATAAA	-20	NA	59563855	59586658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59586541
ENSMUSG00000032294.18_59563856_59586658_6	chr9	+	2222	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	330	junction_10	5241.27517022337	27584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1869	False	NA	20	True	AATAAA	-20	NA	59563855	59586658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586015
ENSMUSG00000032294.18_59563856_59586658_7	chr9	+	2221	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6815.91058406725	4798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1869	False	NA	20	True	AATAAA	-20	NA	59563855	59586658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575841_59575964_59576195_59576383_59577749_59578021_59578857_59579013_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ENSMUSG00000032294.18_59563856_59586658_8	chr9	+	2206	12	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	5133.0922325406	24110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1869	False	NA	20	True	AATAAA	-20	NA	59563855	59586658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010_59586357_59586377
ENSMUSG00000032294.18_59563856_59586658_9	chr9	+	2216	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7085.08993662042	4652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1869	False	NA	20	True	AATAAA	-20	NA	59563855	59586658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576210_59576383_59577749_59578021_59578857_59579013_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ENSMUSG00000032294.18_59564523_59586658_1	chr9	+	2185	11	Fusion	ENSMUSG00000111394.2_ENSMUSG00000032294.18	novel	625	5	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_7	6949.01488629863	3499	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	2536	False	NA	20	True	AATAAA	-20	NA	59564522	59586658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr9_+_59564554_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579013_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ENSMUSG00000032295.16_57038054_57049491_1	chr9	+	3225	26	FSM	ENSMUSG00000032295.16	ENSMUST00000160147.8	3820	26	80	515	0	0	multi-exon	FALSE	canonical	2	160	junction_17	33.744593641056	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGGTGCCTTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	57038053	57049491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ENSMUSG00000032299.11_57062321_57065600_1	chr9	-	842	8	NNC	ENSMUSG00000032299.11	novel	858	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	376.107832995826	3077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGGTCTTGCTTGCTT	6292	False	NA	-2	True	AATAAA	-17	NA	57065600	57062320	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_57062557_57062690_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
ENSMUSG00000032299.11_57062321_57065600_2	chr9	-	874	8	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	347.483959400742	3127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGGTCTTGCTTGCTT	6292	False	NA	-2	True	AATAAA	-17	NA	57065600	57062320	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_57062565_57062695_57062873_57063185_57063296_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
ENSMUSG00000032301.14_54858099_54865314_1	chr9	+	1139	8	NNC	ENSMUSG00000032301.14	novel	1165	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	658.455552247617	1881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGTGAAAGGATACTT	NA	False	NA	2	True	AATAAA	-15	NA	54858098	54865314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_54858188_54859598_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ENSMUSG00000032306.15_57451863_57460046_1	chr9	-	1456	8	FSM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	0	324	0	-324	multi-exon	FALSE	canonical	3	201	junction_3	33.2393914333151	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCATGCCCAGGCTGGAC	8951	False	NA	-2	True	AGTAAA	-20	NA	57460046	57451862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
ENSMUSG00000032309.16_55116270_55131717_1	chr9	+	2047	7	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	454.747090883127	1990	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	False	NA	11	True	AATAAA	-18	NA	55116269	55131717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_55116465_55116636_55116780_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ENSMUSG00000032314.15_55361792_55419450_1	chr9	-	1308	12	NIC	ENSMUSG00000032314.15	novel	1392	12	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	491.447633893484	3940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACTATCAGAAACATGC	NA	False	NA	-13	True	AATAAA	-30	NA	55419450	55361791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394081_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ENSMUSG00000032314.15_55381821_55419450_1	chr9	-	1032	10	NIC	ENSMUSG00000032314.15	novel	828	8	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	512.416304517921	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTATGATTTATTACT	NA	False	NA	NA	False	ATTAAA	-33	NA	55419450	55381820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_55381940_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ENSMUSG00000032316.9_57657995_57672397_1	chr9	-	1650	12	NIC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	91.1213884772205	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCCCTGGTACCAGTGT	9814	False	NA	-12	True	AATAAA	-18	NA	57672397	57657994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57668106_57668324_57668998_57669151_57672356
ENSMUSG00000032316.9_57657995_57672397_2	chr9	-	1747	13	FSM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	746	3	0	0	multi-exon	FALSE	canonical	3	232	junction_10	47.1024297556813	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCCCTGGTACCAGTGT	9814	False	NA	-12	True	AATAAA	-18	NA	57672397	57657994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
ENSMUSG00000032320.8_55949301_55966170_1	chr9	+	1673	7	FSM	ENSMUSG00000032320.8	ENSMUST00000114276.3	2024	7	160	191	132	-191	multi-exon	FALSE	canonical	3	320	junction_5	26.0666879795309	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGTTTGGGTTTTTGTT	1120	False	NA	4	True	AATAAA	-15	NA	55949300	55966170	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
ENSMUSG00000032320.8_55949301_55966363_1	chr9	+	1866	7	FSM	ENSMUSG00000032320.8	ENSMUST00000114276.3	2024	7	160	-2	132	2	multi-exon	FALSE	canonical	3	320	junction_5	26.0666879795309	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCACCTGAGACATTTTC	1120	False	NA	20	True	ATTAAA	-21	NA	55949300	55966363	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
ENSMUSG00000032324.12_56043168_56068237_1	chr9	-	1612	7	FSM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	104	0	-33	0	multi-exon	FALSE	canonical	3	718	junction_1	24.1522945769824	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTACATTTTAATTATT	NA	False	NA	-3	True	AATAAA	-17	NA	56068237	56043167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
ENSMUSG00000032328.13_79677728_79700712_1	chr9	-	2155	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	0	1503	0	-1503	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGATAGAAATGTTCAGG	NA	False	NA	NA	False	NA	NA	NA	79700712	79677727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ENSMUSG00000032328.13_79678078_79700712_1	chr9	-	1805	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	0	1853	0	1756	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCGTGTGTAAAGGCTT	NA	False	NA	0	True	AATAAA	-18	NA	79700712	79678077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ENSMUSG00000032329.5_56326114_56397438_1	chr9	+	1343	9	FSM	ENSMUSG00000032329.5	ENSMUST00000215269.2	1700	9	186	171	0	-127	multi-exon	FALSE	canonical	3	179	junction_3	23.7276210354093	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGTGTTAGGCTTGTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	56326113	56397438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105
ENSMUSG00000032329.5_56326114_56397609_1	chr9	+	1514	9	FSM	ENSMUSG00000032329.5	ENSMUST00000215269.2	1700	9	186	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	23.7276210354093	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTCTTCCCTGATGAG	NA	False	NA	NA	False	AATAAA	-18	NA	56326113	56397609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105
ENSMUSG00000032329.5_56326114_56404220_1	chr9	+	3557	10	FSM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	221	0	0	0	multi-exon	FALSE	canonical	3	83	junction_9	43.8482230730809	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGACCAGTTTTGCT	NA	False	NA	11	True	ATTAAA	-17	NA	56326113	56404220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
ENSMUSG00000032330.8_79662688_79666995_1	chr9	-	467	4	NNC	ENSMUSG00000032330.8	novel	659	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3032.26365754841	18826	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79666995	79662687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_79662888_79663558_79663644_79665771_79665880_79666921
ENSMUSG00000032330.8_79662688_79666995_2	chr9	-	442	4	NNC	ENSMUSG00000032330.8	novel	477	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3032.26365754841	2402	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79666995	79662687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_79662888_79663558_79663644_79665771_79665839_79666905
ENSMUSG00000032330.8_79662688_79666995_3	chr9	-	605	4	NNC	ENSMUSG00000032330.8	novel	659	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	2932.05642662089	420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79666995	79662687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_79662888_79663402_79663644_79665771_79665862_79666921
ENSMUSG00000032330.8_79662688_79666995_4	chr9	-	428	4	NNC	ENSMUSG00000032330.8	novel	659	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3032.26365754841	1421	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79666995	79662687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_79662888_79663558_79663644_79665771_79665841_79666921
ENSMUSG00000032330.8_79662688_79666995_5	chr9	-	457	4	NNC	ENSMUSG00000032330.8	novel	659	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2777.2557598384	11095	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79666995	79662687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_79662888_79663558_79663644_79665763_79665862_79666921
ENSMUSG00000032330.8_79662688_79666995_6	chr9	-	1120	3	NIC	ENSMUSG00000032330.8	novel	659	4	NA	NA	-3	0	intron_retention	FALSE	canonical	3	5621	junction_2	538.5	483	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79666995	79662687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_79663644_79665771_79665862_79666921
ENSMUSG00000032330.8_79662688_79666995_7	chr9	-	443	4	NNC	ENSMUSG00000032330.8	novel	659	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	263	junction_1	2814.19651055146	26015	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79666995	79662687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_79662882_79663558_79663644_79665771_79665862_79666921
ENSMUSG00000032330.8_79662688_79666995_8	chr9	-	441	4	NNC	ENSMUSG00000032330.8	novel	477	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3032.26365754841	6808	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79666995	79662687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_79662888_79663558_79663644_79665771_79665850_79666917
ENSMUSG00000032330.8_79662688_79666995_9	chr9	-	440	4	NNC	ENSMUSG00000032330.8	novel	659	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2936.71725268576	19602	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79666995	79662687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_79662882_79663561_79663644_79665771_79665862_79666921
ENSMUSG00000032336.18_58489690_58560161_1	chr9	+	1887	7	NIC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	144.809836989373	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGAATAATACTCTTTA	17	False	NA	NA	False	AATAAA	-16	NA	58489689	58560161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58558540_58558616_58559141
ENSMUSG00000032336.18_58489690_58560161_2	chr9	+	1906	7	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	144.809836989373	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGAATAATACTCTTTA	17	False	NA	NA	False	AATAAA	-16	NA	58489689	58560161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58558521_58558616_58559141
ENSMUSG00000032336.18_58560164_58648850_1	chr9	+	986	7	NNC	ENSMUSG00000032336.18	novel	4531	5	NA	NA	905	83612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCACGTGATAGCTGAC	NA	False	NA	NA	False	NA	NA	NA	58560163	58648850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_58560390_58561961_58562082_58565039_58565127_58567456_58567655_58573115_58573200_58619298_58619389_58648669
ENSMUSG00000032336.18_58560164_58648850_2	chr9	+	992	7	NNC	ENSMUSG00000032336.18	novel	4531	5	NA	NA	905	83612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCACGTGATAGCTGAC	NA	False	NA	NA	False	NA	NA	NA	58560163	58648850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_58560390_58565039_58565127_58567456_58567655_58571718_58571845_58573115_58573200_58619298_58619389_58648669
ENSMUSG00000032336.18_58560164_58648850_3	chr9	+	782	5	NIC	ENSMUSG00000032336.18	novel	4531	5	NA	NA	905	83612	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCACGTGATAGCTGAC	NA	False	NA	NA	False	NA	NA	NA	58560163	58648850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_58560390_58565039_58565127_58567456_58567655_58619298_58619389_58648669
ENSMUSG00000032336.18_58560164_58648850_4	chr9	+	902	6	NNC	ENSMUSG00000032336.18	novel	4531	5	NA	NA	905	83612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCACGTGATAGCTGAC	NA	False	NA	NA	False	NA	NA	NA	58560163	58648850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_58560426_58565039_58565127_58567456_58567655_58573115_58573200_58619298_58619389_58648669
ENSMUSG00000032346.8_78284679_78285896_1	chr9	-	739	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	111	1288	111	-1288	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	12080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGGTTCGGGGAGTAT	NA	False	NA	-9	True	AGTAAA	-24	NA	78285896	78284678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_78284974_78285256_78285440_78285635
ENSMUSG00000032346.8_78284730_78285722_1	chr9	-	514	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	285	1339	285	-1339	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	2169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGGTTTGATCACAT	NA	False	NA	-9	True	TATAAA	-16	NA	78285722	78284729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_78284974_78285256_78285440_78285635
ENSMUSG00000032346.8_78284730_78285835_1	chr9	-	627	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	172	1339	172	-1339	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	10397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGGTTTGATCACAT	NA	False	NA	-9	True	TATAAA	-16	NA	78285835	78284729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_78284974_78285256_78285440_78285635
ENSMUSG00000032348.7_78099229_78116631_1	chr9	+	446	4	NNC	ENSMUSG00000032348.7	novel	977	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1421.3981379848	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	False	NA	17	True	ATTAAA	-16	NA	78099228	78116631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_78099347_78105551_78105659_78106771_78106804_78116442
ENSMUSG00000032348.7_78099229_78116631_13	chr9	+	971	7	NNC	ENSMUSG00000032348.7	novel	977	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1243.85757491228	23871	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	False	NA	17	True	ATTAAA	-16	NA	78099228	78116631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_78099347_78105551_78105653_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ENSMUSG00000032348.7_78099229_78116631_2	chr9	+	956	6	NNC	ENSMUSG00000032348.7	novel	977	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1325.31587178303	3021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	False	NA	17	True	ATTAAA	-16	NA	78099228	78116631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_78099347_78105551_78105690_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ENSMUSG00000032348.7_78099229_78116631_4	chr9	+	925	6	NIC	ENSMUSG00000032348.7	novel	977	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	20	junction_2	1317.60683058339	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	False	NA	17	True	ATTAAA	-16	NA	78099228	78116631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_78099347_78105551_78105659_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ENSMUSG00000032348.7_78099229_78116631_5	chr9	+	443	4	NNC	ENSMUSG00000032348.7	novel	977	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1421.3981379848	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	False	NA	17	True	ATTAAA	-16	NA	78099228	78116631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_78099347_78105551_78105659_78106771_78106814_78116455
ENSMUSG00000032348.7_78099229_78116631_6	chr9	+	919	7	NNC	ENSMUSG00000032348.7	novel	977	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	1231.91878339803	2753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	False	NA	17	True	ATTAAA	-16	NA	78099228	78116631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_78099347_78105609_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ENSMUSG00000032348.7_78099229_78116631_7	chr9	+	955	7	NNC	ENSMUSG00000032348.7	novel	977	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1234.43747872822	20477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	False	NA	17	True	ATTAAA	-16	NA	78099228	78116631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_78099347_78105551_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115193_78116338
ENSMUSG00000032348.7_78099229_78116631_8	chr9	+	967	7	NNC	ENSMUSG00000032348.7	novel	977	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1243.85757491228	24300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	False	NA	17	True	ATTAAA	-16	NA	78099228	78116631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_78099347_78105551_78105659_78106781_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ENSMUSG00000032349.14_77824716_77891801_1	chr9	+	2858	9	NNC	ENSMUSG00000032349.14	novel	2782	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	242.341152871319	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCTTCTGTTGTTTG	NA	False	NA	11	True	ATTAAA	-19	NA	77824715	77891801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_77824809_77829157_77829304_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
ENSMUSG00000032366.16_66929875_66951071_1	chr9	-	1593	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113696.8	1714	8	118	3	-11	0	multi-exon	FALSE	canonical	3	370	junction_1	100.853500541273	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTGGTCCTGTCGT	NA	False	NA	-3	True	AATAAA	-23	NA	66951071	66929874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ENSMUSG00000032366.16_66929875_66951211_1	chr9	-	1733	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	-127	1	-22	0	multi-exon	FALSE	canonical	3	209	junction_4	182.146722648058	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTGGTCCTGTCGT	NA	False	NA	-3	True	AATAAA	-23	NA	66951211	66929874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ENSMUSG00000032366.16_66936130_66951211_1	chr9	-	1779	8	ISM	ENSMUSG00000032366.16	ENSMUST00000113684.8	887	9	-196	800	-22	0	5prime_fragment	FALSE	canonical	3	256	junction_1	130.784134343269	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGGAAGTTAGTGGT	NA	False	NA	-9	True	AATAAA	-15	NA	66951211	66936129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ENSMUSG00000032369.14_92132265_92154034_1	chr9	+	1544	8	NNC	ENSMUSG00000032369.14	novel	2302	9	NA	NA	-130	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	138.731424570158	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGATGTTACTTTACAA	NA	False	NA	NA	False	NA	NA	NA	92132264	92154034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_92132414_92141302_92141408_92145085_92145335_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
ENSMUSG00000032369.14_92132395_92154034_1	chr9	+	1414	8	NNC	ENSMUSG00000032369.14	novel	2302	9	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	138.731424570158	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGATGTTACTTTACAA	NA	False	NA	NA	False	NA	NA	NA	92132394	92154034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_92132414_92141302_92141408_92145085_92145335_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
ENSMUSG00000032381.6_66034000_66046239_1	chr9	+	1135	5	FSM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	107	-2	107	2	multi-exon	FALSE	canonical	3	677	junction_3	21.6376408140999	3725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCACCTTAGGTTTTTA	1490	False	NA	19	True	AATAAA	-20	NA	66033999	66046239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583_66043630_66045618
ENSMUSG00000032381.6_66034106_66046239_1	chr9	+	1029	5	FSM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	213	-2	213	2	multi-exon	FALSE	canonical	3	677	junction_3	21.6376408140999	2502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCACCTTAGGTTTTTA	1596	False	NA	19	True	AATAAA	-20	NA	66034105	66046239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583_66043630_66045618
ENSMUSG00000032382.15_65995415_66033869_1	chr9	-	1938	15	NIC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_14	103.740477802514	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACTGGGCATGGTAGCA	NA	False	NA	-4	True	AATAAA	-20	NA	66033869	65995414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66033724
ENSMUSG00000032383.8_65967513_65973905_1	chr9	+	887	5	NNC	ENSMUSG00000032383.8	novel	892	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1005.05086935936	13086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGGTGTGGGCTGTGT	1574	False	NA	16	True	AATAAA	-16	NA	65967512	65973905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_65967683_65968748_65968863_65970270_65970365_65972773_65972954_65973576
ENSMUSG00000032386.16_65739041_65792338_1	chr9	-	3396	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	0	-1397	0	0	multi-exon	TRUE	canonical	3	144	junction_4	28.3474229673332	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGGTTGGAAGTTCTCT	NA	False	NA	-11	True	AATAAA	-28	NA	65792338	65739040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ENSMUSG00000032386.16_65740647_65792338_2	chr9	-	1790	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	0	209	0	-209	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATACAACATAGTGGAGTC	NA	False	NA	NA	False	AATAAA	-26	NA	65792338	65740646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ENSMUSG00000032387.16_65536930_65567808_1	chr9	+	1915	9	NIC	ENSMUSG00000032387.16	novel	1803	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	514.959813359256	2283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGATTTTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	65536929	65567808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_65537005_65537987_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ENSMUSG00000032387.16_65537841_65567398_1	chr9	+	1577	8	FSM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	0	410	0	307	multi-exon	FALSE	canonical	3	1453	junction_4	112.168059042616	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACTTCGAAACCAACCAA	NA	False	NA	NA	False	NA	NA	NA	65537840	65567398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ENSMUSG00000032387.16_65537841_65567808_1	chr9	+	1915	8	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_5	564.138751205982	2312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGATTTTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	65537840	65567808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558900_65558987_65566416_65566487_65566719
ENSMUSG00000032387.16_65537975_65567808_1	chr9	+	1853	8	FSM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	134	0	134	0	multi-exon	FALSE	canonical	3	1453	junction_4	112.168059042616	2365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGATTTTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	65537974	65567808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ENSMUSG00000032388.8_65368235_65394470_1	chr9	+	1392	9	FSM	ENSMUSG00000032388.8	ENSMUST00000034955.8	2680	9	6	1282	0	-1282	multi-exon	FALSE	canonical	3	680	junction_7	65.1440711039769	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTCCACTCTGTTCAT	7182	False	NA	34	True	TTTAAA	-41	NA	65368234	65394470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
ENSMUSG00000032388.8_65368235_65394738_1	chr9	+	1660	9	FSM	ENSMUSG00000032388.8	ENSMUST00000034955.8	2680	9	6	1014	0	-1014	multi-exon	FALSE	canonical	3	680	junction_7	65.1440711039769	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGGCTTCTGTGATGA	7182	False	NA	11	True	AATAAA	-13	NA	65368234	65394738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
ENSMUSG00000032388.8_65368382_65394738_1	chr9	+	1513	9	FSM	ENSMUSG00000032388.8	ENSMUST00000034955.8	2680	9	153	1014	147	-1014	multi-exon	FALSE	canonical	3	680	junction_7	65.1440711039769	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGGCTTCTGTGATGA	7329	False	NA	11	True	AATAAA	-13	NA	65368381	65394738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
ENSMUSG00000032392.12_65122709_65146500_1	chr9	+	2230	6	FSM	ENSMUSG00000032392.12	ENSMUST00000213396.2	2518	6	282	6	273	0	multi-exon	FALSE	canonical	3	51	junction_2	11.7915223783869	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTTGTCTGTGACTG	NA	False	NA	NA	False	AATAAA	-15	NA	65122708	65146500	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
ENSMUSG00000032396.18_64214293_64248448_1	chr9	-	3229	17	FSM	ENSMUSG00000032396.18	ENSMUST00000168844.9	3575	17	91	255	-10	0	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTGTACTTTTTTTTC	5178	False	NA	-3	True	ATTAAA	-13	NA	64248448	64214292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
ENSMUSG00000032396.18_64214544_64248448_1	chr9	-	2978	17	FSM	ENSMUSG00000032396.18	ENSMUST00000168844.9	3575	17	91	506	-10	-251	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACTCTGTCACCAGAG	5178	False	NA	NA	False	NA	NA	NA	64248448	64214543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
ENSMUSG00000032397.8_64188885_64211901_1	chr9	+	1042	8	FSM	ENSMUSG00000032397.8	ENSMUST00000034964.7	1211	8	-4	173	0	-173	multi-exon	FALSE	canonical	3	540	junction_1	675.401679425976	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTTAGTAAGTCTGTT	9565	False	NA	21	True	AATACA	-24	NA	64188884	64211901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_64188935_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUSG00000032397.8_64188885_64211901_2	chr9	+	1036	8	FSM	ENSMUSG00000032397.8	ENSMUST00000216594.2	1841	8	0	805	0	-173	multi-exon	FALSE	canonical	3	410	junction_1	719.77354715471	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTTAGTAAGTCTGTT	9565	False	NA	21	True	AATACA	-24	NA	64188884	64211901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_64188935_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUSG00000032397.8_64188885_64211901_3	chr9	+	1037	8	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	0	-173	combination_of_known_junctions	FALSE	canonical	3	673	junction_1	630.170951862611	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTTAGTAAGTCTGTT	9565	False	NA	21	True	AATACA	-24	NA	64188884	64211901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUSG00000032397.8_64188885_64211901_4	chr9	+	1031	8	NIC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	0	-173	combination_of_known_junctions	FALSE	canonical	3	479	junction_1	696.204344855674	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTTAGTAAGTCTGTT	9565	False	NA	21	True	AATACA	-24	NA	64188884	64211901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_64188930_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUSG00000032397.8_64188885_64212076_1	chr9	+	1212	8	NIC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	673	junction_1	630.170951862611	7844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGGATTTGAGTTTCT	9565	False	NA	16	True	AATAAA	-16	NA	64188884	64212076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUSG00000032397.8_64188885_64212076_2	chr9	+	1211	8	FSM	ENSMUSG00000032397.8	ENSMUST00000216594.2	1841	8	0	630	0	2	multi-exon	FALSE	canonical	3	410	junction_1	719.77354715471	7581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGGATTTGAGTTTCT	9565	False	NA	16	True	AATAAA	-16	NA	64188884	64212076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_64188935_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUSG00000032397.8_64188885_64212076_3	chr9	+	1206	8	NIC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	479	junction_1	696.204344855674	4131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGGATTTGAGTTTCT	9565	False	NA	16	True	AATAAA	-16	NA	64188884	64212076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_64188930_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUSG00000032398.8_64086556_64089351_1	chr9	+	606	3	NNC	ENSMUSG00000032398.8	novel	1228	3	NA	NA	0	-1063	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	231	5062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGCTGTTTTGAGGCT	1628	False	NA	NA	False	NA	NA	NA	64086555	64089351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_64086703_64087780_64087871_64088982
ENSMUSG00000032398.8_64086556_64089694_1	chr9	+	508	3	FSM	ENSMUSG00000032398.8	ENSMUST00000034965.8	1228	3	0	720	0	-720	multi-exon	FALSE	canonical	3	413	junction_2	26	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGAGTTTGGAGCCCCA	1628	False	NA	NA	False	NA	NA	NA	64086555	64089694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_64086703_64087780_64087871_64089423
ENSMUSG00000032398.8_64086556_64089943_1	chr9	+	721	4	NNC	ENSMUSG00000032398.8	novel	1228	3	NA	NA	0	-471	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	208.032582918051	1425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTGATTTTTTTCT	1628	False	NA	7	True	AATAAA	-3	NA	64086555	64089943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_64086703_64087780_64087871_64089423_64089499_64089534
ENSMUSG00000032398.8_64086556_64089943_2	chr9	+	757	3	FSM	ENSMUSG00000032398.8	ENSMUST00000034965.8	1228	3	0	471	0	-471	multi-exon	FALSE	canonical	3	413	junction_2	26	1442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTGATTTTTTTCT	1628	False	NA	7	True	AATAAA	-3	NA	64086555	64089943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_64086703_64087780_64087871_64089423
ENSMUSG00000032399.9_64080657_64085801_1	chr9	+	1391	10	FSM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	0	147	0	-147	multi-exon	FALSE	canonical	3	16882	junction_3	1427.06559842995	124023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080656	64085801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ENSMUSG00000032401.16_64044426_64080190_1	chr9	+	2879	20	NNC	ENSMUSG00000032401.16	novel	2171	14	NA	NA	15109	34790	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1096	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGCGCGCCCAGACAAT	NA	False	NA	NA	False	NA	NA	NA	64044425	64080190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64074552_64074671_64075894_64075947_64080099
ENSMUSG00000032401.16_64044426_64080190_2	chr9	+	2759	18	NNC	ENSMUSG00000032401.16	novel	2171	14	NA	NA	15109	34790	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGCGCGCCCAGACAAT	NA	False	NA	NA	False	NA	NA	NA	64044425	64080190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64057410_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ENSMUSG00000032401.16_64044426_64080190_3	chr9	+	2761	19	NIC	ENSMUSG00000032401.16	novel	2171	14	NA	NA	15109	34790	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGCGCGCCCAGACAAT	NA	False	NA	NA	False	NA	NA	NA	64044425	64080190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ENSMUSG00000032407.15_95343031_95393938_1	chr9	-	3409	27	FSM	ENSMUSG00000032407.15	ENSMUST00000078374.13	3520	27	111	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	216.387107234962	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGTTGTTTTTTTGCCC	8302	False	NA	-1	True	AATAAA	-17	NA	95393938	95343030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ENSMUSG00000032412.9_96214708_96246280_1	chr9	-	1779	7	FSM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	215	0	215	0	multi-exon	FALSE	canonical	3	621	junction_2	81.5754592727222	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAACACATGATGGAGT	NA	False	NA	-10	True	AATAAA	-41	NA	96246280	96214707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
ENSMUSG00000032412.9_96215097_96246280_1	chr9	-	1390	7	FSM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	215	389	215	-389	multi-exon	FALSE	canonical	3	621	junction_2	81.5754592727222	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCTTCTGCGCATGT	NA	False	NA	-6	True	AATAAA	-16	NA	96246280	96215096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
ENSMUSG00000032413.13_96461908_96513589_1	chr9	-	845	8	NNC	ENSMUSG00000032413.13	novel	5813	24	NA	NA	0	-7967	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	17.5324771524745	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTAGTCTTTTTTCATA	NA	False	NA	-4	True	AATAAA	-21	NA	96513589	96461907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_96462029_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
ENSMUSG00000032417.11_86454044_86456952_1	chr9	+	1220	3	FSM	ENSMUSG00000032417.11	ENSMUST00000185566.7	1054	3	0	-166	0	0	multi-exon	FALSE	canonical	3	38	junction_1	7	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTGTCTCAAGTCCAA	NA	False	NA	6	True	AATAAA	-19	NA	86454043	86456952	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_86454111_86454889_86455117_86456026
ENSMUSG00000032418.16_86463424_86469670_1	chr9	-	1760	3	NNC	ENSMUSG00000032418.16	novel	3288	14	NA	NA	31087	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_2	172.5	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTAAATGTCATTTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	86469670	86463423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_86464961_86469015_86469115_86469546
ENSMUSG00000032418.16_86463424_86577834_1	chr9	-	3116	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	172	0	172	0	multi-exon	TRUE	canonical	3	250	junction_5	30.9913139195733	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTAAATGTCATTTTTT	9782	False	NA	NA	False	ATTAAA	-20	NA	86577834	86463423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ENSMUSG00000032418.16_86464448_86469670_1	chr9	-	736	3	NNC	ENSMUSG00000032418.16	novel	1055	8	NA	NA	31087	291	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_2	172.5	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGCCTACAGTTCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	86469670	86464447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_86464961_86469015_86469115_86469546
ENSMUSG00000032418.16_86464448_86577834_1	chr9	-	2092	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	172	1024	172	291	multi-exon	FALSE	canonical	3	250	junction_5	30.9913139195733	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGCCTACAGTTCTTT	9782	False	NA	NA	False	AATAAA	-25	NA	86577834	86464447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ENSMUSG00000032418.16_86464907_86577834_1	chr9	-	1633	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	172	1483	172	-168	multi-exon	FALSE	canonical	3	250	junction_5	30.9913139195733	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGAAGAATTTGTCTC	9782	False	NA	NA	False	AAGAAA	-30	NA	86577834	86464906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ENSMUSG00000032423.13_88334490_88364249_1	chr9	-	3659	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	363	5428	0	0	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTTACTGGTATAGCT	NA	False	NA	-13	True	AATAAA	-19	NA	88364249	88334489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ENSMUSG00000032423.13_88335991_88364249_1	chr9	-	1998	11	FSM	ENSMUSG00000032423.13	ENSMUST00000174391.8	6257	11	52	4207	0	0	multi-exon	FALSE	canonical	3	68	junction_10	258.93213396564	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTAAGTAGATTTTTCC	NA	False	NA	-1	True	AATAAA	-28	NA	88364249	88335990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
ENSMUSG00000032423.13_88335991_88364249_2	chr9	-	2158	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	363	6929	0	0	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTAAGTAGATTTTTCC	NA	False	NA	-1	True	AATAAA	-28	NA	88364249	88335990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ENSMUSG00000032423.13_88337631_88364249_1	chr9	-	2585	11	FSM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	359	0	0	0	multi-exon	FALSE	canonical	3	754	junction_4	62.6802201655355	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTTACAATTCGTTTT	NA	False	NA	NA	False	AATAAA	-34	NA	88364249	88337630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ENSMUSG00000032425.16_88430138_88450904_1	chr9	+	1251	6	NIC	ENSMUSG00000032425.16	novel	3472	6	NA	NA	0	668	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	4.17612260356422	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGTGTATTGTAGAGC	NA	False	NA	NA	False	AATAGA	-21	NA	88430137	88450904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_88430562_88434714_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
ENSMUSG00000032431.7_114204218_114215345_1	chr9	-	1040	6	ISM	ENSMUSG00000032431.7	ENSMUST00000084881.5	1674	7	4398	16	4398	0	3prime_fragment	FALSE	canonical	3	526	junction_5	49.4101204208207	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAGAATTTCTTTGGT	NA	False	NA	NA	False	GATAAA	-4	NA	114215345	114204217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_114204651_114207107_114207192_114208977_114209124_114210653_114210783_114213763_114213936_114215269
ENSMUSG00000032436.18_114585904_114610917_1	chr9	-	1022	5	NNC	ENSMUSG00000032436.18	novel	993	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	605.54329944274	2149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCCTTATTGCATGAGA	NA	False	NA	-14	True	AATAAA	-16	NA	114610917	114585903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_114586389_114587872_114587955_114590974_114591074_114592286_114592461_114610735
ENSMUSG00000032458.7_98445784_98470435_1	chr9	+	3050	22	FSM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	0	0	0	0	multi-exon	TRUE	canonical	3	669	junction_10	53.4673910412871	1662	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTTGAGTTTCCTTCCT	NA	False	NA	19	True	CATAAA	-20	NA	98445783	98470435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ENSMUSG00000032459.10_98478351_98483713_1	chr9	-	1039	3	ISM	ENSMUSG00000032459.10	ENSMUST00000035034.10	1197	8	0	7568	0	-1122	5prime_fragment	FALSE	canonical	3	535	junction_1	10	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTTGTATTGGTCATGGA	NA	False	NA	NA	False	NA	NA	NA	98483713	98478350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_98479038_98480187_98480352_98483525
ENSMUSG00000032463.11_98868454_98884074_1	chr9	+	1048	6	FSM	ENSMUSG00000032463.11	ENSMUST00000112911.9	803	6	27	-272	0	0	multi-exon	FALSE	canonical	3	19	junction_1	126.927695953247	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGGTTTGGTTTCATG	3572	False	NA	9	True	AATAAA	-23	NA	98868453	98884074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_98868566_98872967_98873025_98874153_98874287_98874565_98874795_98881019_98881070_98883607
ENSMUSG00000032468.12_99362146_99450720_1	chr9	-	2694	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	232	1721	0	-1721	multi-exon	FALSE	canonical	3	93	junction_7	54.8151294142266	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACATAGATTTTCTTTAT	NA	False	NA	1	True	AGTAAA	-27	NA	99450720	99362145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ENSMUSG00000032468.12_99362146_99450954_1	chr9	-	2928	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	-2	1721	-2	-1721	multi-exon	FALSE	canonical	3	93	junction_7	54.8151294142266	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACATAGATTTTCTTTAT	NA	False	NA	1	True	AGTAAA	-27	NA	99450954	99362145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ENSMUSG00000032468.12_99400857_99450954_2	chr9	-	3072	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-252	0	-2	0	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTTATGTGTGTGATA	NA	False	NA	-1	True	AATAAA	-28	NA	99450954	99400856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ENSMUSG00000032468.12_99402030_99450720_2	chr9	-	1665	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-18	1173	0	-1173	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTTAGTGAGTGGT	NA	False	NA	0	True	AATAAA	-19	NA	99450720	99402029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ENSMUSG00000032469.13_99457881_99466261_1	chr9	+	1939	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	29	293	0	-293	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGACCATTTTTAAGAC	6435	False	NA	14	True	ATTAAA	-18	NA	99457880	99466261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
ENSMUSG00000032469.13_99457881_99466398_2	chr9	+	2076	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	29	156	0	-156	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTGGCTCTTGTATAT	6435	False	NA	NA	False	ATTAAA	-23	NA	99457880	99466398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
ENSMUSG00000032470.18_99270032_99318577_1	chr9	-	1285	6	FSM	ENSMUSG00000032470.18	ENSMUST00000035045.15	4701	6	857	2559	402	0	multi-exon	FALSE	canonical	3	447	junction_5	30.9644957976067	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTGGCGAAGCCCCAAG	4096	False	NA	28	True	ATTAAA	-15	NA	99318577	99270031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
ENSMUSG00000032475.16_100377056_100428175_1	chr9	-	1754	4	FSM	ENSMUSG00000032475.16	ENSMUST00000116522.8	4476	4	12	2710	0	0	multi-exon	FALSE	canonical	3	120	junction_2	6.34209919681348	423	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATATTGCATCTGT	NA	False	NA	-40	True	AATAAA	-18	NA	100428175	100377055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_100377725_100379310_100380024_100390481_100390726_100428047
ENSMUSG00000032478.15_109661855_109672024_1	chr9	+	907	5	NIC	ENSMUSG00000032478.15	novel	599	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	245.714646490599	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAGGCTGGCAGTACT	NA	False	NA	7	True	AATAAA	-14	NA	109661854	109672024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_109661957_109662263_109662364_109664385_109664483_109668675_109668779_109671519
ENSMUSG00000032478.15_109661855_109672024_2	chr9	+	1022	7	NNC	ENSMUSG00000032478.15	novel	930	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_2	213.241191038588	907	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAGGCTGGCAGTACT	NA	False	NA	7	True	AATAAA	-14	NA	109661854	109672024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_109661876_109662263_109662364_109664390_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ENSMUSG00000032478.15_109661855_109672024_3	chr9	+	826	5	NIC	ENSMUSG00000032478.15	novel	930	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	254.098775085595	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAGGCTGGCAGTACT	NA	False	NA	7	True	AATAAA	-14	NA	109661854	109672024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_109661876_109662263_109662364_109664385_109664483_109668675_109668779_109671519
ENSMUSG00000032478.15_109661855_109672024_4	chr9	+	1011	6	FSM	ENSMUSG00000032478.15	ENSMUST00000200091.5	715	6	1	-297	0	0	multi-exon	FALSE	canonical	3	47	junction_2	202.945707025303	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAGGCTGGCAGTACT	NA	False	NA	7	True	AATAAA	-14	NA	109661854	109672024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_109661957_109662263_109662364_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ENSMUSG00000032478.15_109661855_109672024_5	chr9	+	1085	7	NNC	ENSMUSG00000032478.15	novel	930	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	223.458733451068	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAGGCTGGCAGTACT	NA	False	NA	7	True	AATAAA	-14	NA	109661854	109672024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_109661876_109662263_109662364_109664327_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ENSMUSG00000032478.15_109661855_109672024_6	chr9	+	1166	7	NNC	ENSMUSG00000032478.15	novel	930	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	215.187321497651	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAGGCTGGCAGTACT	NA	False	NA	7	True	AATAAA	-14	NA	109661854	109672024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_109661957_109662263_109662364_109664327_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ENSMUSG00000032478.15_109661855_109672024_7	chr9	+	1108	7	FSM	ENSMUSG00000032478.15	ENSMUST00000200005.5	719	7	38	-427	0	0	multi-exon	FALSE	canonical	3	252	junction_1	126.972000413039	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAGGCTGGCAGTACT	NA	False	NA	7	True	AATAAA	-14	NA	109661854	109672024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_109661957_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ENSMUSG00000032478.15_109661855_109672184_1	chr9	+	1268	7	FSM	ENSMUSG00000032478.15	ENSMUST00000200005.5	719	7	38	-587	0	0	multi-exon	FALSE	canonical	3	252	junction_1	126.972000413039	1500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAAGTTCAGTGTAGAC	NA	False	NA	47	True	NA	NA	NA	109661854	109672184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_109661957_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ENSMUSG00000032479.16_109760868_109857193_2	chr9	+	916	6	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	120.044325147006	95989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTGGCTGGCTTTAG	NA	False	NA	NA	False	AAGAAA	-1	NA	109760867	109857193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109856966
ENSMUSG00000032479.16_109760868_109912241_1	chr9	+	4762	17	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_13	70.836712541944	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTGAAATGGCCTG	NA	False	NA	23	True	AATAAA	-15	NA	109760867	109912241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ENSMUSG00000032480.18_109913391_109946479_1	chr9	-	4019	23	FSM	ENSMUSG00000032480.18	ENSMUST00000197928.5	4441	23	419	3	0	0	multi-exon	FALSE	canonical	3	162	junction_20	135.338876788039	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946479	109913390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
ENSMUSG00000032480.18_109913391_109946479_2	chr9	-	4013	23	NNC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_21	156.078578694428	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946479	109913390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944224_109944558_109944651_109946425
ENSMUSG00000032485.15_110212652_110214018_1	chr9	+	898	5	ISM	ENSMUSG00000032485.15	ENSMUST00000098350.10	4227	23	50228	0	5291	0	3prime_fragment	FALSE	canonical	3	104	junction_1	15.0748134316813	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGGCTGAAGTTCTTGT	NA	False	NA	11	True	AATAAA	-23	NA	110212651	110214018	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ENSMUSG00000032491.15_110450203_110453499_1	chr9	-	2027	4	NIC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	0	0	intron_retention	TRUE	canonical	3	126	junction_2	1.88561808316413	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTTGGCTCCTTGGACC	8945	False	NA	-5	True	ATTAAA	-25	NA	110453499	110450202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_110450806_110450907_110451051_110451139_110452304_110453382
ENSMUSG00000032491.15_110450203_110453499_2	chr9	-	1055	5	NIC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	51.265851207212	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTTGGCTCCTTGGACC	8945	False	NA	-5	True	ATTAAA	-25	NA	110453499	110450202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_110450806_110450907_110451051_110451139_110451183_110452154_110452304_110453382
ENSMUSG00000032491.15_110450203_110453499_3	chr9	-	1301	5	NNC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	51.6786948364604	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTTGGCTCCTTGGACC	8945	False	NA	-5	True	ATTAAA	-25	NA	110453499	110450202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452403_110453382
ENSMUSG00000032494.13_110768671_110775162_1	chr9	-	319	2	NNC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_110768856_110775028
ENSMUSG00000032494.13_110768671_110775162_3	chr9	-	1743	7	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1696.49855093759	7072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_110769150_110769274_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ENSMUSG00000032494.13_110768671_110775162_4	chr9	-	2828	6	NNC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	1780.14781408736	2070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_110770848_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ENSMUSG00000032494.13_110768671_110775162_6	chr9	-	1863	6	NNC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1856.82875893282	11662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_110769888_110771396_110771507_110771597_110771708_110772219_110772322_110773258_110773312_110774891
ENSMUSG00000032494.13_110769459_110775162_1	chr9	-	1080	6	FSM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	64	788	0	-148	multi-exon	FALSE	canonical	3	3873	junction_3	373.6995584691	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATTCAGAGTAGCTGAA	NA	False	NA	NA	False	ATTAAA	-20	NA	110775162	110769458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ENSMUSG00000032495.9_110782239_110810924_1	chr9	+	1421	9	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-628	-2210	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	94.0634759085587	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAGCAGACGAATGCACA	NA	False	NA	NA	False	GATAAA	-17	NA	110782238	110810924	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_110782345_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ENSMUSG00000032495.9_110782239_110811316_1	chr9	+	1813	9	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-628	-1818	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	94.0634759085587	873	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110782238	110811316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_110782345_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ENSMUSG00000032495.9_110782867_110811316_1	chr9	+	1797	9	NIC	ENSMUSG00000032495.9	novel	666	5	NA	NA	0	-1818	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	99.4054198723591	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110782866	110811316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_110782957_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ENSMUSG00000032495.9_110789788_110811316_2	chr9	+	1485	6	NIC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-114	-1818	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	83.1033092000553	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110789787	110811316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_110790078_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ENSMUSG00000032495.9_110789902_110811316_1	chr9	+	1371	6	NIC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	0	-1818	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	83.1033092000553	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110789901	110811316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_110790078_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ENSMUSG00000032498.10_111057323_111100602_1	chr9	-	2492	19	NIC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	111.636756635522	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100602	111057322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ENSMUSG00000032498.10_111057323_111100602_2	chr9	-	2497	19	FSM	ENSMUSG00000032498.10	ENSMUST00000035079.10	2754	19	257	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	91.190277259512	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100602	111057322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ENSMUSG00000032500.11_111312815_111318186_1	chr9	+	841	3	NNC	ENSMUSG00000032500.11	novel	3005	5	NA	NA	44666	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	15	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCTTGTTCAATGGT	700	False	NA	NA	False	AATAAA	-20	NA	111312814	111318186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_111312894_111313984_111314153_111317592
ENSMUSG00000032504.16_113483540_113491482_1	chr9	-	1327	6	ISM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	45830	0	0	0	3prime_fragment	FALSE	canonical	3	268	junction_2	46.6793316147522	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGTTATGTTTTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	113491482	113483539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336
ENSMUSG00000032512.8_119723961_119754327_1	chr9	+	2503	19	FSM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	17	1325	0	-977	multi-exon	FALSE	canonical	3	235	junction_17	23.7904950415284	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGAGTTATTTTTAATG	NA	False	NA	NA	False	TATAAA	-23	NA	119723960	119754327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ENSMUSG00000032512.8_119723961_119754737_1	chr9	+	2913	19	FSM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	17	915	0	-567	multi-exon	FALSE	canonical	3	235	junction_17	23.7904950415284	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTTGATATTTATATT	NA	False	NA	4	True	AGTAAA	-16	NA	119723960	119754737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ENSMUSG00000032513.9_119755654_119766618_1	chr9	-	2562	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	13	1331	-2	-1331	multi-exon	FALSE	canonical	3	103	junction_5	11.0898320546346	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTAACTAAAGCTTT	NA	False	NA	0	True	AATAAA	-19	NA	119766618	119755653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ENSMUSG00000032515.9_119800229_119813742_1	chr9	-	2911	5	NIC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	4.71036092035419	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTCTTCTTGGTGAGG	NA	False	NA	2	True	AATAAA	-17	NA	119813742	119800228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813699
ENSMUSG00000032515.9_119800605_119813742_1	chr9	-	2535	5	NIC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-18	-374	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	4.71036092035419	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTATAAAGCCCCTCTG	NA	False	NA	NA	False	NA	NA	NA	119813742	119800604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813699
ENSMUSG00000032518.7_119956855_119960625_1	chr9	+	1028	7	FSM	ENSMUSG00000032518.7	ENSMUST00000035105.7	1938	7	100	810	0	0	multi-exon	FALSE	canonical	3	2998	junction_3	1065.2190176464	166230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119956854	119960625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ENSMUSG00000032518.7_119956855_119960625_2	chr9	+	1022	7	NNC	ENSMUSG00000032518.7	novel	1101	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1904.74457313543	153483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119956854	119960625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960071_119960232_119960465
ENSMUSG00000032527.14_100864085_100866647_1	chr9	-	997	2	ISM	ENSMUSG00000032527.14	ENSMUST00000149322.8	2188	14	50283	0	1015	0	3prime_fragment	FALSE	canonical	3	102	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTGTTGTTTTTTTAT	NA	False	NA	0	True	NA	NA	NA	100866647	100864084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_100864860_100866425
ENSMUSG00000032534.19_102503495_102511441_1	chr9	-	492	4	NNC	ENSMUSG00000032534.19	novel	519	4	NA	NA	-7708	-7429	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTCGCGGCGCTCTCAA	NA	False	NA	NA	False	NA	NA	NA	102511441	102503494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_102503546_102506690_102506777_102506961_102507088_102511212
ENSMUSG00000032540.17_122180797_122208890_1	chr9	+	1334	7	FSM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	124	1699	0	0	multi-exon	FALSE	canonical	3	74	junction_5	12.9925192151313	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATTGTGATTTTTCA	NA	False	NA	15	True	AATAAA	-20	NA	122180796	122208890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
ENSMUSG00000032540.17_122180854_122208890_1	chr9	+	1191	6	NIC	ENSMUSG00000032540.17	novel	1386	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	35.2363448728724	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATTGTGATTTTTCA	NA	False	NA	15	True	AATAAA	-20	NA	122180853	122208890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_122180905_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
ENSMUSG00000032540.17_122180854_122210589_1	chr9	+	2976	7	FSM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	181	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	12.9925192151313	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	4	True	AATAAA	-17	NA	122180853	122210589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
ENSMUSG00000032551.8_122776600_122780041_1	chr9	-	891	3	FSM	ENSMUSG00000032551.8	ENSMUST00000035154.4	3361	3	24	2446	0	0	multi-exon	FALSE	canonical	3	36	junction_2	10	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTAGTCACTGTTCT	NA	False	NA	NA	False	ATTAAA	-27	NA	122780041	122776599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_122777174_122777989_122778135_122779869
ENSMUSG00000032551.8_122776704_122780041_1	chr9	-	787	3	FSM	ENSMUSG00000032551.8	ENSMUST00000035154.4	3361	3	24	2550	0	-104	multi-exon	FALSE	canonical	3	36	junction_2	10	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCTTTGTCCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	122780041	122776703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_122777174_122777989_122778135_122779869
ENSMUSG00000032553.15_103066289_103079328_1	chr9	-	1754	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	97.1596624119289	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATTGAGTCAAATGAT	NA	False	NA	0	True	TATAAA	-31	NA	103079328	103066288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_103066696_103066939_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ENSMUSG00000032553.15_103066289_103079328_2	chr9	-	1852	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	97.1596624119289	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATTGAGTCAAATGAT	NA	False	NA	0	True	TATAAA	-31	NA	103079328	103066288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_103066696_103066841_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ENSMUSG00000032553.15_103066289_103079328_3	chr9	-	1850	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	97.1596624119289	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATTGAGTCAAATGAT	NA	False	NA	0	True	TATAAA	-31	NA	103079328	103066288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_103066653_103066800_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ENSMUSG00000032553.15_103066289_103079328_4	chr9	-	1850	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	97.1596624119289	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATTGAGTCAAATGAT	NA	False	NA	0	True	TATAAA	-31	NA	103079328	103066288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_103066745_103066892_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ENSMUSG00000032553.15_103066289_103079328_5	chr9	-	1851	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	97.1596624119289	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATTGAGTCAAATGAT	NA	False	NA	0	True	TATAAA	-31	NA	103079328	103066288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_103066677_103066823_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ENSMUSG00000032554.16_103085994_103107469_1	chr9	-	2397	17	FSM	ENSMUSG00000032554.16	ENSMUST00000035158.16	2571	17	174	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	9.88982273602515	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTCCTGAGCTCAAG	NA	False	NA	73	True	TATAAA	-6	NA	103107469	103085993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_103086278_103087693_103087878_103089010_103089196_103092391_103092457_103093012_103093143_103094561_103094733_103096421_103096455_103097000_103097092_103098091_103098244_103099249_103099428_103100133_103100313_103100782_103100839_103102241_103102375_103103159_103103337_103104036_103104146_103105094_103105268_103107372
ENSMUSG00000032555.11_103205773_103227627_1	chr9	+	2651	15	ISM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	23359	0	738	0	3prime_fragment	FALSE	canonical	3	480	junction_2	66.6094312130843	468	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	NA	False	NA	14	True	AATAAA	-19	NA	103205772	103227627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ENSMUSG00000032557.14_103923798_103940284_1	chr9	-	2224	14	NNC	ENSMUSG00000032557.14	novel	2404	12	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	152.222586945339	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCTTTGAGATTCTAG	NA	False	NA	-13	True	AATAAA	-18	NA	103940284	103923797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_103924188_103924254_103924366_103924429_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
ENSMUSG00000032557.14_103924713_103940284_1	chr9	-	1440	12	FSM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	49	915	-22	136	multi-exon	FALSE	canonical	3	388	junction_1	40.2171790110061	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCATGTGTATCTTCAC	NA	False	NA	-35	True	AATAAA	-17	NA	103940284	103924712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
ENSMUSG00000032562.14_107491324_107512511_1	chr9	-	2160	9	FSM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	55	0	0	0	multi-exon	FALSE	canonical	3	1026	junction_1	123.439193026364	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTTCTTTTCTCCT	4825	False	NA	0	True	AATAAA	-24	NA	107512511	107491323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ENSMUSG00000032571.15_105520207_105564848_1	chr9	+	4865	20	FSM	ENSMUSG00000032571.15	ENSMUST00000065778.13	4711	20	-162	8	0	0	multi-exon	FALSE	canonical	3	108	junction_1	21.4158146964708	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGAGTTGGGATTTTT	NA	False	NA	24	True	AGTAAA	-15	NA	105520206	105564848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ENSMUSG00000032575.17_106746397_106769137_1	chr9	-	629	5	NIC	ENSMUSG00000032575.17	novel	357	3	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	394.142344210819	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGGGAAAATGATCAATT	NA	False	NA	NA	False	AATAAA	-40	NA	106769137	106746396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_106746561_106747401_106747472_106767359_106767502_106768269_106768398_106769012
ENSMUSG00000032575.17_106765952_106769137_1	chr9	-	868	4	FSM	ENSMUSG00000032575.17	ENSMUST00000159283.8	2247	4	41	1338	-21	0	multi-exon	FALSE	canonical	3	771	junction_3	24.1660919471891	1943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCACAGTATTCTGTCC	NA	False	NA	-11	True	ATTAAA	-24	NA	106769137	106765951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_106766425_106767359_106767502_106768269_106768398_106769012
ENSMUSG00000032575.17_106765952_106769137_2	chr9	-	862	4	NNC	ENSMUSG00000032575.17	novel	2247	4	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	387.030862966881	1857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCACAGTATTCTGTCC	NA	False	NA	-11	True	ATTAAA	-24	NA	106769137	106765951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_106766425_106767359_106767502_106768269_106768398_106769018
ENSMUSG00000032577.17_107132134_107166987_1	chr9	-	2680	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	-9	0	at_least_one_novel_splicesite	TRUE	canonical	3	142	junction_1	26.8365114556165	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATGATTCCTGGGTTT	NA	False	NA	-10	True	AATAAA	-16	NA	107166987	107132133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_107132548_107132586_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
ENSMUSG00000032578.8_107173909_107179161_1	chr9	+	2141	3	FSM	ENSMUSG00000032578.8	ENSMUST00000085102.6	2850	3	684	25	0	19	multi-exon	FALSE	canonical	1	4	junction_1	1	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCCTTCAGTGGGGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	107173908	107179161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107174234_107177122_107177344_107177566
ENSMUSG00000032579.15_107204909_107215532_1	chr9	-	1171	10	NIC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	55.2618905142583	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAATGGTGAGCCAGTA	NA	False	NA	-30	True	AGTAAA	-13	NA	107215532	107204908	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107215479
ENSMUSG00000032579.15_107204909_107215532_2	chr9	-	1549	11	FSM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	17	626	-1	0	multi-exon	FALSE	canonical	3	133	junction_9	21.6296093353532	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAATGGTGAGCCAGTA	NA	False	NA	-30	True	AGTAAA	-13	NA	107215532	107204908	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215479
ENSMUSG00000032582.15_107650758_107749932_1	chr9	-	3903	21	FSM	ENSMUSG00000032582.15	ENSMUST00000035201.13	3999	21	96	0	0	0	multi-exon	FALSE	canonical	3	99	junction_19	75.7708882091269	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7601	False	NA	NA	False	AATAAA	-22	NA	107749932	107650757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
ENSMUSG00000032586.10_107828166_107848729_1	chr9	+	2553	14	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	5	intron_retention	FALSE	canonical	3	271	junction_2	36.9687217865663	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGCTGTATAAATTT	NA	False	NA	18	True	AATAAA	-19	NA	107828165	107848729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ENSMUSG00000032586.10_107828166_107848729_2	chr9	+	1950	15	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	90.0234946657634	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGCTGTATAAATTT	NA	False	NA	18	True	AATAAA	-19	NA	107828165	107848729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845797_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ENSMUSG00000032590.15_107962612_107971675_1	chr9	-	2261	21	NIC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_19	42.4109360896456	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTGTGCTGGTACTT	NA	False	NA	-32	True	AATAAA	-14	NA	107971675	107962611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107971425_107971559_107971633
ENSMUSG00000032598.9_108685620_108695652_1	chr9	+	2916	13	FSM	ENSMUSG00000032598.9	ENSMUST00000035218.9	3360	13	53	391	0	-391	multi-exon	FALSE	canonical	3	52	junction_4	11.5551215196264	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTCCCTGTATGAT	3203	False	NA	5	True	AATAAA	-16	NA	108685619	108695652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ENSMUSG00000032599.13_108661021_108674892_1	chr9	+	1679	2	FSM	ENSMUSG00000032599.13	ENSMUST00000193634.2	2820	2	0	1141	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGGCTCACCCACCATG	NA	False	NA	9	True	AATAAA	-23	NA	108661020	108674892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108661070_108673262
ENSMUSG00000032599.13_108661021_108674892_3	chr9	+	998	4	FSM	ENSMUSG00000032599.13	ENSMUST00000192226.6	607	4	-43	-348	0	0	multi-exon	FALSE	canonical	3	46	junction_3	30.6847772609735	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGGCTCACCCACCATG	NA	False	NA	9	True	AATAAA	-23	NA	108661020	108674892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108661070_108673262_108673596_108673853_108673983_108674405
ENSMUSG00000032599.13_108661021_108675193_1	chr9	+	1980	2	FSM	ENSMUSG00000032599.13	ENSMUST00000193634.2	2820	2	0	840	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGTAGTTCTTTGG	NA	False	NA	NA	False	AATAAA	-21	NA	108661020	108675193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108661070_108673262
ENSMUSG00000032599.13_108661021_108675193_3	chr9	+	1299	4	FSM	ENSMUSG00000032599.13	ENSMUST00000192226.6	607	4	-43	-649	0	0	multi-exon	FALSE	canonical	3	46	junction_3	30.6847772609735	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGTAGTTCTTTGG	NA	False	NA	NA	False	AATAAA	-21	NA	108661020	108675193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108661070_108673262_108673596_108673853_108673983_108674405
ENSMUSG00000032599.13_108661021_108683532_1	chr9	+	1752	6	NIC	ENSMUSG00000032599.13	novel	1708	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	35.9243649909083	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGCTGCTGTCGTTCT	NA	False	NA	15	True	AATACA	-19	NA	108661020	108683532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_108661070_108673262_108673596_108675469_108675693_108676440_108676617_108681740_108681917_108682737
ENSMUSG00000032602.7_108539297_108561335_1	chr9	+	1278	9	FSM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	0	505	0	-505	multi-exon	FALSE	canonical	3	619	junction_8	102.171118717571	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGGCCAAATTGCCA	5077	False	NA	29	True	AATAAA	-17	NA	108539296	108561335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
ENSMUSG00000032604.17_108385258_108393135_2	chr9	+	2433	24	NNC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.083646738761	3370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	13	True	AATAAA	-16	NA	108385257	108393135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_108385399_108385590_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ENSMUSG00000032604.17_108385258_108393135_3	chr9	+	2435	24	NNC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	115.262550624908	3060	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	13	True	AATAAA	-16	NA	108385257	108393135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392172_108392233_108392305_108392432_108392994
ENSMUSG00000032604.17_108385258_108393135_4	chr9	+	2515	23	NIC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	468	junction_2	38.846487444515	3006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	13	True	AATAAA	-16	NA	108385257	108393135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392432_108392994
ENSMUSG00000032606.8_108167643_108172543_1	chr9	+	964	6	FSM	ENSMUSG00000032606.8	ENSMUST00000035227.8	2133	6	15	1154	0	564	multi-exon	FALSE	canonical	3	101	junction_5	4.63033476111609	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGAGCTCCTCTTGCTT	NA	False	NA	NA	False	NA	NA	NA	108167642	108172543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108167862_108170534_108170712_108171129_108171244_108171644_108171717_108172087_108172193_108172266
ENSMUSG00000032607.13_108174121_108179501_1	chr9	+	2003	10	NNC	ENSMUSG00000032607.13	novel	2082	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	61.6044731420626	2372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTCTAGCTTCCTTG	NA	False	NA	21	True	AATAAA	-22	NA	108174120	108179501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_108174225_108174326_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518_108178894_108178920
ENSMUSG00000032607.13_108174121_108179501_2	chr9	+	2009	10	NNC	ENSMUSG00000032607.13	novel	2082	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	61.6044731420626	2374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTCTAGCTTCCTTG	NA	False	NA	21	True	AATAAA	-22	NA	108174120	108179501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_108174225_108174326_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518_108178890_108178910
ENSMUSG00000032612.15_108225096_108269461_1	chr9	+	3335	22	FSM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	44	283	0	3	multi-exon	FALSE	canonical	3	580	junction_19	65.884562002066	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTGTCCTCTAGTT	NA	False	NA	13	True	AGTAAA	-17	NA	108225095	108269461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ENSMUSG00000032615.15_59708621_59730638_1	chr11	+	777	7	Fusion	ENSMUSG00000087249.2_ENSMUSG00000032615.15	novel	1316	5	NA	NA	7715	21321	multi-exon	FALSE	non_canonical	0	0	junction_1	0	115	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTGGAGGCAGGTTGT	2251	False	NA	NA	False	AAAAAG	-36	NA	59708620	59730638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr11_+_59708777_59718759_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ENSMUSG00000032621.9_103879698_103911114_1	chr13	-	2354	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	2	1578	0	421	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTGATGATGTGCTT	9994	False	NA	NA	False	AATATA	-1	NA	103911114	103879697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ENSMUSG00000032621.9_103880119_103911114_1	chr13	-	1933	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	2	1999	0	0	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAACCAAATGAGGAGAGC	9994	False	NA	NA	False	NA	NA	NA	103911114	103880118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ENSMUSG00000032623.10_121026790_121059715_1	chr5	+	2023	7	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25809	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	52.429052590673	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATTAATTTATTCTCCC	NA	False	NA	19	True	ATTAAA	-25	NA	121026789	121059715	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_121026866_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ENSMUSG00000032637.16_126092939_126101586_1	chr7	-	2377	19	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	0	-804	combination_of_known_junctions	FALSE	canonical	3	238	junction_18	194.521889339217	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGGTGAGTTGTGGTGC	6928	False	NA	NA	False	NA	NA	NA	126101586	126092938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ENSMUSG00000032641.19_134846120_134864807_1	chr6	-	1587	3	NIC	ENSMUSG00000032641.19	novel	1647	3	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	15	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAATTGATTTACTTAG	NA	False	NA	-18	True	ATTAAA	-17	NA	134864807	134846119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_134847446_134863853_134863900_134864592
ENSMUSG00000032641.19_134846120_134874861_1	chr6	-	1562	4	NIC	ENSMUSG00000032641.19	novel	1711	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	8.64098759787715	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAATTGATTTACTTAG	NA	False	NA	-18	True	ATTAAA	-17	NA	134874861	134846119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_134847407_134864592_134864749_134874124_134874177_134874794
ENSMUSG00000032679.13_103926185_103944659_1	chr2	+	612	4	FSM	ENSMUSG00000032679.13	ENSMUST00000040423.12	1691	4	39	1040	0	51	multi-exon	FALSE	canonical	3	158	junction_1	38.5082963644055	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGGAGGAGTTTAAGC	NA	False	NA	3	True	AATAAA	-21	NA	103926184	103944659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319
ENSMUSG00000032679.13_103926185_103945699_1	chr2	+	1626	5	NNC	ENSMUSG00000032679.13	novel	681	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	91.3218894898698	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTATCTTGACTCTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	103926184	103945699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319_103945326_103945351
ENSMUSG00000032679.13_103927275_103944425_2	chr2	+	397	4	NNC	ENSMUSG00000032679.13	novel	1806	5	NA	NA	1090	-183	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	102.022873252358	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGTAACAAAAGTGACG	NA	False	NA	NA	False	ATTAAA	-22	NA	103927274	103944425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_103927382_103934515_103934595_103941084_103941190_103944319
ENSMUSG00000032705.10_80509994_80544896_1	chr12	+	3185	9	FSM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	125	0	0	0	multi-exon	FALSE	canonical	3	165	junction_6	24.0724816959116	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	2788	False	NA	22	True	AATAAA	-19	NA	80509993	80544896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUSG00000032712.17_149230336_149237156_1	chr6	+	2095	3	ISM	ENSMUSG00000032712.17	ENSMUST00000046689.13	6066	5	19410	5	3380	0	3prime_fragment	FALSE	canonical	3	234	junction_2	22	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	7	True	AATAAA	-19	NA	149230335	149237156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_149231283_149232923_149233005_149236089
ENSMUSG00000032715.10_152179342_152185890_2	chr2	-	1125	3	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	463	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	False	NA	-4	True	AATAAA	-29	NA	152185890	152179341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_152180180_152185074_152185248_152185776
ENSMUSG00000032715.10_152179342_152185919_1	chr2	-	1100	5	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	404.200445323852	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	False	NA	-4	True	AATAAA	-29	NA	152185919	152179341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_152179678_152180570_152180608_152181634_152181928_152184956_152185248_152185776
ENSMUSG00000032715.10_152179342_152185919_2	chr2	-	1122	3	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	463	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	False	NA	-4	True	AATAAA	-29	NA	152185919	152179341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_152180169_152185095_152185248_152185776
ENSMUSG00000032715.10_152179342_152185919_3	chr2	-	912	4	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	437.466443157517	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	False	NA	-4	True	AATAAA	-29	NA	152185919	152179341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_152179701_152181808_152181928_152184956_152185248_152185776
ENSMUSG00000032715.10_152179342_152185919_4	chr2	-	1804	4	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	437.996448488899	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	False	NA	-4	True	AATAAA	-29	NA	152185919	152179341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_152180608_152181634_152181928_152185145_152185248_152185776
ENSMUSG00000032715.10_152179342_152185919_5	chr2	-	1079	4	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	437.466443157517	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	False	NA	-4	True	AATAAA	-29	NA	152185919	152179341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_152179688_152181628_152181928_152184956_152185248_152185776
ENSMUSG00000032715.10_152179342_152185980_1	chr2	-	1191	3	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	463	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	False	NA	-4	True	AATAAA	-29	NA	152185980	152179341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_152180180_152185098_152185248_152185776
ENSMUSG00000032715.10_152179342_152185980_2	chr2	-	1115	4	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	437.466443157517	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	False	NA	-4	True	AATAAA	-29	NA	152185980	152179341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_152179663_152181628_152181928_152184956_152185248_152185776
ENSMUSG00000032715.10_152179342_152185980_3	chr2	-	1215	3	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	463	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	False	NA	-4	True	AATAAA	-29	NA	152185980	152179341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_152180180_152185074_152185248_152185776
ENSMUSG00000032745.19_111562214_111626378_1	chr13	-	3427	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	267	0	184	0	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTCTTTGTAGTG	NA	False	NA	-4	True	AATAAA	-15	NA	111626378	111562213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ENSMUSG00000032745.19_111562214_111626378_2	chr13	-	3367	12	FSM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	184	-252	184	0	multi-exon	FALSE	canonical	3	389	junction_6	235.263031976713	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTCTTTGTAGTG	NA	False	NA	-4	True	AATAAA	-15	NA	111626378	111562213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ENSMUSG00000032745.19_111562692_111626378_1	chr13	-	2949	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	267	478	184	0	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626378	111562691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ENSMUSG00000032745.19_111562692_111626378_2	chr13	-	2889	12	FSM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	184	226	184	0	multi-exon	FALSE	canonical	3	389	junction_6	235.263031976713	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626378	111562691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ENSMUSG00000032745.19_111562692_111626562_1	chr13	-	3133	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	83	478	0	0	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626562	111562691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ENSMUSG00000032754.15_120649233_120672089_1	chr5	+	2565	13	NIC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	57.0079794609686	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	-4	True	NA	6	True	AATAAA	-22	NA	120649232	120672089	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ENSMUSG00000032763.12_78410334_78420336_1	chr10	+	2232	16	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	41.9345521815444	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATACTGGTTTATT	5399	False	NA	30	True	AATAAA	-39	NA	78410333	78420336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_78410403_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ENSMUSG00000032777.10_125268843_125306862_1	chr7	-	2275	14	ISM	ENSMUSG00000032777.10	ENSMUST00000205697.2	4066	23	70	7713	-13	-2028	5prime_fragment	FALSE	canonical	3	171	junction_11	20.2478722674988	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCCTCGAAGCCAGAAAG	NA	False	NA	NA	False	NA	NA	NA	125306862	125268842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
ENSMUSG00000032788.16_78276433_78300809_1	chr10	-	1264	11	NNC	ENSMUSG00000032788.16	novel	5124	11	NA	NA	0	-3855	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	106.050931160457	743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGATTCACAACCATGG	6802	False	NA	3	True	TTTAAA	-24	NA	78300809	78276432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286121_78286201_78287312_78287418_78289307_78289363_78300594
ENSMUSG00000032788.16_78276433_78300809_2	chr10	-	1269	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	0	3855	0	-3855	multi-exon	FALSE	canonical	3	285	junction_4	40.3910881259715	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGATTCACAACCATGG	6802	False	NA	3	True	TTTAAA	-24	NA	78300809	78276432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
ENSMUSG00000032802.9_151947650_151953296_1	chr2	+	2397	2	FSM	ENSMUSG00000032802.9	ENSMUST00000137751.2	446	2	214	-2165	206	0	multi-exon	FALSE	canonical	3	20	junction_1	0	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAACAGTTTTGGTTGTG	NA	False	NA	31	True	NA	NA	NA	151947649	151953296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151947659_151950908
ENSMUSG00000032806.14_73412823_73416824_1	chrX	-	1892	3	FSM	ENSMUSG00000032806.14	ENSMUST00000037967.6	2023	3	131	0	28	0	multi-exon	FALSE	canonical	3	11	junction_2	8.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCTCGGGTCCCTTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	73416824	73412822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_73414618_73416219_73416289_73416796
ENSMUSG00000032812.19_101043575_101061101_1	chr7	+	3001	21	FSM	ENSMUSG00000032812.19	ENSMUST00000098243.4	3693	21	0	692	0	0	multi-exon	FALSE	canonical	3	23	junction_1	25.1838738084513	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATG	NA	False	NA	18	True	TATAAA	-23	NA	101043574	101061101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_101043675_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ENSMUSG00000032834.12_78007429_78020983_1	chr10	-	3186	21	FSM	ENSMUSG00000032834.12	ENSMUST00000042556.11	3872	21	0	686	0	-686	multi-exon	FALSE	canonical	3	184	junction_16	14.9260678009984	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTTTCCGGTGTTTC	NA	False	NA	-21	True	NA	NA	NA	78020983	78007428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
ENSMUSG00000032840.8_118383292_118401177_1	chr5	+	2532	6	NNC	ENSMUSG00000032840.8	novel	5649	5	NA	NA	0	-2981	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	73.3255753472143	460	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTGTGGAATGTGG	1639	False	NA	7	True	NA	NA	NA	118383291	118401177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164_118399994_118400129
ENSMUSG00000032869.16_151558663_151583213_1	chr2	-	2861	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	17	931	0	-681	multi-exon	FALSE	canonical	3	320	junction_3	11.5385826204473	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAATAGCTTTATT	NA	False	NA	-2	True	AATAAA	-18	NA	151583213	151558662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
ENSMUSG00000032869.16_151560185_151583213_1	chr2	-	1339	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	17	2453	0	0	multi-exon	FALSE	canonical	3	320	junction_3	11.5385826204473	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCCACGCTCCTTTTT	NA	False	NA	-28	True	AATACA	-15	NA	151583213	151560184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
ENSMUSG00000032869.16_151560185_151583213_2	chr2	-	1220	8	NNC	ENSMUSG00000032869.16	novel	1384	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	118.814896338114	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCCACGCTCCTTTTT	NA	False	NA	-28	True	AATACA	-15	NA	151583213	151560184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930_151583075_151583193
ENSMUSG00000032872.17_86904140_86959061_1	chr9	+	1805	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	73	766	0	-373	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTCTTGGTTTAATTT	NA	False	NA	12	True	AATGAA	-21	NA	86904139	86959061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ENSMUSG00000032872.17_86904140_86959317_2	chr9	+	2061	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	73	510	0	-117	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGAATTGATGGTGTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	86904139	86959317	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ENSMUSG00000032872.17_86904140_86959434_1	chr9	+	2169	15	NNC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	233.27500850249	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGGTGGACGTGTG	NA	False	NA	11	True	AATAAA	-22	NA	86904139	86959434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914533_86922431_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ENSMUSG00000032872.17_86904140_86959434_2	chr9	+	2178	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	73	393	0	0	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGGTGGACGTGTG	NA	False	NA	11	True	AATAAA	-22	NA	86904139	86959434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ENSMUSG00000032892.15_68863310_68864681_1	chr11	-	811	5	NIC	ENSMUSG00000032892.15	novel	820	5	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	253.801472611961	2535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCCTTCAAATCTA	7224	False	NA	-2	True	AATAAA	-22	NA	68864681	68863309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_68863568_68863768_68863855_68863963_68864100_68864266_68864384_68864467
ENSMUSG00000032892.15_68863310_68864681_2	chr11	-	999	4	NIC	ENSMUSG00000032892.15	novel	820	5	NA	NA	-12	0	intron_retention	FALSE	canonical	3	482	junction_2	50.8876758710354	2383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCCTTCAAATCTA	7224	False	NA	-2	True	AATAAA	-22	NA	68864681	68863309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_68863568_68863768_68863855_68863942_68864384_68864467
ENSMUSG00000032897.18_120614635_120682895_1	chr4	-	1852	9	NIC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	28	junction_7	133.008399640775	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	-1	True	AATAAA	-20	NA	120682895	120614634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120647573_120647687_120682726
ENSMUSG00000032897.18_120614635_120682895_2	chr4	-	1738	8	NIC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	146.72367475869	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	-1	True	AATAAA	-20	NA	120682895	120614634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120647573_120647687_120682726
ENSMUSG00000032897.18_120615151_120682895_1	chr4	-	1408	10	FSM	ENSMUSG00000032897.18	ENSMUST00000043429.12	1932	10	8	516	-2	0	multi-exon	FALSE	canonical	3	393	junction_8	23.5424491839793	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAATATTTTGAGCTAT	NA	False	NA	NA	False	NA	NA	NA	120682895	120615150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
ENSMUSG00000032898.10_118138459_118146756_1	chr5	+	975	3	ISM	ENSMUSG00000032898.10	ENSMUST00000201611.2	1878	11	23423	-129	21070	129	3prime_fragment	FALSE	canonical	3	438	junction_1	4.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTTTTTGTTGTTGT	NA	False	NA	28	True	AATACA	-20	NA	118138458	118146756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_118138594_118140079_118140238_118146074
ENSMUSG00000032932.16_75552078_75563673_1	chr16	-	4033	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	36	168	-3	-168	multi-exon	FALSE	canonical	3	50	junction_2	5.78791845139511	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTTTCTATCTTAAGA	4017	False	NA	2	True	AATAAA	-25	NA	75563673	75552077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
ENSMUSG00000032932.16_75553907_75563673_1	chr16	-	2204	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	36	1997	-3	-379	multi-exon	FALSE	canonical	3	50	junction_2	5.78791845139511	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTGTTTTTGCTATCC	4017	False	NA	NA	False	AATAAA	-15	NA	75563673	75553906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
ENSMUSG00000032936.14_107813097_107826882_1	chr9	+	3045	11	FSM	ENSMUSG00000032936.14	ENSMUST00000035700.14	3277	11	224	8	0	0	multi-exon	FALSE	canonical	3	33	junction_4	7.3729234364667	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTTGCCTT	NA	False	NA	10	True	AATAAA	-18	NA	107813096	107826882	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
ENSMUSG00000032939.15_94941205_95041488_1	chr8	+	2688	22	NNC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_18	250.292708462107	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	94941204	95041488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036221_95036334_95036926_95037011_95038160_95038290_95041212
ENSMUSG00000032939.15_94941205_95041488_2	chr8	+	2699	22	NNC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	246.553366146716	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	94941204	95041488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_94941265_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ENSMUSG00000032946.17_6457172_6465256_1	chr19	+	1150	9	ISM	ENSMUSG00000032946.17	ENSMUST00000167240.8	2192	17	6559	-11	-1263	10	3prime_fragment	FALSE	canonical	3	20	junction_1	64.9576785299475	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCTGATGCTGTACTTC	NA	False	NA	35	True	AATAAA	-37	NA	6457171	6465256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_+_6457353_6458200_6458279_6458477_6458601_6458868_6458985_6463114_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
ENSMUSG00000032946.17_6463113_6465243_1	chr19	+	641	5	ISM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	4678	-2	4678	2	3prime_fragment	FALSE	canonical	3	149	junction_1	9.57535900110278	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAGCCTAAAACCCTCT	NA	False	NA	22	True	AATAAA	-24	NA	6463112	6465243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_+_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
ENSMUSG00000032946.17_6463113_6465243_2	chr19	+	842	4	NIC	ENSMUSG00000032946.17	novel	919	7	NA	NA	4678	2	intron_retention	FALSE	canonical	3	164	junction_1	5.65685424949238	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAGCCTAAAACCCTCT	NA	False	NA	22	True	AATAAA	-24	NA	6463112	6465243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_6463495_6463894_6464072_6464821_6464885_6465023
ENSMUSG00000032952.12_103716916_103729341_1	chr3	+	2747	11	NNC	ENSMUSG00000032952.12	novel	2799	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.1099525101254	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCTGTCGTCACTT	NA	False	NA	17	True	ATTAAA	-21	NA	103716915	103729341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_103717104_103717183_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
ENSMUSG00000032965.12_49519596_49584480_1	chr16	+	1592	11	FSM	ENSMUSG00000032965.12	ENSMUST00000046777.11	2601	11	0	1009	0	0	multi-exon	FALSE	canonical	3	141	junction_7	10.0915806492343	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTCAGAGAAGTGTTC	NA	False	NA	18	True	AATAAA	-14	NA	49519595	49584480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_49519913_49522216_49522380_49523512_49523632_49526453_49526545_49532201_49532271_49557034_49557158_49578757_49578830_49579679_49579812_49581316_49581380_49582963_49583031_49584104
ENSMUSG00000032966.15_151384505_151402748_1	chr2	+	692	5	FSM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	102	864	0	0	multi-exon	FALSE	canonical	3	2063	junction_1	209.807501057517	1455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGGGTGAAGACTCAGT	NA	False	NA	9	True	CATAAA	-16	NA	151384504	151402748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
ENSMUSG00000032966.15_151384505_151403611_1	chr2	+	1555	5	FSM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	102	1	0	-1	multi-exon	FALSE	canonical	3	2063	junction_1	209.807501057517	4873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGAGGTTG	NA	False	NA	24	True	AATAAA	-25	NA	151384504	151403611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
ENSMUSG00000032977.10_77323999_77351631_1	chr10	-	902	6	FSM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	-12	1504	-12	0	multi-exon	FALSE	canonical	3	238	junction_3	11.7881296226331	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCTGTGGCTTTACTTC	NA	False	NA	-3	True	AATAAA	-35	NA	77351631	77323998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679_77339749_77350139_77350249_77351436
ENSMUSG00000033020.8_79025551_79035967_1	chr15	+	231	3	NNC	ENSMUSG00000033020.8	novel	452	5	NA	NA	0	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1024.5	111	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTCCCCGTTACCTG	NA	False	NA	21	True	AATAAA	-15	NA	79025550	79035967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_79025635_79028793_79028835_79035861
ENSMUSG00000033020.8_79025551_79035967_2	chr15	+	335	3	NIC	ENSMUSG00000033020.8	novel	452	5	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1011.5	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTCCCCGTTACCTG	NA	False	NA	21	True	AATAAA	-15	NA	79025550	79035967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_79025635_79035535_79035608_79035788
ENSMUSG00000033020.8_79025551_79035967_3	chr15	+	531	5	NNC	ENSMUSG00000033020.8	novel	885	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	895.566685121772	10292	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTCCCCGTTACCTG	NA	False	NA	21	True	AATAAA	-15	NA	79025550	79035967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_79025635_79028793_79028864_79030252_79030384_79035540_79035608_79035788
ENSMUSG00000033020.8_79025551_79035967_4	chr15	+	526	5	NNC	ENSMUSG00000033020.8	novel	885	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	897.839907778664	9612	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTCCCCGTTACCTG	NA	False	NA	21	True	AATAAA	-15	NA	79025550	79035967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535_79035608_79035798
ENSMUSG00000033020.8_79025551_79035967_5	chr15	+	717	4	ISM	ENSMUSG00000033020.8	ENSMUST00000229973.2	414	5	-15	-173	0	3	intron_retention	FALSE	canonical	3	2040	junction_3	39.0640499692492	967	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTCCCCGTTACCTG	NA	False	NA	21	True	AATAAA	-15	NA	79025550	79035967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535
ENSMUSG00000033020.8_79025551_79035967_6	chr15	+	222	2	NNC	ENSMUSG00000033020.8	novel	452	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	119	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTCCCCGTTACCTG	NA	False	NA	21	True	AATAAA	-15	NA	79025550	79035967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_79025635_79035829
ENSMUSG00000033020.8_79025551_79035967_7	chr15	+	664	6	NNC	ENSMUSG00000033020.8	novel	885	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	1011.15783139923	2728	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTCCCCGTTACCTG	NA	False	NA	21	True	AATAAA	-15	NA	79025550	79035967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_79025635_79028793_79028864_79030252_79030384_79034986_79035115_79035535_79035608_79035788
ENSMUSG00000033020.8_79029951_79035965_1	chr15	+	469	4	NNC	ENSMUSG00000033020.8	novel	509	2	NA	NA	-4056	1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	952.498118983269	471	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCCCTCTCCCCGTTACC	632	False	NA	19	True	AATAAA	-13	NA	79029950	79035965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_79030040_79030252_79030384_79035535_79035608_79035788
ENSMUSG00000033021.17_75412612_75419818_1	chr1	+	1802	13	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	82	junction_1	58.385869199852	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCTTGGACTCCTACT	NA	False	NA	13	True	AATAAA	-17	NA	75412611	75419818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ENSMUSG00000033022.9_46846574_46849646_1	chr18	-	770	3	NNC	ENSMUSG00000033022.9	novel	1466	4	NA	NA	11450	-303	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	72.5	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCACGTGTCTGTTTTCA	NA	False	NA	-3	True	AGTAAA	-17	NA	46849646	46846573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_46847029_46848663_46848834_46849501
ENSMUSG00000033022.9_46846574_46861237_1	chr18	-	1056	5	FSM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	225	314	-141	-303	multi-exon	FALSE	canonical	3	151	junction_1	18.3166590840142	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCACGTGTCTGTTTTCA	2802	False	NA	-3	True	AGTAAA	-17	NA	46861237	46846573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_46847029_46848663_46848834_46853353_46853509_46856384_46856463_46861039
ENSMUSG00000033022.9_46846574_46861422_1	chr18	-	1241	5	FSM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	40	314	0	-303	multi-exon	FALSE	canonical	3	151	junction_1	18.3166590840142	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCACGTGTCTGTTTTCA	2617	False	NA	-3	True	AGTAAA	-17	NA	46861422	46846573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_46847029_46848663_46848834_46853353_46853509_46856384_46856463_46861039
ENSMUSG00000033032.16_61863332_61868990_1	chr18	-	1531	3	ISM	ENSMUSG00000033032.16	ENSMUST00000154876.8	2842	16	50692	0	50692	0	3prime_fragment	FALSE	canonical	3	21	junction_1	5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCAGAGGGTAGCTGGC	NA	False	NA	1	True	AATAAA	-21	NA	61868990	61863331	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_-_61864382_61866774_61866904_61868638
ENSMUSG00000033065.15_98018923_98030328_1	chr15	+	2459	18	ISM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	12576	-6	12576	0	3prime_fragment	FALSE	canonical	3	75	junction_7	12.0037479729426	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	NA	False	NA	7	True	AATAAA	-19	NA	98018922	98030328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ENSMUSG00000033068.17_150591001_150603713_1	chr2	+	1107	7	NNC	ENSMUSG00000033068.17	novel	2893	6	NA	NA	0	-1558	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	61.5729016875299	64	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTGGCTGCGATGTG	NA	False	NA	NA	False	AAAAAG	-14	NA	150591000	150603713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_150591154_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150603416
ENSMUSG00000033099.11_78819195_78825064_1	chr15	+	885	6	FSM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	62	2774	0	0	multi-exon	FALSE	canonical	3	420	junction_1	39.9929993873928	2186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTGTGCTTGTGCT	NA	False	NA	10	True	NA	NA	NA	78819194	78825064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_78819276_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
ENSMUSG00000033105.13_76367441_76389768_1	chr10	+	3122	22	FSM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	0	1545	0	701	multi-exon	FALSE	canonical	3	170	junction_9	27.7651309078683	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGCCTTCCTGAGACA	NA	False	NA	6	True	AATAAA	-14	NA	76367440	76389768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ENSMUSG00000033106.7_106927070_106937567_1	chr8	-	1622	4	NNC	ENSMUSG00000033106.7	novel	1246	5	NA	NA	0	279	intron_retention	FALSE	canonical	3	16	junction_2	53.0471488394994	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCAGTTCTTTTTTAGA	NA	False	NA	-2	True	AATAAA	-22	NA	106937567	106927069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_106927782_106928862_106928992_106930962_106931173_106936996
ENSMUSG00000033106.7_106927070_106937567_2	chr8	-	1527	5	FSM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	-2	-279	0	279	multi-exon	FALSE	canonical	3	127	junction_1	2.91547594742265	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCAGTTCTTTTTTAGA	NA	False	NA	-2	True	AATAAA	-22	NA	106937567	106927069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996_106937264_106937350
ENSMUSG00000033106.7_106927350_106937567_1	chr8	-	1342	4	NNC	ENSMUSG00000033106.7	novel	1246	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_2	53.0471488394994	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCCCTGGTGGTTTTTCT	NA	False	NA	-7	True	NA	NA	NA	106937567	106927349	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_106927782_106928862_106928992_106930962_106931173_106936996
ENSMUSG00000033107.7_21077682_21116653_1	chr18	+	1082	6	FSM	ENSMUSG00000033107.7	ENSMUST00000050004.3	1348	6	0	266	0	-128	multi-exon	FALSE	canonical	3	69	junction_1	22.5335305711289	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATTCTCATGCTCTAA	5341	False	NA	NA	False	ATTAAA	-17	NA	21077681	21116653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_21077815_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ENSMUSG00000033107.7_21077682_21120412_1	chr18	+	4841	6	FSM	ENSMUSG00000033107.7	ENSMUST00000050004.3	1348	6	0	-3493	0	3493	multi-exon	FALSE	canonical	3	69	junction_1	22.5335305711289	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGTGTCTATTTGG	5341	False	NA	NA	False	AATAAA	-30	NA	21077681	21120412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_21077815_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ENSMUSG00000033107.7_21094750_21116653_1	chr18	+	1057	6	FSM	ENSMUSG00000033107.7	ENSMUST00000234316.2	1406	6	221	128	221	-128	multi-exon	FALSE	canonical	3	78	junction_1	19.3349424617711	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATTCTCATGCTCTAA	1440	False	NA	NA	False	ATTAAA	-17	NA	21094749	21116653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_21094858_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ENSMUSG00000033107.7_21094750_21116783_1	chr18	+	1187	6	FSM	ENSMUSG00000033107.7	ENSMUST00000234316.2	1406	6	221	-2	221	2	multi-exon	FALSE	canonical	3	78	junction_1	19.3349424617711	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGCGTTTGAAGTGTAT	1440	False	NA	NA	False	AATATA	-13	NA	21094749	21116783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_21094858_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ENSMUSG00000033111.17_10167784_10185531_1	chr14	-	982	7	NIC	ENSMUSG00000033111.17	novel	900	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	65.3029265976818	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGCCCTCTTGAGTCTC	NA	False	NA	-8	True	AATAAA	-18	NA	10185531	10167783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_10168192_10168274_10168365_10168516_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185429
ENSMUSG00000033126.6_76297019_76304697_1	chr10	-	2653	5	FSM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	251	1618	0	-1618	multi-exon	FALSE	canonical	3	28	junction_2	3.63145976158349	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATGTATATGAGTACAC	NA	False	NA	NA	False	NA	NA	NA	76304697	76297018	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_76299154_76300090_76300160_76302070_76302200_76303990_76304221_76304607
ENSMUSG00000033126.6_76303944_76304697_1	chr10	-	367	2	ISM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	251	8543	0	-745	5prime_fragment	FALSE	canonical	3	38	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCTTCTCGTACAGCT	NA	False	NA	NA	False	NA	NA	NA	76304697	76303943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_76304221_76304607
ENSMUSG00000033157.18_45550088_45563276_1	chr16	-	1093	6	NNC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	119.092233164048	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATGGTGAGTCCTGTGC	NA	False	NA	-5	True	NA	NA	NA	45563276	45550087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_45550357_45552069_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
ENSMUSG00000033157.18_45551512_45563276_1	chr16	-	1382	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	42	1424	-6	402	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGCCATGCTATATTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	45563276	45551511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
ENSMUSG00000033157.18_45551657_45563276_1	chr16	-	1237	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	42	1569	-6	257	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTTGTCTGGTACCAT	NA	False	NA	-8	True	AATAAA	-13	NA	45563276	45551656	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
ENSMUSG00000033159.15_75112412_75119341_1	chr1	-	2514	9	FSM	ENSMUSG00000033159.15	ENSMUST00000168720.8	3669	9	-59	1214	0	0	multi-exon	TRUE	canonical	3	100	junction_8	23.1405353222435	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTTTTCCTTCTGT	9308	False	NA	-13	True	AATAAA	-17	NA	75119341	75112411	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75118701
ENSMUSG00000033159.15_75113226_75119341_1	chr1	-	1700	9	FSM	ENSMUSG00000033159.15	ENSMUST00000168720.8	3669	9	-59	2028	0	203	multi-exon	FALSE	canonical	3	100	junction_8	23.1405353222435	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCCTGCCACACTAACCA	9308	False	NA	NA	False	NA	NA	NA	75119341	75113225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75118701
ENSMUSG00000033186.10_99271636_99283572_1	chr14	-	2511	4	NNC	ENSMUSG00000033186.10	novel	2240	3	NA	NA	-2	344	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	385.421270242777	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGAGAGTCATAAAATTT	NA	False	NA	NA	False	GATAAA	-43	NA	99283572	99271635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_99271702_99271790_99273947_99277950_99278097_99283429
ENSMUSG00000033186.10_99271696_99283529_1	chr14	-	2438	4	NNC	ENSMUSG00000033186.10	novel	2240	3	NA	NA	0	284	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	385.421270242777	1587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGACAATTCAGATAAATA	NA	False	NA	NA	False	GATAAA	-2	NA	99283529	99271695	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_99271756_99271814_99273947_99277950_99278097_99283429
ENSMUSG00000033186.10_99271980_99283529_1	chr14	-	2194	3	FSM	ENSMUSG00000033186.10	ENSMUST00000227948.2	952	3	0	-1242	0	0	multi-exon	FALSE	canonical	3	18	junction_2	387	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGTCCTTTTGATATAC	NA	False	NA	NA	False	AATAAA	-18	NA	99283529	99271979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_99273947_99277950_99278097_99283448
ENSMUSG00000033213.17_122479835_122483005_1	chr2	+	621	5	FSM	ENSMUSG00000033213.17	ENSMUST00000047498.15	792	5	65	106	0	0	multi-exon	FALSE	canonical	3	117	junction_4	21.9146070008111	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATTTGTGCAAGAGATA	NA	False	NA	23	True	AATAAA	-25	NA	122479834	122483005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_122479862_122479991_122480054_122480176_122480263_122481135_122481197_122482620
ENSMUSG00000033213.17_122479835_122483005_2	chr2	+	665	3	FSM	ENSMUSG00000033213.17	ENSMUST00000175727.2	523	3	0	-142	0	0	multi-exon	FALSE	canonical	3	10	junction_1	53.5	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATTTGTGCAAGAGATA	NA	False	NA	23	True	AATAAA	-25	NA	122479834	122483005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_122480054_122481135_122481197_122482620
ENSMUSG00000033216.10_88234855_88423489_1	chr6	-	1448	6	NIC	ENSMUSG00000033216.10	novel	2208	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_2	158.228189650264	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTAGTGTGCCCATAGT	NA	False	NA	-17	True	AATAAA	-12	NA	88423489	88234854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_88235374_88258530_88258688_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ENSMUSG00000033216.10_88289555_88423489_1	chr6	-	1008	5	NNC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	-5	-14467	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	202.243664919324	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCAAGCCCCAGTATGAA	NA	False	NA	NA	False	AAAAAG	-3	NA	88423489	88289554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_88289791_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ENSMUSG00000033220.8_78445066_78456981_1	chr15	-	1337	7	FSM	ENSMUSG00000033220.8	ENSMUST00000043214.8	3038	7	2	1699	0	1029	multi-exon	FALSE	canonical	3	13	junction_3	5.64702478203247	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGATTCTTTTGGTGG	NA	False	NA	NA	False	NA	NA	NA	78456981	78445065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_78445686_78446105_78446239_78449062_78449223_78449640_78449704_78450113_78450232_78454931_78455004_78456810
ENSMUSG00000033228.9_96312453_96317587_1	chr15	-	2610	5	ISM	ENSMUSG00000033228.9	ENSMUST00000227069.2	4829	15	41118	0	-1014	0	3prime_fragment	FALSE	non_canonical	0	0	junction_2	104.145331148352	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTAATGGGATGTGCGT	NA	False	NA	-3	True	AATAAA	-22	NA	96317587	96312452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_96312798_96312912_96313031_96313657_96313829_96314729_96315071_96315952
ENSMUSG00000033255.9_75829643_75845425_1	chr10	+	1853	6	ISM	ENSMUSG00000033255.9	ENSMUST00000099577.4	2838	14	39295	0	19723	0	3prime_fragment	FALSE	canonical	2	3	junction_3	1.89736659610103	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCAGGTGTCTTGAAGTG	NA	False	NA	9	True	AATAAA	-22	NA	75829642	75845425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_75829767_75831613_75831765_75836222_75836392_75840528_75840745_75841823_75841927_75844335
ENSMUSG00000033272.13_36812632_36816399_1	chr18	+	1855	4	FSM	ENSMUSG00000033272.13	ENSMUST00000050476.11	2362	4	0	507	0	-507	multi-exon	TRUE	canonical	3	118	junction_3	140.362229804017	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTGTCCTTGAAGATCC	NA	False	NA	NA	False	NA	NA	NA	36812631	36816399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_36812677_36813568_36813668_36814580_36814819_36814926
ENSMUSG00000033272.13_36812632_36816399_2	chr18	+	1963	3	FSM	ENSMUSG00000033272.13	ENSMUST00000036158.7	2462	3	-13	512	0	-507	multi-exon	FALSE	canonical	3	269	junction_1	96	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTGTCCTTGAAGATCC	NA	False	NA	NA	False	NA	NA	NA	36812631	36816399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_36812677_36813568_36813668_36814580
ENSMUSG00000033272.13_36812632_36816914_2	chr18	+	2458	4	NIC	ENSMUSG00000033272.13	novel	2362	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	190.025144535021	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTGTCCTGTCTTCTGT	NA	False	NA	19	True	AATAAA	-37	NA	36812631	36816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_36812677_36813480_36813668_36814580_36814819_36814926
ENSMUSG00000033272.13_36812632_36816914_3	chr18	+	2566	3	FSM	ENSMUSG00000033272.13	ENSMUST00000170288.2	403	3	-4	-2159	0	0	multi-exon	FALSE	canonical	3	17	junction_1	222	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTGTCCTGTCTTCTGT	NA	False	NA	19	True	AATAAA	-37	NA	36812631	36816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_36812677_36813480_36813668_36814580
ENSMUSG00000033282.15_92034617_92039866_1	chr8	-	326	3	ISM	ENSMUSG00000033282.15	ENSMUST00000139113.8	5046	26	-16	89033	-16	0	5prime_fragment	FALSE	canonical	3	21	junction_2	3	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTTTCTTATAAACTTA	NA	False	NA	NA	False	GATAAA	-43	NA	92039866	92034616	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_92034815_92036965_92037058_92039830
ENSMUSG00000033285.16_100045496_100069723_1	chr3	-	3377	27	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_25	119.848400294933	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGTTCCCTGAATAT	NA	False	NA	-15	True	ATTAAA	-15	NA	100069723	100045495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
ENSMUSG00000033285.16_100045735_100069723_1	chr3	-	3193	27	FSM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	0	239	0	-239	multi-exon	FALSE	canonical	3	562	junction_13	50.4098586206493	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTCCGAAGTGTCT	NA	False	NA	-29	True	TTTAAA	-37	NA	100069723	100045734	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ENSMUSG00000033294.12_110796451_110801252_1	chr5	-	1871	14	NNC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-6	-167	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	191.736135253974	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTAGTGTGGTT	8872	False	NA	-11	True	AATAAA	-15	NA	110801252	110796450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798480_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ENSMUSG00000033294.12_110796451_110801252_2	chr5	-	1873	15	NNC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-6	-167	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	185.501815272487	1566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTAGTGTGGTT	8872	False	NA	-11	True	AATAAA	-15	NA	110801252	110796450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800278_110800872_110800998_110801088
ENSMUSG00000033294.12_110796451_110801252_3	chr5	-	1871	15	NNC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-6	-167	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	180.699618264169	1503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTAGTGTGGTT	8872	False	NA	-11	True	AATAAA	-15	NA	110801252	110796450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_110796850_110796931_110797046_110797197_110797275_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ENSMUSG00000033294.12_110796451_110801252_4	chr5	-	1868	15	NNC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-6	-167	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	183.658400742425	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTAGTGTGGTT	8872	False	NA	-11	True	AATAAA	-15	NA	110801252	110796450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800989_110801088
ENSMUSG00000033318.8_75667679_75670244_1	chr10	-	899	5	FSM	ENSMUSG00000033318.8	ENSMUST00000038257.7	1370	5	471	0	-27	0	multi-exon	FALSE	canonical	3	39	junction_1	6.29980158417708	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTTTTTTTCTTTTTT	NA	False	NA	-4	True	AATAAA	-21	NA	75670244	75667678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_75667929_75668228_75668403_75668494_75668646_75669485_75669574_75670008
ENSMUSG00000033318.8_75667679_75673201_1	chr10	-	728	4	NIC	ENSMUSG00000033318.8	novel	2254	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	22.0957512255687	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTTTTTTTCTTTTTT	NA	False	NA	-4	True	AATAAA	-21	NA	75673201	75667678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_75667929_75668228_75668403_75668494_75668646_75673048
ENSMUSG00000033319.6_46637739_46658926_1	chr18	-	2688	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	112	2926	112	-2926	multi-exon	FALSE	canonical	3	135	junction_1	21.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCTACAGTGTTCCC	NA	False	NA	NA	False	NA	NA	NA	46658926	46637738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_46639457_46657168_46657897_46658684
ENSMUSG00000033319.6_46637968_46658926_1	chr18	-	2459	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	112	3155	112	-3155	multi-exon	FALSE	canonical	3	135	junction_1	21.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTGTGAATTATTGAG	NA	False	NA	-20	True	TATAAA	-15	NA	46658926	46637967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_46639457_46657168_46657897_46658684
ENSMUSG00000033335.18_21336241_21418436_1	chr9	+	3501	20	NNC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	169.277493501334	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	5879	False	NA	20	True	AATAAA	-30	NA	21336240	21418436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401102_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ENSMUSG00000033335.18_21418851_21421483_1	chr9	+	1278	4	NIC	ENSMUSG00000033335.18	novel	1772	12	NA	NA	2448	2428	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTCACGGGGCGTGGAC	7012	False	NA	NA	False	NA	NA	NA	21418850	21421483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_21419688_21420226_21420411_21420584_21420648_21421289
ENSMUSG00000033373.17_76948951_76967137_1	chr12	+	861	6	NNC	ENSMUSG00000033373.17	novel	384	2	NA	NA	-7309	132	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	113.544000281829	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACGGTGGTGTGATTTTT	NA	False	NA	NA	False	AAAACA	-24	NA	76948950	76967137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_76949034_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ENSMUSG00000033373.17_76948951_76967699_1	chr12	+	1423	6	NNC	ENSMUSG00000033373.17	novel	384	2	NA	NA	-7309	266	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	113.544000281829	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCAGCCCCTGCCTCTCC	NA	False	NA	NA	False	NA	NA	NA	76948950	76967699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_76949034_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ENSMUSG00000033373.17_76948951_76968186_1	chr12	+	1910	6	NNC	ENSMUSG00000033373.17	novel	384	2	NA	NA	-7309	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	113.544000281829	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	76948950	76968186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_76949034_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ENSMUSG00000033396.14_121859027_121884112_2	chr2	-	2446	8	NIC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	64665	24974	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	1524	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGAGGCTCCGCCCCACG	NA	False	NA	NA	False	NA	NA	NA	121884112	121859026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ENSMUSG00000033396.14_121913954_121948857_1	chr2	-	3364	19	ISM	ENSMUSG00000033396.14	ENSMUST00000036450.8	7671	40	10	29953	-1	10067	5prime_fragment	FALSE	canonical	0	0	junction_5	24.6964909788145	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCGCTCTTCCCACAGT	6989	False	NA	NA	False	NA	NA	NA	121948857	121913953	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ENSMUSG00000033400.15_116584608_116601778_1	chr3	-	881	5	ISM	ENSMUSG00000033400.15	ENSMUST00000159742.8	4344	28	0	36424	0	-179	5prime_fragment	FALSE	canonical	3	43	junction_4	9.01041064547005	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTAGTATTTTCATT	NA	False	NA	NA	False	ATTAAA	-13	NA	116601778	116584607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
ENSMUSG00000033405.5_73756985_73762651_1	chr14	-	2479	3	ISM	ENSMUSG00000033405.5	ENSMUST00000043813.3	3579	5	23031	668	0	-668	3prime_fragment	FALSE	canonical	2	19	junction_1	0.5	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAATTACAATGTGCTGT	NA	False	NA	NA	False	AATAAA	-27	NA	73762651	73756984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_73759115_73760737_73760935_73762499
ENSMUSG00000033411.17_121786941_121842545_1	chr2	+	3016	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	459	1578	0	-324	multi-exon	FALSE	canonical	3	334	junction_9	41.0940655353327	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGGAGTATGTCAGTTAA	NA	False	NA	6	True	ATTAAA	-17	NA	121786940	121842545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ENSMUSG00000033419.17_86647986_86680832_1	chr9	-	2251	8	NIC	ENSMUSG00000033419.17	novel	4336	30	NA	NA	-80	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	8.43220260764212	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGCAAACGTAATCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	86680832	86647985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_86649390_86655571_86655677_86656249_86656334_86657644_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86680590
ENSMUSG00000033429.11_64042488_64049067_1	chr7	+	709	3	NNC	ENSMUSG00000033429.11	novel	327	2	NA	NA	0	537	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	13.5	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTTCTTCTCATTGA	NA	False	NA	NA	False	NA	NA	NA	64042487	64049067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_64042592_64048440_64048903_64048924
ENSMUSG00000033429.11_64042488_64061873_1	chr7	+	954	4	NNC	ENSMUSG00000033429.11	novel	828	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	84.9156444164835	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTTATTTGAATTT	NA	False	NA	25	True	ATTAAA	-26	NA	64042487	64061873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_64042592_64048440_64048662_64049916_64050255_64061582
ENSMUSG00000033429.11_64042488_64061873_2	chr7	+	792	4	NNC	ENSMUSG00000033429.11	novel	828	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	40.2022663816634	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTTATTTGAATTT	NA	False	NA	25	True	ATTAAA	-26	NA	64042487	64061873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_64042592_64048440_64048662_64049916_64050093_64061582
ENSMUSG00000033429.11_64042488_64061873_3	chr7	+	733	3	FSM	ENSMUSG00000033429.11	ENSMUST00000037205.11	828	3	95	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	55.5	1942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTTATTTGAATTT	NA	False	NA	25	True	ATTAAA	-26	NA	64042487	64061873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_64042592_64049916_64050255_64061582
ENSMUSG00000033430.11_112738034_112745833_1	chr8	+	2229	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	4	1327	0	-1327	multi-exon	FALSE	canonical	3	135	junction_1	1.5	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCATTTTCTTTGATTTT	NA	False	NA	NA	False	AATAAA	-27	NA	112738033	112745833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_112738775_112741968_112742094_112744470
ENSMUSG00000033436.14_133704896_133709745_1	chrX	-	3441	6	FSM	ENSMUSG00000033436.14	ENSMUST00000113193.9	3666	6	225	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	6.60302960768767	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTGTTCTGGTGCTT	NA	False	NA	-3	True	AATAAA	-19	NA	133709745	133704895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_133707763_133708010_133708077_133708202_133708263_133708369_133708475_133708983_133709249_133709667
ENSMUSG00000033436.14_133707410_133709745_1	chrX	-	927	6	FSM	ENSMUSG00000033436.14	ENSMUST00000113193.9	3666	6	225	2514	0	-176	multi-exon	FALSE	canonical	3	17	junction_5	6.60302960768767	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCGATATTGAGATAATGAA	NA	False	NA	NA	False	NA	NA	NA	133709745	133707409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_133707763_133708010_133708077_133708202_133708263_133708369_133708475_133708983_133709249_133709667
ENSMUSG00000033439.13_116388659_116415524_1	chr3	-	2139	14	NIC	ENSMUSG00000033439.13	novel	3402	12	NA	NA	-7288	384	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCCGCGGAGGAGGAGG	8616	False	NA	NA	False	NA	NA	NA	116415524	116388658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031
ENSMUSG00000033439.13_116388659_116416301_1	chr3	-	2916	14	NIC	ENSMUSG00000033439.13	novel	3402	12	NA	NA	-8065	384	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCCGCGGAGGAGGAGG	7839	False	NA	NA	False	NA	NA	NA	116416301	116388658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031
ENSMUSG00000033454.7_76417346_76435222_1	chr12	+	3382	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	306	8502	306	-8502	multi-exon	FALSE	canonical	3	110	junction_1	0	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAATCTGGTTGTTCTA	NA	False	NA	NA	False	AATAAA	-14	NA	76417345	76435222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_76417505_76431999
ENSMUSG00000033460.15_133618712_133622666_2	chrX	+	2312	5	NNC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	26.9664142963057	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618711	133622666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_133618800_133619474_133619568_133619668_133619858_133620375_133620475_133620823
ENSMUSG00000033460.15_133618737_133622666_1	chrX	+	2263	6	NNC	ENSMUSG00000033460.15	novel	2303	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	59.4151495832502	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618736	133622666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_133618800_133619118_133619211_133619474_133619568_133619668_133619742_133620375_133620475_133620823
ENSMUSG00000033460.15_133618737_133622666_3	chrX	+	2194	4	NNC	ENSMUSG00000033460.15	novel	2253	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	53.074371299987	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618736	133622666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_133618800_133619668_133619858_133620375_133620475_133620823
ENSMUSG00000033460.15_133618737_133622666_4	chrX	+	2171	5	NNC	ENSMUSG00000033460.15	novel	2303	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	54.8925085963467	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618736	133622666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_133618800_133619474_133619568_133619668_133619742_133620375_133620475_133620823
ENSMUSG00000033460.15_133618737_133622666_5	chrX	+	2078	4	NNC	ENSMUSG00000033460.15	novel	2179	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_3	34.8839345385363	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618736	133622666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_133618800_133619668_133619742_133620375_133620475_133620823
ENSMUSG00000033467.13_109702575_109703441_1	chr5	-	665	2	ISM	ENSMUSG00000033467.13	ENSMUST00000198960.2	812	5	898	-6	898	0	intron_retention	FALSE	canonical	3	615	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	-7	True	NA	NA	NA	109703441	109702574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_109702937_109703138
ENSMUSG00000033467.13_109702575_109703441_2	chr5	-	516	3	ISM	ENSMUSG00000033467.13	ENSMUST00000198960.2	812	5	898	-6	898	0	3prime_fragment	FALSE	canonical	3	516	junction_2	49.5	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	-7	True	NA	NA	NA	109703441	109702574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_109702937_109703138_109703224_109703372
ENSMUSG00000033467.13_109702575_109704410_1	chr5	-	856	5	ISM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	2392	0	-71	0	3prime_fragment	FALSE	canonical	1	50	junction_4	239.958720408324	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	-7	True	NA	NA	NA	109704410	109702574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285
ENSMUSG00000033475.16_47997571_47998993_1	chr17	-	634	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	115	0	0	0	multi-exon	FALSE	canonical	3	3748	junction_1	369	14236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTCAAGAGACAGGCATG	NA	False	NA	82	True	AATAAA	-16	NA	47998993	47997570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47997934_47998112_47998214_47998823
ENSMUSG00000033475.16_47997665_47998993_1	chr17	-	540	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	115	94	0	0	multi-exon	FALSE	canonical	3	3748	junction_1	369	13884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTATTTTATTCTTTT	NA	False	NA	-12	True	AATAAA	-15	NA	47998993	47997664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47997934_47998112_47998214_47998823
ENSMUSG00000033487.15_72823210_72840811_1	chr14	-	663	3	Genic_Genomic	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-409	-11204	multi-exon	FALSE	non_canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCCAGGCAACTGGGAT	6736	False	NA	NA	False	NA	NA	NA	72840811	72823209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr14_-_72823328_72827153_72827269_72840381
ENSMUSG00000033488.12_157286150_157316632_1	chr1	+	1209	8	FSM	ENSMUSG00000033488.12	ENSMUST00000193791.6	778	8	3	-434	0	2	multi-exon	FALSE	canonical	1	1	junction_7	18.9725903258746	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	157286149	157316632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157294735_157294818_157316012
ENSMUSG00000033491.14_86625702_86639583_1	chr9	+	2531	2	FSM	ENSMUSG00000033491.14	ENSMUST00000036426.13	3444	2	0	913	0	-742	multi-exon	FALSE	canonical	3	21	junction_1	0	2411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTCTTGTGGGTGAT	NA	False	NA	NA	False	NA	NA	NA	86625701	86639583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_86625860_86637210
ENSMUSG00000033540.19_108817161_108832421_1	chr5	+	3182	14	FSM	ENSMUSG00000033540.19	ENSMUST00000112563.9	3373	14	189	2	0	-2	multi-exon	FALSE	canonical	2	36	junction_11	7.1294040681437	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGGCCTCCCAAGTCT	NA	False	NA	15	True	NA	NA	NA	108817160	108832421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ENSMUSG00000033543.18_69919866_69930020_1	chr9	+	731	5	FSM	ENSMUSG00000033543.18	ENSMUST00000118198.8	893	5	34	128	0	0	multi-exon	FALSE	canonical	3	697	junction_3	95.7131129992124	3572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919865	69930020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69926670_69926798_69929718
ENSMUSG00000033543.18_69919866_69930020_2	chr9	+	901	6	NIC	ENSMUSG00000033543.18	novel	1199	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	366.992098007573	2669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919865	69930020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_69919944_69922573_69922693_69923049_69923220_69924100_69924206_69926670_69926798_69929718
ENSMUSG00000033543.18_69919866_69930020_3	chr9	+	999	5	NIC	ENSMUSG00000033543.18	novel	1199	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_3	356.599477705731	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919865	69930020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_69919944_69922573_69922693_69924100_69924474_69926670_69926798_69929718
ENSMUSG00000033554.18_115681843_115696532_1	chr3	+	672	6	NNC	ENSMUSG00000033554.18	novel	1438	8	NA	NA	0	1741	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	137.129719608843	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTTTTTAATTTTTAT	7769	False	NA	NA	False	ATTAAA	-20	NA	115681842	115696532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115695666_115695778_115696447
ENSMUSG00000033554.18_115681843_115722737_1	chr3	+	1321	8	FSM	ENSMUSG00000033554.18	ENSMUST00000043342.10	1576	8	11	244	0	0	multi-exon	FALSE	canonical	3	254	junction_6	12.9331089117215	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTTTATAATCTCC	7769	False	NA	8	True	AATAAA	-18	NA	115681842	115722737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
ENSMUSG00000033554.18_115681843_115722737_2	chr3	+	1071	9	NNC	ENSMUSG00000033554.18	novel	1576	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	90.812220405626	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTTTATAATCTCC	7769	False	NA	8	True	AATAAA	-18	NA	115681842	115722737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157_115722231_115722480
ENSMUSG00000033554.18_115681843_115722737_3	chr3	+	1090	9	NNC	ENSMUSG00000033554.18	novel	1576	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	88.5183596775268	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTTTATAATCTCC	7769	False	NA	8	True	AATAAA	-18	NA	115681842	115722737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157_115722250_115722480
ENSMUSG00000033578.8_133196140_133206718_1	chrX	+	1752	2	FSM	ENSMUSG00000033578.8	ENSMUST00000037687.8	1918	2	166	0	166	0	multi-exon	FALSE	canonical	1	1	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGGTGTGGATATGGA	NA	False	NA	6	True	AATAAA	-18	NA	133196139	133206718	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133196379_133205205
ENSMUSG00000033581.18_21877759_21981791_1	chr16	-	3641	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	258	0	-22	0	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGTCTTGGTGTCTT	2531	False	NA	NA	False	AATATA	-16	NA	21981791	21877758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ENSMUSG00000033581.18_21878210_21981791_1	chr16	-	3190	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	258	451	-22	0	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCACCTTGCTCTTGTGT	2531	False	NA	-5	True	AATAAA	-24	NA	21981791	21878209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ENSMUSG00000033581.18_21879551_21981791_1	chr16	-	1849	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	258	1792	-22	565	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGAGGCTCCCACAGC	2531	False	NA	NA	False	NA	NA	NA	21981791	21879550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ENSMUSG00000033589.5_70782794_70786373_1	chr14	+	1673	7	FSM	ENSMUSG00000033589.5	ENSMUST00000226563.2	1444	7	103	-332	0	0	multi-exon	FALSE	canonical	3	251	junction_2	32.9313258497471	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTCTTCACATCTC	6567	False	NA	30	True	AATAAA	-26	NA	70782793	70786373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_70783179_70783916_70783990_70784369_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
ENSMUSG00000033632.17_25302071_25338643_1	chr18	+	2073	5	ISM	ENSMUSG00000033632.17	ENSMUST00000162149.2	1427	6	-6	85322	0	16353	5prime_fragment	FALSE	canonical	3	40	junction_3	4.32290411644765	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGCTTTATGTTGAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	25302070	25338643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917
ENSMUSG00000033658.17_111734644_111758383_1	chr8	-	1751	12	FSM	ENSMUSG00000033658.17	ENSMUST00000065784.6	3104	12	0	1353	0	-1353	multi-exon	FALSE	canonical	3	86	junction_11	90.7354705715175	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCATCTTTTTTTTTTGG	NA	False	NA	2	True	AATACA	-20	NA	111758383	111734643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111758253
ENSMUSG00000033685.14_100142561_100148727_1	chr7	+	1471	8	FSM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	17	2500	0	218	multi-exon	TRUE	canonical	3	366	junction_1	56.4938140012529	3044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCTCAGCCCTTTCTA	NA	False	NA	-92	True	NA	NA	NA	100142560	100148727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_100142673_100143420_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ENSMUSG00000033685.14_100142561_100148832_1	chr7	+	1576	8	FSM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	17	2395	0	323	multi-exon	FALSE	canonical	3	366	junction_1	56.4938140012529	4084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTCTTTCTCATATG	NA	False	NA	13	True	CATAAA	-15	NA	100142560	100148832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_100142673_100143420_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ENSMUSG00000033685.14_100142561_100148832_2	chr7	+	1570	8	NNC	ENSMUSG00000033685.14	novel	3988	8	NA	NA	0	323	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	163.824321037095	4042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTCTTTCTCATATG	NA	False	NA	13	True	CATAAA	-15	NA	100142560	100148832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_100142673_100143420_100143583_100145932_100146156_100146301_100146513_100147290_100147480_100147554_100147657_100147942_100148124_100148442
ENSMUSG00000033701.14_155434084_155562979_1	chr1	+	1279	8	FSM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	216	4097	212	138	multi-exon	TRUE	canonical	3	134	junction_7	98.5478232605254	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGACGTCTCAGCAACTC	NA	False	NA	29	True	AATAAA	-21	NA	155434083	155562979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
ENSMUSG00000033706.14_85408971_85422179_1	chr6	+	1248	13	FSM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	0	1238	0	0	multi-exon	FALSE	canonical	3	411	junction_7	60.725246442938	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATGACCGACGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	85408970	85422179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ENSMUSG00000033706.14_85408984_85422414_1	chr6	+	1470	13	FSM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	13	1003	0	0	multi-exon	FALSE	canonical	3	411	junction_7	60.725246442938	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCATCACAAGCCTTCCA	NA	False	NA	NA	False	NA	NA	NA	85408983	85422414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ENSMUSG00000033712.7_70375613_70391155_1	chr14	-	3624	21	FSM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	105	-4	105	0	multi-exon	TRUE	canonical	0	0	junction_8	38.4373191052654	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGTCTTTGTAGCTAG	NA	False	NA	48	True	AATAAA	-22	NA	70391155	70375612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ENSMUSG00000033732.11_111537124_111573413_1	chr8	-	4306	27	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-5	-253	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_16	201.421663160973	1283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573413	111537123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ENSMUSG00000033732.11_111569413_111573413_2	chr8	-	478	3	ISM	ENSMUSG00000033732.11	ENSMUST00000212515.2	2957	13	6	18346	-5	-2213	5prime_fragment	FALSE	canonical	3	689	junction_2	52	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACCAAGAAACTTTTGGC	NA	False	NA	NA	False	NA	NA	NA	111573413	111569412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_111569647_111571094_111571232_111573306
ENSMUSG00000033751.6_85558911_85561093_1	chr8	+	716	2	FSM	ENSMUSG00000033751.6	ENSMUST00000036734.6	2494	2	760	1018	760	-1018	multi-exon	FALSE	canonical	3	736	junction_1	0	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTACACATTCTCCCTC	3434	False	NA	25	True	AATAAA	-20	NA	85558910	85561093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85559270_85560736
ENSMUSG00000033751.6_85558911_85561093_2	chr8	+	671	3	NNC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	760	-1018	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	368	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTACACATTCTCCCTC	3434	False	NA	25	True	AATAAA	-20	NA	85558910	85561093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85559088_85559132_85559270_85560736
ENSMUSG00000033751.6_85558911_85562111_1	chr8	+	1734	2	FSM	ENSMUSG00000033751.6	ENSMUST00000036734.6	2494	2	760	0	760	0	multi-exon	FALSE	canonical	3	736	junction_1	0	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATATATATACTTTCTC	3434	False	NA	NA	False	NA	NA	NA	85558910	85562111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85559270_85560736
ENSMUSG00000033751.6_85561540_85567274_1	chr8	+	1815	9	NNC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	3389	5163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCGCGCCAAGCACTTCC	6063	False	NA	NA	False	NA	NA	NA	85561539	85567274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565273_85565422_85565585_85567122
ENSMUSG00000033751.6_85561540_85567274_2	chr8	+	1813	9	NNC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	3389	5163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	842	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCGCGCCAAGCACTTCC	6063	False	NA	NA	False	NA	NA	NA	85561539	85567274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85562298_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ENSMUSG00000033751.6_85561540_85567274_3	chr8	+	1831	9	NNC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	3389	5163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCGCGCCAAGCACTTCC	6063	False	NA	NA	False	NA	NA	NA	85561539	85567274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85562304_85562383_85562549_85564076_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ENSMUSG00000033751.6_85561540_85567274_4	chr8	+	1816	9	NNC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	3389	5163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCGCGCCAAGCACTTCC	6063	False	NA	NA	False	NA	NA	NA	85561539	85567274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565579_85567122
ENSMUSG00000033751.6_85561540_85567274_5	chr8	+	1814	9	NNC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	3389	5163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCGCGCCAAGCACTTCC	6063	False	NA	NA	False	NA	NA	NA	85561539	85567274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85562304_85562383_85562549_85564088_85564215_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ENSMUSG00000033751.6_85561540_85567274_6	chr8	+	1811	9	NNC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	3389	5163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCGCGCCAAGCACTTCC	6063	False	NA	NA	False	NA	NA	NA	85561539	85567274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85562304_85562383_85562541_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ENSMUSG00000033751.6_85561540_85567274_7	chr8	+	1812	9	NNC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	3389	5163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCGCGCCAAGCACTTCC	6063	False	NA	NA	False	NA	NA	NA	85561539	85567274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85562304_85562383_85562549_85564088_85564223_85564317_85564387_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ENSMUSG00000033751.6_85562106_85567274_1	chr8	+	1265	9	NNC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	3955	5163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCGCGCCAAGCACTTCC	6629	False	NA	NA	False	NA	NA	NA	85562105	85567274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85562304_85562383_85562549_85564076_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ENSMUSG00000033752.8_83995240_84063093_1	chr3	-	685	6	NIC	ENSMUSG00000033752.8	novel	875	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	90.5507592458506	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	84063093	83995239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_83995482_84000861_84000907_84041324_84041474_84045475_84045534_84049005_84049072_84062968
ENSMUSG00000033752.8_83995240_84063093_2	chr3	-	1017	9	NNC	ENSMUSG00000033752.8	novel	875	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	93.5277365277274	1986	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	84063093	83995239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_83995482_84000861_84000907_84012241_84012357_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84049162_84049305_84062968
ENSMUSG00000033752.8_83995240_84063093_3	chr3	-	800	7	NIC	ENSMUSG00000033752.8	novel	875	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	79.9112354775945	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	84063093	83995239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_83995482_84000861_84000907_84012241_84012357_84041324_84041474_84045475_84045534_84049005_84049072_84062968
ENSMUSG00000033752.8_83995240_84063093_4	chr3	-	869	8	NNC	ENSMUSG00000033752.8	novel	875	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	78.2043372668482	2202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	84063093	83995239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_83995482_84000861_84000907_84012241_84012357_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049066_84062968
ENSMUSG00000033752.8_83995240_84063093_5	chr3	-	873	8	NNC	ENSMUSG00000033752.8	novel	875	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	76.9712376707782	2193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	84063093	83995239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_83995482_84000861_84000901_84012237_84012357_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84062968
ENSMUSG00000033760.18_4806571_4809000_1	chr19	+	1846	2	FSM	ENSMUSG00000033760.18	ENSMUST00000182065.2	4194	2	-22	2370	0	-1729	multi-exon	FALSE	canonical	3	81	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATGCTATTTGCAACC	NA	False	NA	NA	False	AATAAA	-17	NA	4806570	4809000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4806690_4807273
ENSMUSG00000033762.9_76585665_76587772_1	chr15	-	1579	5	NIC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	6638	2088	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCATGCTTTGCGCAGG	NA	False	NA	NA	False	NA	NA	NA	76587772	76585664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_76586551_76586843_76586992_76587078_76587204_76587273_76587384_76587462
ENSMUSG00000033790.12_55443973_55481195_1	chr7	+	3604	23	FSM	ENSMUSG00000033790.12	ENSMUST00000032627.5	3905	23	71	230	0	1	multi-exon	FALSE	canonical	3	52	junction_19	13.708973353728	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTACCTATTTCATGT	NA	False	NA	16	True	AATAAA	-19	NA	55443972	55481195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ENSMUSG00000033793.13_5153355_5169537_1	chr1	+	913	7	NNC	ENSMUSG00000033793.13	novel	1811	13	NA	NA	0	-463	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	186.553834946734	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTATTATATCTAAATACT	NA	False	NA	NA	False	AATAAA	-17	NA	5153354	5169537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5169330
ENSMUSG00000033793.13_5153355_5232563_1	chr1	+	1808	14	FSM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	52	189	0	0	multi-exon	FALSE	canonical	3	428	junction_7	59.3277926628703	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATACTGCCTGTATTAG	NA	False	NA	-91	True	AATAAA	-28	NA	5153354	5232563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ENSMUSG00000033793.13_5153355_5232671_1	chr1	+	1826	13	NIC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	0	29	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	155.225284309255	1351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTTAAATTTTGCTT	NA	False	NA	17	True	ATTAAA	-17	NA	5153354	5232671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_5153502_5154639_5154787_5159231_5159335_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ENSMUSG00000033808.17_120185793_120234562_1	chr2	-	2868	21	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_1	132.468147114693	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234562	120185792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_120185973_120185998_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202103_120204372_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ENSMUSG00000033808.17_120185793_120234562_2	chr2	-	2863	21	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_1	132.468147114693	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234562	120185792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_120185973_120186003_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202103_120204372_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ENSMUSG00000033808.17_120185793_120234562_3	chr2	-	2862	21	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_1	140.435251984678	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234562	120185792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_120185973_120185999_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202114_120204968_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ENSMUSG00000033813.16_4928037_4966879_3	chr1	+	1296	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	0	-1249	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	595.509678995881	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGATCTGTTAATGC	NA	False	NA	NA	False	ATTAAA	-32	NA	4928036	4966879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961015_4962134_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUSG00000033813.16_4928037_4968132_1	chr1	+	2549	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	595.509678995881	3205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTTTTGTCTTTTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	4928036	4968132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961015_4962134_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUSG00000033813.16_4928037_4968132_2	chr1	+	2548	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	595.509678995881	4051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTTTTGTCTTTTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	4928036	4968132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961014_4962134_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUSG00000033813.16_4928037_4968132_3	chr1	+	2543	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	605.473735552951	2118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTTTTGTCTTTTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	4928036	4968132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_4928200_4937692_4937756_4948257_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUSG00000033813.16_4928037_4968132_4	chr1	+	2548	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	595.509678995881	3687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTTTTGTCTTTTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	4928036	4968132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961029_4962149_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUSG00000033826.11_30841415_30844234_1	chr17	+	1048	3	NIC	ENSMUSG00000033826.11	novel	14583	93	NA	NA	-1913	-10376	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGACTCCGGGTGCT	NA	False	NA	NA	False	NA	NA	NA	30841414	30844234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_30841669_30843173_30843588_30843854
ENSMUSG00000033826.11_30841415_30845845_1	chr17	+	758	3	NIC	ENSMUSG00000033826.11	novel	14583	93	NA	NA	-1913	-8765	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	745	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCGCCTCGCCCAACT	NA	False	NA	NA	False	NA	NA	NA	30841414	30845845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_30841669_30843173_30843588_30845755
ENSMUSG00000033826.11_30841415_30846521_1	chr17	+	792	3	NNC	ENSMUSG00000033826.11	novel	14583	93	NA	NA	-1913	-8089	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1014	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGCTTGCAGGAACAC	NA	False	NA	NA	False	NA	NA	NA	30841414	30846521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_30841669_30843173_30843588_30846397
ENSMUSG00000033826.11_30841415_30846635_1	chr17	+	906	3	NNC	ENSMUSG00000033826.11	novel	14583	93	NA	NA	-1913	-7975	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1220	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACAGCTCAAACTTCTC	NA	False	NA	NA	False	NA	NA	NA	30841414	30846635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_30841669_30843173_30843588_30846397
ENSMUSG00000033826.11_30841415_30846740_1	chr17	+	1011	3	NNC	ENSMUSG00000033826.11	novel	14583	93	NA	NA	-1913	-7870	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1325	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTGCATAGACCACACC	NA	False	NA	NA	False	NA	NA	NA	30841414	30846740	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_30841669_30843173_30843588_30846397
ENSMUSG00000033837.6_76552029_76554016_1	chr15	-	1564	4	NNC	ENSMUSG00000033837.6	novel	1365	3	NA	NA	-14	396	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	153.328260785661	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGTCTGGTATTGGGG	NA	False	NA	-4	True	AGTAAA	-20	NA	76554016	76552028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_76552702_76552766_76553341_76553428_76553534_76553804
ENSMUSG00000033837.6_76552029_76554016_2	chr15	-	1629	3	FSM	ENSMUSG00000033837.6	ENSMUST00000037824.6	1365	3	132	-396	-14	396	multi-exon	FALSE	canonical	3	304	junction_2	19.5	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGTCTGGTATTGGGG	NA	False	NA	-4	True	AGTAAA	-20	NA	76554016	76552028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76553341_76553428_76553534_76553804
ENSMUSG00000033837.6_76552973_76554148_1	chr15	-	817	3	FSM	ENSMUSG00000033837.6	ENSMUST00000037824.6	1365	3	0	548	0	152	multi-exon	FALSE	canonical	3	304	junction_2	19.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGCCTCTGTGGCCCCTCT	NA	False	NA	NA	False	NA	NA	NA	76554148	76552972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76553341_76553428_76553534_76553804
ENSMUSG00000033845.14_4844659_4855933_1	chr1	-	664	5	FSM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	0	1230	0	0	multi-exon	FALSE	canonical	3	144	junction_1	911.97762445139	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACATCTGACCAGCAT	1649	False	NA	-18	True	NA	NA	NA	4855933	4844658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_4844740_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ENSMUSG00000033845.14_4846600_4855933_1	chr1	-	1008	5	FSM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	29	3166	0	0	multi-exon	FALSE	canonical	3	2059	junction_1	113.670576667843	11330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGCTCAGGTCTTTTG	1649	False	NA	-10	True	ATTAAA	-22	NA	4855933	4846599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ENSMUSG00000033857.13_118367798_118378602_1	chr11	+	2484	14	FSM	ENSMUSG00000033857.13	ENSMUST00000171769.8	3807	14	12	1311	0	3	multi-exon	FALSE	canonical	2	6	junction_2	29.6532225814911	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAAAGGTGCTTCTTTT	NA	False	NA	9	True	CATAAA	-16	NA	118367797	118378602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_118367931_118369708_118369780_118369915_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
ENSMUSG00000033863.3_23112221_23142544_1	chr19	+	596	2	Fusion	ENSMUSG00000033863.3_ENSMUSG00000044387.6	novel	414	2	NA	NA	-43	-291	multi-exon	FALSE	canonical	3	42	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCCTTTGTTTTTGGG	NA	False	NA	NA	False	AATAAA	-12	NA	23112220	23142544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr19_+_23112319_23142046
ENSMUSG00000033904.17_118311775_118322261_1	chr7	+	2269	5	ISM	ENSMUSG00000033904.17	ENSMUST00000106557.8	5073	16	0	13986	0	-9424	5prime_fragment	TRUE	canonical	3	88	junction_3	7.03562363973514	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAACTTAGAAGTGATT	NA	False	NA	NA	False	NA	NA	NA	118311774	118322261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616
ENSMUSG00000033917.16_118287768_118304971_1	chr7	-	1552	6	FSM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	30	0	0	0	multi-exon	TRUE	canonical	3	428	junction_5	40.804901666344	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTACTGATCTTCTGGT	NA	False	NA	3	True	AATAAA	-28	NA	118304971	118287767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118297777_118297954_118304612
ENSMUSG00000033918.17_20098570_20121111_1	chr16	-	1273	9	NIC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_6	575.510208423795	2980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	False	NA	-16	True	AATAAA	-24	NA	20121111	20098569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20116342_20116484_20116880_20117077_20120958
ENSMUSG00000033940.9_113581733_113593656_1	chr6	+	839	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	0	256	0	-256	multi-exon	FALSE	canonical	3	441	junction_2	10.5	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGACTGTGGTGGCA	NA	False	NA	23	True	AATAAA	-16	NA	113581732	113593656	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113581858_113592736_113592820_113593025
ENSMUSG00000033943.16_119703307_119762412_1	chr2	+	3764	10	NNC	ENSMUSG00000033943.16	novel	825	2	NA	NA	-24402	5240	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	24.7196627888623	213	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTAAGCCTGTTTGTTGT	8250	False	NA	NA	False	ATTAAA	-34	NA	119703306	119762412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191
ENSMUSG00000033960.7_4634878_4674315_1	chr18	+	2286	3	ISM	ENSMUSG00000033960.7	ENSMUST00000037029.7	6782	4	0	8554	0	-6494	5prime_fragment	FALSE	canonical	3	21	junction_2	15	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTCCATGAAGACTCCAA	NA	False	NA	NA	False	AATACA	-21	NA	4634877	4674315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_+_4635032_4649074_4649406_4672514
ENSMUSG00000033963.17_113508665_113573980_2	chr6	-	5492	44	NIC	ENSMUSG00000033963.17	novel	1358	4	NA	NA	3696	65057	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAACGGCGCTCTGACG	NA	False	NA	NA	False	NA	NA	NA	113573980	113508664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ENSMUSG00000033970.16_151566289_151574673_1	chr5	-	1293	8	NIC	ENSMUSG00000033970.16	novel	1317	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	280	junction_1	25.7206341369758	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTATCATTTGTGTTTG	NA	False	NA	-8	True	AATAAA	-15	NA	151574673	151566288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_151566569_151567175_151567246_151568077_151568392_151568982_151569165_151570903_151571002_151571709_151571778_151573336_151573475_151574530
ENSMUSG00000033972.10_22556970_22580381_1	chr17	-	2838	7	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	35.9463334554289	517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22580381	22556969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22574061_22574116_22577803_22577970_22578420_22578506_22580148
ENSMUSG00000033972.10_22558833_22580381_1	chr17	-	921	6	FSM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	0	1863	0	-1863	multi-exon	FALSE	canonical	3	51	junction_4	24.8997991959775	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTCTATCATTGGTC	NA	False	NA	0	True	TATAAA	-21	NA	22580381	22558832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577970_22578420_22578506_22580148
ENSMUSG00000033972.10_22558833_22580381_2	chr17	-	975	7	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	0	-1863	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	35.9463334554289	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTCTATCATTGGTC	NA	False	NA	0	True	TATAAA	-21	NA	22580381	22558832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22574061_22574116_22577803_22577970_22578420_22578506_22580148
ENSMUSG00000033983.15_88861078_88861820_1	chr11	+	180	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	0	-19960	at_least_one_novel_splicesite	FALSE	canonical	3	638	junction_1	208	4359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTTAACCACTGGGCCA	9431	False	NA	NA	False	NA	NA	NA	88861077	88861820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_88861099_88861243_88861306_88861723
ENSMUSG00000033983.15_88861078_88861820_2	chr11	+	255	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	0	-19960	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	319	4675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTTAACCACTGGGCCA	9431	False	NA	NA	False	NA	NA	NA	88861077	88861820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_88861099_88861243_88861381_88861723
ENSMUSG00000033983.15_88861078_88861820_3	chr11	+	225	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	0	-19960	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	319	4737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTTAACCACTGGGCCA	9431	False	NA	NA	False	NA	NA	NA	88861077	88861820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_88861099_88861243_88861351_88861723
ENSMUSG00000033985.18_116661199_116664504_1	chr4	+	2012	8	NNC	ENSMUSG00000033985.18	novel	2430	9	NA	NA	32239	1351	intron_retention	FALSE	non_canonical	0	0	junction_1	0	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCGGGTTTTGCAGTTGC	9677	False	NA	NA	False	AAAACA	-37	NA	116661198	116664504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664409
ENSMUSG00000033985.18_116661199_116664747_1	chr4	+	1997	7	NNC	ENSMUSG00000033985.18	novel	2430	9	NA	NA	32239	1594	intron_retention	FALSE	non_canonical	0	0	junction_1	0	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACTTCCGCTTCGTCTC	9677	False	NA	NA	False	NA	NA	NA	116661198	116664747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663775_116663957_116664664
ENSMUSG00000033985.18_116661199_116664803_1	chr4	+	2101	8	NIC	ENSMUSG00000033985.18	novel	2430	9	NA	NA	32239	1650	intron_retention	FALSE	non_canonical	0	0	junction_1	0	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTCTGGGTCCCGTAGGG	9677	False	NA	NA	False	NA	NA	NA	116661198	116664803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116664002_116664664
ENSMUSG00000033987.17_117896478_117914837_1	chr11	-	1122	4	NIC	ENSMUSG00000033987.17	novel	14889	81	NA	NA	65183	16071	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGTGGTGAGGAAGACC	NA	False	NA	NA	False	NA	NA	NA	117914837	117896477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_117896718_117905399_117905549_117910432_117910559_117914230
ENSMUSG00000033991.10_76328544_76336829_2	chr13	+	756	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	0	686	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	99.1476172179645	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTATATTATTAGTAT	NA	False	NA	17	True	AATAAA	-18	NA	76328543	76336829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_76328672_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ENSMUSG00000033991.10_76328544_76336829_3	chr13	+	720	5	FSM	ENSMUSG00000033991.10	ENSMUST00000223902.2	2116	5	0	1396	0	686	multi-exon	FALSE	canonical	0	0	junction_1	121.425903332032	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTATATTATTAGTAT	NA	False	NA	17	True	AATAAA	-18	NA	76328543	76336829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_76328636_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ENSMUSG00000033991.10_76328544_76338047_1	chr13	+	1974	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	0	-178	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	99.1476172179645	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATACTCAGTATTTCATT	NA	False	NA	6	True	ATTAAA	-18	NA	76328543	76338047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_76328672_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ENSMUSG00000033998.10_126722175_126757424_1	chr8	+	1969	3	FSM	ENSMUSG00000033998.10	ENSMUST00000046765.10	2235	3	266	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	9	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGGTTTATTACAACT	NA	False	NA	21	True	AATAAA	-18	NA	126722174	126757424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_126722554_126751750_126752147_126756230
ENSMUSG00000034022.9_76460605_76480016_1	chr15	-	1993	15	NIC	ENSMUSG00000034022.9	novel	1433	12	NA	NA	882	19398	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTTGCGCACCGGCCCAC	NA	False	NA	NA	False	NA	NA	NA	76480016	76460604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ENSMUSG00000034024.9_116886906_116899280_1	chr10	-	2175	15	ISM	ENSMUSG00000034024.9	ENSMUST00000047672.9	1959	16	439	0	0	0	3prime_fragment	FALSE	canonical	3	1936	junction_8	214.938778659014	1617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	116899280	116886905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880
ENSMUSG00000034024.9_116886906_116899280_2	chr10	-	2065	16	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_5	784.170967752994	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	116899280	116886905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891136_116891940_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899064
ENSMUSG00000034024.9_116886906_116899280_3	chr10	-	2066	16	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	239	junction_15	561.749291647677	1601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	116899280	116886905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899064
ENSMUSG00000034024.9_116886906_116899719_1	chr10	-	1025	9	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	748.442215538381	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	116899719	116886905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_116887075_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ENSMUSG00000034024.9_116886906_116899719_10	chr10	-	1948	16	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	619.556386098598	4181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	116899719	116886905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890875_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ENSMUSG00000034024.9_116886906_116899719_2	chr10	-	1958	16	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	620.004279555123	5583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	116899719	116886905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897309_116897403_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ENSMUSG00000034024.9_116886906_116899719_3	chr10	-	1679	13	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	686.744716438034	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	116899719	116886905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897460_116899610
ENSMUSG00000034024.9_116886906_116899719_4	chr10	-	928	8	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	797.335895725412	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	116899719	116886905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_116887075_116896548_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ENSMUSG00000034024.9_116886906_116899719_5	chr10	-	1952	16	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	613.701628553232	6516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	116899719	116886905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893085_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ENSMUSG00000034024.9_116886906_116899719_6	chr10	-	1958	16	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	620.113430484026	10231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	116899719	116886905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891136_116891940_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ENSMUSG00000034024.9_116886906_116899719_7	chr10	-	1951	16	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	599.879343423881	4756	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	116899719	116886905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_116887182_116888920_116889055_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ENSMUSG00000034024.9_116886906_116899719_8	chr10	-	2053	15	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	1936	junction_8	235.925154596598	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	116899719	116886905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ENSMUSG00000034024.9_116886906_116899719_9	chr10	-	1794	16	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	610.171851930986	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	116899719	116886905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_116887094_116888997_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ENSMUSG00000034042.17_116414855_116450901_2	chr4	+	3410	12	FSM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	0	178	0	-178	multi-exon	FALSE	canonical	3	268	junction_2	28.7128847743677	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTCTTGTGTAAGA	NA	False	NA	11	True	AATAAA	-15	NA	116414854	116450901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ENSMUSG00000034083.17_91855056_91876576_1	chr6	+	1482	11	FSM	ENSMUSG00000034083.17	ENSMUST00000037783.7	1752	11	22	248	0	-248	multi-exon	FALSE	canonical	3	160	junction_7	17.7876361554873	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCTGGTTGTATTTGTC	NA	False	NA	11	True	TATAAA	-21	NA	91855055	91876576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91870386_91870482_91872194_91872328_91875127_91875281_91876272
ENSMUSG00000034108.7_4875394_4889326_1	chr19	-	962	8	NIC	ENSMUSG00000034108.7	novel	1067	8	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	206.828727330078	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889326	4875393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883476_4884200_4884339_4888858_4888932_4889224
ENSMUSG00000034126.6_87194492_87211497_1	chr12	-	1588	8	NIC	ENSMUSG00000034126.6	novel	3855	9	NA	NA	-16755	-22605	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1482	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGCCCCCGCCCCCTGA	NA	False	NA	NA	False	NA	NA	NA	87211497	87194491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_87194619_87204666_87204719_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUSG00000034126.6_87194492_87211497_2	chr12	-	2955	8	NIC	ENSMUSG00000034126.6	novel	3855	9	NA	NA	-16755	-22605	intron_retention	FALSE	non_canonical	0	0	junction_1	0	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGCCCCCGCCCCCTGA	NA	False	NA	NA	False	NA	NA	NA	87211497	87194491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUSG00000034152.7_74320118_74356828_1	chr13	-	2411	13	FSM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	0	2511	0	0	multi-exon	FALSE	canonical	3	174	junction_12	37.5695651055774	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTAGGTGCTTGGTGTG	7173	False	NA	-11	True	ATTAAA	-11	NA	74356828	74320117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
ENSMUSG00000034152.7_74320118_74356828_2	chr13	-	3246	13	NIC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_12	65.7558615891643	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTAGGTGCTTGGTGTG	7173	False	NA	-11	True	ATTAAA	-11	NA	74356828	74320117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74355941
ENSMUSG00000034152.7_74320257_74356828_1	chr13	-	2272	13	FSM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	0	2650	0	0	multi-exon	FALSE	canonical	3	174	junction_12	37.5695651055774	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGTACCCATCTTCAAG	7173	False	NA	NA	False	NA	NA	NA	74356828	74320256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
ENSMUSG00000034157.13_86994170_87010581_1	chr12	+	2490	4	FSM	ENSMUSG00000034157.13	ENSMUST00000187814.7	4098	4	53	1555	0	0	multi-exon	FALSE	canonical	3	99	junction_3	3.2659863237109	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGATCCTTCCCTGTT	NA	False	NA	8	True	AATAAA	-20	NA	86994169	87010581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_86994274_86999517_86999706_87007045_87007216_87008553
ENSMUSG00000034160.14_100683700_100696483_2	chrX	+	1392	4	FSM	ENSMUSG00000034160.14	ENSMUST00000150161.8	3087	4	-14	1709	0	0	multi-exon	FALSE	canonical	3	215	junction_1	65.0743164901996	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	100683699	100696483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745
ENSMUSG00000034165.17_47904395_47909637_1	chr17	+	1000	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	0	977	0	0	multi-exon	FALSE	canonical	3	3602	junction_2	267.432701814868	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGCAGCCAGGGGCCCA	NA	False	NA	NA	False	NA	NA	NA	47904394	47909637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000034165.17_47904395_47910019_1	chr17	+	1382	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	0	595	0	0	multi-exon	FALSE	canonical	3	3602	junction_2	267.432701814868	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCCAACCTTCTCAGTT	NA	False	NA	NA	False	NA	NA	NA	47904394	47910019	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000034165.17_47904924_47910614_1	chr17	+	1686	5	NNC	ENSMUSG00000034165.17	novel	464	3	NA	NA	-314	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	1731.52207248421	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47904923	47910614	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_47905016_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000034165.17_47908089_47910614_1	chr17	+	1451	4	NIC	ENSMUSG00000034165.17	novel	336	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_1	1894.33911078948	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47908088	47910614	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_47908162_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000034165.17_47908089_47910614_2	chr17	+	1392	4	NNC	ENSMUSG00000034165.17	novel	336	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	143	junction_1	1892.45349275014	641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47908088	47910614	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_47908103_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000034175.14_5019689_5049067_1	chr11	+	2389	17	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-29237	-1440	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCCCTAGGCGCCGCAC	6998	False	NA	NA	False	NA	NA	NA	5019688	5049067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ENSMUSG00000034175.14_5019897_5049067_1	chr11	+	2181	17	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-29029	-1440	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCCCTAGGCGCCGCAC	7206	False	NA	NA	False	NA	NA	NA	5019896	5049067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ENSMUSG00000034175.14_5031151_5049067_1	chr11	+	2122	8	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-17775	-1440	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCCCTAGGCGCCGCAC	NA	False	NA	NA	False	NA	NA	NA	5031150	5049067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ENSMUSG00000034187.19_103773411_103844850_1	chr11	-	1145	9	FSM	ENSMUSG00000034187.19	ENSMUST00000145126.8	3212	9	0	2067	0	-2067	multi-exon	FALSE	canonical	3	278	junction_2	26.9973957077345	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCTGGAGCAGTAGCTC	NA	False	NA	NA	False	AATAAA	-18	NA	103844850	103773410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ENSMUSG00000034192.6_91493029_91499607_1	chr6	+	689	4	NNC	ENSMUSG00000034192.6	novel	743	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	1025.82303000512	7074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTAATGTGTCT	NA	False	NA	47	True	ATTAAA	-23	NA	91493028	91499607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_91493061_91493964_91494141_91496530_91496627_91499222
ENSMUSG00000034192.6_91493029_91499607_2	chr6	+	340	3	NNC	ENSMUSG00000034192.6	novel	743	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	742	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTAATGTGTCT	NA	False	NA	47	True	ATTAAA	-23	NA	91493028	91499607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_91493061_91494029_91494145_91499414
ENSMUSG00000034192.6_91493029_91499607_3	chr6	+	554	5	NNC	ENSMUSG00000034192.6	novel	743	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	893.227994411281	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTAATGTGTCT	NA	False	NA	47	True	ATTAAA	-23	NA	91493028	91499607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222_91499436_91499505
ENSMUSG00000034192.6_91493029_91499607_4	chr6	+	618	4	NNC	ENSMUSG00000034192.6	novel	743	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_1	1022.6176650581	5942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTAATGTGTCT	NA	False	NA	47	True	ATTAAA	-23	NA	91493028	91499607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_91493061_91494035_91494141_91496530_91496627_91499222
ENSMUSG00000034192.6_91493029_91499607_5	chr6	+	294	4	NNC	ENSMUSG00000034192.6	novel	743	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	997.49163182232	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTAATGTGTCT	NA	False	NA	47	True	ATTAAA	-23	NA	91493028	91499607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_91493061_91494029_91494141_91496530_91496579_91499504
ENSMUSG00000034192.6_91493029_91499607_6	chr6	+	1508	4	NNC	ENSMUSG00000034192.6	novel	743	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1030.86123648573	2198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTAATGTGTCT	NA	False	NA	47	True	ATTAAA	-23	NA	91493028	91499607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_91493654_91493738_91494141_91496530_91496627_91499222
ENSMUSG00000034192.6_91493029_91499607_7	chr6	+	539	5	NNC	ENSMUSG00000034192.6	novel	743	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	893.227994411281	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTAATGTGTCT	NA	False	NA	47	True	ATTAAA	-23	NA	91493028	91499607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222_91499436_91499520
ENSMUSG00000034203.9_91441258_91450431_1	chr6	-	1271	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	97	2104	0	-2104	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	3031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATGGCTTTTTTTTC	NA	False	NA	-1	True	ATTAAA	-21	NA	91450431	91441257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_91442296_91444664_91444764_91450297
ENSMUSG00000034203.9_91441604_91450431_1	chr6	-	925	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	97	2450	0	-2450	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAGAGTGGGTCCATTC	NA	False	NA	-4	True	AGTAAA	-16	NA	91450431	91441603	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_91442296_91444664_91444764_91450297
ENSMUSG00000034203.9_91441804_91450431_1	chr6	-	725	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	97	2650	0	-2650	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCACTCCTGGATGTACTA	NA	False	NA	NA	False	CATAAA	-18	NA	91450431	91441803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_91442296_91444664_91444764_91450297
ENSMUSG00000034206.16_36832148_36837953_2	chr16	+	978	4	ISM	ENSMUSG00000034206.16	ENSMUST00000071452.12	7290	25	0	77401	0	1	5prime_fragment	FALSE	canonical	3	20	junction_3	9.03081145609604	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTGTTTA	3748	False	NA	NA	False	ATTAAA	-17	NA	36832147	36837953	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_36832422_36833468_36833649_36835440_36835572_36837560
ENSMUSG00000034211.15_129792598_129795354_1	chr5	+	611	4	FSM	ENSMUSG00000034211.15	ENSMUST00000042191.12	832	4	31	190	0	0	multi-exon	FALSE	canonical	3	460	junction_1	196.309845793724	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTCTCTGAACTGAA	791	False	NA	39	True	AGTAAA	-34	NA	129792597	129795354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129792614_129792747_129792828_129793790_129793931_129794979
ENSMUSG00000034211.15_129792598_129795354_2	chr5	+	758	4	FSM	ENSMUSG00000034211.15	ENSMUST00000119576.8	5061	4	37	4266	0	0	multi-exon	FALSE	canonical	3	150	junction_2	308.575220435256	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTCTCTGAACTGAA	791	False	NA	39	True	AGTAAA	-34	NA	129792597	129795354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129792614_129792747_129792975_129793790_129793931_129794979
ENSMUSG00000034211.15_129792598_129795354_3	chr5	+	706	4	FSM	ENSMUSG00000034211.15	ENSMUST00000118420.8	843	4	30	107	0	0	multi-exon	FALSE	canonical	3	33	junction_2	354.785381134379	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTCTCTGAACTGAA	791	False	NA	39	True	AGTAAA	-34	NA	129792597	129795354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129792614_129792747_129792923_129793790_129793931_129794979
ENSMUSG00000034211.15_129792598_129795354_4	chr5	+	531	3	NIC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_1	423.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTCTCTGAACTGAA	791	False	NA	39	True	AGTAAA	-34	NA	129792597	129795354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_129792614_129793790_129793931_129794979
ENSMUSG00000034211.15_129792598_129795354_5	chr5	+	1574	3	FSM	ENSMUSG00000034211.15	ENSMUST00000121339.2	2182	3	23	585	0	0	multi-exon	FALSE	canonical	3	460	junction_1	221	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTCTCTGAACTGAA	791	False	NA	39	True	AGTAAA	-34	NA	129792597	129795354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129792614_129792747_129793931_129794979
ENSMUSG00000034211.15_129792598_129795354_6	chr5	+	742	4	NIC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	350.330637477734	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTCTCTGAACTGAA	791	False	NA	39	True	AGTAAA	-34	NA	129792597	129795354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_129792614_129792747_129792959_129793790_129793931_129794979
ENSMUSG00000034211.15_129792598_129795545_1	chr5	+	949	4	FSM	ENSMUSG00000034211.15	ENSMUST00000119576.8	5061	4	37	4075	0	1	multi-exon	FALSE	canonical	3	150	junction_2	308.575220435256	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	791	False	NA	24	True	CATAAA	-13	NA	129792597	129795545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129792614_129792747_129792975_129793790_129793931_129794979
ENSMUSG00000034211.15_129792598_129795545_2	chr5	+	722	3	NIC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	55	junction_1	423.5	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	791	False	NA	24	True	CATAAA	-13	NA	129792597	129795545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_129792614_129793790_129793931_129794979
ENSMUSG00000034211.15_129792598_129795545_3	chr5	+	933	4	NIC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	350.330637477734	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	791	False	NA	24	True	CATAAA	-13	NA	129792597	129795545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_129792614_129792747_129792959_129793790_129793931_129794979
ENSMUSG00000034211.15_129792598_129795545_4	chr5	+	1650	4	NNC	ENSMUSG00000034211.15	novel	1208	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	356.816790835608	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	791	False	NA	24	True	CATAAA	-13	NA	129792597	129795545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_129792614_129792747_129793676_129793790_129793931_129794979
ENSMUSG00000034211.15_129792598_129795545_5	chr5	+	1765	3	FSM	ENSMUSG00000034211.15	ENSMUST00000121339.2	2182	3	23	394	0	1	multi-exon	FALSE	canonical	3	460	junction_1	221	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	791	False	NA	24	True	CATAAA	-13	NA	129792597	129795545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129792614_129792747_129793931_129794979
ENSMUSG00000034252.15_80021188_80051453_1	chr9	+	2863	16	ISM	ENSMUSG00000034252.15	ENSMUST00000176607.8	3319	18	10734	-459	-116	0	3prime_fragment	FALSE	canonical	3	313	junction_3	30.8216374213528	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	80021187	80051453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ENSMUSG00000034259.9_76211665_76213960_1	chr15	+	815	3	FSM	ENSMUSG00000034259.9	ENSMUST00000230512.2	1728	3	0	913	0	665	multi-exon	FALSE	canonical	3	25	junction_1	318	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACCTTACTGTACAGCA	947	False	NA	13	True	AATAAA	-19	NA	76211664	76213960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76211868_76213229_76213437_76213555
ENSMUSG00000034259.9_76211791_76213960_1	chr15	+	689	3	FSM	ENSMUSG00000034259.9	ENSMUST00000230512.2	1728	3	126	913	0	665	multi-exon	FALSE	canonical	3	25	junction_1	318	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACCTTACTGTACAGCA	1073	False	NA	13	True	AATAAA	-19	NA	76211790	76213960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76211868_76213229_76213437_76213555
ENSMUSG00000034274.12_4845343_4878865_1	chr11	+	2230	20	NNC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	68.2289205217836	1321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGTTTGTAGCTCCTT	NA	False	NA	21	True	ATTAAA	-18	NA	4845342	4878865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862785_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ENSMUSG00000034278.4_119002981_119039276_1	chr2	-	1241	12	NNC	ENSMUSG00000034278.4	novel	1008	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	131.958044922751	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTACTTTTCTTCCTCTTG	NA	False	NA	-4	True	AATAAA	-15	NA	119039276	119002980	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_119003167_119005391_119005623_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011447_119014073_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
ENSMUSG00000034285.16_4823999_4843654_1	chr11	+	1261	9	NIC	ENSMUSG00000034285.16	novel	1566	11	NA	NA	0	37	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	409.499065169873	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGAAGTCGTGACAGTCA	NA	False	NA	NA	False	AATAAA	-25	NA	4823998	4843654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ENSMUSG00000034285.16_4823999_4844055_1	chr11	+	1724	10	NNC	ENSMUSG00000034285.16	novel	1566	11	NA	NA	0	-145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	403.234178200628	2470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTGCAGAAACACTAG	NA	False	NA	NA	False	NA	NA	NA	4823998	4844055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841411_4841487_4843119
ENSMUSG00000034285.16_4823999_4844055_2	chr11	+	1733	10	FSM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	48	145	0	-145	multi-exon	FALSE	canonical	3	1103	junction_6	68.3294488507475	3781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTGCAGAAACACTAG	NA	False	NA	NA	False	NA	NA	NA	4823998	4844055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ENSMUSG00000034285.16_4823999_4844201_1	chr11	+	1870	10	NNC	ENSMUSG00000034285.16	novel	1566	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	403.234178200628	4642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGTGGTGTTGTCTTCAT	NA	False	NA	12	True	ATTAAA	-12	NA	4823998	4844201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841411_4841487_4843119
ENSMUSG00000034285.16_4823999_4844201_2	chr11	+	1808	9	NIC	ENSMUSG00000034285.16	novel	1566	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	409.499065169873	2435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGTGGTGTTGTCTTCAT	NA	False	NA	12	True	ATTAAA	-12	NA	4823998	4844201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ENSMUSG00000034311.4_99666492_99669541_1	chrX	+	1063	7	NIC	ENSMUSG00000034311.4	novel	4983	30	NA	NA	-2851	-10372	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGATGCTCCTACCACCCT	NA	False	NA	NA	False	NA	NA	NA	99666491	99669541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669421
ENSMUSG00000034311.4_99666492_99669541_2	chrX	+	1366	5	NIC	ENSMUSG00000034311.4	novel	4983	30	NA	NA	-2851	-10372	intron_retention	FALSE	non_canonical	0	0	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGATGCTCCTACCACCCT	NA	False	NA	NA	False	NA	NA	NA	99666491	99669541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
ENSMUSG00000034311.4_99669758_99770820_1	chrX	+	4568	30	FSM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	415	0	415	0	multi-exon	FALSE	canonical	3	204	junction_20	20.3345386022518	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGGAGATCCTTCTAT	NA	False	NA	18	True	AATAAA	-22	NA	99669757	99770820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
ENSMUSG00000034321.15_41912005_41921742_1	chr19	-	1020	8	NNC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_4	292.949253807076	2381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACTGGAAAAAATTCTTT	NA	False	NA	-33	True	TATAAA	-22	NA	41921742	41912004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915000_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ENSMUSG00000034321.15_41912357_41921742_1	chr19	-	673	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-7	352	-5	-352	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCAAGATGCAATGGTCT	NA	False	NA	-12	True	TATAAA	-5	NA	41921742	41912356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ENSMUSG00000034329.17_85952028_86091999_1	chr11	-	3847	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	20	3064	-7	-3064	multi-exon	FALSE	canonical	3	63	junction_1	12.1006856333757	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATTCTTCATTGGAAT	NA	False	NA	-24	True	GATAAA	-22	NA	86091999	85952027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ENSMUSG00000034329.17_85952794_86091999_1	chr11	-	3081	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	20	3830	-7	-3830	multi-exon	FALSE	canonical	3	63	junction_1	12.1006856333757	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTGGAAAGCAAACAGAG	NA	False	NA	NA	False	AATGAA	-39	NA	86091999	85952793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ENSMUSG00000034330.11_118306324_118361881_1	chr8	+	3338	24	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	81294	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	35.9048311486207	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTCTGTACCTGATCTGT	NA	False	NA	11	True	AATAAA	-23	NA	118306323	118361881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_118306416_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ENSMUSG00000034330.11_118327804_118361881_1	chr8	+	1869	12	ISM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	102774	0	102774	0	3prime_fragment	FALSE	canonical	3	117	junction_1	25.4749917882532	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTCTGTACCTGATCTGT	NA	False	NA	11	True	AATAAA	-23	NA	118327803	118361881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ENSMUSG00000034341.18_115969399_115977798_1	chr11	-	1668	7	FSM	ENSMUSG00000034341.18	ENSMUST00000106444.4	1012	7	23	-679	0	0	multi-exon	FALSE	canonical	3	34	junction_3	412.44046708451	2050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTCTGACTCTTGTGTG	NA	False	NA	-11	True	AGTAAA	-16	NA	115977798	115969398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ENSMUSG00000034343.15_91178059_91213649_2	chr1	+	1217	9	NIC	ENSMUSG00000034343.15	novel	1363	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	108.195136212309	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGCTTTAATTATTTT	337	False	NA	NA	False	NA	NA	NA	91178058	91213649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_91178160_91181981_91182116_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUSG00000034343.15_91178059_91213649_4	chr1	+	1315	11	FSM	ENSMUSG00000034343.15	ENSMUST00000059743.12	1154	11	26	-187	0	0	multi-exon	FALSE	canonical	3	14	junction_1	126.177692164661	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGCTTTAATTATTTT	337	False	NA	NA	False	NA	NA	NA	91178058	91213649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_91178160_91181481_91181550_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUSG00000034345.15_6130112_6135109_1	chr17	+	511	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	51	1683	0	-298	multi-exon	FALSE	canonical	3	932	junction_1	74.5	2378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTTAGCTGCAATTTGG	1741	False	NA	31	True	ATTAAA	-21	NA	6130111	6135109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_6130187_6131076_6131150_6134746
ENSMUSG00000034345.15_6130112_6135407_1	chr17	+	809	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	51	1385	0	0	multi-exon	FALSE	canonical	3	932	junction_1	74.5	3879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTTTTACCCTGGGTAT	1741	False	NA	29	True	ATTAAA	-33	NA	6130111	6135407	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_6130187_6131076_6131150_6134746
ENSMUSG00000034345.15_6130162_6135167_1	chr17	+	519	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	101	1625	-43	-240	multi-exon	FALSE	canonical	3	932	junction_1	74.5	1811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCTGGTGAGATGGCTC	1791	False	NA	89	True	ATTAAA	-13	NA	6130161	6135167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_6130187_6131076_6131150_6134746
ENSMUSG00000034349.15_68912324_68923466_1	chr3	+	827	6	ISM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	253	18490	0	-1975	5prime_fragment	FALSE	canonical	3	521	junction_3	64.9412041773172	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGAACATGATGAAGGTA	NA	False	NA	NA	False	NA	NA	NA	68912323	68923466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425
ENSMUSG00000034371.10_10582951_10607186_1	chr19	-	4202	27	NIC	ENSMUSG00000034371.10	novel	2516	18	NA	NA	-24168	-6555	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	3769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGACACGTTGCAGGCCA	NA	False	NA	NA	False	NA	NA	NA	10607186	10582950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000034371.10_10582951_10607186_2	chr19	-	4196	27	NNC	ENSMUSG00000034371.10	novel	2516	18	NA	NA	-24168	-6555	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3030	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGACACGTTGCAGGCCA	NA	False	NA	NA	False	NA	NA	NA	10607186	10582950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599343_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000034371.10_10582951_10607186_3	chr19	-	4197	27	NNC	ENSMUSG00000034371.10	novel	2516	18	NA	NA	-24168	-6555	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGACACGTTGCAGGCCA	NA	False	NA	NA	False	NA	NA	NA	10607186	10582950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590241_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000034371.10_10582951_10607186_4	chr19	-	4238	28	NIC	ENSMUSG00000034371.10	novel	2516	18	NA	NA	-24168	-6555	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGACACGTTGCAGGCCA	NA	False	NA	NA	False	NA	NA	NA	10607186	10582950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10587192_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000034377.11_6171336_6172498_1	chr17	+	710	2	NNC	ENSMUSG00000034377.11	novel	789	3	NA	NA	2767	-121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	961	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTTCACTAGGATGAGG	NA	False	NA	NA	False	NA	NA	NA	6171335	6172498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_6171881_6172333
ENSMUSG00000034377.11_6171336_6172498_2	chr17	+	688	2	NNC	ENSMUSG00000034377.11	novel	789	3	NA	NA	2767	-121	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	975	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTTCACTAGGATGAGG	NA	False	NA	NA	False	NA	NA	NA	6171335	6172498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_6171867_6172341
ENSMUSG00000034377.11_6171336_6172498_3	chr17	+	701	2	NNC	ENSMUSG00000034377.11	novel	789	3	NA	NA	2767	-121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1169	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTTCACTAGGATGAGG	NA	False	NA	NA	False	NA	NA	NA	6171335	6172498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_6171866_6172327
ENSMUSG00000034377.11_6171336_6172498_4	chr17	+	716	2	NNC	ENSMUSG00000034377.11	novel	789	3	NA	NA	2767	-121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1064	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTTCACTAGGATGAGG	NA	False	NA	NA	False	NA	NA	NA	6171335	6172498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_6171881_6172327
ENSMUSG00000034377.11_6171336_6172498_5	chr17	+	601	2	NNC	ENSMUSG00000034377.11	novel	789	3	NA	NA	2767	-121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	458	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTTCACTAGGATGAGG	NA	False	NA	NA	False	NA	NA	NA	6171335	6172498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_6171881_6172442
ENSMUSG00000034377.11_6171336_6172498_6	chr17	+	711	2	NNC	ENSMUSG00000034377.11	novel	789	3	NA	NA	2767	-121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1069	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTTCACTAGGATGAGG	NA	False	NA	NA	False	NA	NA	NA	6171335	6172498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_6171867_6172318
ENSMUSG00000034379.10_35864216_35891906_1	chr16	+	545	4	Genic_Genomic	ENSMUSG00000034379.10	novel	2739	1	NA	NA	2656	27608	multi-exon	FALSE	non_canonical	0	0	junction_1	0	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGGCCGCGGCGCTGGCGC	7034	False	NA	NA	False	NA	NA	NA	35864215	35891906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_35864462_35870211_35870321_35872655_35872779_35891839
ENSMUSG00000034391.13_84952734_84999598_1	chr18	+	2077	10	NNC	ENSMUSG00000034391.13	novel	1910	10	NA	NA	-173	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	268.053108797123	3291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGGTGTCTTATTT	627	False	NA	26	True	AATAAA	-15	NA	84952733	84999598	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_84953306_84975450_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
ENSMUSG00000034391.13_84952734_84999598_2	chr18	+	2083	10	FSM	ENSMUSG00000034391.13	ENSMUST00000224467.3	1910	10	-173	0	-173	0	multi-exon	FALSE	canonical	3	723	junction_3	71.0602248487546	3340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGGTGTCTTATTT	627	False	NA	26	True	AATAAA	-15	NA	84952733	84999598	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
ENSMUSG00000034391.13_84953153_84999598_1	chr18	+	1613	10	NNC	ENSMUSG00000034391.13	novel	1910	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	267.932873480202	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGGTGTCTTATTT	1046	False	NA	26	True	AATAAA	-15	NA	84953152	84999598	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983660_84995491_84995617_84999246
ENSMUSG00000034391.13_84953153_84999598_3	chr18	+	1658	10	NNC	ENSMUSG00000034391.13	novel	1910	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	268.053108797123	2702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGGTGTCTTATTT	1046	False	NA	26	True	AATAAA	-15	NA	84953152	84999598	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_84953306_84975450_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
ENSMUSG00000034401.17_111577235_111685626_1	chr4	+	1699	13	FSM	ENSMUSG00000034401.17	ENSMUST00000038868.14	2466	13	54	713	0	227	multi-exon	FALSE	canonical	3	90	junction_2	15.2103309190388	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTATTTGTACGCCTTTC	NA	False	NA	NA	False	AATGAA	-15	NA	111577234	111685626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
ENSMUSG00000034403.17_98509720_98514294_1	chrX	-	1733	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113790.8	2108	3	-1	376	-1	0	multi-exon	FALSE	canonical	3	92	junction_1	143.5	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAATGGCATCATTTGG	NA	False	NA	-4	True	ATTAAA	-22	NA	98514294	98509719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_98511189_98511728_98511921_98514222
ENSMUSG00000034403.17_98510056_98514294_1	chrX	-	1397	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113790.8	2108	3	-1	712	-1	-304	multi-exon	FALSE	canonical	3	92	junction_1	143.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGATTCCTTGTGATT	NA	False	NA	NA	False	ACTAAA	-1	NA	98514294	98510055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_98511189_98511728_98511921_98514222
ENSMUSG00000034416.19_117736062_117743750_1	chr8	-	1192	5	ISM	ENSMUSG00000034416.19	ENSMUST00000162080.2	1716	8	7084	0	7084	0	3prime_fragment	FALSE	canonical	3	20	junction_4	5.53962995154008	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGGCATGTTCTTATTT	4507	False	NA	NA	False	TATAAA	-19	NA	117743750	117736061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_117736470_117738236_117738365_117740602_117740737_117741601_117741930_117743556
ENSMUSG00000034424.6_117708711_117720276_1	chr8	-	1281	5	FSM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	0	162	0	-162	multi-exon	FALSE	canonical	3	1952	junction_3	87.9982244139051	7622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	-9	True	AATAAA	-16	NA	117720276	117708710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117720026
ENSMUSG00000034424.6_117708711_117720276_2	chr8	-	1201	4	NIC	ENSMUSG00000034424.6	novel	1443	5	NA	NA	0	-162	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	974.020647739165	4812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	-9	True	AATAAA	-16	NA	117720276	117708710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_117709466_117710546_117710679_117714051_117714116_117720026
ENSMUSG00000034429.16_75841156_75847595_2	chr15	+	1616	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109966.8	1803	4	184	3	0	0	multi-exon	FALSE	canonical	3	24	junction_3	7.71722460186015	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGAAGCCTGTTCTTCA	NA	False	NA	8	True	AATAAA	-13	NA	75841155	75847595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_75841254_75844930_75845058_75845390_75845505_75846318
ENSMUSG00000034432.12_90531221_90540849_1	chr1	+	1455	8	NNC	ENSMUSG00000034432.12	novel	2287	8	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	260.130579454525	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCTCTAGAAATTTCAT	NA	False	NA	28	True	AATAAA	-33	NA	90531220	90540849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_90531278_90532124_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
ENSMUSG00000034432.12_90531221_90540849_2	chr1	+	1555	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	518	214	0	3	multi-exon	FALSE	canonical	3	708	junction_7	24.8185250100297	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCTCTAGAAATTTCAT	NA	False	NA	28	True	AATAAA	-33	NA	90531220	90540849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
ENSMUSG00000034432.12_90531221_90541063_1	chr1	+	1769	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	518	0	0	0	multi-exon	FALSE	canonical	3	708	junction_7	24.8185250100297	2129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTAGTGGGTTACCTAA	NA	False	NA	21	True	ATTAAA	-22	NA	90531220	90541063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
ENSMUSG00000034442.12_73327255_73333483_1	chr12	-	1596	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	0	470	0	0	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACACAGATATTTGTTA	NA	False	NA	-95	True	NA	NA	NA	73333483	73327254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
ENSMUSG00000034442.12_73327255_73333483_2	chr12	-	1590	5	NNC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	35.4118624192515	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACACAGATATTTGTTA	NA	False	NA	-95	True	NA	NA	NA	73333483	73327254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_73327407_73327778_73328431_73329385_73329505_73331408_73332050_73333457
ENSMUSG00000034445.9_10554815_10567194_2	chr19	+	2852	8	FSM	ENSMUSG00000034445.9	ENSMUST00000237814.2	3130	8	279	-1	0	1	multi-exon	FALSE	canonical	3	46	junction_1	19.4768308196049	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	15	True	ATTAAA	-18	NA	10554814	10567194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ENSMUSG00000034445.9_10554815_10567194_3	chr19	+	2759	7	FSM	ENSMUSG00000034445.9	ENSMUST00000168445.2	1474	7	-3	-1282	0	1	multi-exon	FALSE	canonical	3	16	junction_1	29.6516816086748	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	15	True	ATTAAA	-18	NA	10554814	10567194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10555448_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ENSMUSG00000034445.9_10569564_10582773_2	chr19	+	2459	18	Fusion	ENSMUSG00000024740.11_ENSMUSG00000034445.9	novel	4459	27	NA	NA	-13127	-3060	multi-exon	FALSE	non_canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTCTCGCTCTCATCCG	NA	False	NA	NA	False	NA	NA	NA	10569563	10582773	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr19_+_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582582
ENSMUSG00000034449.8_84711552_84719843_1	chr11	-	1381	7	NIC	ENSMUSG00000034449.8	novel	1254	7	NA	NA	-23	130	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	15.7585955380971	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACCTTCAGAAGTATCT	NA	False	NA	NA	False	ATTAAA	-19	NA	84719843	84711551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_84712128_84712228_84712295_84712490_84712584_84713136_84713267_84713897_84713993_84716193_84716348_84719576
ENSMUSG00000034453.9_84458156_84562089_1	chr10	+	4022	28	FSM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	0	953	0	-953	multi-exon	FALSE	canonical	3	154	junction_10	22.7726281441689	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGGTTTGTTTATGTTA	NA	False	NA	7	True	NA	NA	NA	84458155	84562089	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ENSMUSG00000034457.11_96379146_96420786_2	chrX	-	3016	8	FSM	ENSMUSG00000034457.11	ENSMUST00000037353.10	4752	8	36	1700	-8	1598	multi-exon	FALSE	canonical	3	19	junction_1	34.3130843134516	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAAGCCAGGCTACAGT	NA	False	NA	NA	False	NA	NA	NA	96420786	96379145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_96381057_96382408_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
ENSMUSG00000034484.9_53309431_53353577_1	chr18	+	1664	15	FSM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	43	360	0	-360	multi-exon	FALSE	canonical	0	0	junction_13	254.699312515598	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGGGTTTTTTATA	NA	False	NA	NA	False	AATAAA	-20	NA	53309430	53353577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ENSMUSG00000034493.2_3914009_3929221_1	chr11	-	2094	15	Genic_Genomic	ENSMUSG00000034493.2	novel	1220	2	NA	NA	-2443	-26468	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2765	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACACCAGAGCTACTTC	2819	False	NA	NA	False	NA	NA	NA	3929221	3914008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_-_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUSG00000034520.15_102690405_102710005_1	chr11	-	1813	3	FSM	ENSMUSG00000034520.15	ENSMUST00000131164.2	247	3	31	-1597	0	0	multi-exon	FALSE	canonical	3	62	junction_2	360	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	NA	False	NA	-8	True	ATTAAA	-22	NA	102710005	102690404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102692022_102693666_102693743_102709885
ENSMUSG00000034544.18_66893018_67263891_2	chr3	+	1374	10	FSM	ENSMUSG00000034544.18	ENSMUST00000065074.14	3224	10	13	1837	0	0	multi-exon	FALSE	canonical	3	299	junction_4	31.3821526695165	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGTGTTGAAATAAATG	NA	False	NA	NA	False	AATAAA	-16	NA	66893017	67263891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ENSMUSG00000034544.18_66893018_67264291_2	chr3	+	1774	10	FSM	ENSMUSG00000034544.18	ENSMUST00000065074.14	3224	10	13	1437	0	399	multi-exon	FALSE	canonical	3	299	junction_4	31.3821526695165	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGATTTGTATCACGCGT	NA	False	NA	14	True	AATAAA	-20	NA	66893017	67264291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ENSMUSG00000034560.7_83431348_83432337_1	chr10	+	786	2	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	9691	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAAACTGTCCTTCCAT	NA	False	NA	14	True	AATAAA	-17	NA	83431347	83432337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_83431746_83431949
ENSMUSG00000034566.11_115306515_115309344_1	chr11	-	547	5	NNC	ENSMUSG00000034566.11	novel	659	6	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1444.2389648185	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115309344	115306514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308753_115309211
ENSMUSG00000034566.11_115306515_115309344_2	chr11	-	550	5	NNC	ENSMUSG00000034566.11	novel	659	6	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	1410.87798462518	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115309344	115306514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_115306706_115306840_115306898_115307678_115307751_115308664_115308762_115309211
ENSMUSG00000034566.11_115306515_115310764_1	chr11	-	603	6	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1306.77741027307	4756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115310764	115306514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308753_115309200_115309343_115310717
ENSMUSG00000034566.11_115306515_115310764_2	chr11	-	587	6	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1304.73470100247	5376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115310764	115306514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_115306692_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310717
ENSMUSG00000034566.11_115306515_115310764_3	chr11	-	592	6	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1306.80765225797	4726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115310764	115306514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309334_115310717
ENSMUSG00000034566.11_115306515_115310764_4	chr11	-	595	6	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1304.73470100247	13825	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115310764	115306514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_115306700_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310717
ENSMUSG00000034566.11_115306515_115310764_5	chr11	-	737	6	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_5	1295.81085039445	2918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115310764	115306514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310581
ENSMUSG00000034566.11_115306515_115310764_6	chr11	-	124	2	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115310764	115306514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_115306592_115310717
ENSMUSG00000034566.11_115306515_115310764_7	chr11	-	586	6	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1196.90066421571	4691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115310764	115306514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_115306706_115306840_115306904_115307678_115307736_115308664_115308762_115309211_115309343_115310717
ENSMUSG00000034566.11_115306515_115310764_8	chr11	-	599	6	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1274.03981099493	8061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115310764	115306514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_115306706_115306840_115306898_115307674_115307751_115308664_115308762_115309211_115309343_115310717
ENSMUSG00000034566.11_115306515_115310764_9	chr11	-	646	7	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1527.66842133873	5615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115310764	115306514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115309524_115309570_115310717
ENSMUSG00000034566.11_115306644_115310764_1	chr11	-	472	6	FSM	ENSMUSG00000034566.11	ENSMUST00000043931.9	625	6	24	129	-21	0	multi-exon	FALSE	canonical	3	1974	junction_5	551.930285452792	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCCAGAAACCAAGCTGG	NA	False	NA	NA	False	NA	NA	NA	115310764	115306643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310717
ENSMUSG00000034595.18_36181257_36186489_1	chr17	+	1092	3	NNC	ENSMUSG00000034595.18	novel	3524	3	NA	NA	1962	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	41	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCCTTCCTTTGTTTCT	NA	False	NA	16	True	AATAAA	-23	NA	36181256	36186489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_36181334_36184617_36184832_36185688
ENSMUSG00000034601.18_71184005_71209795_1	chr12	+	2720	13	ISM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	383	80282	383	8134	5prime_fragment	FALSE	canonical	3	118	junction_6	8.91471941354422	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGGCCTCTTAGTGTGTT	NA	False	NA	NA	False	CATAAA	-19	NA	71184004	71209795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349
ENSMUSG00000034610.15_108414518_108416612_1	chr4	+	855	2	ISM	ENSMUSG00000034610.15	ENSMUST00000128042.2	587	3	1585	-361	1585	0	3prime_fragment	FALSE	canonical	3	135	junction_1	0	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAATTTGGTTAATTCAT	NA	False	NA	15	True	AATAAA	-15	NA	108414517	108416612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_108414672_108415911
ENSMUSG00000034617.8_68709482_68730243_2	chr13	-	2585	13	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_11	116.868753546684	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAAAAGAACT	NA	False	NA	-90	True	NA	NA	NA	68730243	68709481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68728669_68728835_68730183
ENSMUSG00000034617.8_68709482_68730243_3	chr13	-	3098	15	NNC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	101.650085075805	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAAAAGAACT	NA	False	NA	-90	True	NA	NA	NA	68730243	68709481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727675_68727816_68728669_68728835_68730183
ENSMUSG00000034617.8_68709855_68730243_2	chr13	-	2739	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	-3	956	-3	-373	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATAGTACTCTGCCA	NA	False	NA	NA	False	AATATA	-13	NA	68730243	68709854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ENSMUSG00000034617.8_68727591_68730243_1	chr13	-	450	3	ISM	ENSMUSG00000034617.8	ENSMUST00000223101.2	2728	14	-11	18109	-3	0	5prime_fragment	FALSE	canonical	3	370	junction_2	18.5	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGTTGCATAGGCCT	NA	False	NA	NA	False	AATATA	-16	NA	68730243	68727590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_68727816_68728669_68728835_68730183
ENSMUSG00000034620.18_121917165_121933031_1	chr10	-	1402	6	FSM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	245	3146	0	0	multi-exon	FALSE	canonical	3	258	junction_5	21.4513402844671	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATTCATAAGTGTAA	NA	False	NA	-10	True	AATAAA	-19	NA	121933031	121917164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
ENSMUSG00000034620.18_121917165_121933031_2	chr10	-	1535	6	NIC	ENSMUSG00000034620.18	novel	1546	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	112.932546238894	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATTCATAAGTGTAA	NA	False	NA	-10	True	AATAAA	-19	NA	121933031	121917164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932133_121932804
ENSMUSG00000034621.15_102369701_102447002_1	chr11	-	3888	8	FSM	ENSMUSG00000034621.15	ENSMUST00000143842.2	6871	8	23	2960	0	-1668	multi-exon	FALSE	canonical	3	114	junction_1	22.9658131018384	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCACTTCCCCAATTATG	660	False	NA	NA	False	NA	NA	NA	102447002	102369700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
ENSMUSG00000034621.15_102370692_102447002_1	chr11	-	2897	8	FSM	ENSMUSG00000034621.15	ENSMUST00000143842.2	6871	8	23	3951	0	-2659	multi-exon	FALSE	canonical	3	114	junction_1	22.9658131018384	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCGGAGTCATACAAGG	660	False	NA	NA	False	NA	NA	NA	102447002	102370691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
ENSMUSG00000034656.19_85328060_85340075_1	chr8	+	1570	5	FSM	ENSMUSG00000034656.19	ENSMUST00000141981.8	1153	5	-13	-404	0	404	multi-exon	FALSE	canonical	3	25	junction_4	8.95474734428616	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCTCAGTGTGTAAAGG	NA	False	NA	11	True	AATAAA	-17	NA	85328059	85340075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85328135_85328384_85328451_85328552_85328669_85338226_85338378_85338913
ENSMUSG00000034667.9_121425524_121464720_1	chr10	-	3722	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2483	0	intron_retention	FALSE	canonical	3	239	junction_24	221.439792262417	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCTTTTCCGGAGTTAT	9368	False	NA	NA	False	AATAAA	-21	NA	121464720	121425523	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ENSMUSG00000034681.18_24633668_24644152_1	chr17	+	1062	8	FSM	ENSMUSG00000034681.18	ENSMUST00000088512.13	1816	8	31	723	0	0	multi-exon	FALSE	canonical	3	697	junction_1	319.314188567323	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGATAAGCAGGGACATTGA	932	False	NA	NA	False	NA	NA	NA	24633667	24644152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24633709_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUSG00000034681.18_24633901_24644872_1	chr17	+	1796	7	ISM	ENSMUSG00000034681.18	ENSMUST00000234977.2	1769	8	276	3	233	0	3prime_fragment	FALSE	canonical	3	75	junction_1	542.437938078327	1867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	1165	False	NA	NA	False	AATAAA	-21	NA	24633900	24644872	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_24634137_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUSG00000034708.13_102321344_102327399_1	chr11	+	1901	13	FSM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	196	234	0	0	multi-exon	FALSE	canonical	3	528	junction_1	53.84932682959	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCTACTCATCCTGAGTC	4334	False	NA	NA	False	NA	NA	NA	102321343	102327399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ENSMUSG00000034708.13_102321344_102327633_1	chr11	+	2135	13	FSM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	196	0	0	0	multi-exon	FALSE	canonical	3	528	junction_1	53.84932682959	2236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	4334	False	NA	15	True	AATAAA	-17	NA	102321343	102327633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ENSMUSG00000034708.13_102321344_102327633_2	chr11	+	1631	9	NNC	ENSMUSG00000034708.13	novel	2331	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	221.066413946126	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	4334	False	NA	15	True	AATAAA	-17	NA	102321343	102327633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324836_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ENSMUSG00000034709.9_88837644_88857063_1	chr17	+	563	5	ISM	ENSMUSG00000034709.9	ENSMUST00000038551.8	3141	22	98	38732	0	6199	5prime_fragment	FALSE	canonical	3	65	junction_3	8.04285397107271	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCGACAAGGCAAAGCTA	NA	False	NA	NA	False	NA	NA	NA	88837643	88857063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921
ENSMUSG00000034709.9_88837644_88895795_1	chr17	+	3043	22	FSM	ENSMUSG00000034709.9	ENSMUST00000038551.8	3141	22	98	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	9.91871727497827	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCGGTCTGTGACAGTG	NA	False	NA	16	True	AATAAA	-17	NA	88837643	88895795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
ENSMUSG00000034729.17_47679823_47689606_1	chr17	+	1115	8	NIC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	734.648576267759	1902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7148	False	NA	7	True	NA	NA	NA	47679822	47689606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_47679880_47681188_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ENSMUSG00000034729.17_47679823_47689606_2	chr17	+	1004	7	NNC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	665.668502751599	1898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7148	False	NA	7	True	NA	NA	NA	47679822	47689606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_47679880_47683351_47683417_47683497_47683571_47685897_47686035_47686865_47686968_47688684_47688775_47689126
ENSMUSG00000034729.17_47679823_47689606_3	chr17	+	873	5	NIC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	699.748302963287	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7148	False	NA	7	True	NA	NA	NA	47679822	47689606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_47679880_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ENSMUSG00000034729.17_47679823_47689606_4	chr17	+	1002	7	NNC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	653.932314710186	2227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7148	False	NA	7	True	NA	NA	NA	47679822	47689606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_47679880_47683351_47683417_47683506_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ENSMUSG00000034729.17_47679823_47689606_5	chr17	+	1024	2	NNC	ENSMUSG00000034729.17	novel	469	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7148	False	NA	7	True	NA	NA	NA	47679822	47689606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_47680807_47689566
ENSMUSG00000034744.14_83772190_83779538_1	chr6	+	1174	10	NNC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.4936186246703	825	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9484	False	NA	13	True	AATAAA	-21	NA	83772189	83779538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_83772265_83773893_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUSG00000034744.14_83772190_83779538_2	chr6	+	1271	10	FSM	ENSMUSG00000034744.14	ENSMUST00000146117.8	1049	10	0	-222	0	0	multi-exon	FALSE	canonical	3	35	junction_1	70.680816193489	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9484	False	NA	13	True	AATAAA	-21	NA	83772189	83779538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83772357_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUSG00000034744.14_83772190_83779538_3	chr6	+	1145	10	FSM	ENSMUSG00000034744.14	ENSMUST00000113851.8	1323	10	180	-2	0	0	multi-exon	FALSE	canonical	3	32	junction_1	71.6054001687955	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9484	False	NA	13	True	AATAAA	-21	NA	83772189	83779538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83772231_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUSG00000034744.14_83772190_83779538_4	chr6	+	1280	10	NNC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	77.5253045108897	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9484	False	NA	13	True	AATAAA	-21	NA	83772189	83779538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_83772265_83773888_83774075_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUSG00000034744.14_83772190_83779538_5	chr6	+	1179	10	FSM	ENSMUSG00000034744.14	ENSMUST00000037376.14	1405	10	226	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	21.8281729836116	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9484	False	NA	13	True	AATAAA	-21	NA	83772189	83779538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUSG00000034748.17_81457621_81463091_1	chr10	-	1931	8	NIC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_7	72.5548349983146	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTACATTTATGTA	9772	False	NA	-11	True	AATAAA	-25	NA	81463091	81457620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81462725
ENSMUSG00000034748.17_81457621_81463415_1	chr10	-	1346	9	NIC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	72.0017360901805	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTACATTTATGTA	9874	False	NA	-11	True	AATAAA	-25	NA	81463415	81457620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_81457913_81458241_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
ENSMUSG00000034757.16_102175777_102179507_1	chr11	+	1363	4	FSM	ENSMUSG00000034757.16	ENSMUST00000036376.13	1939	4	20	556	0	470	multi-exon	FALSE	canonical	3	77	junction_1	22.5437845585479	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCCAAGATCAGTGAGAA	NA	False	NA	NA	False	NA	NA	NA	102175776	102179507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_102175915_102176489_102176545_102178133_102178698_102178901
ENSMUSG00000034758.13_81426739_81433179_1	chr10	-	1773	11	NIC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	15.7445228571716	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81433179	81426738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81433129
ENSMUSG00000034768.5_102167554_102170288_1	chr11	+	1803	4	NNC	ENSMUSG00000034768.5	novel	2843	5	NA	NA	7985	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	22.0504472113883	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGGACATTGTAGGGTT	3700	False	NA	NA	False	AATAAA	-21	NA	102167553	102170288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_102167698_102168003_102168118_102168701_102168940_102168981
ENSMUSG00000034773.17_102139708_102146643_1	chr11	+	1126	3	ISM	ENSMUSG00000034773.17	ENSMUST00000133930.8	2813	11	0	9370	0	-4797	5prime_fragment	FALSE	canonical	3	313	junction_2	11.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTCTGTTGAATCTCC	NA	False	NA	NA	False	NA	NA	NA	102139707	102146643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_102139919_102141504_102141556_102145779
ENSMUSG00000034773.17_102139708_102156013_2	chr11	+	2703	11	NNC	ENSMUSG00000034773.17	novel	2813	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	126.309144562062	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTCCCACACCTCCT	NA	False	NA	15	True	AATAAA	-22	NA	102139707	102156013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_102139919_102141504_102141556_102145289_102145446_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ENSMUSG00000034789.9_55467693_55469438_1	chr13	-	853	8	FSM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	320	-5	154	0	multi-exon	FALSE	canonical	3	320	junction_3	95.4118890465364	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCACTGGGTGTCAAA	6762	False	NA	-17	True	AATAAA	-19	NA	55469438	55467692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ENSMUSG00000034789.9_55467693_55469744_1	chr13	-	847	8	NNC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	201.457343436495	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCACTGGGTGTCAAA	6456	False	NA	-17	True	AATAAA	-19	NA	55469744	55467692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469662
ENSMUSG00000034789.9_55467693_55469744_2	chr13	-	531	4	NNC	ENSMUSG00000034789.9	novel	1592	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	281.479819683204	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCACTGGGTGTCAAA	6456	False	NA	-17	True	AATAAA	-19	NA	55469744	55467692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_55468028_55468124_55468188_55468315_55468367_55469662
ENSMUSG00000034793.16_102080652_102084658_1	chr11	+	1167	6	FSM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	157	249	0	81	multi-exon	FALSE	canonical	3	149	junction_4	4.31740662898458	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACACTCCTCGACCAACC	NA	False	NA	NA	False	NA	NA	NA	102080651	102084658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
ENSMUSG00000034807.10_72065551_72077555_1	chr8	+	2652	10	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	1909	0	1736	0	3prime_fragment	FALSE	canonical	3	748	junction_7	72.9014216867587	579	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTTTGGTGCCCC	NA	False	NA	30	True	ATTAAA	-22	NA	72065550	72077555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ENSMUSG00000034826.15_92563610_92582986_1	chr5	-	2049	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	92	211	-4	-211	multi-exon	FALSE	canonical	3	487	junction_1	63.2088235288462	1414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATGATTTGTGTGGTT	NA	False	NA	NA	False	AGTAAA	-15	NA	92582986	92563609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
ENSMUSG00000034826.15_92563832_92582986_1	chr5	-	1827	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	92	433	-4	236	multi-exon	FALSE	canonical	3	487	junction_1	63.2088235288462	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACTGTTGTTCATTTTA	NA	False	NA	NA	False	TTTAAA	-18	NA	92582986	92563831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
ENSMUSG00000034848.18_66072546_66086982_1	chr2	-	1243	6	ISM	ENSMUSG00000034848.18	ENSMUST00000125446.3	4061	28	-46	57559	-21	-11086	5prime_fragment	FALSE	canonical	2	9	junction_3	7.79743547584717	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGAATTGCATCAATA	NA	False	NA	NA	False	AATAAA	-21	NA	66086982	66072545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_66073133_66077651_66077775_66079738_66079906_66082237_66082349_66082446_66082577_66086857
ENSMUSG00000034853.17_106604704_106614565_1	chr4	-	1778	9	NNC	ENSMUSG00000034853.17	novel	2620	14	NA	NA	-1408	-116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.4400459121974	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGGACGTCAGTGTTTT	2671	False	NA	NA	False	NA	NA	NA	106614565	106604703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106614507
ENSMUSG00000034868.10_71281021_71297525_1	chr17	-	879	4	NNC	ENSMUSG00000034868.10	novel	2143	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	924.485202092975	8149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTCTGGTTTTGCTGGA	3404	False	NA	-34	True	AATAAA	-37	NA	71297525	71281020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_71281481_71282453_71282616_71284042_71284242_71297467
ENSMUSG00000034868.10_71281021_71297525_2	chr17	-	1139	5	NNC	ENSMUSG00000034868.10	novel	2143	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1089.48413825076	5776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTCTGGTTTTGCTGGA	3404	False	NA	-34	True	AATAAA	-37	NA	71297525	71281020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_71281492_71282453_71282616_71284042_71284242_71292533_71292783_71297467
ENSMUSG00000034868.10_71281021_71297525_3	chr17	-	710	4	NNC	ENSMUSG00000034868.10	novel	2143	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1036.58316919901	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTCTGGTTTTGCTGGA	3404	False	NA	-34	True	AATAAA	-37	NA	71297525	71281020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_71281492_71282453_71282546_71284152_71284242_71297467
ENSMUSG00000034868.10_71281021_71297525_4	chr17	-	707	4	NNC	ENSMUSG00000034868.10	novel	2143	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1036.58316919901	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTCTGGTTTTGCTGGA	3404	False	NA	-34	True	AATAAA	-37	NA	71297525	71281020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_71281492_71282453_71282554_71284163_71284242_71297467
ENSMUSG00000034868.10_71281021_71297525_6	chr17	-	532	4	NNC	ENSMUSG00000034868.10	novel	2143	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	927.784817005897	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTCTGGTTTTGCTGGA	3404	False	NA	-34	True	AATAAA	-37	NA	71297525	71281020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_71281226_71282545_71282616_71284042_71284242_71297467
ENSMUSG00000034868.10_71281266_71297525_1	chr17	-	645	4	FSM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	360	1138	0	0	multi-exon	FALSE	canonical	3	1955	junction_2	187.919013289118	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACACACACCCCATAGG	3404	False	NA	NA	False	NA	NA	NA	71297525	71281265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_71281492_71282453_71282616_71284042_71284242_71297467
ENSMUSG00000034871.3_106604704_106657040_1	chr4	+	2734	16	NIC	ENSMUSG00000034871.3	novel	1923	8	NA	NA	13618	51551	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTCCCCGCCCTCCGGA	NA	False	NA	NA	False	NA	NA	NA	106604703	106657040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106656880
ENSMUSG00000034875.6_35246610_35254722_1	chr7	-	1291	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	1007	0	-103	0	multi-exon	FALSE	canonical	3	351	junction_1	2	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTTTATTCTACT	NA	False	NA	2	True	ATTAAA	-29	NA	35254722	35246609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_35247549_35250878_35251087_35254578
ENSMUSG00000034875.6_35246610_35254902_1	chr7	-	1471	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	827	0	-283	0	multi-exon	FALSE	canonical	3	351	junction_1	2	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTTTATTCTACT	NA	False	NA	2	True	ATTAAA	-29	NA	35254902	35246609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_35247549_35250878_35251087_35254578
ENSMUSG00000034875.6_35247237_35254722_1	chr7	-	664	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	1007	627	-103	164	multi-exon	FALSE	canonical	3	351	junction_1	2	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCATGTGTGTTTTG	NA	False	NA	0	True	CATAAA	-19	NA	35254722	35247236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_35247549_35250878_35251087_35254578
ENSMUSG00000034891.14_54906673_54914408_1	chr13	-	1349	6	NNC	ENSMUSG00000034891.14	novel	1351	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.7636687156114	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCGCCGCCTAGGCAGG	NA	False	NA	-1	True	AATAAA	-16	NA	54914408	54906672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_54907355_54907680_54907765_54910451_54910575_54910734_54910774_54913375_54913506_54914117
ENSMUSG00000034906.16_126945747_126975847_1	chr2	-	2822	19	NIC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	144.893500693474	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAGTGCCCAGTAAACA	NA	False	NA	-5	True	AATAAA	-16	NA	126975847	126945746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975318_126975491_126975768
ENSMUSG00000034930.17_83122900_83129560_1	chr6	+	1955	11	ISM	ENSMUSG00000034930.17	ENSMUST00000087938.11	3080	12	8809	0	-1916	0	3prime_fragment	FALSE	canonical	3	54	junction_8	8.87693640846886	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTCTTTCACTTGTCTT	1157	False	NA	18	True	ATTAAA	-18	NA	83122899	83129560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ENSMUSG00000034932.5_81100547_81102758_1	chr10	-	584	3	NNC	ENSMUSG00000034932.5	novel	604	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	486	2753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCATGCCCTGTG	3104	False	NA	0	True	AATAAA	-29	NA	81102758	81100546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_81100822_81101484_81101642_81102606
ENSMUSG00000034932.5_81100709_81102758_1	chr10	-	432	3	FSM	ENSMUSG00000034932.5	ENSMUST00000046114.5	604	3	10	162	0	-162	multi-exon	FALSE	canonical	3	958	junction_1	11.5	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGTAGTGTGATGATG	3104	False	NA	NA	False	NA	NA	NA	81102758	81100708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_81100832_81101484_81101642_81102606
ENSMUSG00000034947.14_101473126_101481738_1	chr11	+	1370	9	FSM	ENSMUSG00000034947.14	ENSMUST00000039581.14	2304	9	58	876	0	146	multi-exon	FALSE	canonical	3	13	junction_1	4.99843725578305	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGCTTTGATCATGT	3746	False	NA	NA	False	TATAAA	-13	NA	101473125	101481738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101473152_101473450_101473531_101474383_101474611_101475271_101475336_101477064_101477219_101479678_101479820_101479923_101479968_101480760_101480815_101481158
ENSMUSG00000034973.17_86437054_86453880_1	chr9	+	2042	13	NIC	ENSMUSG00000034973.17	novel	8890	37	NA	NA	5384	15904	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1010	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCGGCCCGACGCCCC	NA	False	NA	NA	False	NA	NA	NA	86437053	86453880	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ENSMUSG00000034993.8_101356562_101362679_1	chr11	-	1327	5	NIC	ENSMUSG00000034993.8	novel	2766	6	NA	NA	-5623	-6991	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGCGAAGGCGTCGGCG	NA	False	NA	NA	False	NA	NA	NA	101362679	101356561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_101356760_101359758_101359847_101360838_101360949_101361543_101361679_101361883
ENSMUSG00000035027.19_80942524_80959717_1	chr10	+	1328	11	NNC	ENSMUSG00000035027.19	novel	662	7	NA	NA	345	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	211.816524379001	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGCTGTGCTCCTGCC	1875	False	NA	13	True	NA	NA	NA	80942523	80959717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_80942588_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
ENSMUSG00000035027.19_80944673_80959717_1	chr10	+	1176	10	ISM	ENSMUSG00000035027.19	ENSMUST00000143517.8	2405	11	2924	814	2494	0	3prime_fragment	FALSE	canonical	3	212	junction_6	162.286288718958	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGCTGTGCTCCTGCC	4024	False	NA	13	True	NA	NA	NA	80944672	80959717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956876_80956945_80957736_80957799_80958400_80958447_80959453
ENSMUSG00000035048.14_102463886_102503745_1	chr9	+	2093	13	NIC	ENSMUSG00000035048.14	novel	727	3	NA	NA	-39609	-3181	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCTCCCACCCCTCGA	NA	False	NA	NA	False	NA	NA	NA	102463885	102503745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503461
ENSMUSG00000035048.14_102503495_102511441_1	chr9	+	406	3	FSM	ENSMUSG00000035048.14	ENSMUST00000190279.7	589	3	0	183	0	0	multi-exon	TRUE	canonical	3	1105	junction_1	209.5	6881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCACTTGGTTTTCGT	NA	False	NA	17	True	AATAAA	-17	NA	102503494	102511441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_102503546_102506961_102507088_102511212
ENSMUSG00000035048.14_102503862_102511441_1	chr9	+	380	3	FSM	ENSMUSG00000035048.14	ENSMUST00000188398.7	727	3	339	8	0	0	multi-exon	FALSE	canonical	3	126	junction_1	699	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCACTTGGTTTTCGT	NA	False	NA	17	True	AATAAA	-17	NA	102503861	102511441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_102503887_102506961_102507088_102511212
ENSMUSG00000035051.16_80597641_80604905_1	chr17	-	642	5	NNC	ENSMUSG00000035051.16	novel	4913	23	NA	NA	-7000	-25137	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	412	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTCACCCGGAAGCAAAAG	NA	False	NA	NA	False	NA	NA	NA	80604905	80597640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_80597767_80599753_80599808_80601898_80602006_80602941_80603079_80604687
ENSMUSG00000035062.14_94682802_94702014_1	chrX	-	2121	5	FSM	ENSMUSG00000035062.14	ENSMUST00000044382.7	2219	5	101	-3	0	0	multi-exon	FALSE	canonical	3	32	junction_1	3.76662979332984	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTAACTGAGTGCATT	982	False	NA	NA	False	AATAAA	-18	NA	94702014	94682801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_94684258_94685769_94685933_94686913_94687087_94688912_94689085_94701857
ENSMUSG00000035069.4_103171009_103223640_1	chr4	+	1786	8	NIC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	32.5739347406756	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGCCTTAGTTTGTAG	42	False	NA	16	True	AATAAA	-28	NA	103171008	103223640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103188501_103188577_103210698_103210849_103223169
ENSMUSG00000035069.4_103171009_103223640_2	chr4	+	2010	10	NNC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	38.2935381197454	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGCCTTAGTTTGTAG	42	False	NA	16	True	AATAAA	-28	NA	103171008	103223640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_103171081_103173440_103173536_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
ENSMUSG00000035078.7_63758038_63781145_1	chr14	-	4146	12	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	286	-938	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.467814354144	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTCATAATCTACTG	NA	False	NA	-13	True	AATAAA	-17	NA	63781145	63758037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_63759086_63760061_63761028_63761077_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ENSMUSG00000035086.14_101179088_101193067_1	chr11	-	1968	12	NNC	ENSMUSG00000035086.14	novel	2123	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	179.909205751261	558	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	-2	True	AATAAA	-25	NA	101193067	101179087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185791_101185991_101186120_101186258_101186359_101186405_101187083_101187143_101189834_101189903_101192553_101192683_101192957
ENSMUSG00000035150.16_93232313_93256257_1	chrX	-	3565	13	NNC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	312.641656782259	5520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGCCCATGTGTTT	NA	False	NA	-2	True	AATAAA	-21	NA	93256257	93232312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_93232417_93232440_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ENSMUSG00000035150.16_93234244_93256257_1	chrX	-	1658	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	58	1931	0	-1931	multi-exon	FALSE	canonical	3	1008	junction_2	64.9970120101527	2692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCCCCTCATATCCAAC	NA	False	NA	NA	False	NA	NA	NA	93256257	93234243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ENSMUSG00000035150.16_93234244_93256468_1	chrX	-	1663	12	NIC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	0	-1931	combination_of_known_junctions	FALSE	canonical	3	89	junction_11	299.322651309213	2520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCCCCTCATATCCAAC	NA	False	NA	NA	False	NA	NA	NA	93256468	93234243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256376
ENSMUSG00000035171.10_21574676_21630164_1	chr19	-	1438	4	FSM	ENSMUSG00000035171.10	ENSMUST00000038830.10	1614	4	176	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	6.94422221866655	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTCTTGTTGTTGT	629	False	NA	NA	False	AATAAA	-21	NA	21630164	21574675	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_21575699_21576118_21576233_21596472_21596580_21629970
ENSMUSG00000035171.10_21574676_21630164_2	chr19	-	1858	3	FSM	ENSMUSG00000035171.10	ENSMUST00000179768.8	962	3	117	-1013	0	0	multi-exon	FALSE	canonical	3	207	junction_2	1.5	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTCTTGTTGTTGT	629	False	NA	NA	False	AATAAA	-21	NA	21630164	21574675	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_21576233_21596472_21596580_21629970
ENSMUSG00000035171.10_21574676_21768583_1	chr19	-	1745	2	NNC	ENSMUSG00000035171.10	novel	1614	4	NA	NA	-138243	0	intron_retention	FALSE	canonical	0	0	junction_1	0	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTCTTGTTGTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	21768583	21574675	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_21576233_21768395
ENSMUSG00000035171.10_21574676_21768583_2	chr19	-	1325	3	NNC	ENSMUSG00000035171.10	novel	1614	4	NA	NA	-138243	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	97	2173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTCTTGTTGTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	21768583	21574675	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_21575699_21576118_21576233_21768395
ENSMUSG00000035183.15_124910044_124930308_1	chr2	+	1665	9	FSM	ENSMUSG00000035183.15	ENSMUST00000070353.4	1954	9	0	289	0	-289	multi-exon	TRUE	canonical	2	7	junction_6	24.0624188310319	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTAACACTTAATTACT	NA	False	NA	5	True	AATAAA	-18	NA	124910043	124930308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124925235_124927576_124927784_124929339_124929442_124929883
ENSMUSG00000035183.15_124910044_124930308_2	chr2	+	1458	8	NIC	ENSMUSG00000035183.15	novel	1954	9	NA	NA	0	-289	combination_of_known_splicesites	FALSE	canonical	3	4	junction_6	24.7608974154074	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTAACACTTAATTACT	NA	False	NA	5	True	AATAAA	-18	NA	124910043	124930308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124925235_124929339_124929442_124929883
ENSMUSG00000035183.15_124929662_124940438_1	chr2	+	1725	5	NIC	ENSMUSG00000035183.15	novel	1954	9	NA	NA	7387	9841	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATGAAATAGAGAATAGTT	NA	False	NA	NA	False	NA	NA	NA	124929661	124940438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369
ENSMUSG00000035198.10_101010943_101017245_1	chr11	+	1732	11	NNC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	179	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	211.726450874708	2169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCCCCGGTCTCTGAA	1409	False	NA	16	True	AATAAA	-19	NA	101010942	101017245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_101011069_101011372_101011486_101011656_101011825_101013389_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
ENSMUSG00000035198.10_101010943_101017245_2	chr11	+	1623	11	FSM	ENSMUSG00000035198.10	ENSMUST00000043680.9	1802	11	179	0	179	0	multi-exon	FALSE	canonical	3	373	junction_8	104.461715475096	2196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCCCCGGTCTCTGAA	1409	False	NA	16	True	AATAAA	-19	NA	101010942	101017245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
ENSMUSG00000035199.7_97187756_97210276_1	chr6	+	1336	3	FSM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	106	0	106	0	multi-exon	FALSE	canonical	3	281	junction_2	50	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTCTATATGGCACAT	8554	False	NA	10	True	AATAAA	-21	NA	97187755	97210276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_97187958_97206497_97206716_97209360
ENSMUSG00000035202.9_123195992_123224383_1	chr9	+	1019	5	ISM	ENSMUSG00000035202.9	ENSMUST00000038863.9	3894	21	0	67346	0	0	5prime_fragment	FALSE	canonical	3	41	junction_4	7.58287544405155	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGGTCCTTTAGGTGA	NA	False	NA	NA	False	AATAAA	-23	NA	123195991	123224383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_123196173_123200919_123201169_123206765_123206895_123221847_123221940_123224015
ENSMUSG00000035212.15_101504915_101515321_1	chr4	+	658	4	FSM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	0	1240	0	-1240	multi-exon	FALSE	canonical	3	539	junction_3	48.8011839564939	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATTGACTCAAAGTGAA	8215	False	NA	NA	False	NA	NA	NA	101504914	101515321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_101505023_101509595_101509672_101513305_101513493_101515034
ENSMUSG00000035212.15_101504915_101516561_1	chr4	+	974	5	NNC	ENSMUSG00000035212.15	novel	1898	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	259.519267107473	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGTTGCATTTCATAAA	8215	False	NA	8	True	AATAAA	-20	NA	101504914	101516561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_101505023_101509595_101509672_101513305_101513493_101515034_101515195_101516118
ENSMUSG00000035212.15_101504915_101516561_2	chr4	+	1711	3	NIC	ENSMUSG00000035212.15	novel	1898	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_2	296.5	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGTTGCATTTCATAAA	8215	False	NA	8	True	AATAAA	-20	NA	101504914	101516561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_101505023_101509595_101509672_101515034
ENSMUSG00000035215.10_80688667_80691043_1	chr10	-	478	4	NNC	ENSMUSG00000035215.10	novel	468	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	2086.65489879536	14625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTCCCTTCCTGCTCT	NA	False	NA	-21	True	AATAAA	-17	NA	80691043	80688666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_80688935_80689591_80689664_80690451_80690561_80691014
ENSMUSG00000035215.10_80688667_80691043_2	chr10	-	453	4	NNC	ENSMUSG00000035215.10	novel	468	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2103.14309757774	10990	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTCCCTTCCTGCTCT	NA	False	NA	-21	True	AATAAA	-17	NA	80691043	80688666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_80688935_80689591_80689664_80690451_80690536_80691014
ENSMUSG00000035215.10_80688767_80691043_1	chr10	-	360	4	FSM	ENSMUSG00000035215.10	ENSMUST00000035775.9	468	4	0	108	0	0	multi-exon	FALSE	canonical	3	2872	junction_3	751.769616009822	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCTTCCTTCTATGGG	NA	False	NA	NA	False	NA	NA	NA	80691043	80688766	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80688935_80689591_80689664_80690451_80690543_80691014
ENSMUSG00000035227.8_99488111_99508094_1	chr7	-	1484	5	FSM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	90	1335	-11	0	multi-exon	FALSE	canonical	2	1599	junction_2	370.901856964885	2372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGAGTCTTGAAAGAAG	NA	False	NA	-3	True	AATAAA	-18	NA	99508094	99488110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99507970
ENSMUSG00000035227.8_99488111_99508094_2	chr7	-	1493	5	NNC	ENSMUSG00000035227.8	novel	1610	6	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1001.95518238093	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGAGTCTTGAAAGAAG	NA	False	NA	-3	True	AATAAA	-18	NA	99508094	99488110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_99489091_99493906_99494042_99497505_99497667_99498173_99498267_99507970
ENSMUSG00000035227.8_99488888_99508094_1	chr7	-	707	5	NNC	ENSMUSG00000035227.8	novel	2909	5	NA	NA	-11	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	1001.95518238093	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTGCTGGATCATACG	NA	False	NA	-2	True	AATAAA	-21	NA	99508094	99488887	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_99489091_99493906_99494042_99497505_99497658_99498173_99498267_99507970
ENSMUSG00000035227.8_99488888_99508094_2	chr7	-	706	5	NNC	ENSMUSG00000035227.8	novel	2909	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1223.3993624324	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTGCTGGATCATACG	NA	False	NA	-2	True	AATAAA	-21	NA	99508094	99488887	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_99489091_99493906_99494049_99497513_99497658_99498173_99498267_99507970
ENSMUSG00000035227.8_99488888_99508094_4	chr7	-	707	5	NNC	ENSMUSG00000035227.8	novel	2909	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1043.87391480006	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTGCTGGATCATACG	NA	False	NA	-2	True	AATAAA	-21	NA	99508094	99488887	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_99489091_99493906_99494050_99497513_99497667_99498182_99498267_99507970
ENSMUSG00000035227.8_99488888_99508094_6	chr7	-	707	5	FSM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	90	2112	-11	0	multi-exon	FALSE	canonical	2	1599	junction_2	370.901856964885	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTGCTGGATCATACG	NA	False	NA	-2	True	AATAAA	-21	NA	99508094	99488887	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99507970
ENSMUSG00000035232.9_92808702_92875807_1	chrX	-	1626	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	0	489	0	0	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGGCTCACTATGTCCA	NA	False	NA	-85	True	NA	NA	NA	92875807	92808701	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
ENSMUSG00000035242.16_80662516_80665004_1	chr10	+	929	5	NIC	ENSMUSG00000035242.16	novel	1071	6	NA	NA	0	-114	intron_retention	FALSE	canonical	3	6566	junction_4	420.790624895565	7440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTATTGCTGTTTAAG	NA	False	NA	NA	False	AATAAA	-14	NA	80662515	80665004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUSG00000035242.16_80662516_80665004_2	chr10	+	923	5	NIC	ENSMUSG00000035242.16	novel	708	6	NA	NA	0	-114	intron_retention	FALSE	canonical	3	233	junction_1	2913.0790733346	2128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTATTGCTGTTTAAG	NA	False	NA	NA	False	AATAAA	-14	NA	80662515	80665004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_80662740_80664076_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUSG00000035242.16_80662516_80665119_1	chr10	+	1038	5	NIC	ENSMUSG00000035242.16	novel	708	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	233	junction_1	2913.0790733346	19510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTGTCTTGTGTCCT	NA	False	NA	14	True	AATAAA	-14	NA	80662515	80665119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_80662740_80664076_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUSG00000035242.16_80662516_80665119_2	chr10	+	1022	5	NIC	ENSMUSG00000035242.16	novel	1071	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	460	junction_4	2987.93005272881	5701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTGTCTTGTGTCCT	NA	False	NA	14	True	AATAAA	-14	NA	80662515	80665119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664726
ENSMUSG00000035242.16_80662516_80665119_3	chr10	+	1044	5	NIC	ENSMUSG00000035242.16	novel	1071	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	6566	junction_4	420.790624895565	28348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTGTCTTGTGTCCT	NA	False	NA	14	True	AATAAA	-14	NA	80662515	80665119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUSG00000035247.17_51795404_51819189_1	chr12	-	3220	15	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	57130	4899	-7175	-4899	internal_fragment	FALSE	canonical	3	48	junction_14	29.843469186092	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGTTTAATGGGATT	NA	False	NA	NA	False	NA	NA	NA	51819189	51795403	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816149_51819056
ENSMUSG00000035266.17_100910017_100914093_1	chr5	-	715	3	NNC	ENSMUSG00000035266.17	novel	442	3	NA	NA	586	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	45.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCGCTCTGGGTGATTA	2453	False	NA	-1	True	ATTAAA	-20	NA	100914093	100910016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_100910503_100912806_100912942_100913999
ENSMUSG00000035278.10_80631933_80634074_1	chr10	-	934	5	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	548.522105297498	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634074	80631932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_80632357_80632424_80632489_80632565_80632657_80633356_80633552_80633914
ENSMUSG00000035278.10_80631933_80634074_2	chr10	-	806	5	FSM	ENSMUSG00000035278.10	ENSMUST00000219378.2	533	5	54	-327	-46	0	multi-exon	FALSE	canonical	3	76	junction_4	475.904664822693	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634074	80631932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633914
ENSMUSG00000035278.10_80631933_80634074_4	chr10	-	951	5	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-46	0	intron_retention	FALSE	canonical	3	953	junction_4	141.850934082226	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634074	80631932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_80632357_80632424_80632657_80633606_80633674_80633743_80633812_80633914
ENSMUSG00000035278.10_80631933_80634074_5	chr10	-	866	6	NNC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	455.976578345862	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634074	80631932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633804_80633914
ENSMUSG00000035278.10_80631933_80634074_6	chr10	-	874	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	386	0	-46	0	multi-exon	FALSE	canonical	3	943	junction_2	140.821021158064	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634074	80631932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ENSMUSG00000035278.10_80631933_80634293_1	chr10	-	1025	5	FSM	ENSMUSG00000035278.10	ENSMUST00000219378.2	533	5	-165	-327	0	0	multi-exon	FALSE	canonical	3	76	junction_4	475.904664822693	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634293	80631932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633914
ENSMUSG00000035278.10_80631933_80634293_2	chr10	-	1093	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	167	0	0	0	multi-exon	FALSE	canonical	3	943	junction_2	140.821021158064	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634293	80631932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ENSMUSG00000035278.10_80631933_80634394_1	chr10	-	1126	5	FSM	ENSMUSG00000035278.10	ENSMUST00000219378.2	533	5	-266	-327	0	0	multi-exon	FALSE	canonical	3	76	junction_4	475.904664822693	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634394	80631932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633914
ENSMUSG00000035295.11_38891592_38895137_1	chr2	+	440	4	NNC	ENSMUSG00000035295.11	novel	1194	9	NA	NA	3248	-1043	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	71841	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGAAAGGGCGGGGCC	NA	False	NA	NA	False	NA	NA	NA	38891591	38895137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_38891778_38894118_38894201_38894750_38894881_38895095
ENSMUSG00000035295.11_38891592_38895137_2	chr2	+	657	5	NNC	ENSMUSG00000035295.11	novel	1194	9	NA	NA	3248	-1043	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1822	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGAAAGGGCGGGGCC	NA	False	NA	NA	False	NA	NA	NA	38891591	38895137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_38891778_38893068_38893279_38894118_38894201_38894743_38894881_38895095
ENSMUSG00000035295.11_38891592_38895137_3	chr2	+	425	4	NNC	ENSMUSG00000035295.11	novel	1194	9	NA	NA	3248	-1043	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	8979	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGAAAGGGCGGGGCC	NA	False	NA	NA	False	NA	NA	NA	38891591	38895137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_38891756_38894118_38894201_38894743_38894881_38895095
ENSMUSG00000035295.11_38891592_38895137_4	chr2	+	414	4	NNC	ENSMUSG00000035295.11	novel	1194	9	NA	NA	3248	-1043	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5023	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGAAAGGGCGGGGCC	NA	False	NA	NA	False	NA	NA	NA	38891591	38895137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_38891778_38894151_38894201_38894743_38894881_38895095
ENSMUSG00000035295.11_38891592_38895137_5	chr2	+	465	4	NNC	ENSMUSG00000035295.11	novel	1194	9	NA	NA	3248	-1043	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	81581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGAAAGGGCGGGGCC	NA	False	NA	NA	False	NA	NA	NA	38891591	38895137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_38891778_38894118_38894201_38894743_38894899_38895095
ENSMUSG00000035297.15_100666309_100695646_1	chr5	+	1592	10	NNC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	435.859927663934	3930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTACTTGGTTTTTAAT	5407	False	NA	20	True	AATAAA	-22	NA	100666308	100695646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695175
ENSMUSG00000035297.15_100666309_100695646_2	chr5	+	1397	8	NIC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_7	487.320872375749	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTACTTGGTTTTTAAT	5407	False	NA	20	True	AATAAA	-22	NA	100666308	100695646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100695169
ENSMUSG00000035297.15_100666309_100695646_3	chr5	+	1518	9	NIC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	442.714284273729	3135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTACTTGGTTTTTAAT	5407	False	NA	20	True	AATAAA	-22	NA	100666308	100695646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_100666417_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ENSMUSG00000035297.15_100666309_100695646_4	chr5	+	1593	10	NNC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_6	423.39894504671	3975	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTACTTGGTTTTTAAT	5407	False	NA	20	True	AATAAA	-22	NA	100666308	100695646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685168_100685335_100689402_100689519_100691704_100691790_100695169
ENSMUSG00000035297.15_100666309_100695646_5	chr5	+	1482	9	NIC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_7	458.433184199181	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTACTTGGTTTTTAAT	5407	False	NA	20	True	AATAAA	-22	NA	100666308	100695646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100691704_100691790_100695169
ENSMUSG00000035351.17_87982854_88014254_1	chr10	+	1175	9	NIC	ENSMUSG00000035351.17	novel	1267	10	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	12	junction_8	178.136885568374	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTCCTATTGTGTTGG	NA	False	NA	14	True	AATAAA	-22	NA	87982853	88014254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88013995
ENSMUSG00000035351.17_87982854_88014254_2	chr10	+	1273	10	NNC	ENSMUSG00000035351.17	novel	1267	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	183.98973401313	2884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTCCTATTGTGTTGG	NA	False	NA	14	True	AATAAA	-22	NA	87982853	88014254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010801_88012935_88013029_88013995
ENSMUSG00000035351.17_87982854_88014254_3	chr10	+	1263	10	NNC	ENSMUSG00000035351.17	novel	1267	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	181.049069127954	2910	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTCCTATTGTGTTGG	NA	False	NA	14	True	AATAAA	-22	NA	87982853	88014254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010424_88010744_88010796_88012934_88013029_88013995
ENSMUSG00000035351.17_87982854_88014254_4	chr10	+	929	8	NNC	ENSMUSG00000035351.17	novel	1267	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	181.928108698722	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTCCTATTGTGTTGG	NA	False	NA	14	True	AATAAA	-22	NA	87982853	88014254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010322_88014082
ENSMUSG00000035365.16_87927294_87982764_1	chr10	-	3199	11	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-24	0	intron_retention	FALSE	canonical	3	53	junction_4	10.555093557141	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTGGTTTATACTT	NA	False	NA	-11	True	ATTAAA	-13	NA	87982764	87927293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
ENSMUSG00000035365.16_87927294_87982764_2	chr10	-	3352	12	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-24	0	intron_retention	FALSE	canonical	3	12	junction_11	22.0262803213204	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTGGTTTATACTT	NA	False	NA	-11	True	ATTAAA	-13	NA	87982764	87927293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357_87982511_87982713
ENSMUSG00000035365.16_87927906_87982764_2	chr10	-	2587	11	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-24	-612	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	10.555093557141	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAAAAATCCCCATTTT	NA	False	NA	-5	True	AATAAA	-18	NA	87982764	87927905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
ENSMUSG00000035365.16_87928644_87982764_1	chr10	-	1849	11	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-24	-1350	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	10.555093557141	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATGTTGTGGTTTTTTTT	NA	False	NA	NA	False	TTTAAA	-7	NA	87982764	87928643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
ENSMUSG00000035367.10_58538956_58550279_1	chr13	+	2796	15	NNC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	-11106	-4591	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGCTGTCGCCTGTAGC	NA	False	NA	NA	False	NA	NA	NA	58538955	58550279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000035367.10_58538956_58550279_2	chr13	+	2736	15	NNC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	-11106	-4591	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGCTGTCGCCTGTAGC	NA	False	NA	NA	False	NA	NA	NA	58538955	58550279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000035367.10_58539053_58550330_1	chr13	+	2750	15	NNC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	-11009	-4540	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGGGGAGGGGAGTAG	NA	False	NA	NA	False	NA	NA	NA	58539052	58550330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000035367.10_58539053_58550330_2	chr13	+	2690	15	NNC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	-11009	-4540	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGGGGAGGGGAGTAG	NA	False	NA	NA	False	NA	NA	NA	58539052	58550330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000035367.10_58539764_58550330_1	chr13	+	2039	15	NNC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	-10298	-4540	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGGGGAGGGGAGTAG	NA	False	NA	NA	False	NA	NA	NA	58539763	58550330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000035367.10_58539764_58550330_2	chr13	+	1967	14	NNC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	-10298	-4540	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGGGGAGGGGAGTAG	NA	False	NA	NA	False	NA	NA	NA	58539763	58550330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000035367.10_58539764_58550330_3	chr13	+	1964	15	NNC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	-10298	-4540	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGGGGAGGGGAGTAG	NA	False	NA	NA	False	NA	NA	NA	58539763	58550330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_58540231_58541009_58541180_58541505_58541574_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000035367.10_58539764_58550330_4	chr13	+	1995	14	NNC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	-10298	-4540	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGGGGAGGGGAGTAG	NA	False	NA	NA	False	NA	NA	NA	58539763	58550330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000035367.10_58539764_58550330_5	chr13	+	1935	14	NNC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	-10298	-4540	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGGGGAGGGGAGTAG	NA	False	NA	NA	False	NA	NA	NA	58539763	58550330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000035367.10_58539764_58550330_6	chr13	+	1907	14	NNC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	-10298	-4540	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGGGGAGGGGAGTAG	NA	False	NA	NA	False	NA	NA	NA	58539763	58550330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000035367.10_58539764_58550330_7	chr13	+	2028	15	NNC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	-10298	-4540	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGGGGAGGGGAGTAG	NA	False	NA	NA	False	NA	NA	NA	58539763	58550330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_58540291_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000035367.10_58550514_58557910_1	chr13	+	2366	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	437	1052	0	0	multi-exon	FALSE	canonical	3	159	junction_1	108.5	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAGAATGTTTATA	NA	False	NA	20	True	AATAAA	-33	NA	58550513	58557910	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_58550604_58554815_58554905_58555723
ENSMUSG00000035370.10_80442478_80451617_1	chr10	+	1960	7	NIC	ENSMUSG00000035370.10	novel	4516	6	NA	NA	-171	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	244.454097031642	434	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80442477	80451617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_80442704_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ENSMUSG00000035372.3_3758293_3767003_1	chr19	+	1044	4	FSM	ENSMUSG00000035372.3	ENSMUST00000039048.2	1882	4	-40	878	0	269	multi-exon	FALSE	canonical	3	184	junction_1	53.9897109539298	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCACCTCAGGTGCCCAA	NA	False	NA	NA	False	NA	NA	NA	3758292	3767003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_3758437_3764403_3764626_3765637_3765803_3766490
ENSMUSG00000035372.3_3758293_3767873_1	chr19	+	1914	4	FSM	ENSMUSG00000035372.3	ENSMUST00000039048.2	1882	4	-40	8	0	0	multi-exon	FALSE	canonical	3	184	junction_1	53.9897109539298	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCCAGCTTGTGTGGG	NA	False	NA	3	True	ATTAAA	-15	NA	3758292	3767873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_3758437_3764403_3764626_3765637_3765803_3766490
ENSMUSG00000035376.11_34842798_34926948_2	chr16	+	1006	6	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	0	-2599	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	574.173980601699	916	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTTACATAAAGCATCC	NA	False	NA	70	True	NA	NA	NA	34842797	34926948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_34843006_34846194_34846313_34895949_34896065_34920125_34920248_34922315_34922495_34926684
ENSMUSG00000035376.11_34842798_34926948_3	chr16	+	993	7	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	0	-2599	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	516.44091842361	1341	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTTACATAAAGCATCC	NA	False	NA	70	True	NA	NA	NA	34842797	34926948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_34843006_34846194_34846313_34869089_34869109_34895975_34896065_34920131_34920248_34922315_34922495_34926684
ENSMUSG00000035376.11_34842798_34926948_4	chr16	+	980	6	NIC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	0	-2599	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	561.414428029776	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTTACATAAAGCATCC	NA	False	NA	70	True	NA	NA	NA	34842797	34926948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_34843006_34846194_34846313_34895975_34896065_34920125_34920248_34922315_34922495_34926684
ENSMUSG00000035376.11_34842798_34926948_5	chr16	+	891	5	NIC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	0	-2599	combination_of_known_splicesites	FALSE	canonical	1	23	junction_2	615.449987813795	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTTACATAAAGCATCC	NA	False	NA	70	True	NA	NA	NA	34842797	34926948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_34843006_34846194_34846313_34920125_34920248_34922315_34922495_34926684
ENSMUSG00000035378.18_100550043_100648121_1	chr6	-	1988	11	NIC	ENSMUSG00000035378.18	novel	1990	11	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	64.1530201939083	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGGTGTAAATAATTAGA	NA	False	NA	-2	True	AATAAA	-18	NA	100648121	100550042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_100550750_100588696_100588813_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ENSMUSG00000035378.18_100550043_100648121_2	chr6	-	1993	11	FSM	ENSMUSG00000035378.18	ENSMUST00000113312.9	6816	11	-3	4826	-3	0	multi-exon	TRUE	canonical	3	185	junction_1	14.4027775099111	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGGTGTAAATAATTAGA	NA	False	NA	-2	True	AATAAA	-18	NA	100648121	100550042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_100550750_100588696_100588813_100607838_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ENSMUSG00000035378.18_100550043_100648121_3	chr6	-	1966	11	NNC	ENSMUSG00000035378.18	novel	6816	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_4	57.4063585328315	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGGTGTAAATAATTAGA	NA	False	NA	-2	True	AATAAA	-18	NA	100648121	100550042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_100550750_100588696_100588813_100607838_100607968_100609199_100609254_100613955_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ENSMUSG00000035382.10_45818283_45841024_1	chr9	+	3402	17	FSM	ENSMUSG00000035382.10	ENSMUST00000039059.8	3876	17	488	-14	0	0	multi-exon	FALSE	canonical	3	28	junction_7	6.25	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCACCACTCCCAGTATTC	NA	False	NA	NA	False	AATAAA	-27	NA	45818282	45841024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ENSMUSG00000035439.14_71703769_71725002_1	chr8	-	1357	11	NNC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	129.85010589137	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	714	False	NA	-9	True	NA	NA	NA	71725002	71703768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_71704189_71705714_71705819_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ENSMUSG00000035439.14_71703769_71725002_2	chr8	-	1371	10	NIC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	154.696676526663	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	714	False	NA	-9	True	NA	NA	NA	71725002	71703768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ENSMUSG00000035439.14_71703769_71725086_1	chr8	-	1459	10	NIC	ENSMUSG00000035439.14	novel	1452	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	189.752730587552	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	630	False	NA	-9	True	NA	NA	NA	71725086	71703768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709196_71709999_71710070_71715695_71715749_71724927
ENSMUSG00000035439.14_71703769_71725150_1	chr8	-	1505	11	NNC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	129.85010589137	1082	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	566	False	NA	-9	True	NA	NA	NA	71725150	71703768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_71704189_71705714_71705819_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ENSMUSG00000035443.11_26911006_26917230_1	chr9	+	791	5	ISM	ENSMUSG00000035443.11	ENSMUST00000213770.2	775	7	0	1396	0	3	5prime_fragment	FALSE	canonical	3	529	junction_1	46.8634985889871	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCATTGAGTTTTAGAA	NA	False	NA	6	True	AATAAA	-20	NA	26911005	26917230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852
ENSMUSG00000035443.11_26911006_26918632_1	chr9	+	767	7	NIC	ENSMUSG00000035443.11	novel	775	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	210.647744403357	2216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAAGTGTTTTCTTCTAA	NA	False	NA	36	True	AATAAA	-17	NA	26911005	26918632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_26911062_26911246_26911353_26914892_26915061_26916441_26916511_26916852_26916946_26917647_26917744_26918453
ENSMUSG00000035443.11_26911006_26918632_2	chr9	+	800	7	NNC	ENSMUSG00000035443.11	novel	775	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	220.761560663687	2272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAAGTGTTTTCTTCTAA	NA	False	NA	36	True	AATAAA	-17	NA	26911005	26918632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_26911081_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
ENSMUSG00000035455.13_11750288_11758932_1	chr11	-	3234	3	NNC	ENSMUSG00000035455.13	novel	2974	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_2	266.5	1809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTGTAGTCTGTTTG	NA	False	NA	79	True	TTTAAA	-38	NA	11758932	11750287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_11753064_11756095_11756216_11758594
ENSMUSG00000035455.13_11750552_11758932_1	chr11	-	2670	3	FSM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	27	264	0	0	multi-exon	FALSE	canonical	3	411	junction_2	109.5	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGCAAGATGTAATCTT	NA	False	NA	NA	False	AATAAA	-11	NA	11758932	11750551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_11753064_11756095_11756216_11758894
ENSMUSG00000035473.11_80435076_80492531_1	chr17	+	2139	7	FSM	ENSMUSG00000035473.11	ENSMUST00000039205.11	2314	7	176	-1	176	1	multi-exon	FALSE	canonical	3	126	junction_3	8.09149072929224	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGACTCTTGTTCTTTTGT	NA	False	NA	12	True	AATAAA	-20	NA	80435075	80492531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_80435335_80445441_80445597_80452408_80452616_80457517_80457600_80488989_80489132_80490620_80490796_80491412
ENSMUSG00000035478.15_80228373_80231206_1	chr10	-	1244	5	ISM	ENSMUSG00000035478.15	ENSMUST00000105347.2	914	6	347	-443	-46	0	3prime_fragment	FALSE	canonical	3	1097	junction_1	94.3328548279972	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	80231206	80228372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897
ENSMUSG00000035478.15_80228373_80231206_2	chr10	-	1320	4	FSM	ENSMUSG00000035478.15	ENSMUST00000142997.8	1118	4	-202	0	-46	0	multi-exon	FALSE	canonical	3	1197	junction_3	65.3214274866134	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	80231206	80228372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897
ENSMUSG00000035478.15_80228373_80235256_1	chr10	-	1438	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105349.8	1566	7	128	0	0	0	multi-exon	FALSE	canonical	3	918	junction_6	141.458376288653	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	80235256	80228372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
ENSMUSG00000035493.11_56757399_56787171_1	chr13	+	2704	16	NNC	ENSMUSG00000035493.11	novel	2714	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	16.2020574825133	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTGCTAGCTGCGTG	9425	False	NA	NA	False	AATAAA	-16	NA	56757398	56787171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_56757594_56762052_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56784482_56784950_56785046_56786529
ENSMUSG00000035495.16_46114746_46138455_1	chr4	-	3620	10	NNC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	52.704627669473	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGGGAAGAGTGCTCT	-24	True	NA	-3	True	AATAAA	-25	NA	46138455	46114745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_46117084_46119142_46119282_46119840_46119914_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
ENSMUSG00000035504.17_80165979_80171556_1	chr10	+	1216	5	FSM	ENSMUSG00000035504.17	ENSMUST00000105357.2	2127	5	192	719	0	140	multi-exon	FALSE	canonical	3	489	junction_4	47.9921868641136	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCCCAGCAGCCCCAGC	7219	False	NA	NA	False	NA	NA	NA	80165978	80171556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170943
ENSMUSG00000035504.17_80165979_80171686_1	chr10	+	1346	5	FSM	ENSMUSG00000035504.17	ENSMUST00000105357.2	2127	5	192	589	0	270	multi-exon	FALSE	canonical	3	489	junction_4	47.9921868641136	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGGCAGCAAGGCTCCT	7219	False	NA	NA	False	NA	NA	NA	80165978	80171686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170943
ENSMUSG00000035504.17_80165979_80172275_1	chr10	+	1935	5	FSM	ENSMUSG00000035504.17	ENSMUST00000105357.2	2127	5	192	0	0	0	multi-exon	FALSE	canonical	3	489	junction_4	47.9921868641136	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGTGTCCGCTAAGCTG	7219	False	NA	18	True	AATAAA	-19	NA	80165978	80172275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170943
ENSMUSG00000035521.14_25452305_25459098_1	chr17	-	2228	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	-8	-986	0	0	multi-exon	FALSE	canonical	3	143	junction_3	15.4275727189989	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAATGTTTTATATCTA	NA	False	NA	NA	False	ATTAAA	-22	NA	25459098	25452304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ENSMUSG00000035521.14_25453395_25459098_2	chr17	-	1208	10	NIC	ENSMUSG00000035521.14	novel	2249	11	NA	NA	0	-104	intron_retention	FALSE	canonical	3	143	junction_5	13.752665286014	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCATACTGATAAAAAATA	NA	False	NA	-19	True	AATAAA	-20	NA	25459098	25453394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_25453697_25453781_25453864_25453953_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ENSMUSG00000035521.14_25453395_25459098_3	chr17	-	1138	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	-8	104	0	-104	multi-exon	FALSE	canonical	3	143	junction_3	15.4275727189989	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCATACTGATAAAAAATA	NA	False	NA	-19	True	AATAAA	-20	NA	25459098	25453394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ENSMUSG00000035530.14_100210812_100212360_1	chr11	+	659	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	101	562	101	1	multi-exon	FALSE	canonical	3	11207	junction_1	646.711854091312	64157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGTAGTCTTGAAGTC	4058	False	NA	0	True	AATAAA	-14	NA	100210811	100212360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
ENSMUSG00000035530.14_100210812_100212922_1	chr11	+	1221	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	101	0	101	0	multi-exon	FALSE	canonical	3	11207	junction_1	646.711854091312	79356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGATGTCCAGATTGCAC	4058	False	NA	21	True	AATAAA	-17	NA	100210811	100212922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
ENSMUSG00000035530.14_100211344_100212360_1	chr11	+	632	3	FSM	ENSMUSG00000035530.14	ENSMUST00000139846.2	447	3	0	-185	0	1	multi-exon	FALSE	canonical	3	12221	junction_1	273.5	4845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGTAGTCTTGAAGTC	4590	False	NA	0	True	AATAAA	-14	NA	100211343	100212360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100211656_100211773_100211876_100212142
ENSMUSG00000035559.10_71211439_71213592_1	chr8	-	836	5	FSM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	0	144	0	-144	multi-exon	FALSE	canonical	3	649	junction_3	27.2304976083802	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGGTTTTCCAGTGGGAC	NA	False	NA	NA	False	NA	NA	NA	71213592	71211438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71211671_71211754_71211884_71212036_71212114_71213013_71213185_71213365
ENSMUSG00000035560.6_65272495_65275229_1	chr12	+	2025	2	FSM	ENSMUSG00000035560.6	ENSMUST00000046331.5	2228	2	204	-1	0	1	multi-exon	FALSE	canonical	3	6	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGACCTCTTTGTTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	65272494	65275229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_65274272_65274981
ENSMUSG00000035575.12_79825628_79853217_1	chr11	-	3029	19	FSM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	-1	849	-1	-849	multi-exon	FALSE	canonical	3	409	junction_5	33.8632416611651	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTGGGTATTTGTTTG	NA	False	NA	-11	True	AATAAA	-16	NA	79853217	79825627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
ENSMUSG00000035575.12_79826676_79853217_1	chr11	-	1981	19	FSM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	-1	1897	-1	0	multi-exon	FALSE	canonical	3	409	junction_5	33.8632416611651	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAACATACTTTTACT	NA	False	NA	-103	True	NA	NA	NA	79853217	79826675	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
ENSMUSG00000035575.12_79851573_79853217_1	chr11	-	259	2	ISM	ENSMUSG00000035575.12	ENSMUST00000146127.2	559	4	-24	2150	-1	-2150	5prime_fragment	FALSE	canonical	3	526	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGAGTCTATAGCTTT	NA	False	NA	NA	False	AATACA	-44	NA	79853217	79851572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_79851658_79853043
ENSMUSG00000035578.17_32836990_32876560_1	chr16	-	1681	11	FSM	ENSMUSG00000035578.17	ENSMUST00000115100.9	5618	11	0	3937	0	0	multi-exon	TRUE	canonical	2	4	junction_9	25.6242073048124	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCACCTAGCATCATGTG	1172	False	NA	2	True	ATTAAA	-29	NA	32876560	32836989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32865889_32866072_32870221_32870484_32873993_32874065_32876520
ENSMUSG00000035585.17_3696828_3704011_1	chr7	+	1482	5	NIC	ENSMUSG00000035585.17	novel	1779	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	468.595241119668	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTTTGAGTCCTTAC	2239	False	NA	6	True	AATAAA	-16	NA	3696827	3704011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_3697058_3697596_3697844_3697976_3698227_3698350_3698621_3703526
ENSMUSG00000035596.15_3680788_3688946_1	chr7	-	1512	3	ISM	ENSMUSG00000035596.15	ENSMUST00000127106.8	1964	6	6171	-4	-1419	0	3prime_fragment	FALSE	canonical	3	185	junction_2	22	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	4620	False	NA	-2	True	AATAAA	-15	NA	3688946	3680787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_3681849_3686807_3686985_3688672
ENSMUSG00000035597.20_65083108_65090651_1	chr12	+	1128	3	ISM	ENSMUSG00000035597.20	ENSMUST00000220798.2	3457	15	0	18278	0	-247	5prime_fragment	FALSE	canonical	3	288	junction_2	19.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGGTAGATTATTTAAA	7508	False	NA	NA	False	NA	NA	NA	65083107	65090651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_65083243_65089234_65089582_65090005
ENSMUSG00000035597.20_65083108_65108929_1	chr12	+	2837	14	FSM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	1	1231	0	0	multi-exon	FALSE	canonical	3	174	junction_3	84.525476709793	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATTGTTGATGAATTCA	7508	False	NA	19	True	AATAAA	-16	NA	65083107	65108929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ENSMUSG00000035597.20_65109210_65120721_1	chr12	+	944	7	NNC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	11325	10561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCCCGCCTCAATCC	NA	False	NA	NA	False	NA	NA	NA	65109209	65120721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116720_65116817_65120588
ENSMUSG00000035597.20_65109210_65120721_10	chr12	+	938	7	NNC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	11325	10561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCCCGCCTCAATCC	NA	False	NA	NA	False	NA	NA	NA	65109209	65120721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_65109515_65110451_65110550_65112522_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
ENSMUSG00000035597.20_65109210_65120721_2	chr12	+	936	7	NNC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	11325	10561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCCCGCCTCAATCC	NA	False	NA	NA	False	NA	NA	NA	65109209	65120721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115875_65116729_65116827_65120588
ENSMUSG00000035597.20_65109210_65120721_3	chr12	+	945	7	NNC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	11325	10561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5994	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCCCGCCTCAATCC	NA	False	NA	NA	False	NA	NA	NA	65109209	65120721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115875_65116720_65116827_65120588
ENSMUSG00000035597.20_65109210_65120721_4	chr12	+	942	7	NNC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	11325	10561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCCCGCCTCAATCC	NA	False	NA	NA	False	NA	NA	NA	65109209	65120721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_65109515_65110451_65110550_65112510_65112571_65113415_65113552_65115775_65115884_65116724_65116827_65120588
ENSMUSG00000035597.20_65109210_65120721_5	chr12	+	940	7	NNC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	11325	10561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCCCGCCTCAATCC	NA	False	NA	NA	False	NA	NA	NA	65109209	65120721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_65109515_65110451_65110540_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
ENSMUSG00000035597.20_65109210_65120721_6	chr12	+	945	7	NNC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	11325	10561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	11256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCCCGCCTCAATCC	NA	False	NA	NA	False	NA	NA	NA	65109209	65120721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116729_65116827_65120588
ENSMUSG00000035597.20_65109210_65120721_7	chr12	+	746	5	NIC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	11325	10561	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCCCGCCTCAATCC	NA	False	NA	NA	False	NA	NA	NA	65109209	65120721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_65109515_65110451_65110550_65115775_65115884_65116724_65116827_65120588
ENSMUSG00000035597.20_65109210_65120721_8	chr12	+	954	7	NIC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	11325	10561	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	18447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCCCGCCTCAATCC	NA	False	NA	NA	False	NA	NA	NA	65109209	65120721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116720_65116827_65120588
ENSMUSG00000035597.20_65109210_65120721_9	chr12	+	943	7	NNC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	11325	10561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCCCGCCTCAATCC	NA	False	NA	NA	False	NA	NA	NA	65109209	65120721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116720_65116827_65120599
ENSMUSG00000035601.10_45297155_45315327_2	chr4	+	1223	9	NNC	ENSMUSG00000035601.10	novel	2064	9	NA	NA	0	185	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	90.2966465324156	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCTTGTGTTAAGTA	-8	True	NA	-48	True	GATAAA	-18	NA	45297154	45315327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_45297187_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ENSMUSG00000035601.10_45297155_45315379_1	chr4	+	1284	9	FSM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	28	752	0	237	multi-exon	FALSE	canonical	3	203	junction_1	41.8103979292233	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGCTTTGTACATTCAT	-8	True	NA	4	True	AATACA	-19	NA	45297154	45315379	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ENSMUSG00000035601.10_45297155_45315489_1	chr4	+	1394	9	FSM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	28	642	0	347	multi-exon	FALSE	canonical	3	203	junction_1	41.8103979292233	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCGATTTCCACCAGCT	-8	True	NA	12	True	CATAAA	-21	NA	45297154	45315489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ENSMUSG00000035601.10_45297155_45315489_3	chr4	+	1385	9	NNC	ENSMUSG00000035601.10	novel	2064	9	NA	NA	0	347	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	90.2966465324156	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCGATTTCCACCAGCT	-8	True	NA	12	True	CATAAA	-21	NA	45297154	45315489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_45297187_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ENSMUSG00000035629.20_32663687_32688709_1	chr16	-	1127	7	ISM	ENSMUSG00000035629.20	ENSMUST00000040986.15	5257	19	12	21589	0	-7792	5prime_fragment	FALSE	canonical	3	55	junction_4	8.20060973342836	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTGATGTCAGTGAGGG	NA	False	NA	NA	False	NA	NA	NA	32688709	32663686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
ENSMUSG00000035637.15_44981403_44989196_1	chr4	+	1060	8	ISM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	8	1538	0	186	5prime_fragment	FALSE	canonical	3	277	junction_3	35.5045268743498	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAAGAAGTGGATGCGT	-23	True	NA	NA	False	AATAGA	-37	NA	44981402	44989196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919
ENSMUSG00000035637.15_44985200_44990734_1	chr4	+	926	5	ISM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	3805	0	3700	0	3prime_fragment	FALSE	canonical	3	317	junction_2	25.7147817412476	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTTGTGTTTGCTGAC	3718	False	NA	13	True	NA	NA	NA	44985199	44990734	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
ENSMUSG00000035642.17_97199772_97228649_1	chr7	-	500	4	FSM	ENSMUSG00000035642.17	ENSMUST00000136757.8	789	4	55	234	0	0	multi-exon	FALSE	canonical	3	37	junction_3	30.4740326617051	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGCTGTCTTACCAGTC	NA	False	NA	-24	True	AATAAA	-14	NA	97228649	97199771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97228572
ENSMUSG00000035671.7_84937585_84950086_1	chr8	-	2489	5	ISM	ENSMUSG00000035671.7	ENSMUST00000039480.7	4625	14	13598	278	13598	-278	3prime_fragment	FALSE	canonical	3	31	junction_1	1.22474487139159	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTAACTTCAAGACTGG	NA	False	NA	-12	True	AAAAAG	-15	NA	84950086	84937584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848
ENSMUSG00000035673.11_79893250_79938555_1	chr10	-	4257	32	ISM	ENSMUSG00000035673.11	ENSMUST00000219260.2	4850	33	1649	424	-23	0	3prime_fragment	FALSE	canonical	3	16	junction_5	30.9623987325878	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTACTTCAGCCTCTGG	NA	False	NA	NA	False	NA	NA	NA	79938555	79893249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894567_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
ENSMUSG00000035674.14_3620379_3621228_1	chr7	+	641	2	ISM	ENSMUSG00000035674.14	ENSMUST00000108644.8	351	4	-6	1899	0	510	5prime_fragment	FALSE	canonical	3	2080	junction_1	0	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	262	False	NA	NA	False	NA	NA	NA	3620378	3621228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_3620407_3620615
ENSMUSG00000035674.14_3620379_3623153_1	chr7	+	257	3	NIC	ENSMUSG00000035674.14	novel	515	4	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1040	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCCCACAATCTTTTCTT	262	False	NA	13	True	AATAAA	-15	NA	3620378	3623153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_3620407_3620615_3620691_3622999
ENSMUSG00000035674.14_3620379_3623153_2	chr7	+	414	4	NNC	ENSMUSG00000035674.14	novel	351	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1440.3567459333	14177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCCCACAATCTTTTCTT	262	False	NA	13	True	AATAAA	-15	NA	3620378	3623153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_3620407_3620615_3620691_3622428_3622507_3622920
ENSMUSG00000035674.14_3620379_3623153_3	chr7	+	828	3	ISM	ENSMUSG00000035674.14	ENSMUST00000108644.8	351	4	-6	-26	0	2	intron_retention	FALSE	canonical	3	2080	junction_1	714	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCCCACAATCTTTTCTT	262	False	NA	13	True	AATAAA	-15	NA	3620378	3623153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_3620407_3620615_3620691_3622428
ENSMUSG00000035674.14_3620379_3623153_4	chr7	+	474	4	NNC	ENSMUSG00000035674.14	novel	782	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	1412.24698815595	1747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCCCACAATCTTTTCTT	262	False	NA	13	True	AATAAA	-15	NA	3620378	3623153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_3620407_3620615_3620830_3622428_3622507_3622999
ENSMUSG00000035674.14_3623323_3632578_1	chr7	+	816	6	NIC	ENSMUSG00000035674.14	novel	515	4	NA	NA	2707	9252	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTCAAGAGACACCTCAAG	3206	False	NA	NA	False	NA	NA	NA	3623322	3632578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_3623474_3623745_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
ENSMUSG00000035674.14_3623323_3632883_1	chr7	+	1121	6	NIC	ENSMUSG00000035674.14	novel	515	4	NA	NA	2707	9557	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCGTCCCGCGAGGCGG	3206	False	NA	NA	False	NA	NA	NA	3623322	3632883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_3623474_3623745_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
ENSMUSG00000035683.14_44300876_44364296_2	chr4	+	2576	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	0	379	0	-379	multi-exon	FALSE	canonical	2	288	junction_12	49.6985375708199	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGACTATTTGGAGTGT	NA	False	NA	26	True	AATAAA	-27	NA	44300875	44364296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035686.9_97062145_97066726_1	chr7	-	1066	2	FSM	ENSMUSG00000035686.9	ENSMUST00000043077.8	1277	2	211	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATGTTGGTCTTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	97066726	97062144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_97062723_97066238
ENSMUSG00000035697.15_79864465_79867299_1	chr10	+	1286	4	ISM	ENSMUSG00000035697.15	ENSMUST00000150022.2	2980	15	6888	-3	6888	3	3prime_fragment	FALSE	canonical	3	84	junction_1	10.6249183003395	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACAGCCCGATCTTGTT	2778	False	NA	9	True	AATAAA	-14	NA	79864464	79867299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_79864718_79864806_79865018_79866122_79866211_79866565
ENSMUSG00000035704.18_97020813_97041392_1	chr7	+	2005	13	NIC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	13	junction_9	36.0380778560061	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCACATTCACTTTCCT	NA	False	NA	63	True	NA	NA	NA	97020812	97041392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037689_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUSG00000035722.16_79849454_79851406_1	chr10	+	981	6	ISM	ENSMUSG00000035722.16	ENSMUST00000043866.8	6590	46	16005	-4	16005	0	3prime_fragment	FALSE	canonical	3	34	junction_1	12.1424873893284	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCACGGCTGAGTTTG	8558	False	NA	10	True	AATAAA	-19	NA	79849453	79851406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ENSMUSG00000035725.14_76804578_76839578_1	chrX	-	4279	9	FSM	ENSMUSG00000035725.14	ENSMUST00000036333.14	4146	9	306	-439	0	439	multi-exon	FALSE	canonical	3	41	junction_4	6.21992765231236	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTCAGGTCGTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	76839578	76804577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76814949_76816721_76816842_76825643_76825908_76829733_76829903_76839153
ENSMUSG00000035754.9_79795989_79803526_1	chr10	+	1389	10	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	541.01920278099	2850	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCGCCTTGGTTGTTCT	2289	False	NA	31	True	ACTAAA	-19	NA	79795988	79803526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802186_79802304_79802393_79802561_79803153_79803223_79803304
ENSMUSG00000035754.9_79795989_79803526_3	chr10	+	1392	10	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	81	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	532.846537099347	2341	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCGCCTTGGTTGTTCT	2289	False	NA	31	True	ACTAAA	-19	NA	79795988	79803526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79796202_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ENSMUSG00000035754.9_79795989_79803526_4	chr10	+	1391	10	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	540.060513298919	2873	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCGCCTTGGTTGTTCT	2289	False	NA	31	True	ACTAAA	-19	NA	79795988	79803526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79796207_79796841_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ENSMUSG00000035754.9_79795989_79803526_5	chr10	+	1391	10	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	541.01920278099	2445	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCGCCTTGGTTGTTCT	2289	False	NA	31	True	ACTAAA	-19	NA	79795988	79803526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802399_79802561_79803153_79803223_79803304
ENSMUSG00000035754.9_79795989_79803526_6	chr10	+	1390	10	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	540.461325576997	2270	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCGCCTTGGTTGTTCT	2289	False	NA	31	True	ACTAAA	-19	NA	79795988	79803526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803160_79803223_79803304
ENSMUSG00000035759.5_111134540_111137588_1	chr10	+	2720	3	NNC	ENSMUSG00000035759.5	novel	2744	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCATGTAAGTTAATTGT	NA	False	NA	NA	False	AATAAA	-20	NA	111134539	111137588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_111134769_111135073_111137471_111137494
ENSMUSG00000035762.12_84370419_84443989_1	chr13	+	2586	12	FSM	ENSMUSG00000035762.12	ENSMUST00000057495.10	2857	12	0	271	0	0	multi-exon	TRUE	canonical	0	0	junction_10	57.0470300398157	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTAATTTATTTGTT	NA	False	NA	21	True	ATTAAA	-22	NA	84370418	84443989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ENSMUSG00000035769.10_119186653_119222399_1	chr9	+	3190	19	FSM	ENSMUSG00000035769.10	ENSMUST00000039610.10	3383	19	206	-13	0	4	multi-exon	FALSE	canonical	3	51	junction_3	12.9909750249458	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTCTCCTTGCTTCCC	NA	False	NA	24	True	AATAAA	-24	NA	119186652	119222399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ENSMUSG00000035772.12_28358094_28360165_1	chr2	+	1039	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	16	1025	0	-1012	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTTGAGCTAACCCTTA	NA	False	NA	NA	False	NA	NA	NA	28358093	28360165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
ENSMUSG00000035772.12_28358094_28360881_1	chr2	+	1755	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	16	309	0	-296	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAAATGTTTGTCTTGGA	NA	False	NA	-58	True	NA	NA	NA	28358093	28360881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
ENSMUSG00000035772.12_28358094_28361177_1	chr2	+	2159	5	NNC	ENSMUSG00000035772.12	novel	2429	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	280.38321989734	2233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGGTGTCAGACTCTC	NA	False	NA	15	True	NA	NA	NA	28358093	28361177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_28358155_28358254_28358372_28358832_28358963_28359232_28359341_28359434
ENSMUSG00000035828.12_88747465_88749929_1	chr15	+	1616	3	ISM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	1076	0	1076	0	3prime_fragment	FALSE	canonical	3	856	junction_1	44	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTGTTTATTGGACT	NA	False	NA	30	True	ATTAAA	-20	NA	88747464	88749929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_88747752_88748518_88748696_88748777
ENSMUSG00000035828.12_88747581_88749929_1	chr15	+	1500	3	ISM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	1192	0	1192	0	3prime_fragment	FALSE	canonical	3	856	junction_1	44	524	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTGTTTATTGGACT	NA	False	NA	30	True	ATTAAA	-20	NA	88747580	88749929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_88747752_88748518_88748696_88748777
ENSMUSG00000035828.12_88747700_88749929_1	chr15	+	1381	3	ISM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	1311	0	1311	0	3prime_fragment	FALSE	canonical	3	856	junction_1	44	503	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTGTTTATTGGACT	NA	False	NA	30	True	ATTAAA	-20	NA	88747699	88749929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_88747752_88748518_88748696_88748777
ENSMUSG00000035834.12_81823316_81859088_1	chr13	-	1656	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	44	1354	-13	-1317	multi-exon	FALSE	canonical	3	220	junction_2	24.1119836409624	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCACTGTAAAATCTCAG	NA	False	NA	NA	False	CATAAA	-17	NA	81859088	81823315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ENSMUSG00000035834.12_81834673_81859088_1	chr13	-	1075	5	ISM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	44	12711	-13	7292	5prime_fragment	FALSE	canonical	3	275	junction_1	7.29297607290741	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTATGGTTATTTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	81859088	81834672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ENSMUSG00000035835.15_79690501_79699352_2	chr10	-	1956	14	Fusion	ENSMUSG00000035835.15_ENSMUSG00000091994.3	novel	3063	9	NA	NA	3763	-3115	intron_retention	FALSE	non_canonical	0	0	junction_1	0	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAACCGACCCAACGGC	NA	False	NA	NA	False	NA	NA	NA	79699352	79690500	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr10_-_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000035840.8_81805911_81820990_1	chr13	+	4121	3	FSM	ENSMUSG00000035840.8	ENSMUST00000224300.2	4250	3	129	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	12	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTTGTTGAATATAAT	418	False	NA	27	True	AATAAA	-29	NA	81805910	81820990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_81806056_81813123_81813389_81817279
ENSMUSG00000035842.11_66430566_66458448_1	chr17	+	3462	27	FSM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	-42	721	0	64	multi-exon	FALSE	canonical	3	130	junction_22	18.327114778237	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCCGTGTTTTTCATT	NA	False	NA	6	True	NA	NA	NA	66430565	66458448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ENSMUSG00000035898.14_86260575_86320613_1	chr5	-	3112	33	FSM	ENSMUSG00000035898.14	ENSMUST00000039373.14	6590	33	49	3429	-15	-374	multi-exon	FALSE	canonical	3	104	junction_13	11.1589632554956	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGAGATGAAGATTTGCC	7137	False	NA	NA	False	AAGAAA	-37	NA	86320613	86260574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308233_86311937_86311967_86312555_86312651_86318413_86318477_86320526
ENSMUSG00000035919.17_22387163_22799576_2	chr9	+	3230	22	FSM	ENSMUSG00000035919.17	ENSMUST00000039798.16	3382	22	152	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	13.43515542748	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	3	True	AATAAA	-20	NA	22387162	22799576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_22387352_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ENSMUSG00000035934.17_36802281_37058562_1	chr9	-	3488	13	FSM	ENSMUSG00000035934.17	ENSMUST00000039674.13	3632	13	141	3	0	0	multi-exon	FALSE	canonical	2	8	junction_11	4.65698400254929	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTGATGCACAGTTCT	NA	False	NA	-8	True	AGTAAA	-16	NA	37058562	36802280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36994502_36994573_37058536
ENSMUSG00000035949.16_34682777_34711981_1	chr2	-	186	2	Genic_Genomic	ENSMUSG00000035949.16	novel	4405	1	NA	NA	951	11749	multi-exon	TRUE	non_canonical	0	0	junction_1	0	24229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCATGCCAACATCCCCT	NA	False	NA	NA	False	NA	NA	NA	34711981	34682776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_34682851_34711869
ENSMUSG00000035949.16_34710488_34711981_1	chr2	-	196	2	Genic_Genomic	ENSMUSG00000035949.16	novel	4405	1	NA	NA	951	1327	multi-exon	TRUE	non_canonical	0	0	junction_1	0	24671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACTAGGGAAGTTGAGAC	NA	False	NA	NA	False	AAAAAG	-4	NA	34711981	34710487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_34710530_34711827
ENSMUSG00000035953.15_51162435_51164596_1	chr14	-	1224	5	NNC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	2070	1090	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2834	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACGTGGGCGATTGGTGT	NA	False	NA	NA	False	NA	NA	NA	51164596	51162434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_51162487_51162669_51162782_51162973_51163162_51163617_51163811_51163917
ENSMUSG00000035953.15_51162435_51164596_2	chr14	-	1221	5	NNC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	2070	1090	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1572	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACGTGGGCGATTGGTGT	NA	False	NA	NA	False	NA	NA	NA	51164596	51162434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_51162479_51162669_51162782_51162973_51163162_51163617_51163811_51163912
ENSMUSG00000035953.15_51162435_51164596_3	chr14	-	1220	5	NNC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	2070	1090	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1087	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACGTGGGCGATTGGTGT	NA	False	NA	NA	False	NA	NA	NA	51164596	51162434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_51162487_51162669_51162782_51162973_51163162_51163626_51163811_51163912
ENSMUSG00000035953.15_51162435_51164596_4	chr14	-	1221	5	NNC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	2070	1090	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1065	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACGTGGGCGATTGGTGT	NA	False	NA	NA	False	NA	NA	NA	51164596	51162434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_51162487_51162669_51162782_51162973_51163154_51163617_51163811_51163912
ENSMUSG00000035953.15_51162435_51164596_5	chr14	-	1234	5	NIC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	2070	1090	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	3465	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACGTGGGCGATTGGTGT	NA	False	NA	NA	False	NA	NA	NA	51164596	51162434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_51162492_51162669_51162782_51162973_51163162_51163617_51163811_51163912
ENSMUSG00000035953.15_51162435_51164596_6	chr14	-	1412	4	NIC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	2070	1090	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1054	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACGTGGGCGATTGGTGT	NA	False	NA	NA	False	NA	NA	NA	51164596	51162434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_51162782_51162973_51163162_51163617_51163811_51163912
ENSMUSG00000035953.15_51162435_51164596_7	chr14	-	1224	5	NNC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	2070	1090	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2629	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACGTGGGCGATTGGTGT	NA	False	NA	NA	False	NA	NA	NA	51164596	51162434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_51162487_51162674_51162782_51162973_51163162_51163617_51163811_51163912
ENSMUSG00000035953.15_51164674_51167706_1	chr14	-	1294	6	ISM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	607	2	-486	0	3prime_fragment	FALSE	canonical	3	781	junction_5	33.7579620237952	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCCCACTTAACAAC	NA	False	NA	-11	True	AATAAA	-16	NA	51167706	51164673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590
ENSMUSG00000035953.15_51164674_51167975_1	chr14	-	1563	6	ISM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	338	2	282	0	3prime_fragment	FALSE	canonical	3	781	junction_5	33.7579620237952	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCCCACTTAACAAC	NA	False	NA	-11	True	AATAAA	-16	NA	51167975	51164673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590
ENSMUSG00000035958.4_25015664_25025472_1	chr13	+	1291	7	FSM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	2	664	0	-316	multi-exon	FALSE	canonical	3	768	junction_5	64.0791611125559	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTAACGTTTTACTTTG	NA	False	NA	22	True	AATAAA	-23	NA	25015663	25025472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_25015913_25015992_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ENSMUSG00000035983.5_40253130_40273184_1	chr12	+	1810	12	NIC	ENSMUSG00000035983.5	novel	1366	2	NA	NA	-19627	-2053	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTGGCCAGACCACGACG	4946	False	NA	NA	False	NA	NA	NA	40253129	40273184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ENSMUSG00000036009.17_105599050_105635716_1	chr10	-	767	8	NNC	ENSMUSG00000036009.17	novel	2033	12	NA	NA	41356	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	43.1797382567144	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCAATGTTCTTGAGTG	NA	False	NA	NA	False	AATAAA	-22	NA	105635716	105599049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105635662
ENSMUSG00000036009.17_105599116_105635719_1	chr10	-	738	8	NNC	ENSMUSG00000036009.17	novel	2145	13	NA	NA	41353	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	44.8967068470983	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAAATCATAGTGTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	105635719	105599115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105635628
ENSMUSG00000036009.17_105599116_105635780_1	chr10	-	765	8	NNC	ENSMUSG00000036009.17	novel	2145	13	NA	NA	41292	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	43.1797382567144	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAAATCATAGTGTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	105635780	105599115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105635662
ENSMUSG00000036009.17_105599116_105635971_1	chr10	-	797	8	NNC	ENSMUSG00000036009.17	novel	2145	13	NA	NA	41101	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	43.1797382567144	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAAATCATAGTGTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	105635971	105599115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105635821
ENSMUSG00000036009.17_105599116_105635971_2	chr10	-	766	8	NNC	ENSMUSG00000036009.17	novel	2145	13	NA	NA	41101	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	43.5229238213517	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAAATCATAGTGTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	105635971	105599115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105635852
ENSMUSG00000036009.17_105599116_105635971_3	chr10	-	702	8	NNC	ENSMUSG00000036009.17	novel	2145	13	NA	NA	41101	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	41.1230110864504	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAAATCATAGTGTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	105635971	105599115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105635916
ENSMUSG00000036009.17_105599116_105636066_1	chr10	-	702	8	NNC	ENSMUSG00000036009.17	novel	2145	13	NA	NA	41006	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	42.1508467002861	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAAATCATAGTGTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	105636066	105599115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105636011
ENSMUSG00000036009.17_105599116_105636066_2	chr10	-	733	8	NNC	ENSMUSG00000036009.17	novel	2145	13	NA	NA	41006	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	42.8366617727938	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAAATCATAGTGTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	105636066	105599115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105635980
ENSMUSG00000036023.7_51045382_51058757_1	chr14	+	1804	16	NNC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	205.864291868859	1829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045381	51058757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054793_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ENSMUSG00000036023.7_51045382_51058757_2	chr14	+	655	8	NNC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	284.813436968046	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045381	51058757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053674_51058621
ENSMUSG00000036036.16_37313374_37321524_1	chr17	+	1744	4	NIC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1458.01973771124	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37313373	37321524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_37313652_37315688_37315796_37316941_37317087_37320310
ENSMUSG00000036036.16_37313446_37320815_1	chr17	+	1011	5	FSM	ENSMUSG00000036036.16	ENSMUST00000069250.14	1749	5	29	709	0	100	multi-exon	FALSE	canonical	3	426	junction_1	1286.78268852981	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCCTCAAGTATGTGAAAG	NA	False	NA	NA	False	NA	NA	NA	37313445	37320815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_37313670_37314177_37314208_37315688_37315796_37316941_37317087_37320310
ENSMUSG00000036036.16_37313446_37320815_2	chr17	+	2454	4	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	0	100	intron_retention	FALSE	canonical	0	0	junction_1	1458.01973771124	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCCTCAAGTATGTGAAAG	NA	False	NA	NA	False	NA	NA	NA	37313445	37320815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_37313632_37314177_37315796_37316941_37317087_37320310
ENSMUSG00000036036.16_37313446_37321524_1	chr17	+	1564	5	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1406.78256582174	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37313445	37321524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_37313514_37314177_37314208_37315688_37315796_37316941_37317087_37320310
ENSMUSG00000036036.16_37313446_37321524_2	chr17	+	1672	4	NIC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1458.01973771124	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37313445	37321524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_37313652_37315688_37315796_37316941_37317087_37320310
ENSMUSG00000036036.16_37313446_37321524_3	chr17	+	1690	4	NIC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_1	1449.17938464805	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37313445	37321524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_37313670_37315688_37315796_37316941_37317087_37320310
ENSMUSG00000036036.16_37313446_37321524_4	chr17	+	1685	5	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1406.78256582174	1517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37313445	37321524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_37313635_37314177_37314208_37315688_37315796_37316941_37317087_37320310
ENSMUSG00000036036.16_37313446_37321524_5	chr17	+	1712	4	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1458.01973771124	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37313445	37321524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_37313692_37315688_37315796_37316941_37317087_37320310
ENSMUSG00000036036.16_37313446_37321524_6	chr17	+	1663	4	NIC	ENSMUSG00000036036.16	novel	1991	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1475.04508405676	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37313445	37321524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_37313652_37315688_37315796_37316950_37317087_37320310
ENSMUSG00000036036.16_37313446_37321524_7	chr17	+	1652	4	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1458.01973771124	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37313445	37321524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_37313632_37315688_37315796_37316941_37317087_37320310
ENSMUSG00000036036.16_37313446_37321524_8	chr17	+	1702	5	NIC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	1403.50810471475	2240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37313445	37321524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_37313652_37314177_37314208_37315688_37315796_37316941_37317087_37320310
ENSMUSG00000036036.16_37313446_37321524_9	chr17	+	3163	4	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	1458.01973771124	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37313445	37321524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_37313632_37314177_37315796_37316941_37317087_37320310
ENSMUSG00000036057.12_110214150_110216799_1	chr9	-	2195	6	ISM	ENSMUSG00000036057.12	ENSMUST00000040021.12	5346	25	20482	0	-1082	0	3prime_fragment	FALSE	canonical	3	78	junction_2	13.5410487038486	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTCACCTACTGCTGC	NA	False	NA	-3	True	AATAAA	-21	NA	110216799	110214149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798
ENSMUSG00000036061.11_103065967_103071757_1	chr15	-	509	3	ISM	ENSMUSG00000036061.11	ENSMUST00000229371.2	3882	7	3762	4250	-3	-1480	internal_fragment	TRUE	canonical	3	65	junction_2	7.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCTATAGGGGTGAGG	NA	False	NA	NA	False	NA	NA	NA	103071757	103065966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_103066346_103066583_103066655_103071698
ENSMUSG00000036073.18_41755521_41758695_1	chr4	+	1425	10	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-237	0	intron_retention	FALSE	canonical	2	43	junction_2	87.4838962253364	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGAGGAGTAGTGTGGA	0	True	NA	32	True	AATAAA	-33	NA	41755520	41758695	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_41755653_41755960_41756131_41756343_41756423_41756512_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ENSMUSG00000036073.18_41755521_41758695_2	chr4	+	1302	11	FSM	ENSMUSG00000036073.19	ENSMUST00000084695.12	1595	11	293	0	-237	0	multi-exon	FALSE	canonical	2	236	junction_6	31.3438989278615	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGAGGAGTAGTGTGGA	0	True	NA	32	True	AATAAA	-33	NA	41755520	41758695	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ENSMUSG00000036078.17_41738493_41741186_1	chr4	-	1467	4	FSM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	173	0	0	0	multi-exon	FALSE	canonical	3	474	junction_2	54.2647829320883	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTTCCTTATGTGTCTAA	3920	False	NA	NA	False	AATAAA	-17	NA	41741186	41738492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41739581_41740549_41740643_41740775_41740977_41741101
ENSMUSG00000036078.17_41738493_41741320_1	chr4	-	1554	4	NIC	ENSMUSG00000036078.17	novel	1640	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	247.10906274131	1771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTTCCTTATGTGTCTAA	3	True	NA	NA	False	AATAAA	-17	NA	41741320	41738492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_41739581_41740549_41740643_41740822_41740977_41741101
ENSMUSG00000036078.17_41755521_41758695_1	chr4	-	1291	11	NNC	ENSMUSG00000036078.17	novel	1087	3	NA	NA	-2538	-693	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1078	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCCCCGCCCACCCTG	NA	False	NA	NA	False	NA	NA	NA	41758695	41755520	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757166_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ENSMUSG00000036086.17_127914847_128030200_1	chr1	-	2044	13	NIC	ENSMUSG00000036086.17	novel	1913	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	50.1305933426774	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATATGTGTGATTGGTG	NA	False	NA	NA	False	AATAAA	-15	NA	128030200	127914846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_127915137_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029989
ENSMUSG00000036099.17_93805548_93871663_1	chr10	-	2958	12	FSM	ENSMUSG00000036099.17	ENSMUST00000119818.8	11138	12	16	8164	0	-1586	multi-exon	FALSE	canonical	3	20	junction_7	12.5467719993354	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTGCTGGGGTTTG	3411	False	NA	0	True	AATAAA	-19	NA	93871663	93805547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829529_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ENSMUSG00000036099.17_93805548_93871663_2	chr10	-	2946	12	FSM	ENSMUSG00000036099.17	ENSMUST00000047711.13	4479	12	-53	1586	0	-1586	multi-exon	FALSE	canonical	3	26	junction_7	11.4039285676849	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTGCTGGGGTTTG	3411	False	NA	0	True	AATAAA	-19	NA	93871663	93805547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ENSMUSG00000036099.17_93806038_93871663_1	chr10	-	2456	12	FSM	ENSMUSG00000036099.17	ENSMUST00000047711.13	4479	12	-53	2076	0	1140	multi-exon	FALSE	canonical	3	26	junction_7	11.4039285676849	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTGATTGTTCTTTTT	3411	False	NA	-1	True	AATAAA	-17	NA	93871663	93806037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ENSMUSG00000036099.17_93806038_93871663_2	chr10	-	2468	12	FSM	ENSMUSG00000036099.17	ENSMUST00000119818.8	11138	12	16	8654	0	1140	multi-exon	FALSE	canonical	3	20	junction_7	12.5467719993354	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTGATTGTTCTTTTT	3411	False	NA	-1	True	AATAAA	-17	NA	93871663	93806037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829529_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ENSMUSG00000036106.16_84547416_84587874_1	chr15	+	1560	8	NNC	ENSMUSG00000036106.16	novel	1719	9	NA	NA	-6405	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	49.7864828799045	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTCTGCCCCCTGGTG	8465	False	NA	5	True	AATAAA	-15	NA	84547415	84587874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_84547463_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
ENSMUSG00000036111.9_108737779_108774299_1	chr7	-	900	4	FSM	ENSMUSG00000036111.9	ENSMUST00000207178.2	912	4	115	-103	115	0	multi-exon	FALSE	canonical	3	61	junction_1	6.37704215656966	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGACTGCATTGTTCA	NA	False	NA	-4	True	ATTAAA	-18	NA	108774299	108737778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_108738184_108739788_108739915_108742662_108742877_108774144
ENSMUSG00000036112.16_93696790_93725656_1	chr10	-	1959	11	NIC	ENSMUSG00000036112.16	novel	2551	12	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	671.364290084005	5882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATACATTTTAATGTG	NA	False	NA	-16	True	AATAAA	-16	NA	93725656	93696789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715499_93715934_93716001_93722855_93722964_93725399
ENSMUSG00000036112.16_93696790_93725656_2	chr10	-	1999	11	NNC	ENSMUSG00000036112.16	novel	2551	12	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	673.526606749874	5668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATACATTTTAATGTG	NA	False	NA	-16	True	AATAAA	-16	NA	93725656	93696789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_93697465_93698238_93698355_93698791_93698930_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ENSMUSG00000036112.16_93697194_93725656_1	chr10	-	1561	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	20	2843	-10	249	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	1607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACGTCTTTATTTTCTA	NA	False	NA	0	True	ATTAAA	-18	NA	93725656	93697193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ENSMUSG00000036112.16_93697194_93725656_2	chr10	-	1492	11	FSM	ENSMUSG00000036112.16	ENSMUST00000181091.8	1876	11	-19	403	-10	249	multi-exon	FALSE	canonical	3	36	junction_8	660.841047453924	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACGTCTTTATTTTCTA	NA	False	NA	0	True	ATTAAA	-18	NA	93725656	93697193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715436_93715934_93716001_93722855_93722964_93725399
ENSMUSG00000036112.16_93722885_93725656_1	chr10	-	336	2	ISM	ENSMUSG00000036112.16	ENSMUST00000181104.2	931	3	-33	7483	-10	0	5prime_fragment	FALSE	canonical	3	2295	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGGAGAGAGATGACG	NA	False	NA	NA	False	AAAACA	-22	NA	93725656	93722884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_93722964_93725399
ENSMUSG00000036120.11_70583997_70586402_1	chr8	-	1066	4	NNC	ENSMUSG00000036120.11	novel	3282	5	NA	NA	1875	-541	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCAGTGCTACACAGACAC	NA	False	NA	NA	False	NA	NA	NA	70586402	70583996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_70584250_70584567_70584659_70585236_70585299_70585742
ENSMUSG00000036120.11_70583997_70586402_2	chr8	-	1168	5	NNC	ENSMUSG00000036120.11	novel	3282	5	NA	NA	1875	-541	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCAGTGCTACACAGACAC	NA	False	NA	NA	False	NA	NA	NA	70586402	70583996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_70584250_70584573_70584659_70585061_70585168_70585236_70585301_70585742
ENSMUSG00000036120.11_70583997_70586402_3	chr8	-	1167	5	NNC	ENSMUSG00000036120.11	novel	3282	5	NA	NA	1875	-541	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCAGTGCTACACAGACAC	NA	False	NA	NA	False	NA	NA	NA	70586402	70583996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_70584250_70584567_70584659_70585061_70585168_70585236_70585305_70585753
ENSMUSG00000036120.11_70583997_70586402_4	chr8	-	1172	5	NNC	ENSMUSG00000036120.11	novel	3282	5	NA	NA	1875	-541	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCAGTGCTACACAGACAC	NA	False	NA	NA	False	NA	NA	NA	70586402	70583996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_70584250_70584567_70584659_70585061_70585168_70585236_70585299_70585742
ENSMUSG00000036120.11_70583997_70586402_5	chr8	-	1178	5	NNC	ENSMUSG00000036120.11	novel	3282	5	NA	NA	1875	-541	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCAGTGCTACACAGACAC	NA	False	NA	NA	False	NA	NA	NA	70586402	70583996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_70584250_70584567_70584659_70585061_70585168_70585236_70585316_70585753
ENSMUSG00000036120.11_70585916_70591885_1	chr8	-	1260	9	FSM	ENSMUSG00000036120.11	ENSMUST00000212320.2	1121	9	-139	0	-81	0	multi-exon	FALSE	canonical	2	7	junction_5	20.7590341779188	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCAGGGTGCCTCCCA	9464	False	NA	2	True	AATAAA	-18	NA	70591885	70585915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588185_70588282_70588859_70588941_70590678_70590874_70591570
ENSMUSG00000036138.17_119170480_119179365_1	chr9	+	1642	12	FSM	ENSMUSG00000036138.17	ENSMUST00000039784.12	1762	12	120	0	0	0	multi-exon	FALSE	canonical	3	245	junction_2	23.8777880116768	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGTCATTTCCTTCA	7848	False	NA	28	True	AGTAAA	-19	NA	119170479	119179365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119173531_119173575_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ENSMUSG00000036160.14_26780784_26792862_1	chr2	-	2605	5	FSM	ENSMUSG00000036160.14	ENSMUST00000047632.14	2971	5	29	337	0	0	multi-exon	FALSE	canonical	3	256	junction_1	26.2154534578367	851	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGTGTTCGTATTTG	NA	False	NA	-6	True	NA	NA	NA	26792862	26780783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_26782738_26782878_26783080_26789348_26789438_26789740_26789945_26792705
ENSMUSG00000036168.16_93419259_93425568_1	chr10	+	493	4	Fusion	ENSMUSG00000036168.16_ENSMUSG00000097407.2	novel	1859	4	NA	NA	-6016	5379	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14833	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGGCCACCAAAGACGTG	NA	False	NA	NA	False	NA	NA	NA	93419258	93425568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr10_+_93419393_93419891_93419957_93423859_93423986_93425400
ENSMUSG00000036199.10_70346830_70354298_1	chr8	-	489	4	ISM	ENSMUSG00000036199.10	ENSMUST00000110167.5	1251	5	910	0	910	0	3prime_fragment	FALSE	canonical	3	6124	junction_2	115.905133622286	19505	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACTCTATAGTGACTC	NA	False	NA	-20	True	AATAAA	-17	NA	70354298	70346829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_70347061_70347153_70347226_70347891_70347971_70354191
ENSMUSG00000036202.17_51962844_52000755_1	chr2	+	4239	30	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	3018	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	114.82558763923	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACACTCCGACGGTCTT	NA	False	NA	NA	False	AGTAAA	-37	NA	51962843	52000755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983606_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ENSMUSG00000036202.17_52002281_52012127_1	chr2	+	2382	6	FSM	ENSMUSG00000036202.17	ENSMUST00000152178.2	2784	6	136	266	136	6	multi-exon	FALSE	canonical	3	196	junction_2	215.141441846986	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	52002280	52012127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ENSMUSG00000036206.13_88998175_89081515_1	chr1	+	3682	6	FSM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	38	1275	0	-1275	multi-exon	FALSE	canonical	3	96	junction_1	14.3164241345386	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTATGTTCTTTAAAG	NA	False	NA	22	True	AGTAAA	-16	NA	88998174	89081515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_88998320_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ENSMUSG00000036214.15_37269533_37276515_1	chr17	+	1312	3	FSM	ENSMUSG00000036214.15	ENSMUST00000172672.8	652	3	22	-682	0	1	multi-exon	FALSE	canonical	3	30	junction_1	106.5	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCTAATGGTACCA	NA	False	NA	18	True	AATAAA	-18	NA	37269532	37276515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_37269979_37275248_37275325_37275725
ENSMUSG00000036223.17_74329220_74340818_1	chr18	-	1684	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	71	850	0	330	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTACGTCTGGTTCCTTG	6797	False	NA	NA	False	NA	NA	NA	74340818	74329219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
ENSMUSG00000036223.17_74329846_74340850_1	chr18	-	1116	7	NNC	ENSMUSG00000036223.17	novel	2630	7	NA	NA	0	-296	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	150.093766988802	1823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTCAAAACGTACTG	6765	False	NA	-17	True	AGTAAA	-18	NA	74340850	74329845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339833_74339956_74340664
ENSMUSG00000036223.17_74329846_74340850_2	chr18	-	1090	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	39	1476	0	-296	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	2155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTCAAAACGTACTG	6765	False	NA	-17	True	AGTAAA	-18	NA	74340850	74329845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
ENSMUSG00000036241.4_41136058_41191616_1	chr4	+	1521	5	FSM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	315	1764	315	580	multi-exon	FALSE	canonical	3	428	junction_4	37.5857353260516	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGCACTTGGTTGCTATT	26	True	NA	32	True	AATAAA	-21	NA	41136057	41191616	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
ENSMUSG00000036241.4_41136181_41191616_1	chr4	+	1398	5	FSM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	438	1764	438	580	multi-exon	FALSE	canonical	3	428	junction_4	37.5857353260516	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGCACTTGGTTGCTATT	83	False	NA	32	True	AATAAA	-21	NA	41136180	41191616	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
ENSMUSG00000036242.16_49919476_50020840_1	chr14	-	2764	8	FSM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	0	6067	0	-351	multi-exon	FALSE	canonical	3	15	junction_3	7.71693076346829	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTTTCTTGGTTTGGA	NA	False	NA	0	True	AATAAA	-19	NA	50020840	49919475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
ENSMUSG00000036242.16_49919708_50020840_1	chr14	-	2532	8	FSM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	0	6299	0	-583	multi-exon	FALSE	canonical	3	15	junction_3	7.71693076346829	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATCTCACCACCTTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	50020840	49919707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
ENSMUSG00000036270.17_106607513_106615820_1	chr8	+	2390	18	ISM	ENSMUSG00000036270.17	ENSMUST00000040254.16	4780	29	0	4037	0	-344	5prime_fragment	FALSE	canonical	3	268	junction_16	54.7809731321107	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCCTGATGTGATCTCC	3256	False	NA	NA	False	NA	NA	NA	106607512	106615820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735
ENSMUSG00000036291.7_49303999_49312699_1	chr14	+	2017	2	FSM	ENSMUSG00000036291.7	ENSMUST00000228238.2	3514	2	46	1451	0	-1451	multi-exon	FALSE	canonical	3	152	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGACAGGGAAATTGACTT	NA	False	NA	NA	False	AATAAA	-20	NA	49303998	49312699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_49304322_49311005
ENSMUSG00000036291.7_49303999_49323874_1	chr14	+	1812	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	47	4462	0	-948	multi-exon	FALSE	canonical	3	109	junction_2	12.7487494384703	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTGAAAAATTACTGAGT	NA	False	NA	NA	False	NA	NA	NA	49303998	49323874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ENSMUSG00000036291.7_49303999_49324822_1	chr14	+	2760	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	47	3514	0	0	multi-exon	FALSE	canonical	3	109	junction_2	12.7487494384703	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGTGGGTATCATT	NA	False	NA	NA	False	AATAAA	-42	NA	49303998	49324822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ENSMUSG00000036291.7_49303999_49325147_1	chr14	+	3085	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	47	3189	0	271	multi-exon	FALSE	canonical	3	109	junction_2	12.7487494384703	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTGTCTTTTTTTTC	NA	False	NA	33	True	ATTAAA	-18	NA	49303998	49325147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ENSMUSG00000036291.7_49303999_49328255_1	chr14	+	2353	9	NIC	ENSMUSG00000036291.7	novel	2544	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_8	38.1042976578758	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATGATTTCTTATGCT	NA	False	NA	NA	False	AATAAA	-9	NA	49303998	49328255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701_49323817_49327656
ENSMUSG00000036299.6_75138940_75143005_1	chr18	+	865	3	FSM	ENSMUSG00000036299.6	ENSMUST00000236421.2	524	3	0	-341	0	1	multi-exon	FALSE	canonical	3	91	junction_1	354	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	27	True	ATTAAA	-18	NA	75138939	75143005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_75138972_75141721_75141898_75142348
ENSMUSG00000036299.6_75138940_75143005_2	chr18	+	1079	3	FSM	ENSMUSG00000036299.6	ENSMUST00000237263.2	1266	3	-31	218	0	1	multi-exon	FALSE	canonical	3	388	junction_1	205.5	2211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	27	True	ATTAAA	-18	NA	75138939	75143005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_75139186_75141721_75141898_75142348
ENSMUSG00000036309.15_52122864_52137076_1	chr11	+	803	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	28	609	0	197	multi-exon	FALSE	canonical	3	4483	junction_4	346.23483360286	6286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCATTTTGGGCTTTCCC	439	False	NA	-22	True	AATAAA	-27	NA	52122863	52137076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ENSMUSG00000036309.15_52122864_52137501_1	chr11	+	1228	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	28	184	0	-184	multi-exon	FALSE	canonical	3	4483	junction_4	346.23483360286	17987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATGTCATCTTTTTA	439	False	NA	14	True	ATTAAA	-17	NA	52122863	52137501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ENSMUSG00000036371.7_67243995_67261031_1	chr6	+	1353	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	0	264	0	0	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	2419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5872	False	NA	19	True	NA	NA	NA	67243994	67261031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUSG00000036371.7_67243995_67261607_1	chr6	+	1929	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	0	-312	0	312	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	10453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTCATGCATGGTT	5872	False	NA	4	True	AAAACA	-13	NA	67243994	67261607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUSG00000036372.15_10181582_10185182_1	chr19	+	396	4	FSM	ENSMUSG00000036372.15	ENSMUST00000040372.14	606	4	204	6	0	0	multi-exon	FALSE	canonical	3	2797	junction_1	495.826806679734	15732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCCTCATGTCCATTC	4181	False	NA	27	True	AATAAA	-16	NA	10181581	10185182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10181629_10183787_10183898_10184527_10184665_10185080
ENSMUSG00000036376.4_23605713_23608046_1	chr13	-	1284	3	FSM	ENSMUSG00000036376.4	ENSMUST00000041782.4	4456	3	-10	3182	-10	-3182	multi-exon	FALSE	canonical	3	221	junction_1	5.5	1202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTTTAGTTTTTCAT	NA	False	NA	-21	True	AATAAA	-17	NA	23608046	23605712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_23606506_23606652_23606853_23607755
ENSMUSG00000036398.14_37260182_37262605_1	chr17	-	665	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	0	934	0	0	multi-exon	FALSE	canonical	3	708	junction_2	5	2975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGCCTCCGTTCTCCT	NA	False	NA	-15	True	AATATA	-23	NA	37262605	37260181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_37260447_37260768_37260878_37262314
ENSMUSG00000036402.14_66873440_66995257_1	chr6	+	1059	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	33	-344	0	0	multi-exon	FALSE	canonical	2	250	junction_2	52.550504807809	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAGGCTAAAACTGAAAG	NA	False	NA	1	True	AATAAA	-17	NA	66873439	66995257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
ENSMUSG00000036411.11_22322844_22336308_1	chr9	+	1102	2	ISM	ENSMUSG00000036411.11	ENSMUST00000058868.9	2223	7	35	19669	0	-10093	5prime_fragment	FALSE	canonical	3	18	junction_1	0	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTGTGTTCTCTGACTA	NA	False	NA	NA	False	AATAAA	-14	NA	22322843	22336308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_22323046_22335408
ENSMUSG00000036427.6_33901584_33929714_1	chr7	-	2008	18	FSM	ENSMUSG00000036427.6	ENSMUST00000038027.6	2884	18	47	829	0	0	multi-exon	FALSE	canonical	3	1600	junction_15	166.521152162862	11148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGGCTCAGCCTCTTC	NA	False	NA	-41	True	AATAAA	-16	NA	33929714	33901583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ENSMUSG00000036427.6_33901808_33929714_1	chr7	-	1784	18	FSM	ENSMUSG00000036427.6	ENSMUST00000038027.6	2884	18	47	1053	0	0	multi-exon	FALSE	canonical	3	1600	junction_15	166.521152162862	2371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCCTTCTCACCATATG	NA	False	NA	NA	False	NA	NA	NA	33929714	33901807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ENSMUSG00000036438.15_87740840_87754291_1	chr17	-	492	5	NNC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3195.57181893945	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754291	87740839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_87740979_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ENSMUSG00000036438.15_87740840_87754291_10	chr17	-	1124	6	NNC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2867.14627460826	12663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754291	87740839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743354_87750123_87750155_87754220
ENSMUSG00000036438.15_87740840_87754291_11	chr17	-	513	5	NNC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3195.57181893945	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754291	87740839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_87741000_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ENSMUSG00000036438.15_87740840_87754291_12	chr17	-	1110	5	NNC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3032.59397010216	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754291	87740839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87754212
ENSMUSG00000036438.15_87740840_87754291_13	chr17	-	804	5	NNC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3195.57181893945	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754291	87740839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_87741353_87743093_87743139_87743218_87743363_87750123_87750155_87754220
ENSMUSG00000036438.15_87740840_87754291_14	chr17	-	1122	5	NNC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3032.59397010216	2151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754291	87740839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87754200
ENSMUSG00000036438.15_87740840_87754291_2	chr17	-	808	5	NNC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3195.57181893945	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754291	87740839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_87741351_87743087_87743139_87743218_87743363_87750123_87750155_87754220
ENSMUSG00000036438.15_87740840_87754291_3	chr17	-	1120	6	NNC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	172	junction_1	2853.25740864718	10924	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754291	87740839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_87741484_87742516_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ENSMUSG00000036438.15_87740840_87754291_4	chr17	-	623	3	NNC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3777	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754291	87740839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_87741361_87750123_87750155_87754220
ENSMUSG00000036438.15_87740840_87754291_5	chr17	-	753	5	NNC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3195.57181893945	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754291	87740839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_87741240_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ENSMUSG00000036438.15_87740840_87754291_6	chr17	-	1213	5	FSM	ENSMUSG00000036438.15	ENSMUST00000143965.8	890	5	-15	-308	-7	0	multi-exon	FALSE	canonical	3	6557	junction_1	362.950668135492	10131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754291	87740839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_87741484_87742503_87742640_87743031_87743363_87750123_87750155_87754220
ENSMUSG00000036438.15_87740840_87754291_7	chr17	-	1023	6	NNC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2921.95010224336	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754291	87740839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_87741374_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ENSMUSG00000036438.15_87740840_87754291_8	chr17	-	1102	5	FSM	ENSMUSG00000036438.15	ENSMUST00000234406.2	842	5	-7	-253	-7	0	multi-exon	FALSE	canonical	3	65	junction_4	3004.56365384393	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754291	87740839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87754220
ENSMUSG00000036450.5_44551289_44559898_1	chr19	+	1379	8	FSM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	0	4815	0	-4815	multi-exon	FALSE	canonical	3	98	junction_5	13.1583759310508	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	44551288	44559898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
ENSMUSG00000036450.5_44551289_44560364_1	chr19	+	1845	8	FSM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	0	4349	0	-4349	multi-exon	FALSE	canonical	3	98	junction_5	13.1583759310508	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTCCTGTCCCTGTGCT	NA	False	NA	NA	False	AATACA	-27	NA	44551288	44560364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
ENSMUSG00000036478.9_96453217_96455489_1	chr10	+	1470	2	FSM	ENSMUSG00000036478.9	ENSMUST00000038377.9	5001	2	349	3182	-199	959	multi-exon	FALSE	canonical	3	461	junction_1	0	359	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCTCTTGTCATGATTA	NA	False	NA	NA	False	AATAAA	-25	NA	96453216	96455489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_96453335_96454137
ENSMUSG00000036504.7_25463442_25464890_1	chr2	-	591	3	FSM	ENSMUSG00000036504.7	ENSMUST00000039156.7	937	3	346	0	0	0	multi-exon	FALSE	canonical	3	774	junction_2	2.5	3741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGACTTGTGTCTTGC	5546	False	NA	-8	True	ATTAAA	-20	NA	25464890	25463441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_25463712_25464199_25464325_25464694
ENSMUSG00000036504.7_25463442_25464890_2	chr2	-	466	2	NIC	ENSMUSG00000036504.7	novel	937	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGACTTGTGTCTTGC	5546	False	NA	-8	True	ATTAAA	-20	NA	25464890	25463441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_25463712_25464694
ENSMUSG00000036513.16_57553780_57559129_1	chr3	-	975	5	FSM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	7	2010	0	0	multi-exon	FALSE	canonical	3	518	junction_3	10.5593560409714	1633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCTAGACAGTTC	NA	False	NA	-11	True	AATAAA	-19	NA	57559129	57553779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842_57558921_57559007
ENSMUSG00000036528.17_107194414_107344096_1	chr7	+	3340	24	NIC	ENSMUSG00000036528.17	novel	3310	25	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	7.22105721461798	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGAAACATTTTTAATTT	7245	False	NA	NA	False	AATAAA	-20	NA	107194413	107344096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_107194587_107236420_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ENSMUSG00000036533.10_79641400_79650119_1	chr17	-	1856	2	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	10317	-244	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTTATTTGTCGT	NA	False	NA	24	True	NA	NA	NA	79650119	79641399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_79643146_79650009
ENSMUSG00000036533.10_79641400_79662520_1	chr17	-	2021	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	0	244	0	-244	multi-exon	FALSE	canonical	3	71	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTTATTTGTCGT	NA	False	NA	24	True	NA	NA	NA	79662520	79641399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_79643146_79662245
ENSMUSG00000036534.7_96562548_96563164_1	chr8	-	590	2	NNC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	5143	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96563164	96562547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_96563104_96563130
ENSMUSG00000036550.17_96466534_96534073_1	chr8	-	4973	34	ISM	ENSMUSG00000036550.17	ENSMUST00000068452.10	8152	48	-64	20448	-12	3268	5prime_fragment	FALSE	canonical	3	469	junction_15	180.181940494714	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGCCGTCTATGAAGAG	NA	False	NA	NA	False	AAAAAG	-39	NA	96534073	96466533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ENSMUSG00000036550.17_96482768_96534073_1	chr8	-	2564	18	ISM	ENSMUSG00000036550.17	ENSMUST00000211887.2	8364	49	19	36682	-12	-1174	5prime_fragment	FALSE	canonical	3	77	junction_15	280.210474526921	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAACGGCCTTCAGTGGG	NA	False	NA	NA	False	NA	NA	NA	96534073	96482767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501351_96501906_96502015_96515257_96515533_96533960
ENSMUSG00000036550.17_96482768_96534073_2	chr8	-	2570	18	ISM	ENSMUSG00000036550.17	ENSMUST00000213006.2	7479	48	-49	35984	-12	-1174	5prime_fragment	FALSE	canonical	3	1066	junction_12	81.0395264318015	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAACGGCCTTCAGTGGG	NA	False	NA	NA	False	NA	NA	NA	96534073	96482767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ENSMUSG00000036550.17_96482768_96534073_3	chr8	-	2563	18	NNC	ENSMUSG00000036550.17	novel	7479	48	NA	NA	-12	-1174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	298.747384925793	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAACGGCCTTCAGTGGG	NA	False	NA	NA	False	NA	NA	NA	96534073	96482767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_96482922_96483969_96484121_96486733_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ENSMUSG00000036552.20_15264400_15272792_1	chr17	+	632	3	NNC	ENSMUSG00000036552.20	novel	1019	4	NA	NA	-257	466	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCCTTCTCCCCACCA	NA	False	NA	NA	False	NA	NA	NA	15264399	15272792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_15264753_15271322_15271527_15272717
ENSMUSG00000036552.20_15273104_15284485_1	chr17	+	1680	8	NIC	ENSMUSG00000036552.20	novel	1342	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	29.1694556489685	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGAACTCTATGTTGC	NA	False	NA	5	True	ATTAAA	-18	NA	15273103	15284485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_15273346_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
ENSMUSG00000036572.17_36355331_36373975_1	chrX	-	2383	11	NIC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_3	55.9360348970143	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	False	NA	-1	True	AATAAA	-24	NA	36373975	36355330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_36356315_36359174_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ENSMUSG00000036572.17_36355331_36373975_2	chrX	-	1639	12	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.0383481798478	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	False	NA	-1	True	AATAAA	-24	NA	36373975	36355330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_36355463_36356206_36356315_36359174_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ENSMUSG00000036572.17_36366100_36373980_1	chrX	-	893	5	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	-5	-4997	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	116.215317406958	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGACTCTCTAATTC	NA	False	NA	NA	False	NA	NA	NA	36373980	36366099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_36366428_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ENSMUSG00000036580.16_55019534_55043378_1	chr3	+	2400	9	FSM	ENSMUSG00000036580.16	ENSMUST00000044116.14	3770	9	5	1365	0	-1354	multi-exon	FALSE	canonical	0	0	junction_4	65.469339197826	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAATGTCAACCTATTTTT	NA	False	NA	15	True	AATAAA	-26	NA	55019533	55043378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036617.18_20524429_20673043_1	chr2	+	949	4	NNC	ENSMUSG00000036617.18	novel	3074	4	NA	NA	-173	5916	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	82.3097132110718	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGCCTTGGTTGTGATG	4623	False	NA	NA	False	NA	NA	NA	20524428	20673043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20672887
ENSMUSG00000036617.18_20524622_20673043_1	chr2	+	756	4	NNC	ENSMUSG00000036617.18	novel	3074	4	NA	NA	0	5916	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	82.3097132110718	149	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGCCTTGGTTGTGATG	4816	False	NA	NA	False	NA	NA	NA	20524621	20673043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20672887
ENSMUSG00000036632.10_54641953_54656858_1	chr3	+	1188	10	NNC	ENSMUSG00000036632.10	novel	1471	10	NA	NA	-1007	-358	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	151.571113570943	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTTGTATATTCTTG	NA	False	NA	21	True	AATAAA	-25	NA	54641952	54656858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_54642139_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ENSMUSG00000036632.10_54642980_54656858_1	chr3	+	1093	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	20	358	0	-358	multi-exon	FALSE	canonical	3	432	junction_5	39.5777091521022	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTTGTATATTCTTG	NA	False	NA	21	True	AATAAA	-25	NA	54642979	54656858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ENSMUSG00000036639.13_140317664_140323892_2	chr5	+	982	5	NNC	ENSMUSG00000036639.13	novel	954	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	84.8071341338687	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTGTGACTACAGCG	NA	False	NA	10	True	NA	NA	NA	140317663	140323892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_140317711_140318149_140318229_140320209_140320375_140321067_140321214_140323347
ENSMUSG00000036646.14_25222774_25241152_1	chr2	+	2650	13	FSM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	33	1072	0	-1072	multi-exon	FALSE	canonical	3	302	junction_8	34.4394597647653	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTGGTATAATGTGATC	3998	False	NA	8	True	AGTAAA	-19	NA	25222773	25241152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ENSMUSG00000036678.9_102246691_102259122_1	chr15	-	1665	16	NNC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_15	126.968482528364	2226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCAGGATGTAACTCCG	NA	False	NA	-9	True	AATAAA	-21	NA	102259122	102246690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102259000
ENSMUSG00000036678.9_102246691_102259181_1	chr15	-	1788	16	NNC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	0	0	intron_retention	FALSE	canonical	2	12	junction_5	126.445877750127	2357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCAGGATGTAACTCCG	NA	False	NA	-9	True	AATAAA	-21	NA	102259181	102246690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247848_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
ENSMUSG00000036693.13_34807860_34817492_1	chr5	-	1204	8	ISM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	0	11980	0	-6467	5prime_fragment	FALSE	canonical	3	566	junction_3	32.9408870678421	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGCCATGAGGACTCAGA	NA	False	NA	33	True	NA	NA	NA	34817492	34807859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ENSMUSG00000036721.15_21546990_21553994_1	chr13	+	1940	4	FSM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	0	2465	0	0	multi-exon	FALSE	canonical	3	44	junction_1	12.0277457017791	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCTGTATACTGTCCTT	NA	False	NA	8	True	CATAAA	-13	NA	21546989	21553994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_21547043_21547749_21548222_21550784_21550927_21552721
ENSMUSG00000036743.5_14839246_14855807_1	chr18	+	531	3	NNC	ENSMUSG00000036743.5	novel	1023	6	NA	NA	0	-8721	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	43	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTTTTGCATTGATTGT	NA	False	NA	NA	False	NA	NA	NA	14839245	14855807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_14839390_14854223_14854351_14855547
ENSMUSG00000036748.17_46318985_46327047_1	chr19	-	779	9	NNC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	383.15205858771	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5874	False	NA	-8	True	AGTAAA	-13	NA	46327047	46318984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_46319006_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46327007
ENSMUSG00000036748.17_46318985_46327047_2	chr19	-	1108	10	NIC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_9	408.839308588244	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5874	False	NA	-8	True	AGTAAA	-13	NA	46327047	46318984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321138_46326751_46326870_46327007
ENSMUSG00000036748.17_46318985_46327047_3	chr19	-	1214	10	NIC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_9	344.205723727706	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5874	False	NA	-8	True	AGTAAA	-13	NA	46327047	46318984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326870_46326958
ENSMUSG00000036748.17_46318985_46327099_1	chr19	-	1223	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	87	junction_5	400.438925846793	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5822	False	NA	-8	True	AGTAAA	-13	NA	46327099	46318984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320080_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46326958
ENSMUSG00000036748.17_46318985_46327099_2	chr19	-	1199	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	123	junction_9	390.981102129275	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5822	False	NA	-8	True	AGTAAA	-13	NA	46327099	46318984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321138_46326751_46326860_46326958
ENSMUSG00000036748.17_46318985_46327099_3	chr19	-	670	5	NIC	ENSMUSG00000036748.17	novel	1833	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	450.065759084159	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5822	False	NA	-8	True	AGTAAA	-13	NA	46327099	46318984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_46319274_46319358_46319420_46320351_46320496_46321056_46321141_46327007
ENSMUSG00000036748.17_46318985_46327099_4	chr19	-	777	9	NNC	ENSMUSG00000036748.17	novel	1833	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	394.434860750162	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5822	False	NA	-8	True	AGTAAA	-13	NA	46327099	46318984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_46319006_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46327007
ENSMUSG00000036748.17_46318985_46327099_5	chr19	-	1207	10	FSM	ENSMUSG00000036748.17	ENSMUST00000167861.8	1941	10	0	734	0	0	multi-exon	FALSE	canonical	3	50	junction_9	353.322781114268	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5822	False	NA	-8	True	AGTAAA	-13	NA	46327099	46318984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46327007
ENSMUSG00000036748.17_46318985_46327099_6	chr19	-	1355	9	ISM	ENSMUSG00000036748.17	ENSMUST00000236061.2	1164	10	-36	2	0	0	intron_retention	FALSE	canonical	3	415	junction_8	247.19526694498	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5822	False	NA	-8	True	AGTAAA	-13	NA	46327099	46318984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751
ENSMUSG00000036748.17_46318985_46327099_7	chr19	-	1209	10	NIC	ENSMUSG00000036748.17	novel	999	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	89	junction_9	397.279576278966	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5822	False	NA	-8	True	AGTAAA	-13	NA	46327099	46318984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321138_46326751_46326870_46326958
ENSMUSG00000036751.8_30316399_30325539_3	chr7	-	451	4	NNC	ENSMUSG00000036751.8	novel	618	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2659.70491262137	26175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATTGTGTGTATTACAC	NA	False	NA	-4	True	AATAAA	-18	NA	30325539	30316398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_30316588_30322839_30322924_30323924_30324039_30325475
ENSMUSG00000036752.5_25113006_25114669_1	chr2	-	719	4	FSM	ENSMUSG00000036752.5	ENSMUST00000043584.5	1598	4	45	834	-3	529	multi-exon	FALSE	canonical	3	1343	junction_2	25.8499946271217	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACCCACTTACGGTGAC	NA	False	NA	NA	False	AATGAA	-38	NA	25114669	25113005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_25113381_25113945_25114057_25114135_25114245_25114545
ENSMUSG00000036768.7_122780144_122820175_1	chr9	+	1767	15	ISM	ENSMUSG00000036768.7	ENSMUST00000040717.7	4858	35	33	27623	0	-1647	5prime_fragment	FALSE	canonical	3	157	junction_12	25.6436529920273	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAAAGAATCAAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	122780143	122820175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150
ENSMUSG00000036775.14_26300204_26309194_1	chr17	-	2083	9	NNC	ENSMUSG00000036775.14	novel	1993	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.6149273601936	1597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGATTCTACCATGGA	NA	False	NA	-23	True	NA	NA	NA	26309194	26300203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_26301231_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
ENSMUSG00000036782.14_23085525_23185144_1	chrX	-	3377	9	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-3726	0	at_least_one_novel_splicesite	FALSE	canonical	3	201	junction_6	415.817192405509	100411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGTGCCATGCC	NA	False	NA	-23	True	AATAAA	-14	NA	23185144	23085524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23184851
ENSMUSG00000036782.14_23085525_23227934_1	chrX	-	3220	8	ISM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	3387	15	3358	0	3prime_fragment	FALSE	canonical	3	772	junction_6	153.107671864193	1361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGTGCCATGCC	NA	False	NA	-23	True	AATAAA	-14	NA	23227934	23085524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23227732
ENSMUSG00000036782.14_23085525_23227934_2	chrX	-	3286	9	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3358	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_6	366.28779668452	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGTGCCATGCC	NA	False	NA	-23	True	AATAAA	-14	NA	23227934	23085524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23227732
ENSMUSG00000036782.14_23085525_23231292_1	chrX	-	3273	10	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_6	389.833899418461	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGTGCCATGCC	NA	False	NA	-23	True	AATAAA	-14	NA	23231292	23085524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23227732_23227824_23231194
ENSMUSG00000036782.14_23086481_23185144_1	chrX	-	2421	9	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-3726	-956	at_least_one_novel_splicesite	FALSE	canonical	3	201	junction_6	415.817192405509	99900	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATTGATGTTACTTGT	NA	False	NA	NA	False	NA	NA	NA	23185144	23086480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23184851
ENSMUSG00000036782.14_23086481_23227934_1	chrX	-	2330	9	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3358	-956	combination_of_known_junctions	FALSE	canonical	3	201	junction_6	366.28779668452	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATTGATGTTACTTGT	NA	False	NA	NA	False	NA	NA	NA	23227934	23086480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23227732
ENSMUSG00000036782.14_23086481_23227934_2	chrX	-	2264	8	ISM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	3387	971	3358	-956	3prime_fragment	FALSE	canonical	3	772	junction_6	153.107671864193	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATTGATGTTACTTGT	NA	False	NA	NA	False	NA	NA	NA	23227934	23086480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23227732
ENSMUSG00000036810.17_88845397_88858315_1	chr8	+	1364	6	NIC	ENSMUSG00000036810.17	novel	1731	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_5	70.6070817977914	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGTGTGGTTTATT	NA	False	NA	17	True	NA	NA	NA	88845396	88858315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88857363
ENSMUSG00000036810.17_88845397_88861141_1	chr8	+	1138	6	FSM	ENSMUSG00000036810.17	ENSMUST00000095214.10	1731	6	0	593	0	33	multi-exon	FALSE	canonical	3	147	junction_2	26.3256528883901	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGAATGTACAAGTTAAAA	NA	False	NA	NA	False	ACTAAA	-43	NA	88845396	88861141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
ENSMUSG00000036817.15_139186422_139235550_1	chr5	+	3591	19	NIC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_6	224.162701328001	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186421	139235550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUSG00000036817.15_139186422_139235550_2	chr5	+	3756	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	225.20792614826	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186421	139235550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUSG00000036820.13_24374807_24399669_1	chr17	-	1553	12	Fusion	ENSMUSG00000036820.13_ENSMUSG00000036473.17	novel	1496	11	NA	NA	460	0	multi-exon	FALSE	canonical	0	0	junction_11	98.5257444227121	625	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24399669	24374806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555_24382748_24399619
ENSMUSG00000036820.13_24374807_24399669_10	chr17	-	1507	12	Fusion	ENSMUSG00000036820.13_ENSMUSG00000036473.17	novel	1496	11	NA	NA	460	0	multi-exon	FALSE	non_canonical	0	0	junction_11	98.5257444227121	471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24399669	24374806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555_24382702_24399619
ENSMUSG00000036820.13_24374807_24399669_11	chr17	-	1488	12	Fusion	ENSMUSG00000036820.13_ENSMUSG00000036473.17	novel	1496	11	NA	NA	460	0	multi-exon	FALSE	non_canonical	0	0	junction_11	98.5257444227121	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24399669	24374806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555_24382683_24399619
ENSMUSG00000036820.13_24374807_24399669_2	chr17	-	1544	12	Fusion	ENSMUSG00000036820.13_ENSMUSG00000036473.17	novel	1496	11	NA	NA	460	0	multi-exon	FALSE	canonical	0	0	junction_11	98.5257444227121	636	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24399669	24374806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555_24382739_24399619
ENSMUSG00000036820.13_24374807_24399669_3	chr17	-	1483	12	Fusion	ENSMUSG00000036820.13_ENSMUSG00000036473.17	novel	1496	11	NA	NA	460	0	multi-exon	FALSE	canonical	0	0	junction_11	98.5257444227121	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24399669	24374806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555_24382664_24399605
ENSMUSG00000036820.13_24374807_24399669_4	chr17	-	1469	12	Fusion	ENSMUSG00000036820.13_ENSMUSG00000036473.17	novel	1496	11	NA	NA	460	0	multi-exon	FALSE	canonical	0	0	junction_11	98.5257444227121	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24399669	24374806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555_24382664_24399619
ENSMUSG00000036820.13_24374807_24399669_5	chr17	-	1537	12	Fusion	ENSMUSG00000036820.13_ENSMUSG00000036473.17	novel	1496	11	NA	NA	460	0	multi-exon	TRUE	canonical	0	0	junction_11	98.5257444227121	539	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24399669	24374806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555_24382732_24399619
ENSMUSG00000036820.13_24374807_24399669_6	chr17	-	1513	12	Fusion	ENSMUSG00000036820.13_ENSMUSG00000036473.17	novel	1496	11	NA	NA	460	0	multi-exon	FALSE	non_canonical	0	0	junction_11	98.5257444227121	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24399669	24374806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555_24382708_24399619
ENSMUSG00000036820.13_24374807_24399669_7	chr17	-	1572	12	Fusion	ENSMUSG00000036820.13_ENSMUSG00000036473.17	novel	1496	11	NA	NA	460	0	multi-exon	FALSE	canonical	0	0	junction_11	98.5257444227121	639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24399669	24374806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555_24382767_24399619
ENSMUSG00000036820.13_24374807_24399669_8	chr17	-	1527	12	Fusion	ENSMUSG00000036820.13_ENSMUSG00000036473.17	novel	1496	11	NA	NA	460	0	multi-exon	FALSE	non_canonical	0	0	junction_11	98.5257444227121	481	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24399669	24374806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555_24382708_24399605
ENSMUSG00000036820.13_24374807_24399669_9	chr17	-	1504	12	Fusion	ENSMUSG00000036820.13_ENSMUSG00000036473.17	novel	1496	11	NA	NA	460	0	multi-exon	FALSE	non_canonical	0	0	junction_11	98.5257444227121	491	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24399669	24374806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555_24382685_24399605
ENSMUSG00000036835.8_30261288_30262666_1	chr7	-	659	4	NIC	ENSMUSG00000036835.8	novel	708	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	381.68660792156	1890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTTCTTGGGATCTTTC	1290	False	NA	-3	True	AATAAA	-19	NA	30262666	30261287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_30261560_30261748_30261854_30262220_30262313_30262476
ENSMUSG00000036835.8_30262761_30264785_1	chr7	-	839	8	Genic_Genomic	ENSMUSG00000036835.8	novel	488	4	NA	NA	-1733	-969	multi-exon	FALSE	non_canonical	0	0	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCTGCTCCTTGCGTCAC	NA	False	NA	NA	False	NA	NA	NA	30264785	30262760	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_30262825_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ENSMUSG00000036835.8_30262761_30264785_2	chr7	-	789	8	Genic_Genomic	ENSMUSG00000036835.8	novel	488	4	NA	NA	-1733	-969	multi-exon	FALSE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCTGCTCCTTGCGTCAC	NA	False	NA	NA	False	NA	NA	NA	30264785	30262760	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_30262775_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ENSMUSG00000036835.8_30262761_30264785_3	chr7	-	768	7	Genic_Genomic	ENSMUSG00000036835.8	novel	488	4	NA	NA	-1733	-969	multi-exon	FALSE	non_canonical	0	0	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCTGCTCCTTGCGTCAC	NA	False	NA	NA	False	NA	NA	NA	30264785	30262760	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264519
ENSMUSG00000036835.8_30262761_30264785_4	chr7	-	864	8	Genic_Genomic	ENSMUSG00000036835.8	novel	488	4	NA	NA	-1733	-969	multi-exon	FALSE	non_canonical	0	0	junction_1	0	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCTGCTCCTTGCGTCAC	NA	False	NA	NA	False	NA	NA	NA	30264785	30262760	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ENSMUSG00000036845.13_30254869_30259073_1	chr7	-	1123	9	FSM	ENSMUSG00000036845.13	ENSMUST00000108164.8	1312	9	190	-1	-2	0	multi-exon	FALSE	canonical	3	52	junction_8	74.6976196073208	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACAAATCTCAAGTGCAT	4883	False	NA	-9	True	NA	NA	NA	30259073	30254868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257510_30258866
ENSMUSG00000036854.15_30238559_30251730_1	chr7	+	2503	12	Fusion	ENSMUSG00000036854.15_ENSMUSG00000109102.2	novel	1980	3	NA	NA	-532	-2339	multi-exon	FALSE	non_canonical	0	0	junction_1	0	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCGCCCCTTTCTGGCT	6228	False	NA	NA	False	NA	NA	NA	30238558	30251730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr7_+_30239008_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245651_30245727_30245853_30248465_30248634_30249031_30249129_30250182_30250260_30251632
ENSMUSG00000036854.15_30238559_30251730_2	chr7	+	2426	11	Fusion	ENSMUSG00000036854.15_ENSMUSG00000109102.2	novel	1980	3	NA	NA	-532	-2339	multi-exon	FALSE	non_canonical	0	0	junction_1	0	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCGCCCCTTTCTGGCT	6228	False	NA	NA	False	NA	NA	NA	30238558	30251730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr7_+_30239008_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245651_30245727_30245853_30248465_30248634_30249031_30249129_30251632
ENSMUSG00000036854.15_30251949_30254865_1	chr7	+	2104	3	FSM	ENSMUSG00000036854.15_ENSMUSG00000106236.3	ENSMUST00000044048.8	1363	3	-744	3	0	0	multi-exon	FALSE	canonical	3	14	junction_1	10.5	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGCCTTATGTCTGGGC	NA	False	NA	9	True	AATAAA	-17	NA	30251948	30254865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30252958_30253686_30253810_30253893
ENSMUSG00000036860.15_59093331_59096714_1	chr11	+	681	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	13	246	0	0	multi-exon	FALSE	canonical	3	484	junction_1	41.3467720088952	2078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTCATTGTCTTCTT	NA	False	NA	9	True	NA	NA	NA	59093330	59096714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
ENSMUSG00000036860.15_59093331_59096714_2	chr11	+	395	2	NIC	ENSMUSG00000036860.15	novel	718	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTCATTGTCTTCTT	NA	False	NA	9	True	NA	NA	NA	59093330	59096714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_59093486_59096474
ENSMUSG00000036860.15_59093331_59096714_3	chr11	+	741	4	NIC	ENSMUSG00000036860.15	novel	729	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	265.067287054941	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTCATTGTCTTCTT	NA	False	NA	9	True	NA	NA	NA	59093330	59096714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_59093546_59094997_59095082_59095381_59095584_59096474
ENSMUSG00000036875.16_62782805_62785816_1	chr10	+	999	2	FSM	ENSMUSG00000036875.16	ENSMUST00000131715.2	603	2	-54	-342	0	342	multi-exon	FALSE	canonical	3	331	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTATGATTTTGGGTT	NA	False	NA	NA	False	AATAAA	-13	NA	62782804	62785816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_62782949_62784961
ENSMUSG00000036875.16_62782805_62809546_1	chr10	+	3705	21	NNC	ENSMUSG00000036875.16	novel	3651	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	84.7772964890955	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGGAGATCAGAGGACTA	NA	False	NA	NA	False	NA	NA	NA	62782804	62809546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805558_62805738_62807622_62807770_62809024
ENSMUSG00000036875.16_62782805_62809964_1	chr10	+	4123	21	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	84.7772964890955	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGAGTCATTTTTCAT	NA	False	NA	59	True	AATAAA	-20	NA	62782804	62809964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805558_62805738_62807622_62807770_62809024
ENSMUSG00000036879.16_86567645_86738243_1	chr8	+	1680	17	ISM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	14	49762	0	-18777	5prime_fragment	FALSE	canonical	3	66	junction_1	20.3976101541333	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGGTGGAACCCATTC	NA	False	NA	NA	False	AATACA	-24	NA	86567644	86738243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198
ENSMUSG00000036898.17_138439741_138455715_1	chr5	+	2056	5	FSM	ENSMUSG00000036898.17	ENSMUST00000100524.3	869	5	-61	-1126	0	1126	multi-exon	FALSE	canonical	3	9	junction_4	23.7276210354093	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGGGTCTCTGTTGAAA	NA	False	NA	NA	False	NA	NA	NA	138439740	138455715	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138439892_138443013_138443141_138445776_138445870_138453241_138453352_138454140
ENSMUSG00000036898.17_138439741_138455929_1	chr5	+	2270	5	FSM	ENSMUSG00000036898.17	ENSMUST00000100524.3	869	5	-61	-1340	0	1340	multi-exon	FALSE	canonical	3	9	junction_4	23.7276210354093	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGCTTATGTTCCGTT	NA	False	NA	NA	False	AATAAA	-13	NA	138439740	138455929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138439892_138443013_138443141_138445776_138445870_138453241_138453352_138454140
ENSMUSG00000036898.17_138439741_138456925_1	chr5	+	3266	5	FSM	ENSMUSG00000036898.17	ENSMUST00000100524.3	869	5	-61	-2336	0	-2031	multi-exon	FALSE	canonical	3	9	junction_4	23.7276210354093	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAATGACGGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	138439740	138456925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138439892_138443013_138443141_138445776_138445870_138453241_138453352_138454140
ENSMUSG00000036916.14_47631205_47683278_2	chrX	-	3291	20	FSM	ENSMUSG00000036916.14	ENSMUST00000072292.12	4045	20	51	703	-10	430	multi-exon	FALSE	canonical	3	45	junction_17	15.8598431908636	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATCTACATTTGTAAT	NA	False	NA	NA	False	TTTAAA	-34	NA	47683278	47631204	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47683240
ENSMUSG00000036916.14_47648596_47683278_1	chrX	-	1317	12	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	-10	-16961	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	30.3374955519343	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGCTCCAGTGCCACAT	NA	False	NA	NA	False	NA	NA	NA	47683278	47648595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47682390_47682476_47683240
ENSMUSG00000036928.15_138278788_138310655_1	chr5	+	4181	34	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_21	31.5754667583886	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGACTTGAGATTGTCA	NA	False	NA	20	True	AATAAA	-20	NA	138278787	138310655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298478_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ENSMUSG00000036932.15_47563821_47602313_1	chrX	-	2104	16	NNC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	301.286530288583	2715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	-1	True	ATTAAA	-16	NA	47602313	47563820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586330_47588648_47588749_47593686_47593830_47602112
ENSMUSG00000036932.15_47563821_47602313_2	chrX	-	2110	16	FSM	ENSMUSG00000036932.15	ENSMUST00000037349.8	2237	16	127	0	-10	0	multi-exon	FALSE	canonical	3	1039	junction_9	82.1482129378898	2712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	-1	True	ATTAAA	-16	NA	47602313	47563820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ENSMUSG00000036934.10_86135388_86159443_1	chr8	-	1562	4	NNC	ENSMUSG00000036934.10	novel	1587	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	137.162515125509	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCATACCAGTGTGG	NA	False	NA	94	True	ATTAAA	-21	NA	86159443	86135387	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_86136520_86138747_86138925_86153488_86153586_86159287
ENSMUSG00000036941.3_73870596_73887550_1	chr18	-	2484	4	FSM	ENSMUSG00000036941.3	ENSMUST00000041138.3	4971	4	0	2487	0	-2487	multi-exon	FALSE	canonical	3	22	junction_1	4.32049379893857	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGGAGTTTATTATCAGA	NA	False	NA	NA	False	AATAAA	-24	NA	73887550	73870595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_73872372_73875407_73875873_73880237_73880403_73887472
ENSMUSG00000036968.16_138185747_138191905_1	chr5	+	1580	6	FSM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	0	275	0	-275	multi-exon	FALSE	canonical	3	120	junction_5	26.1350339582714	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTGAGTCCCATTTCAA	5598	False	NA	16	True	ATTAAA	-16	NA	138185746	138191905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138185983_138188531_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
ENSMUSG00000036975.6_119837440_119840938_1	chr1	-	1521	2	FSM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	0	1820	0	-1820	multi-exon	FALSE	canonical	3	113	junction_1	0	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCTCTGAATTCCAGTG	NA	False	NA	-10	True	AATAAA	-18	NA	119840938	119837439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_119838885_119840862
ENSMUSG00000036977.9_80438449_80501979_1	chr8	+	656	4	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	0	8	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	234.810561943027	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAGTCAATCTTTAAAT	NA	False	NA	10	True	AATAAA	-28	NA	80438448	80501979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_80438474_80446286_80446378_80455758_80455880_80501560
ENSMUSG00000036977.9_80438449_80501979_2	chr8	+	783	5	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	0	8	combination_of_known_splicesites	FALSE	canonical	3	195	junction_1	137.767920794356	1625	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAGTCAATCTTTAAAT	NA	False	NA	10	True	AATAAA	-28	NA	80438448	80501979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80455758_80455880_80501560
ENSMUSG00000036977.9_80438449_80501979_3	chr8	+	662	4	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	0	8	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	212.071266847308	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAGTCAATCTTTAAAT	NA	False	NA	10	True	AATAAA	-28	NA	80438448	80501979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80501560
ENSMUSG00000036977.9_80438449_80502037_1	chr8	+	720	4	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	0	66	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	212.071266847308	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAAGATATATATACTAT	NA	False	NA	17	True	ATTAAA	-23	NA	80438448	80502037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80501560
ENSMUSG00000036977.9_80438449_80502037_2	chr8	+	841	5	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	0	66	combination_of_known_splicesites	FALSE	canonical	3	195	junction_1	137.767920794356	1817	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAAGATATATATACTAT	NA	False	NA	17	True	ATTAAA	-23	NA	80438448	80502037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80455758_80455880_80501560
ENSMUSG00000036980.14_138176879_138185478_1	chr5	-	2288	15	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	200.074526930668	842	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1962	False	NA	-4	True	AATAAA	-18	NA	138185478	138176878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181000_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ENSMUSG00000036983.8_3569531_3608030_1	chr17	-	1224	6	NIC	ENSMUSG00000036983.8	novel	1402	7	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	33.0611554547024	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAACCTAACAGCTCAAA	NA	False	NA	NA	False	AATAAA	-16	NA	3608030	3569530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_3570071_3571919_3572048_3586352_3586473_3595857_3595967_3605206_3605359_3607855
ENSMUSG00000036986.17_58125825_58157069_1	chr9	-	2942	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	123.069989120915	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2151	False	NA	-13	True	NA	NA	NA	58157069	58125824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ENSMUSG00000036986.17_58125825_58157069_2	chr9	-	3877	8	FSM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	0	466	0	0	multi-exon	FALSE	canonical	3	178	junction_4	73.8752395624418	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2151	False	NA	-13	True	NA	NA	NA	58157069	58125824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ENSMUSG00000036986.17_58126928_58157069_1	chr9	-	2774	8	FSM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	0	1569	0	106	multi-exon	FALSE	canonical	3	178	junction_4	73.8752395624418	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTCCCTTCTAAAAGCC	2151	False	NA	NA	False	NA	NA	NA	58157069	58126927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ENSMUSG00000036986.17_58128592_58157069_1	chr9	-	2393	8	FSM	ENSMUSG00000036986.17	ENSMUST00000153820.8	2652	8	0	259	0	-259	multi-exon	FALSE	canonical	3	249	junction_3	51.5692520316326	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTGGCAGTAATCTACT	2151	False	NA	NA	False	NA	NA	NA	58157069	58128591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ENSMUSG00000037001.11_58779821_58795051_1	chr11	-	3048	5	FSM	ENSMUSG00000037001.11	ENSMUST00000102703.2	3890	5	0	842	0	-842	multi-exon	FALSE	canonical	3	42	junction_4	4.94974746830583	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTCTGTCAGAGCACA	7184	False	NA	-2	True	AATAAA	-14	NA	58795051	58779820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568_58793734_58794940
ENSMUSG00000037007.18_138141363_138154016_1	chr5	-	3081	5	FSM	ENSMUSG00000037007.18	ENSMUST00000049393.15	6470	5	-10	3399	-10	1566	multi-exon	TRUE	canonical	3	14	junction_2	1.4790199457749	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTGTGTATCAGTGGGT	1701	False	NA	NA	False	ACTAAA	-13	NA	138154016	138141362	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_138143975_138148868_138148996_138149466_138149559_138151106_138151232_138153891
ENSMUSG00000037013.18_14758686_14815823_1	chr18	-	2746	9	NIC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	296.915812984085	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	-19	True	AATAAA	-17	NA	14815823	14758685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_14760369_14766599_14766734_14769552_14769676_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ENSMUSG00000037020.17_29967249_29979844_1	chr7	-	1088	8	ISM	ENSMUSG00000037020.17	ENSMUST00000108190.8	4742	33	0	27686	0	-18002	5prime_fragment	FALSE	canonical	3	155	junction_3	16.952514713223	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTACCTGGGAGTGGACG	NA	False	NA	NA	False	NA	NA	NA	29979844	29967248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ENSMUSG00000037022.4_79994537_80021566_1	chr8	-	739	5	NIC	ENSMUSG00000037022.4	novel	5650	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	28.7782469931718	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTAGAGTTTCCCTGA	NA	False	NA	-6	True	AATAAA	-17	NA	80021566	79994536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80021542
ENSMUSG00000037022.4_79994537_80021566_2	chr8	-	1340	7	FSM	ENSMUSG00000037022.4	ENSMUST00000048718.4	5650	7	0	4310	0	0	multi-exon	FALSE	canonical	3	29	junction_6	17.5214154679352	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTAGAGTTTCCCTGA	NA	False	NA	-6	True	AATAAA	-17	NA	80021566	79994536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007805_80008284_80021542
ENSMUSG00000037029.9_29859917_29869152_1	chr7	-	2806	2	FSM	ENSMUSG00000037029.9	ENSMUST00000062181.9	2029	2	0	-777	0	777	multi-exon	FALSE	canonical	3	29	junction_1	0	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATTCTTAAATCCTTCT	NA	False	NA	-4	True	ATTAAA	-14	NA	29869152	29859916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_29862654_29869083
ENSMUSG00000037031.11_62023134_62067030_1	chr10	-	1679	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	0	1959	0	354	multi-exon	TRUE	canonical	3	242	junction_7	11.6303613925986	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGTTTGGAAGTCT	4876	False	NA	0	True	AATAAA	-27	NA	62067030	62023133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
ENSMUSG00000037058.17_35731694_35749481_1	chr18	+	693	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	24	758	0	39	multi-exon	FALSE	canonical	3	2803	junction_2	114.719948860983	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGTCACACAATTACT	4664	False	NA	18	True	AATAAA	-25	NA	35731693	35749481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
ENSMUSG00000037058.17_35731694_35749600_1	chr18	+	812	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	24	639	0	28	multi-exon	FALSE	canonical	3	2803	junction_2	114.719948860983	2198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATTGTCTGTCTTTGAG	4664	False	NA	9	True	ATTAAA	-17	NA	35731693	35749600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
ENSMUSG00000037062.14_144396828_144425871_1	chr3	-	1513	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	225	2223	0	279	multi-exon	TRUE	canonical	3	282	junction_5	25.8444868395563	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGTGACTCATTTATTA	NA	False	NA	-3	True	AATAAA	-15	NA	144425871	144396827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
ENSMUSG00000037070.11_79231898_79235528_1	chr8	-	1644	2	NNC	ENSMUSG00000037070.11	novel	1695	2	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	4321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCTTGATTTCTCC	NA	False	NA	NA	False	AGTAAA	-18	NA	79235528	79231897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_79233441_79235427
ENSMUSG00000037070.11_79231898_79235528_2	chr8	-	1648	2	NNC	ENSMUSG00000037070.11	novel	1695	2	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCTTGATTTCTCC	NA	False	NA	NA	False	AGTAAA	-18	NA	79235528	79231897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_79233441_79235423
ENSMUSG00000037070.11_79232404_79235528_1	chr8	-	1144	2	FSM	ENSMUSG00000037070.11	ENSMUST00000211719.2	1622	2	-20	498	-1	-498	multi-exon	FALSE	canonical	3	608	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGATGGCTACGGTGGAA	NA	False	NA	NA	False	NA	NA	NA	79235528	79232403	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_79233447_79235427
ENSMUSG00000037071.4_44384262_44396151_1	chr19	-	3467	6	FSM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	-3	1368	-3	-1368	multi-exon	FALSE	canonical	3	439	junction_3	163.124001912655	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCCTGGTTTTTAGAAC	7437	False	NA	NA	False	NA	NA	NA	44396151	44384261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
ENSMUSG00000037071.4_44386204_44396151_2	chr19	-	1525	6	FSM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	-3	3310	-3	228	multi-exon	FALSE	canonical	3	439	junction_3	163.124001912655	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTTTGAGGTAATAAATAT	7437	False	NA	-5	True	TATAAA	-19	NA	44396151	44386203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
ENSMUSG00000037072.17_144276475_144303441_1	chr3	+	1226	5	FSM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	288	0	0	0	multi-exon	FALSE	canonical	3	1325	junction_1	27.3404462289846	2829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCTTTGTCCTTTCGTG	NA	False	NA	28	True	AATAAA	-30	NA	144276474	144303441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144302583
ENSMUSG00000037075.8_58771780_58805587_1	chr15	+	1969	12	NIC	ENSMUSG00000037075.8	novel	4348	2	NA	NA	-206	26681	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	749	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCAGAGCACGCTCGTCC	NA	False	NA	NA	False	NA	NA	NA	58771779	58805587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800532_58800599_58805527
ENSMUSG00000037075.8_58772823_58805587_1	chr15	+	926	12	NIC	ENSMUSG00000037075.8	novel	4348	2	NA	NA	837	26681	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	652	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCAGAGCACGCTCGTCC	NA	False	NA	NA	False	NA	NA	NA	58772822	58805587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800532_58800599_58805527
ENSMUSG00000037075.8_58772823_58805587_2	chr15	+	776	10	NIC	ENSMUSG00000037075.8	novel	4348	2	NA	NA	837	26681	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCAGAGCACGCTCGTCC	NA	False	NA	NA	False	NA	NA	NA	58772822	58805587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58792988_58793032_58793122_58793267_58798284_58798335_58800532_58800599_58805527
ENSMUSG00000037089.12_45874890_45878774_1	chr17	+	1994	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	90	-178	0	177	multi-exon	FALSE	canonical	3	396	junction_3	17.6823829464998	1632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAACACCCAACCCTGC	NA	False	NA	NA	False	NA	NA	NA	45874889	45878774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
ENSMUSG00000037101.17_79117611_79120955_1	chr8	+	1225	3	FSM	ENSMUSG00000037101.17	ENSMUST00000124713.2	673	3	0	-552	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTTATTTTCATTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	79117610	79120955	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_79118107_79119699_79119767_79120293
ENSMUSG00000037108.14_137786060_137820883_1	chr5	+	2138	16	NIC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_11	25.4046364972136	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCTTTGTGTGTGTGT	7077	False	NA	32	True	AATAAA	-25	NA	137786059	137820883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
ENSMUSG00000037111.10_51428145_51468074_1	chr3	-	1780	8	FSM	ENSMUSG00000037111.10	ENSMUST00000037141.9	7411	8	226	5405	226	-5405	multi-exon	FALSE	canonical	3	18	junction_2	3.23879544250132	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCGAAGCCCAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	51468074	51428144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_51428909_51434265_51434424_51437491_51437610_51440395_51440478_51443886_51444077_51450052_51450255_51457655_51457786_51467938
ENSMUSG00000037149.11_13269308_13299174_1	chr12	-	2468	26	FSM	ENSMUSG00000037149.11	ENSMUST00000071103.10	4842	26	40	2334	-10	-2334	multi-exon	FALSE	canonical	3	1685	junction_15	174.121171601847	2998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGCTTGTGTC	NA	False	NA	-11	True	AATAAA	-14	NA	13299174	13269307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ENSMUSG00000037149.11_13269308_13299174_2	chr12	-	2463	26	NNC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-10	-2334	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	436.005185290267	2994	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGCTTGTGTC	NA	False	NA	-11	True	AATAAA	-14	NA	13299174	13269307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290639_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ENSMUSG00000037149.11_13269521_13299174_1	chr12	-	2255	26	FSM	ENSMUSG00000037149.11	ENSMUST00000071103.10	4842	26	40	2547	-10	-2547	multi-exon	FALSE	canonical	3	1685	junction_15	174.121171601847	2054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTTCCGAACCTTCT	NA	False	NA	NA	False	NA	NA	NA	13299174	13269520	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ENSMUSG00000037152.12_51312899_51316385_1	chr3	-	424	4	FSM	ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	24	801	0	0	multi-exon	FALSE	canonical	3	5471	junction_1	421.328322755017	15573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGACGGAGTCACTGG	NA	False	NA	-32	True	AATAAA	-18	NA	51316385	51312898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
ENSMUSG00000037166.6_28988733_28992816_1	chr7	+	544	4	FSM	ENSMUSG00000037166.6	ENSMUST00000048187.6	950	4	-4	410	0	-410	multi-exon	FALSE	canonical	3	93	junction_2	2.05480466765633	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCCGGATTTTCC	4003	False	NA	8	True	NA	NA	NA	28988732	28992816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28988961_28990934_28991016_28991475_28991509_28992614
ENSMUSG00000037171.7_61254067_61261117_1	chr10	+	1779	3	FSM	ENSMUSG00000037171.7	ENSMUST00000049339.7	2095	3	316	0	316	0	multi-exon	FALSE	canonical	3	289	junction_2	2.5	1232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCTCACAATGTGTT	NA	False	NA	20	True	ATTAAA	-17	NA	61254066	61261117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_61254275_61258760_61259477_61260262
ENSMUSG00000037171.7_61255190_61261117_1	chr10	+	1674	3	NNC	ENSMUSG00000037171.7	novel	2095	3	NA	NA	1439	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	139.5	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCTCACAATGTGTT	NA	False	NA	20	True	ATTAAA	-17	NA	61255189	61261117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_61255293_61258760_61259477_61260262
ENSMUSG00000037188.8_135269199_135275809_1	chr4	-	1037	3	ISM	ENSMUSG00000037188.8	ENSMUST00000105855.2	2789	16	25132	0	25132	0	3prime_fragment	FALSE	canonical	3	271	junction_1	2	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	NA	False	NA	-2	True	AATAAA	-20	NA	135275809	135269198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_135270085_135273553_135273619_135275723
ENSMUSG00000037190.13_107416774_107419064_1	chr9	-	1218	3	FSM	ENSMUSG00000037190.13	ENSMUST00000041459.9	1786	3	0	568	0	0	multi-exon	FALSE	canonical	3	104	junction_2	5	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCGGGAGGAGCAGCGC	NA	False	NA	-20	True	AATAAA	-19	NA	107419064	107416773	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107417585_107418201_107418240_107418695
ENSMUSG00000037190.13_107416774_107419332_1	chr9	-	1131	4	FSM	ENSMUSG00000037190.13	ENSMUST00000194967.2	658	4	-6	-467	-6	0	multi-exon	FALSE	canonical	3	15	junction_2	45.536310297998	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCGGGAGGAGCAGCGC	NA	False	NA	-20	True	AATAAA	-19	NA	107419332	107416773	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107417585_107418201_107418269_107418695_107418850_107419233
ENSMUSG00000037214.13_26648261_26652968_1	chr8	+	992	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	92	1211	0	165	multi-exon	FALSE	canonical	3	177	junction_1	13	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAATTTTTTTGTTTGTA	NA	False	NA	25	True	AATAAA	-20	NA	26648260	26652968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_26648550_26650802_26650999_26652461
ENSMUSG00000037216.6_37911455_37915309_1	chr1	+	1842	2	NNC	ENSMUSG00000037216.6	novel	812	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCCTTTTCCTTAAGG	NA	False	NA	15	True	ATTAAA	-15	NA	37911454	37915309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_37911932_37913944
ENSMUSG00000037216.6_37911455_37915309_2	chr1	+	1580	2	FSM	ENSMUSG00000037216.6	ENSMUST00000142670.2	812	2	0	-768	0	0	multi-exon	TRUE	canonical	1	2	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCCTTTTCCTTAAGG	NA	False	NA	15	True	ATTAAA	-15	NA	37911454	37915309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_37911670_37913944
ENSMUSG00000037217.16_20714817_20726758_1	chrX	-	2323	16	NIC	ENSMUSG00000037217.16	novel	3261	13	NA	NA	60399	11933	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	16.4632925018053	599	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTTGTTTCCTCTCAG	NA	False	NA	NA	False	NA	NA	NA	20726758	20714816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ENSMUSG00000037236.17_35686465_35724476_1	chr18	+	3917	18	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	0	3715	combination_of_known_splicesites	FALSE	canonical	3	42	junction_4	422.186760687322	930	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35686464	35724476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690423_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUSG00000037236.17_35686465_35724476_2	chr18	+	2824	17	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	0	3715	combination_of_known_splicesites	FALSE	canonical	3	44	junction_4	434.874982035067	475	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35686464	35724476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690423_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUSG00000037236.17_35695270_35723860_1	chr18	+	2082	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237061.2	1854	14	-2	-226	0	69	multi-exon	FALSE	canonical	3	171	junction_1	296.625019792437	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTACTTTTCATCT	NA	False	NA	10	True	AATAAA	-18	NA	35695269	35723860	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUSG00000037236.17_35695270_35724476_1	chr18	+	3758	15	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	315.986251638406	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35695269	35724476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_35695313_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUSG00000037236.17_35695270_35724476_2	chr18	+	2665	14	FSM	ENSMUSG00000037236.17	ENSMUST00000236507.2	1846	14	6	-825	0	4	multi-exon	FALSE	canonical	3	44	junction_1	325.222090707295	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35695269	35724476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35695313_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUSG00000037236.17_35695270_35724476_3	chr18	+	2698	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237061.2	1854	14	-2	-842	0	4	multi-exon	FALSE	canonical	3	171	junction_1	296.625019792437	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35695269	35724476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUSG00000037236.17_35695270_35724642_1	chr18	+	3957	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	59	2246	0	170	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	1629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTCTTGTTCTTGTTA	NA	False	NA	9	True	ACTAAA	-20	NA	35695269	35724642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUSG00000037242.9_134941410_135000125_1	chr4	-	3989	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	0	130	0	-130	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGCTTTGGAGTATCGT	NA	False	NA	NA	False	NA	NA	NA	135000125	134941409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ENSMUSG00000037242.9_134942752_135000125_1	chr4	-	2647	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	0	1472	0	-1472	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTGACTCATGGCAGC	NA	False	NA	-8	True	AATAAA	-17	NA	135000125	134942751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ENSMUSG00000037251.6_26471453_26484161_1	chr8	-	2792	5	FSM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	0	821	0	-821	multi-exon	FALSE	canonical	3	50	junction_4	28.3681159050086	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTGCTGGCATCC	NA	False	NA	NA	False	AATAAA	-15	NA	26484161	26471452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677_26479770_26484114
ENSMUSG00000037251.6_26471453_26484161_2	chr8	-	2970	6	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	0	-821	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	45.3431361950185	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTGCTGGCATCC	NA	False	NA	NA	False	AATAAA	-15	NA	26484161	26471452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479193_26479372_26479677_26479770_26484114
ENSMUSG00000037251.6_26472385_26484161_2	chr8	-	1860	5	FSM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	0	1753	0	-1753	multi-exon	FALSE	canonical	3	50	junction_4	28.3681159050086	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTGTGCCCCTTTCTTGT	NA	False	NA	NA	False	AAGAAA	-14	NA	26484161	26472384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677_26479770_26484114
ENSMUSG00000037257.9_63509942_63540487_1	chr9	+	728	6	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	0	-7123	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	153.651033188846	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTATGCGCCTCTGAC	9214	False	NA	NA	False	AATAAA	-28	NA	63509941	63540487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63540333
ENSMUSG00000037257.9_63509942_63547789_1	chr9	+	1213	10	FSM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	0	4081	0	179	multi-exon	FALSE	canonical	3	211	junction_6	53.7134601610168	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTACAGTCTTCGTTTTA	9214	False	NA	NA	False	NA	NA	NA	63509941	63547789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
ENSMUSG00000037257.9_63509942_63549176_1	chr9	+	2600	10	FSM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	0	2694	0	1566	multi-exon	FALSE	canonical	3	211	junction_6	53.7134601610168	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTAATGTGTTTTGTT	9214	False	NA	NA	False	ATTAAA	-19	NA	63509941	63549176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
ENSMUSG00000037262.8_10085404_10097512_1	chr2	+	1398	5	FSM	ENSMUSG00000037262.8	ENSMUST00000042512.8	1472	5	-31	105	0	-105	multi-exon	FALSE	canonical	3	38	junction_2	5.40832691319598	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTTATTTTATCTTTG	4794	False	NA	NA	False	AATAAA	-24	NA	10085403	10097512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_10085556_10090540_10090636_10094923_10094968_10095051_10095175_10096528
ENSMUSG00000037278.10_78432235_78441603_1	chr11	-	1783	3	FSM	ENSMUSG00000037278.10	ENSMUST00000103242.5	1375	3	0	-408	0	408	multi-exon	TRUE	canonical	3	1037	junction_2	9	4142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTGCTTCTACTTT	NA	False	NA	NA	False	AATAAA	-17	NA	78441603	78432234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_78433623_78434311_78434457_78441353
ENSMUSG00000037278.10_78433287_78441603_1	chr11	-	731	3	FSM	ENSMUSG00000037278.10	ENSMUST00000103242.5	1375	3	0	644	0	-644	multi-exon	FALSE	canonical	3	1037	junction_2	9	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTCAGCAGCATTTGAA	NA	False	NA	NA	False	NA	NA	NA	78441603	78433286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_78433623_78434311_78434457_78441353
ENSMUSG00000037286.16_100525669_100838992_1	chr9	+	4412	34	FSM	ENSMUSG00000037286.16	ENSMUST00000129269.8	6186	34	168	1606	0	105	multi-exon	FALSE	canonical	3	316	junction_9	35.0771941586826	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGTTGTACAATTTA	NA	False	NA	48	True	AGTAAA	-20	NA	100525668	100838992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ENSMUSG00000037286.16_100525669_100839459_1	chr9	+	4879	34	FSM	ENSMUSG00000037286.16	ENSMUST00000129269.8	6186	34	168	1139	0	0	multi-exon	FALSE	canonical	3	316	junction_9	35.0771941586826	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTCAAGTTATCAGTC	NA	False	NA	7	True	AATAAA	-22	NA	100525668	100839459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ENSMUSG00000037286.16_100525669_100840597_1	chr9	+	6017	34	FSM	ENSMUSG00000037286.16	ENSMUST00000129269.8	6186	34	168	1	0	0	multi-exon	FALSE	canonical	3	316	junction_9	35.0771941586826	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	14	True	AATAAA	-14	NA	100525668	100840597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ENSMUSG00000037295.8_134472733_134495335_1	chr4	-	2681	9	FSM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	0	3868	0	1154	multi-exon	TRUE	canonical	3	50	junction_1	8.8175960442742	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGCATCACTTGGAGTA	NA	False	NA	-11	True	AATAAA	-16	NA	134495335	134472732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
ENSMUSG00000037296.8_26275316_26292565_1	chr8	+	1332	5	NNC	ENSMUSG00000037296.8	novel	2663	4	NA	NA	0	413	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	192.3856803403	1372	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTCTGGTGGAGAGT	8440	False	NA	24	True	AATAAA	-27	NA	26275315	26292565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_26275746_26282184_26282254_26283704_26283821_26286980_26287088_26291955
ENSMUSG00000037296.8_26275316_26292565_2	chr8	+	1092	4	NNC	ENSMUSG00000037296.8	novel	2663	4	NA	NA	0	413	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	193.046338708842	500	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTCTGGTGGAGAGT	8440	False	NA	24	True	AATAAA	-27	NA	26275315	26292565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_26275613_26282184_26282254_26283704_26283821_26291955
ENSMUSG00000037296.8_26275600_26292565_1	chr8	+	1048	5	NNC	ENSMUSG00000037296.8	novel	2663	4	NA	NA	0	413	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	192.3856803403	1026	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTCTGGTGGAGAGT	8724	False	NA	24	True	AATAAA	-27	NA	26275599	26292565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_26275746_26282184_26282254_26283704_26283821_26286980_26287088_26291955
ENSMUSG00000037313.17_33815930_33829545_2	chr5	+	2313	15	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	256.734636286941	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGTCCTGTTGTTTA	NA	False	NA	35	True	ACTAAA	-23	NA	33815929	33829545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821272_33821512_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ENSMUSG00000037313.17_33815930_33829545_3	chr5	+	2211	15	FSM	ENSMUSG00000037313.17	ENSMUST00000074849.13	2669	15	458	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	250.331341649912	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGTCCTGTTGTTTA	NA	False	NA	35	True	ACTAAA	-23	NA	33815929	33829545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824386_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ENSMUSG00000037313.17_33815930_33829545_4	chr5	+	2386	14	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	0	-3	0	0	intron_retention	FALSE	canonical	3	792	junction_7	85.2006333837612	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGTCCTGTTGTTTA	NA	False	NA	35	True	ACTAAA	-23	NA	33815929	33829545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
ENSMUSG00000037331.16_57933384_57948163_1	chr11	+	2052	13	ISM	ENSMUSG00000037331.16	ENSMUST00000071487.13	6614	19	33494	4694	945	-4694	internal_fragment	FALSE	canonical	3	629	junction_8	57.1393885355997	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCAAGAATACCTCGGCAA	NA	False	NA	NA	False	NA	NA	NA	57933383	57948163	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ENSMUSG00000037331.16_57947876_57948443_1	chr11	+	471	2	ISM	ENSMUSG00000037331.16	ENSMUST00000071487.13	6614	19	47986	4414	15437	-4414	internal_fragment	FALSE	canonical	3	678	junction_1	0	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAATTAATTTTCAGT	NA	False	NA	NA	False	GATAAA	-28	NA	57947875	57948443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_57947990_57948086
ENSMUSG00000037337.12_28700779_28702704_2	chr7	+	716	5	FSM	ENSMUSG00000037337.12	ENSMUST00000208784.2	523	5	-188	-5	-188	0	multi-exon	FALSE	canonical	3	158	junction_2	9.82344135219425	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGGAGGAGAGATTTTT	6774	False	NA	23	True	AATAAA	-28	NA	28700778	28702704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ENSMUSG00000037351.10_36738283_36749028_1	chr1	-	2099	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	61	1088	0	-1088	multi-exon	FALSE	canonical	3	484	junction_1	31.3043128019128	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCGGTGTGTGGCTCTGA	NA	False	NA	-19	True	TATAAA	-26	NA	36749028	36738282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ENSMUSG00000037351.10_36738426_36749028_1	chr1	-	1956	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	61	1231	0	-1231	multi-exon	FALSE	canonical	3	484	junction_1	31.3043128019128	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCATGTGCTTACCTCT	NA	False	NA	NA	False	NA	NA	NA	36749028	36738425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ENSMUSG00000037353.10_100366996_100377045_1	chr15	+	2303	9	FSM	ENSMUSG00000037353.10	ENSMUST00000229648.2	1222	9	8	-1089	0	0	multi-exon	FALSE	canonical	3	74	junction_1	16.3587705833904	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	2427	False	NA	27	True	AGTAAA	-16	NA	100366995	100377045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_100367020_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUSG00000037361.9_4867561_4877266_1	chr12	+	770	4	FSM	ENSMUSG00000037361.9	ENSMUST00000046207.9	1180	4	17	393	0	0	multi-exon	FALSE	canonical	3	1039	junction_3	63.8609600790829	6033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTGTTAAACTTCTCAC	NA	False	NA	35	True	AATAAA	-25	NA	4867560	4877266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_4867820_4870593_4870713_4876757_4876897_4877013
ENSMUSG00000037364.13_137293979_137305928_1	chr5	-	2991	20	NIC	ENSMUSG00000037364.13	novel	2972	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	165	junction_3	155.869662861488	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAACTGTGTGCTGTA	8265	False	NA	-14	True	AGTAAA	-16	NA	137305928	137293978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ENSMUSG00000037366.15_134123718_134154724_1	chr4	+	3082	11	FSM	ENSMUSG00000037366.15	ENSMUST00000105869.9	2248	11	87	-921	0	0	multi-exon	FALSE	canonical	3	35	junction_4	4.79687398208458	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGGCTGGCTTTCTTCT	1866	False	NA	20	True	ATTAAA	-22	NA	134123717	134154724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_134123736_134130280_134130416_134131403_134131555_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
ENSMUSG00000037373.13_33405067_33431934_1	chr5	-	2296	10	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	309.39646546059	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33431934	33405066	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_33406028_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33431891
ENSMUSG00000037376.15_132646127_132657933_1	chr2	-	2782	11	NNC	ENSMUSG00000037376.15	novel	2828	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	117.724636334117	717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTAATGATACAATGCT	NA	False	NA	-12	True	AATAAA	-23	NA	132657933	132646126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653972_132654096_132657723
ENSMUSG00000037405.9_20927281_20937633_1	chr9	+	719	4	ISM	ENSMUSG00000037405.9	ENSMUST00000086399.6	2535	7	0	2480	0	-2480	5prime_fragment	FALSE	canonical	3	355	junction_3	36.3073301445069	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCCCTGACCTCCTGGA	NA	False	NA	NA	False	NA	NA	NA	20927280	20937633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607
ENSMUSG00000037426.19_33021057_33075437_1	chr5	+	1710	21	NIC	ENSMUSG00000037426.19	novel	3569	33	NA	NA	0	105	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	29.9203526048742	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGCACCAGTATGAAGT	2005	False	NA	NA	False	NA	NA	NA	33021056	33075437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268
ENSMUSG00000037432.16_36458952_36484338_2	chr1	+	1090	8	NIC	ENSMUSG00000037432.16	novel	1723	12	NA	NA	2983	23147	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGCCCGCCCCGTGGCC	NA	False	NA	NA	False	NA	NA	NA	36458951	36484338	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_36459117_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ENSMUSG00000037461.11_191307874_191354858_1	chr1	+	4279	20	FSM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	126	942	0	0	multi-exon	FALSE	canonical	2	189	junction_14	33.0659544051011	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTGGTTTTTGTTTTTT	8319	False	NA	98	True	TTTAAA	-3	NA	191307873	191354858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_191307874_191354858_2	chr1	+	4237	21	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	65.9688562884032	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTGGTTTTTGTTTTTT	8319	False	NA	98	True	TTTAAA	-3	NA	191307873	191354858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353914_191353955
ENSMUSG00000037474.14_191269602_191307627_1	chr1	-	4058	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	29	125	-1	-125	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAAGATGGCTTGGGTT	NA	False	NA	-5	True	AATAAA	-25	NA	191307627	191269601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ENSMUSG00000037474.14_191270960_191307627_1	chr1	-	2700	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	29	1483	-1	257	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTGTGTGTGTGTG	NA	False	NA	0	True	AATATA	-17	NA	191307627	191270959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ENSMUSG00000037486.19_3476912_3547062_2	chr12	+	2234	11	NNC	ENSMUSG00000037486.19	novel	1483	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.8989539520038	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGCTTTCCTATATTTA	NA	False	NA	NA	False	AATAAA	-22	NA	3476911	3547062	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_3477213_3492473_3492561_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224
ENSMUSG00000037487.8_37968138_37988499_1	chr15	-	2339	15	ISM	ENSMUSG00000037487.8	ENSMUST00000226414.2	8397	59	90170	-399	3382	0	3prime_fragment	FALSE	canonical	3	678	junction_11	99.3772445517276	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAAATTAAGTATGTTC	NA	False	NA	-40	True	NA	NA	NA	37988499	37968137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447
ENSMUSG00000037490.6_22579778_22607260_1	chr10	+	2787	7	NIC	ENSMUSG00000037490.6	novel	4167	5	NA	NA	54871	27076	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	762	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCATAGAGGCGGCACGAG	NA	False	NA	NA	False	AATAAA	-17	NA	22579777	22607260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
ENSMUSG00000037492.17_24534494_24551302_1	chr8	+	1649	2	NNC	ENSMUSG00000037492.17	novel	4182	7	NA	NA	115425	-1819	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATAGTCTGAGGTTTTGGT	NA	False	NA	NA	False	AATAAA	-31	NA	24534493	24551302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_24534602_24549761
ENSMUSG00000037525.6_99367960_99372458_1	chr15	-	1123	2	FSM	ENSMUSG00000037525.6	ENSMUST00000040313.6	1276	2	153	0	131	0	multi-exon	FALSE	canonical	3	84	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTCGTTTCTTTGCT	NA	False	NA	0	True	ATTAAA	-19	NA	99372458	99367959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_99368961_99372336
ENSMUSG00000037531.9_32762914_32781122_1	chr3	-	1752	14	NIC	ENSMUSG00000037531.9	novel	3364	7	NA	NA	5640	16632	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	4632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAACTTCCAACGCCGCC	NA	False	NA	NA	False	NA	NA	NA	32781122	32762913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ENSMUSG00000037531.9_32781724_32790897_1	chr3	-	787	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	399	2178	399	0	multi-exon	FALSE	canonical	3	685	junction_5	35.1931180141168	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCATTGTTCTTAAAGCC	NA	False	NA	-89	True	NA	NA	NA	32790897	32781723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
ENSMUSG00000037531.9_32791225_32805380_1	chr3	-	652	6	NNC	ENSMUSG00000037531.9	novel	3364	7	NA	NA	-13626	-975	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	12364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGCCACGGAAGGAAGTG	NA	False	NA	NA	False	NA	NA	NA	32805380	32791224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802711_32805177
ENSMUSG00000037531.9_32791225_32805380_2	chr3	-	652	6	NNC	ENSMUSG00000037531.9	novel	3364	7	NA	NA	-13626	-975	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	12577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGCCACGGAAGGAAGTG	NA	False	NA	NA	False	NA	NA	NA	32805380	32791224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_32791355_32799002_32799092_32800596_32800664_32801882_32801939_32802609_32802717_32805177
ENSMUSG00000037544.15_47625236_47655634_1	chr14	-	2734	19	FSM	ENSMUSG00000037544.15	ENSMUST00000043296.10	2964	19	230	0	0	0	multi-exon	FALSE	canonical	3	355	junction_12	54.7968470301389	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTCTTCGCATTGTTA	NA	False	NA	NA	False	NA	NA	NA	47655634	47625235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ENSMUSG00000037544.15_47625236_47655667_1	chr14	-	2731	19	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_10	111.61232785134	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTCTTCGCATTGTTA	NA	False	NA	NA	False	NA	NA	NA	47655667	47625235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643323_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ENSMUSG00000037563.16_28050188_28052121_1	chr7	+	539	5	FSM	ENSMUSG00000037563.16	ENSMUST00000082134.6	1109	5	111	459	0	0	multi-exon	FALSE	canonical	3	19383	junction_3	806.134294023024	191902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050187	28052121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28050277_28050416_28050519_28051601_28051699_28051787_28051836_28051918
ENSMUSG00000037563.16_28050188_28052121_2	chr7	+	532	5	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8741.0029458867	135371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050187	28052121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_28050277_28050416_28050512_28051601_28051699_28051787_28051836_28051918
ENSMUSG00000037563.16_28050188_28052121_3	chr7	+	532	5	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8855.79201356378	147827	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050187	28052121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_28050277_28050423_28050519_28051601_28051699_28051787_28051836_28051918
ENSMUSG00000037570.17_99140698_99149801_1	chr15	-	1842	15	NNC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	228.257205890233	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTTTATTTTTTTTTA	NA	False	NA	1	True	AATAAA	-21	NA	99149801	99140697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146364_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
ENSMUSG00000037573.6_94100722_94106321_1	chr11	+	2160	2	NNC	ENSMUSG00000037573.6	novel	2288	2	NA	NA	-1558	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	238	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTATCCTGTGGTCTTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	94100721	94106321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_94100872_94104311
ENSMUSG00000037578.5_44136077_44145554_1	chr19	-	2485	12	ISM	ENSMUSG00000037578.5	ENSMUST00000042026.5	3321	15	35327	1	35327	0	3prime_fragment	FALSE	canonical	3	31	junction_9	12.7694107632134	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTTTGCATTTCCTTCT	886	False	NA	-2	True	AATAAA	-16	NA	44145554	44136076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142219_44142502_44142685_44142862_44143034_44143886_44144116_44144279_44144505_44145490
ENSMUSG00000037601.12_93849751_93859098_1	chr11	-	986	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	249	1946	0	547	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	16549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGGCCCAGGCCTGT	634	False	NA	-4	True	AATAAA	-14	NA	93859098	93849750	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
ENSMUSG00000037601.12_93850058_93859098_1	chr11	-	676	5	NNC	ENSMUSG00000037601.12	novel	3181	5	NA	NA	0	240	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1907.64658676601	14377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTATTGCTGTACAGCT	634	False	NA	-16	True	ATTAAA	-15	NA	93859098	93850057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_93850340_93851493_93851607_93854052_93854148_93856629_93856764_93859046
ENSMUSG00000037601.12_93850058_93859098_2	chr11	-	679	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	249	2253	0	240	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	14815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTATTGCTGTACAGCT	634	False	NA	-16	True	ATTAAA	-15	NA	93859098	93850057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
ENSMUSG00000037608.17_20188215_20216010_1	chr10	+	3217	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	-15	2235	0	1	multi-exon	FALSE	canonical	3	695	junction_11	110.864375352149	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATTTGTAACTATCAAC	2790	False	NA	10	True	AATAAA	-18	NA	20188214	20216010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ENSMUSG00000037617.13_36210608_36235323_1	chr15	+	1955	9	FSM	ENSMUSG00000037617.13	ENSMUST00000227582.2	2388	9	0	433	0	0	multi-exon	FALSE	canonical	3	39	junction_4	7	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTGGTGGCAGTTCT	72	False	NA	NA	False	ATTAAA	-14	NA	36210607	36235323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
ENSMUSG00000037622.15_133019770_133080201_1	chr4	-	3967	16	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	428	junction_6	32.7350305059003	622	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCATTTGTTGGGGC	8978	False	NA	1	True	ATTAAA	-22	NA	133080201	133019769	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
ENSMUSG00000037628.11_46998043_47008978_1	chr14	+	724	8	FSM	ENSMUSG00000037628.11	ENSMUST00000067426.6	917	8	45	148	0	1	multi-exon	FALSE	canonical	3	28	junction_6	72.4563204099335	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTTCTCCAGCATAGT	NA	False	NA	3	True	AATAAA	-18	NA	46998042	47008978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007292_47007394_47008857
ENSMUSG00000037628.11_46998043_47008978_2	chr14	+	746	8	NNC	ENSMUSG00000037628.11	novel	917	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	73.7455636853181	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTTCTCCAGCATAGT	NA	False	NA	3	True	AATAAA	-18	NA	46998042	47008978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_46998106_46999984_47000087_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
ENSMUSG00000037640.16_27430836_27451111_2	chr7	+	3858	5	FSM	ENSMUSG00000037640.16	ENSMUST00000108336.8	5896	5	22	2016	0	1225	multi-exon	FALSE	canonical	3	74	junction_1	38.9422649572415	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTGTCTGGCTCCATT	NA	False	NA	34	True	NA	NA	NA	27430835	27451111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592
ENSMUSG00000037661.15_30909893_30951339_1	chr3	+	1821	4	NNC	ENSMUSG00000037661.15	novel	2523	2	NA	NA	-206	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	107.116758726168	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30909892	30951339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_30910035_30931383_30931482_30944090_30944191_30949858
ENSMUSG00000037661.15_30910099_30951339_1	chr3	+	1787	4	FSM	ENSMUSG00000037661.15	ENSMUST00000194979.6	346	4	-43	-1398	0	0	multi-exon	FALSE	canonical	3	233	junction_2	25.3026129524645	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910098	30951339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_30910207_30931383_30931482_30944090_30944191_30949858
ENSMUSG00000037661.15_30910099_30951339_2	chr3	+	1899	5	NIC	ENSMUSG00000037661.15	novel	2213	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	111.904814463007	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910098	30951339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_30910207_30931383_30931482_30944090_30944191_30948277_30948390_30949858
ENSMUSG00000037669.16_8258145_8326216_1	chr12	+	1177	6	NIC	ENSMUSG00000037669.16	novel	1159	6	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	188	junction_5	22.8700677742765	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTAACATTGTGTGCGAC	NA	False	NA	NA	False	AATAAA	-40	NA	8258144	8326216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_8258205_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807
ENSMUSG00000037706.18_142606531_142621206_1	chr7	+	1013	8	FSM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	55	465	0	-136	multi-exon	FALSE	canonical	3	5787	junction_4	310.433666383802	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTAGTCTTTTTACTTTT	NA	False	NA	NA	False	NA	NA	NA	142606530	142621206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ENSMUSG00000037706.18_142606531_142621342_1	chr7	+	1149	8	FSM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	55	329	0	0	multi-exon	FALSE	canonical	3	5787	junction_4	310.433666383802	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGAGCTGGCCCTGGCTT	NA	False	NA	NA	False	NA	NA	NA	142606530	142621342	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ENSMUSG00000037710.9_71166552_71180784_1	chr10	-	842	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	0	242	0	-242	multi-exon	FALSE	canonical	3	1606	junction_1	82	6303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATGTACATTGTACTT	1253	False	NA	-28	True	ATTAAA	-15	NA	71180784	71166551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_71166957_71172043_71172250_71180553
ENSMUSG00000037712.18_45697209_45767575_1	chr14	-	2336	15	FSM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	0	957	0	-957	multi-exon	FALSE	canonical	3	310	junction_11	31.8875575504085	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATCATGATACCTT	NA	False	NA	0	True	AATAAA	-17	NA	45767575	45697208	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881_45767049_45767390
ENSMUSG00000037722.9_45614908_45626280_1	chr14	-	1533	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	138	1117	-30	703	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	2739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTGTGTTTTT	NA	False	NA	-1	True	ATTAAA	-30	NA	45626280	45614907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ENSMUSG00000037722.9_45614908_45626448_1	chr14	-	1517	6	NNC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-30	703	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	472.912930675405	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTGTGTTTTT	NA	False	NA	-1	True	ATTAAA	-30	NA	45626448	45614907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626388
ENSMUSG00000037722.9_45615480_45626280_1	chr14	-	961	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	138	1689	-30	131	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAATAAGGGTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	45626280	45615479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ENSMUSG00000037722.9_45615621_45626280_1	chr14	-	820	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	138	1830	-30	0	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAATATATTTTCAACT	NA	False	NA	NA	False	AATAAA	-18	NA	45626280	45615620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ENSMUSG00000037722.9_45615621_45626448_1	chr14	-	804	6	NNC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	472.912930675405	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAATATATTTTCAACT	NA	False	NA	NA	False	AATAAA	-18	NA	45626448	45615620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626388
ENSMUSG00000037725.9_22658461_22675524_1	chr8	-	2291	9	NNC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	311	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_8	79.0283770236995	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCATTGATTGACTTATT	NA	False	NA	-1	True	AATAAA	-26	NA	22675524	22658460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675405
ENSMUSG00000037730.14_30656786_30671803_1	chr3	+	2764	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	572	2219	0	-714	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTCTAGATATAAAATACA	8785	False	NA	NA	False	AATAAA	-15	NA	30656785	30671803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ENSMUSG00000037730.14_30656786_30672060_1	chr3	+	3021	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	572	1962	0	-457	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATAGTGTCCTTTCCG	8785	False	NA	NA	False	ATTAAA	-27	NA	30656785	30672060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ENSMUSG00000037740.9_130405662_130407314_1	chr2	+	977	4	FSM	ENSMUSG00000037740.9	ENSMUST00000145614.2	4278	4	0	3301	0	0	multi-exon	FALSE	canonical	3	506	junction_2	32.273139846559	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCCCATTTACTGGCT	385	False	NA	14	True	NA	NA	NA	130405661	130407314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_130405911_130406000_130406148_130406227_130406352_130406857
ENSMUSG00000037742.15_78385731_78387970_1	chr9	-	1708	7	ISM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	1036	0	0	0	3prime_fragment	FALSE	canonical	3	11573	junction_3	1591.79487267256	267016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGTCAATGCTGAAAGT	8136	False	NA	NA	False	ATTAAA	-22	NA	78387970	78385730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792
ENSMUSG00000037742.15_78385731_78389006_1	chr9	-	1786	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4936.65241446311	269063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGTCAATGCTGAAAGT	7100	False	NA	NA	False	ATTAAA	-22	NA	78389006	78385730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387141_78387431_78387522_78387703_78387792_78387971_78388920
ENSMUSG00000037742.15_78385810_78387970_1	chr9	-	1629	7	ISM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	1036	79	0	-79	3prime_fragment	FALSE	canonical	3	11573	junction_3	1591.79487267256	240045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTTAATGGAAACAACT	8136	False	NA	23	True	NA	NA	NA	78387970	78385809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792
ENSMUSG00000037752.5_132454611_132459839_1	chr4	-	1824	3	FSM	ENSMUSG00000037752.5	ENSMUST00000045550.5	4245	3	18	2403	0	1206	multi-exon	FALSE	canonical	3	48	junction_1	6.5	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTATGTACCACTAAGTG	4062	False	NA	-9	True	ATTAAA	-21	NA	132459839	132454610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132455882_132458186_132458384_132459483
ENSMUSG00000037772.14_142086898_142094484_1	chr7	+	420	4	NIC	ENSMUSG00000037772.14	novel	692	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	664.614675332005	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGACACTTTGCCTT	NA	False	NA	2	True	AATAAA	-20	NA	142086897	142094484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_142086932_142089806_142089890_142091003_142091078_142094255
ENSMUSG00000037772.14_142086898_142094484_2	chr7	+	543	5	FSM	ENSMUSG00000037772.14	ENSMUST00000038675.7	692	5	149	0	0	0	multi-exon	FALSE	canonical	3	973	junction_1	229.96847610053	6638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGACACTTTGCCTT	NA	False	NA	2	True	AATAAA	-20	NA	142086897	142094484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_142086932_142088741_142088865_142089806_142089890_142091003_142091078_142094255
ENSMUSG00000037772.14_142086898_142094484_3	chr7	+	562	5	NNC	ENSMUSG00000037772.14	novel	692	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	624.235732716415	4919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGACACTTTGCCTT	NA	False	NA	2	True	AATAAA	-20	NA	142086897	142094484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_142086932_142088741_142088865_142089806_142089890_142091003_142091078_142094236
ENSMUSG00000037773.15_130266285_130285654_1	chr2	-	2626	24	NIC	ENSMUSG00000037773.15	novel	3349	4	NA	NA	-19033	-2475	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAAACCCGCCTAGCGC	NA	False	NA	NA	False	NA	NA	NA	130285654	130266284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ENSMUSG00000037787.15_111679714_111700659_1	chr12	+	1030	6	NNC	ENSMUSG00000037787.15	novel	671	6	NA	NA	0	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	203.498009818278	3085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTTGAGAATAAGCCTT	1560	False	NA	NA	False	TTTAAA	-6	NA	111679713	111700659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111700100_111700622_111700642
ENSMUSG00000037787.15_111679720_111700437_1	chr12	+	823	5	FSM	ENSMUSG00000037787.15	ENSMUST00000040519.12	1065	5	25	217	0	-217	multi-exon	FALSE	canonical	3	492	junction_3	10.0343161201947	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTGGTGAGATGGCT	1566	False	NA	9	True	NA	NA	NA	111679719	111700437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111700100
ENSMUSG00000037787.15_111679720_111700437_2	chr12	+	820	5	NNC	ENSMUSG00000037787.15	novel	1065	5	NA	NA	0	-217	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	218.669270817827	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTGGTGAGATGGCT	1566	False	NA	9	True	NA	NA	NA	111679719	111700437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_111679853_111689045_111689248_111690780_111690838_111696455_111696547_111700100
ENSMUSG00000037787.15_111679720_111700654_1	chr12	+	1037	5	NNC	ENSMUSG00000037787.15	novel	1065	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	218.669270817827	2876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGCAAGTTGAGAATAA	1566	False	NA	NA	False	TTTAAA	-1	NA	111679719	111700654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_111679853_111689045_111689248_111690780_111690838_111696455_111696547_111700100
ENSMUSG00000037805.16_28547558_28549632_1	chr17	+	474	5	ISM	ENSMUSG00000037805.16	ENSMUST00000042334.16	830	6	113	375	0	0	5prime_fragment	FALSE	canonical	3	5482	junction_4	1520.65684820738	2008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAGGTGAAATCGACAAT	NA	False	NA	NA	False	AATGAA	-19	NA	28547557	28549632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549498
ENSMUSG00000037805.16_28547558_28550006_1	chr17	+	711	6	NNC	ENSMUSG00000037805.16	novel	949	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3325.42969253599	137445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547557	28550006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549503_28549672_28549803
ENSMUSG00000037822.13_65607146_65650226_1	chr5	-	1084	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	517	2959	-2	0	multi-exon	FALSE	canonical	3	378	junction_4	15.1410039297267	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGGTTTAGAATCCATT	NA	False	NA	NA	False	AATAAA	-19	NA	65650226	65607145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
ENSMUSG00000037822.13_65607146_65650285_1	chr5	-	938	5	FSM	ENSMUSG00000037822.13	ENSMUST00000121661.8	1056	5	118	0	-61	0	multi-exon	FALSE	canonical	2	20	junction_4	163.329421721869	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGGTTTAGAATCCATT	NA	False	NA	NA	False	AATAAA	-19	NA	65650285	65607145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650283
ENSMUSG00000037822.13_65607537_65650176_1	chr5	-	643	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	567	3350	38	-267	multi-exon	FALSE	canonical	3	378	junction_4	15.1410039297267	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGGGCTTTGTTGGTTG	NA	False	NA	-4	True	AGTAAA	-16	NA	65650176	65607536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
ENSMUSG00000037824.7_40628404_40688793_1	chr14	-	2497	9	NNC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	214.69276740263	1707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTTGGTGATAAATTGA	NA	False	NA	47	True	ATTAAA	-16	NA	40688793	40628403	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640591_40640638_40656144_40656243_40688732
ENSMUSG00000037845.15_50679551_50683618_1	chr9	+	1613	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	15	1030	0	-325	multi-exon	FALSE	canonical	3	72	junction_2	7.15454401062709	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTATCCGCCCTGCT	NA	False	NA	NA	False	AATAGA	-16	NA	50679550	50683618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
ENSMUSG00000037845.15_50679551_50683969_1	chr9	+	1964	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	15	679	0	0	multi-exon	FALSE	canonical	3	72	junction_2	7.15454401062709	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTCTGGACTCTTGTG	NA	False	NA	2	True	AAAAAG	-17	NA	50679550	50683969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
ENSMUSG00000037846.19_67815545_67878346_1	chr10	+	2473	12	FSM	ENSMUSG00000037846.19	ENSMUST00000118160.8	3970	12	145	1352	0	218	multi-exon	FALSE	canonical	3	32	junction_2	17.4900207674628	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATCTGCTATTCAAA	NA	False	NA	26	True	ATTAAA	-23	NA	67815544	67878346	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_67815643_67823136_67823343_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
ENSMUSG00000037846.19_67845128_67878341_1	chr10	+	1833	7	NNC	ENSMUSG00000037846.19	novel	3970	12	NA	NA	29583	213	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.3658343356984	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAATTTGTAATCTGCTAT	NA	False	NA	21	True	ATTAAA	-18	NA	67845127	67878341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_67845223_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
ENSMUSG00000037846.19_67877080_67879988_1	chr10	+	628	3	NNC	ENSMUSG00000037846.19	novel	546	2	NA	NA	-2718	290	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTCTGCCCAACCCCCA	NA	False	NA	NA	False	NA	NA	NA	67877079	67879988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_67877395_67877524_67877608_67879758
ENSMUSG00000037847.15_18609314_18629295_1	chr19	+	1443	9	FSM	ENSMUSG00000037847.15	ENSMUST00000237347.2	1940	9	0	497	0	4	multi-exon	FALSE	canonical	3	68	junction_8	10.6880482315528	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTCTCTGTGAGA	NA	False	NA	NA	False	CATAAA	-20	NA	18609313	18629295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18628599
ENSMUSG00000037851.14_49835667_49887743_1	chr13	+	4444	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	43	junction_17	414.518858795979	1973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAAGTAGTTATTCTC	NA	False	NA	30	True	ATTAAA	-31	NA	49835666	49887743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_49835785_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865317_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ENSMUSG00000037857.17_77576981_77601738_1	chr11	+	3329	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	0	1829	0	-1829	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGTTCCTTTGGTTAT	NA	False	NA	22	True	AATATA	-18	NA	77576980	77601738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ENSMUSG00000037857.17_77576981_77602846_1	chr11	+	4437	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	0	721	0	-721	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTCCAGTTTGTTTTA	NA	False	NA	85	True	AATAAA	-44	NA	77576980	77602846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ENSMUSG00000037860.16_173248164_173293272_1	chr1	+	2061	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	0	-326	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	40.6051167983061	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGATATCATTCTTC	NA	False	NA	11	True	NA	NA	NA	173248163	173293272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173289472_173289887_173291424_173291614_173292536
ENSMUSG00000037860.16_173248164_173293272_2	chr1	+	2073	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	0	-326	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	29.5379382475888	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGATATCATTCTTC	NA	False	NA	11	True	NA	NA	NA	173248163	173293272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_173248253_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ENSMUSG00000037860.16_173248164_173293272_3	chr1	+	2213	9	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	69719	334	0	-326	3prime_fragment	FALSE	canonical	3	62	junction_1	21.7884000100971	613	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGATATCATTCTTC	NA	False	NA	11	True	NA	NA	NA	173248163	173293272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ENSMUSG00000037860.16_173248164_173293606_1	chr1	+	2547	9	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	69719	0	0	0	3prime_fragment	FALSE	canonical	3	62	junction_1	21.7884000100971	826	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGACTGTTCTATTTT	NA	False	NA	23	True	AATAAA	-41	NA	173248163	173293606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ENSMUSG00000037860.16_173248164_173293606_2	chr1	+	2407	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	29.5379382475888	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGACTGTTCTATTTT	NA	False	NA	23	True	AATAAA	-41	NA	173248163	173293606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_173248253_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ENSMUSG00000037894.14_137570352_137572585_1	chr3	+	868	5	NNC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6351.56427090996	78522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTAAACTTGCTTAATAA	NA	False	NA	3	True	AATAAA	-18	NA	137570351	137572585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_137570458_137570893_137570972_137571280_137571405_137571780_137571902_137572146
ENSMUSG00000037894.14_137570352_137572585_2	chr3	+	867	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	104	98	0	6	multi-exon	FALSE	canonical	3	13832	junction_1	739.113320134335	81567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTAAACTTGCTTAATAA	NA	False	NA	3	True	AATAAA	-18	NA	137570351	137572585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
ENSMUSG00000037905.14_125518632_125532159_1	chr5	+	952	3	NNC	ENSMUSG00000037905.14	novel	6473	3	NA	NA	0	369	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGCTTTGAAGGGAACG	NA	False	NA	29	True	AATAAA	-21	NA	125518631	125532159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_125518801_125518881_125518939_125531433
ENSMUSG00000037905.14_125518632_125532159_2	chr5	+	1198	3	FSM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	0	5275	0	369	multi-exon	FALSE	canonical	3	373	junction_1	23.5	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGCTTTGAAGGGAACG	NA	False	NA	29	True	AATAAA	-21	NA	125518631	125532159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_125518957_125528733_125528837_125531389
ENSMUSG00000037905.14_125518814_125532159_1	chr5	+	1016	3	FSM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	182	5275	0	369	multi-exon	FALSE	canonical	3	373	junction_1	23.5	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGCTTTGAAGGGAACG	NA	False	NA	29	True	AATAAA	-21	NA	125518813	125532159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_125518957_125528733_125528837_125531389
ENSMUSG00000037916.15_4057503_4062665_1	chr19	-	1508	10	NNC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	443.81953289347	2564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	6567	False	NA	-3	True	AATAAA	-24	NA	4062665	4057502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_4057666_4057775_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ENSMUSG00000037916.15_4057503_4062665_2	chr19	-	1618	9	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1250	junction_5	96.4737658640938	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	6567	False	NA	-3	True	AATAAA	-24	NA	4062665	4057502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ENSMUSG00000037916.15_4057503_4062665_3	chr19	-	1502	10	NNC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	454.671065472367	2131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	6567	False	NA	-3	True	AATAAA	-24	NA	4062665	4057502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061417_4062550
ENSMUSG00000037916.15_4057503_4062665_4	chr19	-	2898	8	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1340	junction_2	88.8546164087317	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	6567	False	NA	-3	True	AATAAA	-24	NA	4062665	4057502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4061273_4061345_4061429_4062550
ENSMUSG00000037916.15_4057503_4062724_1	chr19	-	1566	10	NNC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	456.105738227929	3504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	6508	False	NA	-3	True	AATAAA	-24	NA	4062724	4057502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060003_4061101_4061273_4061345_4061429_4062550
ENSMUSG00000037916.15_4057503_4062724_2	chr19	-	1593	10	NNC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	442.89677754027	3685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	6508	False	NA	-3	True	AATAAA	-24	NA	4062724	4057502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_4057686_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ENSMUSG00000037935.17_99100818_99121277_1	chr11	-	1303	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	198.840962568234	951	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTCTGTGTATTAA	NA	False	NA	-1	True	AATGAA	-36	NA	99121277	99100817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99119100_99119145_99119322_99119375_99121227
ENSMUSG00000037936.16_125354851_125418083_1	chr5	-	1617	12	FSM	ENSMUSG00000037936.16	ENSMUST00000111390.8	2367	12	52	698	0	0	multi-exon	FALSE	canonical	3	487	junction_1	58.8981471316135	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTCTCTCAGCGGACAG	NA	False	NA	NA	False	NA	NA	NA	125418083	125354850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ENSMUSG00000037938.5_128971724_128975400_1	chr2	+	567	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	104	654	0	0	multi-exon	FALSE	canonical	3	556	junction_1	75.455652906562	1820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGGAGAAGAGCGATGAGA	3929	False	NA	40	True	AATAAA	-44	NA	128971723	128975400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
ENSMUSG00000037938.5_128971724_128976054_1	chr2	+	1215	4	NNC	ENSMUSG00000037938.5	novel	1325	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	300.274319026231	2199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTAGGTTTGTGTGTT	3929	False	NA	45	True	NA	NA	NA	128971723	128976054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_128971778_128972097_128972239_128972320_128972487_128975200
ENSMUSG00000037938.5_128971724_128976054_2	chr2	+	1221	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	104	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	75.455652906562	2962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTAGGTTTGTGTGTT	3929	False	NA	45	True	NA	NA	NA	128971723	128976054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
ENSMUSG00000037965.16_10955201_10994205_1	chr16	-	3028	23	FSM	ENSMUSG00000037965.16	ENSMUST00000037633.16	3825	23	52	745	0	-211	multi-exon	FALSE	canonical	3	82	junction_12	24.8770530528646	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGGAAAATATAGTTTT	NA	False	NA	NA	False	AAGAAA	-38	NA	10994205	10955200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ENSMUSG00000037966.16_49341001_49349720_1	chr13	+	1124	4	NNC	ENSMUSG00000037966.16	novel	1321	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	176.942551882431	735	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGGTTCCATGTGCCA	NA	False	NA	13	True	AATAAA	-15	NA	49341000	49349720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_49341114_49347234_49347441_49348369_49348534_49349079
ENSMUSG00000037971.11_50675030_50679460_1	chr9	-	821	3	NIC	ENSMUSG00000037971.11	novel	2082	4	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	2	3	junction_1	11	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAAAAAAAAATCTCTATT	NA	False	NA	NA	False	AATAAA	-10	NA	50679460	50675029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_50675317_50675995_50676227_50679157
ENSMUSG00000037982.17_81738803_81741542_1	chr8	+	1288	2	NIC	ENSMUSG00000037982.17	novel	2328	2	NA	NA	-1402	-23671	intron_retention	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGCAGAAATACTGGCGA	6956	False	NA	NA	False	NA	NA	NA	81738802	81741542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_81738932_81740383
ENSMUSG00000038000.11_106424790_106427717_1	chr8	-	1366	10	NIC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_8	60.9681155286196	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGAGAGATTCAGGG	NA	False	NA	-13	True	AATAAA	-16	NA	106427717	106424789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106427035_106427334_106427472_106427551
ENSMUSG00000038000.11_106424790_106427717_2	chr8	-	1407	11	NNC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	62.5367891724543	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGAGAGATTCAGGG	NA	False	NA	-13	True	AATAAA	-16	NA	106427717	106424789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427463_106427551
ENSMUSG00000038000.11_106424790_106427717_3	chr8	-	1416	11	FSM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	-1	1739	0	0	multi-exon	FALSE	canonical	3	179	junction_7	13.7637204272682	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGAGAGATTCAGGG	NA	False	NA	-13	True	AATAAA	-16	NA	106427717	106424789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427472_106427551
ENSMUSG00000038005.16_61343452_61360609_1	chr8	+	1249	8	NNC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	292.44095863219	2240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCTCTTCTAGTGTTTC	NA	False	NA	17	True	AATAAA	-30	NA	61343451	61360609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357152_61358581_61358755_61360370
ENSMUSG00000038005.16_61343485_61360609_1	chr8	+	586	4	NIC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	388.477655585091	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCTCTTCTAGTGTTTC	NA	False	NA	17	True	AATAAA	-30	NA	61343484	61360609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_61343571_61357033_61357122_61358581_61358755_61360370
ENSMUSG00000038005.16_61343485_61360609_2	chr8	+	737	5	NIC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	382.667610335654	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCTCTTCTAGTGTTTC	NA	False	NA	17	True	AATAAA	-30	NA	61343484	61360609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_61343571_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ENSMUSG00000038005.16_61343485_61360609_3	chr8	+	1253	9	NNC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	365.929211050443	2172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCTCTTCTAGTGTTTC	NA	False	NA	17	True	AATAAA	-30	NA	61343484	61360609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61359405_61359473_61360370
ENSMUSG00000038007.15_86848928_86850728_1	chr4	+	612	2	FSM	ENSMUSG00000038007.15	ENSMUST00000135874.2	2943	2	0	2331	0	0	multi-exon	FALSE	canonical	3	467	junction_1	0	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGAAAATAAAGGCTCCC	4120	False	NA	NA	False	NA	NA	NA	86848927	86850728	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_86849080_86850268
ENSMUSG00000038007.15_86848928_86850857_1	chr4	+	741	2	FSM	ENSMUSG00000038007.15	ENSMUST00000135874.2	2943	2	0	2202	0	129	multi-exon	FALSE	canonical	3	467	junction_1	0	3534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGGTGTGGTTCAAGA	4120	False	NA	22	True	NA	NA	NA	86848927	86850857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_86849080_86850268
ENSMUSG00000038009.8_98997154_99002618_1	chr15	+	1416	3	NIC	ENSMUSG00000038009.8	novel	381	3	NA	NA	-139	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	26	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACGGAATCCTAGCCCA	3884	False	NA	3	True	AATAAA	-21	NA	98997153	99002618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_98997195_98998703_98999657_99002196
ENSMUSG00000038009.8_98997293_99002618_1	chr15	+	1448	3	NNC	ENSMUSG00000038009.8	novel	1564	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	18.5	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACGGAATCCTAGCCCA	4023	False	NA	3	True	AATAAA	-21	NA	98997292	99002618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_98997366_98998703_98999657_99002196
ENSMUSG00000038010.10_58333770_58336634_1	chr10	+	834	4	NIC	ENSMUSG00000038010.10	novel	2455	16	NA	NA	0	-1560	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	29.5108266385218	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	943	False	NA	NA	False	NA	NA	NA	58333769	58336634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_58333885_58334990_58335036_58335183_58335242_58336018
ENSMUSG00000038010.10_58333770_58377468_1	chr10	+	2122	12	ISM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	0	34598	0	-34598	5prime_fragment	FALSE	canonical	3	46	junction_9	6.71497647731614	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGATCTTCACCTAT	943	False	NA	NA	False	NA	NA	NA	58333769	58377468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619
ENSMUSG00000038023.13_124767130_124799203_1	chr5	+	3016	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	13	2316	0	0	multi-exon	TRUE	canonical	3	142	junction_14	17.8821937464506	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACTTAAAAAAAAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	124767129	124799203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ENSMUSG00000038023.13_124767130_124799713_1	chr5	+	3526	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	13	1806	0	510	multi-exon	FALSE	canonical	3	142	junction_14	17.8821937464506	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTCAGGTTAGCTGAAA	NA	False	NA	30	True	AATAAA	-28	NA	124767129	124799713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ENSMUSG00000038028.10_127064100_127086513_1	chr6	-	1630	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	0	2021	0	744	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	2489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCGGGGGAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	127086513	127064099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ENSMUSG00000038028.10_127064433_127086513_1	chr6	-	1297	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	0	2354	0	411	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	2400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGTTCAGAGTGAAGC	NA	False	NA	-10	True	AAGAAA	-39	NA	127086513	127064432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ENSMUSG00000038028.10_127064647_127086513_1	chr6	-	1083	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	0	2568	0	197	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTATGTCTCTGATCT	NA	False	NA	-7	True	NA	NA	NA	127086513	127064646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ENSMUSG00000038034.16_172146327_172147404_1	chr1	+	593	3	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	6393	4	0	2	3prime_fragment	FALSE	canonical	3	745	junction_2	38	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGAGGCCTGTTGTGTCTTC	NA	False	NA	15	True	AATAAA	-15	NA	172146326	172147404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_172146535_172146859_172146991_172147150
ENSMUSG00000038045.15_79192326_79202529_1	chr17	-	813	5	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	81.8516187988973	918	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATTGGAACATTGCTG	NA	False	NA	-16	True	ATTAAA	-16	NA	79202529	79192325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971_79202099_79202415
ENSMUSG00000038045.15_79192326_79202529_2	chr17	-	1130	4	ISM	ENSMUSG00000038045.15	ENSMUST00000146474.8	764	5	0	0	0	0	intron_retention	FALSE	canonical	3	141	junction_3	32.273139846559	695	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATTGGAACATTGCTG	NA	False	NA	-16	True	ATTAAA	-16	NA	79202529	79192325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971
ENSMUSG00000038045.15_79192326_79202529_3	chr17	-	829	5	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	82.6661206299171	905	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATTGGAACATTGCTG	NA	False	NA	-16	True	ATTAAA	-16	NA	79202529	79192325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971_79202099_79202399
ENSMUSG00000038045.15_79192326_79202529_4	chr17	-	2965	4	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_3	86.5678924313166	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATTGGAACATTGCTG	NA	False	NA	-16	True	ATTAAA	-16	NA	79202529	79192325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_79192646_79196359_79196517_79198274_79198370_79200136
ENSMUSG00000038045.15_79192326_79202529_5	chr17	-	973	3	NIC	ENSMUSG00000038045.15	novel	764	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_1	60	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATTGGAACATTGCTG	NA	False	NA	-16	True	ATTAAA	-16	NA	79202529	79192325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_79192646_79198274_79198370_79201971
ENSMUSG00000038045.15_79192326_79202529_6	chr17	-	878	2	NIC	ENSMUSG00000038045.15	novel	764	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	29	junction_1	0	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATTGGAACATTGCTG	NA	False	NA	-16	True	ATTAAA	-16	NA	79202529	79192325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_79192646_79201971
ENSMUSG00000038045.15_79192326_79212115_1	chr17	-	857	6	NNC	ENSMUSG00000038045.15	novel	2060	7	NA	NA	2213	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	85.9334626324344	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATTGGAACATTGCTG	NA	False	NA	-16	True	ATTAAA	-16	NA	79212115	79192325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971_79202099_79204986_79205077_79212047
ENSMUSG00000038045.15_79192326_79223461_1	chr17	-	1110	8	NNC	ENSMUSG00000038045.15	novel	2060	7	NA	NA	-9040	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	86.9874492471794	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATTGGAACATTGCTG	NA	False	NA	-16	True	ATTAAA	-16	NA	79223461	79192325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971_79202099_79204986_79205077_79212937_79213051_79223053_79223159_79223358
ENSMUSG00000038059.8_60607263_60622851_1	chr18	-	1470	2	NNC	ENSMUSG00000038059.8	novel	1990	2	NA	NA	11797	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTTGTTTGTTTGTT	7252	False	NA	2	True	GATAAA	-15	NA	60622851	60607262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_60608658_60622776
ENSMUSG00000038065.14_54658739_54677005_1	chr6	+	1342	3	FSM	ENSMUSG00000038065.14	ENSMUST00000190641.7	5303	3	130	3831	0	-1121	multi-exon	TRUE	canonical	3	54	junction_2	0.5	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTATTCTTTAGAGAAT	NA	False	NA	NA	False	AATAAA	-23	NA	54658738	54677005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_54658917_54665990_54666114_54675964
ENSMUSG00000038069.7_48163261_48166967_1	chr8	-	2613	3	FSM	ENSMUSG00000038069.7	ENSMUST00000212175.2	3393	3	-1	781	0	-781	multi-exon	FALSE	canonical	3	65	junction_1	31	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTGTTTTTTTTTCT	NA	False	NA	-1	True	ATTAAA	-27	NA	48166967	48163260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_48165330_48165922_48166054_48166554
ENSMUSG00000038069.7_48163261_48166967_2	chr8	-	2582	3	FSM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	0	882	0	-781	multi-exon	FALSE	canonical	3	60	junction_1	33.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTGTTTTTTTTTCT	NA	False	NA	-1	True	ATTAAA	-27	NA	48166967	48163260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_48165330_48165953_48166054_48166554
ENSMUSG00000038072.15_25462477_25470916_1	chr5	+	1316	6	ISM	ENSMUSG00000038072.15	ENSMUST00000114950.2	2493	11	10116	0	10116	0	3prime_fragment	FALSE	canonical	3	184	junction_2	34.342975992188	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGACTCTTCTATCTCT	NA	False	NA	13	True	AATAAA	-27	NA	25462476	25470916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
ENSMUSG00000038079.15_59139749_59158965_1	chr1	-	1819	12	NIC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	59.5276170368229	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTATTAACTGAAGGTTT	4340	False	NA	-10	True	AATAAA	-24	NA	59158965	59139748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133_59157166_59158861
ENSMUSG00000038080.18_47196975_47238076_1	chr13	+	4308	21	FSM	ENSMUSG00000038080.18	ENSMUST00000037025.16	4987	21	0	679	0	4	multi-exon	FALSE	canonical	3	35	junction_2	9.84682690007294	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCAACCTCCTTTCCA	1161	False	NA	5	True	AATAAA	-15	NA	47196974	47238076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ENSMUSG00000038084.17_29398210_29470697_1	chr16	+	3332	31	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_4	92.8546295142155	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	9	True	AATAAA	-19	NA	29398209	29470697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ENSMUSG00000038084.17_29398210_29470697_2	chr16	+	3167	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	58	3005	0	0	multi-exon	FALSE	canonical	3	145	junction_5	76.2263931339013	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	9	True	AATAAA	-19	NA	29398209	29470697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ENSMUSG00000038084.17_29398210_29470697_3	chr16	+	3278	30	NIC	ENSMUSG00000038084.17	novel	4017	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	253	junction_5	68.2954691456644	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	9	True	AATAAA	-19	NA	29398209	29470697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ENSMUSG00000038095.16_124533986_124563656_1	chr5	-	2133	15	ISM	ENSMUSG00000038095.16	ENSMUST00000200474.5	2413	17	0	2973	0	0	5prime_fragment	TRUE	canonical	3	85	junction_13	108.449955542374	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAATAAAATAAAGAA	NA	False	NA	NA	False	NA	NA	NA	124563656	124533985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124563509
ENSMUSG00000038116.17_156038654_156145087_1	chr2	+	2790	16	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	92	6785	0	-1525	5prime_fragment	FALSE	canonical	3	289	junction_1	23.1714383575029	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCCAAAGGTAGGTGT	NA	False	NA	NA	False	NA	NA	NA	156038653	156145087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702
ENSMUSG00000038122.10_56099620_56104785_1	chr10	-	605	3	NNC	ENSMUSG00000038122.10	novel	7240	33	NA	NA	0	-69361	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	5	218658	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCTGGCAAAAAAAGAGAAC	NA	False	NA	NA	False	NA	NA	NA	56104785	56099619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_56099851_56100659_56100822_56104573
ENSMUSG00000038141.12_6320745_6356064_1	chr17	+	1885	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	0	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	216.5692369082	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTGAGTCTGTGGGAGG	NA	False	NA	NA	False	AATAAA	-35	NA	6320744	6356064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353587_6354523_6354611_6354851_6354919_6355643
ENSMUSG00000038141.12_6320745_6358589_1	chr17	+	1782	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	237.645407790157	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6320744	6358589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353587_6354523_6354611_6354851_6354919_6358271
ENSMUSG00000038150.8_98472082_98478071_1	chr11	-	2061	4	FSM	ENSMUSG00000038150.8	ENSMUST00000052919.8	2184	4	123	0	123	0	multi-exon	FALSE	canonical	3	195	junction_2	8.33999733546454	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGCTTCCTG	1446	False	NA	1	True	AATAAA	-23	NA	98478071	98472081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_98473674_98473961_98474114_98474767_98474967_98477953
ENSMUSG00000038151.14_44314289_44317228_1	chr10	-	2253	3	ISM	ENSMUSG00000038151.14	ENSMUST00000218369.2	2517	7	15978	-1374	15978	0	3prime_fragment	FALSE	canonical	3	47	junction_2	4	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTGGGTGGTTCGGTCC	NA	False	NA	-105	True	NA	NA	NA	44317228	44314288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_44316239_44316654_44316784_44317054
ENSMUSG00000038151.14_44315225_44317228_1	chr10	-	1317	3	ISM	ENSMUSG00000038151.14	ENSMUST00000218369.2	2517	7	15978	-438	15978	438	3prime_fragment	FALSE	canonical	3	47	junction_2	4	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTTGTAATTTGAGTA	NA	False	NA	NA	False	ATTAAA	-22	NA	44317228	44315224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_44316239_44316654_44316784_44317054
ENSMUSG00000038155.12_4090287_4092237_1	chr19	-	935	6	NIC	ENSMUSG00000038155.12	novel	797	7	NA	NA	-19	0	intron_retention	FALSE	canonical	3	1174	junction_5	1038.62948157656	30924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTTTGGTGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	4092237	4090286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_4090540_4090707_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092164
ENSMUSG00000038155.12_4090287_4096002_1	chr19	-	880	8	NIC	ENSMUSG00000038155.12	novel	797	7	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_6	1378.94109033426	29783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTTTGGTGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	4096002	4090286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092566_4092672_4095923
ENSMUSG00000038160.8_44144411_44239635_1	chr10	+	1643	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	57	652	0	-652	multi-exon	FALSE	canonical	3	249	junction_3	36.7828709025918	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATACAGTTTGTCACTT	NA	False	NA	15	True	AATAAA	-27	NA	44144410	44239635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ENSMUSG00000038160.8_44144411_44240292_1	chr10	+	2300	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	57	-5	0	5	multi-exon	FALSE	canonical	3	249	junction_3	36.7828709025918	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGGCTCAAGTGA	NA	False	NA	NA	False	AATAAA	-23	NA	44144410	44240292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ENSMUSG00000038167.7_125339623_125347698_1	chr6	-	1308	5	ISM	ENSMUSG00000038167.7	ENSMUST00000042647.7	3299	17	10058	0	10058	0	3prime_fragment	FALSE	canonical	2	4	junction_4	2.48746859276655	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACATGGTTGTTTGGTG	3713	False	NA	NA	False	TATAAA	-8	NA	125347698	125339622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_125339831_125340004_125340683_125341546_125341699_125347343_125347460_125347544
ENSMUSG00000038172.15_83143102_83242497_1	chr4	-	4271	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-5	4565	-5	1554	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGGCATGCATTCACA	NA	False	NA	NA	False	NA	NA	NA	83242497	83143101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ENSMUSG00000038172.15_83144656_83242497_1	chr4	-	2717	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-5	6119	-5	0	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTAGTGCTGAAGCCTG	NA	False	NA	NA	False	AATAAA	-23	NA	83242497	83144655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ENSMUSG00000038172.15_83145081_83242426_1	chr4	-	2221	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	66	6544	0	-425	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTTTTTAATGTAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	83242426	83145080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ENSMUSG00000038181.17_24797620_24803641_1	chr5	+	1343	12	NIC	ENSMUSG00000038181.17	novel	5371	5	NA	NA	-865	4087	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCCCGGGCGGGGGC	NA	False	NA	NA	False	NA	NA	NA	24797619	24803641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589
ENSMUSG00000038187.15_112914853_112968568_1	chr7	-	2518	10	NIC	ENSMUSG00000038187.15	novel	2581	11	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_8	62.9638344166272	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTCTGACCAACTTTA	NA	False	NA	-19	True	AATAAA	-14	NA	112968568	112914852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112950987_112951146_112968078_112968166_112968405
ENSMUSG00000038187.15_112914853_112968568_2	chr7	-	2425	10	NIC	ENSMUSG00000038187.15	novel	2581	11	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_7	47.410734836931	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTCTGACCAACTTTA	NA	False	NA	-19	True	AATAAA	-14	NA	112968568	112914852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112964111_112964177_112968078_112968166_112968405
ENSMUSG00000038215.16_56984557_57003878_1	chr8	-	1533	11	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	38.0914688611505	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATATGTGCCGATTTT	NA	False	NA	-5	True	AATAAA	-18	NA	57003878	56984556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003722
ENSMUSG00000038215.16_56984557_57003878_2	chr8	-	1735	12	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	55.4532041566551	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATATGTGCCGATTTT	NA	False	NA	-5	True	AATAAA	-18	NA	57003878	56984556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003097_57003157_57003579
ENSMUSG00000038215.16_56984557_57003878_3	chr8	-	1457	11	NNC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	51.662849321345	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATATGTGCCGATTTT	NA	False	NA	-5	True	AATAAA	-18	NA	57003878	56984556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003798
ENSMUSG00000038217.14_75358905_75361725_1	chr11	+	1893	4	ISM	ENSMUSG00000038217.14	ENSMUST00000108435.2	1112	5	0	0	0	0	intron_retention	FALSE	canonical	3	27	junction_1	3.09120616516523	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGTGAATGTGATTG	NA	False	NA	32	True	AATAAA	-24	NA	75358904	75361725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_75359204_75359382_75359466_75359667_75359751_75360297
ENSMUSG00000038225.16_47005104_47031549_3	chr8	-	1397	13	NIC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	14099	23525	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGACTCCAAACTCGCGCC	NA	False	NA	NA	False	NA	NA	NA	47031549	47005103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ENSMUSG00000038225.16_47005104_47031669_1	chr8	-	1502	13	NIC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	13979	23525	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGACTCCAAACTCGCGCC	NA	False	NA	NA	False	NA	NA	NA	47031669	47005103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014859_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ENSMUSG00000038225.16_47005104_47031669_2	chr8	-	1623	14	NIC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	13979	23525	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGACTCCAAACTCGCGCC	NA	False	NA	NA	False	NA	NA	NA	47031669	47005103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ENSMUSG00000038225.16_47005104_47031669_3	chr8	-	1517	13	NIC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	13979	23525	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGACTCCAAACTCGCGCC	NA	False	NA	NA	False	NA	NA	NA	47031669	47005103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ENSMUSG00000038225.16_47005104_47032750_1	chr8	-	2598	13	NIC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	12898	23525	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGACTCCAAACTCGCGCC	NA	False	NA	NA	False	NA	NA	NA	47032750	47005103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ENSMUSG00000038225.16_47031632_47070235_1	chr8	-	2091	14	FSM	ENSMUSG00000038225.16	ENSMUST00000209787.2	1833	14	8	-266	0	266	multi-exon	FALSE	canonical	3	92	junction_6	19.6766764885012	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGCCTGGTGATGACT	NA	False	NA	-4	True	ATTAAA	-19	NA	47070235	47031631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ENSMUSG00000038235.5_171265147_171291578_1	chr1	+	1844	10	NNC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	0	365	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	101.270204507484	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTTTTGTTGAACATG	NA	False	NA	15	True	AATAAA	-17	NA	171265146	171291578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290456_171290509_171290626_171291388_171291411
ENSMUSG00000038239.12_44988002_44988398_1	chr7	+	242	2	ISM	ENSMUSG00000038239.12	ENSMUST00000085351.7	2411	6	3288	0	3231	0	3prime_fragment	FALSE	canonical	2	4	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTCCCGAGTGGGGT	1088	False	NA	NA	False	AATAAA	-16	NA	44988001	44988398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_44988150_44988304
ENSMUSG00000038240.14_43097513_43259098_1	chr10	+	1402	5	NNC	ENSMUSG00000038240.14	novel	4075	8	NA	NA	0	-22293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.5614803103299	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGTTTGCTGGGCAT	NA	False	NA	NA	False	AATAAA	-15	NA	43097512	43259098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_43098057_43174794_43174930_43221523_43221723_43248130_43248206_43258649
ENSMUSG00000038240.14_43097596_43316598_1	chr10	+	2013	8	FSM	ENSMUSG00000038240.14	ENSMUST00000095725.11	2127	8	114	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	6.25316246521123	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAAGTGTCTGCCTTTC	NA	False	NA	NA	False	ATTAAA	-28	NA	43097595	43316598	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_43098057_43174794_43174930_43221523_43221723_43248130_43248206_43269866_43270041_43271556_43271689_43289510_43289544_43315794
ENSMUSG00000038252.14_125144970_125168566_1	chr6	-	4531	32	FSM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	98	0	0	0	multi-exon	TRUE	canonical	3	436	junction_21	78.9640126675822	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3493	False	NA	-9	True	AATAAA	-20	NA	125168566	125144969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ENSMUSG00000038260.11_44952782_44954766_1	chr7	-	717	5	FSM	ENSMUSG00000038260.11	ENSMUST00000210311.2	498	5	0	-219	0	0	multi-exon	FALSE	canonical	2	4	junction_4	72.5857251806442	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGCACATGCTTGGCT	NA	False	NA	-10	True	AATAAA	-15	NA	44954766	44952781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954696
ENSMUSG00000038274.14_6107984_6109549_1	chr19	+	494	5	NNC	ENSMUSG00000038274.14	novel	613	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6950.25353854088	77364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	1092	False	NA	4	True	AATAAA	-16	NA	6107983	6109549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_6108032_6108275_6108356_6108457_6108603_6109179_6109230_6109378
ENSMUSG00000038279.11_125108872_125121025_1	chr6	+	1906	16	FSM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	0	691	0	-691	multi-exon	TRUE	canonical	0	0	junction_7	206.283558885983	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACGGTAGTCAGCCCAC	5437	False	NA	NA	False	NA	NA	NA	125108871	125121025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ENSMUSG00000038279.11_125108872_125121308_1	chr6	+	2189	16	FSM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	0	408	0	-408	multi-exon	FALSE	canonical	0	0	junction_7	206.283558885983	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCCCTTCCAGGGTTGAG	5437	False	NA	NA	False	NA	NA	NA	125108871	125121308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ENSMUSG00000038279.11_125108872_125121716_1	chr6	+	2592	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	257.356786496015	2545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5437	False	NA	25	True	AATATA	-17	NA	125108871	125121716	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110681_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ENSMUSG00000038279.11_125108872_125121716_2	chr6	+	2623	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	267.552229584348	2642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5437	False	NA	25	True	AATATA	-17	NA	125108871	125121716	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125108993_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ENSMUSG00000038279.11_125108872_125121716_3	chr6	+	2591	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	279.043286168214	2517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5437	False	NA	25	True	AATATA	-17	NA	125108871	125121716	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111515_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ENSMUSG00000038286.12_34221622_34228688_1	chr13	+	413	2	ISM	ENSMUSG00000038286.12	ENSMUST00000221124.2	2009	5	0	17181	0	-5618	5prime_fragment	FALSE	canonical	3	167	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCTTACTCTTTTAC	NA	False	NA	NA	False	AGTAAA	-16	NA	34221621	34228688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_+_34221753_34228406
ENSMUSG00000038295.15_24589358_24592964_1	chr5	-	2059	9	ISM	ENSMUSG00000038295.15	ENSMUST00000059401.7	3902	14	4177	179	0	-179	3prime_fragment	FALSE	canonical	3	11	junction_1	5.09748712602592	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTTCAATCATTGTAA	9294	False	NA	NA	False	ATTAAA	-14	NA	24592964	24589357	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_24590070_24590221_24590362_24590443_24590568_24590750_24590848_24591005_24591140_24591307_24591545_24591945_24592126_24592384_24592542_24592686
ENSMUSG00000038299.17_32970364_32999086_2	chr18	+	2808	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	86	1561	0	-367	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGCCAAGTGTGCTG	9050	False	NA	13	True	AATAAA	-24	NA	32970363	32999086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ENSMUSG00000038299.17_32970364_32999453_2	chr18	+	3175	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	86	1194	0	0	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	2719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGGTTCTTTTTTTCT	9050	False	NA	14	True	ATTAAA	-7	NA	32970363	32999453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ENSMUSG00000038299.17_32970364_32999453_3	chr18	+	3140	24	NNC	ENSMUSG00000038299.17	novel	2906	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	158.489013770111	2699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGGTTCTTTTTTTCT	9050	False	NA	14	True	ATTAAA	-7	NA	32970363	32999453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905_32999190_32999224
ENSMUSG00000038301.16_51500962_51567248_1	chr6	+	1988	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	81	411	0	-402	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGAGCCTTCTTACAG	NA	False	NA	NA	False	AATAAA	-17	NA	51500961	51567248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ENSMUSG00000038301.16_51500962_51567659_1	chr6	+	2514	8	NNC	ENSMUSG00000038301.16	novel	2480	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	142.424917563105	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCGATTTCTTACTT	NA	False	NA	NA	False	ATTAAA	-24	NA	51500961	51567659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_51501015_51538997_51539045_51546773_51546889_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ENSMUSG00000038301.16_51521503_51567248_1	chr6	+	2062	7	FSM	ENSMUSG00000038301.16	ENSMUST00000179365.8	2464	7	0	402	0	-402	multi-exon	FALSE	canonical	3	50	junction_1	112.931272118144	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGAGCCTTCTTACAG	NA	False	NA	NA	False	AATAAA	-17	NA	51521502	51567248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_51521630_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ENSMUSG00000038312.11_155543947_155571395_1	chr2	-	1940	11	FSM	ENSMUSG00000038312.11	ENSMUST00000040833.5	2290	11	0	350	0	-350	multi-exon	TRUE	canonical	3	287	junction_6	17.8672885463911	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTTTTACATGCTGGAT	NA	False	NA	-11	True	AATAAA	-15	NA	155571395	155543946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
ENSMUSG00000038312.11_155544417_155571395_1	chr2	-	1470	11	FSM	ENSMUSG00000038312.11	ENSMUST00000040833.5	2290	11	0	820	0	-820	multi-exon	FALSE	canonical	3	287	junction_6	17.8672885463911	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTCATCCACAACAATGG	NA	False	NA	NA	False	NA	NA	NA	155571395	155544416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
ENSMUSG00000038324.14_155476191_155478220_1	chr2	-	1182	3	ISM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	56032	-37	1436	0	3prime_fragment	FALSE	canonical	3	352	junction_1	3	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTTTGTCCATGATGT	NA	False	NA	7	True	ATTAAA	-42	NA	155478220	155476190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_155477061_155477155_155477363_155478115
ENSMUSG00000038332.14_41686185_41784420_1	chr10	+	3555	10	FSM	ENSMUSG00000038332.14	ENSMUST00000099931.11	3809	10	254	0	254	0	multi-exon	FALSE	canonical	3	40	junction_1	18.7662686623146	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTTATTAATTTCAT	246	False	NA	8	True	AATAAA	-15	NA	41686184	41784420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_41687297_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
ENSMUSG00000038335.14_74788924_74799320_1	chr11	+	2521	15	FSM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	20	848	0	0	multi-exon	FALSE	canonical	3	655	junction_8	75.3882467968452	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTGTCCATGTCTCT	NA	False	NA	NA	False	NA	NA	NA	74788923	74799320	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ENSMUSG00000038335.14_74798996_74803958_1	chr11	+	1481	7	NIC	ENSMUSG00000038335.14	novel	769	5	NA	NA	2959	3790	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAAACCCAGGAACAAGG	NA	False	NA	NA	False	NA	NA	NA	74798995	74803958	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787
ENSMUSG00000038344.15_161571913_161612450_1	chrX	-	2673	5	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	0	9998	0	0	5prime_fragment	FALSE	canonical	3	191	junction_2	21.2132034355964	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTATGTCTCATCTCCAA	NA	False	NA	-6	True	AATAAA	-17	NA	161612450	161571912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ENSMUSG00000038352.16_97880404_97886755_1	chr11	-	1319	6	FSM	ENSMUSG00000038352.16	ENSMUST00000042971.16	1571	6	252	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.57681974534503	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTCACTTCTTATTTTTG	NA	False	NA	3	True	ATTAAA	-26	NA	97886755	97880403	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97881166_97883107_97883260_97884250_97884335_97885163_97885312_97885892_97885954_97886643
ENSMUSG00000038354.14_96592304_96598350_1	chr3	+	644	5	ISM	ENSMUSG00000038354.14	ENSMUST00000122960.6	3295	14	14661	-25	4895	2	3prime_fragment	FALSE	canonical	3	58	junction_4	19.7294196569489	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTGTGGTTTTTGTC	NA	False	NA	18	True	AATAAA	-18	NA	96592303	96598350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_96592491_96596461_96596552_96596760_96596827_96597507_96597613_96598154
ENSMUSG00000038368.17_88012867_88115458_1	chr4	+	1738	11	ISM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	0	213785	0	14177	5prime_fragment	FALSE	canonical	3	105	junction_5	16.9292646030476	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAATTCAGTATATTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	88012866	88115458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995
ENSMUSG00000038369.15_155232589_155247728_1	chr2	-	1144	5	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	34975	13	-2247	0	3prime_fragment	FALSE	canonical	3	35	junction_4	56.3044181214938	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTTAAAGGTATGTTAT	2326	False	NA	-23	True	AATAAA	-13	NA	155247728	155232588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155247394
ENSMUSG00000038369.15_155232589_155256899_1	chr2	-	1100	6	NIC	ENSMUSG00000038369.15	novel	6872	14	NA	NA	3924	0	combination_of_known_splicesites	FALSE	canonical	3	145	junction_4	14.7431339951857	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTTAAAGGTATGTTAT	NA	False	NA	-23	True	AATAAA	-13	NA	155256899	155232588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731
ENSMUSG00000038374.11_96537256_96539216_1	chr3	+	708	6	NNC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	1747.70764145494	5518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539009
ENSMUSG00000038374.11_96537256_96539216_2	chr3	+	715	6	NNC	ENSMUSG00000038374.11	novel	2608	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1731.84255635436	3481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_96537354_96537621_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
ENSMUSG00000038374.11_96537256_96539216_3	chr3	+	702	6	NNC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1756.05239101799	3609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_96537345_96537617_96537682_96537807_96537871_96538181_96538319_96538747_96538885_96539004
ENSMUSG00000038374.11_96537256_96539216_4	chr3	+	701	6	NNC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1747.70764145494	1107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539016
ENSMUSG00000038374.11_96537256_96539216_5	chr3	+	704	6	NNC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1756.05239101799	5751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_96537345_96537617_96537684_96537807_96537871_96538181_96538319_96538747_96538885_96539004
ENSMUSG00000038374.11_96537256_96539216_6	chr3	+	719	6	NNC	ENSMUSG00000038374.11	novel	2608	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1731.84255635436	1728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_96537345_96537608_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
ENSMUSG00000038374.11_96537256_96540223_1	chr3	+	231	2	NNC	ENSMUSG00000038374.11	novel	2757	5	NA	NA	0	-884	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTATTGGCCCTTCTCTTC	8642	False	NA	6	True	ATTAAA	-18	NA	96537255	96540223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_96537287_96540023
ENSMUSG00000038374.11_96537256_96540223_2	chr3	+	1577	7	NNC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	0	-884	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1962.39819268839	7254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTATTGGCCCTTCTCTTC	8642	False	NA	6	True	ATTAAA	-18	NA	96537255	96540223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539009_96539844_96539981
ENSMUSG00000038374.11_96537256_96540223_3	chr3	+	1720	6	FSM	ENSMUSG00000038374.11	ENSMUST00000196456.5	2604	6	0	884	0	-884	multi-exon	FALSE	canonical	3	2213	junction_2	872.428931202995	16382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTATTGGCCCTTCTCTTC	8642	False	NA	6	True	ATTAAA	-18	NA	96537255	96540223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539004
ENSMUSG00000038374.11_96537256_96540223_4	chr3	+	1466	7	NNC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	0	-884	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1674.23017135239	15327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTATTGGCCCTTCTCTTC	8642	False	NA	6	True	ATTAAA	-18	NA	96537255	96540223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539004_96539770_96540023
ENSMUSG00000038374.11_96538811_96539216_1	chr3	+	284	2	NNC	ENSMUSG00000038374.11	novel	560	2	NA	NA	274	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_1	0	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	NA	False	NA	16	True	AATAAA	-20	NA	96538810	96539216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_96538885_96539006
ENSMUSG00000038379.16_83716743_83754442_1	chr9	+	2984	23	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	74.5741768391691	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGGTCAGTTTCTTCA	NA	False	NA	13	True	AATAAA	-24	NA	83716742	83754442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83726402_83726485_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ENSMUSG00000038387.10_44667507_44671071_1	chr7	+	873	6	FSM	ENSMUSG00000038387.10	ENSMUST00000044111.10	995	6	122	0	0	0	multi-exon	FALSE	canonical	3	253	junction_4	17.1860408471527	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATGCTTTTTATTTGA	NA	False	NA	9	True	AATAAA	-17	NA	44667506	44671071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44667593_44669523_44669612_44669726_44669830_44669913_44670023_44670510_44670630_44670703
ENSMUSG00000038393.15_96465276_96467881_1	chr3	+	1506	8	FSM	ENSMUSG00000038393.15	ENSMUST00000074519.13	2827	8	3	1318	0	0	multi-exon	FALSE	canonical	3	279	junction_1	78.2390371795021	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGCCTCTCTGCTTGA	NA	False	NA	NA	False	AATGAA	-21	NA	96465275	96467881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96465802_96466204_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ENSMUSG00000038412.9_121677629_121686692_1	chr9	-	1474	5	NNC	ENSMUSG00000038412.9	novel	2232	4	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	936.441502444226	7780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGATGTCTTGTTTTT	NA	False	NA	-3	True	ATTAAA	-13	NA	121686692	121677628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_121678155_121678176_121678756_121679253_121679389_121681556_121681676_121686577
ENSMUSG00000038412.9_121677629_121686692_2	chr9	-	1496	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	736	0	-13	0	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	7783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGATGTCTTGTTTTT	NA	False	NA	-3	True	ATTAAA	-13	NA	121686692	121677628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
ENSMUSG00000038412.9_121678604_121686630_1	chr9	-	611	5	NIC	ENSMUSG00000038412.9	novel	713	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	1100.26050892505	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACGGTATTGAATATTG	NA	False	NA	-25	True	AATAAA	-20	NA	121686630	121678603	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_121678756_121679253_121679389_121681556_121681676_121685786_121685939_121686577
ENSMUSG00000038412.9_121678604_121686692_2	chr9	-	511	4	NNC	ENSMUSG00000038412.9	novel	605	5	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1003.87261254714	6012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACGGTATTGAATATTG	NA	False	NA	-25	True	AATAAA	-20	NA	121686692	121678603	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_121678756_121679253_121679389_121681566_121681676_121686577
ENSMUSG00000038416.16_13807677_13831938_1	chr8	+	2294	18	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	171.014012254971	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCAAGCTGGTAGAGTG	NA	False	NA	17	True	AATAAA	-24	NA	13807676	13831938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813825_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ENSMUSG00000038422.3_62417371_62420513_1	chr4	-	1079	2	FSM	ENSMUSG00000038422.3	ENSMUST00000037820.3	1205	2	0	126	0	-126	multi-exon	FALSE	canonical	3	14	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTTCTCTCTCACCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	62420513	62417370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62418331_62420394
ENSMUSG00000038425.19_70641758_70663341_1	chr18	-	2424	10	FSM	ENSMUSG00000038425.19	ENSMUST00000043286.15	2591	10	164	3	-2	0	multi-exon	FALSE	canonical	3	102	junction_9	76.3322820564839	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663341	70641757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70663258
ENSMUSG00000038425.19_70641758_70663341_2	chr18	-	2298	9	NIC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	116	junction_8	75.0961883187156	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663341	70641757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70663258
ENSMUSG00000038425.19_70641758_70663341_3	chr18	-	2861	10	FSM	ENSMUSG00000038425.19	ENSMUST00000161542.8	2736	10	-132	7	-2	0	multi-exon	FALSE	canonical	3	36	junction_9	94.1501296524877	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663341	70641757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70662821
ENSMUSG00000038429.11_124792001_124806404_1	chr6	-	3028	20	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_16	192.331489002841	1623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTACGGGGGCTGAC	7899	False	NA	-27	True	AATACA	-9	NA	124806404	124792000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801611_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ENSMUSG00000038446.9_40707617_40759091_1	chr10	-	3318	15	FSM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	216	0	-3	0	multi-exon	FALSE	canonical	3	163	junction_10	18.6027208894236	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGAGTTCATTGTG	NA	False	NA	-3	True	AATAAA	-19	NA	40759091	40707616	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819_40743907_40758882
ENSMUSG00000038446.9_40709090_40759091_1	chr10	-	1845	15	FSM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	216	1473	-3	-1473	multi-exon	FALSE	canonical	3	163	junction_10	18.6027208894236	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGATTTATAGGTAATCT	NA	False	NA	NA	False	ATTAAA	-16	NA	40759091	40709089	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819_40743907_40758882
ENSMUSG00000038462.4_30724435_30729345_1	chr13	-	1219	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	0	144	0	-144	multi-exon	FALSE	canonical	3	2063	junction_1	0	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTTCTCATCTAAATT	NA	False	NA	-15	True	AATAAA	-19	NA	30729345	30724434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_30725325_30729016
ENSMUSG00000038467.16_154499095_154536201_1	chr2	+	955	5	FSM	ENSMUSG00000038467.16	ENSMUST00000044277.10	1616	5	157	504	157	0	multi-exon	FALSE	canonical	3	34	junction_1	13.5738719604982	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGCTAAGCCCACTGCT	NA	False	NA	25	True	AATAAA	-33	NA	154499094	154536201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_154499292_154531437_154531616_154533129_154533245_154534468_154534596_154535863
ENSMUSG00000038482.12_13388791_13428167_1	chr8	+	2190	12	FSM	ENSMUSG00000038482.12	ENSMUST00000209885.2	2511	12	40	281	0	-275	multi-exon	FALSE	canonical	3	547	junction_1	150.974903502547	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAACTCAAAATTTGTCA	2143	False	NA	NA	False	ATTAAA	-23	NA	13388790	13428167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUSG00000038482.12_13388791_13428167_2	chr8	+	2123	11	FSM	ENSMUSG00000038482.12	ENSMUST00000209396.2	2421	11	23	275	0	-275	multi-exon	FALSE	canonical	3	161	junction_2	290.39449030586	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAACTCAAAATTTGTCA	2143	False	NA	NA	False	ATTAAA	-23	NA	13388790	13428167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_13388807_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUSG00000038482.12_13388791_13428442_1	chr8	+	2568	13	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_5	371.107314518171	1597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2143	False	NA	88	True	AATAAA	-18	NA	13388790	13428442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420171_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUSG00000038489.9_141053041_141055045_1	chr7	-	382	2	FSM	ENSMUSG00000038489.9	ENSMUST00000043870.9	1650	2	0	1268	0	-1268	multi-exon	FALSE	canonical	3	1072	junction_1	0	5572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTCTAACTTCCAAGGTG	8000	False	NA	-29	True	AGTAAA	-21	NA	141055045	141053040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_141053318_141054940
ENSMUSG00000038500.16_36283433_36290191_1	chr17	-	1861	5	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	22.0056810846654	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTCTCATTTCTCTG	NA	False	NA	-1	True	AATAAA	-16	NA	36290191	36283432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602_36289674_36290018
ENSMUSG00000038500.16_36283433_36290191_2	chr17	-	1790	4	FSM	ENSMUSG00000038500.16	ENSMUST00000055454.14	2727	4	937	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	38.4216374224502	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTCTCATTTCTCTG	NA	False	NA	-1	True	AATAAA	-16	NA	36290191	36283432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36284696_36285414_36285706_36289272_36289336_36290018
ENSMUSG00000038503.16_83541470_83547148_1	chr7	+	638	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	262	3592	-68	0	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCCCAAACCACGTGCT	NA	False	NA	NA	False	AATAAA	-32	NA	83541469	83547148	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_83541684_83544737_83544971_83546957
ENSMUSG00000038503.16_83541470_83548384_1	chr7	+	1874	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	262	2356	-68	1096	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	4065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGATAGGTATATTC	NA	False	NA	20	True	AATAAA	-15	NA	83541469	83548384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_83541684_83544737_83544971_83546957
ENSMUSG00000038508.8_71082044_71083515_1	chr8	-	956	2	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	1230	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCGTCTCAGTGACCTT	2245	False	NA	-7	True	AATAAA	-17	NA	71083515	71082043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_71082825_71083340
ENSMUSG00000038510.13_40099423_40122999_1	chr10	-	1257	10	NNC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	386.188785152777	4967	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATGTCACAGTGTGG	6590	False	NA	42	True	TTTAAA	-17	NA	40122999	40099422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_40099911_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
ENSMUSG00000038515.11_13226922_13250587_1	chr8	-	1220	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	33	1760	0	0	multi-exon	FALSE	canonical	3	341	junction_2	30.9812319750826	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTCCATTTTTTCCTA	3670	False	NA	-21	True	TTTAAA	-18	NA	13250587	13226921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ENSMUSG00000038518.16_44884846_45055883_1	chr13	+	1590	7	ISM	ENSMUSG00000038518.16	ENSMUST00000173704.8	4135	19	596	17701	0	-851	internal_fragment	FALSE	canonical	3	632	junction_5	51.2133337672481	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCACAAACCCAGTTCAG	NA	False	NA	NA	False	NA	NA	NA	44884845	45055883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701
ENSMUSG00000038520.16_44490457_44498319_1	chr7	-	2160	17	FSM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	180	6410	0	0	multi-exon	FALSE	canonical	3	189	junction_4	26.4359485360371	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGCTGGCTGGCATCAG	7883	False	NA	-11	True	AATAAA	-14	NA	44498319	44490456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ENSMUSG00000038520.16_44490457_44498499_1	chr7	-	2340	17	FSM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	0	6410	0	0	multi-exon	FALSE	canonical	3	189	junction_4	26.4359485360371	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGCTGGCTGGCATCAG	7703	False	NA	-11	True	AATAAA	-14	NA	44498499	44490456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ENSMUSG00000038525.17_21851015_21862312_1	chr5	+	1082	5	NNC	ENSMUSG00000038525.17	novel	2700	5	NA	NA	0	-4302	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	180.301656953007	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCATTGCTATGTTTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	21851014	21862312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21861910
ENSMUSG00000038533.16_154278415_154373519_1	chr2	+	1780	10	ISM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	14	7757	0	0	5prime_fragment	TRUE	canonical	3	122	junction_9	133.715378581283	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAGTCTACCACACACA	5317	False	NA	12	True	AATAAA	-17	NA	154278414	154373519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144
ENSMUSG00000038533.16_154278415_154377703_1	chr2	+	2493	11	FSM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	14	3573	0	819	multi-exon	FALSE	canonical	3	122	junction_9	126.860553364708	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGATCATTTTGGACAA	5317	False	NA	NA	False	ATTAAA	-17	NA	154278414	154377703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
ENSMUSG00000038534.20_96941646_96959402_1	chr11	+	3251	23	FSM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	192	328	0	305	multi-exon	FALSE	canonical	3	35	junction_2	33.8534762061397	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCCGCAGCTTCAGCTC	NA	False	NA	NA	False	NA	NA	NA	96941645	96959402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ENSMUSG00000038534.20_96941646_96959730_1	chr11	+	3579	23	FSM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	192	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	33.8534762061397	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96941645	96959730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ENSMUSG00000038534.20_96958063_96959730_1	chr11	+	1343	4	NNC	ENSMUSG00000038534.20	novel	3771	23	NA	NA	354	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	66.0504857413378	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96958062	96959730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_96958176_96958242_96958387_96958490_96958614_96958767
ENSMUSG00000038534.20_96958063_96959730_2	chr11	+	1326	4	ISM	ENSMUSG00000038534.20	ENSMUST00000143360.2	920	5	354	-633	354	0	3prime_fragment	FALSE	canonical	3	130	junction_3	12.5521135891752	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96958062	96959730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_96958176_96958259_96958387_96958490_96958614_96958767
ENSMUSG00000038544.15_59769637_59783843_1	chr4	-	3133	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	-35	-1660	-5	0	multi-exon	FALSE	canonical	3	138	junction_3	91.8416511659546	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTACTGCATATGTTAA	-5	True	NA	NA	False	NA	NA	NA	59783843	59769636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
ENSMUSG00000038544.15_59771297_59783843_1	chr4	-	1554	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	23	1660	-5	0	multi-exon	FALSE	canonical	3	236	junction_4	41.7814252988095	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTTTGTAAGGATCCT	-5	True	NA	-6	True	ATTAAA	-18	NA	59783843	59771296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
ENSMUSG00000038544.15_59771666_59783843_1	chr4	-	1104	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	-35	369	-5	-369	multi-exon	FALSE	canonical	3	138	junction_3	91.8416511659546	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTGACTAAATACTGTT	-5	True	NA	NA	False	AATAAA	-23	NA	59783843	59771665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
ENSMUSG00000038544.15_59771666_59783843_2	chr4	-	1185	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	23	2029	-5	-369	multi-exon	FALSE	canonical	3	236	junction_4	41.7814252988095	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTGACTAAATACTGTT	-5	True	NA	NA	False	AATAAA	-23	NA	59783843	59771665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
ENSMUSG00000038544.15_59774088_59783843_1	chr4	-	1525	4	NNC	ENSMUSG00000038544.15	novel	1654	3	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	109.77552854196	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTTATATAATTATTTT	-5	True	NA	NA	False	AATAAA	-20	NA	59783843	59774087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_59775313_59775446_59775550_59782253_59782335_59783727
ENSMUSG00000038544.15_59774230_59783843_1	chr4	-	1383	4	NNC	ENSMUSG00000038544.15	novel	1654	3	NA	NA	-5	-142	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	109.77552854196	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGGTTATTCAGTTTG	-5	True	NA	-3	True	NA	NA	NA	59783843	59774229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_59775313_59775446_59775550_59782253_59782335_59783727
ENSMUSG00000038544.15_59774230_59783843_2	chr4	-	1517	3	FSM	ENSMUSG00000038544.15	ENSMUST00000128548.2	1654	3	-5	142	-5	-142	multi-exon	FALSE	canonical	3	236	junction_2	17	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGGTTATTCAGTTTG	-5	True	NA	-3	True	NA	NA	NA	59783843	59774229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_59775550_59782253_59782335_59783727
ENSMUSG00000038544.15_59775294_59783843_1	chr4	-	453	3	FSM	ENSMUSG00000038544.15	ENSMUST00000128548.2	1654	3	-5	1206	-5	-1206	multi-exon	FALSE	canonical	3	236	junction_2	17	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGCTGTTGTCTGAGAT	-5	True	NA	NA	False	NA	NA	NA	59783843	59775293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_59775550_59782253_59782335_59783727
ENSMUSG00000038545.14_46972974_46975290_1	chr17	+	1060	5	FSM	ENSMUSG00000038545.14	ENSMUST00000125949.2	1321	5	261	0	261	0	multi-exon	TRUE	canonical	3	95	junction_4	5.8309518948453	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGTATGGGACTGCTA	NA	False	NA	19	True	AATAAA	-20	NA	46972973	46975290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
ENSMUSG00000038550.11_95785815_95789386_1	chr3	-	1443	6	NIC	ENSMUSG00000038550.11	novel	1398	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	52.0292225580971	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTTTTTTTTTTTTT	NA	False	NA	-1	True	ATTAAA	-15	NA	95789386	95785814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789266
ENSMUSG00000038550.11_95785815_95789517_1	chr3	-	1064	6	NIC	ENSMUSG00000038550.11	novel	1939	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	70.7615714918769	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTTTTTTTTTTTTT	NA	False	NA	-1	True	ATTAAA	-15	NA	95789517	95785814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788592_95789466
ENSMUSG00000038550.11_95785815_95789517_2	chr3	-	965	5	FSM	ENSMUSG00000038550.11	ENSMUST00000161866.8	710	5	46	-301	0	0	multi-exon	FALSE	canonical	3	10	junction_4	75.7396857664461	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTTTTTTTTTTTTT	NA	False	NA	-1	True	ATTAAA	-15	NA	95789517	95785814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95789466
ENSMUSG00000038563.15_82297822_82308234_1	chr7	+	1084	5	NNC	ENSMUSG00000038563.15	novel	3610	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	60.1139542868376	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGGCCTGTGGCTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	82297821	82308234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82307474
ENSMUSG00000038576.16_182591775_182724156_1	chr1	+	3059	9	FSM	ENSMUSG00000038576.16	ENSMUST00000153348.8	1898	9	198	-1359	-185	0	multi-exon	FALSE	canonical	3	16	junction_5	5.55512151082224	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAGTTTGAAGTGTGACT	NA	False	NA	NA	False	ATTAAA	-16	NA	182591774	182724156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_182591962_182592570_182592754_182660627_182660841_182681521_182681696_182685986_182686176_182714904_182715097_182716332_182716478_182719447_182719831_182722763
ENSMUSG00000038587.11_4216380_4304302_1	chr10	+	1565	3	ISM	ENSMUSG00000038587.11	ENSMUST00000045730.7	6195	4	0	5168	0	650	5prime_fragment	FALSE	canonical	3	1052	junction_2	17	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCGAAGGCATTGTCAGT	NA	False	NA	NA	False	NA	NA	NA	4216379	4304302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_4216669_4263742_4263858_4303141
ENSMUSG00000038587.11_4284545_4308936_1	chr10	+	5422	3	FSM	ENSMUSG00000038587.11	ENSMUST00000239373.2	5956	3	0	534	0	-534	multi-exon	FALSE	canonical	3	114	junction_1	774.5	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAACCTGCAGCAAACAGA	NA	False	NA	NA	False	NA	NA	NA	4284544	4308936	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_4284710_4303141_4307940_4308477
ENSMUSG00000038593.19_122344867_122380360_1	chr5	-	2950	8	NIC	ENSMUSG00000038593.19	novel	2201	13	NA	NA	9381	31044	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCGTGGCTGAGCCTAA	NA	False	NA	NA	False	NA	NA	NA	122380360	122344866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_122345220_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
ENSMUSG00000038593.19_122347972_122380360_1	chr5	-	2610	8	NIC	ENSMUSG00000038593.19	novel	2201	13	NA	NA	9381	27939	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTAGCTCTGTTCTCATCC	NA	False	NA	NA	False	NA	NA	NA	122380360	122347971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_122347985_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
ENSMUSG00000038600.13_38025418_38073996_1	chr6	-	3240	21	ISM	ENSMUSG00000038600.13	ENSMUST00000114908.5	3307	22	12488	0	124	0	3prime_fragment	FALSE	canonical	2	4	junction_15	2.50199920063936	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGATGTCGTTATTC	NA	False	NA	NA	False	NA	NA	NA	38073996	38025417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_38026019_38027400_38027573_38028378_38028497_38029944_38030053_38031489_38031592_38035659_38035877_38037904_38038024_38044671_38044766_38048783_38048942_38051056_38051197_38053620_38053772_38055680_38055894_38058965_38059060_38059854_38059938_38062903_38063031_38064864_38064960_38065547_38065674_38069335_38069431_38069694_38069774_38070872_38071007_38073782
ENSMUSG00000038607.13_59035190_59041888_1	chr4	+	1075	3	FSM	ENSMUSG00000038607.13	ENSMUST00000041160.13	1192	3	102	15	102	-15	multi-exon	FALSE	canonical	3	257	junction_2	16.5	1629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCATGACAGCAGTAGT	-22	True	NA	20	True	AATAAA	-20	NA	59035189	59041888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_59035319_59039226_59039359_59041074
ENSMUSG00000038611.18_140808697_140842663_1	chr7	+	5377	18	FSM	ENSMUSG00000038611.18	ENSMUST00000106027.9	5248	18	-5	-124	0	0	multi-exon	FALSE	canonical	3	178	junction_2	28.6346754247049	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGGACTGATGCTTAG	NA	False	NA	84	True	NA	NA	NA	140808696	140842663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ENSMUSG00000038612.17_95566945_95568326_1	chr3	+	684	2	ISM	ENSMUSG00000038612.17	ENSMUST00000178686.2	858	4	777	-192	777	192	3prime_fragment	FALSE	canonical	3	754	junction_1	0	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCCTGGAAGAGTCACT	7263	False	NA	34	True	AATAAA	-16	NA	95566944	95568326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_95567320_95568017
ENSMUSG00000038612.17_95566945_95569248_1	chr3	+	1606	2	ISM	ENSMUSG00000038612.17	ENSMUST00000178686.2	858	4	777	-1114	777	1114	3prime_fragment	FALSE	canonical	3	754	junction_1	0	778	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGGATTGCCAAGCTTTG	7263	False	NA	32	True	AATAAA	-23	NA	95566944	95569248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_95567320_95568017
ENSMUSG00000038612.17_95567006_95569425_1	chr3	+	1722	2	ISM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	907	1062	838	-1062	3prime_fragment	FALSE	canonical	3	754	junction_1	0	894	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACTTTGAACCTAAAT	7324	False	NA	NA	False	NA	NA	NA	95567005	95569425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_95567320_95568017
ENSMUSG00000038615.18_96708257_96714841_1	chr11	-	3373	3	NIC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-2	0	intron_retention	FALSE	canonical	3	71	junction_1	153.5	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96714841	96708256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_96711343_96712929_96713146_96714770
ENSMUSG00000038618.13_140795788_140798407_1	chr7	+	1346	6	FSM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	15	164	0	-161	multi-exon	FALSE	canonical	3	288	junction_1	23.1395764870492	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATAAATGGGTACAGTT	NA	False	NA	NA	False	NA	NA	NA	140795787	140798407	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
ENSMUSG00000038618.13_140795788_140798571_2	chr7	+	1505	6	NNC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	137.135553376942	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795787	140798571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_140795854_140796638_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
ENSMUSG00000038619.13_95532304_95534313_1	chr3	+	438	2	FSM	ENSMUSG00000038619.13	ENSMUST00000197050.2	937	2	-33	532	0	-532	multi-exon	FALSE	canonical	3	538	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGAATCTCTGCAATG	382	False	NA	NA	False	AGTAAA	-34	NA	95532303	95534313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95532488_95534059
ENSMUSG00000038619.13_95532304_95537803_1	chr3	+	654	5	NNC	ENSMUSG00000038619.13	novel	1130	4	NA	NA	0	-1610	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	231.406568618957	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCATCTCCGATCTTCTC	382	False	NA	21	True	NA	NA	NA	95532303	95537803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95532488_95534059_95534186_95535851_95536019_95536546_95536610_95537689
ENSMUSG00000038619.13_95532304_95537803_2	chr3	+	2262	3	FSM	ENSMUSG00000038619.13	ENSMUST00000037983.6	3845	3	-27	1610	0	-1610	multi-exon	FALSE	canonical	3	422	junction_2	58	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCATCTCCGATCTTCTC	382	False	NA	21	True	NA	NA	NA	95532303	95537803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95532488_95534059_95534186_95535851
ENSMUSG00000038619.13_95532304_95537803_3	chr3	+	646	5	NNC	ENSMUSG00000038619.13	novel	1130	4	NA	NA	0	-1610	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	225.514411956309	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCATCTCCGATCTTCTC	382	False	NA	21	True	NA	NA	NA	95532303	95537803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95532488_95534059_95534186_95535851_95536019_95536546_95536610_95537697
ENSMUSG00000038628.9_181506153_181510403_1	chr2	+	705	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	23	2220	0	-2220	multi-exon	FALSE	canonical	3	712	junction_2	38.5	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGTTTTCTCTGTGTAG	8919	False	NA	17	True	AATAAA	-28	NA	181506152	181510403	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181506363_181507738_181507827_181509996
ENSMUSG00000038628.9_181506153_181510741_1	chr2	+	1043	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	23	1882	0	-1882	multi-exon	FALSE	canonical	3	712	junction_2	38.5	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAAAGTCTGGAATTAC	8919	False	NA	NA	False	TATAAA	-16	NA	181506152	181510741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181506363_181507738_181507827_181509996
ENSMUSG00000038628.9_181506153_181511444_1	chr2	+	1746	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	23	1179	0	-1179	multi-exon	FALSE	canonical	3	712	junction_2	38.5	1823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGCCTCAGTTCTTGT	8919	False	NA	5	True	ATTAAA	-18	NA	181506152	181511444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181506363_181507738_181507827_181509996
ENSMUSG00000038633.6_182103533_182109789_1	chr1	-	1733	3	NIC	ENSMUSG00000038633.6	novel	2048	3	NA	NA	0	-196	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	557	2023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCCTTAGTGGAATTTC	NA	False	NA	-9	True	NA	NA	NA	182109789	182103532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_182104459_182106540_182107284_182109725
ENSMUSG00000038644.15_44182170_44198262_1	chr7	-	3520	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_17	279.491264378523	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTGTGGTCTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	44198262	44182169	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189873_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ENSMUSG00000038646.14_81412673_81418351_1	chr7	+	564	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	0	888	0	-877	multi-exon	FALSE	canonical	3	441	junction_1	195	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAATGCTTGTGTGTC	NA	False	NA	NA	False	NA	NA	NA	81412672	81418351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_81412805_81417274_81417472_81418116
ENSMUSG00000038646.14_81412673_81418613_1	chr7	+	826	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	0	626	0	-615	multi-exon	FALSE	canonical	3	441	junction_1	195	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTTTTGCTGTATGA	NA	False	NA	NA	False	AATAAA	-16	NA	81412672	81418613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_81412805_81417274_81417472_81418116
ENSMUSG00000038648.6_37308057_37419083_1	chr6	-	3217	12	FSM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	-2	3867	-2	3170	multi-exon	FALSE	canonical	3	82	junction_10	9.34552529156102	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCCTCTTTCATACAA	NA	False	NA	NA	False	ATTAAA	-25	NA	37419083	37308056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
ENSMUSG00000038663.8_81184100_81198792_1	chr7	-	1825	7	ISM	ENSMUSG00000038663.8	ENSMUST00000042318.6	3985	13	17900	1044	17900	-1044	3prime_fragment	TRUE	canonical	1	1	junction_1	2.40947204913349	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCCAGCCCCCAATTTT	NA	False	NA	NA	False	NA	NA	NA	81198792	81184099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_81184997_81186878_81187056_81190059_81190193_81191787_81191922_81194707_81194859_81195604_81195740_81198594
ENSMUSG00000038668.15_58435255_58553753_1	chr4	-	3312	4	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	-125	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_3	79.7927871983984	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	5	True	NA	-5	True	AATAAA	-22	NA	58553753	58435254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58553729
ENSMUSG00000038668.15_58435857_58553753_1	chr4	-	2710	4	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	-125	-602	combination_of_known_junctions	FALSE	canonical	3	105	junction_3	79.7927871983984	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACATAACTAGCAAATTTA	5	True	NA	NA	False	NA	NA	NA	58553753	58435856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58553729
ENSMUSG00000038670.12_44151123_44156642_1	chr7	-	1237	8	ISM	ENSMUSG00000038670.12	ENSMUST00000165208.4	3611	28	17438	0	1860	0	3prime_fragment	FALSE	canonical	2	4	junction_7	5.67845911838623	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTGTAGTTCTTGTCC	NA	False	NA	5	True	GATAAA	-37	NA	44156642	44151122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_44151267_44153060_44153248_44154422_44154560_44154659_44154820_44154989_44155130_44155475_44155672_44156231_44156321_44156458
ENSMUSG00000038671.16_181000283_181007127_1	chr2	-	1649	7	FSM	ENSMUSG00000038671.16	ENSMUST00000185118.8	2318	7	8	661	0	-605	multi-exon	FALSE	canonical	3	22	junction_2	105.887387770635	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTAGATGGTGGTTCCC	6146	False	NA	-6	True	AATAAA	-27	NA	181007127	181000282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_181001355_181001431_181001533_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ENSMUSG00000038671.16_181000283_181007127_2	chr2	-	1707	8	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	0	-605	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	90.1022095359781	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTAGATGGTGGTTCCC	6146	False	NA	-6	True	AATAAA	-27	NA	181007127	181000282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006492_181007011
ENSMUSG00000038671.16_181001108_181007127_1	chr2	-	824	7	FSM	ENSMUSG00000038671.16	ENSMUST00000185118.8	2318	7	8	1486	0	0	multi-exon	FALSE	canonical	3	22	junction_2	105.887387770635	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTGTAGGTATTCAGA	6146	False	NA	NA	False	NA	NA	NA	181007127	181001107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_181001355_181001431_181001533_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ENSMUSG00000038671.16_181001108_181007127_2	chr2	-	890	8	NNC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	102.502762531215	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTGTAGGTATTCAGA	6146	False	NA	NA	False	NA	NA	NA	181007127	181001107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_181001350_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ENSMUSG00000038671.16_181001108_181007127_3	chr2	-	895	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	70	1482	0	0	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTGTAGGTATTCAGA	6146	False	NA	NA	False	NA	NA	NA	181007127	181001107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ENSMUSG00000038671.16_181001108_181007127_4	chr2	-	1109	7	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	258	junction_2	25.5891687156022	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTGTAGGTATTCAGA	6146	False	NA	NA	False	NA	NA	NA	181007127	181001107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181006192_181006397_181006505_181007011
ENSMUSG00000038671.16_181001108_181007127_5	chr2	-	882	8	NNC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	103.810069898083	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTGTAGGTATTCAGA	6146	False	NA	NA	False	NA	NA	NA	181007127	181001107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006116_181006192_181006397_181006505_181007011
ENSMUSG00000038671.16_181001108_181007127_6	chr2	-	882	8	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	90.1022095359781	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTGTAGGTATTCAGA	6146	False	NA	NA	False	NA	NA	NA	181007127	181001107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006492_181007011
ENSMUSG00000038683.17_41154499_41166491_1	chr13	+	1716	10	NNC	ENSMUSG00000038683.17	novel	1722	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	209.753706246041	2829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCTTAATTACATTTAT	NA	False	NA	NA	False	AGTAAA	-28	NA	41154498	41166491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_41154890_41158212_41158376_41161497_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
ENSMUSG00000038683.17_41154742_41166491_1	chr13	+	1473	10	NNC	ENSMUSG00000038683.17	novel	1722	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	209.753706246041	2158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCTTAATTACATTTAT	NA	False	NA	NA	False	AGTAAA	-28	NA	41154741	41166491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_41154890_41158212_41158376_41161497_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
ENSMUSG00000038685.19_180961532_180998409_1	chr2	+	4247	36	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_31	64.100711575534	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961531	180998409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ENSMUSG00000038685.19_180961578_180997824_1	chr2	+	3775	34	FSM	ENSMUSG00000038685.19	ENSMUST00000108814.8	4322	34	0	547	0	14	multi-exon	FALSE	canonical	3	117	junction_31	42.9439380842258	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAACTTCCTCCTAGACTA	NA	False	NA	NA	False	NA	NA	NA	180961577	180997824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ENSMUSG00000038685.19_180961578_180998409_1	chr2	+	4066	35	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_33	59.5404619481285	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961577	180998409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ENSMUSG00000038690.16_145120516_145128353_1	chr5	-	428	4	FSM	ENSMUSG00000038690.16	ENSMUST00000161741.8	955	4	519	8	-15	0	multi-exon	FALSE	canonical	3	4948	junction_3	568.415341101909	30051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTGCCTGGTGTAGT	8616	False	NA	-10	True	AATAAA	-17	NA	145128353	145120515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_145120678_145121341_145121459_145123935_145124044_145128312
ENSMUSG00000038695.14_44117469_44121076_1	chr7	+	926	6	NIC	ENSMUSG00000038695.14	novel	922	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	25.8580741742304	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCCTGGGCTCAGCTC	4807	False	NA	24	True	AATAAA	-16	NA	44117468	44121076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_44117615_44117783_44117842_44118230_44118394_44119835_44119962_44120536_44120732_44120838
ENSMUSG00000038712.17_95190410_95203475_1	chr3	+	2670	10	FSM	ENSMUSG00000038712.17	ENSMUST00000107187.9	2827	10	155	2	-116	1	multi-exon	FALSE	canonical	3	130	junction_1	26.9118359384908	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCGTTCCTACCTTGG	NA	False	NA	13	True	AATAAA	-14	NA	95190409	95203475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ENSMUSG00000038712.17_95190410_95203475_2	chr3	+	2643	10	FSM	ENSMUSG00000038712.17	ENSMUST00000039537.14	2800	10	155	2	-116	1	multi-exon	FALSE	canonical	3	18	junction_8	52.7870167352017	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCGTTCCTACCTTGG	NA	False	NA	13	True	AATAAA	-14	NA	95190409	95203475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202610_95202737_95202961
ENSMUSG00000038712.17_95190796_95203475_2	chr3	+	2284	10	FSM	ENSMUSG00000038712.17	ENSMUST00000107187.9	2827	10	541	2	-117	1	multi-exon	FALSE	canonical	3	130	junction_1	26.9118359384908	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCGTTCCTACCTTGG	NA	False	NA	13	True	AATAAA	-14	NA	95190795	95203475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ENSMUSG00000038717.10_44824568_44832011_1	chr9	-	456	3	NNC	ENSMUSG00000038717.10	novel	544	3	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_1	2298	20155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTGTTTTCTCTGTC	NA	False	NA	-29	True	AATAAA	-19	NA	44832011	44824567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_44824765_44825954_44826110_44831907
ENSMUSG00000038729.25_57782180_57856321_1	chr4	+	1903	2	FSM	ENSMUSG00000038729.25	ENSMUST00000124581.2	784	2	0	-1119	0	-601	multi-exon	FALSE	canonical	3	11	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAACCCCTCCGAGGGCC	10	True	NA	NA	False	NA	NA	NA	57782179	57856321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_57782323_57854561
ENSMUSG00000038729.25_57782180_57856980_1	chr4	+	2562	2	FSM	ENSMUSG00000038729.25	ENSMUST00000124581.2	784	2	0	-1778	0	58	multi-exon	FALSE	canonical	3	11	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAAGAACGCCCCATCG	10	True	NA	NA	False	NA	NA	NA	57782179	57856980	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_57782323_57854561
ENSMUSG00000038729.25_57845248_57856980_1	chr4	+	2478	2	ISM	ENSMUSG00000038729.25	ENSMUST00000102903.8	6650	3	1	40002	0	58	5prime_fragment	FALSE	canonical	3	20	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAAGAACGCCCCATCG	-5	True	NA	NA	False	NA	NA	NA	57845247	57856980	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_57845307_57854561
ENSMUSG00000038736.11_44291488_44299263_1	chr15	-	603	5	NIC	ENSMUSG00000038736.11	novel	2600	10	NA	NA	-7560	-2468	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	805	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCGGGATCTGGCCACCC	NA	False	NA	NA	False	NA	NA	NA	44299263	44291487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_44291567_44292955_44293033_44295833_44295905_44297249_44297370_44299007
ENSMUSG00000038736.11_44291488_44299263_3	chr15	-	2020	4	NIC	ENSMUSG00000038736.11	novel	2600	10	NA	NA	-7560	-2468	intron_retention	FALSE	non_canonical	0	0	junction_1	0	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCGGGATCTGGCCACCC	NA	False	NA	NA	False	NA	NA	NA	44299263	44291487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_44291639_44292955_44293033_44295833_44297370_44299007
ENSMUSG00000038736.11_44291488_44299263_4	chr15	-	734	6	NIC	ENSMUSG00000038736.11	novel	2600	10	NA	NA	-7560	-2468	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	1214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCGGGATCTGGCCACCC	NA	False	NA	NA	False	NA	NA	NA	44299263	44291487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_44291639_44292955_44293033_44294086_44294191_44295833_44295905_44297294_44297370_44299007
ENSMUSG00000038736.11_44291488_44299263_5	chr15	-	557	5	NNC	ENSMUSG00000038736.11	novel	2600	10	NA	NA	-7560	-2468	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCGGGATCTGGCCACCC	NA	False	NA	NA	False	NA	NA	NA	44299263	44291487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_44291571_44292960_44293033_44295833_44295905_44297294_44297370_44299007
ENSMUSG00000038736.11_44291543_44299251_4	chr15	-	491	5	NIC	ENSMUSG00000038736.11	novel	2600	10	NA	NA	-7548	-2523	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCTCAGTAGCTCGGGC	NA	False	NA	NA	False	NA	NA	NA	44299251	44291542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_44291567_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ENSMUSG00000038742.8_20785104_20789180_1	chr9	-	1500	5	NNC	ENSMUSG00000038742.8	novel	1582	6	NA	NA	1843	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	45.3176290200624	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCTGTCTTCCTGT	NA	False	NA	-5	True	NA	NA	NA	20789180	20785103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20788582
ENSMUSG00000038742.8_20785104_20789180_2	chr9	-	2217	4	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1843	0	1843	0	3prime_fragment	FALSE	canonical	3	97	junction_3	15.9652400197707	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCTGTCTTCCTGT	NA	False	NA	-5	True	NA	NA	NA	20789180	20785103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687
ENSMUSG00000038742.8_20785104_20789180_4	chr9	-	1071	5	NNC	ENSMUSG00000038742.8	novel	1582	6	NA	NA	1843	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	50.2910280268757	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCTGTCTTCCTGT	NA	False	NA	-5	True	NA	NA	NA	20789180	20785103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20789011
ENSMUSG00000038742.8_20785104_20789373_1	chr9	-	931	5	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1650	0	1650	0	3prime_fragment	FALSE	canonical	3	59	junction_4	28.1646942110153	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCTGTCTTCCTGT	NA	False	NA	-5	True	NA	NA	NA	20789373	20785103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20789344
ENSMUSG00000038759.16_35154551_35224538_1	chr6	+	6239	43	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	77.4357498283185	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154550	35224538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166197_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ENSMUSG00000038762.16_36267711_36270413_1	chr17	-	1343	8	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	10240	0	-55	0	3prime_fragment	FALSE	canonical	3	941	junction_5	26.3872263469603	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGGGGTGCT	1833	False	NA	-12	True	AATAAA	-18	NA	36270413	36267710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327
ENSMUSG00000038762.16_36267711_36280653_1	chr17	-	3155	23	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	37	junction_20	195.081377383011	1650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGGGGTGCT	NA	False	NA	-12	True	AATAAA	-18	NA	36280653	36267710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274933_36275145_36275233_36275968_36276016_36280537
ENSMUSG00000038762.16_36270362_36280653_1	chr17	-	1870	16	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	0	2651	0	-800	5prime_fragment	FALSE	canonical	3	801	junction_5	67.8090128391663	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCTCTCAGCCCACCTGT	NA	False	NA	NA	False	NA	NA	NA	36280653	36270361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ENSMUSG00000038766.17_95111050_95125069_1	chr3	-	665	4	NIC	ENSMUSG00000038766.17	novel	1539	6	NA	NA	-4	-726	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	8.5764535535124	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCAGGTGTGTTTCTTT	8934	False	NA	NA	False	AAAACA	-19	NA	95125069	95111049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_95111237_95111951_95112120_95113773_95113914_95124899
ENSMUSG00000038770.18_145020694_145045571_1	chr5	-	1569	10	NNC	ENSMUSG00000038770.18	novel	676	8	NA	NA	-24731	-76606	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGAGGCCTAGAGGGAG	NA	False	NA	NA	False	NA	NA	NA	145045571	145020693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041319_145041507_145041702_145043854_145043946_145045186
ENSMUSG00000038770.18_145020694_145045571_2	chr5	-	1573	10	NNC	ENSMUSG00000038770.18	novel	676	8	NA	NA	-24731	-76606	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGAGGCCTAGAGGGAG	NA	False	NA	NA	False	NA	NA	NA	145045571	145020693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038075_145041251_145041328_145041507_145041702_145043854_145043946_145045186
ENSMUSG00000038770.18_145020694_145045571_3	chr5	-	1569	10	NNC	ENSMUSG00000038770.18	novel	676	8	NA	NA	-24731	-76606	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	923	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGAGGCCTAGAGGGAG	NA	False	NA	NA	False	NA	NA	NA	145045571	145020693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034034_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045186
ENSMUSG00000038770.18_145020694_145045571_4	chr5	-	1573	10	NNC	ENSMUSG00000038770.18	novel	676	8	NA	NA	-24731	-76606	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	982	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGAGGCCTAGAGGGAG	NA	False	NA	NA	False	NA	NA	NA	145045571	145020693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043859_145043946_145045186
ENSMUSG00000038774.10_50468765_50526721_1	chr10	+	2090	11	ISM	ENSMUSG00000038774.10	ENSMUST00000035606.10	7760	42	0	200860	0	-222	5prime_fragment	FALSE	canonical	3	83	junction_4	11.3265175583672	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCTGATTCTTGACGAG	NA	False	NA	NA	False	AAGAAA	-36	NA	50468764	50526721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807_50494368_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642
ENSMUSG00000038775.15_118892550_118900394_1	chr9	+	1411	9	NIC	ENSMUSG00000038775.15	novel	1645	11	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	4	junction_6	9.33993442161132	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	NA	False	NA	3	True	AATAAA	-16	NA	118892549	118900394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_118892670_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118899345_118899418_118899624_118899883_118900201
ENSMUSG00000038781.8_56304077_56307249_1	chr17	-	790	5	NIC	ENSMUSG00000038781.8	novel	1509	13	NA	NA	-1769	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	10.8972473588517	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGTGGCTGTAGGATT	NA	False	NA	-4	True	NA	NA	NA	56307249	56304076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_56304362_56304459_56304535_56304604_56304698_56304777_56304952_56307086
ENSMUSG00000038784.14_34999000_35110650_1	chr6	-	3514	12	NIC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	55.9338452220327	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGGGTGAGTCTTGTTC	7655	False	NA	-2	True	AATAAA	-20	NA	35110650	34998999	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ENSMUSG00000038793.9_180764436_180765965_1	chr1	+	1173	2	FSM	ENSMUSG00000038793.9	ENSMUST00000132087.2	583	2	0	-590	0	0	multi-exon	FALSE	canonical	3	265	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTTGTTTCCTTATT	NA	False	NA	8	True	AATAAA	-17	NA	180764435	180765965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180764820_180765176
ENSMUSG00000038801.7_140425935_140426682_1	chr7	+	396	2	ISM	ENSMUSG00000038801.7	ENSMUST00000035300.7	455	3	475	0	475	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGGCTTCTCTCTCTC	NA	False	NA	NA	False	AATAAA	-44	NA	140425934	140426682	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_140426161_140426512
ENSMUSG00000038803.8_31063862_31065069_1	chr5	-	448	3	FSM	ENSMUSG00000038803.8	ENSMUST00000132253.5	1144	3	63	633	0	0	multi-exon	FALSE	canonical	3	823	junction_2	132.5	4117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTTGTGGTCCCAAA	NA	False	NA	-5	True	NA	NA	NA	31065069	31063861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31064111_31064742_31064881_31065008
ENSMUSG00000038806.8_180678692_180693938_1	chr1	+	1473	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	0	1740	0	120	multi-exon	FALSE	canonical	3	422	junction_5	43.0761599444003	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGTTCTAACTAGTCTCT	NA	False	NA	NA	False	ACTAAA	-18	NA	180678691	180693938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
ENSMUSG00000038806.8_180678692_180694246_1	chr1	+	1781	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	0	1432	0	428	multi-exon	FALSE	canonical	3	422	junction_5	43.0761599444003	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAGGTTTGTAGACACAG	NA	False	NA	NA	False	AAGAAA	-22	NA	180678691	180694246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
ENSMUSG00000038812.17_6887532_6888396_1	chr19	+	568	4	FSM	ENSMUSG00000038812.17	ENSMUST00000116551.10	985	4	417	0	0	0	multi-exon	FALSE	canonical	3	803	junction_1	23.6971634495683	4403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	9731	False	NA	16	True	ATTAAA	-16	NA	6887531	6888396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6887631_6887730_6887833_6887951_6888042_6888119
ENSMUSG00000038816.15_56810935_56846092_1	chr4	-	3391	18	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_17	49.5178133688317	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	-16	True	NA	-6	True	AATAAA	-21	NA	56846092	56810934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56845963
ENSMUSG00000038816.15_56811490_56814319_1	chr4	-	1304	5	FSM	ENSMUSG00000038816.15	ENSMUST00000131231.2	654	5	0	-650	0	-555	multi-exon	FALSE	canonical	3	19	junction_4	112.62548557054	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGATTTAAACCTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	56814319	56811489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56814169
ENSMUSG00000038816.15_56811490_56846092_1	chr4	-	2836	18	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	0	-555	combination_of_known_junctions	FALSE	canonical	3	86	junction_17	49.5178133688317	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGATTTAAACCTTTT	-16	True	NA	-4	True	AATAAA	-19	NA	56846092	56811489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56845963
ENSMUSG00000038816.15_56826003_56846092_1	chr4	-	1660	10	NIC	ENSMUSG00000038816.15	novel	1956	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_9	65.1103526690753	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGGATTTCCTACTGA	-16	True	NA	NA	False	AATAAA	-18	NA	56846092	56826002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56845963
ENSMUSG00000038828.14_31026977_31034807_1	chr5	+	2772	17	FSM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	1621	1717	0	0	multi-exon	TRUE	canonical	3	358	junction_2	22.5422346662881	321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGCTTTCCTGTCTGA	NA	False	NA	14	True	AATAAA	-14	NA	31026976	31034807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ENSMUSG00000038843.19_17306033_17334031_1	chr19	-	2078	3	FSM	ENSMUSG00000038843.19	ENSMUST00000174236.8	4606	3	0	2528	0	0	multi-exon	FALSE	canonical	3	31	junction_2	7	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATGATTCACCTTGT	8034	False	NA	NA	False	AATAAA	-22	NA	17334031	17306032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_17307853_17310473_17310621_17333920
ENSMUSG00000038845.12_95557836_95570863_1	chr11	+	1010	7	FSM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	53	736	0	329	multi-exon	FALSE	canonical	3	4384	junction_3	774.980806213935	14764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAAGCGAAGCTTTTAT	NA	False	NA	9	True	AATAAA	-25	NA	95557835	95570863	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ENSMUSG00000038845.12_95557836_95570863_2	chr11	+	1004	7	NNC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	0	329	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2157.58865531768	14696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAAGCGAAGCTTTTAT	NA	False	NA	9	True	AATAAA	-25	NA	95557835	95570863	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570525
ENSMUSG00000038871.6_34453142_34482062_1	chr6	+	1734	3	FSM	ENSMUSG00000038871.6	ENSMUST00000045372.6	2220	3	0	486	0	-486	multi-exon	FALSE	canonical	3	82	junction_2	7.5	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCGCAAGGTGCCTCGAG	NA	False	NA	15	True	AATAAA	-20	NA	34453141	34482062	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_34453358_34464224_34464886_34481205
ENSMUSG00000038871.6_34453291_34482062_1	chr6	+	1585	3	FSM	ENSMUSG00000038871.6	ENSMUST00000045372.6	2220	3	149	486	0	-486	multi-exon	FALSE	canonical	3	82	junction_2	7.5	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCGCAAGGTGCCTCGAG	NA	False	NA	15	True	AATAAA	-20	NA	34453290	34482062	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_34453358_34464224_34464886_34481205
ENSMUSG00000038876.13_29189496_29221559_1	chr10	-	1950	6	Fusion	ENSMUSG00000038876.13_ENSMUSG00000110830.2	novel	4402	4	NA	NA	12150	-2048	multi-exon	FALSE	non_canonical	0	0	junction_1	0	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCCCCTCGCTCTGCATT	NA	False	NA	NA	False	NA	NA	NA	29221559	29189495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr10_-_29189730_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
ENSMUSG00000038876.13_29189496_29221947_1	chr10	-	2338	6	Fusion	ENSMUSG00000038876.13_ENSMUSG00000110830.2	novel	4402	4	NA	NA	11762	-2048	multi-exon	FALSE	non_canonical	0	0	junction_1	0	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCCCCTCGCTCTGCATT	NA	False	NA	NA	False	NA	NA	NA	29221947	29189495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr10_-_29189730_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
ENSMUSG00000038876.13_29222172_29238043_1	chr10	-	1928	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	395	2000	0	0	multi-exon	FALSE	canonical	3	77	junction_2	74.5	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAATTTGTTTGAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	29238043	29222171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_29223880_29230287_29230444_29237979
ENSMUSG00000038876.13_29222429_29238043_1	chr10	-	1671	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	395	2257	0	225	multi-exon	FALSE	canonical	3	77	junction_2	74.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGATATCATTATGA	NA	False	NA	-19	True	AATAAA	-16	NA	29238043	29222428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_29223880_29230287_29230444_29237979
ENSMUSG00000038880.14_25114109_25115263_1	chr17	+	894	3	NNC	ENSMUSG00000038880.14	novel	918	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	322.5	1658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	False	NA	16	True	AATAAA	-16	NA	25114108	25115263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_25114463_25114635_25114679_25114766
ENSMUSG00000038880.14_25114109_25115263_2	chr17	+	890	2	NNC	ENSMUSG00000038880.14	novel	918	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	False	NA	16	True	AATAAA	-16	NA	25114108	25115263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_25114463_25114727
ENSMUSG00000038900.18_32851732_32854057_1	chr2	+	630	7	FSM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	161	451	0	0	multi-exon	FALSE	canonical	3	2580	junction_6	1457.06650690885	180149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5802	False	NA	24	True	AATAAA	-23	NA	32851731	32854057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ENSMUSG00000038900.18_32851732_32854057_2	chr2	+	623	7	NNC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2381.32025122386	167070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5802	False	NA	24	True	AATAAA	-23	NA	32851731	32854057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854009
ENSMUSG00000038900.18_32851732_32854057_3	chr2	+	543	6	NIC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_4	2444.52437909709	2508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5802	False	NA	24	True	AATAAA	-23	NA	32851731	32854057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853752_32853866_32854002
ENSMUSG00000038903.14_70058641_70102555_1	chr18	+	1609	12	NNC	ENSMUSG00000038903.14	novel	1618	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	11.9958670568776	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCATGTCCTTCCA	NA	False	NA	3	True	AATAAA	-14	NA	70058640	70102555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_70058692_70063209_70063305_70071912_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
ENSMUSG00000038914.16_180303263_180351855_1	chr2	-	4980	16	NIC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-63	-3506	combination_of_known_junctions	FALSE	canonical	3	75	junction_10	44.2520056042661	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTCAAGACAAAGTAGGG	NA	False	NA	NA	False	NA	NA	NA	180351855	180303262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ENSMUSG00000038930.12_79944227_79965696_2	chr7	-	2651	15	NIC	ENSMUSG00000038930.12	novel	3367	9	NA	NA	3255	-1250	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCGAGCCGTTGGACCC	NA	False	NA	NA	False	NA	NA	NA	79965696	79944226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79963274_79963317_79964861
ENSMUSG00000038930.12_79944227_79965867_2	chr7	-	2822	15	NIC	ENSMUSG00000038930.12	novel	3367	9	NA	NA	3084	-1250	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCGAGCCGTTGGACCC	NA	False	NA	NA	False	NA	NA	NA	79965867	79944226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79963274_79963317_79964861
ENSMUSG00000038930.12_79944227_79966002_1	chr7	-	2957	15	NIC	ENSMUSG00000038930.12	novel	3367	9	NA	NA	2949	-1250	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCGAGCCGTTGGACCC	NA	False	NA	NA	False	NA	NA	NA	79966002	79944226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79963274_79963317_79964861
ENSMUSG00000038930.12_79944227_79966002_2	chr7	-	3025	15	NIC	ENSMUSG00000038930.12	novel	3367	9	NA	NA	2949	-1250	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCGAGCCGTTGGACCC	NA	False	NA	NA	False	NA	NA	NA	79966002	79944226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960920_79961964_79962076_79962779_79962957_79963274_79963317_79964861
ENSMUSG00000038936.14_179495825_179514394_1	chr1	+	1538	12	FSM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	50	360	0	4	multi-exon	FALSE	canonical	3	160	junction_9	16.3434218576322	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATATCTCAGCTGTTTT	NA	False	NA	19	True	ATTAAA	-30	NA	179495824	179514394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
ENSMUSG00000038936.14_179495825_179514754_1	chr1	+	1898	12	FSM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	50	0	0	0	multi-exon	FALSE	canonical	3	160	junction_9	16.3434218576322	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCCCCTTTTTTGGT	NA	False	NA	12	True	AATAAA	-19	NA	179495824	179514754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
ENSMUSG00000038943.17_79944227_79965696_1	chr7	+	2609	14	FSM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	0	303	0	-303	multi-exon	FALSE	canonical	3	387	junction_13	177.415201846273	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTCATTAGGCCCAGTCT	NA	False	NA	NA	False	NA	NA	NA	79944226	79965696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
ENSMUSG00000038943.17_79944227_79965696_2	chr7	+	2686	14	FSM	ENSMUSG00000038943.17	ENSMUST00000163812.9	3026	14	29	311	0	-303	multi-exon	FALSE	canonical	3	144	junction_13	239.092317096712	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTCATTAGGCCCAGTCT	NA	False	NA	NA	False	NA	NA	NA	79944226	79965696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79964861
ENSMUSG00000038943.17_79944227_79965696_3	chr7	+	2728	15	FSM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	-26	306	0	-303	multi-exon	FALSE	canonical	3	316	junction_13	238.868890688544	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTCATTAGGCCCAGTCT	NA	False	NA	NA	False	NA	NA	NA	79944226	79965696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
ENSMUSG00000038943.17_79944227_79965867_1	chr7	+	2899	15	FSM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	-26	135	0	-132	multi-exon	FALSE	canonical	3	316	junction_13	238.868890688544	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATATTTATTCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	79944226	79965867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
ENSMUSG00000038943.17_79944227_79965867_2	chr7	+	2780	14	FSM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	0	132	0	-132	multi-exon	FALSE	canonical	3	387	junction_13	177.415201846273	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATATTTATTCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	79944226	79965867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
ENSMUSG00000038943.17_79944227_79965867_3	chr7	+	2857	14	FSM	ENSMUSG00000038943.17	ENSMUST00000163812.9	3026	14	29	140	0	-132	multi-exon	FALSE	canonical	3	144	junction_13	239.092317096712	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATATTTATTCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	79944226	79965867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79964861
ENSMUSG00000038943.17_79944227_79966002_1	chr7	+	729	6	NNC	ENSMUSG00000038943.17	novel	2912	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	417.183412901328	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACACTGTTTTGTCTTC	NA	False	NA	13	True	AATAAA	-23	NA	79944226	79966002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954494_79965941
ENSMUSG00000038954.15_45088212_45430177_1	chr17	+	1335	12	FSM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	173	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	13.7774519348892	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGAGTGGCCTGCTTTGTTT	NA	False	NA	26	True	AATAAA	-27	NA	45088211	45430177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352274_45359168_45359280_45430029
ENSMUSG00000038957.14_57615850_57657446_1	chr9	+	3025	6	FSM	ENSMUSG00000038957.14	ENSMUST00000137245.8	4277	6	12	1240	0	-1240	multi-exon	FALSE	canonical	3	26	junction_2	95.7613700820952	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTAGAGTGAAGTG	NA	False	NA	16	True	AATAAA	-26	NA	57615849	57657446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_57615983_57620663_57620845_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ENSMUSG00000038957.14_57657995_57672397_1	chr9	+	1784	13	NNC	ENSMUSG00000038957.14	novel	5708	7	NA	NA	42145	12615	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGAGCGCCTCTTCCGCTT	5264	False	NA	NA	False	NA	NA	NA	57657994	57672397	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672319
ENSMUSG00000038965.18_16970840_17019337_1	chr16	-	1629	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	19	961	0	-658	multi-exon	FALSE	canonical	3	1494	junction_3	290.114153777823	2916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTCTGTCAAGATTTGA	NA	False	NA	-19	True	AATAAA	-27	NA	17019337	16970839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
ENSMUSG00000038965.18_16971789_17019337_1	chr16	-	680	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	19	1910	0	0	multi-exon	FALSE	canonical	3	1494	junction_3	290.114153777823	2331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGCTTGCTTTGTTTTA	NA	False	NA	-19	True	ATTAAA	-17	NA	17019337	16971788	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
ENSMUSG00000038975.15_153612926_153617842_1	chr3	-	1560	9	FSM	ENSMUSG00000065463.3_ENSMUSG00000038975.15	ENSMUST00000196266.5	1271	9	-124	-165	-1	0	multi-exon	FALSE	canonical	3	426	junction_3	203.564140690348	1500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6904	False	NA	-2	True	AATAAA	-15	NA	153617842	153612925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
ENSMUSG00000038975.15_153612926_153618592_1	chr3	-	1425	10	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	217.717962306997	1972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6154	False	NA	-2	True	AATAAA	-15	NA	153618592	153612925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ENSMUSG00000038975.15_153612926_153618592_2	chr3	-	1311	9	NIC	ENSMUSG00000038975.15	novel	1381	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	355	junction_5	287.890359989702	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6154	False	NA	-2	True	AATAAA	-15	NA	153618592	153612925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ENSMUSG00000038975.15_153612926_153618592_3	chr3	-	1409	10	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	240.631627694519	1478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6154	False	NA	-2	True	AATAAA	-15	NA	153618592	153612925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ENSMUSG00000038975.15_153612926_153618592_4	chr3	-	1347	9	NIC	ENSMUSG00000038975.15	novel	1381	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_8	331.806584285183	2058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6154	False	NA	-2	True	AATAAA	-15	NA	153618592	153612925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618550
ENSMUSG00000038975.15_153612926_153618592_5	chr3	-	1445	10	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_9	287.574145028528	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6154	False	NA	-2	True	AATAAA	-15	NA	153618592	153612925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618550
ENSMUSG00000038975.15_153613091_153617842_1	chr3	-	1395	9	FSM	ENSMUSG00000065463.3_ENSMUSG00000038975.15	ENSMUST00000196266.5	1271	9	-124	0	-1	0	multi-exon	FALSE	canonical	3	426	junction_3	203.564140690348	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAGTCTTCTGAGTCCA	6904	False	NA	-29	True	AATAAA	-16	NA	153617842	153613090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
ENSMUSG00000038975.15_153613091_153618592_1	chr3	-	1162	9	FSM	ENSMUSG00000038975.15	ENSMUST00000089950.11	1381	9	54	165	0	0	multi-exon	FALSE	canonical	3	355	junction_5	268.62508724987	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAGTCTTCTGAGTCCA	6154	False	NA	-29	True	AATAAA	-16	NA	153618592	153613090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ENSMUSG00000038975.15_153613091_153618592_2	chr3	-	1244	10	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	240.631627694519	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAGTCTTCTGAGTCCA	6154	False	NA	-29	True	AATAAA	-16	NA	153618592	153613090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ENSMUSG00000038975.15_153613091_153618592_3	chr3	-	1260	10	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	217.717962306997	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAGTCTTCTGAGTCCA	6154	False	NA	-29	True	AATAAA	-16	NA	153618592	153613090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ENSMUSG00000038975.15_153617247_153618592_1	chr3	-	445	2	ISM	ENSMUSG00000038975.15	ENSMUST00000198094.2	631	7	0	2196	0	376	5prime_fragment	FALSE	canonical	3	357	junction_1	0	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGTTTTACCTAAACT	6154	False	NA	NA	False	NA	NA	NA	153618592	153617246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_153617670_153618570
ENSMUSG00000038982.11_38786677_38819040_1	chr13	-	1729	5	FSM	ENSMUSG00000038982.11	ENSMUST00000035899.8	5634	5	45	3860	-3	-3860	multi-exon	FALSE	canonical	3	63	junction_3	8.98262211161084	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATTTGAGATTTCTTT	NA	False	NA	-23	True	ATTAAA	-20	NA	38819040	38786676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_38788005_38796618_38796678_38803065_38803196_38814968_38815052_38818911
ENSMUSG00000038987.9_32665828_32667609_1	chr2	-	922	5	NIC	ENSMUSG00000038987.9	novel	1730	9	NA	NA	1549	1565	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGGACTTCAACGTGCCG	NA	False	NA	NA	False	ACTAAA	-3	NA	32667609	32665827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_32665908_32666315_32666536_32666718_32666819_32666994_32667041_32667133
ENSMUSG00000039018.16_139717562_139730528_1	chr7	+	1339	11	FSM	ENSMUSG00000039018.16	ENSMUST00000036977.9	1595	11	85	171	0	168	multi-exon	FALSE	canonical	3	445	junction_3	26.942345851837	2117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTGGCTTCTCTTA	NA	False	NA	30	True	AATAAA	-31	NA	139717561	139730528	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_139717687_139718231_139718297_139720108_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ENSMUSG00000039018.16_139717562_139730528_2	chr7	+	1335	11	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	0	168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	150.393783116191	1539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTGGCTTCTCTTA	NA	False	NA	30	True	AATAAA	-31	NA	139717561	139730528	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_139717687_139718231_139718290_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ENSMUSG00000039018.16_139717562_139730528_4	chr7	+	1333	11	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	0	168	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	149.424228289792	1374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTGGCTTCTCTTA	NA	False	NA	30	True	AATAAA	-31	NA	139717561	139730528	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_139717687_139718231_139718297_139720108_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725916_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ENSMUSG00000039021.16_32647303_32652256_1	chr2	-	1393	5	NIC	ENSMUSG00000039021.16	novel	2388	15	NA	NA	13086	-265	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGATTTCGGTCAGAGGC	NA	False	NA	NA	False	NA	NA	NA	32652256	32647302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_32647463_32648768_32648949_32649538_32649715_32650600_32650729_32651507
ENSMUSG00000039033.12_139818137_139908705_1	chr2	-	2165	8	ISM	ENSMUSG00000039033.12	ENSMUST00000099304.4	2127	13	0	142737	0	315	5prime_fragment	FALSE	canonical	3	57	junction_2	18.1186565254081	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTATTTTCTCAGTATGT	NA	False	NA	NA	False	AATAAA	-17	NA	139908705	139818136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ENSMUSG00000039041.16_179813399_179818077_1	chr2	+	1412	10	FSM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	121	2	0	0	multi-exon	FALSE	canonical	3	1931	junction_6	170.679108342794	2037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATGGTCTGGGCCTGTG	NA	False	NA	0	True	AATAAA	-20	NA	179813398	179818077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ENSMUSG00000039041.16_179813399_179818077_2	chr2	+	1510	9	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1931	junction_6	165.514349831064	1947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATGGTCTGGGCCTGTG	NA	False	NA	0	True	AATAAA	-20	NA	179813398	179818077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817750_179817866
ENSMUSG00000039048.16_35115504_35122242_1	chr9	-	2180	11	FSM	ENSMUSG00000039048.16	ENSMUST00000127996.8	2289	11	109	0	0	0	multi-exon	FALSE	canonical	3	179	junction_9	18.9747200242849	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122242	35115503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
ENSMUSG00000039048.16_35115504_35122242_2	chr9	-	2066	10	NIC	ENSMUSG00000039048.16	novel	2289	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	66.2654594122089	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122242	35115503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35121240_35121462_35122102
ENSMUSG00000039055.5_94544602_94550915_1	chr11	-	826	4	NIC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-6125	-3200	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	3274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGTCTGCTTCCGCTAC	NA	False	NA	NA	False	NA	NA	NA	94550915	94544601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_94544668_94547233_94547445_94547808_94547877_94550434
ENSMUSG00000039055.5_94544602_94550915_2	chr11	-	741	4	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-6125	-3200	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGTCTGCTTCCGCTAC	NA	False	NA	NA	False	NA	NA	NA	94550915	94544601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_94544668_94547318_94547445_94547808_94547877_94550434
ENSMUSG00000039065.12_31602264_31617681_1	chr15	+	697	2	FSM	ENSMUSG00000039065.12	ENSMUST00000160146.2	4655	2	266	3692	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACCGTGACAAGGAGTG	115	False	NA	27	True	ATTAAA	-27	NA	31602263	31617681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_31602296_31617016
ENSMUSG00000039067.6_108307470_108315090_1	chr8	-	1118	7	FSM	ENSMUSG00000039067.6	ENSMUST00000044106.6	1581	7	6	457	0	-457	multi-exon	FALSE	canonical	3	2367	junction_5	170.70409745782	2221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGTGTGCCACTAGGAGG	NA	False	NA	0	True	ATTAAA	-16	NA	108315090	108307469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ENSMUSG00000039067.6_108307573_108315090_1	chr8	-	1015	7	FSM	ENSMUSG00000039067.6	ENSMUST00000044106.6	1581	7	6	560	0	-560	multi-exon	FALSE	canonical	3	2367	junction_5	170.70409745782	1797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAAGGAGAAGAGCGA	NA	False	NA	0	True	NA	NA	NA	108315090	108307572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ENSMUSG00000039099.8_79422093_79435698_1	chr7	+	1039	6	ISM	ENSMUSG00000039099.8	ENSMUST00000035622.8	2285	18	29182	0	29182	0	3prime_fragment	FALSE	canonical	3	7	junction_2	3.6	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGCGGTTCATCCTT	NA	False	NA	1	True	AATAAA	-16	NA	79422092	79435698	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_79422269_79423100_79423315_79425259_79425324_79426377_79426535_79426860_79427054_79435463
ENSMUSG00000039105.7_63463009_63468464_1	chr4	+	612	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	0	523	0	-523	multi-exon	FALSE	canonical	3	4249	junction_2	22.5	8826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGTAGGACCCTTCA	NA	False	NA	33	True	ATTAAA	-12	NA	63463008	63468464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_63463237_63466821_63466923_63468181
ENSMUSG00000039105.7_63463009_63468521_1	chr4	+	669	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	0	466	0	-466	multi-exon	FALSE	canonical	3	4249	junction_2	22.5	8972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTATGTACCTGAAGTTT	NA	False	NA	90	True	NA	NA	NA	63463008	63468521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_63463237_63466821_63466923_63468181
ENSMUSG00000039128.14_5799476_5849662_1	chr2	-	1141	12	NNC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	320.522971417981	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCCTACTGTGATGG	NA	False	NA	-7	True	AATAAA	-15	NA	5849662	5799475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_5799692_5800359_5800498_5803171_5803301_5809694_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ENSMUSG00000039128.14_5799476_5849772_1	chr2	-	1253	13	FSM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	203	371	-20	0	multi-exon	FALSE	canonical	3	980	junction_5	82.7531050105607	2495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCCTACTGTGATGG	NA	False	NA	-7	True	AATAAA	-15	NA	5849772	5799475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ENSMUSG00000039128.14_5799476_5849772_2	chr2	-	1248	13	NNC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_1	297.205912065468	2232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCCTACTGTGATGG	NA	False	NA	-7	True	AATAAA	-15	NA	5849772	5799475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_5799687_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ENSMUSG00000039128.14_5799476_5849772_3	chr2	-	1251	12	NNC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	320.522971417981	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCCTACTGTGATGG	NA	False	NA	-7	True	AATAAA	-15	NA	5849772	5799475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_5799692_5800359_5800498_5803171_5803301_5809694_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ENSMUSG00000039128.14_5799476_5849772_4	chr2	-	1220	12	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	91	junction_9	296.801433468727	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCCTACTGTGATGG	NA	False	NA	-7	True	AATAAA	-15	NA	5849772	5799475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5838466_5838525_5846763_5846836_5849645
ENSMUSG00000039128.14_5799476_5849772_5	chr2	-	1247	12	NNC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	321.946943937575	1197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCCTACTGTGATGG	NA	False	NA	-7	True	AATAAA	-15	NA	5849772	5799475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5838439_5838525_5846763_5846836_5849645
ENSMUSG00000039128.14_5799476_5849772_6	chr2	-	1241	12	NNC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	321.946943937575	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCCTACTGTGATGG	NA	False	NA	-7	True	AATAAA	-15	NA	5849772	5799475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5838445_5838525_5846763_5846836_5849645
ENSMUSG00000039130.19_30366379_30391009_1	chr6	-	1812	10	NNC	ENSMUSG00000039130.19	novel	1824	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	332.681176852702	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCTAGAGAATTGTTTT	4	True	NA	-7	True	AATAAA	-18	NA	30391009	30366378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_30366745_30370263_30370471_30372736_30372950_30373241_30373483_30374763_30374919_30375937_30376066_30381779_30381864_30382535_30382671_30387402_30387532_30390855
ENSMUSG00000039130.19_30366379_30391009_2	chr6	-	1813	10	NNC	ENSMUSG00000039130.19	novel	1824	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	426.035470615091	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCTAGAGAATTGTTTT	4	True	NA	-7	True	AATAAA	-18	NA	30391009	30366378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_30366745_30370263_30370471_30372736_30372950_30373241_30373483_30374763_30374919_30375937_30376066_30381779_30381859_30382531_30382690_30387419_30387532_30390855
ENSMUSG00000039131.16_151799519_151871595_1	chr3	-	1281	6	FSM	ENSMUSG00000039131.16	ENSMUST00000046614.10	1596	6	272	43	-208	0	multi-exon	FALSE	canonical	3	17	junction_3	6.40624695121879	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACCCACGGCTCTTTCC	NA	False	NA	NA	False	TTTAAA	-44	NA	151871595	151799518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_151799933_151808255_151808338_151813577_151813685_151833672_151833854_151843209_151843396_151871284
ENSMUSG00000039148.6_5430087_5432800_1	chr19	-	947	9	ISM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	5931	2536	474	0	3prime_fragment	FALSE	canonical	3	368	junction_1	60.7654301391836	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	NA	False	NA	-8	True	AATAAA	-19	NA	5432800	5430086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742
ENSMUSG00000039157.13_32455756_32459762_1	chr2	+	2609	4	ISM	ENSMUSG00000039157.13	ENSMUST00000048375.6	4223	11	30385	6	25554	0	3prime_fragment	FALSE	canonical	3	116	junction_1	15.1730755689881	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTTTTGTTGGTGTTT	3443	False	NA	17	True	ATTAAA	-17	NA	32455755	32459762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_32455817_32456280_32456403_32456499_32456570_32457406
ENSMUSG00000039163.11_117893590_117979129_1	chr9	-	1053	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	116	0	102	0	multi-exon	TRUE	canonical	3	173	junction_1	9.03081145609604	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGAAGGCAAGATTTAAC	NA	False	NA	NA	False	ATTAAA	-17	NA	117979129	117893589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
ENSMUSG00000039163.11_117894163_117979129_1	chr9	-	480	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	116	573	102	0	multi-exon	FALSE	canonical	3	173	junction_1	9.03081145609604	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGAGTTCTGATTTAT	NA	False	NA	-7	True	AATAAA	-13	NA	117979129	117894162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
ENSMUSG00000039163.11_117894163_117979129_2	chr9	-	475	4	NNC	ENSMUSG00000039163.11	novel	1169	4	NA	NA	102	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	86.2644512853096	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGAGTTCTGATTTAT	NA	False	NA	-7	True	AATAAA	-13	NA	117979129	117894162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_117894417_117904189_117904281_117944407_117944493_117979084
ENSMUSG00000039163.11_117894163_117979231_1	chr9	-	582	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	14	573	0	0	multi-exon	FALSE	canonical	3	173	junction_1	9.03081145609604	1539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGAGTTCTGATTTAT	NA	False	NA	-7	True	AATAAA	-13	NA	117979231	117894162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
ENSMUSG00000039178.10_53966990_54060877_1	chr5	+	1822	21	FSM	ENSMUSG00000039178.10	ENSMUST00000037337.10	2273	21	21	430	0	-203	multi-exon	FALSE	canonical	3	62	junction_3	8.96994983263563	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGAAGTTTTCACTTTT	NA	False	NA	11	True	AATAAA	-25	NA	53966989	54060877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ENSMUSG00000039178.10_53966990_54061080_1	chr5	+	2025	21	FSM	ENSMUSG00000039178.10	ENSMUST00000037337.10	2273	21	21	227	0	0	multi-exon	FALSE	canonical	3	62	junction_3	8.96994983263563	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTTGTCAGTTTGTAAA	NA	False	NA	8	True	AATAAA	-18	NA	53966989	54061080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ENSMUSG00000039179.14_10175812_10213156_1	chr16	-	1605	7	FSM	ENSMUSG00000039179.14	ENSMUST00000043415.13	1803	7	198	0	156	0	multi-exon	FALSE	canonical	2	3	junction_5	2.40947204913349	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTTTAGGAAAATGTGAA	NA	False	NA	4	True	AATAAA	-22	NA	10213156	10175811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_10176300_10179121_10179277_10196760_10196984_10200653_10200798_10203926_10203998_10205018_10205103_10212716
ENSMUSG00000039182.7_14804862_14812788_1	chr13	+	1912	2	FSM	ENSMUSG00000039182.7	ENSMUST00000178289.3	2035	2	123	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCCTGTTTTTCATTGT	NA	False	NA	10	True	ATTAAA	-17	NA	14804861	14812788	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_14804870_14810884
ENSMUSG00000039182.7_14804862_14812788_2	chr13	+	1992	2	FSM	ENSMUSG00000039182.7	ENSMUST00000038690.6	2914	2	29	893	0	0	multi-exon	FALSE	canonical	3	129	junction_1	0	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCCTGTTTTTCATTGT	NA	False	NA	10	True	ATTAAA	-17	NA	14804861	14812788	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_14804950_14810884
ENSMUSG00000039183.7_25101593_25105307_1	chr17	-	1422	7	FSM	ENSMUSG00000039183.7	ENSMUST00000235055.2	950	7	5	-477	0	0	multi-exon	FALSE	canonical	3	41	junction_5	246.619646419339	1587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105307	25101592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104609_25104692_25104812_25105252
ENSMUSG00000039191.13_53713176_53813371_1	chr5	+	3923	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	0	1329	0	-108	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTCCTACCACAGA	NA	False	NA	13	True	AATAAA	-21	NA	53713175	53813371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039191.13_53713176_53813487_1	chr5	+	4039	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	0	1213	0	8	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTTCAATATATGATGT	NA	False	NA	14	True	ATTAAA	-25	NA	53713175	53813487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039191.13_53747710_53813487_1	chr5	+	4088	11	FSM	ENSMUSG00000039191.13	ENSMUST00000037618.13	5459	11	154	1217	0	8	multi-exon	FALSE	canonical	3	36	junction_1	139.803576492163	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTTCAATATATGATGT	NA	False	NA	14	True	ATTAAA	-25	NA	53747709	53813487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_53747829_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039193.10_74733250_74740900_1	chr17	-	1051	2	ISM	ENSMUSG00000039193.10	ENSMUST00000234086.2	3154	8	14301	-573	14301	562	3prime_fragment	FALSE	canonical	2	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATATGTTCTCACATGA	NA	False	NA	NA	False	ATTAAA	-16	NA	74740900	74733249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_74734130_74740729
ENSMUSG00000039194.17_79024618_79036469_1	chr7	-	1815	9	FSM	ENSMUSG00000039194.17	ENSMUST00000179243.3	2142	9	327	0	-116	0	multi-exon	FALSE	canonical	3	11	junction_8	4.45638586749397	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTTTCATGATGAACTT	NA	False	NA	-15	True	AATAAA	-22	NA	79036469	79024617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_79025467_79025644_79025756_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033711_79034406_79034528_79036436
ENSMUSG00000039195.5_32253073_32268311_1	chr2	-	2698	16	NIC	ENSMUSG00000039195.5	novel	2618	2	NA	NA	3563	14036	intron_retention	FALSE	non_canonical	0	0	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACACTCCGAAGGCCCAG	NA	False	NA	NA	False	NA	NA	NA	32268311	32253072	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ENSMUSG00000039197.11_21102679_21369108_1	chr14	+	1214	8	NNC	ENSMUSG00000039197.11	novel	1782	11	NA	NA	0	-622	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	132.803675877329	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACTAATCATTGACTGAT	NA	False	NA	NA	False	NA	NA	NA	21102678	21369108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21368645
ENSMUSG00000039197.11_21102685_21368783_1	chr14	+	883	8	NNC	ENSMUSG00000039197.11	novel	2224	7	NA	NA	0	-947	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	132.803675877329	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTATTTTACTGAGGTA	NA	False	NA	NA	False	AATAAA	-23	NA	21102684	21368783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21368645
ENSMUSG00000039200.17_10010811_10031862_2	chr16	+	1007	7	NNC	ENSMUSG00000039200.17	novel	2166	6	NA	NA	0	-233	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	44.8803966114383	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTCGTGTTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	10010810	10031862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10031603
ENSMUSG00000039205.17_32253073_32268311_1	chr2	+	2770	17	NIC	ENSMUSG00000039205.17	novel	2666	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	33	junction_3	18.9699598049126	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCCCCACCAGCACTG	NA	False	NA	8	True	AATAAA	-19	NA	32253072	32268311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ENSMUSG00000039206.14_143450339_143489931_1	chr5	+	2885	15	FSM	ENSMUSG00000039206.14	ENSMUST00000045593.12	4651	15	0	1766	0	-1766	multi-exon	FALSE	canonical	3	16	junction_4	5.5272977491866	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTTGGTATACCATCAAA	NA	False	NA	NA	False	AATAAA	-9	NA	143450338	143489931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_143450532_143452707_143452860_143458701_143458874_143460367_143460627_143464168_143464292_143467384_143467513_143469980_143470108_143472902_143472987_143475681_143475760_143479912_143479994_143480296_143480425_143486724_143486794_143486879_143486953_143488616_143488865_143488961
ENSMUSG00000039209.13_9988090_9992494_1	chr16	+	616	2	NIC	ENSMUSG00000039209.13	novel	550	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	497	junction_1	0	3995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTCTGTGTTACAACTT	NA	False	NA	29	True	AATAAA	-29	NA	9988089	9992494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_9988356_9992144
ENSMUSG00000039209.13_9988090_9992494_2	chr16	+	514	3	NNC	ENSMUSG00000039209.13	novel	550	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	248.5	3995	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTCTGTGTTACAACTT	NA	False	NA	29	True	AATAAA	-29	NA	9988089	9992494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_9988189_9988290_9988356_9992144
ENSMUSG00000039210.17_186947719_187036583_1	chr1	+	1254	6	ISM	ENSMUSG00000039210.17	ENSMUST00000160481.8	2880	11	11	45254	0	-657	5prime_fragment	FALSE	canonical	3	75	junction_2	5.88557558782486	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGCCATGAGTGAGTGCT	NA	False	NA	NA	False	NA	NA	NA	186947718	187036583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526
ENSMUSG00000039218.18_24038282_24041646_1	chr17	+	2643	2	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	16087	2069	0	12	internal_fragment	FALSE	canonical	3	161	junction_1	0	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAAGCCACCCCCTGGC	39	False	NA	NA	False	NA	NA	NA	24038281	24041646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_24040665_24041386
ENSMUSG00000039218.18_24040544_24043715_1	chr17	+	1154	5	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	18349	0	183	0	3prime_fragment	FALSE	canonical	3	160	junction_2	14.3069039278245	714	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTGTAGTCTTTACTT	2301	False	NA	16	True	AATAAA	-18	NA	24040543	24043715	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
ENSMUSG00000039218.18_24041619_24043715_1	chr17	+	1891	3	FSM	ENSMUSG00000092981.3_ENSMUSG00000039218.18	ENSMUST00000190568.2	597	3	-880	-414	-646	0	multi-exon	FALSE	canonical	3	162	junction_1	16	570	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTGTAGTCTTTACTT	3376	False	NA	16	True	AATAAA	-18	NA	24041618	24043715	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24042879_24042989_24043095_24043189
ENSMUSG00000039218.18_24043714_24048126_1	chr17	+	521	4	NIC	ENSMUSG00000039218.18	novel	8564	14	NA	NA	1215	4411	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	13609	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGACCCAGCGTGCTCTGCG	5471	False	NA	NA	False	NA	NA	NA	24043713	24048126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_24043954_24046441_24046548_24047817_24047923_24048056
ENSMUSG00000039218.18_24043714_24048126_2	chr17	+	546	4	NNC	ENSMUSG00000039218.18	novel	8564	14	NA	NA	1215	4411	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	41938	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGACCCAGCGTGCTCTGCG	5471	False	NA	NA	False	NA	NA	NA	24043713	24048126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_24043954_24046441_24046548_24047817_24047953_24048061
ENSMUSG00000039219.19_14227211_14237998_1	chr13	+	2202	4	NIC	ENSMUSG00000039219.19	novel	571	5	NA	NA	-10606	-56806	intron_retention	TRUE	non_canonical	0	0	junction_1	0	5460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGGCGTCGTATGCCAC	NA	False	NA	NA	False	AAGAAA	-22	NA	14227210	14237998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_14229041_14229734_14229806_14232380_14232474_14237790
ENSMUSG00000039219.19_14228263_14237998_2	chr13	+	1285	5	NIC	ENSMUSG00000039219.19	novel	571	5	NA	NA	-9554	-56806	intron_retention	FALSE	non_canonical	0	0	junction_1	0	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGGCGTCGTATGCCAC	NA	False	NA	NA	False	AAGAAA	-22	NA	14228262	14237998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_14229041_14229734_14229806_14232380_14232474_14233903_14234039_14237790
ENSMUSG00000039219.19_14228263_14237998_3	chr13	+	1150	4	NIC	ENSMUSG00000039219.19	novel	571	5	NA	NA	-9554	-56806	intron_retention	FALSE	non_canonical	0	0	junction_1	0	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGGCGTCGTATGCCAC	NA	False	NA	NA	False	AAGAAA	-22	NA	14228262	14237998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_14229041_14229734_14229806_14232380_14232474_14237790
ENSMUSG00000039219.19_14228976_14237998_1	chr13	+	437	4	NIC	ENSMUSG00000039219.19	novel	571	5	NA	NA	-8841	-56806	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGGCGTCGTATGCCAC	NA	False	NA	NA	False	AAGAAA	-22	NA	14228975	14237998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_14229041_14229734_14229806_14232380_14232474_14237790
ENSMUSG00000039220.17_36241642_36243175_1	chr17	+	1277	2	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	13554	-2	4256	0	3prime_fragment	FALSE	canonical	3	165	junction_1	0	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTATGTTTCACTTC	NA	False	NA	28	True	AATAAA	-28	NA	36241641	36243175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_36241784_36242040
ENSMUSG00000039230.15_121507593_121563979_2	chr11	+	2294	13	NIC	ENSMUSG00000039230.15	novel	1292	11	NA	NA	15062	55989	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCGCTAGGGACTTACGG	NA	False	NA	NA	False	NA	NA	NA	121507592	121563979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ENSMUSG00000039231.19_7927674_7940858_1	chrX	-	2711	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115638.10	3116	6	141	264	2	0	multi-exon	FALSE	canonical	3	87	junction_5	11.3947356265953	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTGAGATTTGGGAG	6994	False	NA	NA	False	NA	NA	NA	7940858	7927673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940782
ENSMUSG00000039242.11_14129210_14172086_1	chr13	+	2163	12	FSM	ENSMUSG00000039242.11	ENSMUST00000099747.5	3892	12	156	1573	0	0	multi-exon	TRUE	canonical	3	178	junction_5	19.409889274617	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATCATGTTTTCTTTTA	NA	False	NA	NA	False	ACTAAA	-37	NA	14129209	14172086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
ENSMUSG00000039242.11_14129210_14173659_1	chr13	+	3736	12	FSM	ENSMUSG00000039242.11	ENSMUST00000099747.5	3892	12	156	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	19.409889274617	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	14129209	14173659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
ENSMUSG00000039246.9_185820077_185849485_1	chr1	-	1237	4	FSM	ENSMUSG00000039246.9	ENSMUST00000195481.2	584	4	0	-653	0	-149	multi-exon	FALSE	canonical	3	17	junction_2	56.8174464598878	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTGACTTTCAGATTTA	NA	False	NA	-11	True	AATAAA	-15	NA	185849485	185820076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_185820966_185821640_185821757_185846460_185846561_185849353
ENSMUSG00000039254.17_32145014_32150087_1	chr2	+	1921	7	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	3729	5070	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCTGTGCGCATCGCTT	NA	False	NA	NA	False	NA	NA	NA	32145013	32150087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
ENSMUSG00000039263.17_173952142_173964495_1	chr2	+	2099	12	FSM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	0	368	0	0	multi-exon	FALSE	canonical	3	214	junction_9	24.2330284822489	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	173952141	173964495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962740_173962918_173963271_173963383_173963883
ENSMUSG00000039263.17_173962648_173964495_1	chr2	+	993	3	ISM	ENSMUSG00000039263.17	ENSMUST00000153957.8	2052	10	9675	0	9282	0	3prime_fragment	FALSE	canonical	3	269	junction_2	7.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	173962647	173964495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_173962918_173963271_173963383_173963883
ENSMUSG00000039275.10_121189625_121199501_1	chr11	+	2175	3	ISM	ENSMUSG00000039275.10	ENSMUST00000106113.2	5029	9	38809	1221	283	-1221	3prime_fragment	FALSE	canonical	3	175	junction_2	33	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGAGTGAGAACATGTGTG	NA	False	NA	7	True	AATAAA	-13	NA	121189624	121199501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_121189682_121190409_121190620_121197593
ENSMUSG00000039285.13_117869755_117892643_1	chr9	+	2944	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	188	264	0	-264	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATTGGATGTGAAATAC	9773	False	NA	NA	False	ATTAAA	-20	NA	117869754	117892643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ENSMUSG00000039294.15_121113414_121120135_1	chr11	-	2397	7	NIC	ENSMUSG00000039294.15	novel	2417	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	17.7709188157381	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTTTCTGTTTTCTGC	NA	False	NA	0	True	AATAAA	-22	NA	121120135	121113413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121119884
ENSMUSG00000039318.13_185018898_185034983_1	chr1	+	1629	10	NIC	ENSMUSG00000039318.13	novel	1981	12	NA	NA	8903	16027	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGGCCACCAGCCTGAG	NA	False	NA	NA	False	NA	NA	NA	185018897	185034983	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904
ENSMUSG00000039329.9_121036983_121037809_1	chr11	+	395	3	FSM	ENSMUSG00000039329.9	ENSMUST00000039088.9	1745	3	14	1336	0	116	multi-exon	FALSE	canonical	3	732	junction_1	1	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAGGAAGAGGAAGAGGAA	NA	False	NA	5	True	AATAAA	-29	NA	121036982	121037809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_121037049_121037353_121037428_121037554
ENSMUSG00000039337.4_121007041_121009083_1	chr11	-	1626	3	FSM	ENSMUSG00000039337.4	ENSMUST00000039146.4	2046	3	420	0	420	0	multi-exon	FALSE	canonical	3	61	junction_1	13.5	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTGCAGTCTCCTCAT	NA	False	NA	0	True	AATAAA	-19	NA	121009083	121007040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_121008523_121008652_121008727_121009013
ENSMUSG00000039345.17_8288655_8308065_1	chr16	+	1149	10	NNC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	71.3963031169362	235	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCCTTGAGATGCTGT	NA	False	NA	8	True	AATAAA	-17	NA	8288654	8308065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_8288730_8291694_8291831_8295979_8296194_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
ENSMUSG00000039345.17_8288655_8308065_2	chr16	+	1190	11	NNC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	56.14410031339	566	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCCTTGAGATGCTGT	NA	False	NA	8	True	AATAAA	-17	NA	8288654	8308065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_8288730_8291694_8291831_8295979_8296194_8299990_8300032_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
ENSMUSG00000039345.17_8288655_8308065_3	chr16	+	1298	10	NIC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	0	5	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	49.6680337868021	980	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCCTTGAGATGCTGT	NA	False	NA	8	True	AATAAA	-17	NA	8288654	8308065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_8288730_8291694_8291831_8295830_8296194_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
ENSMUSG00000039356.16_31560746_31570992_1	chr2	+	1298	9	FSM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	19	369	0	0	multi-exon	FALSE	canonical	3	842	junction_6	46.6797600679352	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAGAAAACCAAAGA	NA	False	NA	-20	True	NA	NA	NA	31560745	31570992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
ENSMUSG00000039356.16_31560746_31571591_1	chr2	+	1897	9	FSM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	19	-230	0	230	multi-exon	FALSE	canonical	3	842	junction_6	46.6797600679352	79353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGTTTCTGATGCTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	31560745	31571591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
ENSMUSG00000039382.13_7588212_7594427_1	chrX	+	1687	11	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	64.5585780512551	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGACTTGACCTCAAGG	3762	False	NA	4	True	AATAAA	-17	NA	7588211	7594427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_7588470_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ENSMUSG00000039382.13_7588487_7594246_2	chrX	+	1379	11	FSM	ENSMUSG00000039382.13	ENSMUST00000043045.10	1609	11	31	199	0	2	multi-exon	FALSE	canonical	3	94	junction_1	40.4807361593141	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTTTGTGACTGGAGT	4037	False	NA	15	True	AATAAA	-17	NA	7588486	7594246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ENSMUSG00000039382.13_7588596_7594427_1	chrX	+	1451	11	FSM	ENSMUSG00000039382.13	ENSMUST00000043045.10	1609	11	140	18	0	6	multi-exon	FALSE	canonical	3	94	junction_1	40.4807361593141	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGACTTGACCTCAAGG	4146	False	NA	4	True	AATAAA	-17	NA	7588595	7594427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ENSMUSG00000039395.9_72198392_72231254_1	chr1	-	2095	4	ISM	ENSMUSG00000039395.9	ENSMUST00000048860.9	2284	5	20212	-209	20212	209	3prime_fragment	FALSE	canonical	3	578	junction_1	33.5360502544153	739	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGTGTGTGTTATATTT	5114	False	NA	-4	True	ATTAAA	-23	NA	72231254	72198391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201
ENSMUSG00000039414.11_79115856_79142795_1	chr17	-	2682	18	ISM	ENSMUSG00000039414.11	ENSMUST00000232947.2	4345	27	-6	24084	-2	3468	5prime_fragment	TRUE	canonical	3	55	junction_5	9.88025187748925	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACGGTGTGCGGCAGGG	NA	False	NA	NA	False	NA	NA	NA	79142795	79115855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
ENSMUSG00000039427.15_5062016_5073820_1	chr16	+	2119	8	Fusion	ENSMUSG00000039427.15_ENSMUSG00000087168.2	novel	1669	12	NA	NA	4078	11044	multi-exon	FALSE	non_canonical	0	0	junction_1	0	842	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGAAACGGGCGGAAGC	NA	False	NA	NA	False	NA	NA	NA	5062015	5073820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr16_+_5063250_5065340_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ENSMUSG00000039428.12_88789235_88987968_1	chr7	-	3360	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	27	313	0	-313	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCATTTCTGTGAGAGAT	NA	False	NA	-5	True	AGTAAA	-18	NA	88987968	88789234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ENSMUSG00000039428.12_88789415_88987968_1	chr7	-	3180	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	27	493	0	-493	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTACCTGGACCTCATTT	NA	False	NA	-31	True	ATTAAA	-15	NA	88987968	88789414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ENSMUSG00000039428.12_88789730_88987968_1	chr7	-	2865	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	27	808	0	-808	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTGCATCAGCACTTG	NA	False	NA	0	True	ATTAAA	-19	NA	88987968	88789729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ENSMUSG00000039449.15_4627349_4656917_1	chr2	-	3062	10	FSM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	-20	480	0	-480	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATATCATATGACATCAGT	NA	False	NA	NA	False	CATAAA	-8	NA	4656917	4627348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
ENSMUSG00000039452.7_65967504_65973905_1	chr9	-	520	5	NNC	ENSMUSG00000039452.7	novel	2543	7	NA	NA	3092	4954	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	211	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGGACGCGCAGCGTG	NA	False	NA	NA	False	NA	NA	NA	65973905	65967503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_65967683_65968748_65968863_65970270_65970365_65972768_65972804_65973807
ENSMUSG00000039452.7_65967513_65973905_1	chr9	-	877	5	NNC	ENSMUSG00000039452.7	novel	2543	7	NA	NA	3092	4945	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	12770	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGAAAAGGGTGTGGACG	NA	False	NA	NA	False	NA	NA	NA	65973905	65967512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_65967683_65968748_65968863_65970270_65970365_65972768_65972954_65973591
ENSMUSG00000039452.7_65967513_65973905_2	chr9	-	886	5	NNC	ENSMUSG00000039452.7	novel	2543	7	NA	NA	3092	4945	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	13034	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGAAAAGGGTGTGGACG	NA	False	NA	NA	False	NA	NA	NA	65973905	65967512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_65967677_65968748_65968863_65970270_65970365_65972768_65972954_65973576
ENSMUSG00000039452.7_65967513_65973905_3	chr9	-	568	3	NNC	ENSMUSG00000039452.7	novel	2543	7	NA	NA	3092	4945	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	356	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGAAAAGGGTGTGGACG	NA	False	NA	NA	False	NA	NA	NA	65973905	65967512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_65967677_65972878_65972954_65973576
ENSMUSG00000039452.7_65967513_65973905_4	chr9	-	784	5	NNC	ENSMUSG00000039452.7	novel	2543	7	NA	NA	3092	4945	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	474	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGAAAAGGGTGTGGACG	NA	False	NA	NA	False	NA	NA	NA	65973905	65967512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_65967683_65968748_65968863_65970270_65970365_65972768_65972894_65973624
ENSMUSG00000039456.11_93629145_93672965_2	chr16	+	4051	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	152.272050435233	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTGAAAGTTATTTCC	1110	False	NA	20	True	AATAAA	-31	NA	93629144	93672965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642233_93644156_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ENSMUSG00000039461.13_108180157_108183147_1	chr9	-	1578	3	FSM	ENSMUSG00000039461.13	ENSMUST00000192886.6	1094	3	212	-696	0	0	multi-exon	TRUE	canonical	3	19	junction_2	5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGTGTGGTTATTCAA	7327	False	NA	-2	True	ATTAAA	-13	NA	108183147	108180156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_108181453_108182524_108182580_108182920
ENSMUSG00000039470.16_40945583_40964348_1	chr8	+	2616	7	Genic_Genomic	ENSMUSG00000039470.16	novel	1547	13	NA	NA	-7909	1039	multi-exon	FALSE	non_canonical	0	0	junction_1	0	421	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCCCAGGTACAAAGCG	NA	False	NA	NA	False	NA	NA	NA	40945582	40964348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964130
ENSMUSG00000039470.16_40960359_40964348_1	chr8	+	761	3	Genic_Genomic	ENSMUSG00000039470.16	novel	1547	13	NA	NA	6867	1039	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCCCAGGTACAAAGCG	NA	False	NA	NA	False	NA	NA	NA	40960358	40964348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_40960690_40963055_40963268_40964130
ENSMUSG00000039470.16_40960359_40964761_1	chr8	+	724	3	Genic_Genomic	ENSMUSG00000039470.16	novel	1547	13	NA	NA	6867	1452	multi-exon	FALSE	non_canonical	0	0	junction_1	0	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGTCCCGCCGAGGGCGC	NA	False	NA	NA	False	NA	NA	NA	40960358	40964761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_40960690_40963055_40963268_40964580
ENSMUSG00000039474.14_37123451_37146277_1	chr5	-	3512	8	FSM	ENSMUSG00000039474.14	ENSMUST00000043964.13	3787	8	272	3	0	0	multi-exon	FALSE	canonical	3	110	junction_7	10.259888211986	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCTTGCCTTCTGGTTT	NA	False	NA	-2	True	AATAAA	-15	NA	37146277	37123450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_37126023_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
ENSMUSG00000039480.15_34179605_34294535_1	chr10	-	2645	11	FSM	ENSMUSG00000039480.15	ENSMUST00000130290.2	1978	11	-11	-656	0	0	multi-exon	FALSE	canonical	2	9	junction_6	26.4469279879535	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	False	NA	-1	True	AATAAA	-17	NA	34294535	34179604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ENSMUSG00000039480.15_34272932_34294535_1	chr10	-	951	7	FSM	ENSMUSG00000039480.15	ENSMUST00000099973.4	761	7	-58	-132	0	132	multi-exon	FALSE	canonical	2	4	junction_1	35.3714417134627	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGATGTTCAAACCCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	34294535	34272931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_34273238_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ENSMUSG00000039497.9_34027389_34083219_1	chr10	-	3897	6	FSM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	492	0	-146	0	multi-exon	FALSE	canonical	3	186	junction_4	20.6164982477626	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTCTCCTGCTCTGGTG	NA	False	NA	-10	True	AATAAA	-14	NA	34083219	34027388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
ENSMUSG00000039497.9_34027526_34083219_1	chr10	-	3760	6	FSM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	492	137	-146	-137	multi-exon	FALSE	canonical	3	186	junction_4	20.6164982477626	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTTGAAATAAACTATT	NA	False	NA	NA	False	NA	NA	NA	34083219	34027525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
ENSMUSG00000039515.12_30306143_30337817_1	chr2	+	2500	10	NNC	ENSMUSG00000039515.12	novel	2586	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	163.062663104604	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	False	NA	17	True	ATTAAA	-20	NA	30306142	30337817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328372_30329675_30329777_30333301_30333410_30336388
ENSMUSG00000039515.12_30306208_30337817_1	chr2	+	2429	10	FSM	ENSMUSG00000039515.12	ENSMUST00000042055.10	2586	10	157	0	0	0	multi-exon	FALSE	canonical	3	440	junction_4	51.3501655905104	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	False	NA	17	True	ATTAAA	-20	NA	30306207	30337817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
ENSMUSG00000039515.12_30331865_30337817_1	chr2	+	1663	3	FSM	ENSMUSG00000039515.12	ENSMUST00000131476.8	989	3	0	-674	0	0	multi-exon	FALSE	canonical	3	6	junction_1	219	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	9369	False	NA	17	True	ATTAAA	-20	NA	30331864	30337817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30331991_30333301_30333410_30336388
ENSMUSG00000039521.14_7460049_7471620_1	chrX	+	2216	17	NIC	ENSMUSG00000039521.14	novel	3834	14	NA	NA	7455	10136	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	674	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGTCACGTGCCGCGCG	NA	False	NA	NA	False	NA	NA	NA	7460048	7471620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
ENSMUSG00000039531.9_33795138_33827208_1	chr10	-	2061	11	NIC	ENSMUSG00000039531.9	novel	2180	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	23.419863364247	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGTTTCTTGTCTAT	NA	False	NA	-1	True	AATAAA	-20	NA	33827208	33795137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827198
ENSMUSG00000039542.17_49443462_49481203_1	chr9	-	1986	13	NNC	ENSMUSG00000039542.17	novel	6050	18	NA	NA	-1354	-886	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	44.198651940227	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTCTGTGATTTTGTTG	9144	False	NA	NA	False	NA	NA	NA	49481203	49443461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_49443699_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125
ENSMUSG00000039568.7_4692652_4693344_1	chr16	-	424	2	NNC	ENSMUSG00000039568.7	novel	4749	2	NA	NA	4325	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCACCAGGCTCTGTAGT	4494	False	NA	-11	True	NA	NA	NA	4693344	4692651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_4692968_4693236
ENSMUSG00000039568.7_4692652_4697682_1	chr16	-	1344	3	FSM	ENSMUSG00000039568.7	ENSMUST00000037843.7	1851	3	497	10	-13	0	multi-exon	FALSE	canonical	3	334	junction_1	8.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCACCAGGCTCTGTAGT	156	False	NA	-11	True	NA	NA	NA	4697682	4692651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4693734_4694225_4694286_4697480
ENSMUSG00000039615.10_26048038_26050741_1	chr17	-	1995	9	NIC	ENSMUSG00000039615.10	novel	1171	5	NA	NA	1152	1441	intron_retention	FALSE	non_canonical	0	0	junction_1	0	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGCAGGCGCGCAGCACG	7939	False	NA	NA	False	NA	NA	NA	26050741	26048037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_26048138_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048915_26049036_26049112_26049181_26049273_26049409_26049483
ENSMUSG00000039615.10_26049608_26051893_1	chr17	-	1180	7	NNC	ENSMUSG00000039615.10	novel	1803	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_5	546.882579312557	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGCTGGTGCAGT	6787	False	NA	-17	True	AATAAA	-17	NA	26051893	26049607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050884_26051019_26051219_26051665
ENSMUSG00000039615.10_26049608_26051893_2	chr17	-	1232	7	FSM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	442	129	0	0	multi-exon	FALSE	canonical	3	1378	junction_3	85.5336191213724	1651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGCTGGTGCAGT	6787	False	NA	-17	True	AATAAA	-17	NA	26051893	26049607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26051665
ENSMUSG00000039623.14_142449699_142463560_1	chr5	+	2894	17	FSM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	-110	905	0	3	multi-exon	FALSE	canonical	3	53	junction_8	14.9769353924626	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8590	False	NA	17	True	AATAAA	-22	NA	142449698	142463560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ENSMUSG00000039623.14_142449809_142463560_1	chr5	+	2784	17	FSM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	0	905	0	3	multi-exon	FALSE	canonical	3	53	junction_8	14.9769353924626	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8700	False	NA	17	True	AATAAA	-22	NA	142449808	142463560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ENSMUSG00000039630.11_178156880_178161515_1	chr1	-	1561	11	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	3847	4972	596	2551	3prime_fragment	FALSE	canonical	2	3444	junction_4	967.812874475226	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCACAAGAAGTCGACTG	NA	False	NA	-9	True	AATAAA	-27	NA	178161515	178156879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451
ENSMUSG00000039637.16_4444748_4497542_1	chr16	-	3446	28	FSM	ENSMUSG00000039637.16	ENSMUST00000038552.13	4296	28	99	751	0	493	multi-exon	TRUE	canonical	3	90	junction_15	10.2195380265448	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4497542	4444747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ENSMUSG00000039640.8_120375439_120379529_1	chr11	+	954	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	0	362	0	246	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	7419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGTGTGTGTGCCCAG	8955	False	NA	-26	True	AATATA	-23	NA	120375438	120379529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
ENSMUSG00000039660.17_30063483_30068463_1	chr2	-	1817	12	NIC	ENSMUSG00000039660.17	novel	1805	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	110.297194317807	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTCTCTAGACCCTGAT	NA	False	NA	-28	True	AATAAA	-15	NA	30068463	30063482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066015_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068401
ENSMUSG00000039660.17_30063483_30068463_2	chr2	-	1800	12	NNC	ENSMUSG00000039660.17	novel	1805	12	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	113.799519236737	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTCTCTAGACCCTGAT	NA	False	NA	-28	True	AATAAA	-15	NA	30068463	30063482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067728_30067931_30067978_30068401
ENSMUSG00000039670.3_120347432_120348894_1	chr11	-	783	2	FSM	ENSMUSG00000039670.3	ENSMUST00000137632.2	372	2	-132	-279	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCAGGGGCTTTTGTGT	959	False	NA	-6	True	AATAAA	-18	NA	120348894	120347431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120347989_120348668
ENSMUSG00000039671.19_165627439_165740936_1	chr2	-	3029	20	NIC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_8	168.338186851215	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGAACCGCCACCTTTA	NA	False	NA	NA	False	NA	NA	NA	165740936	165627438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
ENSMUSG00000039671.19_165652162_165659120_1	chr2	-	819	3	Genic_Genomic	ENSMUSG00000039671.19	novel	5072	22	NA	NA	34922	16887	multi-exon	FALSE	non_canonical	0	0	junction_1	0	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTTATGACTGCCCTT	NA	False	NA	NA	False	NA	NA	NA	165659120	165652161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_165652330_165657273_165657453_165658648
ENSMUSG00000039671.19_165669049_165740936_1	chr2	-	2431	12	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	166.859667865936	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGAATGGTTGTGTTTA	NA	False	NA	33	True	AATAGA	-13	NA	165740936	165669048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_165669638_165669852_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165740835
ENSMUSG00000039671.19_165669102_165703531_1	chr2	-	2202	11	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	394	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	191.662959384436	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGCTCTCTTGTTCCGC	NA	False	NA	-20	True	AATAAA	-22	NA	165703531	165669101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_165669638_165669852_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165703460
ENSMUSG00000039671.19_165669102_165703531_2	chr2	-	2277	11	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	394	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	193.282720386485	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGCTCTCTTGTTCCGC	NA	False	NA	-20	True	AATAAA	-22	NA	165703531	165669101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_165669638_165669852_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165703460
ENSMUSG00000039671.19_165669102_165726597_1	chr2	-	2347	12	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	175.668828168468	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGCTCTCTTGTTCCGC	NA	False	NA	-20	True	AATAAA	-22	NA	165726597	165669101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_165669638_165669852_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527
ENSMUSG00000039678.13_30023803_30040649_1	chr2	+	2174	12	FSM	ENSMUSG00000039678.13	ENSMUST00000044556.12	3595	12	45	1376	0	-1376	multi-exon	FALSE	canonical	1	2	junction_7	5.33195574495097	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGCCTGAGGCCTCCA	2742	False	NA	NA	False	NA	NA	NA	30023802	30040649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30023925_30024808_30024883_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038634_30038796_30038942_30039001_30039711
ENSMUSG00000039678.13_30023803_30040649_2	chr2	+	2292	14	NNC	ENSMUSG00000039678.13	novel	3595	12	NA	NA	0	-1376	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	5.87845328447471	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGCCTGAGGCCTCCA	2742	False	NA	NA	False	NA	NA	NA	30023802	30040649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_30023925_30024808_30024883_30025420_30025565_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038634_30038796_30038942_30039001_30039711_30040358_30040383
ENSMUSG00000039678.13_30023803_30040649_3	chr2	+	2150	13	NNC	ENSMUSG00000039678.13	novel	3595	12	NA	NA	0	-1376	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	5.73488351136175	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGCCTGAGGCCTCCA	2742	False	NA	NA	False	NA	NA	NA	30023802	30040649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_30023925_30024808_30024883_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038634_30038796_30038942_30039001_30039711_30040360_30040383
ENSMUSG00000039678.13_30023803_30040649_4	chr2	+	2318	13	NIC	ENSMUSG00000039678.13	novel	3595	12	NA	NA	0	-1376	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	5.68379763499331	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGCCTGAGGCCTCCA	2742	False	NA	NA	False	NA	NA	NA	30023802	30040649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_30023925_30024808_30024883_30025420_30025565_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038634_30038796_30038942_30039001_30039711
ENSMUSG00000039678.13_30023803_30040649_5	chr2	+	2133	11	NIC	ENSMUSG00000039678.13	novel	3595	12	NA	NA	0	-1376	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	5.71051661410769	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGCCTGAGGCCTCCA	2742	False	NA	NA	False	NA	NA	NA	30023802	30040649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_30023925_30024808_30024883_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038634_30038796_30038942_30039001_30039711
ENSMUSG00000039678.13_30023803_30040649_7	chr2	+	2148	13	NNC	ENSMUSG00000039678.13	novel	3595	12	NA	NA	0	-1376	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	5.73488351136175	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGCCTGAGGCCTCCA	2742	False	NA	NA	False	NA	NA	NA	30023802	30040649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_30023925_30024808_30024883_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038634_30038796_30038942_30039001_30039711_30040358_30040383
ENSMUSG00000039678.13_30023803_30042025_1	chr2	+	935	10	NNC	ENSMUSG00000039678.13	novel	3595	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	5.57994645755099	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCGGTGCTGTGCTGGCT	2742	False	NA	20	True	AATAAA	-19	NA	30023802	30042025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_30023925_30024808_30024883_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037424_30041993
ENSMUSG00000039682.13_45650846_45669501_1	chr5	+	1605	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	130	532	0	-532	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	13004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTTGTTCTTTTTTTT	NA	False	NA	17	True	ACTAAA	-2	NA	45650845	45669501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ENSMUSG00000039682.13_45650846_45669625_1	chr5	+	1729	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	130	408	0	-408	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	13445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTTCAAGCCATATTT	NA	False	NA	14	True	ATTAAA	-17	NA	45650845	45669625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ENSMUSG00000039682.13_45650846_45670033_1	chr5	+	2137	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	130	0	0	0	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	15744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGTTCTGTGAAGGGTC	NA	False	NA	35	True	AATAAA	-34	NA	45650845	45670033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ENSMUSG00000039693.12_48539935_48561919_2	chr4	+	1558	3	NNC	ENSMUSG00000039693.12	novel	1589	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	150	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTACACTGTGTATGTT	18	False	NA	15	True	NA	NA	NA	48539934	48561919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_48539966_48552379_48552831_48560843
ENSMUSG00000039693.12_48540079_48561919_1	chr4	+	1720	3	FSM	ENSMUSG00000039693.12	ENSMUST00000064807.9	1378	3	0	-342	0	0	multi-exon	FALSE	canonical	3	126	junction_1	89	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTACACTGTGTATGTT	2	True	NA	15	True	NA	NA	NA	48540078	48561919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_48540272_48552379_48552831_48560843
ENSMUSG00000039699.15_6184416_6191170_1	chr19	+	868	5	NNC	ENSMUSG00000039699.15	novel	1584	4	NA	NA	-6597	-30227	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3121	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGACCCCGCTCCCGTCT	46	False	NA	NA	False	NA	NA	NA	6184415	6191170	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_6184832_6186008_6186090_6187507_6187664_6187759_6187871_6191066
ENSMUSG00000039720.8_27687487_27713856_1	chr8	-	1303	9	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_5	36.3825164055484	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTATGTTCTCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	27713856	27687486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27690260_27690373_27690749_27690932_27692399_27692492_27713715
ENSMUSG00000039720.8_27687487_27713856_2	chr8	-	1601	10	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_6	20.0831604418561	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTATGTTCTCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	27713856	27687486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692680_27713715
ENSMUSG00000039720.8_27687487_27713856_3	chr8	-	1413	10	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	28.2016547977833	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTATGTTCTCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	27713856	27687486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692492_27713715
ENSMUSG00000039720.8_27687487_27713856_4	chr8	-	1408	10	NNC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_9	32.9807276308715	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTATGTTCTCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	27713856	27687486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689971_27690260_27690373_27690749_27690932_27692399_27692492_27713715
ENSMUSG00000039735.17_122332374_122413370_1	chr3	-	4004	15	NIC	ENSMUSG00000039735.17	novel	5357	15	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	12.9545910229319	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAAGATGTGTACTTATC	NA	False	NA	-5	True	AATAAA	-18	NA	122413370	122332373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
ENSMUSG00000039737.12_136209938_136227789_1	chr5	-	908	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	28	2957	-25	0	multi-exon	FALSE	canonical	3	446	junction_2	42.6164287569946	1910	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTTGTCCACACGTGCG	NA	False	NA	-13	True	AGTAAA	-16	NA	136227789	136209937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
ENSMUSG00000039738.17_3798829_3821621_1	chr16	-	4833	14	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-5	-1832	combination_of_known_junctions	FALSE	canonical	3	32	junction_10	9.26212622719647	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGTTCTAAAACTGAAGG	NA	False	NA	NA	False	NA	NA	NA	3821621	3798828	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3821595
ENSMUSG00000039745.9_49408863_49423359_1	chr7	+	902	6	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	0	-364	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	93.7861397009174	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGTGTGCTTCTCCT	9880	False	NA	3	True	TATAAA	-17	NA	49408862	49423359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_49408894_49409289_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ENSMUSG00000039745.9_49408863_49423359_2	chr7	+	846	6	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	0	-364	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	90.6598036618214	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGTGTGCTTCTCCT	9880	False	NA	3	True	TATAAA	-17	NA	49408862	49423359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_49408894_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ENSMUSG00000039745.9_49408863_49423743_1	chr7	+	1230	6	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	0	20	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	90.6598036618214	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGTTCTAGTT	9880	False	NA	15	True	AATAAA	-15	NA	49408862	49423743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_49408894_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ENSMUSG00000039745.9_49408863_49423743_2	chr7	+	1286	6	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	0	20	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	93.7861397009174	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGTTCTAGTT	9880	False	NA	15	True	AATAAA	-15	NA	49408862	49423743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_49408894_49409289_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ENSMUSG00000039745.9_49408901_49423359_1	chr7	+	974	6	FSM	ENSMUSG00000039745.9	ENSMUST00000207895.2	1338	6	0	364	0	-364	multi-exon	FALSE	canonical	3	128	junction_1	54.5688555863141	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGTGTGCTTCTCCT	9918	False	NA	3	True	TATAAA	-17	NA	49408900	49423359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_49409060_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ENSMUSG00000039748.12_175708360_175736170_1	chr1	+	2698	15	FSM	ENSMUSG00000039748.12	ENSMUST00000039725.12	7796	15	213	4885	0	55	multi-exon	FALSE	canonical	3	208	junction_2	66.5922714152693	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGTATTAGTCTCAATG	9766	False	NA	6	True	AAGAAA	-16	NA	175708359	175736170	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ENSMUSG00000039748.12_175708360_175736299_1	chr1	+	2827	15	FSM	ENSMUSG00000039748.12	ENSMUST00000039725.12	7796	15	213	4756	0	1	multi-exon	FALSE	canonical	3	208	junction_2	66.5922714152693	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGGGAAGTTTAAATGC	9766	False	NA	6	True	AATAAA	-14	NA	175708359	175736299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ENSMUSG00000039748.12_175708360_175736299_2	chr1	+	2641	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	116.353788428365	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGGGAAGTTTAAATGC	9766	False	NA	6	True	AATAAA	-14	NA	175708359	175736299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723734_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ENSMUSG00000039748.12_175708360_175736299_3	chr1	+	2882	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	121.367631767355	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGGGAAGTTTAAATGC	9766	False	NA	6	True	AATAAA	-14	NA	175708359	175736299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720538_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ENSMUSG00000039753.17_43901958_43939455_1	chr5	-	2725	12	NNC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	155.880543371047	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTGTTGTGATTT	8865	False	NA	-1	True	AATAAA	-28	NA	43939455	43901957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_43902718_43908203_43908353_43915563_43915754_43915849_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ENSMUSG00000039753.17_43919935_43939451_1	chr5	-	1177	6	FSM	ENSMUSG00000039753.17	ENSMUST00000143316.8	2731	6	-7	1561	0	-281	multi-exon	FALSE	canonical	3	545	junction_2	25.4762634622898	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGGCTATTTTTGTGTG	8869	False	NA	NA	False	ATTAAA	-17	NA	43939451	43919934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ENSMUSG00000039753.17_43976233_43999752_1	chr5	-	1280	9	Genic_Genomic	ENSMUSG00000039753.17	novel	2762	11	NA	NA	-20772	-50782	multi-exon	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCCTCCCAGTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	43999752	43976232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_43976436_43977819_43977947_43978951_43979088_43979608_43979692_43982669_43982747_43983605_43983699_43994802_43994890_43997772_43997833_43999338
ENSMUSG00000039754.11_136165008_136170469_1	chr5	+	1652	3	FSM	ENSMUSG00000039754.11	ENSMUST00000136634.8	557	3	8	-1103	0	0	multi-exon	FALSE	canonical	3	9	junction_1	26.5	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTCTCCTTTTCCCAT	NA	False	NA	NA	False	AATAAA	-26	NA	136165007	136170469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_136165149_136168315_136168390_136169032
ENSMUSG00000039754.11_136165008_136170469_2	chr5	+	1881	3	FSM	ENSMUSG00000039754.11	ENSMUST00000125923.2	1040	3	-4	-837	0	0	multi-exon	FALSE	canonical	2	7	junction_1	27.5	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTCTCCTTTTCCCAT	NA	False	NA	NA	False	AATAAA	-26	NA	136165007	136170469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_136165254_136168191_136168390_136169032
ENSMUSG00000039756.13_122068067_122078920_1	chr3	+	2390	7	NNC	ENSMUSG00000039756.13	novel	2429	7	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_3	488.074931633339	3265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGCCTCTTGGAATAA	NA	False	NA	23	True	AATAAA	-19	NA	122068066	122078920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_122068128_122068846_122070460_122072394_122072534_122074385_122074473_122075977_122076143_122078042_122078153_122078705
ENSMUSG00000039756.13_122068067_122078920_2	chr3	+	1057	3	NNC	ENSMUSG00000039756.13	novel	911	3	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_2	665	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGCCTCTTGGAATAA	NA	False	NA	23	True	AATAAA	-19	NA	122068066	122078920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_122068128_122068846_122069769_122078846
ENSMUSG00000039759.11_152067096_152073437_1	chr4	-	1005	3	FSM	ENSMUSG00000039759.11	ENSMUST00000105665.3	832	3	-10	-163	0	0	multi-exon	FALSE	canonical	3	60	junction_1	59.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGGCTGTCACTCGGTT	NA	False	NA	-3	True	AATAAA	-16	NA	152073437	152067095	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_152067810_152070125_152070319_152073339
ENSMUSG00000039768.17_152018191_152065679_1	chr4	+	2193	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	43	915	0	0	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGGTTTGGAAACTAGT	9113	False	NA	28	True	TATAAA	-20	NA	152018190	152065679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039768.17_152018191_152066412_1	chr4	+	2926	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	43	182	0	-182	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACTTCTGTCCATCTGT	9113	False	NA	18	True	NA	NA	NA	152018190	152066412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039770.7_73143701_73156502_1	chr17	+	1179	3	FSM	ENSMUSG00000039770.7	ENSMUST00000045174.7	3120	3	253	1688	253	673	multi-exon	FALSE	canonical	3	244	junction_1	49	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTCCTCTGTTACT	998	False	NA	13	True	AATAAA	-13	NA	73143700	73156502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_73143787_73153273_73153439_73155574
ENSMUSG00000039770.7_73143701_73157433_1	chr17	+	2110	3	FSM	ENSMUSG00000039770.7	ENSMUST00000045174.7	3120	3	253	757	253	1	multi-exon	FALSE	canonical	3	244	junction_1	49	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTACAGAACTGCTACTT	998	False	NA	9	True	AATAAA	-18	NA	73143700	73157433	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_73143787_73153273_73153439_73155574
ENSMUSG00000039770.7_73144531_73156502_1	chr17	+	1377	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233886.2	704	3	0	-673	0	673	multi-exon	FALSE	canonical	3	29	junction_1	156.5	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTCCTCTGTTACT	1828	False	NA	13	True	AATAAA	-13	NA	73144530	73156502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_73144815_73153273_73153439_73155574
ENSMUSG00000039770.7_73144531_73157433_1	chr17	+	2308	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233886.2	704	3	0	-1604	0	1	multi-exon	FALSE	canonical	3	29	junction_1	156.5	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTACAGAACTGCTACTT	1828	False	NA	9	True	AATAAA	-18	NA	73144530	73157433	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_73144815_73153273_73153439_73155574
ENSMUSG00000039795.15_10405015_10416376_1	chr3	-	1810	8	NIC	ENSMUSG00000039795.15	novel	936	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_2	296.912685578004	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCATTTGATCTAT	NA	False	NA	-3	True	AATAAA	-43	NA	10416376	10405014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_10405966_10406053_10406206_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10413613_10416301
ENSMUSG00000039795.15_10405015_10416376_2	chr3	-	1893	7	NIC	ENSMUSG00000039795.15	novel	936	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	9	junction_2	304.969260746063	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCATTTGATCTAT	NA	False	NA	-3	True	AATAAA	-43	NA	10416376	10405014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_10405966_10406053_10406206_10409860_10409983_10410994_10411298_10412224_10412472_10413569_10413613_10416301
ENSMUSG00000039795.15_10405015_10416376_3	chr3	-	1633	7	NIC	ENSMUSG00000039795.15	novel	954	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_2	318.999869383463	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCATTTGATCTAT	NA	False	NA	-3	True	AATAAA	-43	NA	10416376	10405014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_10405966_10406053_10406206_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10416228
ENSMUSG00000039795.15_10405877_10416376_1	chr3	-	741	8	FSM	ENSMUSG00000039795.15	ENSMUST00000108377.8	936	8	-3	198	0	0	multi-exon	FALSE	canonical	1	9	junction_2	268.235352035545	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAATGGAGGAAATGTTA	NA	False	NA	NA	False	NA	NA	NA	10416376	10405876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_10405966_10406053_10406206_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
ENSMUSG00000039798.3_29759506_29772057_1	chr2	-	1920	12	NIC	ENSMUSG00000039798.3	novel	1406	2	NA	NA	-11728	-771	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGAGGGGGCGGGATGG	1455	False	NA	NA	False	NA	NA	NA	29772057	29759505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_29759738_29761034_29761146_29761286_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
ENSMUSG00000039826.14_29666122_29677676_2	chr2	-	2390	10	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	69.5021093915612	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	-6	True	TATAAA	-23	NA	29677676	29666121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_29666232_29666386_29666654_29666678_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ENSMUSG00000039826.14_29666122_29677676_3	chr2	-	2372	9	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	57.2362155894325	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	-6	True	TATAAA	-23	NA	29677676	29666121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_29666427_29666624_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ENSMUSG00000039826.14_29666122_29677676_4	chr2	-	2376	9	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	57.2362155894325	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	-6	True	TATAAA	-23	NA	29677676	29666121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_29666271_29666464_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ENSMUSG00000039826.14_29666945_29677676_1	chr2	-	1685	7	FSM	ENSMUSG00000039826.14	ENSMUST00000156846.8	3930	7	-4	2249	-4	755	multi-exon	FALSE	canonical	3	76	junction_4	39.677869566464	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTCTTTCTTATGCATG	NA	False	NA	-3	True	TATAAA	-24	NA	29677676	29666944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
ENSMUSG00000039826.14_29666945_29677676_2	chr2	-	1747	8	FSM	ENSMUSG00000039826.14	ENSMUST00000048044.12	3408	8	838	823	-4	755	multi-exon	FALSE	canonical	3	126	junction_2	23.9267589931935	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTCTTTCTTATGCATG	NA	False	NA	-3	True	TATAAA	-24	NA	29677676	29666944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ENSMUSG00000039828.8_7902536_8128675_1	chr15	-	2128	18	NNC	ENSMUSG00000039828.8	novel	2126	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	102.37274994253	630	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCCTTTCTGTTATGG	NA	False	NA	1	True	AATAAA	-21	NA	8128675	7902535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916885_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108849_8111945_8112067_8123159_8123244_8128439_8128506_8128602
ENSMUSG00000039828.8_8121167_8128675_1	chr15	-	1656	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	18	-544	0	544	multi-exon	FALSE	canonical	3	289	junction_1	79.3823378060608	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCTCTCTGATTATTTT	NA	False	NA	-25	True	NA	NA	NA	8128675	8121166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
ENSMUSG00000039828.8_8121303_8128675_1	chr15	-	1520	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	18	-408	0	408	multi-exon	FALSE	canonical	3	289	junction_1	79.3823378060608	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCTGCTACTGCTTT	NA	False	NA	NA	False	NA	NA	NA	8128675	8121302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
ENSMUSG00000039850.17_119382456_119398592_1	chr11	+	1455	8	FSM	ENSMUSG00000039850.17	ENSMUST00000106245.9	5126	8	0	3671	0	15	multi-exon	FALSE	canonical	3	37	junction_3	3.65892813567591	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATGGGTCACTCTTAC	6537	False	NA	NA	False	AATACA	-23	NA	119382455	119398592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
ENSMUSG00000039865.9_121253177_121325926_1	chr3	-	2493	15	FSM	ENSMUSG00000039865.9	ENSMUST00000039197.9	2620	15	127	0	127	0	multi-exon	FALSE	canonical	2	7	junction_10	3.70672307009404	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTTTGTTCATCTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	121325926	121253176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_121253726_121254750_121254988_121257062_121257201_121279910_121279998_121283846_121284004_121291367_121291534_121303022_121303210_121303840_121303966_121305970_121306061_121307305_121307467_121318475_121318570_121319315_121319453_121320712_121320856_121325315_121325421_121325809
ENSMUSG00000039873.5_164672652_164674757_1	chr2	-	395	2	FSM	ENSMUSG00000039873.5	ENSMUST00000042775.5	1014	2	619	0	619	0	multi-exon	FALSE	canonical	3	37	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGAGGGTCTCCTTGC	NA	False	NA	NA	False	AATAAA	-24	NA	164674757	164672651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_164672908_164674618
ENSMUSG00000039886.9_135764339_135773075_1	chr5	-	1312	12	NNC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	204.293056398307	1153	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGGACTGTGGATGTG	5290	False	NA	-4	True	AATAAA	-21	NA	135773075	135764338	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765181_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
ENSMUSG00000039886.9_135764339_135773075_2	chr5	-	1331	12	NNC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	207.955454543467	1161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGGACTGTGGATGTG	5290	False	NA	-4	True	AATAAA	-21	NA	135773075	135764338	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765352_135765446_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
ENSMUSG00000039887.12_121085422_121092549_1	chr3	+	508	2	ISM	ENSMUSG00000039887.12	ENSMUST00000198341.2	831	3	-117	21761	0	-21297	5prime_fragment	FALSE	canonical	3	72	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGAATTTCTTTAAGAT	NA	False	NA	NA	False	AATAAA	-42	NA	121085421	121092549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_121085633_121092252
ENSMUSG00000039887.12_121085422_121155669_2	chr3	+	963	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	0	1074	0	313	multi-exon	FALSE	canonical	3	72	junction_1	14.5143607047182	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGGTTCTCTTGGGAC	NA	False	NA	25	True	AATAAA	-26	NA	121085421	121155669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
ENSMUSG00000039901.11_45806583_45986940_1	chr19	-	2909	26	FSM	ENSMUSG00000039901.11	ENSMUST00000045396.9	3676	26	-13	780	-13	-780	multi-exon	FALSE	canonical	3	159	junction_20	17.3221707646588	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCAAGGTGCCTACTTT	6634	False	NA	-6	True	AATAAA	-20	NA	45986940	45806582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ENSMUSG00000039908.15_119269976_119271875_1	chr11	+	1041	3	NNC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	16501	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	43	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATACAATATTCTG	1924	False	NA	NA	False	ATTAAA	-45	NA	119269975	119271875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_119270079_119270684_119270758_119271010
ENSMUSG00000039917.11_135661577_135673002_1	chr5	+	1994	5	FSM	ENSMUSG00000039917.11	ENSMUST00000136748.6	4363	5	69	2300	0	-379	multi-exon	FALSE	canonical	3	43	junction_1	101.030626544628	298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTGTGGCATACTGTG	NA	False	NA	17	True	TATAAA	-21	NA	135661576	135673002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135661773_135663957_135664078_135664848_135665257_135667943_135668095_135671883
ENSMUSG00000039929.15_90548415_90551856_1	chr16	-	1410	3	ISM	ENSMUSG00000039929.15	ENSMUST00000140920.2	7344	39	55424	0	17823	0	3prime_fragment	FALSE	canonical	3	118	junction_2	5.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGTACTTTGTTT	NA	False	NA	-10	True	AATAAA	-16	NA	90551856	90548414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_90549067_90550210_90550811_90551698
ENSMUSG00000039942.16_5215041_5247817_1	chr15	-	1636	5	Fusion	ENSMUSG00000039942.16_ENSMUSG00000087532.2	novel	3771	3	NA	NA	24374	-10475	multi-exon	FALSE	non_canonical	0	0	junction_1	0	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCAGGACCACTAATCCC	NA	False	NA	NA	False	AAGAAA	-29	NA	5247817	5215040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr15_-_5215054_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ENSMUSG00000039942.16_5215041_5249790_1	chr15	-	3609	5	Fusion	ENSMUSG00000039942.16_ENSMUSG00000087532.2	novel	3771	3	NA	NA	22401	-10475	multi-exon	FALSE	non_canonical	0	0	junction_1	0	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCAGGACCACTAATCCC	NA	False	NA	NA	False	AAGAAA	-29	NA	5249790	5215040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr15_-_5215054_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ENSMUSG00000039953.14_149732343_149733356_1	chr4	+	987	2	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	20756	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	364	junction_1	0	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149732342	149733356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_149733144_149733170
ENSMUSG00000039953.14_149732865_149733356_1	chr4	+	465	2	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	21278	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	364	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149732864	149733356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_149733144_149733170
ENSMUSG00000039958.18_149043062_149052669_1	chr6	+	1621	5	FSM	ENSMUSG00000039958.18	ENSMUST00000134306.8	848	5	0	-773	0	0	multi-exon	FALSE	canonical	3	12	junction_2	6.86931583201704	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAACTCAAGTGTTATC	NA	False	NA	NA	False	NA	NA	NA	149043061	149052669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_149043203_149044103_149044214_149045531_149045941_149048655_149048787_149051839
ENSMUSG00000039959.14_135439011_135518112_1	chr5	-	3917	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	0	-3622	at_least_one_novel_splicesite	TRUE	canonical	2	120	junction_16	38.9079599109602	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTCTGCATCCTAC	9610	False	NA	-1	True	TATAAA	-28	NA	135518112	135439010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ENSMUSG00000039959.14_135464969_135518112_1	chr5	-	1571	13	NIC	ENSMUSG00000039959.14	novel	1625	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	166	junction_11	29.2616311157727	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCAATTAGAATTTGTT	9610	False	NA	NA	False	AATAAA	-15	NA	135518112	135464968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ENSMUSG00000039983.14_118848642_118859858_1	chr2	-	1472	4	FSM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	16	382	0	-382	multi-exon	FALSE	canonical	3	33	junction_3	9.0921211313239	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTGTGTAGTGTGTGTG	NA	False	NA	-2	True	TATAAA	-15	NA	118859858	118848641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_118849646_118852549_118852707_118857618_118857869_118859797
ENSMUSG00000039983.14_118848642_118859858_2	chr2	-	1481	4	NIC	ENSMUSG00000039983.14	novel	1870	4	NA	NA	0	-382	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	18.6726180988812	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTGTGTAGTGTGTGTG	NA	False	NA	-2	True	TATAAA	-15	NA	118859858	118848641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_118849646_118852549_118852707_118857618_118857869_118859788
ENSMUSG00000039985.15_148822555_148847653_1	chr6	-	2608	6	NIC	ENSMUSG00000039985.15	novel	2737	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_5	837.245818144229	3156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148847653	148822554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847544
ENSMUSG00000039985.15_148822555_148847941_1	chr6	-	1375	7	NNC	ENSMUSG00000039985.15	novel	2785	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	833.564967807282	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148847941	148822554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_148822728_148824003_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
ENSMUSG00000039985.15_148823619_148847941_1	chr6	-	1587	6	FSM	ENSMUSG00000039985.15	ENSMUST00000054080.15	2697	6	24	1086	0	592	multi-exon	FALSE	canonical	3	1893	junction_3	186.383046439315	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGACCACAAAGTAGAGAGC	NA	False	NA	NA	False	NA	NA	NA	148847941	148823618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
ENSMUSG00000039990.17_133239422_133273910_1	chr7	+	4484	25	FSM	ENSMUSG00000039990.17	ENSMUST00000051169.13	5424	25	150	790	0	2	multi-exon	FALSE	canonical	3	128	junction_10	22.9037463577953	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTAGTTCCCACTTGC	NA	False	NA	8	True	AATAAA	-21	NA	133239421	133273910	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ENSMUSG00000040006.14_7667184_7668588_1	chr10	-	492	2	NNC	ENSMUSG00000040006.14	novel	353	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAATTTCAACTCC	NA	False	NA	NA	False	NA	NA	NA	7668588	7667183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_7667359_7668271
ENSMUSG00000040013.12_135366220_135378897_1	chr5	-	1167	7	ISM	ENSMUSG00000040013.12	ENSMUST00000201791.4	1297	8	-29	45662	0	0	5prime_fragment	FALSE	canonical	3	68	junction_3	365.317061681433	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGTCATTAGTGTGACA	NA	False	NA	-3	True	ATTAAA	-24	NA	135378897	135366219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_135366562_135368331_135368442_135368775_135368971_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ENSMUSG00000040025.18_131913375_131939402_2	chr4	-	2759	4	NNC	ENSMUSG00000040025.18	novel	2536	4	NA	NA	0	226	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	439.377590082456	1586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGTACCACTTAGTATT	NA	False	NA	-14	True	AATAAA	-23	NA	131939402	131913374	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_131914259_131931442_131933027_131938062_131938143_131939191
ENSMUSG00000040025.18_131913375_131939402_3	chr4	-	1181	4	FSM	ENSMUSG00000040025.18	ENSMUST00000085181.5	955	4	0	-226	0	226	multi-exon	FALSE	canonical	3	30	junction_1	419.072255769283	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGTACCACTTAGTATT	NA	False	NA	-14	True	AATAAA	-23	NA	131939402	131913374	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_131914259_131938062_131938143_131938742_131938768_131939210
ENSMUSG00000040025.18_131913375_131939420_4	chr4	-	1199	4	FSM	ENSMUSG00000040025.18	ENSMUST00000085181.5	955	4	-18	-226	-4	226	multi-exon	FALSE	canonical	3	30	junction_1	419.072255769283	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGTACCACTTAGTATT	NA	False	NA	-14	True	AATAAA	-23	NA	131939420	131913374	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_131914259_131938062_131938143_131938742_131938768_131939210
ENSMUSG00000040026.9_46361422_46363173_1	chr7	-	449	3	NNC	ENSMUSG00000040026.9	novel	494	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9.5	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCGCTGTCACTGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	46363173	46361421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_46361689_46362012_46362152_46363130
ENSMUSG00000040028.11_4338343_4361733_1	chr8	-	2201	5	ISM	ENSMUSG00000040028.11	ENSMUST00000209010.2	2317	6	886	0	886	0	3prime_fragment	FALSE	canonical	3	1686	junction_1	21.8403296678416	548	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	4361733	4338342	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598
ENSMUSG00000040034.16_7543267_7554645_1	chr10	+	1278	8	NNC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	437.746641847747	4415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAATGTTGGCTTGCTGCT	NA	False	NA	20	True	AATAAA	-20	NA	7543266	7554645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552011_7552127_7554331
ENSMUSG00000040034.16_7543267_7554645_2	chr10	+	891	5	NIC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	545.171704603238	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAATGTTGGCTTGCTGCT	NA	False	NA	20	True	AATAAA	-20	NA	7543266	7554645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_7543446_7543765_7543889_7550769_7550922_7552003_7552127_7554331
ENSMUSG00000040034.16_7543304_7554645_1	chr10	+	1171	7	NIC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	11	junction_2	455.428156305202	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAATGTTGGCTTGCTGCT	NA	False	NA	20	True	AATAAA	-20	NA	7543303	7554645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_7543446_7543765_7543889_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
ENSMUSG00000040034.16_7543304_7554645_2	chr10	+	1237	8	NNC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	441.554951857868	4232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAATGTTGGCTTGCTGCT	NA	False	NA	20	True	AATAAA	-20	NA	7543303	7554645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_7543446_7543765_7543889_7545328_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
ENSMUSG00000040034.16_7543304_7554645_3	chr10	+	1213	8	NNC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	436.594614193598	576	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAATGTTGGCTTGCTGCT	NA	False	NA	20	True	AATAAA	-20	NA	7543303	7554645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550805_7550922_7552003_7552127_7554331
ENSMUSG00000040034.16_7543304_7554645_4	chr10	+	1255	8	NNC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	430.625269171445	4433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAATGTTGGCTTGCTGCT	NA	False	NA	20	True	AATAAA	-20	NA	7543303	7554645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552133_7554331
ENSMUSG00000040043.18_127969193_128012498_1	chr10	-	407	3	NNC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-150	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	149.5	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTGGCTGATGGAAC	NA	False	NA	-57	True	NA	NA	NA	128012498	127969192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_127969207_127987111_127987225_128012218
ENSMUSG00000040043.18_127969193_128012498_2	chr10	-	1414	13	FSM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	-150	217	-150	0	multi-exon	FALSE	canonical	3	274	junction_9	21.4048281157936	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTGGCTGATGGAAC	NA	False	NA	-57	True	NA	NA	NA	128012498	127969192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ENSMUSG00000040044.12_34567214_34614893_1	chr4	-	2203	20	NNC	ENSMUSG00000040044.12	novel	3089	14	NA	NA	0	3582	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	162.441193280024	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTGTGGGGTTACT	15	True	NA	NA	False	NA	NA	NA	34614893	34567213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_34567391_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ENSMUSG00000040044.12_34570796_34614893_1	chr4	-	2248	20	NNC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	166.794348137571	1806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	15	True	NA	-17	True	CATAAA	-21	NA	34614893	34570795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584879_34585568_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ENSMUSG00000040044.12_34570796_34614944_1	chr4	-	2397	21	NNC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	205.741245257241	1725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	NA	False	NA	-17	True	CATAAA	-21	NA	34614944	34570795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34610361_34610459_34611021_34611077_34614864
ENSMUSG00000040054.18_127932759_127952626_1	chr10	+	2244	10	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	510	0	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_4	77.9458501496748	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGTGTTACTTGTAGCT	NA	False	NA	NA	False	AATAAA	-38	NA	127932758	127952626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415
ENSMUSG00000040112.10_146944262_146972399_1	chr6	+	1048	7	NNC	ENSMUSG00000040112.10	novel	4162	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	253.535938719193	3082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATTGTCTTACGTCAGG	NA	False	NA	14	True	TATAAA	-16	NA	146944261	146972399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_146944413_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146972051
ENSMUSG00000040112.10_146944262_146972399_2	chr6	+	1084	7	NNC	ENSMUSG00000040112.10	novel	4162	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	253.535938719193	3090	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATTGTCTTACGTCAGG	NA	False	NA	14	True	TATAAA	-16	NA	146944261	146972399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_146944449_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146972051
ENSMUSG00000040123.18_57030380_57049160_1	chr14	-	2883	7	NIC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	-6	405	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	15.7630016882008	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTTGTTTTCTTGTG	8834	False	NA	1	True	NA	NA	NA	57049160	57030379	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
ENSMUSG00000040139.15_136977303_137012485_1	chr7	-	1283	5	FSM	ENSMUSG00000040139.15	ENSMUST00000117404.8	699	5	-21	-563	0	0	multi-exon	FALSE	canonical	3	25	junction_1	88.1373218336024	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGTCTGGCTTGGTGT	NA	False	NA	-7	True	ATTAAA	-14	NA	137012485	136977302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_136978081_136978683_136978847_136989099_136989163_136989268_136989431_137012368
ENSMUSG00000040139.15_136977419_137012485_1	chr7	-	1004	4	FSM	ENSMUSG00000040139.15	ENSMUST00000068996.13	1126	4	6	116	0	-116	multi-exon	FALSE	canonical	3	160	junction_1	38.0292285252044	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTATGATCTTGATGTG	NA	False	NA	NA	False	ATTAAA	-23	NA	137012485	136977418	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_136978081_136989099_136989163_136989268_136989431_137012368
ENSMUSG00000040158.13_73068077_73072873_1	chr11	+	1250	4	FSM	ENSMUSG00000040158.13	ENSMUST00000040687.12	1523	4	168	105	0	0	multi-exon	FALSE	canonical	3	98	junction_1	3.09120616516523	510	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGGTTTCTGTTAGATG	4376	False	NA	NA	False	AATAAA	-16	NA	73068076	73072873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_73068169_73071214_73071335_73071556_73071635_73071913
ENSMUSG00000040167.17_130972885_130994497_1	chr7	-	1167	6	NIC	ENSMUSG00000040167.17	novel	4430	4	NA	NA	889	17496	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACCTTTGCGCCGGGTG	3954	False	NA	NA	False	NA	NA	NA	130994497	130972884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_130973119_130975264_130975560_130975793_130975993_130985653_130985730_130986228_130986323_130994228
ENSMUSG00000040167.17_130992097_131012226_1	chr7	-	2690	4	FSM	ENSMUSG00000040167.17	ENSMUST00000046306.15	4430	4	24	1716	0	0	multi-exon	FALSE	canonical	3	63	junction_1	6.97614984548545	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGTTTCTGTGTACC	NA	False	NA	NA	False	AATAAA	-13	NA	131012226	130992096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_130994310_130995483_130995667_130998397_130998581_131012115
ENSMUSG00000040177.11_130944444_130964425_1	chr7	-	2215	6	FSM	ENSMUSG00000040177.11	ENSMUST00000059438.11	6773	6	63	4495	0	471	multi-exon	FALSE	canonical	3	85	junction_5	3.61109401705356	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTACGTTGTTTCTTC	NA	False	NA	-4	True	AATAGA	-16	NA	130964425	130944443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
ENSMUSG00000040177.11_130944915_130964425_1	chr7	-	1744	6	FSM	ENSMUSG00000040177.11	ENSMUST00000059438.11	6773	6	63	4966	0	0	multi-exon	FALSE	canonical	3	85	junction_5	3.61109401705356	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATATTTGGTTTTTTTT	NA	False	NA	NA	False	AATATA	-25	NA	130964425	130944914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
ENSMUSG00000040188.11_57468226_57495088_1	chr9	+	1350	9	FSM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	0	990	0	73	multi-exon	TRUE	canonical	3	243	junction_4	15.3927742788621	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGCTTGGTCTGATTTT	NA	False	NA	5	True	NA	NA	NA	57468225	57495088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
ENSMUSG00000040204.7_65797644_65809125_1	chr9	+	640	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	125	1423	0	-1423	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCCCTGGCACTCTACTT	NA	False	NA	9	True	NA	NA	NA	65797643	65809125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
ENSMUSG00000040204.7_65797644_65809399_1	chr9	+	914	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	125	1149	0	-1149	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	2774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAGTAAAATCTCTTGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	65797643	65809399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
ENSMUSG00000040213.14_142406841_142450099_1	chr3	+	1567	13	NIC	ENSMUSG00000040213.14	novel	4206	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	27.8910330074421	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCGTGTTGTACTTTC	NA	False	NA	23	True	AATACA	-37	NA	142406840	142450099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_142406937_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ENSMUSG00000040213.14_142418579_142450099_1	chr3	+	1695	13	NNC	ENSMUSG00000040213.14	novel	734	7	NA	NA	-10297	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	24.2674622122344	92	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCGTGTTGTACTTTC	NA	False	NA	23	True	AATACA	-37	NA	142418578	142450099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_142418803_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ENSMUSG00000040219.5_49349564_49397515_1	chr9	-	2317	22	FSM	ENSMUSG00000040219.5	ENSMUST00000055096.5	3628	22	10	1301	0	-1301	multi-exon	FALSE	canonical	3	14	junction_3	5.49706167646225	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATGTCTGCCGGGTTTT	NA	False	NA	0	True	AATAAA	-27	NA	49397515	49349563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_49349757_49351456_49351683_49353136_49353237_49354401_49354504_49355967_49356037_49356484_49356584_49357041_49357180_49357824_49357886_49359226_49359320_49364623_49364793_49367160_49367250_49368132_49368203_49369295_49369485_49369949_49370011_49371689_49371762_49378071_49378132_49381528_49381651_49382425_49382504_49383161_49383184_49383682_49383844_49395969_49396043_49397445
ENSMUSG00000040225.16_162533480_162568094_1	chr1	-	3389	16	ISM	ENSMUSG00000040225.16	ENSMUST00000182149.8	11289	35	0	35186	0	4456	5prime_fragment	FALSE	canonical	3	34	junction_7	8.53593710275692	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCATTGGTTTCAC	3445	False	NA	61	True	AAGAAA	-45	NA	162568094	162533479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550857_162552272_162552439_162567893
ENSMUSG00000040225.16_162542971_162568094_1	chr1	-	1297	9	ISM	ENSMUSG00000040225.16	ENSMUST00000182149.8	11289	35	0	44677	0	-2600	5prime_fragment	FALSE	canonical	3	36	junction_7	3.15980616494113	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAGCAGGTAAATTTGT	3445	False	NA	NA	False	NA	NA	NA	162568094	162542970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550857_162552272_162552439_162567893
ENSMUSG00000040234.17_146544078_146552100_1	chr6	-	774	4	NNC	ENSMUSG00000040234.17	novel	552	4	NA	NA	-7778	-20633	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGAGCGCGAGCGATTG	NA	False	NA	NA	False	NA	NA	NA	146552100	146544077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_146544151_146549669_146549778_146550647_146550749_146551608
ENSMUSG00000040242.15_146479419_146499253_1	chr6	+	1261	6	FSM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	62	1443	0	424	multi-exon	FALSE	canonical	0	0	junction_3	164.658434342125	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGTTGGTGTGGTTTTC	NA	False	NA	22	True	AATAAA	-34	NA	146479418	146499253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146496673_146496788_146498792
ENSMUSG00000040242.15_146479419_146499253_2	chr6	+	1375	7	FSM	ENSMUSG00000040242.15	ENSMUST00000111663.9	2880	7	62	1443	0	424	multi-exon	FALSE	canonical	0	0	junction_3	146.964470385041	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGTTGGTGTGGTTTTC	NA	False	NA	22	True	AATAAA	-34	NA	146479418	146499253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146494246_146496673_146496788_146498792
ENSMUSG00000040263.17_122523072_122556279_1	chr8	-	2006	12	NNC	ENSMUSG00000040263.17	novel	2078	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_9	53.7922234694303	615	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTTTTCTTTCTTCTAC	465	False	NA	-25	True	AATAAA	-17	NA	122556279	122523071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122526396_122527877_122527954_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548041_122548098_122548520_122548613_122556120
ENSMUSG00000040269.6_8867206_8988865_1	chr3	-	670	3	FSM	ENSMUSG00000040269.6	ENSMUST00000042148.6	783	3	113	0	113	0	multi-exon	FALSE	canonical	3	890	junction_1	0.5	4885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGCCGTGGTTCTTTT	NA	False	NA	-1	True	NA	NA	NA	8988865	8867205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_8867475_8965045_8965228_8988646
ENSMUSG00000040280.11_127352992_127358255_2	chr10	+	1707	13	NNC	ENSMUSG00000040280.11	novel	934	4	NA	NA	2156	5232	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCTCTTAGAACGCGTG	NA	False	NA	NA	False	NA	NA	NA	127352991	127358255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127353092_127353631_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ENSMUSG00000040282.14_115412214_115473782_1	chr2	+	686	6	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	0	2658	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	132.367065390149	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTCTGGGGATGTGCTC	NA	False	NA	NA	False	ATTAAA	-14	NA	115412213	115473782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115473594
ENSMUSG00000040296.16_40204849_40220600_1	chr4	-	2461	9	FSM	ENSMUSG00000040296.16	ENSMUST00000137903.8	3533	9	0	1072	0	0	multi-exon	FALSE	canonical	3	61	junction_4	6.68487097856047	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCCAATTCATTCCCT	-9	True	NA	-10	True	AATAAA	-22	NA	40220600	40204848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398
ENSMUSG00000040325.17_106699073_106735758_1	chr9	+	2931	14	ISM	ENSMUSG00000040325.17	ENSMUST00000159645.8	4945	23	0	21884	0	4934	5prime_fragment	FALSE	canonical	3	305	junction_10	23.6240274838185	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGATTGCCAACGGCATTG	NA	False	NA	NA	False	NA	NA	NA	106699072	106735758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022
ENSMUSG00000040331.17_130134256_130148825_1	chr7	-	1149	11	FSM	ENSMUSG00000040331.17	ENSMUST00000160289.9	1435	11	286	0	286	0	multi-exon	FALSE	canonical	3	1333	junction_1	62.2636330453018	410	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTGATCGTTTTTATTG	NA	False	NA	-7	True	ATTAAA	-22	NA	130148825	130134255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
ENSMUSG00000040354.15_127132095_127147547_1	chr10	-	2826	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	108	5	0	0	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	2516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGCCCTCTCCTGGTCT	NA	False	NA	-11	True	AATAAA	-22	NA	127147547	127132094	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ENSMUSG00000040359.15_25248605_25281821_1	chr4	-	3860	20	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	78	junction_1	36.6180404503927	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTTTATGTTATACAG	-6	True	NA	-15	True	AATAAA	-14	NA	25281821	25248604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ENSMUSG00000040359.15_25250147_25281821_1	chr4	-	2774	19	FSM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	0	1542	0	0	multi-exon	FALSE	canonical	3	153	junction_3	22.816024799564	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACTTGTTTGTTATTT	-6	True	NA	3	True	AATAAA	-24	NA	25281821	25250146	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ENSMUSG00000040359.15_25254321_25281821_1	chr4	-	2122	15	ISM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	0	5716	0	-4174	5prime_fragment	FALSE	canonical	3	188	junction_2	18.7215089658709	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGTCAGTCTTCTCCC	-6	True	NA	NA	False	AGTAAA	-42	NA	25281821	25254320	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ENSMUSG00000040370.14_145156926_145162265_1	chr6	+	1478	3	NNC	ENSMUSG00000040370.14	novel	1374	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	145	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAGGAGTCTTTATC	NA	False	NA	14	True	NA	NA	NA	145156925	145162265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_145157127_145160909_145160998_145161076
ENSMUSG00000040385.8_4242172_4245419_1	chr19	+	1360	7	NNC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	1493.56192446856	2442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATAGCCTCTGTCTCTCTT	3385	False	NA	31	True	AATAAA	-20	NA	4242171	4245419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_4242271_4242743_4242876_4243020_4243252_4243770_4243871_4244465_4244690_4244770_4244906_4244980
ENSMUSG00000040385.8_4242172_4245419_2	chr19	+	1365	7	FSM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	108	0	0	0	multi-exon	FALSE	canonical	3	3675	junction_3	183.825475806689	7588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATAGCCTCTGTCTCTCTT	3385	False	NA	31	True	AATAAA	-20	NA	4242171	4245419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
ENSMUSG00000040385.8_4245195_4251638_1	chr19	+	2084	11	NIC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	547	6219	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCGGCCTGGCCTCCGC	6408	False	NA	NA	False	NA	NA	NA	4245194	4251638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ENSMUSG00000040407.19_4131145_4154435_1	chr5	+	3454	11	NNC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	13672	23125	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1465	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGGGCCCTTCACACGC	NA	False	NA	NA	False	NA	NA	NA	4131144	4154435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_4131184_4131349_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ENSMUSG00000040414.9_43652240_43654268_1	chr19	-	901	2	FSM	ENSMUSG00000040414.9	ENSMUST00000236286.2	1046	2	145	0	145	0	multi-exon	FALSE	canonical	3	293	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTGGGTTTGTCTT	NA	False	NA	-3	True	ATTAAA	-19	NA	43654268	43652239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_43653083_43654210
ENSMUSG00000040415.16_127026247_127031597_2	chr10	-	996	4	NIC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	54.0760780957922	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	False	NA	0	True	AATAAA	-25	NA	127031597	127026246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_127026909_127029598_127029673_127030278_127030504_127031562
ENSMUSG00000040428.20_45199313_45203653_1	chr7	+	655	3	ISM	ENSMUSG00000040428.20	ENSMUST00000211797.2	2655	18	19896	0	0	0	3prime_fragment	FALSE	canonical	3	13	junction_1	3.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTGTGACATTGTGTT	NA	False	NA	8	True	AATAAA	-17	NA	45199312	45203653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_45199390_45202992_45203106_45203188
ENSMUSG00000040430.19_107103290_107361525_1	chr11	-	1753	9	NNC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	0	-4572	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	20.8862245271854	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGGCCCCGGAAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	107361525	107103289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_107103485_107107503_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212408_107212502_107228237_107228387_107360716
ENSMUSG00000040434.17_92205021_92211562_1	chr2	-	1168	11	NIC	ENSMUSG00000040434.17	novel	563	5	NA	NA	-6348	-4691	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAACCGTTCCTGGGAGG	NA	False	NA	NA	False	NA	NA	NA	92211562	92205020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_92205167_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
ENSMUSG00000040435.13_45172341_45175692_1	chr7	-	2332	3	NNC	ENSMUSG00000040435.13	novel	2333	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	212	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTACGTGTGTTCTTTAT	3861	False	NA	44	True	AATAAA	-24	NA	45175692	45172340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_45172747_45173162_45174811_45175414
ENSMUSG00000040446.5_24619160_24663164_2	chr18	-	3059	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	97	1143	-13	-1143	multi-exon	FALSE	canonical	3	196	junction_1	46.8807589054993	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGTTGGTTAGCTCA	NA	False	NA	NA	False	GATAAA	-32	NA	24663164	24619159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ENSMUSG00000040446.5_24619710_24663270_1	chr18	-	2615	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	-9	1693	-9	1297	multi-exon	FALSE	canonical	3	196	junction_1	46.8807589054993	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGACCTCGGATATGCTT	NA	False	NA	NA	False	NA	NA	NA	24663270	24619709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ENSMUSG00000040446.5_24621007_24663164_1	chr18	-	1212	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	97	2990	-13	0	multi-exon	FALSE	canonical	3	196	junction_1	46.8807589054993	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCTTTTGTAAGTT	NA	False	NA	NA	False	AATGAA	-17	NA	24663164	24621006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ENSMUSG00000040446.5_24638484_24663270_1	chr18	-	2343	6	ISM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	-9	20467	-9	0	5prime_fragment	FALSE	canonical	3	215	junction_1	43.046951111548	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTCTCATGTTTTTGA	NA	False	NA	-1	True	AATAAA	-18	NA	24663270	24638483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_-_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ENSMUSG00000040451.19_32100127_32219675_2	chr19	-	3372	7	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-3449	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	60.6538447988987	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTATTATATTGTGTT	4127	False	NA	-1	True	AATAAA	-18	NA	32219675	32100126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32219462
ENSMUSG00000040451.19_32100245_32188413_1	chr19	-	3145	6	FSM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	0	117	0	-115	multi-exon	FALSE	canonical	3	81	junction_5	43.4069118920017	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTTAAATCTTTGT	8019	False	NA	-10	True	AATAAA	-17	NA	32188413	32100244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32188227
ENSMUSG00000040451.19_32100245_32219675_1	chr19	-	3254	7	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-3449	-115	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	60.6538447988987	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTTAAATCTTTGT	4127	False	NA	-10	True	AATAAA	-17	NA	32219675	32100244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32219462
ENSMUSG00000040451.19_32101353_32188413_1	chr19	-	2037	6	FSM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	0	1225	0	-191	multi-exon	FALSE	canonical	3	81	junction_5	43.4069118920017	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGGCTGTAAGCCATTTT	8019	False	NA	NA	False	AAAACA	-27	NA	32188413	32101352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32188227
ENSMUSG00000040459.12_8716576_8740104_1	chr8	-	1279	4	FSM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	417	1501	0	0	multi-exon	FALSE	canonical	3	754	junction_2	83.8424448328861	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	5672	False	NA	-11	True	AATAAA	-35	NA	8740104	8716575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976
ENSMUSG00000040463.17_72332203_72341831_1	chr11	+	3573	26	FSM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	22	763	0	0	multi-exon	FALSE	canonical	3	2354	junction_12	204.057066527969	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCACACCAGAAAAGAATG	NA	False	NA	41	True	AAGAAA	-15	NA	72332202	72341831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ENSMUSG00000040463.17_72332203_72342055_1	chr11	+	3797	26	FSM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	22	539	0	0	multi-exon	FALSE	canonical	3	2354	junction_12	204.057066527969	3322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAAAAAGAGAAGCTG	NA	False	NA	NA	False	NA	NA	NA	72332202	72342055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ENSMUSG00000040463.17_72332203_72342376_1	chr11	+	4118	26	FSM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	22	218	0	-218	multi-exon	FALSE	canonical	3	2354	junction_12	204.057066527969	5258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	46	True	AATAAA	-16	NA	72332202	72342376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ENSMUSG00000040464.16_5588810_5609513_1	chr5	-	1591	10	FSM	ENSMUSG00000040464.16	ENSMUST00000115441.9	2972	10	25	1356	0	423	multi-exon	FALSE	canonical	3	193	junction_5	43.7924397331066	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGACTCTGTTTTAAAA	NA	False	NA	NA	False	AATATA	-13	NA	5609513	5588809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
ENSMUSG00000040466.17_27147403_27165412_1	chr7	+	871	5	FSM	ENSMUSG00000040466.17	ENSMUST00000037399.16	1028	5	0	157	0	3	multi-exon	FALSE	canonical	2	274	junction_1	67.0834368529222	2914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCTCTCTCTGTCTGTG	NA	False	NA	49	True	NA	NA	NA	27147402	27165412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27147622_27158680_27158846_27158987_27159078_27161991_27162121_27165144
ENSMUSG00000040466.17_27147486_27165412_1	chr7	+	788	5	FSM	ENSMUSG00000040466.17	ENSMUST00000037399.16	1028	5	83	157	0	3	multi-exon	FALSE	canonical	2	274	junction_1	67.0834368529222	2806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCTCTCTCTGTCTGTG	NA	False	NA	49	True	NA	NA	NA	27147485	27165412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27147622_27158680_27158846_27158987_27159078_27161991_27162121_27165144
ENSMUSG00000040472.16_55953334_55957364_1	chr14	-	1711	10	ISM	ENSMUSG00000040472.16	ENSMUST00000228826.2	2492	16	2269	0	226	0	3prime_fragment	FALSE	canonical	3	454	junction_9	28.5479886212845	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAGAAAAGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	55957364	55953333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956803_55956886_55956989_55957080_55957164_55957252
ENSMUSG00000040472.16_55953334_55959686_1	chr14	-	2448	17	FSM	ENSMUSG00000040472.16	ENSMUST00000227061.2	2882	17	-27	461	-27	0	multi-exon	FALSE	canonical	3	103	junction_16	117.751443064406	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAGAAAAGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	55959686	55953333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
ENSMUSG00000040472.16_55953334_55959686_2	chr14	-	2300	17	FSM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	34	-448	-27	0	multi-exon	FALSE	canonical	3	119	junction_16	115.082697847027	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAGAAAAGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	55959686	55953333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
ENSMUSG00000040472.16_55953782_55959361_1	chr14	-	1965	15	ISM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	359	0	272	0	intron_retention	FALSE	canonical	3	306	junction_12	81.9057447338596	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGCCAAGCTACCATTA	NA	False	NA	-19	True	AATAAA	-19	NA	55959361	55953781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051
ENSMUSG00000040472.16_55953782_55959686_1	chr14	-	2000	17	FSM	ENSMUSG00000040472.16	ENSMUST00000227061.2	2882	17	-27	909	-27	0	multi-exon	FALSE	canonical	3	103	junction_16	117.751443064406	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGCCAAGCTACCATTA	NA	False	NA	-19	True	AATAAA	-19	NA	55959686	55953781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
ENSMUSG00000040488.19_27004565_27010103_1	chr7	-	1604	8	ISM	ENSMUSG00000040488.19	ENSMUST00000121175.8	5118	30	22985	0	0	0	3prime_fragment	FALSE	canonical	3	513	junction_4	58.3896132781808	572	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGCCTCTGCCTGCCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	27010103	27004564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945
ENSMUSG00000040511.15_19637503_19655038_1	chr7	-	2849	7	NNC	ENSMUSG00000040511.15	novel	2905	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.8357142163028	678	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTGTCCGAGCCTTTG	9978	False	NA	-1	True	NA	NA	NA	19655038	19637502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_19639144_19643105_19643229_19644529_19644682_19648662_19648790_19650798_19651096_19652486_19652835_19654877
ENSMUSG00000040521.12_126858317_126866672_1	chr10	-	1053	6	FSM	ENSMUSG00000040521.12	ENSMUST00000040560.11	1206	6	37	116	0	0	multi-exon	FALSE	canonical	3	855	junction_5	79.6728310027954	2123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAACCCTCAAATTTGTTT	NA	False	NA	-24	True	TATAAA	-20	NA	126866672	126858316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126866612
ENSMUSG00000040528.16_106659079_106670364_1	chr11	+	1104	8	NNC	ENSMUSG00000040528.16	novel	1234	8	NA	NA	13310	10744	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGCTGTAGACCACGCC	NA	False	NA	NA	False	NA	NA	NA	106659078	106670364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106670209
ENSMUSG00000040528.16_106659079_106670364_2	chr11	+	1529	8	NIC	ENSMUSG00000040528.16	novel	1234	8	NA	NA	13310	10744	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGCTGTAGACCACGCC	NA	False	NA	NA	False	NA	NA	NA	106659078	106670364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669784
ENSMUSG00000040532.15_135038545_135041029_1	chr5	+	1392	4	NIC	ENSMUSG00000040532.15	novel	1493	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	552	junction_2	38.6637929966641	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCGTTTTCACCACCGT	NA	False	NA	15	True	AATAAA	-22	NA	135038544	135041029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_135038972_135039740_135040235_135040337_135040520_135040740
ENSMUSG00000040532.15_135038545_135041029_2	chr5	+	1072	6	NIC	ENSMUSG00000040532.15	novel	1493	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	232.107733606616	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCGTTTTCACCACCGT	NA	False	NA	15	True	AATAAA	-22	NA	135038544	135041029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_135038694_135038864_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
ENSMUSG00000040532.15_135038545_135041029_3	chr5	+	1095	6	NNC	ENSMUSG00000040532.15	novel	1493	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	221.685723491613	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCGTTTTCACCACCGT	NA	False	NA	15	True	AATAAA	-22	NA	135038544	135041029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_135038694_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040746
ENSMUSG00000040532.15_135038545_135041029_4	chr5	+	1096	6	NNC	ENSMUSG00000040532.15	novel	1493	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	221.685723491613	1414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCGTTTTCACCACCGT	NA	False	NA	15	True	AATAAA	-22	NA	135038544	135041029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_135038694_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040515_135040740
ENSMUSG00000040532.15_135038545_135041029_6	chr5	+	1243	5	FSM	ENSMUSG00000040532.15	ENSMUST00000154469.8	1473	5	235	-5	0	0	multi-exon	FALSE	canonical	3	552	junction_3	34.8926926447358	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCGTTTTCACCACCGT	NA	False	NA	15	True	AATAAA	-22	NA	135038544	135041029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
ENSMUSG00000040532.15_135038545_135041029_7	chr5	+	1070	6	NIC	ENSMUSG00000040532.15	novel	1493	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	225.356073803215	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCGTTTTCACCACCGT	NA	False	NA	15	True	AATAAA	-22	NA	135038544	135041029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_135038694_135038835_135038972_135039740_135039915_135040094_135040235_135040337_135040520_135040740
ENSMUSG00000040532.15_135038827_135041029_2	chr5	+	1110	4	NIC	ENSMUSG00000040532.15	novel	731	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	552	junction_2	38.6637929966641	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCGTTTTCACCACCGT	NA	False	NA	15	True	AATAAA	-22	NA	135038826	135041029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_135038972_135039740_135040235_135040337_135040520_135040740
ENSMUSG00000040536.16_14930676_14953031_1	chr4	-	759	5	NIC	ENSMUSG00000040536.16	novel	4922	13	NA	NA	195930	21569	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCGCGTCGCCTCGCGGC	NA	False	NA	NA	False	NA	NA	NA	14953031	14930675	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_14930775_14936440_14936540_14938483_14938558_14942199_14942276_14952620
ENSMUSG00000040549.17_91357107_91396117_1	chr2	+	1745	13	ISM	ENSMUSG00000040549.17	ENSMUST00000111338.10	6665	44	0	54892	0	601	5prime_fragment	FALSE	canonical	3	508	junction_5	46.2771691970121	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGACCGTTAAAAAAAACAC	NA	False	NA	NA	False	GGGGCT	-42	NA	91357106	91396117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965
ENSMUSG00000040549.17_91437901_91451010_1	chr2	+	1560	8	ISM	ENSMUSG00000040549.17	ENSMUST00000111337.3	6384	42	61223	-2	11468	1	3prime_fragment	FALSE	canonical	3	631	junction_1	34.5082066548033	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTCCCAAAATGCTCT	NA	False	NA	12	True	AATAAA	-17	NA	91437900	91451010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ENSMUSG00000040550.18_14809498_14826413_1	chr4	-	3092	7	FSM	ENSMUSG00000040550.18	ENSMUST00000117268.9	3266	7	174	0	-18	0	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCAAATTGTCATTTGT	5	True	NA	9	True	AATAAA	-28	NA	14826413	14809497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ENSMUSG00000040550.18_14809662_14826413_1	chr4	-	2928	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	174	155	-18	-155	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGAATGTGTCTTCACC	5	True	NA	-4	True	ATTAAA	-17	NA	14826413	14809661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ENSMUSG00000040550.18_14810046_14826413_1	chr4	-	2544	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	174	539	-18	0	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGAAGTAATGTTATC	5	True	NA	-2	True	AATAAA	-12	NA	14826413	14810045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ENSMUSG00000040557.15_134961222_134970088_2	chr5	+	1207	7	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	36.2583323756991	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGTGTGTACTGTAACA	3412	False	NA	6	True	NA	NA	NA	134961221	134970088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_134961265_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310_134969548_134969745
ENSMUSG00000040557.15_134961222_134970088_3	chr5	+	1245	7	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	42.3070784726255	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGTGTGTACTGTAACA	3412	False	NA	6	True	NA	NA	NA	134961221	134970088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_134961303_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310_134969548_134969745
ENSMUSG00000040557.15_134961222_134970088_4	chr5	+	1306	6	FSM	ENSMUSG00000040557.15	ENSMUST00000111219.8	1790	6	-5	489	0	2	multi-exon	FALSE	canonical	2	10	junction_1	38.8947297201048	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGTGTGTACTGTAACA	3412	False	NA	6	True	NA	NA	NA	134961221	134970088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_134961265_134961574_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ENSMUSG00000040557.15_134961222_134970088_5	chr5	+	1405	6	FSM	ENSMUSG00000040557.15	ENSMUST00000047196.14	2808	6	0	1403	0	2	multi-exon	FALSE	canonical	3	37	junction_1	28.2460616723819	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGTGTGTACTGTAACA	3412	False	NA	6	True	NA	NA	NA	134961221	134970088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_134961265_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ENSMUSG00000040557.15_134961222_134970088_6	chr5	+	1418	6	NNC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	0	2	intron_retention	FALSE	canonical	2	4	junction_1	41.2717821277444	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGTGTGTACTGTAACA	3412	False	NA	6	True	NA	NA	NA	134961221	134970088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_134961265_134961462_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ENSMUSG00000040557.15_134961222_134970626_2	chr5	+	1943	6	FSM	ENSMUSG00000040557.15	ENSMUST00000047196.14	2808	6	0	865	0	49	multi-exon	FALSE	canonical	3	37	junction_1	28.2460616723819	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGATCTGATTTATGG	3412	False	NA	NA	False	AATAAA	-18	NA	134961221	134970626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_134961265_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ENSMUSG00000040562.13_107889018_107893737_2	chr3	-	1030	8	NNC	ENSMUSG00000040562.13	novel	1064	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	239.244303452964	2152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCAGTGTATTATTTT	2074	False	NA	-4	True	AATAAA	-13	NA	107893737	107889017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_107889455_107891251_107891363_107891444_107891541_107892364_107892460_107892558_107892645_107892933_107892999_107893349_107893426_107893673
ENSMUSG00000040562.13_107889018_107893737_3	chr3	-	1027	8	NNC	ENSMUSG00000040562.13	novel	1064	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	239.150793519102	2148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCAGTGTATTATTTT	2074	False	NA	-4	True	AATAAA	-13	NA	107893737	107889017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_107889455_107891251_107891363_107891444_107891532_107892360_107892466_107892562_107892645_107892933_107892999_107893349_107893426_107893673
ENSMUSG00000040564.15_19423406_19426563_1	chr7	-	393	4	NNC	ENSMUSG00000040564.15	novel	432	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	542.605033355038	3608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGAAGTGCTTTGG	NA	False	NA	-4	True	AATAAA	-19	NA	19426563	19423405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_19423562_19425812_19425944_19426335_19426412_19426533
ENSMUSG00000040564.15_19423406_19426563_3	chr7	-	785	3	NIC	ENSMUSG00000040564.15	novel	432	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	965	junction_2	154.5	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGAAGTGCTTTGG	NA	False	NA	-4	True	AATAAA	-19	NA	19426563	19423405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_19423562_19425812_19426412_19426533
ENSMUSG00000040564.15_19423406_19426563_4	chr7	-	430	4	NNC	ENSMUSG00000040564.15	novel	432	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	503.263350543232	5049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGAAGTGCTTTGG	NA	False	NA	-4	True	AATAAA	-19	NA	19426563	19423405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_19423562_19425812_19425961_19426315_19426412_19426533
ENSMUSG00000040584.9_8761346_8797999_1	chr5	+	2718	15	NNC	ENSMUSG00000040584.9	novel	2705	10	NA	NA	-8473	-571	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	61.2864219073367	548	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTACATAATTTTAGCCT	NA	False	NA	NA	False	NA	NA	NA	8761345	8797999	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_8761508_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ENSMUSG00000040584.9_8783288_8798570_1	chr5	+	2284	7	NNC	ENSMUSG00000040584.9	novel	494	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	78.9460082728837	271	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGATAATGGTTATGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	8783287	8798570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_8783506_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ENSMUSG00000040591.19_91095638_91106385_1	chr2	-	1858	16	NIC	ENSMUSG00000040591.19	novel	2896	9	NA	NA	7101	9775	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCGGGCCAATCCTCGGC	9366	False	NA	NA	False	NA	NA	NA	91106385	91095637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ENSMUSG00000040591.19_91095638_91107276_1	chr2	-	2749	16	NIC	ENSMUSG00000040591.19	novel	2896	9	NA	NA	6210	9775	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCGGGCCAATCCTCGGC	8475	False	NA	NA	False	NA	NA	NA	91107276	91095637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ENSMUSG00000040596.16_166206908_166221190_1	chr1	-	1973	8	Fusion	ENSMUSG00000040596.16_ENSMUSG00000103400.3	novel	8692	5	NA	NA	-13128	-1461	multi-exon	FALSE	non_canonical	0	0	junction_1	0	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACGCGGCGGAAGGCCTG	NA	False	NA	NA	False	NA	NA	NA	166221190	166206907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr1_-_166207046_166209695_166209788_166209965_166210032_166214234_166214333_166216130_166216341_166217404_166217557_166219391_166219555_166220136
ENSMUSG00000040596.16_166206908_166221190_2	chr1	-	1968	8	Fusion	ENSMUSG00000040596.16_ENSMUSG00000103400.3	novel	8692	5	NA	NA	-13128	-1461	multi-exon	FALSE	non_canonical	0	0	junction_1	0	249	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACGCGGCGGAAGGCCTG	NA	False	NA	NA	False	NA	NA	NA	166221190	166206907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr1_-_166207046_166209695_166209788_166209965_166210032_166214234_166214333_166216135_166216341_166217404_166217557_166219391_166219555_166220136
ENSMUSG00000040599.14_70910437_70917713_1	chr11	+	2519	3	FSM	ENSMUSG00000040599.14	ENSMUST00000048807.12	3003	3	0	484	0	-484	multi-exon	FALSE	canonical	3	76	junction_1	24	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGGCACTTGTTAGATT	NA	False	NA	NA	False	NA	NA	NA	70910436	70917713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70911016_70915375_70915538_70915935
ENSMUSG00000040599.14_70910437_70917713_3	chr11	+	2053	3	FSM	ENSMUSG00000040599.14	ENSMUST00000133413.8	344	3	0	-1709	0	-484	multi-exon	FALSE	canonical	3	36	junction_1	44	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGGCACTTGTTAGATT	NA	False	NA	NA	False	NA	NA	NA	70910436	70917713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70910550_70915375_70915538_70915935
ENSMUSG00000040599.14_70910437_70918197_1	chr11	+	2537	3	FSM	ENSMUSG00000040599.14	ENSMUST00000133413.8	344	3	0	-2193	0	0	multi-exon	FALSE	canonical	3	36	junction_1	44	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTATTATTGCTTAAT	NA	False	NA	16	True	AATAAA	-37	NA	70910436	70918197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70910550_70915375_70915538_70915935
ENSMUSG00000040599.14_70910437_70918197_2	chr11	+	2721	4	FSM	ENSMUSG00000040599.14	ENSMUST00000164220.8	1416	4	0	-1305	0	0	multi-exon	FALSE	canonical	3	11	junction_1	46.3057471835	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTATTATTGCTTAAT	NA	False	NA	16	True	AATAAA	-37	NA	70910436	70918197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70910550_70910831_70911016_70915375_70915538_70915935
ENSMUSG00000040616.4_141758303_141811946_1	chr4	-	1783	3	NNC	ENSMUSG00000040616.4	novel	1875	3	NA	NA	-331	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	75.5	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGACCTCATTCAGTCA	9869	False	NA	-6	True	AATAAA	-18	NA	141811946	141758302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_141759406_141764715_141765245_141811795
ENSMUSG00000040618.8_55777723_55786391_1	chr14	+	2317	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	0	1083	0	0	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	4077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCTGTGTCTGCATAG	8891	False	NA	31	True	NA	NA	NA	55777722	55786391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUSG00000040618.8_55777846_55786329_1	chr14	+	1944	9	NIC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_4	532.016447114185	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGGACTCCCCATGCT	9014	False	NA	27	True	ATTAAA	-24	NA	55777845	55786329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUSG00000040618.8_55777846_55786329_2	chr14	+	2127	10	NNC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_9	498.785413668933	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGGACTCCCCATGCT	9014	False	NA	27	True	ATTAAA	-24	NA	55777845	55786329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785766
ENSMUSG00000040618.8_55777846_55786329_3	chr14	+	2126	10	NNC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	515.589630100012	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGGACTCCCCATGCT	9014	False	NA	27	True	ATTAAA	-24	NA	55777845	55786329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_55777971_55779868_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUSG00000040618.8_55777846_55786329_4	chr14	+	2132	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	123	1145	0	0	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	1764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGGACTCCCCATGCT	9014	False	NA	27	True	ATTAAA	-24	NA	55777845	55786329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUSG00000040618.8_55777846_55787008_1	chr14	+	2811	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	123	466	0	-273	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	3456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATGTCTTAAAATCCTA	9014	False	NA	13	True	AATACA	-19	NA	55777845	55787008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUSG00000040621.15_164953450_164972800_1	chrX	+	1441	7	NNC	ENSMUSG00000040621.15	novel	1389	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.3189337389853	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTAAGCCACGTGTCATT	NA	False	NA	NA	False	CATAAA	-2	NA	164953449	164972800	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_164953547_164959840_164959999_164960055_164960076_164961529_164961639_164961787_164961827_164963348_164963806_164972239
ENSMUSG00000040621.15_164953450_164972800_2	chrX	+	1263	5	FSM	ENSMUSG00000040621.15	ENSMUST00000087169.11	1928	5	-41	706	0	0	multi-exon	FALSE	canonical	1	1	junction_1	20.8371663140649	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTAAGCCACGTGTCATT	NA	False	NA	NA	False	CATAAA	-2	NA	164953449	164972800	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_164953547_164961529_164961639_164961787_164961827_164963348_164963806_164972239
ENSMUSG00000040621.15_164953450_164973508_1	chrX	+	2149	7	NNC	ENSMUSG00000040621.15	novel	1389	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.3189337389853	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGACTGGATTTGATCTAC	NA	False	NA	NA	False	NA	NA	NA	164953449	164973508	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_164953547_164959840_164959999_164960055_164960076_164961529_164961639_164961787_164961827_164963348_164963806_164972239
ENSMUSG00000040631.9_95584146_95590539_1	chr8	-	1172	9	NNC	ENSMUSG00000040631.9	novel	2590	9	NA	NA	7293	6310	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4805	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTGCGCGGCCACCAGC	NA	False	NA	NA	False	NA	NA	NA	95590539	95584145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588459_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ENSMUSG00000040631.9_95584146_95590539_2	chr8	-	1211	9	NNC	ENSMUSG00000040631.9	novel	2590	9	NA	NA	7293	6310	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6063	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTGCGCGGCCACCAGC	NA	False	NA	NA	False	NA	NA	NA	95590539	95584145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589407_95589513_95590079
ENSMUSG00000040631.9_95584146_95590539_3	chr8	-	1159	8	NNC	ENSMUSG00000040631.9	novel	2558	8	NA	NA	7293	6310	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTGCGCGGCCACCAGC	NA	False	NA	NA	False	NA	NA	NA	95590539	95584145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_95584270_95584374_95584425_95586871_95586941_95588307_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ENSMUSG00000040631.9_95584146_95590539_4	chr8	-	1178	8	NNC	ENSMUSG00000040631.9	novel	2558	8	NA	NA	7293	6310	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	517	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTGCGCGGCCACCAGC	NA	False	NA	NA	False	NA	NA	NA	95590539	95584145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588517_95589148_95589318_95589437_95589513_95590079
ENSMUSG00000040631.9_95584146_95590539_5	chr8	-	1171	9	NNC	ENSMUSG00000040631.9	novel	2590	9	NA	NA	7293	6310	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3523	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTGCGCGGCCACCAGC	NA	False	NA	NA	False	NA	NA	NA	95590539	95584145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_95584270_95584374_95584425_95586871_95586941_95587071_95587115_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ENSMUSG00000040631.9_95584146_95590539_6	chr8	-	1052	8	NIC	ENSMUSG00000040631.9	novel	2558	8	NA	NA	7293	6310	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTGCGCGGCCACCAGC	NA	False	NA	NA	False	NA	NA	NA	95590539	95584145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ENSMUSG00000040651.10_27204364_27230435_1	chr14	+	2963	18	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	5237	24923	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTGCCGCTGCTCAAC	NA	False	NA	NA	False	NA	NA	NA	27204363	27230435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ENSMUSG00000040652.17_65583861_65596799_1	chr9	+	1030	5	NIC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	365	junction_4	22.3983816379666	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTGCAGGGGCGGGA	4635	False	NA	NA	False	TTTAAA	-38	NA	65583860	65596799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_65584048_65593477_65593636_65595079_65595256_65596102_65596189_65596376
ENSMUSG00000040652.17_65583861_65597582_1	chr9	+	1813	5	NIC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	365	junction_4	22.3983816379666	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTCTGTCTTTTTATTC	4635	False	NA	23	True	AATAAA	-17	NA	65583860	65597582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_65584048_65593477_65593636_65595079_65595256_65596102_65596189_65596376
ENSMUSG00000040658.8_46807637_46810550_1	chr17	+	1035	5	NNC	ENSMUSG00000040658.8	novel	1190	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	279.760053438657	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCACGGTGTC	NA	False	NA	14	True	NA	NA	NA	46807636	46810550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802_46809894_46810048
ENSMUSG00000040658.8_46807637_46810550_2	chr17	+	658	5	NNC	ENSMUSG00000040658.8	novel	1190	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	278.036306082497	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCACGGTGTC	NA	False	NA	14	True	NA	NA	NA	46807636	46810550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802_46809894_46810425
ENSMUSG00000040658.8_46807637_46811015_1	chr17	+	785	5	NNC	ENSMUSG00000040658.8	novel	1190	4	NA	NA	0	465	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	285.793959873193	1833	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGGCAGTGCTAGAACCA	NA	False	NA	6	True	NA	NA	NA	46807636	46811015	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802_46810002_46810871
ENSMUSG00000040667.12_70833903_70860785_1	chr11	-	2429	17	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	231.713985537667	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860785	70833902	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847144_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUSG00000040667.12_70833903_70860785_2	chr11	-	2414	17	NNC	ENSMUSG00000040667.12	novel	2389	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	226.14538327147	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860785	70833902	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847144_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUSG00000040667.12_70833903_70860785_3	chr11	-	2428	17	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	232.556310385248	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860785	70833902	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835383_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUSG00000040667.12_70833903_70860785_4	chr11	-	2429	17	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	231.434082137874	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860785	70833902	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_70834149_70834709_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUSG00000040681.17_95922788_95928804_1	chr16	-	1050	4	NNC	ENSMUSG00000040681.17	novel	261	5	NA	NA	0	646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3210.85391895815	1658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928804	95922787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928758
ENSMUSG00000040681.17_95922788_95928929_1	chr16	-	1205	5	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	0	646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2886.14405392385	11399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928929	95922787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928758
ENSMUSG00000040681.17_95922788_95928929_2	chr16	-	1175	4	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	0	646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3210.85391895815	10850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928929	95922787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928758
ENSMUSG00000040681.17_95922788_95928929_3	chr16	-	1204	6	FSM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	0	970	0	646	multi-exon	FALSE	canonical	3	5886	junction_4	404.27841891449	11797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928929	95922787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
ENSMUSG00000040681.17_95923251_95928929_1	chr16	-	741	6	FSM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	0	1433	0	183	multi-exon	FALSE	canonical	3	5886	junction_4	404.27841891449	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCGTCTCAGTCGTGCA	NA	False	NA	-11	True	AATACA	-19	NA	95928929	95923250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
ENSMUSG00000040681.17_95923251_95928929_2	chr16	-	742	5	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	0	183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2886.14405392385	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCGTCTCAGTCGTGCA	NA	False	NA	-11	True	AATACA	-19	NA	95928929	95923250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928758
ENSMUSG00000040688.17_24919432_24926605_1	chr17	-	2688	22	FSM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	29	2509	0	0	multi-exon	FALSE	canonical	3	500	junction_14	40.675587289682	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCACTCTTAATCCTGC	NA	False	NA	-11	True	AATAGA	-34	NA	24926605	24919431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
ENSMUSG00000040688.17_24919625_24926605_1	chr17	-	2495	22	FSM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	29	2702	0	-193	multi-exon	FALSE	canonical	3	500	junction_14	40.675587289682	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCTCATGTGAATC	NA	False	NA	-24	True	NA	NA	NA	24926605	24919624	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
ENSMUSG00000040694.5_48738531_48739760_1	chr17	-	431	2	FSM	ENSMUSG00000040694.5	ENSMUST00000233707.2	317	2	-114	0	-114	0	multi-exon	FALSE	canonical	2	5	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTATTGCTCCAGGCCTG	NA	False	NA	NA	False	NA	NA	NA	48739760	48738530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_48738708_48739506
ENSMUSG00000040697.11_141489299_141517989_1	chr4	-	3957	15	FSM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	213	1799	213	-1799	multi-exon	TRUE	canonical	3	44	junction_12	6.2974727681274	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCAGGCTTCATTCTTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	141517989	141489298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
ENSMUSG00000040697.11_141491105_141517989_1	chr4	-	2151	15	FSM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	213	3605	213	-3605	multi-exon	FALSE	canonical	3	44	junction_12	6.2974727681274	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGACAAGCACTTTATG	NA	False	NA	NA	False	NA	NA	NA	141517989	141491104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
ENSMUSG00000040713.13_165591315_165601629_1	chr1	+	915	4	FSM	ENSMUSG00000040713.13	ENSMUST00000111432.10	2163	4	0	1248	0	142	multi-exon	FALSE	canonical	3	459	junction_1	24.0554914035583	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCAGAGAAAAATGCCAT	NA	False	NA	18	True	AAAAAG	-25	NA	165591314	165601629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_165591708_165597381_165597502_165598200_165598386_165601412
ENSMUSG00000040720.16_11486043_11549885_1	chr4	+	5622	24	FSM	ENSMUSG00000040720.16	ENSMUST00000059914.13	6506	24	85	799	0	-799	multi-exon	TRUE	canonical	3	55	junction_9	10.2468585254619	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTATATATTTTTCCC	19	True	NA	15	True	AATAAA	-20	NA	11486042	11549885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ENSMUSG00000040721.10_55311637_55329831_1	chr14	-	1472	2	ISM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	-50	13918	-50	389	5prime_fragment	FALSE	canonical	3	30	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAGATTCGCCAGTACC	NA	False	NA	NA	False	NA	NA	NA	55329831	55311636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_55312742_55329464
ENSMUSG00000040723.15_165476516_165484597_1	chr1	-	2530	3	NNC	ENSMUSG00000040723.15	novel	2622	7	NA	NA	51020	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	12	3313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGTTGGTTCTTATTCT	NA	False	NA	-2	True	AATAAA	-11	NA	165484597	165476515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_165477780_165482873_165483606_165484063
ENSMUSG00000040723.15_165477478_165484597_1	chr1	-	1568	3	NNC	ENSMUSG00000040723.15	novel	5001	6	NA	NA	51020	-962	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	12	3203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTGGTGTCTGCTCC	NA	False	NA	NA	False	AATATA	-11	NA	165484597	165477477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_165477780_165482873_165483606_165484063
ENSMUSG00000040723.15_165482852_165483658_1	chr1	-	291	2	NNC	ENSMUSG00000040723.15	novel	5001	6	NA	NA	51959	-6336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTATCAGGACCAGAGCT	NA	False	NA	NA	False	NA	NA	NA	165483658	165482851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_165483025_165483540
ENSMUSG00000040731.14_134648731_134668182_1	chr5	-	2408	7	FSM	ENSMUSG00000040731.14	ENSMUST00000202622.4	2726	7	162	156	-3	0	multi-exon	FALSE	canonical	3	761	junction_3	647.667803224256	2748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTATGCTTGTCTTTCTGG	2199	False	NA	-4	True	AATAAA	-18	NA	134668182	134648730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_134650503_134650802_134650941_134653294_134653355_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ENSMUSG00000040731.14_134653385_134668182_1	chr5	-	1273	4	FSM	ENSMUSG00000040731.14	ENSMUST00000200874.2	896	4	-26	-351	-3	351	multi-exon	FALSE	canonical	3	2106	junction_3	61.0482504981829	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATCTCTTTGTGTGTGT	2199	False	NA	NA	False	NA	NA	NA	134668182	134653384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_134654317_134654394_134654460_134656441_134656630_134668094
ENSMUSG00000040746.16_70538113_70542247_1	chr11	+	1297	10	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	144.752662612241	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9190	False	NA	30	True	AATAAA	-31	NA	70538112	70542247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_70538140_70538675_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUSG00000040746.16_70538113_70542247_3	chr11	+	1781	9	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	55	junction_3	157.209205757805	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9190	False	NA	30	True	AATAAA	-31	NA	70538112	70542247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_70538779_70538854_70538936_70540046_70540121_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUSG00000040746.16_70538113_70542247_4	chr11	+	1742	10	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	154.113954952532	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9190	False	NA	30	True	AATAAA	-31	NA	70538112	70542247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_70538140_70538230_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUSG00000040746.16_70538381_70542247_2	chr11	+	1565	9	FSM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	268	0	0	0	multi-exon	FALSE	canonical	3	485	junction_5	18.8244355825082	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9458	False	NA	30	True	AATAAA	-31	NA	70538380	70542247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUSG00000040749.12_162853701_162859489_1	chrX	-	1983	4	FSM	ENSMUSG00000040749.12	ENSMUST00000134272.2	803	4	0	-1180	0	0	multi-exon	FALSE	canonical	3	72	junction_3	219.75794765049	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCAGGTTTTTCTCACTT	NA	False	NA	-18	True	AATAAA	-15	NA	162859489	162853700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859182
ENSMUSG00000040767.11_32155446_32158873_1	chr11	+	679	5	FSM	ENSMUSG00000040767.11	ENSMUST00000039601.10	821	5	31	111	0	0	multi-exon	FALSE	canonical	3	400	junction_3	16.768646337734	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGATTGTGGAAAATTCCT	NA	False	NA	-90	True	NA	NA	NA	32155445	32158873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_32155664_32156959_32157051_32157556_32157663_32158333_32158409_32158684
ENSMUSG00000040767.11_32155446_32158989_1	chr11	+	778	5	NIC	ENSMUSG00000040767.11	novel	821	5	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	178.047044345027	2355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAAGCCATAGTACTCT	NA	False	NA	26	True	AATAAA	-27	NA	32155445	32158989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_32155664_32156959_32157051_32157573_32157663_32158333_32158409_32158684
ENSMUSG00000040767.11_32155446_32158989_2	chr11	+	788	5	NIC	ENSMUSG00000040767.11	novel	821	5	NA	NA	0	5	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	179.342375081853	2404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAAGCCATAGTACTCT	NA	False	NA	26	True	AATAAA	-27	NA	32155445	32158989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_32155664_32156959_32157044_32157556_32157663_32158333_32158409_32158684
ENSMUSG00000040771.15_48717042_48724283_4	chr17	+	1049	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	427.242975366477	1161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGTTTGCACACATGAA	NA	False	NA	10	True	AATAAA	-18	NA	48717041	48724283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_48717123_48717852_48717933_48718291_48718437_48721254_48721313_48722248_48722362_48723711
ENSMUSG00000040771.15_48717120_48724283_2	chr17	+	1107	6	NNC	ENSMUSG00000040771.15	novel	1135	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	391.766767350167	1638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGTTTGCACACATGAA	NA	False	NA	10	True	AATAAA	-18	NA	48717119	48724283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_48717266_48717855_48717933_48718291_48718437_48721258_48721313_48722248_48722362_48723711
ENSMUSG00000040771.15_48717272_48718658_1	chr17	+	573	3	ISM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	230	5624	152	0	5prime_fragment	FALSE	canonical	3	324	junction_1	313.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCAGTCTCTTCGCCCT	NA	False	NA	NA	False	ACTAAA	-18	NA	48717271	48718658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_48717401_48717855_48717933_48718291
ENSMUSG00000040771.15_48717272_48724283_1	chr17	+	1018	5	NIC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	152	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	427.836709504923	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGTTTGCACACATGAA	NA	False	NA	10	True	AATAAA	-18	NA	48717271	48724283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_48717401_48718291_48718437_48721253_48721313_48722248_48722362_48723711
ENSMUSG00000040774.16_106410299_106455059_1	chr3	-	2025	9	NIC	ENSMUSG00000040774.16	novel	2121	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	80.7074191137345	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTTTTTTCTCAATTTT	NA	False	NA	-5	True	AATAAA	-16	NA	106455059	106410298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505_106446913_106454995
ENSMUSG00000040795.13_129508919_129512878_1	chr4	-	2594	6	NNC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	non_canonical	3	55	junction_1	30.2747419477029	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGTACAAATATATGTA	NA	False	NA	NA	False	NA	NA	NA	129512878	129508918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_129510005_129510035_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
ENSMUSG00000040795.13_129508919_129512878_2	chr4	-	1632	7	NNC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.4975727583349	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGTACAAATATATGTA	NA	False	NA	NA	False	NA	NA	NA	129512878	129508918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_129509275_129509394_129509881_129510753_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
ENSMUSG00000040795.13_129509410_129512878_1	chr4	-	2103	6	NNC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	-5	142	at_least_one_novel_splicesite	FALSE	non_canonical	3	55	junction_1	30.2747419477029	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACGCCTTTAATCCCAG	NA	False	NA	-18	True	NA	NA	NA	129512878	129509409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_129510005_129510035_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
ENSMUSG00000040811.16_18915257_18940405_1	chr7	+	2223	19	NIC	ENSMUSG00000040811.16	novel	596	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	28.4707452191426	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	23	True	AATACA	-15	NA	18915256	18940405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_18915281_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ENSMUSG00000040811.16_18936305_18940405_1	chr7	+	839	4	ISM	ENSMUSG00000040811.16	ENSMUST00000048502.10	2275	19	21176	-1	20774	1	3prime_fragment	FALSE	canonical	3	145	junction_1	10.2306728354819	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	23	True	AATACA	-15	NA	18936304	18940405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_18936522_18936901_18936998_18937826_18937958_18940010
ENSMUSG00000040813.17_106535951_106563104_1	chr9	-	1581	6	FSM	ENSMUSG00000040813.17	ENSMUST00000169068.8	1364	6	-223	6	-2	0	multi-exon	FALSE	canonical	3	151	junction_5	120.179865202121	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGAGTTGGTTTT	7890	False	NA	-6	True	AATAAA	-22	NA	106563104	106535950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562833
ENSMUSG00000040822.8_54923694_54928198_2	chr14	+	1439	3	FSM	ENSMUSG00000040822.8	ENSMUST00000228027.2	811	3	0	-628	0	0	multi-exon	FALSE	canonical	3	26	junction_1	179.5	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACTGGTGATTCACAT	NA	False	NA	NA	False	AATAAA	-26	NA	54923693	54928198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_54924111_54924493_54924578_54927260
ENSMUSG00000040824.4_18883784_18886651_1	chr7	+	467	3	FSM	ENSMUSG00000040824.4	ENSMUST00000049294.4	1420	3	137	816	0	-816	multi-exon	FALSE	canonical	3	3249	junction_1	86	22790	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTTTTCCAGTGGTCT	NA	False	NA	1	True	AATAAA	-19	NA	18883783	18886651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_18883820_18885142_18885323_18886400
ENSMUSG00000040840.8_54889174_54902804_1	chr14	+	1453	4	NIC	ENSMUSG00000040840.8	novel	968	6	NA	NA	1206	10740	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	470	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGGGTTTCTCATCCAC	5591	False	NA	NA	False	NA	NA	NA	54889173	54902804	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_54889316_54899624_54899741_54901043_54901263_54901828
ENSMUSG00000040842.18_140842624_140867077_1	chr4	-	932	4	FSM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	0	2312	0	1254	multi-exon	FALSE	canonical	3	169	junction_2	126.792043213374	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTTTTTTTTTTTTT	NA	False	NA	-19	True	NA	NA	NA	140867077	140842623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_140843176_140845837_140846093_140847634_140847685_140867002
ENSMUSG00000040843.11_165042491_165064491_1	chr1	-	1723	7	FSM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	21	2636	0	660	multi-exon	FALSE	canonical	3	508	junction_2	54.8414381041684	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGTTTGCTGTTTATT	NA	False	NA	-5	True	AATAAA	-18	NA	165064491	165042490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
ENSMUSG00000040843.11_165043151_165064491_1	chr1	-	1063	7	FSM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	21	3296	0	0	multi-exon	FALSE	canonical	3	508	junction_2	54.8414381041684	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTATCCTGTCTGT	NA	False	NA	-1	True	AATAAA	-28	NA	165064491	165043150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
ENSMUSG00000040843.11_165043295_165064491_1	chr1	-	919	7	FSM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	21	3440	0	0	multi-exon	FALSE	canonical	3	508	junction_2	54.8414381041684	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTCTCCATGTGGAACC	NA	False	NA	NA	False	AATAAA	-14	NA	165064491	165043294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
ENSMUSG00000040859.15_129355477_129382291_2	chr4	+	2690	12	NNC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	36.0511574074013	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGAAGTGTCCGGGGATGT	NA	False	NA	64	True	ATTAAA	-15	NA	129355476	129382291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_129355499_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833_129381332_129381361
ENSMUSG00000040877.17_108860198_108994378_1	chr12	+	2669	7	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.6713610367747	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCGTGGTCATGGTG	4850	False	NA	NA	False	NA	NA	NA	108860197	108994378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_108860252_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
ENSMUSG00000040877.17_108981571_108994378_1	chr12	+	1643	4	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-5157	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	28.3313724811677	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCGTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	108981570	108994378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_108981695_108990888_108991060_108992335_108992477_108993171
ENSMUSG00000040883.19_21832309_21838648_1	chr9	-	671	4	FSM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	110	4	-64	0	multi-exon	FALSE	canonical	3	136	junction_3	45.9879211194514	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATGGCCATGGTCATT	NA	False	NA	-10	True	AATAAA	-9	NA	21838648	21832308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838587
ENSMUSG00000040883.19_21832309_21838648_2	chr9	-	676	4	FSM	ENSMUSG00000040883.19	ENSMUST00000238930.2	862	4	183	3	-64	0	multi-exon	FALSE	canonical	3	48	junction_3	87.3473271231327	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATGGCCATGGTCATT	NA	False	NA	-10	True	AATAAA	-9	NA	21838648	21832308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838582
ENSMUSG00000040883.19_21832309_21838648_4	chr9	-	1288	4	FSM	ENSMUSG00000040883.19	ENSMUST00000214569.2	879	4	-329	-80	-64	0	multi-exon	FALSE	canonical	3	12	junction_3	104.295520304352	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATGGCCATGGTCATT	NA	False	NA	-10	True	AATAAA	-9	NA	21838648	21832308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21837970
ENSMUSG00000040883.19_21832309_21838852_1	chr9	-	807	4	NNC	ENSMUSG00000040883.19	novel	862	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	109.946451612693	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATGGCCATGGTCATT	NA	False	NA	-10	True	AATAAA	-9	NA	21838852	21832308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_21832646_21837286_21837451_21837544_21837654_21838655
ENSMUSG00000040907.16_24677592_24686624_1	chr7	-	1251	8	NNC	ENSMUSG00000040907.16	novel	3621	23	NA	NA	18696	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	17.1499985125245	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGTGTGTTATGCTT	NA	False	NA	-1	True	AATATA	-18	NA	24686624	24677591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686533
ENSMUSG00000040918.13_164076822_164092938_1	chr1	+	3348	6	FSM	ENSMUSG00000040918.13	ENSMUST00000044021.12	3571	6	207	16	0	0	multi-exon	FALSE	canonical	3	256	junction_3	19.417517864032	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTTTCACTCAGAA	NA	False	NA	13	True	AATAAA	-15	NA	164076821	164092938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ENSMUSG00000040928.16_129041798_129083372_1	chr4	-	4293	7	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	119	junction_6	30.1482448355898	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1151	False	NA	-5	True	AATAAA	-15	NA	129083372	129041797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083334
ENSMUSG00000040935.13_140454666_140458437_1	chr4	-	903	4	ISM	ENSMUSG00000040935.13	ENSMUST00000038749.11	2333	16	11517	0	1917	0	intron_retention	FALSE	canonical	3	19	junction_1	1.24721912892465	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTTACGCCGCCTGAC	NA	False	NA	NA	False	AATAAA	-19	NA	140458437	140454665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_140455121_140456177_140456340_140457019_140457091_140458222
ENSMUSG00000040936.16_120793520_120821091_1	chr9	-	366	3	NNC	ENSMUSG00000040936.16	novel	4103	37	NA	NA	-31518	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	6.5	46	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGTGTCAAACCCTCT	NA	False	NA	-1	True	AATAAA	-16	NA	120821091	120793519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_120793675_120795462_120795549_120820966
ENSMUSG00000040943.13_133191963_133212443_1	chr3	-	2586	2	NNC	ENSMUSG00000040943.13	novel	423	3	NA	NA	-26000	2333	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_1	0	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACGTTCACCGGTGCTTT	NA	False	NA	NA	False	NA	NA	NA	133212443	133191962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_133194479_133212373
ENSMUSG00000040943.13_133191963_133250063_1	chr3	-	2764	3	ISM	ENSMUSG00000040943.13	ENSMUST00000196398.5	9021	12	66	22363	0	2333	5prime_fragment	FALSE	canonical	3	102	junction_2	6	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACGTTCACCGGTGCTTT	NA	False	NA	NA	False	NA	NA	NA	133250063	133191962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_133194479_133219789_133219935_133249960
ENSMUSG00000040943.13_133193183_133212443_1	chr3	-	1366	2	NNC	ENSMUSG00000040943.13	novel	423	3	NA	NA	-26000	1113	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGCAACCGAACTCTTT	NA	False	NA	NA	False	NA	NA	NA	133212443	133193182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_133194479_133212373
ENSMUSG00000040943.13_133193183_133250063_1	chr3	-	1544	3	ISM	ENSMUSG00000040943.13	ENSMUST00000196398.5	9021	12	66	23583	0	1113	5prime_fragment	FALSE	canonical	3	102	junction_2	6	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGCAACCGAACTCTTT	NA	False	NA	NA	False	NA	NA	NA	133250063	133193182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_133194479_133219789_133219935_133249960
ENSMUSG00000040943.13_133193628_133212443_1	chr3	-	921	2	NNC	ENSMUSG00000040943.13	novel	423	3	NA	NA	-26000	668	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCAGCTGCCTCCAGAG	NA	False	NA	NA	False	NA	NA	NA	133212443	133193627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_133194479_133212373
ENSMUSG00000040943.13_133193628_133250063_1	chr3	-	1099	3	ISM	ENSMUSG00000040943.13	ENSMUST00000196398.5	9021	12	66	24028	0	668	5prime_fragment	FALSE	canonical	3	102	junction_2	6	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCAGCTGCCTCCAGAG	NA	False	NA	NA	False	NA	NA	NA	133250063	133193627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_133194479_133219789_133219935_133249960
ENSMUSG00000040945.14_140429686_140448780_1	chr4	+	1610	12	ISM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	902	1751	902	-1751	3prime_fragment	FALSE	canonical	3	3313	junction_1	471.181177976518	1655	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTTGTATTTCTT	3283	False	NA	12	True	NA	NA	NA	140429685	140448780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ENSMUSG00000040945.14_140431216_140448725_1	chr4	+	1541	12	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	2432	-1806	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	1322.08953698365	1371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTGCCTTTCTACGA	4813	False	NA	26	True	ATTAAA	-14	NA	140431215	140448725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_140431263_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ENSMUSG00000040950.14_70026977_70028376_1	chr11	+	1220	3	ISM	ENSMUSG00000040950.14	ENSMUST00000108584.2	1307	8	1978	-255	1978	0	3prime_fragment	FALSE	canonical	1	4	junction_1	0	1203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTTAGCTCCATTTCT	142	False	NA	NA	False	NA	NA	NA	70026976	70028376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_70027164_70027266_70027419_70027495
ENSMUSG00000040952.17_24584061_24589231_1	chr7	+	509	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108430.10	774	6	265	0	0	0	multi-exon	FALSE	canonical	3	8873	junction_5	7497.54368843557	190862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584060	24589231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ENSMUSG00000040952.17_24584238_24589231_1	chr7	+	534	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108429.8	633	6	99	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	10447.7852504729	134538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584237	24589231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_24584295_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ENSMUSG00000040963.16_69986920_69997013_1	chr11	+	1173	8	NNC	ENSMUSG00000040963.16	novel	672	5	NA	NA	-1598	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	15.9885162870488	95	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTAGCCTGGTTGTTT	5392	False	NA	NA	False	AAAAAG	-15	NA	69986919	69997013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_69987005_69987627_69987745_69988004_69988101_69988645_69988718_69988878_69988966_69989053_69989200_69996201_69996309_69996550
ENSMUSG00000040972.9_139754157_139762247_1	chr4	-	1137	5	ISM	ENSMUSG00000040972.9	ENSMUST00000039331.9	1979	10	211848	0	211848	0	3prime_fragment	FALSE	canonical	3	64	junction_3	15.3195136998535	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGCCCTATATTTTTC	NA	False	NA	1	True	ATTAAA	-28	NA	139762247	139754156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_139754390_139755034_139755074_139755359_139755553_139756008_139756095_139761661
ENSMUSG00000040997.15_54496689_54505828_1	chr14	+	1608	7	FSM	ENSMUSG00000040997.15	ENSMUST00000041197.13	2401	7	0	793	0	293	multi-exon	FALSE	canonical	3	303	junction_1	38.1200588783502	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGGCAGATGAGGCAAG	NA	False	NA	NA	False	NA	NA	NA	54496688	54505828	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ENSMUSG00000040997.15_54496736_54506351_1	chr14	+	2084	7	FSM	ENSMUSG00000040997.15	ENSMUST00000041197.13	2401	7	47	270	0	-181	multi-exon	FALSE	canonical	3	303	junction_1	38.1200588783502	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTCATCTGTCACCA	NA	False	NA	NA	False	NA	NA	NA	54496735	54506351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ENSMUSG00000041028.17_36842445_36857252_1	chr14	-	2835	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-43	396	-23	336	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	14293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTCTTTAGTCTCCAT	NA	False	NA	-8	True	AGTAAA	-20	NA	36857252	36842444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ENSMUSG00000041028.17_36842781_36857252_1	chr14	-	2499	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-43	732	-23	0	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	13949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTATTGCTGTACTT	NA	False	NA	-18	True	AATAAA	-11	NA	36857252	36842780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ENSMUSG00000041028.17_36843905_36857252_1	chr14	-	1375	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-43	1856	-23	-1124	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	9516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTCATCTCTTATGC	NA	False	NA	-35	True	AATAAA	-21	NA	36857252	36843904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ENSMUSG00000041035.10_45549074_45566193_1	chr19	+	898	7	FSM	ENSMUSG00000041035.10	ENSMUST00000235805.2	687	7	0	-211	0	211	multi-exon	FALSE	canonical	2	7	junction_1	211.143447815829	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGACTGACTGCCCCTTT	3712	False	NA	13	True	AGTAAA	-20	NA	45549073	45566193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_45549147_45549425_45549524_45553349_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
ENSMUSG00000041057.11_71923210_71964973_1	chr17	+	2393	18	ISM	ENSMUSG00000041057.11	ENSMUST00000234560.2	2410	19	320	-189	0	0	3prime_fragment	FALSE	canonical	2	2	junction_11	379.588823255486	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGATTTAGGTGAATAC	NA	False	NA	100	True	AATATA	-28	NA	71923209	71964973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955771_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ENSMUSG00000041064.15_65496078_65503249_1	chr9	+	2704	11	ISM	ENSMUSG00000041064.15	ENSMUST00000131483.3	3309	13	1575	0	1570	0	3prime_fragment	FALSE	canonical	3	64	junction_5	27.7805687486776	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTCCTGCCTGGTCT	NA	False	NA	27	True	AATAAA	-17	NA	65496077	65503249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ENSMUSG00000041084.9_130489790_130503074_1	chr3	-	819	4	FSM	ENSMUSG00000041084.9	ENSMUST00000043937.9	1067	4	19	229	-9	-222	multi-exon	FALSE	canonical	3	1781	junction_1	135.7063823931	1832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATCATCAGCTTTTGGAC	NA	False	NA	-3	True	AATAAA	-19	NA	130503074	130489789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_130490128_130496964_130497163_130499598_130499693_130502885
ENSMUSG00000041126.17_6378138_6394394_1	chr11	-	675	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	49	909	-42	0	multi-exon	FALSE	canonical	3	3133	junction_4	74.0485482639599	2404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTGTCTCAGTATTTC	NA	False	NA	-3	True	GATAAA	-16	NA	6394394	6378137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
ENSMUSG00000041130.11_24898761_24900990_1	chr17	+	1723	4	ISM	ENSMUSG00000041130.11	ENSMUST00000234988.2	3285	9	2645	-124	2645	0	3prime_fragment	FALSE	canonical	3	262	junction_2	129.740767173108	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	2142	False	NA	12	True	AATAAA	-20	NA	24898760	24900990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_24899250_24899597_24899773_24899854_24900006_24900082
ENSMUSG00000041130.11_24899035_24900990_1	chr17	+	1449	4	ISM	ENSMUSG00000041130.11	ENSMUST00000234988.2	3285	9	2919	-124	2919	0	3prime_fragment	FALSE	canonical	3	262	junction_2	129.740767173108	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	2416	False	NA	12	True	AATAAA	-20	NA	24899034	24900990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_24899250_24899597_24899773_24899854_24900006_24900082
ENSMUSG00000041130.11_24899217_24900990_1	chr17	+	1267	4	ISM	ENSMUSG00000041130.11	ENSMUST00000234988.2	3285	9	3101	-124	3101	0	3prime_fragment	FALSE	canonical	3	262	junction_2	129.740767173108	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	2598	False	NA	12	True	AATAAA	-20	NA	24899216	24900990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_24899250_24899597_24899773_24899854_24900006_24900082
ENSMUSG00000041133.12_150799424_150844796_1	chrX	+	3791	25	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	0	-894	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	183.87833764627	718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAATAGCAGGAACTCTA	NA	False	NA	NA	False	NA	NA	NA	150799423	150844796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811042_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ENSMUSG00000041133.12_150799424_150844796_2	chrX	+	3797	25	FSM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	0	894	0	-894	multi-exon	FALSE	canonical	3	535	junction_3	101.202320735358	1463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAATAGCAGGAACTCTA	NA	False	NA	NA	False	NA	NA	NA	150799423	150844796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ENSMUSG00000041133.12_150799424_150844966_1	chrX	+	3967	25	FSM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	0	724	0	-724	multi-exon	FALSE	canonical	3	535	junction_3	101.202320735358	2174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCTAATCTAAATTTGA	NA	False	NA	17	True	AATAAA	-21	NA	150799423	150844966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ENSMUSG00000041133.12_150799424_150844966_2	chrX	+	3961	25	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	0	-724	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	183.87833764627	1894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCTAATCTAAATTTGA	NA	False	NA	17	True	AATAAA	-21	NA	150799423	150844966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811042_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ENSMUSG00000041164.16_6339074_6353854_1	chr11	+	2603	18	ISM	ENSMUSG00000041164.16	ENSMUST00000109787.8	4116	20	0	2304	0	-2076	5prime_fragment	TRUE	canonical	3	65	junction_1	75.6184192424023	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGTTCACCCAGGGG	4623	False	NA	NA	False	NA	NA	NA	6339073	6353854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785
ENSMUSG00000041189.10_69674862_69675983_1	chr11	-	834	2	ISM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	10786	0	8663	0	3prime_fragment	FALSE	canonical	3	28	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTGTCTATTTTTAA	9568	False	NA	-2	True	ATTAAA	-24	NA	69675983	69674861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_69675588_69675875
ENSMUSG00000041219.15_113661840_113679057_1	chr2	-	4554	13	NNC	ENSMUSG00000041219.15	novel	4458	14	NA	NA	-51	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	109.963219861107	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTCTTGTCTGCGTGTT	5961	False	NA	-7	True	ATTAAA	-14	NA	113679057	113661839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_113662664_113663174_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ENSMUSG00000041220.11_129326035_129427999_1	chr3	+	1806	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	0	4145	0	-602	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACGGAGGAGTAAATGCAG	NA	False	NA	NA	False	NA	NA	NA	129326034	129427999	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
ENSMUSG00000041220.11_129326035_129428768_1	chr3	+	2575	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	0	3376	0	148	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAAAGACGCAATTACAT	NA	False	NA	6	True	AATAAA	-20	NA	129326034	129428768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
ENSMUSG00000041225.17_6025217_6135935_1	chr18	-	4102	19	FSM	ENSMUSG00000041225.17	ENSMUST00000182559.8	4265	19	163	0	0	0	multi-exon	FALSE	canonical	3	72	junction_11	38.5140666943045	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	12	True	NA	-23	True	AATAAA	-14	NA	6135935	6025216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ENSMUSG00000041225.17_6025217_6135935_2	chr18	-	3961	18	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_14	38.8663756441135	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	12	True	NA	-23	True	AATAAA	-14	NA	6135935	6025216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ENSMUSG00000041236.9_18901456_19050981_1	chr13	+	3181	30	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	3	298	junction_29	71.5253046363968	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATTGTGTTGCAAGC	NA	False	NA	23	True	AATAAA	-22	NA	18901455	19050981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289_19050795_19050816
ENSMUSG00000041236.9_19026329_19050981_1	chr13	+	1603	11	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	-2704	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	170.978244230077	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATTGTGTTGCAAGC	NA	False	NA	23	True	AATAAA	-22	NA	19026328	19050981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_19026451_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ENSMUSG00000041238.17_11790465_11876059_1	chr18	+	3354	19	FSM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	-21	-124	0	124	multi-exon	FALSE	canonical	3	177	junction_1	21.3625378803961	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTAGTCTATAATTT	3270	False	NA	9	True	NA	NA	NA	11790464	11876059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ENSMUSG00000041238.17_11790899_11875941_1	chr18	+	3083	19	NIC	ENSMUSG00000041238.17	novel	781	8	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	44.3982051133146	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAATGTGGATGTGTTAC	3704	False	NA	15	True	ATTAAA	-37	NA	11790898	11875941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ENSMUSG00000041241.13_138161988_138167214_1	chr4	+	1365	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	6	2362	0	892	multi-exon	FALSE	canonical	3	201	junction_3	1.24721912892465	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGGCCAGTCCTCTCCG	NA	False	NA	14	True	NA	NA	NA	138161987	138167214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
ENSMUSG00000041245.14_150076220_150108080_1	chrX	+	616	4	Genic_Genomic	ENSMUSG00000041245.14	novel	5253	22	NA	NA	-1296	4932	multi-exon	FALSE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTCCTCCAACAAGGCC	NA	False	NA	NA	False	NA	NA	NA	150076219	150108080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chrX_+_150076491_150076760_150076884_150078466_150078569_150107960
ENSMUSG00000041261.10_8145276_8239041_1	chr4	-	1939	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	0	1914	0	-1914	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCACTCTCAATTTGG	-1	True	NA	NA	False	AATAAA	-19	NA	8239041	8145275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
ENSMUSG00000041261.10_8145754_8239041_1	chr4	-	1461	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	0	2392	0	-2392	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTCGTGTTGTTTTTGC	-1	True	NA	NA	False	CATAAA	-3	NA	8239041	8145753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
ENSMUSG00000041261.10_8145878_8239041_1	chr4	-	1337	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	0	2516	0	-2516	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATTTATTTCCTGTCT	-1	True	NA	NA	False	AAGAAA	-18	NA	8239041	8145877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
ENSMUSG00000041264.17_149121476_149152244_1	chr5	+	3482	8	FSM	ENSMUSG00000041264.17	ENSMUST00000121416.8	3792	8	316	-6	0	0	multi-exon	FALSE	canonical	3	149	junction_1	82.9762690441658	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121475	149152244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUSG00000041264.17_149121476_149152244_2	chr5	+	3651	9	FSM	ENSMUSG00000041264.17	ENSMUST00000050472.16	3757	9	106	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	75.8798392196504	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121475	149152244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUSG00000041264.17_149121591_149152244_1	chr5	+	3036	10	FSM	ENSMUSG00000041264.17	ENSMUST00000100410.10	3148	10	115	-3	0	0	multi-exon	FALSE	canonical	3	110	junction_9	101.142119787266	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121590	149152244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ENSMUSG00000041264.17_149121591_149152244_2	chr5	+	3367	8	FSM	ENSMUSG00000041264.17	ENSMUST00000121416.8	3792	8	431	-6	0	0	multi-exon	FALSE	canonical	3	149	junction_1	82.9762690441658	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121590	149152244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUSG00000041278.11_43620836_43638825_1	chr11	-	1453	8	NNC	ENSMUSG00000041278.11	novel	1965	8	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	329.479614432412	2510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGGGGACTATGTTGT	NA	False	NA	-10	True	AATAAA	-12	NA	43638825	43620835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_43621435_43627241_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632644_43635911_43636275_43638748
ENSMUSG00000041278.11_43620836_43638825_3	chr11	-	1450	8	NNC	ENSMUSG00000041278.11	novel	1965	8	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	329.479614432412	1670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGGGGACTATGTTGT	NA	False	NA	-10	True	AATAAA	-12	NA	43638825	43620835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_43621435_43627241_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632641_43635911_43636275_43638748
ENSMUSG00000041287.6_69545830_69547553_1	chr11	+	1171	2	FSM	ENSMUSG00000041287.6	ENSMUST00000047373.6	861	2	-310	0	-310	0	multi-exon	FALSE	canonical	3	116	junction_1	0	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTCCCATTTGTAT	NA	False	NA	24	True	ATTAAA	-17	NA	69545829	69547553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69546726_69547278
ENSMUSG00000041287.6_69547523_69553416_1	chr11	+	1262	7	NNC	ENSMUSG00000041287.6	novel	861	2	NA	NA	1383	5863	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCGGGACAACCCCCG	NA	False	NA	NA	False	NA	NA	NA	69547522	69553416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_69548155_69548245_69548357_69548550_69548670_69548768_69548848_69549391_69549525_69549636_69549703_69553294
ENSMUSG00000041287.6_69547523_69553416_2	chr11	+	1304	7	NIC	ENSMUSG00000041287.6	novel	861	2	NA	NA	1383	5863	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCGGGACAACCCCCG	NA	False	NA	NA	False	NA	NA	NA	69547522	69553416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_69548155_69548245_69548357_69548550_69548670_69548761_69548883_69549391_69549525_69549636_69549703_69553294
ENSMUSG00000041287.6_69547523_69553416_3	chr11	+	1260	7	NNC	ENSMUSG00000041287.6	novel	861	2	NA	NA	1383	5863	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCGGGACAACCCCCG	NA	False	NA	NA	False	NA	NA	NA	69547522	69553416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_69548155_69548245_69548357_69548559_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
ENSMUSG00000041287.6_69547523_69553416_4	chr11	+	1260	7	NNC	ENSMUSG00000041287.6	novel	861	2	NA	NA	1383	5863	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCGGGACAACCCCCG	NA	False	NA	NA	False	NA	NA	NA	69547522	69553416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_69548155_69548245_69548348_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
ENSMUSG00000041287.6_69547523_69553416_5	chr11	+	1264	7	NNC	ENSMUSG00000041287.6	novel	861	2	NA	NA	1383	5863	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCGGGACAACCCCCG	NA	False	NA	NA	False	NA	NA	NA	69547522	69553416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_69548155_69548245_69548357_69548550_69548670_69548761_69548848_69549391_69549520_69549636_69549703_69553294
ENSMUSG00000041287.6_69547523_69553416_6	chr11	+	1258	7	NNC	ENSMUSG00000041287.6	novel	861	2	NA	NA	1383	5863	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCGGGACAACCCCCG	NA	False	NA	NA	False	NA	NA	NA	69547522	69553416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_69548155_69548245_69548357_69548550_69548670_69548761_69548848_69549391_69549525_69549647_69549703_69553294
ENSMUSG00000041287.6_69547523_69553416_7	chr11	+	995	8	NNC	ENSMUSG00000041287.6	novel	861	2	NA	NA	1383	5863	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCGGGACAACCCCCG	NA	False	NA	NA	False	NA	NA	NA	69547522	69553416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_69547611_69547884_69548155_69548245_69548357_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
ENSMUSG00000041303.8_54436736_54478130_1	chr1	-	3009	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	0	1573	0	-1573	multi-exon	FALSE	canonical	3	130	junction_11	22.8358062796764	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAATATTGCCTTCTGA	6700	False	NA	-3	True	AATAAA	-20	NA	54478130	54436735	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ENSMUSG00000041313.15_148264220_148266772_1	chr5	-	2525	2	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	12767	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGTGTGGTCTCAAGC	NA	False	NA	-3	True	AATAAA	-20	NA	148266772	148264219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_148266658_148266685
ENSMUSG00000041313.15_148265126_148266832_2	chr5	-	1679	2	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	12707	-906	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCAGCTGGTTTTCACC	NA	False	NA	-4	True	NA	NA	NA	148266832	148265125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_148266658_148266685
ENSMUSG00000041313.15_148266718_148336616_1	chr5	-	4583	13	FSM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	98	2498	-15	-2498	multi-exon	TRUE	canonical	3	299	junction_1	51.9975293216472	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAACACACACACACACA	5516	False	NA	NA	False	AAAACA	-15	NA	148336616	148266717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ENSMUSG00000041323.7_105727649_105748706_1	chr12	+	1631	6	ISM	ENSMUSG00000041323.7	ENSMUST00000040876.7	3099	18	55414	0	16115	0	3prime_fragment	FALSE	canonical	3	37	junction_2	5.54977477020464	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTTTCTTTTATTGG	NA	False	NA	NA	False	AATAAA	-40	NA	105727648	105748706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_105727856_105730211_105730281_105732812_105733011_105734788_105735010_105747108_105747268_105747929
ENSMUSG00000041323.7_105727649_105748706_2	chr12	+	1562	5	NIC	ENSMUSG00000041323.7	novel	3099	18	NA	NA	16115	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	14.2653426176871	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTTTCTTTTATTGG	NA	False	NA	NA	False	AATAAA	-40	NA	105727648	105748706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_105727856_105732812_105733011_105734788_105735010_105747108_105747268_105747929
ENSMUSG00000041328.17_92293870_92307093_1	chr7	-	1489	9	ISM	ENSMUSG00000041328.17	ENSMUST00000151177.2	4731	13	5652	402	5652	-402	3prime_fragment	FALSE	canonical	3	164	junction_7	31.850971335267	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGAAGAACAAATTGATG	NA	False	NA	NA	False	NA	NA	NA	92307093	92293869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515
ENSMUSG00000041346.12_69452585_69454510_1	chr11	-	1093	5	ISM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	15640	0	238	0	intron_retention	FALSE	canonical	3	153	junction_4	13.7908484148003	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTCATTGTGTCTGTT	NA	False	NA	-4	True	TATAAA	-15	NA	69454510	69452584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129
ENSMUSG00000041346.12_69452585_69454510_2	chr11	-	983	6	ISM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	15640	0	238	0	3prime_fragment	FALSE	canonical	3	116	junction_5	25.3092868330975	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTCATTGTGTCTGTT	NA	False	NA	-4	True	TATAAA	-15	NA	69454510	69452584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372
ENSMUSG00000041346.12_69452585_69470150_1	chr11	-	2001	9	NIC	ENSMUSG00000041346.12	novel	1891	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	103	junction_5	30.2321745000256	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTCATTGTGTCTGTT	NA	False	NA	-4	True	TATAAA	-15	NA	69470150	69452584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
ENSMUSG00000041353.13_149191574_149242147_1	chrX	-	1201	3	NNC	ENSMUSG00000041353.13	novel	1316	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	131	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGACTTGAGAGGTATT	NA	False	NA	NA	False	GATAAA	-21	NA	149242147	149191573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_149192597_149203337_149203432_149242063
ENSMUSG00000041353.13_149192309_149242147_2	chrX	-	466	3	NNC	ENSMUSG00000041353.13	novel	1316	3	NA	NA	-1	-142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	131	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTCTTGGCTTTTGTTTG	NA	False	NA	NA	False	TATAAA	-22	NA	149242147	149192308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_149192597_149203337_149203432_149242063
ENSMUSG00000041355.14_88486948_88495726_1	chr3	+	1020	6	NNC	ENSMUSG00000041355.14	novel	1059	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	1868.97280879097	18853	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTCTTGCGTCAA	3590	False	NA	15	True	AATAAA	-17	NA	88486947	88495726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_88486994_88487186_88487342_88488280_88488380_88491089_88491193_88494171_88494250_88495187
ENSMUSG00000041359.15_105183009_105188975_2	chr12	-	1206	3	FSM	ENSMUSG00000041359.15	ENSMUST00000175652.2	535	3	77	-748	0	0	multi-exon	FALSE	canonical	3	551	junction_2	399	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCTCTTGGAATTATG	NA	False	NA	-2	True	AATAAA	-23	NA	105188975	105183008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_105183961_105184481_105184552_105188791
ENSMUSG00000041359.15_105183009_105188975_3	chr12	-	1239	5	NNC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	843.075730584151	1940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCTCTTGGAATTATG	NA	False	NA	-2	True	AATAAA	-23	NA	105188975	105183008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_105183179_105183202_105183321_105183364_105183961_105184917_105185089_105188791
ENSMUSG00000041359.15_105183009_105188975_4	chr12	-	1309	6	NNC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	829.202846111855	3889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCTCTTGGAATTATG	NA	False	NA	-2	True	AATAAA	-23	NA	105188975	105183008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_105183179_105183202_105183321_105183364_105183961_105184481_105184552_105184917_105185089_105188791
ENSMUSG00000041360.9_27367461_27407220_1	chr19	-	2098	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	363.11010464718	1071	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407220	27367460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407196
ENSMUSG00000041360.9_27367461_27407220_2	chr19	-	2101	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	365.07735351353	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407220	27367460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389657_27393281_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ENSMUSG00000041360.9_27367461_27407264_1	chr19	-	2142	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_7	334.347259545219	1754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407264	27367460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393335_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ENSMUSG00000041360.9_27367461_27407264_2	chr19	-	2144	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	364.913612566972	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407264	27367460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398865_27399750_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ENSMUSG00000041360.9_27367461_27407264_3	chr19	-	2142	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	365.264951000046	1309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407264	27367460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396269_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ENSMUSG00000041360.9_27367461_27407264_4	chr19	-	2142	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_14	361.863171678607	1838	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407264	27367460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400977_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ENSMUSG00000041415.11_104657702_104673274_1	chr12	-	3628	13	ISM	ENSMUSG00000041415.12	ENSMUST00000222528.2	4724	21	15037	15	6013	0	3prime_fragment	FALSE	canonical	3	228	junction_7	32.052041016655	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAACTCTTTGGAACTA	NA	False	NA	-41	True	AATAAA	-14	NA	104673274	104657701	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111
ENSMUSG00000041431.17_100915700_100923007_1	chr13	-	1876	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	71	542	-13	417	multi-exon	FALSE	canonical	3	2476	junction_6	457.563588477055	4513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCCCCAAGTCTCACTA	NA	False	NA	2	True	ATTAAA	-19	NA	100923007	100915699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ENSMUSG00000041431.17_100916117_100923007_1	chr13	-	1459	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	71	959	-13	0	multi-exon	FALSE	canonical	3	2476	junction_6	457.563588477055	3363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACTTGCTCTTCAATA	NA	False	NA	-50	True	NA	NA	NA	100923007	100916116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ENSMUSG00000041444.15_32007166_32157325_1	chr9	+	1301	13	NNC	ENSMUSG00000041444.15	novel	540	6	NA	NA	-20266	46	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	9.04003441488041	40	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTCACCTACCAGCTATA	NA	False	NA	NA	False	NA	NA	NA	32007165	32157325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_32007215_32040865_32040975_32063217_32063310_32064335_32064421_32081385_32081473_32093137_32093276_32097624_32097718_32098929_32099053_32101279_32101358_32119479_32119562_32150557_32150708_32156447_32156551_32157213
ENSMUSG00000041449.17_104214164_104219928_1	chr12	+	1306	5	NIC	ENSMUSG00000041449.17	novel	1226	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	10.7325439668328	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAGAACTTCTCAAATGG	NA	False	NA	NA	False	NA	NA	NA	104214163	104219928	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_104214232_104216398_104217017_104217730_104218005_104218943_104219095_104219733
ENSMUSG00000041449.17_104214164_104220666_1	chr12	+	2044	5	NIC	ENSMUSG00000041449.17	novel	1239	4	NA	NA	0	738	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	10.7325439668328	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGAGTGTTCACAGAGC	NA	False	NA	12	True	AATAAA	-18	NA	104214163	104220666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_104214232_104216398_104217017_104217730_104218005_104218943_104219095_104219733
ENSMUSG00000041453.13_146769700_146772796_1	chr5	+	810	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	0	1046	0	0	multi-exon	FALSE	canonical	3	6955	junction_1	2705.44403749181	132976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769699	146772796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUSG00000041453.13_146769956_146772796_1	chr5	+	554	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	256	1046	0	0	multi-exon	FALSE	canonical	3	6955	junction_1	2705.44403749181	130952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769955	146772796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUSG00000041453.13_146769956_146772796_2	chr5	+	647	7	NNC	ENSMUSG00000041453.13	novel	1067	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	5852.7472585293	43246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769955	146772796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_146769982_146770457_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUSG00000041453.13_146770012_146772796_1	chr5	+	986	7	NNC	ENSMUSG00000041453.13	novel	1067	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	5857.52873564346	43577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146770011	146772796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_146770377_146770457_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUSG00000041459.16_148701183_148711222_1	chr4	-	2158	7	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	409	junction_1	257.510949066033	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711222	148701182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_148701302_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUSG00000041459.16_148701183_148711222_2	chr4	-	1190	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	168	junction_2	371.00008251278	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711222	148701182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_148701302_148702022_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUSG00000041459.16_148701183_148711222_3	chr4	-	1129	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	406.055741624377	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711222	148701182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_148701302_148702022_148702093_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUSG00000041459.16_148701183_148711222_4	chr4	-	1199	8	FSM	ENSMUSG00000041459.16	ENSMUST00000045180.14	2006	8	0	807	0	0	multi-exon	FALSE	canonical	3	205	junction_2	361.175800938647	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711222	148701182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148701302_148702022_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUSG00000041459.16_148701320_148711222_1	chr4	-	1774	7	FSM	ENSMUSG00000041459.16	ENSMUST00000105699.8	1904	7	-7	137	0	0	multi-exon	FALSE	canonical	3	168	junction_1	346.808024064547	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTGCAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	148711222	148701319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUSG00000041459.16_148701320_148711222_2	chr4	-	2742	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	254	4481	0	0	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTGCAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	148711222	148701319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUSG00000041488.17_11754849_11796192_1	chr19	-	2696	11	FSM	ENSMUSG00000041488.17	ENSMUST00000069285.6	2810	11	114	0	-17	0	multi-exon	FALSE	canonical	3	392	junction_5	58.7316779940774	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGGGCCATCTCTCTG	7251	False	NA	-8	True	AATAAA	-25	NA	11796192	11754848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ENSMUSG00000041506.16_106354517_106362615_1	chr9	+	1516	14	NNC	ENSMUSG00000041506.16	novel	1611	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	366.401128522073	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGTTCTCCCTTGTTCC	NA	False	NA	15	True	ATTAAA	-15	NA	106354516	106362615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358452_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ENSMUSG00000041506.16_106354517_106362615_2	chr9	+	1523	15	NNC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	354.878802249041	2255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGTTCTCCCTTGTTCC	NA	False	NA	15	True	ATTAAA	-15	NA	106354516	106362615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358964_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ENSMUSG00000041506.16_106354517_106362615_3	chr9	+	1524	15	NNC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	353.748216985483	2213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGTTCTCCCTTGTTCC	NA	False	NA	15	True	ATTAAA	-15	NA	106354516	106362615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358359_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ENSMUSG00000041528.16_107926488_107928901_1	chr9	-	1406	10	NIC	ENSMUSG00000041528.16	novel	445	2	NA	NA	528	2245	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGAGGCGGCGCAGCCA	NA	False	NA	NA	False	NA	NA	NA	107928901	107926487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_107926561_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ENSMUSG00000041528.16_107926488_107929116_1	chr9	-	1621	10	NIC	ENSMUSG00000041528.16	novel	445	2	NA	NA	313	2245	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGAGGCGGCGCAGCCA	NA	False	NA	NA	False	NA	NA	NA	107929116	107926487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_107926561_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ENSMUSG00000041528.16_107957653_107962203_1	chr9	-	2245	18	Genic_Genomic	ENSMUSG00000041528.16	novel	4426	39	NA	NA	-1658	-2732	multi-exon	FALSE	non_canonical	0	0	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCACCACAGCCCCATCC	NA	False	NA	NA	False	NA	NA	NA	107962203	107957652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_-_107957730_107958343_107958492_107958583_107958697_107958782_107958898_107958981_107959119_107959199_107959321_107959401_107959521_107959663_107959860_107960018_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107960902_107961062_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
ENSMUSG00000041548.5_116546550_116561050_1	chr5	-	1943	3	FSM	ENSMUSG00000041548.5	ENSMUST00000036991.5	1816	3	-127	0	-127	0	multi-exon	FALSE	canonical	3	315	junction_2	24.5	2017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGCTTCATTTAGCGA	NA	False	NA	0	True	AATAAA	-20	NA	116561050	116546549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_116547550_116553465_116553530_116560171
ENSMUSG00000041560.13_15671763_15679988_1	chr7	-	1510	13	FSM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	11	1655	-8	0	multi-exon	FALSE	canonical	3	1334	junction_1	195.89089579548	1780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679988	15671762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
ENSMUSG00000041560.13_15671763_15679988_2	chr7	-	1794	12	NIC	ENSMUSG00000041560.13	novel	1793	12	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1683	junction_10	114.507858187885	1568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679988	15671762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
ENSMUSG00000041560.13_15679215_15679988_1	chr7	-	299	2	ISM	ENSMUSG00000041560.13	ENSMUST00000200455.2	444	4	-8	2442	-8	-2442	5prime_fragment	FALSE	canonical	3	1867	junction_1	0	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAGTGCTCTTATGAA	NA	False	NA	1	True	NA	NA	NA	15679988	15679214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_15679280_15679754
ENSMUSG00000041571.11_15651133_15656327_1	chr7	-	731	6	NNC	ENSMUSG00000041571.11	novel	736	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	813.951005896547	10351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGATGTTTATTTTGGCT	NA	False	NA	-11	True	AATAAA	-21	NA	15656327	15651132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_15651465_15653772_15653872_15653967_15654034_15654225_15654284_15654373_15654399_15656176
ENSMUSG00000041571.11_15651133_15656327_2	chr7	-	730	5	NNC	ENSMUSG00000041571.11	novel	736	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	883.163206887606	10061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGATGTTTATTTTGGCT	NA	False	NA	-11	True	AATAAA	-21	NA	15656327	15651132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_15651465_15653772_15653872_15653967_15654043_15654229_15654284_15656157
ENSMUSG00000041594.19_123156383_123220661_1	chr14	-	3288	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	3	23	junction_16	38.2839509410142	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123220661	123156382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123220583
ENSMUSG00000041623.18_113575273_113585473_1	chr11	+	2622	5	NIC	ENSMUSG00000041623.18	novel	2062	5	NA	NA	0	0	intron_retention	TRUE	canonical	3	43	junction_1	113.778293184597	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575272	113585473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_113576098_113578599_113580048_113582554_113582660_113583220_113583329_113585337
ENSMUSG00000041629.8_113547363_113553226_1	chr11	-	1041	8	NIC	ENSMUSG00000041629.8	novel	2619	3	NA	NA	21755	4782	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCTGCTTTTTCAGAGC	NA	False	NA	NA	False	NA	NA	NA	113553226	113547362	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
ENSMUSG00000041629.8_113552145_113574761_1	chr11	-	2399	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	220	0	220	0	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTAATTGGTTGGTT	NA	False	NA	-8	True	ATTAAA	-24	NA	113574761	113552144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_113554370_113568129_113568230_113574687
ENSMUSG00000041629.8_113553733_113574761_2	chr11	-	811	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	220	1588	220	-1588	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGTTTCCATGGGGAAAA	NA	False	NA	-16	True	AATAAA	-14	NA	113574761	113553732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_113554370_113568129_113568230_113574687
ENSMUSG00000041629.8_113554027_113574761_1	chr11	-	517	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	220	1882	220	-1882	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCGGCTTTCCGTCT	NA	False	NA	-22	True	TTTAAA	-27	NA	113574761	113554026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_113554370_113568129_113568230_113574687
ENSMUSG00000041632.8_99481294_99552070_1	chr13	+	1972	12	NIC	ENSMUSG00000041632.8	novel	1849	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_6	174.354630538115	1340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGTGGTGTGATTT	NA	False	NA	20	True	AATAAA	-15	NA	99481293	99552070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99537777_99537901_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
ENSMUSG00000041632.8_99481294_99552070_2	chr13	+	1719	9	NIC	ENSMUSG00000041632.8	novel	1849	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	145.098027209194	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGTGGTGTGATTT	NA	False	NA	20	True	AATAAA	-15	NA	99481293	99552070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_99481384_99484839_99484918_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
ENSMUSG00000041638.19_115703333_115737279_1	chr5	+	4031	33	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	20	23434	0	-11394	5prime_fragment	TRUE	canonical	3	352	junction_15	41.659660869359	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTGCCAAACTCATTG	NA	False	NA	NA	False	NA	NA	NA	115703332	115737279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130
ENSMUSG00000041645.15_103374242_103392083_1	chr12	-	3096	9	NNC	ENSMUSG00000041645.15	novel	3063	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	277.685945584216	1239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGAGGGTGTTGCAGT	NA	False	NA	-13	True	ATTAAA	-19	NA	103392083	103374241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103391795
ENSMUSG00000041649.14_152142609_152178341_1	chrX	+	3832	7	NIC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	0	-452	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	50.56349144063	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTCCAGTTACAAGC	NA	False	NA	NA	False	NA	NA	NA	152142608	152178341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_152142706_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ENSMUSG00000041649.14_152143094_152178341_1	chrX	+	3933	6	ISM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	485	452	485	-452	3prime_fragment	FALSE	canonical	3	100	junction_1	23.8964432499902	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTCCAGTTACAAGC	NA	False	NA	NA	False	NA	NA	NA	152143093	152178341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ENSMUSG00000041649.14_152143094_152178793_1	chrX	+	4385	6	ISM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	485	0	485	0	3prime_fragment	FALSE	canonical	3	100	junction_1	23.8964432499902	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTTGAGATTTTCA	NA	False	NA	19	True	NA	NA	NA	152143093	152178793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ENSMUSG00000041650.16_122771743_123127240_1	chr14	+	2484	24	FSM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	-8	116	0	0	multi-exon	FALSE	canonical	3	76	junction_1	20.0942015919555	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTTTGCCCTTTTTTC	NA	False	NA	16	True	AATAAA	-19	NA	122771742	123127240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
ENSMUSG00000041653.6_84052038_84073720_1	chr15	+	3000	9	NNC	ENSMUSG00000041653.6	novel	1313	8	NA	NA	0	2283	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	14.5425023637612	114	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTCTCTGTCTCTTCTG	NA	False	NA	10	True	AATAAA	-45	NA	84052037	84073720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_84052262_84055282_84055516_84056916_84056983_84058468_84058679_84061016_84061078_84063380_84063537_84065120_84065254_84070177_84070283_84071908
ENSMUSG00000041654.16_113135679_113456582_1	chr11	-	2638	11	NNC	ENSMUSG00000041654.16	novel	2664	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	163.123542139079	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7769	False	NA	-2	True	AATAAA	-19	NA	113456582	113135678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ENSMUSG00000041654.16_113135679_113456582_2	chr11	-	2775	10	NIC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	188.939601035638	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7769	False	NA	-2	True	AATAAA	-19	NA	113456582	113135678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456411
ENSMUSG00000041654.16_113135679_113456582_3	chr11	-	2659	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	187.885736552832	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7769	False	NA	-2	True	AATAAA	-19	NA	113456582	113135678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ENSMUSG00000041654.16_113135679_113482690_2	chr11	-	2661	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-26085	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	209.740434823617	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	NA	False	NA	-2	True	AATAAA	-19	NA	113482690	113135678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_113136691_113136716_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113482607
ENSMUSG00000041671.14_142291380_142307881_1	chr6	+	1729	12	FSM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	0	1102	0	104	multi-exon	FALSE	canonical	3	42	junction_5	7.76088944378656	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTTAATGACTCATTTG	NA	False	NA	14	True	AATAAA	-19	NA	142291379	142307881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
ENSMUSG00000041684.12_44158160_44183677_1	chr1	+	3307	11	NIC	ENSMUSG00000041684.12	novel	3313	11	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	12.9479728143057	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATGAATTTTAATGTCT	NA	False	NA	21	True	AATAAA	-21	NA	44158159	44183677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_44158356_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ENSMUSG00000041684.12_44158160_44183677_2	chr1	+	3287	11	NIC	ENSMUSG00000041684.12	novel	3313	11	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	13.7317151150175	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATGAATTTTAATGTCT	NA	False	NA	21	True	AATAAA	-21	NA	44158159	44183677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_44158336_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ENSMUSG00000041703.8_122694207_122701598_1	chr14	-	3276	2	FSM	ENSMUSG00000041703.8	ENSMUST00000039118.7	4767	2	1491	0	1491	0	multi-exon	FALSE	canonical	3	83	junction_1	0	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATTGCTACATTTTATC	NA	False	NA	-26	True	AATAAA	-13	NA	122701598	122694206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_122697188_122701303
ENSMUSG00000041712.8_102724226_102743966_2	chr12	+	3231	12	NNC	ENSMUSG00000041712.8	novel	3261	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	181.82263630907	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCTGATTGTTCT	NA	False	NA	33	True	ATTAAA	-14	NA	102724225	102743966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952_102742051_102742080
ENSMUSG00000041716.8_102707991_102709904_1	chr12	-	1766	2	FSM	ENSMUSG00000096458.8	ENSMUST00000178384.2	1284	2	16	-498	0	498	multi-exon	FALSE	canonical	3	30	junction_1	0	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATCTTTGTATACAT	NA	False	NA	-23	True	AATAAA	-16	NA	102709904	102707990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_102709654_102709801
ENSMUSG00000041716.8_102707991_102724062_1	chr12	-	1926	2	FSM	ENSMUSG00000041716.8	ENSMUST00000174651.2	2795	2	869	0	869	0	multi-exon	FALSE	canonical	3	96	junction_1	0	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATCTTTGTATACAT	6359	False	NA	-23	True	AATAAA	-16	NA	102724062	102707990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_102709654_102723799
ENSMUSG00000041716.8_102724226_102743607_1	chr12	-	2902	11	NIC	ENSMUSG00000041716.8	novel	2795	2	NA	NA	-18676	-16235	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGGCGTCGCGAGAAGGC	-2	True	NA	NA	False	NA	NA	NA	102743607	102724225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ENSMUSG00000041718.17_143101019_143108193_1	chrX	+	1479	4	FSM	ENSMUSG00000041718.17	ENSMUST00000149330.8	479	4	20	-1020	0	0	multi-exon	FALSE	canonical	3	125	junction_3	280.483313031077	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTACTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	143101018	143108193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_143101118_143102998_143103058_143105007_143105147_143107011
ENSMUSG00000041718.17_143101019_143152666_1	chrX	+	3074	26	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	0	4780	0	-101	5prime_fragment	FALSE	canonical	3	214	junction_1	224.054636193943	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGCCGCAGCCACAGC	NA	False	NA	NA	False	NA	NA	NA	143101018	143152666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556
ENSMUSG00000041718.17_143101019_143152666_2	chrX	+	2970	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	-101	combination_of_known_junctions	FALSE	canonical	3	548	junction_3	174.592581743899	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGCCGCAGCCACAGC	NA	False	NA	NA	False	NA	NA	NA	143101018	143152666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556
ENSMUSG00000041718.17_143101019_143152666_3	chrX	+	3005	25	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	-101	combination_of_known_junctions	FALSE	canonical	3	128	junction_21	291.130241830582	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGCCGCAGCCACAGC	NA	False	NA	NA	False	NA	NA	NA	143101018	143152666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556
ENSMUSG00000041718.17_143101019_143152666_4	chrX	+	2961	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	-101	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_23	254.609548917553	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGCCGCAGCCACAGC	NA	False	NA	NA	False	NA	NA	NA	143101018	143152666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139949_143146860_143147104_143150894_143150936_143152556
ENSMUSG00000041718.17_143118865_143152666_1	chrX	+	2916	23	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	17846	4780	0	-101	internal_fragment	FALSE	canonical	3	957	junction_21	93.51975307322	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGCCGCAGCCACAGC	NA	False	NA	NA	False	NA	NA	NA	143118864	143152666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556
ENSMUSG00000041718.17_143118865_143152666_2	chrX	+	2847	22	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	0	-101	intron_retention	FALSE	canonical	3	128	junction_18	227.387987924064	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGCCGCAGCCACAGC	NA	False	NA	NA	False	NA	NA	NA	143118864	143152666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556
ENSMUSG00000041733.11_115417754_115434368_1	chr5	+	1345	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	29	663	0	0	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCAGATTGGAATCTAAG	NA	False	NA	106	True	NA	NA	NA	115417753	115434368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
ENSMUSG00000041733.11_115417754_115435132_1	chr5	+	2109	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	29	-101	0	101	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAGACAGTGTTGTATTT	NA	False	NA	5	True	AGTAAA	-21	NA	115417753	115435132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
ENSMUSG00000041740.17_115379829_115410360_1	chr5	-	2521	17	FSM	ENSMUSG00000041740.17	ENSMUST00000112097.8	3476	17	597	358	0	0	multi-exon	FALSE	canonical	3	78	junction_9	376.541410197803	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410360	115379828	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387233_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ENSMUSG00000041747.4_98384614_98399521_1	chr13	-	2831	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	28	1261	0	-1261	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAGCCGAGGATGTCCT	NA	False	NA	-39	True	AATAAA	-16	NA	98399521	98384613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ENSMUSG00000041747.4_98384736_98399521_1	chr13	-	2709	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	28	1383	0	-1383	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGAGGTGTTCCTGA	NA	False	NA	-3	True	TATAAA	-19	NA	98399521	98384735	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ENSMUSG00000041750.14_86893858_86896840_1	chr3	+	1280	6	FSM	ENSMUSG00000041750.14	ENSMUST00000194208.6	1527	6	0	247	0	0	multi-exon	FALSE	canonical	2	3	junction_2	24.5568727650733	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTATGTGCGGAGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	86893857	86896840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_86894013_86894294_86894568_86894849_86895129_86895584_86895863_86896457_86896555_86896642
ENSMUSG00000041763.15_43973174_44041499_1	chr1	+	4010	30	FSM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	7	632	0	3	multi-exon	FALSE	canonical	3	77	junction_23	82.0288369004111	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCAGTGGCGTGTGGCT	3311	False	NA	7	True	ATTAAA	-20	NA	43973173	44041499	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ENSMUSG00000041765.7_122116032_122257647_1	chr14	+	1339	9	NNC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	0	-799	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.982406710346	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTATTTTTTTACTGG	8886	False	NA	19	True	ATTAAA	-16	NA	122116031	122257647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_122116191_122142539_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ENSMUSG00000041765.7_122116032_122257647_2	chr14	+	1292	8	NIC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	0	-799	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	124.704057836208	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTATTTTTTTACTGG	8886	False	NA	19	True	ATTAAA	-16	NA	122116031	122257647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122231636_122231883_122246202_122246326_122257361
ENSMUSG00000041765.7_122116074_122257647_1	chr14	+	1298	9	FSM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	42	799	0	-799	multi-exon	FALSE	canonical	3	342	junction_2	40.200862863874	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTATTTTTTTACTGG	8928	False	NA	19	True	ATTAAA	-16	NA	122116073	122257647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ENSMUSG00000041765.7_122116074_122258447_2	chr14	+	2050	8	NIC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	124.704057836208	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAGTAGTTTTTATAC	8928	False	NA	17	True	AATAAA	-17	NA	122116073	122258447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122231636_122231883_122246202_122246326_122257361
ENSMUSG00000041765.7_122183726_122257647_1	chr14	+	1022	6	NNC	ENSMUSG00000041765.7	novel	688	5	NA	NA	0	-799	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	167.24281748404	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTATTTTTTTACTGG	2010	False	NA	19	True	ATTAAA	-16	NA	122183725	122257647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_122183921_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ENSMUSG00000041765.7_122183726_122258447_1	chr14	+	1822	6	NNC	ENSMUSG00000041765.7	novel	688	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	167.24281748404	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAGTAGTTTTTATAC	2010	False	NA	17	True	AATAAA	-17	NA	122183725	122258447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_122183921_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ENSMUSG00000041769.14_138448324_138484458_2	chr7	+	1447	7	NIC	ENSMUSG00000041769.14	novel	1938	8	NA	NA	0	-325	combination_of_known_junctions	FALSE	canonical	3	74	junction_2	229.285423774726	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTAAGTCTGAGCCTT	NA	False	NA	23	True	AATAAA	-19	NA	138448323	138484458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_138448434_138470138_138470237_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ENSMUSG00000041769.14_138448324_138484786_2	chr7	+	1775	7	NIC	ENSMUSG00000041769.14	novel	1938	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_2	229.285423774726	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448323	138484786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_138448434_138470138_138470237_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ENSMUSG00000041774.17_16969877_17019337_1	chr16	+	2302	5	Genic_Genomic	ENSMUSG00000041774.17	novel	3097	7	NA	NA	5030	40772	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGCTTTCCCAAAATG	NA	False	NA	NA	False	NA	NA	NA	16969876	17019337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_16971192_16971481_16972147_16977853_16978041_16994275_16994372_17019298
ENSMUSG00000041774.17_16969877_17019337_2	chr16	+	2351	5	Genic_Genomic	ENSMUSG00000041774.17	novel	3097	7	NA	NA	5030	40772	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGCTTTCCCAAAATG	NA	False	NA	NA	False	NA	NA	NA	16969876	17019337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_16971192_16971432_16972147_16977853_16978041_16994275_16994372_17019298
ENSMUSG00000041774.17_16969877_17019337_3	chr16	+	2377	5	Genic_Genomic	ENSMUSG00000041774.17	novel	3097	7	NA	NA	5030	40772	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGCTTTCCCAAAATG	NA	False	NA	NA	False	NA	NA	NA	16969876	17019337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_16971192_16971406_16972147_16977853_16978041_16994275_16994372_17019298
ENSMUSG00000041774.17_16970327_17019337_1	chr16	+	1927	5	Genic_Genomic	ENSMUSG00000041774.17	novel	3097	7	NA	NA	5480	40772	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGCTTTCCCAAAATG	NA	False	NA	NA	False	NA	NA	NA	16970326	17019337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_16971192_16971406_16972147_16977853_16978041_16994275_16994372_17019298
ENSMUSG00000041774.17_16970327_17019337_2	chr16	+	1901	5	Genic_Genomic	ENSMUSG00000041774.17	novel	3097	7	NA	NA	5480	40772	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGCTTTCCCAAAATG	NA	False	NA	NA	False	NA	NA	NA	16970326	17019337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_16971192_16971432_16972147_16977853_16978041_16994275_16994372_17019298
ENSMUSG00000041774.17_16970840_17019337_1	chr16	+	1388	5	Genic_Genomic	ENSMUSG00000041774.17	novel	3097	7	NA	NA	5993	40772	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGCTTTCCCAAAATG	NA	False	NA	NA	False	NA	NA	NA	16970839	17019337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_16971192_16971432_16972147_16977853_16978041_16994275_16994372_17019298
ENSMUSG00000041774.17_16970840_17019337_3	chr16	+	1414	5	Genic_Genomic	ENSMUSG00000041774.17	novel	3097	7	NA	NA	5993	40772	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGCTTTCCCAAAATG	NA	False	NA	NA	False	NA	NA	NA	16970839	17019337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_16971192_16971406_16972147_16977853_16978041_16994275_16994372_17019298
ENSMUSG00000041777.13_73114211_73142911_1	chr2	-	1914	9	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	0	-762	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.521178838251	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTCCTTAAGACTTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	73142911	73114210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73136283_73136620_73136686_73137198_73137273_73140800_73140896_73142760
ENSMUSG00000041777.13_73114316_73142911_1	chr2	-	1809	9	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	0	-867	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.521178838251	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTATCAATTCAAATTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	73142911	73114315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73136283_73136620_73136686_73137198_73137273_73140800_73140896_73142760
ENSMUSG00000041777.13_73114525_73142911_1	chr2	-	1600	9	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	0	836	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.521178838251	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAAGTTTGCAGATATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	73142911	73114524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73136283_73136620_73136686_73137198_73137273_73140800_73140896_73142760
ENSMUSG00000041777.13_73143003_73166212_1	chr2	-	1301	8	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	-23167	-27642	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCGGAAGAGAGCAAGAGGG	NA	False	NA	NA	False	NA	NA	NA	73166212	73143002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73160106_73160270_73161326_73161502_73166054
ENSMUSG00000041777.13_73143003_73168162_1	chr2	-	3251	8	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	-25117	-27642	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCGGAAGAGAGCAAGAGGG	NA	False	NA	NA	False	NA	NA	NA	73168162	73143002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73160106_73160270_73161326_73161502_73166054
ENSMUSG00000041779.6_21071595_21149453_1	chr1	-	1420	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	0	5072	0	2942	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCTGAGCCGCCAGAT	NA	False	NA	-2	True	AATAAA	-21	NA	21149453	21071594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
ENSMUSG00000041801.6_135694382_135696874_1	chr1	+	910	2	FSM	ENSMUSG00000041801.6	ENSMUST00000038945.6	1435	2	525	0	-490	0	multi-exon	FALSE	canonical	3	639	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTACTGAGTGAAATTC	7270	False	NA	22	True	AATGAA	-29	NA	135694381	135696874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_135694633_135696215
ENSMUSG00000041815.15_83010177_83033502_1	chr15	-	3181	10	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	199.638995176448	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCTATAATGTCTTT	NA	False	NA	-11	True	AATAAA	-17	NA	83033502	83010176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_83011539_83011573_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
ENSMUSG00000041815.15_83010177_83033502_2	chr15	-	3179	10	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	199.638995176448	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCTATAATGTCTTT	NA	False	NA	-11	True	AATAAA	-17	NA	83033502	83010176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_83011492_83011528_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
ENSMUSG00000041815.15_83010177_83033502_4	chr15	-	3181	10	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	199.638995176448	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCTATAATGTCTTT	NA	False	NA	-11	True	AATAAA	-17	NA	83033502	83010176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_83011503_83011537_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
ENSMUSG00000041815.15_83010177_83033530_1	chr15	-	3206	10	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	199.638995176448	1299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCTATAATGTCTTT	NA	False	NA	-11	True	AATAAA	-17	NA	83033530	83010176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_83011575_83011612_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
ENSMUSG00000041815.15_83010177_83033530_3	chr15	-	3120	9	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	258.479901297954	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCTATAATGTCTTT	NA	False	NA	-11	True	AATAAA	-17	NA	83033530	83010176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_83011492_83011528_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83022332_83022724_83033395
ENSMUSG00000041817.15_97267492_97274381_1	chr13	+	1071	6	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	59341	6860	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5049	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAGAAGGCCGAGTGGA	NA	False	NA	NA	False	NA	NA	NA	97267491	97274381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_97267732_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
ENSMUSG00000041817.15_97267492_97274381_3	chr13	+	1067	6	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	59341	6860	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1233	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAGAAGGCCGAGTGGA	NA	False	NA	NA	False	NA	NA	NA	97267491	97274381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274271
ENSMUSG00000041817.15_97267492_97274381_4	chr13	+	1066	6	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	59341	6860	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3768	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAGAAGGCCGAGTGGA	NA	False	NA	NA	False	NA	NA	NA	97267491	97274381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_97267737_97268360_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
ENSMUSG00000041831.18_6930413_7005443_1	chr17	+	2654	16	NIC	ENSMUSG00000041831.18	novel	2244	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	13.5522035928561	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAACTCCCAGCATTTAT	NA	False	NA	6	True	AATAAA	-15	NA	6930412	7005443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_6930610_6940859_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
ENSMUSG00000041840.9_77844481_77855486_1	chr18	-	1584	10	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	0	786	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	423.686583440701	3770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAACAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	77855486	77844480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_77844971_77845182_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ENSMUSG00000041840.9_77844737_77855480_1	chr18	-	1322	10	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	0	530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	423.686583440701	3661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCTTCAGTAGTTTCC	NA	False	NA	NA	False	NA	NA	NA	77855480	77844736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_77844971_77845182_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ENSMUSG00000041840.9_77845269_77855480_1	chr18	-	992	9	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	435.926312580464	2036	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTTGTTATCTGTTGC	NA	False	NA	-2	True	AATACA	-18	NA	77855480	77845268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_77845444_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ENSMUSG00000041840.9_77845269_77855480_2	chr18	-	866	8	NIC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	13	junction_6	465.485219739487	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTTGTTATCTGTTGC	NA	False	NA	-2	True	AATACA	-18	NA	77855480	77845268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77854563_77854739_77855419
ENSMUSG00000041840.9_77845269_77855480_3	chr18	-	1032	9	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	444.252673036415	1705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTTGTTATCTGTTGC	NA	False	NA	-2	True	AATACA	-18	NA	77855480	77845268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848761_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ENSMUSG00000041841.9_5146127_5148160_1	chr15	+	367	4	NNC	ENSMUSG00000041841.9	novel	835	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9932.20520439556	101274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGGTGATCTAAGGTA	2248	False	NA	37	True	AATAAA	-18	NA	5146126	5148160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_5146167_5146774_5146905_5147100_5147186_5148048
ENSMUSG00000041841.9_5146127_5148160_2	chr15	+	373	4	FSM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	0	462	0	1	multi-exon	FALSE	canonical	3	15185	junction_3	3886.71174930972	189341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGGTGATCTAAGGTA	2248	False	NA	37	True	AATAAA	-18	NA	5146126	5148160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_5146167_5146768_5146905_5147100_5147186_5148048
ENSMUSG00000041845.12_4475695_4489428_1	chr19	-	1104	5	FSM	ENSMUSG00000041845.12	ENSMUST00000048197.10	1344	5	32	208	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4.02336923485777	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTCCTGACTCTTC	9180	False	NA	-4	True	ACTAAA	-15	NA	4489428	4475694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4476285_4476654_4476790_4482082_4482193_4482795_4482884_4489247
ENSMUSG00000041879.14_135322814_135358179_1	chr1	-	941	6	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-8	-911	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	247.823808380067	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACAAAATTTGTAACATG	NA	False	NA	NA	False	NA	NA	NA	135358179	135322813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_135322994_135336983_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ENSMUSG00000041889.8_135299194_135301188_1	chr1	-	1008	3	FSM	ENSMUSG00000041889.8	ENSMUST00000159918.2	1404	3	0	396	0	-396	multi-exon	FALSE	canonical	3	26	junction_2	3.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGAATCACTGGCCCC	NA	False	NA	-7	True	ATTAAA	-20	NA	135301188	135299193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_135299735_135299934_135300103_135300889
ENSMUSG00000041891.17_66116757_66135699_1	chr18	-	1736	13	FSM	ENSMUSG00000041891.17	ENSMUST00000236866.2	4676	13	11	2929	-7	574	multi-exon	FALSE	canonical	3	864	junction_5	66.5663307452716	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTCATAGTACTACAT	NA	False	NA	0	True	AATAAA	-18	NA	66135699	66116756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ENSMUSG00000041926.16_135190450_135192985_1	chr1	-	626	3	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	18837	0	2155	0	3prime_fragment	FALSE	canonical	3	295	junction_1	1.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGGAGTTATAGAATG	NA	False	NA	-14	True	AATAAA	-22	NA	135192985	135190449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_135190868_135191790_135191934_135192920
ENSMUSG00000041935.11_4013578_4025226_2	chr15	-	3508	5	NIC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	0	-2061	intron_retention	FALSE	canonical	3	219	junction_2	23.7907545067406	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTATGTTTTACAACCATA	2180	False	NA	NA	False	NA	NA	NA	4025226	4013577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021947_4025096
ENSMUSG00000041939.15_114582347_114591213_1	chr5	+	996	7	ISM	ENSMUSG00000041939.15	ENSMUST00000043760.15	1660	11	-20	7439	0	2	5prime_fragment	FALSE	canonical	3	117	junction_1	10.1063786238637	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTGTCTGTCTGTCC	NA	False	NA	NA	False	NA	NA	NA	114582346	114591213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940
ENSMUSG00000041939.15_114582347_114598652_1	chr5	+	1716	11	FSM	ENSMUSG00000041939.15	ENSMUST00000112239.9	1602	11	0	-114	0	0	multi-exon	FALSE	canonical	3	9	junction_3	36.3257484437692	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGGCCCTGTGGGAAG	NA	False	NA	NA	False	AATAAA	-20	NA	114582346	114598652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588301_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ENSMUSG00000041939.15_114582347_114598652_2	chr5	+	1718	12	NIC	ENSMUSG00000041939.15	novel	1660	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_2	45.2173812847221	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGGCCCTGTGGGAAG	NA	False	NA	NA	False	AATAAA	-20	NA	114582346	114598652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_114582425_114582712_114582751_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ENSMUSG00000041949.7_107409700_107577198_1	chr8	+	3536	18	FSM	ENSMUSG00000041949.7	ENSMUST00000048359.5	4409	18	0	873	0	-873	multi-exon	FALSE	canonical	3	69	junction_2	14.9330686662985	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCAGTGAGAAGGGTGA	1113	False	NA	NA	False	NA	NA	NA	107409699	107577198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
ENSMUSG00000041949.7_107409700_107577497_1	chr8	+	3835	18	FSM	ENSMUSG00000041949.7	ENSMUST00000048359.5	4409	18	0	574	0	-574	multi-exon	FALSE	canonical	3	69	junction_2	14.9330686662985	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCACCGAGCTGGTTG	1113	False	NA	41	True	AATAAA	-42	NA	107409699	107577497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
ENSMUSG00000041957.16_16064841_16090576_1	chr16	+	1500	8	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	33659	0	33659	0	3prime_fragment	FALSE	canonical	3	88	junction_1	16.9825841162441	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGTGACCTTCGATT	NA	False	NA	19	True	AATAAA	-19	NA	16064840	16090576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
ENSMUSG00000041966.19_70794905_70885927_1	chr2	+	2119	10	NIC	ENSMUSG00000041966.19	novel	1214	11	NA	NA	-90767	-22562	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCAGCCCTACGGCGCAG	NA	False	NA	NA	False	NA	NA	NA	70794904	70885927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812312_70823827_70823920_70848563_70848719_70885714
ENSMUSG00000041966.19_70886088_70920969_1	chr2	+	2506	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	0	5233	0	347	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTCAATTCATCAGTTC	NA	False	NA	18	True	NA	NA	NA	70886087	70920969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ENSMUSG00000042029.8_116369022_116424297_1	chr12	+	3750	29	FSM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	0	934	0	-934	multi-exon	FALSE	canonical	3	123	junction_1	40.0130559050061	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTGTATATTG	NA	False	NA	7	True	AATAGA	-24	NA	116369021	116424297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ENSMUSG00000042032.14_40570141_40583450_1	chr11	-	1798	7	FSM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	151	0	-2	0	multi-exon	FALSE	canonical	3	244	junction_6	119.767367100652	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGCTTTATTTTGTA	NA	False	NA	-12	True	AATAAA	-18	NA	40583450	40570140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
ENSMUSG00000042032.14_40570141_40585814_1	chr11	-	1809	7	NIC	ENSMUSG00000042032.14	novel	2053	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	204.398032171436	1674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGCTTTATTTTGTA	NA	False	NA	-12	True	AATAAA	-18	NA	40585814	40570140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576141_40578427_40578623_40585629
ENSMUSG00000042032.14_40570768_40583450_1	chr11	-	1171	7	FSM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	151	627	-2	-627	multi-exon	FALSE	canonical	3	244	junction_6	119.767367100652	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTAATTGTGACACATG	NA	False	NA	NA	False	AATAAA	-22	NA	40583450	40570767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
ENSMUSG00000042073.16_106317250_106324877_1	chr9	+	1261	7	NIC	ENSMUSG00000042073.16	novel	1624	4	NA	NA	-7408	-3931	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGCAGGCCAAGCCTG	3812	False	NA	NA	False	NA	NA	NA	106317249	106324877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323029_106324729
ENSMUSG00000042073.16_106325852_106330122_1	chr9	+	1467	4	FSM	ENSMUSG00000042073.16	ENSMUST00000048527.15	1745	4	278	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTTTTGCTGTCTCCGG	NA	False	NA	13	True	AATAAA	-20	NA	106325851	106330122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_106325909_106327202_106327431_106328591_106328834_106329182
ENSMUSG00000042078.15_114164971_114181007_1	chr5	-	2368	9	ISM	ENSMUSG00000042078.15	ENSMUST00000134790.8	1682	15	22272	-1215	-65	0	3prime_fragment	FALSE	canonical	3	12	junction_8	2.91279504943276	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTCGACTAACTTGTT	NA	False	NA	53	True	TTTAAA	-39	NA	114181007	114164970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_114166526_114168157_114168248_114169621_114169704_114170769_114170882_114173213_114173322_114176596_114176674_114179884_114179959_114180248_114180378_114180866
ENSMUSG00000042079.14_117883756_117902113_1	chr6	+	1680	4	FSM	ENSMUSG00000042079.14	ENSMUST00000035493.14	2147	4	0	467	0	-467	multi-exon	FALSE	canonical	3	2150	junction_1	1335.10981654028	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTCTCATGCAAACTTT	3734	False	NA	NA	False	ATTAAA	-15	NA	117883755	117902113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_117883801_117894430_117894560_117896059_117896121_117900668
ENSMUSG00000042079.14_117884777_117902113_1	chr6	+	1699	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	967	-467	at_least_one_novel_splicesite	FALSE	canonical	3	602	junction_1	2063.97825139274	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTCTCATGCAAACTTT	4755	False	NA	NA	False	ATTAAA	-15	NA	117884776	117902113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_117884841_117894430_117894560_117896059_117896121_117900668
ENSMUSG00000042079.14_117884777_117902583_1	chr6	+	2208	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	967	0	at_least_one_novel_splicesite	FALSE	canonical	3	135	junction_1	2283.97154097856	5704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	4755	False	NA	NA	False	AATAAA	-17	NA	117884776	117902583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_117884880_117894430_117894560_117896059_117896121_117900668
ENSMUSG00000042079.14_117884777_117902583_2	chr6	+	2169	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	967	0	at_least_one_novel_splicesite	FALSE	canonical	3	602	junction_1	2063.97825139274	5670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	4755	False	NA	NA	False	AATAAA	-17	NA	117884776	117902583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_117884841_117894430_117894560_117896059_117896121_117900668
ENSMUSG00000042079.14_117893942_117902583_1	chr6	+	2196	4	FSM	ENSMUSG00000042079.14	ENSMUST00000179478.8	956	4	0	-1240	0	0	multi-exon	FALSE	canonical	3	625	junction_1	2053.14430948133	5241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	NA	False	NA	NA	False	AATAAA	-17	NA	117893941	117902583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_117894033_117894430_117894560_117896059_117896121_117900668
ENSMUSG00000042111.10_34475759_34478434_1	chr1	-	1378	5	FSM	ENSMUSG00000042111.10	ENSMUST00000042493.10	1705	5	319	8	319	0	multi-exon	FALSE	canonical	3	256	junction_1	5.33853912601566	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTCACAGAGCTCTCAT	7523	False	NA	-7	True	AATAAA	-15	NA	34478434	34475758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_34476692_34476807_34476940_34477930_34478014_34478123_34478228_34478308
ENSMUSG00000042111.10_34475759_34478434_2	chr1	-	1374	5	NNC	ENSMUSG00000042111.10	novel	1705	5	NA	NA	319	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.501082246012	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTCACAGAGCTCTCAT	7523	False	NA	-7	True	AATAAA	-15	NA	34478434	34475758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_34476684_34476803_34476940_34477930_34478014_34478123_34478228_34478308
ENSMUSG00000042111.10_34475759_34478434_3	chr1	-	1242	5	NNC	ENSMUSG00000042111.10	novel	1705	5	NA	NA	319	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.501082246012	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTCACAGAGCTCTCAT	7523	False	NA	-7	True	AATAAA	-15	NA	34478434	34475758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_34476589_34476840_34476940_34477930_34478014_34478123_34478228_34478308
ENSMUSG00000042129.9_116614935_116650792_1	chr6	-	1373	11	FSM	ENSMUSG00000042129.9	ENSMUST00000035842.7	6460	11	121	4966	-22	1250	multi-exon	FALSE	canonical	3	10	junction_1	5.29528091794949	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTGTATGGTTGATTAG	8727	False	NA	NA	False	AATAAA	-25	NA	116650792	116614934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_116615260_116616401_116616500_116617193_116617316_116618388_116618441_116618645_116618748_116622056_116622218_116622846_116622939_116624527_116624671_116636485_116636562_116638803_116638898_116650684
ENSMUSG00000042133.17_69553198_69580959_1	chr2	+	1855	15	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	0	1067	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	105.179850828988	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGGTGTAATACTGTG	NA	False	NA	NA	False	AATAAA	-23	NA	69553197	69580959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615_69580086_69580911
ENSMUSG00000042148.9_63854214_63970296_1	chr11	-	2158	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	-4	761	-2	-761	multi-exon	FALSE	canonical	3	230	junction_1	27.1272720502613	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTTCAGAAACCCCAGG	5003	False	NA	NA	False	NA	NA	NA	63970296	63854213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ENSMUSG00000042148.9_63854692_63970296_1	chr11	-	1680	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	-4	1239	-2	-1239	multi-exon	FALSE	canonical	3	230	junction_1	27.1272720502613	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTCTCCTGGAA	5003	False	NA	NA	False	NA	NA	NA	63970296	63854691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ENSMUSG00000042198.13_3938914_3941419_1	chr4	+	540	3	ISM	ENSMUSG00000042198.13	ENSMUST00000041122.11	672	5	0	2109	0	0	5prime_fragment	FALSE	canonical	3	280	junction_1	86	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATATTCCTGGCCAGTG	-5	True	NA	NA	False	AATAAA	-16	NA	3938913	3941419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_3939132_3939378_3939527_3941245
ENSMUSG00000042198.13_3938914_3943526_1	chr4	+	787	6	NNC	ENSMUSG00000042198.13	novel	711	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	190.84695439016	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	-5	True	NA	28	True	ATTAAA	-21	NA	3938913	3943526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_3939132_3939378_3939527_3940766_3940884_3941245_3941312_3942720_3942820_3943387
ENSMUSG00000042198.13_3939043_3943526_1	chr4	+	541	5	FSM	ENSMUSG00000042198.13	ENSMUST00000041122.11	672	5	129	2	0	0	multi-exon	FALSE	canonical	3	280	junction_1	68.1762421962372	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	124	False	NA	28	True	ATTAAA	-21	NA	3939042	3943526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_3939132_3939378_3939527_3941245_3941312_3942720_3942820_3943387
ENSMUSG00000042210.18_106317250_106324877_1	chr9	-	1320	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	104.893067242576	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTTGTGTTTCCTGAC	NA	False	NA	1	True	AATAAA	-28	NA	106324877	106317249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_106317604_106317819_106318110_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323034_106324729
ENSMUSG00000042210.18_106317250_106324877_2	chr9	-	1261	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	104.893067242576	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTTGTGTTTCCTGAC	NA	False	NA	1	True	AATAAA	-28	NA	106324877	106317249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322851_106322969_106323034_106324729
ENSMUSG00000042210.18_106317250_106324877_3	chr9	-	1266	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	104.893067242576	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTTGTGTTTCCTGAC	NA	False	NA	1	True	AATAAA	-28	NA	106324877	106317249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323034_106324729
ENSMUSG00000042211.8_62637226_62681798_1	chr18	-	4061	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	64.6469568111548	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCCAGAGCATTTC	NA	False	NA	-48	True	AATAAA	-16	NA	62681798	62637225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ENSMUSG00000042215.9_33784565_33796808_1	chr1	-	1747	4	NNC	ENSMUSG00000042215.9	novel	1860	3	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.2968437932844	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAGCATTGGCCATTAT	NA	False	NA	-5	True	NA	NA	NA	33796808	33784564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_33785209_33785253_33786098_33787297_33787408_33796659
ENSMUSG00000042228.15_3678127_3791077_1	chr4	+	2915	13	FSM	ENSMUSG00000042228.15	ENSMUST00000041377.13	3463	13	12	536	0	-535	multi-exon	FALSE	canonical	3	29	junction_2	7.08823359911026	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTGTCTTGTGTATCA	5	True	NA	20	True	AATACA	-17	NA	3678126	3791077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_3678365_3738724_3738862_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ENSMUSG00000042228.15_3678127_3791077_2	chr4	+	2852	13	FSM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	0	535	0	-535	multi-exon	FALSE	canonical	3	9	junction_2	11.3023473471468	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTGTCTTGTGTATCA	5	True	NA	20	True	AATACA	-17	NA	3678126	3791077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_3678365_3738724_3738799_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ENSMUSG00000042229.10_134422386_134434282_1	chr1	+	631	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	0	2230	0	-2230	multi-exon	FALSE	canonical	3	479	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCCTGTTTTGGAACAT	6638	False	NA	NA	False	NA	NA	NA	134422385	134434282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_134422548_134433813
ENSMUSG00000042229.10_134422386_134435623_1	chr1	+	1966	2	NNC	ENSMUSG00000042229.10	novel	2861	2	NA	NA	0	-889	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCATCTGTTTTCTGG	6638	False	NA	NA	False	ATTAAA	-1	NA	134422385	134435623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_134422537_134433808
ENSMUSG00000042229.10_134422386_134435623_2	chr1	+	1077	3	NNC	ENSMUSG00000042229.10	novel	2861	2	NA	NA	0	-889	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	239.5	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCATCTGTTTTCTGG	6638	False	NA	NA	False	ATTAAA	-1	NA	134422385	134435623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_134422548_134433813_134434683_134435577
ENSMUSG00000042229.10_134422386_134435623_3	chr1	+	1972	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	0	889	0	-889	multi-exon	FALSE	canonical	3	479	junction_1	0	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCATCTGTTTTCTGG	6638	False	NA	NA	False	ATTAAA	-1	NA	134422385	134435623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_134422548_134433813
ENSMUSG00000042229.10_134428887_134435619_1	chr1	+	1879	2	NNC	ENSMUSG00000042229.10	novel	2861	2	NA	NA	6501	-893	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCTTGTCATCTGTTTT	751	False	NA	NA	False	NA	NA	NA	134428886	134435619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_134428960_134433813
ENSMUSG00000042289.12_127399830_127402974_1	chr7	+	1722	7	NIC	ENSMUSG00000042289.12	novel	1828	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	28.5389597256491	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTACCTTTTACCCA	1938	False	NA	14	True	AATAAA	-15	NA	127399829	127402974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_127399887_127400298_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
ENSMUSG00000042303.20_80861980_80896272_1	chr15	+	2764	22	FSM	ENSMUSG00000042303.20	ENSMUST00000139517.9	2997	22	14	219	0	182	multi-exon	FALSE	canonical	3	124	junction_4	14.7956603308487	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCTCCCATCTTTTGT	NA	False	NA	13	True	AATAAA	-13	NA	80861979	80896272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ENSMUSG00000042305.13_134275259_134289679_3	chr1	-	1687	8	FSM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	38	1424	0	161	multi-exon	FALSE	canonical	0	0	junction_2	214.632196074673	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGATTTGTGCATCT	NA	False	NA	0	True	AATAAA	-28	NA	134289679	134275258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ENSMUSG00000042308.15_127398279_127399294_1	chr7	+	939	2	ISM	ENSMUSG00000042308.15	ENSMUST00000047157.13	5927	19	21718	-7	20530	0	3prime_fragment	TRUE	canonical	3	55	junction_1	0	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTCAGTATCTTTGG	387	False	NA	17	True	ATTAAA	-17	NA	127398278	127399294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_127398401_127398477
ENSMUSG00000042312.11_90422299_90431888_1	chr3	+	337	3	NNC	ENSMUSG00000042312.11	novel	715	4	NA	NA	557	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	185	418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTATTTATTTATTTA	NA	False	NA	15	True	AATAAA	-20	NA	90422298	90431888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_90422327_90423269_90423350_90431659
ENSMUSG00000042328.14_112490966_112525924_1	chr5	+	2475	14	FSM	ENSMUSG00000042328.14	ENSMUST00000035279.4	2836	14	5	356	0	-343	multi-exon	FALSE	canonical	3	24	junction_1	21.6682900317355	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGATTGCGCCTTCAGCCT	NA	False	NA	NA	False	NA	NA	NA	112490965	112525924	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_112491030_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ENSMUSG00000042345.16_31431087_31461380_1	chr17	+	2855	13	FSM	ENSMUSG00000042345.16	ENSMUST00000151620.9	2539	13	0	-316	0	316	multi-exon	FALSE	canonical	3	21	junction_1	6.05300659911163	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTCGCTCAGGTCGTT	NA	False	NA	5	True	CATAAA	-18	NA	31431086	31461380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_31431206_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
ENSMUSG00000042345.16_31431087_31461380_2	chr17	+	2983	13	NIC	ENSMUSG00000042345.16	novel	2539	13	NA	NA	0	316	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	6.05300659911163	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTCGCTCAGGTCGTT	NA	False	NA	5	True	CATAAA	-18	NA	31431086	31461380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_31431334_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
ENSMUSG00000042350.14_85017671_85030077_1	chr12	-	756	8	NNC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	-12403	-19815	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCCGGCAAAGGCCAAC	NA	False	NA	NA	False	NA	NA	NA	85030077	85017670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_85017740_85017988_85018064_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ENSMUSG00000042350.14_85017671_85030077_2	chr12	-	757	8	NNC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	-12403	-19815	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCCGGCAAAGGCCAAC	NA	False	NA	NA	False	NA	NA	NA	85030077	85017670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_85017740_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027280_85027377_85029009_85029105_85029942
ENSMUSG00000042350.14_85017671_85030077_3	chr12	-	748	8	NNC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	-12403	-19815	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCCGGCAAAGGCCAAC	NA	False	NA	NA	False	NA	NA	NA	85030077	85017670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_85017740_85017988_85018061_85019768_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ENSMUSG00000042350.14_85017671_85030077_4	chr12	-	736	8	NNC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	-12403	-19815	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCCGGCAAAGGCCAAC	NA	False	NA	NA	False	NA	NA	NA	85030077	85017670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_85017740_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85026229_85027288_85027377_85029009_85029105_85029942
ENSMUSG00000042350.14_85017671_85030077_5	chr12	-	743	8	NNC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	-12403	-19815	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4982	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCCGGCAAAGGCCAAC	NA	False	NA	NA	False	NA	NA	NA	85030077	85017670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_85017740_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029015_85029105_85029942
ENSMUSG00000042350.14_85017671_85030077_6	chr12	-	827	8	NIC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	-12403	-19815	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCCGGCAAAGGCCAAC	NA	False	NA	NA	False	NA	NA	NA	85030077	85017670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_85017818_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ENSMUSG00000042350.14_85017671_85030077_7	chr12	-	1796	7	NIC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	-12403	-19815	intron_retention	FALSE	non_canonical	0	0	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCCGGCAAAGGCCAAC	NA	False	NA	NA	False	NA	NA	NA	85030077	85017670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_85017740_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85027377_85029009_85029105_85029942
ENSMUSG00000042354.8_30734390_30740975_1	chr14	-	1813	15	FSM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	134	0	0	0	multi-exon	TRUE	canonical	3	775	junction_10	82.9678140200482	3898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30740975	30734389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ENSMUSG00000042354.8_30734390_30740975_2	chr14	-	1827	15	NIC	ENSMUSG00000042354.8	novel	1765	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_10	231.923511757912	3882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30740975	30734389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738769_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ENSMUSG00000042357.3_127248991_127251974_1	chr4	-	1332	2	FSM	ENSMUSG00000042357.3	ENSMUST00000046498.3	1721	2	0	389	0	-389	multi-exon	FALSE	canonical	3	573	junction_1	0	2641	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGGTGTCCTTTGGGTC	404	False	NA	-9	True	AATAAA	-19	NA	127251974	127248990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_127250167_127251818
ENSMUSG00000042363.15_20775589_20781024_1	chr11	-	1317	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	32	2013	-2	761	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAACTTTTGTTTGCATT	NA	False	NA	NA	False	GATAAA	-23	NA	20781024	20775588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
ENSMUSG00000042363.15_20776106_20781024_1	chr11	-	800	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	32	2530	-2	244	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTGTGATGATTTGTG	NA	False	NA	NA	False	AATACA	-33	NA	20781024	20776105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
ENSMUSG00000042364.12_113728715_113753645_1	chr13	-	2992	2	FSM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	1455	0	1455	0	multi-exon	FALSE	canonical	3	496	junction_1	0	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTTGTCTTTTATTTCTA	NA	False	NA	0	True	AATAAA	-21	NA	113753645	113728714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_113731399_113753337
ENSMUSG00000042367.13_127219028_127224413_1	chr4	-	1099	3	NNC	ENSMUSG00000042367.13	novel	1880	2	NA	NA	224	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	468	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	False	NA	-5	True	AATAAA	-17	NA	127224413	127219027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_127219156_127219712_127220565_127224294
ENSMUSG00000042369.9_76200705_76214112_1	chr2	+	1521	10	FSM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	377	0	377	0	multi-exon	FALSE	canonical	3	321	junction_1	22.7991769398766	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGACTTATTTATATGAA	NA	False	NA	55	True	AATAAA	-21	NA	76200704	76214112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
ENSMUSG00000042380.9_127137577_127141399_1	chr4	+	819	2	FSM	ENSMUSG00000042380.9	ENSMUST00000142029.2	1022	2	0	203	0	-203	multi-exon	FALSE	canonical	3	445	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTTTCTTATTTTCCT	NA	False	NA	15	True	NA	NA	NA	127137576	127141399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_127137692_127140695
ENSMUSG00000042388.15_127093408_127094572_1	chr4	+	623	3	NNC	ENSMUSG00000042388.15	novel	2901	10	NA	NA	-3691	-13975	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	82.5	31	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTAATCTTGGCACTT	NA	False	NA	NA	False	NA	NA	NA	127093407	127094572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_127093672_127094056_127094130_127094286
ENSMUSG00000042389.14_115521667_115555297_1	chr6	+	1690	11	NIC	ENSMUSG00000042389.14	novel	2106	12	NA	NA	0	-292	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	74.5318723768563	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTTTGAGAGAATAAATG	NA	False	NA	14	True	AATAAA	-14	NA	115521666	115555297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_115521690_115524782_115524992_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
ENSMUSG00000042390.10_90200668_90265386_1	chr3	+	1927	11	FSM	ENSMUSG00000042390.10	ENSMUST00000199754.5	7438	11	183	5328	0	0	multi-exon	FALSE	canonical	3	14	junction_1	3.87814388593306	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGTACTGGTGCCTAC	NA	False	NA	NA	False	NA	NA	NA	90200667	90265386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_90200732_90248962_90249302_90255873_90256004_90256661_90256794_90257693_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262981_90263093_90263437_90263556_90265175
ENSMUSG00000042396.11_48400489_48406599_1	chr9	-	1392	6	FSM	ENSMUSG00000042396.11	ENSMUST00000214923.2	1867	6	-5	480	0	-480	multi-exon	FALSE	canonical	0	0	junction_4	182.483314305719	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCAGTCATCTGCTTAT	NA	False	NA	-10	True	AATAAA	-14	NA	48406599	48400488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48405582_48405688_48406454
ENSMUSG00000042401.9_42271971_42295547_1	chr19	-	1201	10	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	-19154	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_9	18.8325958557674	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTTGTGGAAAACTAT	2537	False	NA	-17	True	AATAAA	-17	NA	42295547	42271970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42295464
ENSMUSG00000042401.9_42271971_42295657_1	chr19	-	1311	10	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	-19264	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_9	18.8325958557674	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTTGTGGAAAACTAT	2427	False	NA	-17	True	AATAAA	-17	NA	42295657	42271970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42295464
ENSMUSG00000042406.9_80139724_80141742_1	chr15	+	1386	3	FSM	ENSMUSG00000042406.9	ENSMUST00000109605.5	1725	3	339	0	0	0	multi-exon	FALSE	canonical	3	1292	junction_2	43	14012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGGTTTTCAGTGT	4484	False	NA	32	True	AATAAA	-20	NA	80139723	80141742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_80139887_80140407_80140723_80140834
ENSMUSG00000042426.7_113064182_113068066_1	chr13	+	1091	3	FSM	ENSMUSG00000042426.7	ENSMUST00000223866.2	1736	3	0	645	0	-645	multi-exon	FALSE	canonical	3	291	junction_2	16	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATAGAAAAATGTGTACT	NA	False	NA	NA	False	ATTAAA	-22	NA	113064181	113068066	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_113064508_113066160_113066235_113067375
ENSMUSG00000042426.7_113064182_113105966_1	chr13	+	4488	27	FSM	ENSMUSG00000042426.7	ENSMUST00000038574.7	4682	27	194	0	0	0	multi-exon	TRUE	canonical	3	222	junction_12	28.2580040501697	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCCATCTCTGTGT	NA	False	NA	18	True	AATAAA	-18	NA	113064181	113105966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ENSMUSG00000042472.12_84363892_84390498_1	chr12	+	2367	12	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	58.2940678552067	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1849	False	NA	12	True	AATAAA	-17	NA	84363891	84390498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_84363984_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ENSMUSG00000042472.12_84363892_84390498_2	chr12	+	2016	10	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	65.7317782101372	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1849	False	NA	12	True	AATAAA	-17	NA	84363891	84390498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_84363949_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ENSMUSG00000042472.12_84363892_84390498_3	chr12	+	2332	12	FSM	ENSMUSG00000042472.12	ENSMUST00000045931.12	2597	12	266	-1	0	1	multi-exon	FALSE	canonical	3	183	junction_3	18.7929123266993	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1849	False	NA	12	True	AATAAA	-17	NA	84363891	84390498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ENSMUSG00000042502.11_126792830_126795139_1	chr7	-	1253	7	FSM	ENSMUSG00000042502.11	ENSMUST00000166791.8	3284	7	33	1998	-1	0	multi-exon	FALSE	canonical	3	356	junction_6	93.763295353542	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCCTTTTGGCTTCAC	5491	False	NA	-4	True	AATAAA	-40	NA	126795139	126792829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
ENSMUSG00000042502.11_126792830_126795139_2	chr7	-	1267	7	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_6	198.070413966571	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCCTTTTGGCTTCAC	5491	False	NA	-4	True	AATAAA	-40	NA	126795139	126792829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795086
ENSMUSG00000042508.17_9151173_9168990_1	chr5	-	916	4	NIC	ENSMUSG00000042508.17	novel	3453	17	NA	NA	1741	17628	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCGGGGGCCCCTGGCC	NA	False	NA	NA	False	NA	NA	NA	9168990	9151172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_9151396_9166479_9166531_9167458_9167564_9168453
ENSMUSG00000042508.17_9151264_9169045_1	chr5	-	880	4	NIC	ENSMUSG00000042508.17	novel	3453	17	NA	NA	1686	17537	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAAGTCCGGACGCCCGCC	NA	False	NA	NA	False	NA	NA	NA	9169045	9151263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_9151396_9166479_9166531_9167458_9167564_9168453
ENSMUSG00000042508.17_9151365_9169045_1	chr5	-	779	4	NIC	ENSMUSG00000042508.17	novel	3453	17	NA	NA	1686	17436	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGGCCGCTGGTCCC	NA	False	NA	NA	False	NA	NA	NA	9169045	9151364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_9151396_9166479_9166531_9167458_9167564_9168453
ENSMUSG00000042520.17_89913527_89959782_1	chr3	-	3421	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	320	junction_1	177.654063843189	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3547	False	NA	-4	True	AATAAA	-19	NA	89959782	89913526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ENSMUSG00000042520.17_89916563_89959782_1	chr3	-	2819	24	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	0	-3036	combination_of_known_junctions	FALSE	canonical	3	204	junction_19	234.325206619917	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACCAGACGCAGACTCAC	3547	False	NA	NA	False	NA	NA	NA	89959782	89916562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ENSMUSG00000042520.17_89916563_89959782_2	chr3	-	2804	24	ISM	ENSMUSG00000042520.17	ENSMUST00000199834.5	3494	26	40	3036	0	-3036	5prime_fragment	FALSE	canonical	3	204	junction_19	200.722004900852	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACCAGACGCAGACTCAC	3547	False	NA	NA	False	NA	NA	NA	89959782	89916562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ENSMUSG00000042520.17_89916563_89959782_3	chr3	-	2771	24	ISM	ENSMUSG00000042520.17	ENSMUST00000196843.5	3975	28	-13	8963	0	-3036	5prime_fragment	FALSE	canonical	3	641	junction_15	125.857031740635	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACCAGACGCAGACTCAC	3547	False	NA	NA	False	NA	NA	NA	89959782	89916562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ENSMUSG00000042541.11_6558288_6578663_1	chr6	-	483	3	FSM	ENSMUSG00000042541.11	ENSMUST00000041111.10	1472	3	-5	994	0	-994	multi-exon	FALSE	canonical	3	3186	junction_2	110.5	19298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGGTTCAGATGTCT	22	False	6578685	-12	True	AATAAA	-14	NA	6578663	6558287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_6558492_6560407_6560502_6578478
ENSMUSG00000042557.15_56979324_57005464_1	chr9	+	1400	9	NIC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	0	300	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	101.431935306392	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAATAACAAGCCACAGAG	NA	False	NA	NA	False	NA	NA	NA	56979323	57005464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_56979348_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389
ENSMUSG00000042557.15_56983660_57005548_1	chr9	+	1715	9	ISM	ENSMUSG00000042557.15	ENSMUST00000168678.8	5206	22	0	30100	0	384	5prime_fragment	FALSE	canonical	3	44	junction_1	97.6037108669542	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCGTAGGCAGGTAGAA	NA	False	NA	NA	False	NA	NA	NA	56983659	57005548	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_56983915_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389
ENSMUSG00000042557.15_56983660_57035437_1	chr9	+	1064	2	NNC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	0	-211	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTCTAGCTTCTTGT	NA	False	NA	21	True	ATTAAA	-25	NA	56983659	57035437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_56983760_57034473
ENSMUSG00000042557.15_56983660_57035650_1	chr9	+	1277	2	NNC	ENSMUSG00000042557.15	novel	5086	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGTCCCTTGTCCTC	NA	False	NA	NA	False	AATAAA	-24	NA	56983659	57035650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_56983760_57034473
ENSMUSG00000042569.14_60721505_60748972_1	chr11	+	1257	7	NNC	ENSMUSG00000042569.14	novel	3277	7	NA	NA	0	-277	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	85.6536955160462	1483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACCATGTACAGGTCT	NA	False	NA	34	True	AATAAA	-31	NA	60721504	60748972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_60721587_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
ENSMUSG00000042569.14_60721505_60748972_2	chr11	+	1228	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	48	277	0	-277	multi-exon	FALSE	canonical	3	194	junction_1	30.3845721085919	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACCATGTACAGGTCT	NA	False	NA	34	True	AATAAA	-31	NA	60721504	60748972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
ENSMUSG00000042570.15_79376080_79390930_1	chr10	-	550	4	NNC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.5034164557044	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390930	79376079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_79376440_79385437_79385514_79386149_79386241_79390907
ENSMUSG00000042590.18_106930947_107073453_2	chr13	-	4307	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	115.519794104579	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	-6	True	ATTAAA	-19	NA	107073453	106930946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013447_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ENSMUSG00000042590.18_106931973_107073453_1	chr13	-	3286	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	0	-1018	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	115.519794104579	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAGTCAGAAAACTATT	NA	False	NA	-25	True	NA	NA	NA	107073453	106931972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012793_107013447_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ENSMUSG00000042606.10_126461611_126464295_1	chr7	+	2045	7	FSM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	467	254	0	205	multi-exon	FALSE	canonical	3	171	junction_2	39.0498257216199	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATTGGTCCCAAACCG	1943	False	NA	47	True	AATAAA	-21	NA	126461610	126464295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
ENSMUSG00000042616.9_125952358_125982457_1	chr4	+	1482	10	FSM	ENSMUSG00000042616.9	ENSMUST00000035497.5	5013	10	0	3531	0	0	multi-exon	FALSE	canonical	3	15	junction_8	4.26296135405575	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTTCCCCATTATTCTC	2363	False	NA	7	True	AATATA	-17	NA	125952357	125982457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_125952586_125967597_125967753_125970509_125970678_125971128_125971210_125976674_125976779_125977388_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
ENSMUSG00000042626.14_89325878_89336406_1	chr3	+	2038	12	NIC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_1	129.584906273394	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCACGCCTTTAATCACAGC	NA	False	NA	NA	False	NA	NA	NA	89325877	89336406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_89326017_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ENSMUSG00000042626.14_89325878_89337322_1	chr3	+	2954	12	NIC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_1	129.584906273394	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89325877	89337322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_89326017_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ENSMUSG00000042628.9_83593623_83653250_1	chr12	-	2946	11	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9254	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	38.7479031690748	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCCATCGTATGGATC	NA	False	NA	NA	False	TTTAAA	-3	NA	83653250	83593622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83653189
ENSMUSG00000042632.18_79170432_79212453_1	chr15	-	2863	16	NIC	ENSMUSG00000042632.18	novel	2943	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	51.8533830461748	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTCATTGTACAGTGT	NA	False	NA	-14	True	AATAAA	-12	NA	79212453	79170431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212409
ENSMUSG00000042642.14_89309974_89319170_1	chr3	-	2194	8	FSM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	0	698	0	0	multi-exon	FALSE	canonical	3	214	junction_7	45.7504321380282	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCTTCTGCTGAGCTGC	3744	False	NA	NA	False	AATAAA	-21	NA	89319170	89309973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319090
ENSMUSG00000042642.14_89310389_89319170_1	chr3	-	1779	8	FSM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	0	1113	0	-415	multi-exon	FALSE	canonical	3	214	junction_7	45.7504321380282	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3744	False	NA	-15	True	AGTAAA	-18	NA	89319170	89310388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319090
ENSMUSG00000042642.14_89310389_89319170_2	chr3	-	1745	8	NIC	ENSMUSG00000042642.14	novel	2892	8	NA	NA	0	-415	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	105.155666921542	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3744	False	NA	-15	True	AGTAAA	-18	NA	89319170	89310388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319124
ENSMUSG00000042647.14_121736451_121757006_1	chr5	-	2139	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-5	-1483	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7846483061999	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTCTACTTCCTATG	NA	False	NA	-1	True	NA	NA	NA	121757006	121736450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
ENSMUSG00000042660.9_36896728_36899287_1	chr18	+	1485	4	NIC	ENSMUSG00000042660.9	novel	1619	7	NA	NA	1017	2424	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTCCACGCCCCCTCAA	NA	False	NA	NA	False	NA	NA	NA	36896727	36899287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_36897541_36898148_36898611_36898945_36899064_36899195
ENSMUSG00000042670.6_105734983_105795763_1	chr2	+	681	6	NIC	ENSMUSG00000042670.6	novel	955	7	NA	NA	0	-140	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	170.067516004674	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATTTATGTTTTAAAT	NA	False	NA	14	True	AATAAA	-15	NA	105734982	105795763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_105735076_105738668_105738775_105763609_105763699_105767336_105767464_105794524_105794636_105795608
ENSMUSG00000042670.6_105734983_105795763_2	chr2	+	815	7	FSM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	0	140	0	-140	multi-exon	FALSE	canonical	3	400	junction_1	38.970073988468	2136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATTTATGTTTTAAAT	NA	False	NA	14	True	AATAAA	-15	NA	105734982	105795763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794524_105794636_105795608
ENSMUSG00000042682.11_29690265_29696797_1	chr14	+	856	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	0	822	0	0	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	2256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGGTTGGTTTTG	NA	False	NA	11	True	AATAAA	-22	NA	29690264	29696797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
ENSMUSG00000042682.11_29690393_29696797_1	chr14	+	728	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	128	822	0	0	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	1893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGGTTGGTTTTG	NA	False	NA	11	True	AATAAA	-22	NA	29690392	29696797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
ENSMUSG00000042682.11_29690393_29696797_2	chr14	+	727	5	NNC	ENSMUSG00000042682.11	novel	799	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	413.831185388438	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGGTTGGTTTTG	NA	False	NA	11	True	AATAAA	-22	NA	29690392	29696797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_29690498_29691987_29692074_29693744_29693829_29695317_29695405_29696432
ENSMUSG00000042682.11_29690393_29696974_1	chr14	+	905	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	128	645	0	177	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	2910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGTAAATTTGCTTTT	NA	False	NA	34	True	AATAAA	-23	NA	29690392	29696974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
ENSMUSG00000042688.17_75294068_75317308_1	chr9	-	4211	6	FSM	ENSMUSG00000042688.17	ENSMUST00000049355.11	4072	6	-21	-118	-21	116	multi-exon	FALSE	canonical	3	266	junction_5	19.2727787306346	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCCTGTTTGACTCTTT	NA	False	NA	-26	True	AATAAA	-16	NA	75317308	75294067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317144
ENSMUSG00000042705.10_47091932_47220494_1	chr18	+	993	7	FSM	ENSMUSG00000042705.10	ENSMUST00000049388.9	1610	7	49	568	0	219	multi-exon	FALSE	canonical	3	1216	junction_3	103.11913282973	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTCCCCAACCCTCCC	NA	False	NA	NA	False	NA	NA	NA	47091931	47220494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47219318_47219379_47220094
ENSMUSG00000042705.10_47091932_47221062_1	chr18	+	1450	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234701.2	528	6	-15	-907	0	0	multi-exon	FALSE	canonical	3	144	junction_2	502.986441169143	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCGTACAATGTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	47091931	47221062	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_47091996_47093482_47093574_47100806_47100963_47123545_47123657_47219318_47219379_47220094
ENSMUSG00000042705.10_47091932_47221062_2	chr18	+	1405	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234280.2	600	6	-10	-795	0	0	multi-exon	FALSE	canonical	3	187	junction_3	477.712298355401	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCGTACAATGTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	47091931	47221062	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47123545_47123657_47219318_47219379_47220094
ENSMUSG00000042707.7_124923851_124949173_1	chr4	-	2297	16	NNC	ENSMUSG00000042707.7	novel	2133	6	NA	NA	10323	25280	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1835	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGTGAAGCACGTTGG	NA	False	NA	NA	False	NA	NA	NA	124949173	124923850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942146_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ENSMUSG00000042707.7_124923851_124949173_2	chr4	-	2304	16	NIC	ENSMUSG00000042707.7	novel	2133	6	NA	NA	10323	25280	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1894	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGTGAAGCACGTTGG	NA	False	NA	NA	False	NA	NA	NA	124949173	124923850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ENSMUSG00000042709.16_60291452_60307863_1	chr11	-	1648	9	NIC	ENSMUSG00000042709.16	novel	719	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	146.351460532514	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGGTCTAAGCAGTT	NA	False	NA	0	True	NA	NA	NA	60307863	60291451	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307811
ENSMUSG00000042709.16_60291690_60307863_1	chr11	-	1561	8	FSM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	14	238	-1	-226	multi-exon	FALSE	canonical	3	286	junction_1	36.2902134443535	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCCTGGCTTTTCATCA	NA	False	NA	NA	False	NA	NA	NA	60307863	60291689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ENSMUSG00000042709.16_60291868_60307863_2	chr11	-	1383	8	FSM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	14	416	-1	-404	multi-exon	FALSE	canonical	3	286	junction_1	36.2902134443535	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATCAAGCCTCATTTTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	60307863	60291867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ENSMUSG00000042719.18_121536057_121578207_1	chr5	+	3124	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	58	2265	0	213	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGACCCTCATCTGGGTT	NA	False	NA	34	True	ATTAAA	-39	NA	121536056	121578207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ENSMUSG00000042747.13_89153741_89157030_1	chr3	+	521	5	FSM	ENSMUSG00000042747.13	ENSMUST00000040888.12	1172	5	468	183	0	1	multi-exon	FALSE	canonical	3	1428	junction_1	178.055293378209	13182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	7591	False	NA	21	True	AATAAA	-15	NA	89153740	89157030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89153823_89154084_89154240_89154371_89154436_89156380_89156448_89156877
ENSMUSG00000042751.15_152966096_152992493_1	chr1	+	1619	5	ISM	ENSMUSG00000042751.15	ENSMUST00000043313.15	4626	11	135347	2514	-3130	-2417	3prime_fragment	FALSE	canonical	3	59	junction_1	77.8985718739439	562	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTTCTTGCAAAGCAAT	NA	False	NA	NA	False	NA	NA	NA	152966095	152992493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_152966288_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ENSMUSG00000042751.15_152969226_152973865_1	chr1	+	533	3	NNC	ENSMUSG00000042751.15	novel	539	3	NA	NA	0	3522	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	79.5	871	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGCGTCCCACATTCTT	NA	False	NA	30	True	NA	NA	NA	152969225	152973865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_152969301_152969782_152969860_152973484
ENSMUSG00000042759.13_126187203_126188284_1	chr7	+	988	2	ISM	ENSMUSG00000042759.13	ENSMUST00000138558.3	614	3	951	-667	357	0	3prime_fragment	FALSE	canonical	3	9	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGTAAGGACTGGAGG	NA	False	NA	NA	False	NA	NA	NA	126187202	126188284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_126187335_126187428
ENSMUSG00000042763.10_124745509_124749035_1	chr4	-	1123	4	NIC	ENSMUSG00000042763.10	novel	2727	4	NA	NA	6929	3523	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTACTCTCACCTGACAG	3143	False	NA	NA	False	NA	NA	NA	124749035	124745508	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_124745601_124745692_124745813_124747666_124747810_124748267
ENSMUSG00000042790.17_45775588_45817680_1	chr9	-	2688	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	495	781	5	0	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTCCATTTCTCCCACCA	9615	False	NA	NA	False	AGTAAA	-27	NA	45817680	45775587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ENSMUSG00000042797.10_97375586_97387225_1	chr7	-	1093	3	FSM	ENSMUSG00000042797.10	ENSMUST00000206389.2	3737	3	271	2373	-80	0	multi-exon	FALSE	canonical	3	30	junction_1	4.5	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTAGTAACTGTGAT	NA	False	NA	-1	True	ATTAAA	-43	NA	97387225	97375585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_97375912_97378177_97378295_97386575
ENSMUSG00000042808.11_76839107_76842168_1	chr12	-	909	2	FSM	ENSMUSG00000042808.11	ENSMUST00000082431.6	1010	2	105	-4	103	0	multi-exon	FALSE	canonical	3	177	junction_1	0	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTCTCTGTCTTCCTTT	NA	False	NA	-1	True	AATAAA	-20	NA	76842168	76839106	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_76839775_76841927
ENSMUSG00000042810.15_48372632_48393835_1	chr6	+	3926	18	FSM	ENSMUSG00000042810.15	ENSMUST00000114572.9	4323	18	-168	565	0	2	multi-exon	FALSE	canonical	3	26	junction_1	12.6595014032365	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGGCCATTGGCTTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	48372631	48393835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_48372822_48379817_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ENSMUSG00000042831.14_30008202_30012463_1	chr7	+	1069	5	ISM	ENSMUSG00000042831.14	ENSMUST00000132193.8	1112	6	-11	1265	0	342	5prime_fragment	FALSE	canonical	3	431	junction_1	14.8576579581036	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTACTTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	30008201	30012463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661
ENSMUSG00000042831.14_30008202_30013729_1	chr7	+	1119	6	NNC	ENSMUSG00000042831.14	novel	982	7	NA	NA	0	0	intron_retention	FALSE	canonical	2	10	junction_5	175.104997073185	1212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	30008201	30013729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30012133_30013348
ENSMUSG00000042831.14_30008202_30013729_2	chr7	+	1250	7	NIC	ENSMUSG00000042831.14	novel	982	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_5	204.263446449813	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	30008201	30013729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30012133_30012897_30013024_30013343
ENSMUSG00000042831.14_30008202_30013729_3	chr7	+	1045	5	NIC	ENSMUSG00000042831.14	novel	982	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_1	201.561870154055	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	30008201	30013729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_30008260_30009410_30009480_30011264_30011326_30011661_30012133_30013343
ENSMUSG00000042831.14_30008202_30013729_4	chr7	+	949	7	NNC	ENSMUSG00000042831.14	novel	982	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	171.158471079354	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	30008201	30013729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30011988_30012133_30013343
ENSMUSG00000042834.16_33570072_33596927_1	chr18	-	2030	5	FSM	ENSMUSG00000042834.16	ENSMUST00000168890.2	2185	5	155	0	-20	0	multi-exon	FALSE	canonical	3	35	junction_4	6.79613860953409	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTTTGGCTCATTATT	NA	False	NA	-4	True	AATAAA	-20	NA	33596927	33570071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596473_33596905
ENSMUSG00000042870.16_75760333_75796132_1	chr8	+	1650	15	FSM	ENSMUSG00000042870.16	ENSMUST00000165630.3	2267	15	0	617	0	1	multi-exon	FALSE	canonical	3	248	junction_1	29.4884965464743	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTTCTCTTCTCCCAG	NA	False	NA	NA	False	ATTAAA	-23	NA	75760332	75796132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
ENSMUSG00000042901.11_183078593_183104464_1	chr1	+	2412	10	FSM	ENSMUSG00000042901.11	ENSMUST00000109166.8	4279	10	0	1867	0	0	multi-exon	FALSE	canonical	3	74	junction_8	45.1526901978029	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGGATGGTTGTTACA	NA	False	NA	NA	False	AATAAA	-13	NA	183078592	183104464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
ENSMUSG00000042901.11_183078871_183104464_1	chr1	+	2134	10	FSM	ENSMUSG00000042901.11	ENSMUST00000109166.8	4279	10	278	1867	0	0	multi-exon	FALSE	canonical	3	74	junction_8	45.1526901978029	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGGATGGTTGTTACA	NA	False	NA	NA	False	AATAAA	-13	NA	183078870	183104464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
ENSMUSG00000043004.14_19925539_19985326_1	chr14	-	700	3	NNC	ENSMUSG00000043004.14	novel	458	3	NA	NA	41435	184	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	66.5	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGCTGACATTCTGGT	NA	False	NA	-22	True	AATAAA	-26	NA	19985326	19925538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_19926004_19941353_19941470_19985207
ENSMUSG00000043004.14_19925539_20027127_1	chr14	-	724	4	FSM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	190	2912	0	184	multi-exon	FALSE	canonical	3	84	junction_3	22.3755819291179	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGCTGACATTCTGGT	NA	False	NA	-22	True	AATAAA	-26	NA	20027127	19925538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025
ENSMUSG00000043061.11_30634425_30641218_1	chr12	+	2954	6	NNC	ENSMUSG00000043061.11	novel	2971	5	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	3	92	junction_5	34.3941855551196	665	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGTGCTTTCGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	30634424	30641218	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_30634562_30635468_30635590_30637198_30637254_30638472_30638567_30638650_30640574_30640594
ENSMUSG00000043065.13_44167777_44207600_2	chr16	+	3074	18	FSM	ENSMUSG00000043065.13	ENSMUST00000050897.7	4627	18	293	1260	0	94	multi-exon	FALSE	canonical	0	0	junction_1	35.5942143737688	514	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	6401	False	NA	18	True	AATAAA	-23	NA	44167776	44207600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ENSMUSG00000043085.15_141341544_141345344_1	chr4	-	1441	6	FSM	ENSMUSG00000043085.15	ENSMUST00000143154.8	2898	6	600	857	-52	0	multi-exon	FALSE	canonical	3	10	junction_2	37.2526509123847	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCGTTGAGGATCACAGT	NA	False	NA	-4	True	AATAAA	-16	NA	141345344	141341543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_141342018_141342255_141342422_141343514_141343933_141344605_141344781_141344950_141345024_141345209
ENSMUSG00000043085.15_141341544_141345344_2	chr4	-	3181	5	NNC	ENSMUSG00000043085.15	novel	1671	6	NA	NA	-52	0	intron_retention	TRUE	non_canonical	0	0	junction_2	45.5686295602578	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCGTTGAGGATCACAGT	NA	False	NA	-4	True	AATAAA	-16	NA	141345344	141341543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_141342018_141342255_141344421_141344446_141344781_141344950_141345024_141345209
ENSMUSG00000043090.19_70217450_70227543_1	chr8	-	2270	4	FSM	ENSMUSG00000043090.19	ENSMUST00000137573.2	3245	4	18	957	18	-957	multi-exon	FALSE	canonical	3	29	junction_1	2.44948974278318	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGCTCAATAAGCCCAATT	6887	False	NA	NA	False	NA	NA	NA	70227543	70217449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70219428_70220282_70220344_70221770_70221898_70227439
ENSMUSG00000043091.10_98830152_98935994_1	chr15	+	1167	2	Genic_Genomic	ENSMUSG00000043091.10	novel	1982	4	NA	NA	-97620	3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCATCTGGTTCATAGCT	NA	False	NA	18	True	AATAAA	-25	NA	98830151	98935994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_98830299_98934974
ENSMUSG00000043091.10_98928202_98935207_1	chr15	+	768	4	FSM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	430	784	0	-784	multi-exon	FALSE	canonical	3	774	junction_1	4660.1984459415	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACACCAACCTTAACCGC	NA	False	NA	NA	False	NA	NA	NA	98928201	98935207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_98928306_98931974_98932198_98932329_98932479_98934915
ENSMUSG00000043091.10_98928202_98935994_1	chr15	+	206	2	NNC	ENSMUSG00000043091.10	novel	781	3	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCATCTGGTTCATAGCT	NA	False	NA	18	True	AATAAA	-25	NA	98928201	98935994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_98928297_98935883
ENSMUSG00000043091.10_98928202_98935994_2	chr15	+	1546	4	NNC	ENSMUSG00000043091.10	novel	1982	4	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2450.08040684382	12324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCATCTGGTTCATAGCT	NA	False	NA	18	True	AATAAA	-25	NA	98928201	98935994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_98928306_98931974_98932198_98932329_98932479_98934924
ENSMUSG00000043091.10_98928202_98935994_3	chr15	+	1559	4	NNC	ENSMUSG00000043091.10	novel	781	3	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2450.08040684382	12290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCATCTGGTTCATAGCT	NA	False	NA	18	True	AATAAA	-25	NA	98928201	98935994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_98928306_98931974_98932198_98932329_98932492_98934924
ENSMUSG00000043131.15_83303018_83309607_1	chr6	+	571	3	ISM	ENSMUSG00000043131.15	ENSMUST00000146420.7	749	4	18	1818	0	78	5prime_fragment	FALSE	canonical	3	307	junction_1	28.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTATCTGTTTATTC	NA	False	NA	NA	False	AATAAA	-3	NA	83303017	83309607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_83303250_83306848_83307016_83309435
ENSMUSG00000043162.8_57666016_57669063_1	chr6	-	1118	2	FSM	ENSMUSG00000043162.8	ENSMUST00000053386.6	3573	2	0	2455	0	-2455	multi-exon	FALSE	canonical	3	182	junction_1	0	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTTTGCAGTGGTGGA	NA	False	NA	NA	False	AATAAA	-27	NA	57669063	57666015	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_57666864_57668793
ENSMUSG00000043162.8_57666418_57669063_1	chr6	-	716	2	FSM	ENSMUSG00000043162.8	ENSMUST00000053386.6	3573	2	0	2857	0	-2857	multi-exon	FALSE	canonical	3	182	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCATAGCCGGGACAGCA	NA	False	NA	NA	False	NA	NA	NA	57669063	57666417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_57666864_57668793
ENSMUSG00000043183.19_54699031_54713169_1	chr13	+	2619	10	NNC	ENSMUSG00000043183.19	novel	4819	10	NA	NA	4435	14066	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1033	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCAGGTCGCGCGAGACC	NA	False	NA	NA	False	NA	NA	NA	54699030	54713169	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_54699900_54699928_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
ENSMUSG00000043183.19_54699031_54713169_3	chr13	+	2147	5	NIC	ENSMUSG00000043183.19	novel	2116	9	NA	NA	4435	14066	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCAGGTCGCGCGAGACC	NA	False	NA	NA	False	NA	NA	NA	54699030	54713169	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54712994
ENSMUSG00000043190.15_76150886_76166681_1	chr13	-	1081	4	FSM	ENSMUSG00000043190.15	ENSMUST00000179078.9	1436	4	108	247	0	0	multi-exon	FALSE	canonical	0	0	junction_3	36.2981481009094	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGTAATTTTGTTTC	NA	False	NA	-9	True	NA	NA	NA	76166681	76150885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76166133
ENSMUSG00000043190.15_76150886_76166681_2	chr13	-	1008	4	NNC	ENSMUSG00000043190.15	novel	2807	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	34.4125300177453	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGTAATTTTGTTTC	NA	False	NA	-9	True	NA	NA	NA	76166681	76150885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_76151208_76156101_76156137_76156229_76156406_76166206
ENSMUSG00000043190.15_76150886_76166681_3	chr13	-	1575	4	FSM	ENSMUSG00000043190.15	ENSMUST00000050997.2	2807	4	0	1232	0	0	multi-exon	FALSE	canonical	3	34	junction_3	20.2703943940144	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGTAATTTTGTTTC	NA	False	NA	-9	True	NA	NA	NA	76166681	76150885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76165639
ENSMUSG00000043190.15_76150886_76166789_1	chr13	-	1189	4	FSM	ENSMUSG00000043190.15	ENSMUST00000179078.9	1436	4	0	247	0	0	multi-exon	FALSE	canonical	0	0	junction_3	36.2981481009094	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGTAATTTTGTTTC	NA	False	NA	-9	True	NA	NA	NA	76166789	76150885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76166133
ENSMUSG00000043284.13_60755278_60769613_1	chr11	-	972	2	FSM	ENSMUSG00000043284.13	ENSMUST00000062677.12	1457	2	485	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	0	2380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTCTCTTTTCTGCC	7834	False	NA	-5	True	ATTAAA	-17	NA	60769613	60755277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_60756175_60769538
ENSMUSG00000043284.13_60755278_60769613_2	chr11	-	1260	3	FSM	ENSMUSG00000043284.13	ENSMUST00000168218.8	1511	3	251	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	10	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTCTCTTTTCTGCC	7834	False	NA	-5	True	ATTAAA	-17	NA	60769613	60755277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_60756175_60766585_60766874_60769538
ENSMUSG00000043284.13_60755278_60769613_3	chr11	-	970	2	NNC	ENSMUSG00000043284.13	novel	1457	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTCTCTTTTCTGCC	7834	False	NA	-5	True	ATTAAA	-17	NA	60769613	60755277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_60756175_60769540
ENSMUSG00000043284.13_60755278_60769864_1	chr11	-	1223	2	FSM	ENSMUSG00000043284.13	ENSMUST00000062677.12	1457	2	234	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	0	2430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTCTCTTTTCTGCC	7583	False	NA	-5	True	ATTAAA	-17	NA	60769864	60755277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_60756175_60769538
ENSMUSG00000043300.3_69481248_69506293_1	chr3	-	2271	3	FSM	ENSMUSG00000043300.3	ENSMUST00000061826.3	2028	3	0	-243	0	243	multi-exon	FALSE	canonical	3	41	junction_2	5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACCATGGAGTTGGGAG	NA	False	NA	3	True	AATAAA	-21	NA	69506293	69481247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_69483294_69486658_69486725_69506134
ENSMUSG00000043372.13_103024140_103030017_2	chr11	+	1256	3	FSM	ENSMUSG00000043372.13	ENSMUST00000062530.5	1910	3	-31	685	0	0	multi-exon	FALSE	canonical	3	4	junction_1	11.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGTGGCTACAATTGA	NA	False	NA	NA	False	ATTAAA	-18	NA	103024139	103030017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_103024284_103024860_103024968_103029012
ENSMUSG00000043411.16_137321539_137383654_1	chr4	+	3513	28	FSM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	21	2188	0	12	multi-exon	FALSE	canonical	3	555	junction_19	271.050863574936	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	591	False	NA	20	True	AATAAA	-32	NA	137321538	137383654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ENSMUSG00000043419.12_69231635_69233467_1	chr11	+	1733	2	FSM	ENSMUSG00000043419.12	ENSMUST00000129321.2	2081	2	348	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGAAAGACTGTTATTG	NA	False	NA	10	True	AATAAA	-19	NA	69231634	69233467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69231885_69231984
ENSMUSG00000043488.6_5901314_5925267_1	chr19	+	2885	11	NIC	ENSMUSG00000043488.6	novel	516	2	NA	NA	2778	23851	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGCACAAACCCGAGGC	NA	False	NA	NA	False	NA	NA	NA	5901313	5925267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924823_5925118
ENSMUSG00000043510.13_110976947_110987643_1	chr5	-	648	5	NIC	ENSMUSG00000043510.13	novel	804	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	167.865087198023	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGCTTCTGCTAATTG	NA	False	NA	-8	True	AATAAA	-13	NA	110987643	110976946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_110977078_110978801_110978850_110983845_110983936_110984172_110984270_110987361
ENSMUSG00000043510.13_110976947_110987643_2	chr5	-	798	6	NIC	ENSMUSG00000043510.13	novel	804	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	141.291754890369	2478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGCTTCTGCTAATTG	NA	False	NA	-8	True	AATAAA	-13	NA	110987643	110976946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_110977078_110978801_110978850_110982520_110982666_110983840_110983936_110984172_110984270_110987361
ENSMUSG00000043541.17_145106493_145120654_1	chr6	-	1393	9	NIC	ENSMUSG00000043541.17	novel	4308	12	NA	NA	30419	14067	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTATGCAAAGCCATGGT	2073	False	NA	NA	False	NA	NA	NA	145120654	145106492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ENSMUSG00000043602.6_70655273_70663754_1	chr11	+	1823	2	FSM	ENSMUSG00000043602.6	ENSMUST00000060444.6	2061	2	238	0	238	0	multi-exon	FALSE	canonical	3	29	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTCTGGCCTTTCCTT	108	False	NA	18	True	ATTAAA	-26	NA	70655272	70663754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70655376_70662034
ENSMUSG00000043623.8_60187331_60215133_1	chr19	+	1226	7	Genic_Genomic	ENSMUSG00000043623.8	novel	1343	2	NA	NA	-27435	-977	multi-exon	FALSE	non_canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGCTCGGGCGGATCAG	NA	False	NA	NA	False	NA	NA	NA	60187330	60215133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr19_+_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60215075
ENSMUSG00000043629.13_52961893_52992003_1	chr1	-	3231	2	FSM	ENSMUSG00000043629.13	ENSMUST00000050567.11	3641	2	0	410	0	-410	multi-exon	FALSE	canonical	3	220	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTATCAAGCTGTCTC	680	False	NA	NA	False	NA	NA	NA	52992003	52961892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_52964894_52991773
ENSMUSG00000043629.13_52964347_52992003_1	chr1	-	777	2	FSM	ENSMUSG00000043629.13	ENSMUST00000050567.11	3641	2	0	2864	0	0	multi-exon	FALSE	canonical	3	220	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCATGTCTATGATATTAA	680	False	NA	-4	True	AATACA	-14	NA	52992003	52964346	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_52964894_52991773
ENSMUSG00000043633.7_43663920_43664429_1	chr4	-	429	2	NNC	ENSMUSG00000043633.7	novel	3913	3	NA	NA	4712	-824	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1014	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTCTATTATTTTTAAAG	4780	False	NA	NA	False	NA	NA	NA	43664429	43663919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_43664024_43664104
ENSMUSG00000043633.7_43663920_43664429_2	chr4	-	399	2	NNC	ENSMUSG00000043633.7	novel	3913	3	NA	NA	4712	-824	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	754	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTCTATTATTTTTAAAG	4780	False	NA	NA	False	NA	NA	NA	43664429	43663919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_43663994_43664104
ENSMUSG00000043633.7_43663920_43664429_3	chr4	-	332	2	NNC	ENSMUSG00000043633.7	novel	3913	3	NA	NA	4712	-824	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTCTATTATTTTTAAAG	4780	False	NA	NA	False	NA	NA	NA	43664429	43663919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_43663985_43664162
ENSMUSG00000043633.7_43663920_43664429_4	chr4	-	447	2	NNC	ENSMUSG00000043633.7	novel	3913	3	NA	NA	4712	-824	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTCTATTATTTTTAAAG	4780	False	NA	NA	False	NA	NA	NA	43664429	43663919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_43664220_43664282
ENSMUSG00000043648.8_59675006_59678492_1	chr11	-	1495	2	FSM	ENSMUSG00000043648.8	ENSMUST00000125307.2	948	2	-24	-523	-21	-283	multi-exon	FALSE	canonical	3	85	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGTTTTCGCACTTT	NA	False	NA	NA	False	NA	NA	NA	59678492	59675005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_59676052_59678043
ENSMUSG00000043716.14_16171530_16174626_1	chr1	-	876	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2500.70481731318	16769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAATGTGTCGGA	NA	False	NA	-16	True	AATAAA	-14	NA	16174626	16171529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_16171584_16171950_16172161_16172713_16172808_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ENSMUSG00000043716.14_16171530_16174626_10	chr1	-	892	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2500.70481731318	22786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAATGTGTCGGA	NA	False	NA	-16	True	AATAAA	-14	NA	16174626	16171529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_16171584_16171950_16172161_16172713_16172804_16172895_16173054_16173391_16173559_16173733_16173909_16174588
ENSMUSG00000043716.14_16171530_16174626_11	chr1	-	876	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2415.49321510581	9196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAATGTGTCGGA	NA	False	NA	-16	True	AATAAA	-14	NA	16174626	16171529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173749_16173909_16174588
ENSMUSG00000043716.14_16171530_16174626_12	chr1	-	887	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2985.37158025969	10915	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAATGTGTCGGA	NA	False	NA	-16	True	AATAAA	-14	NA	16174626	16171529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_16171584_16171950_16172156_16172709_16172824_16172915_16173054_16173391_16173559_16173733_16173905_16174588
ENSMUSG00000043716.14_16171530_16174626_13	chr1	-	891	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	382	junction_2	2273.01926593976	51277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAATGTGTCGGA	NA	False	NA	-16	True	AATAAA	-14	NA	16174626	16171529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_16171584_16171950_16172156_16172709_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ENSMUSG00000043716.14_16171530_16174626_14	chr1	-	890	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2985.37158025969	26974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAATGTGTCGGA	NA	False	NA	-16	True	AATAAA	-14	NA	16174626	16171529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_16171584_16171950_16172156_16172709_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174589
ENSMUSG00000043716.14_16171530_16174626_2	chr1	-	903	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2500.70481731318	64702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAATGTGTCGGA	NA	False	NA	-16	True	AATAAA	-14	NA	16174626	16171529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172904_16173054_16173391_16173559_16173733_16173909_16174588
ENSMUSG00000043716.14_16171530_16174626_3	chr1	-	883	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2415.49321510581	30840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAATGTGTCGGA	NA	False	NA	-16	True	AATAAA	-14	NA	16174626	16171529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173550_16173733_16173909_16174588
ENSMUSG00000043716.14_16171530_16174626_4	chr1	-	880	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3159.78556322349	17009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAATGTGTCGGA	NA	False	NA	-16	True	AATAAA	-14	NA	16174626	16171529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173043_16173391_16173559_16173733_16173909_16174589
ENSMUSG00000043716.14_16171530_16174626_5	chr1	-	882	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3078.54708245446	17569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAATGTGTCGGA	NA	False	NA	-16	True	AATAAA	-14	NA	16174626	16171529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173550_16173733_16173909_16174589
ENSMUSG00000043716.14_16171530_16174626_6	chr1	-	885	7	NNC	ENSMUSG00000043716.14	novel	1597	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2482.96572782541	31234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAATGTGTCGGA	NA	False	NA	-16	True	AATAAA	-14	NA	16174626	16171529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173043_16173387_16173559_16173733_16173909_16174588
ENSMUSG00000043716.14_16171530_16174626_7	chr1	-	888	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2891.38454435472	15460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAATGTGTCGGA	NA	False	NA	-16	True	AATAAA	-14	NA	16174626	16171529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_16171584_16171950_16172156_16172709_16172824_16172918_16173054_16173391_16173559_16173733_16173909_16174588
ENSMUSG00000043716.14_16171530_16174626_8	chr1	-	883	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2535.91209210589	18248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAATGTGTCGGA	NA	False	NA	-16	True	AATAAA	-14	NA	16174626	16171529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173896_16174584
ENSMUSG00000043716.14_16171530_16174626_9	chr1	-	901	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2415.49321510581	46739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAATGTGTCGGA	NA	False	NA	-16	True	AATAAA	-14	NA	16174626	16171529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173568_16173733_16173909_16174588
ENSMUSG00000043770.11_43663920_43664429_1	chr4	+	483	2	Genic_Genomic	ENSMUSG00000043770.11	novel	297	1	NA	NA	-123	90	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGAGATGAAGGGGAGA	8381	False	NA	NA	False	ATTAAA	-33	NA	43663919	43664429	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_43664130_43664156
ENSMUSG00000043866.12_105385878_105392129_1	chr7	-	1803	13	Fusion	ENSMUSG00000030888.15_ENSMUSG00000043866.12	novel	3053	7	NA	NA	688	-1979	multi-exon	FALSE	non_canonical	0	0	junction_1	0	874	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCGCCCGCCGCCCGGCCC	7878	False	NA	NA	False	NA	NA	NA	105392129	105385877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr7_-_105386014_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUSG00000043872.15_126941386_126954931_1	chr4	-	3532	9	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	172.979586945975	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCCTAATGAAGTTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	126954931	126941385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126951193_126951387_126952585_126952825_126953302_126953453_126954788
ENSMUSG00000043895.7_20877253_20888024_1	chr9	-	2745	2	FSM	ENSMUSG00000043895.7	ENSMUST00000054197.7	6394	2	53	3596	-19	2292	multi-exon	FALSE	canonical	3	250	junction_1	0	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGCTGGTGGTTATGT	8147	False	NA	-6	True	AATAAA	-14	NA	20888024	20877252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20879867_20887893
ENSMUSG00000043923.9_44318995_44321491_1	chr9	-	471	5	NNC	ENSMUSG00000043923.9	novel	651	5	NA	NA	1036	2461	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCCCGGTGGCCCAAC	NA	False	NA	NA	False	NA	NA	NA	44321491	44318994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_44319055_44319284_44319381_44319982_44320161_44321261_44321350_44321442
ENSMUSG00000043923.9_44318995_44321491_2	chr9	-	477	5	NNC	ENSMUSG00000043923.9	novel	651	5	NA	NA	1036	2461	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCCCGGTGGCCCAAC	NA	False	NA	NA	False	NA	NA	NA	44321491	44318994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_44319055_44319284_44319381_44319982_44320167_44321261_44321350_44321442
ENSMUSG00000043923.9_44318995_44321491_3	chr9	-	471	5	NNC	ENSMUSG00000043923.9	novel	651	5	NA	NA	1036	2461	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCCCGGTGGCCCAAC	NA	False	NA	NA	False	NA	NA	NA	44321491	44318994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_44319055_44319284_44319361_44319979_44320167_44321250_44321350_44321442
ENSMUSG00000043923.9_44318995_44321491_4	chr9	-	581	4	NIC	ENSMUSG00000043923.9	novel	877	3	NA	NA	1036	2461	intron_retention	FALSE	non_canonical	0	0	junction_1	0	4023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCCCGGTGGCCCAAC	NA	False	NA	NA	False	NA	NA	NA	44321491	44318994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_44319055_44319284_44319381_44319982_44320167_44321250
ENSMUSG00000043923.9_44318995_44321491_5	chr9	-	475	5	NNC	ENSMUSG00000043923.9	novel	651	5	NA	NA	1036	2461	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	9404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCCCGGTGGCCCAAC	NA	False	NA	NA	False	NA	NA	NA	44321491	44318994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_44319055_44319284_44319381_44319995_44320167_44321250_44321350_44321442
ENSMUSG00000043923.9_44318995_44321491_6	chr9	-	497	5	NNC	ENSMUSG00000043923.9	novel	651	5	NA	NA	1036	2461	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	19256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCCCGGTGGCCCAAC	NA	False	NA	NA	False	NA	NA	NA	44321491	44318994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_44319055_44319284_44319381_44319982_44320176_44321250_44321350_44321442
ENSMUSG00000043923.9_44318995_44326172_1	chr9	-	493	6	NNC	ENSMUSG00000043923.9	novel	651	5	NA	NA	-1577	2461	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	70827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCCCGGTGGCCCAAC	NA	False	NA	NA	False	NA	NA	NA	44326172	44318994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442_44321482_44326157
ENSMUSG00000043923.9_44318995_44326172_2	chr9	-	526	6	NNC	ENSMUSG00000043923.9	novel	651	5	NA	NA	-1577	2461	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	129517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCCCGGTGGCCCAAC	NA	False	NA	NA	False	NA	NA	NA	44326172	44318994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442_44321497_44326139
ENSMUSG00000043962.17_126057875_126096481_1	chr4	-	4394	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	517	junction_11	115.160039556887	1013	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6746	False	NA	-3	True	AATAAA	-28	NA	126096481	126057874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ENSMUSG00000043962.17_126065508_126096428_1	chr4	-	2444	9	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-12	1128	combination_of_known_junctions	FALSE	canonical	3	517	junction_8	121.539088362551	381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGGATCAAAGAAGCAGA	6799	False	NA	-1	True	NA	NA	NA	126096428	126065507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ENSMUSG00000044018.4_49512596_49521093_1	chr4	-	2092	3	NNC	ENSMUSG00000044018.4	novel	2114	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	143	junction_1	569	2917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTTTAAAGTGTTATT	NA	False	NA	0	True	AATAAA	-21	NA	49521093	49512595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_49512737_49512758_49514578_49520961
ENSMUSG00000044018.4_49513966_49521093_1	chr4	-	740	2	NNC	ENSMUSG00000044018.4	novel	2114	2	NA	NA	0	-1370	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTTGTTATTCCAA	NA	False	NA	-6	True	AATAAA	-20	NA	49521093	49513965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_49514574_49520961
ENSMUSG00000044018.4_49513966_49521093_2	chr4	-	744	2	FSM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	0	1370	0	-1370	multi-exon	FALSE	canonical	3	1281	junction_1	0	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTTGTTATTCCAA	NA	False	NA	-6	True	AATAAA	-20	NA	49521093	49513965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_49514578_49520961
ENSMUSG00000044033.17_76879913_77000968_1	chr2	-	2047	12	ISM	ENSMUSG00000044033.17	ENSMUST00000164114.9	6222	24	-7	39574	-7	-4598	5prime_fragment	TRUE	canonical	3	25	junction_4	5.66269509178089	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGAAGCCAGCACCTT	NA	False	NA	-4	True	AATAAA	-15	NA	77000968	76879912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
ENSMUSG00000044066.15_20179228_20199418_1	chr11	-	2613	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	0	2191	0	-2191	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCGTGTTTAAAAACCAGC	3055	False	NA	-10	True	GATAAA	-18	NA	20199418	20179227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
ENSMUSG00000044068.8_22922005_22923418_1	chr11	+	1391	2	Genic_Genomic	ENSMUSG00000044068.8	novel	4492	1	NA	NA	0	-1096	multi-exon	FALSE	non_canonical	0	0	junction_1	0	154	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGATTACATGAAGAGT	NA	False	NA	NA	False	NA	NA	NA	22922004	22923418	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_22923177_22923199
ENSMUSG00000044068.8_22922005_22924908_1	chr11	+	2881	2	Genic_Genomic	ENSMUSG00000044068.8	novel	4492	1	NA	NA	0	394	multi-exon	FALSE	non_canonical	0	0	junction_1	0	328	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTGTCTGAATCTGT	NA	False	NA	10	True	AATATA	-16	NA	22922004	22924908	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_22923177_22923199
ENSMUSG00000044081.8_67895919_67903265_1	chr13	+	2230	4	Genic_Genomic	ENSMUSG00000044081.8	novel	1784	3	NA	NA	3596	-568	multi-exon	FALSE	non_canonical	0	0	junction_1	0	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCGGAAGCACAGAGAGCA	NA	False	NA	NA	False	AAAAAG	-2	NA	67895918	67903265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_67897842_67899728_67899825_67900506_67900634_67903181
ENSMUSG00000044117.13_13804521_13918859_2	chr16	+	1836	6	FSM	ENSMUSG00000044117.13	ENSMUST00000056521.12	2394	6	53	505	0	-505	multi-exon	FALSE	canonical	3	47	junction_1	4.9152822909778	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACATCTTATATGTTCT	NA	False	NA	4	True	AATAAA	-14	NA	13804520	13918859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13804758_13867246_13867371_13906809_13906884_13911752_13911868_13913767_13913851_13917656
ENSMUSG00000044117.13_13804521_13919155_1	chr16	+	2132	6	FSM	ENSMUSG00000044117.13	ENSMUST00000056521.12	2394	6	53	209	0	-209	multi-exon	FALSE	canonical	3	47	junction_1	4.9152822909778	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGCTTAGTACTCCATC	NA	False	NA	12	True	NA	NA	NA	13804520	13919155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13804758_13867246_13867371_13906809_13906884_13911752_13911868_13913767_13913851_13917656
ENSMUSG00000044145.3_127046531_127050177_1	chr2	-	323	2	FSM	ENSMUSG00000044145.3	ENSMUST00000150956.2	2364	2	-3	2044	-3	-2044	multi-exon	FALSE	canonical	3	36	junction_1	0	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTAGATCTTCTCTCGG	NA	False	NA	0	True	ATTAAA	-17	NA	127050177	127046530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_127046771_127050094
ENSMUSG00000044150.13_158315664_158376077_1	chrX	+	3392	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	151	junction_11	167.554634539172	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315663	158376077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ENSMUSG00000044150.13_158315715_158336817_1	chrX	+	1396	4	ISM	ENSMUSG00000044150.13	ENSMUST00000057180.13	2513	11	0	38573	0	1932	5prime_fragment	FALSE	canonical	3	487	junction_1	64.3238334954903	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGCTATTCACTTATC	NA	False	NA	96	True	AGTAAA	-29	NA	158315714	158336817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239
ENSMUSG00000044150.13_158315715_158344959_1	chrX	+	3950	8	ISM	ENSMUSG00000044150.13	ENSMUST00000057180.13	2513	11	0	30431	0	10074	5prime_fragment	FALSE	canonical	3	421	junction_5	81.1237402027902	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTGCAAGTTTTTG	NA	False	NA	11	True	NA	NA	NA	158315714	158344959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
ENSMUSG00000044150.13_158315715_158376077_1	chrX	+	3228	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_9	160.572169094159	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315714	158376077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158375066
ENSMUSG00000044150.13_158315715_158376077_2	chrX	+	3341	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_11	167.554634539172	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315714	158376077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ENSMUSG00000044155.12_18848640_18854052_1	chr6	+	740	4	NNC	ENSMUSG00000044155.12	novel	807	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	459.95096356991	6421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCTTTTCTTTCCT	-9	True	NA	17	True	AATAAA	-17	NA	18848639	18854052	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_18848763_18849624_18849666_18851634_18851763_18853604
ENSMUSG00000044155.12_18848667_18853898_1	chr6	+	564	4	FSM	ENSMUSG00000044155.12	ENSMUST00000056398.11	807	4	89	154	0	152	multi-exon	FALSE	canonical	3	968	junction_1	14.522013940528	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATACAAAAATCTAAGGAT	18	True	NA	NA	False	AATAAA	-31	NA	18848666	18853898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_18848763_18849624_18849666_18851634_18851763_18853599
ENSMUSG00000044201.11_34866050_34884580_1	chr18	-	2085	14	NIC	ENSMUSG00000044201.11	novel	2121	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	155	junction_13	20.7081723569914	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCTAGATGTCTCTA	2798	False	NA	-19	True	AATAAA	-18	NA	34884580	34866049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884265_34884366
ENSMUSG00000044201.11_34866050_34884580_2	chr18	-	1710	13	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_6	54.9051581264355	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCTAGATGTCTCTA	2798	False	NA	-19	True	AATAAA	-18	NA	34884580	34866049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ENSMUSG00000044224.17_10446852_10470408_1	chr15	-	1856	12	FSM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	194	10	194	0	multi-exon	FALSE	canonical	3	660	junction_1	60.8163473021321	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACATGTGCCTTTCTGCTT	159	False	NA	-25	True	ATTAAA	-13	NA	10470408	10446851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ENSMUSG00000044250.9_97275045_97283562_1	chr15	+	1779	2	NNC	ENSMUSG00000044250.9	novel	2185	6	NA	NA	15947	1	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	0	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCCAAAAGTGGTTCT	NA	False	NA	15	True	AATAAA	-16	NA	97275044	97283562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_97275170_97281908
ENSMUSG00000044252.19_12888385_12995297_1	chr18	-	2420	13	FSM	ENSMUSG00000044252.19	ENSMUST00000118313.8	2893	13	473	0	0	0	multi-exon	FALSE	canonical	3	43	junction_12	94.3352473304061	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12995297	12888384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12995163
ENSMUSG00000044252.19_12888385_12995297_2	chr18	-	2583	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	433	14	0	0	multi-exon	FALSE	canonical	3	56	junction_13	88.7068171466208	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12995297	12888384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
ENSMUSG00000044252.19_12889249_12995297_1	chr18	-	1719	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	433	878	0	0	multi-exon	FALSE	canonical	3	56	junction_13	88.7068171466208	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGTGTTTGCTAATCTAA	NA	False	NA	-11	True	ATTAAA	-13	NA	12995297	12889248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
ENSMUSG00000044279.16_57369283_57372918_2	chr17	+	1375	3	FSM	ENSMUSG00000044279.16	ENSMUST00000163763.2	868	3	-16	-491	0	0	multi-exon	FALSE	canonical	3	202	junction_2	10.5	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTAGCTGTAAGCTCTT	1578	False	NA	NA	False	AATAAA	-31	NA	57369282	57372918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_57369767_57370636_57370699_57372089
ENSMUSG00000044285.9_46321485_46322457_1	chr14	+	517	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1019	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	False	NA	NA	False	NA	NA	NA	46321484	46322457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_46321787_46322242
ENSMUSG00000044285.9_46321485_46322457_10	chr14	+	517	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	1664	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	False	NA	NA	False	NA	NA	NA	46321484	46322457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_46321631_46322086
ENSMUSG00000044285.9_46321485_46322457_11	chr14	+	746	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	2257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	False	NA	NA	False	NA	NA	NA	46321484	46322457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_46321604_46321830
ENSMUSG00000044285.9_46321485_46322457_12	chr14	+	517	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1206	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	False	NA	NA	False	NA	NA	NA	46321484	46322457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_46321748_46322203
ENSMUSG00000044285.9_46321485_46322457_13	chr14	+	259	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	805	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	False	NA	NA	False	NA	NA	NA	46321484	46322457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_46321569_46322282
ENSMUSG00000044285.9_46321485_46322457_2	chr14	+	748	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	2199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	False	NA	NA	False	NA	NA	NA	46321484	46322457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_46321658_46321882
ENSMUSG00000044285.9_46321485_46322457_3	chr14	+	253	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	780	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	False	NA	NA	False	NA	NA	NA	46321484	46322457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_46321569_46322288
ENSMUSG00000044285.9_46321485_46322457_4	chr14	+	745	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	2900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	False	NA	NA	False	NA	NA	NA	46321484	46322457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_46321631_46321858
ENSMUSG00000044285.9_46321485_46322457_5	chr14	+	242	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	648	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	False	NA	NA	False	NA	NA	NA	46321484	46322457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_46321555_46322285
ENSMUSG00000044285.9_46321485_46322457_7	chr14	+	745	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	3186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	False	NA	NA	False	NA	NA	NA	46321484	46322457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_46321787_46322014
ENSMUSG00000044285.9_46321485_46322457_8	chr14	+	448	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	False	NA	NA	False	NA	NA	NA	46321484	46322457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_46321625_46322149
ENSMUSG00000044285.9_46321917_46322457_1	chr14	+	312	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	332	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	548	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	False	NA	NA	False	NA	NA	NA	46321916	46322457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_46322002_46322230
ENSMUSG00000044337.6_90131728_90143446_1	chr1	+	2012	2	FSM	ENSMUSG00000044337.6	ENSMUST00000065587.5	3065	2	26	1027	0	-1027	multi-exon	FALSE	canonical	3	47	junction_1	0	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATGTGTGCTTTGGGTT	NA	False	NA	10	True	AATAAA	-18	NA	90131727	90143446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_90131810_90141516
ENSMUSG00000044339.13_114261987_114266279_1	chr5	-	1030	4	NIC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	238.844905511692	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	7978	False	NA	-2	True	AATAAA	-22	NA	114266279	114261986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_114262316_114263592_114263792_114265586_114265831_114266021
ENSMUSG00000044339.13_114261987_114268772_1	chr5	-	1028	4	NNC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	-2493	0	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_3	211.98480029369	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	5485	False	NA	-2	True	AATAAA	-22	NA	114268772	114261986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_114262316_114263592_114263792_114265586_114265831_114268516
ENSMUSG00000044348.15_135903531_135938757_1	chrX	-	1721	7	NNC	ENSMUSG00000044348.15	novel	1737	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.8394724940223	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGAGATTATCCCTAGTT	NA	False	NA	NA	False	NA	NA	NA	135938757	135903530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930857_135933099_135933250_135938678
ENSMUSG00000044349.17_158217635_158223510_1	chr2	+	1232	5	FSM	ENSMUSG00000044349.17	ENSMUST00000109488.8	5864	5	77	4555	0	0	multi-exon	FALSE	canonical	3	5	junction_4	1.92028643696715	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAAAATAAATAATT	NA	False	NA	NA	False	NA	NA	NA	158217634	158223510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_158217809_158218000_158218247_158218913_158218993_158222690_158222772_158222858
ENSMUSG00000044408.8_54692177_54703293_1	chr12	-	521	3	NNC	ENSMUSG00000044408.8	novel	1346	2	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.5	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTCTTTTATGGTTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	54703293	54692176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_54692217_54692976_54693321_54703156
ENSMUSG00000044424.5_23596691_23597732_1	chr19	+	666	2	Genic_Genomic	ENSMUSG00000044424.5	novel	571	1	NA	NA	-422	49	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGCTCAGAACTGAACAA	NA	False	NA	NA	False	AATAAA	-31	NA	23596690	23597732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr19_+_23596738_23597113
ENSMUSG00000044429.9_65139548_65142406_1	chr1	-	604	2	FSM	ENSMUSG00000044429.9	ENSMUST00000154012.2	717	2	113	0	113	0	multi-exon	FALSE	canonical	2	4	junction_1	0	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCTTGCTTATCTTCA	NA	False	NA	NA	False	AATAAA	-27	NA	65142406	65139547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_65139885_65142139
ENSMUSG00000044442.12_87151115_87158812_1	chr16	+	480	4	NNC	ENSMUSG00000044442.12	novel	1700	5	NA	NA	0	-3746	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	53.2749680640188	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTTCTTGGTGTTTTCT	NA	False	NA	NA	False	AAAACA	-31	NA	87151114	87158812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_87151275_87153065_87153153_87153785_87153877_87158670
ENSMUSG00000044442.12_87151115_87164573_1	chr16	+	785	6	FSM	ENSMUSG00000044442.12	ENSMUST00000054442.11	1884	6	42	1057	0	0	multi-exon	FALSE	canonical	3	84	junction_5	18.2931681236466	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTGG	NA	False	NA	NA	False	AAGAAA	-23	NA	87151114	87164573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87163026_87163169_87164352
ENSMUSG00000044442.12_87151115_87165400_1	chr16	+	1612	6	FSM	ENSMUSG00000044442.12	ENSMUST00000054442.11	1884	6	42	230	0	-230	multi-exon	FALSE	canonical	3	84	junction_5	18.2931681236466	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTGAATCCATTCCAC	NA	False	NA	NA	False	AATAAA	-2	NA	87151114	87165400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87163026_87163169_87164352
ENSMUSG00000044452.11_35493908_35502428_1	chr7	-	1397	3	ISM	ENSMUSG00000044452.11	ENSMUST00000205670.2	608	4	-17	2761	0	-2761	5prime_fragment	FALSE	canonical	3	57	junction_1	1.5	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGTCACGTGAATGT	NA	False	NA	NA	False	NA	NA	NA	35502428	35493907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_35495044_35500862_35500954_35502258
ENSMUSG00000044475.15_59838661_59935808_1	chr10	+	1352	10	NIC	ENSMUSG00000044475.15	novel	1450	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	69.3265666213622	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	26	True	AATAAA	-16	NA	59838660	59935808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_59838730_59840616_59840750_59843548_59843649_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
ENSMUSG00000044475.15_59838661_59935808_2	chr10	+	1442	11	NNC	ENSMUSG00000044475.15	novel	1450	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_10	70.1604589494681	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	26	True	AATAAA	-16	NA	59838660	59935808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935535
ENSMUSG00000044475.15_59838661_59935808_3	chr10	+	1444	11	NNC	ENSMUSG00000044475.15	novel	1450	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	71.820957944043	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	26	True	AATAAA	-16	NA	59838660	59935808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900150_59900231_59933914_59934037_59935527
ENSMUSG00000044475.15_59839053_59935808_1	chr10	+	1456	11	NNC	ENSMUSG00000044475.15	novel	1230	6	NA	NA	-96	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	72.3599336649779	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	26	True	AATAAA	-16	NA	59839052	59935808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_59839128_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
ENSMUSG00000044477.13_30224215_30427393_1	chr17	+	928	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	508	1603	0	0	multi-exon	FALSE	canonical	3	90	junction_1	13.1301180497359	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCTAGTGGATTTACA	NA	False	NA	22	True	ATTAAA	-23	NA	30224214	30427393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
ENSMUSG00000044496.7_148029813_148031771_1	chr4	+	820	2	ISM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	4461	0	4461	0	3prime_fragment	FALSE	canonical	3	528	junction_1	0	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTGGTCTGTGTGTGG	NA	False	NA	21	True	AATAAA	-16	NA	148029812	148031771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_148029919_148031057
ENSMUSG00000044501.18_22580436_22595526_1	chr17	+	2191	4	FSM	ENSMUSG00000044501.18	ENSMUST00000121315.2	2860	4	-67	736	0	289	multi-exon	FALSE	canonical	3	6	junction_1	15.7973274814304	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAGTATCTGAAAATT	NA	False	NA	NA	False	NA	NA	NA	22580435	22595526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_22580689_22591016_22591070_22592623_22592751_22593768
ENSMUSG00000044502.17_31615181_31621727_1	chr11	-	1236	4	FSM	ENSMUSG00000044502.17	ENSMUST00000058060.14	1394	4	158	0	0	0	multi-exon	FALSE	canonical	3	568	junction_1	23.4141457717813	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGACGATCTTTCCC	NA	False	NA	-29	True	AATAAA	-22	NA	31621727	31615180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_31615868_31616736_31616934_31619243_31619369_31621500
ENSMUSG00000044562.13_45281980_45288517_1	chr7	+	1614	8	ISM	ENSMUSG00000044562.13	ENSMUST00000057927.10	3202	12	5068	0	5068	0	3prime_fragment	FALSE	canonical	3	61	junction_1	11.5245965886278	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTTGTCAAGATTTGGG	4434	False	NA	6	True	AATAAA	-19	NA	45281979	45288517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45285761_45286006_45286143_45286317_45287293_45287442_45288108
ENSMUSG00000044562.13_45285769_45288517_1	chr7	+	819	3	NIC	ENSMUSG00000044562.13	novel	3202	12	NA	NA	8857	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	49	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTTGTCAAGATTTGGG	3281	False	NA	6	True	AATAAA	-19	NA	45285768	45288517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_45286006_45286143_45286317_45288108
ENSMUSG00000044573.17_30944966_30961570_1	chr12	-	1419	6	NNC	ENSMUSG00000044573.17	novel	3066	6	NA	NA	0	909	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	544.156007042098	4627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGTCTGCCTGCTTCT	NA	False	NA	NA	False	AATACA	-14	NA	30961570	30944965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961494
ENSMUSG00000044573.17_30944966_30961570_2	chr12	-	1425	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	18	1311	0	909	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	5108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGTCTGCCTGCTTCT	NA	False	NA	NA	False	AATACA	-14	NA	30961570	30944965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
ENSMUSG00000044573.17_30945135_30961570_1	chr12	-	1256	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	18	1480	0	740	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTATGTGTTTGTAAG	NA	False	NA	NA	False	AAAAAG	-15	NA	30961570	30945134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
ENSMUSG00000044573.17_30945698_30961570_1	chr12	-	693	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	18	2043	0	177	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAGGTGTGGCTAAGCA	NA	False	NA	NA	False	GATAAA	-18	NA	30961570	30945697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
ENSMUSG00000044573.17_30945698_30961570_2	chr12	-	693	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	0	2373	0	177	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAGGTGTGGCTAAGCA	NA	False	NA	NA	False	GATAAA	-18	NA	30961570	30945697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
ENSMUSG00000044595.11_36893273_36896863_1	chr18	-	1629	7	NIC	ENSMUSG00000044595.11	novel	1451	4	NA	NA	2388	3451	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCGGGATCGGAAGTGCA	NA	False	NA	NA	False	NA	NA	NA	36896863	36893272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895821_36895901_36896072_36896144
ENSMUSG00000044595.11_36893273_36896863_2	chr18	-	1613	7	NNC	ENSMUSG00000044595.11	novel	1451	4	NA	NA	2388	3451	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCGGGATCGGAAGTGCA	NA	False	NA	NA	False	NA	NA	NA	36896863	36893272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_36893528_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895811_36895901_36896072_36896144
ENSMUSG00000044600.15_73319766_73324906_1	chr8	-	2132	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	26	734	0	-734	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	1567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACTGTGTGTGTGAAAAA	NA	False	NA	-39	True	GATAAA	-15	NA	73324906	73319765	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
ENSMUSG00000044600.15_73320789_73324906_1	chr8	-	1109	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	26	1757	0	542	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	1245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTATTGTTGCTTGTG	NA	False	NA	-7	True	AATAAA	-16	NA	73324906	73320788	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
ENSMUSG00000044600.15_73321331_73324906_1	chr8	-	567	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	26	2299	0	0	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGGTGTCTTTGTCTGT	NA	False	NA	-6	True	NA	NA	NA	73324906	73321330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
ENSMUSG00000044626.14_21773658_21814263_1	chr16	-	2682	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	150	1091	0	479	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCTGTTAGAGGAATTAA	NA	False	NA	-24	True	AATACA	-16	NA	21814263	21773657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ENSMUSG00000044626.14_21773731_21814201_1	chr16	-	2547	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	212	1164	0	406	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGCAATCCATACTTAT	NA	False	NA	-7	True	AATGAA	-19	NA	21814201	21773730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ENSMUSG00000044626.14_21774334_21814263_1	chr16	-	2006	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	150	1767	0	0	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGGTTTGGCTCTTACGT	NA	False	NA	NA	False	NA	NA	NA	21814263	21774333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ENSMUSG00000044627.12_32168828_32178022_1	chr2	-	698	4	NNC	ENSMUSG00000044627.12	novel	768	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1628.30675515668	4030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178022	32168827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_32169144_32170720_32170816_32171697_32171856_32177893
ENSMUSG00000044627.12_32168828_32178022_3	chr2	-	707	5	NNC	ENSMUSG00000044627.12	novel	768	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1492.44472259444	14310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178022	32168827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177651_32177893
ENSMUSG00000044627.12_32168828_32178022_4	chr2	-	686	4	NNC	ENSMUSG00000044627.12	novel	768	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1628.30675515668	2792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178022	32168827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_32169144_32170720_32170816_32171697_32171823_32177872
ENSMUSG00000044627.12_32168828_32178022_5	chr2	-	698	5	NNC	ENSMUSG00000044627.12	novel	768	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1498.56506365256	13410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178022	32168827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_32169144_32170720_32170816_32171709_32171823_32177608_32177658_32177897
ENSMUSG00000044627.12_32168828_32178084_1	chr2	-	627	5	FSM	ENSMUSG00000044627.12	ENSMUST00000113400.3	522	5	-3	-102	-3	0	multi-exon	FALSE	canonical	3	43	junction_4	1473.86522026269	1569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178084	32168827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32178042
ENSMUSG00000044627.12_32168930_32178022_1	chr2	-	605	5	NNC	ENSMUSG00000044627.12	novel	522	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1492.44472259444	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATTGGGAGGGGTGGGT	NA	False	NA	-114	True	NA	NA	NA	32178022	32168929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177651_32177893
ENSMUSG00000044627.12_32168930_32178022_3	chr2	-	608	5	FSM	ENSMUSG00000044627.12	ENSMUST00000183946.8	768	5	58	102	-5	0	multi-exon	FALSE	canonical	3	3309	junction_1	124.51380445557	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATTGGGAGGGGTGGGT	NA	False	NA	-114	True	NA	NA	NA	32178022	32168929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32177897
ENSMUSG00000044627.12_32177282_32178043_1	chr2	-	424	3	NNC	ENSMUSG00000044627.12	novel	4511	2	NA	NA	0	-3989	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	1804	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCTTCTTTTTAGTAATT	NA	False	NA	-1	True	TTTAAA	-17	NA	32178043	32177281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_32177511_32177608_32177658_32177897
ENSMUSG00000044676.11_110806378_110816851_1	chr8	+	2407	5	FSM	ENSMUSG00000044676.11	ENSMUST00000058804.10	3180	5	-18	791	0	-791	multi-exon	FALSE	canonical	1	4	junction_2	8.66025403784439	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCACCAACCAAACAAACAA	935	False	NA	NA	False	ACTAAA	-19	NA	110806377	110816851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_110806637_110809309_110809375_110810238_110810416_110810975_110811084_110815053
ENSMUSG00000044681.20_28405817_28414920_1	chr5	-	3514	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	100	-1630	100	0	multi-exon	FALSE	canonical	3	175	junction_1	2	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCAGTGTGGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-27	NA	28414920	28405816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_28408435_28412284_28412382_28414121
ENSMUSG00000044681.20_28407447_28414855_1	chr5	-	1819	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	165	0	165	0	multi-exon	FALSE	canonical	3	175	junction_1	2	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAAACTTGCATGAAT	NA	False	NA	-6	True	ATTAAA	-17	NA	28414855	28407446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_28408435_28412284_28412382_28414121
ENSMUSG00000044681.20_28407779_28414855_1	chr5	-	1487	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	165	332	165	-332	multi-exon	FALSE	canonical	3	175	junction_1	2	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATAGTGGGTTTCAAAA	NA	False	NA	NA	False	NA	NA	NA	28414855	28407778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_28408435_28412284_28412382_28414121
ENSMUSG00000044702.14_121706490_121732169_1	chr7	-	1679	11	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_8	41.0980534818865	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGCTTGGCTTGTTCT	NA	False	NA	-5	True	AATAAA	-15	NA	121732169	121706489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121728145_121728240_121728896_121728957_121731942
ENSMUSG00000044702.14_121706490_121732169_2	chr7	-	1985	12	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_8	40.7258522479556	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGCTTGGCTTGTTCT	NA	False	NA	-5	True	AATAAA	-15	NA	121732169	121706489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121727360_121727667_121728145_121728240_121728896_121728957_121731942
ENSMUSG00000044702.14_121726880_121732169_1	chr7	-	1168	4	FSM	ENSMUSG00000044702.14	ENSMUST00000130149.3	3216	4	-27	2075	0	-2075	multi-exon	FALSE	canonical	3	129	junction_1	6.34209919681348	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTAAAATCTCCCAGTA	NA	False	NA	NA	False	NA	NA	NA	121732169	121726879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_121727667_121728145_121728240_121728896_121728957_121731942
ENSMUSG00000044709.7_19298689_19307748_1	chr7	-	917	3	NNC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	0	182	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7.5	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTCTGGCTTTCCTTT	2464	False	NA	NA	False	AAGAAA	-17	NA	19307748	19298688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_19298802_19298849_19299598_19307692
ENSMUSG00000044709.7_19298689_19307748_2	chr7	-	915	3	NNC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	0	182	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27	1033	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTCTGGCTTTCCTTT	2464	False	NA	NA	False	AAGAAA	-17	NA	19307748	19298688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_19298790_19298843_19299602_19307692
ENSMUSG00000044709.7_19298689_19307748_3	chr7	-	921	3	NNC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	0	182	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27	1035	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTCTGGCTTTCCTTT	2464	False	NA	NA	False	AAGAAA	-17	NA	19307748	19298688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_19298802_19298849_19299602_19307692
ENSMUSG00000044709.7_19298871_19306893_1	chr7	-	793	2	FSM	ENSMUSG00000044709.7	ENSMUST00000122127.2	652	2	0	-141	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTGTGTGTG	3319	False	NA	-6	True	AATAAA	-22	NA	19306893	19298870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_19299602_19306831
ENSMUSG00000044709.7_19298871_19307014_1	chr7	-	914	2	FSM	ENSMUSG00000044709.7	ENSMUST00000122127.2	652	2	-121	-141	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTGTGTGTG	3198	False	NA	-6	True	AATAAA	-22	NA	19307014	19298870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_19299602_19306831
ENSMUSG00000044730.18_124830851_124838448_1	chr4	+	2838	6	NIC	ENSMUSG00000044730.18	novel	2911	5	NA	NA	0	0	intron_retention	FALSE	non_canonical	3	26	junction_1	9.3936148526539	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGACATTTGGTAAATAT	NA	False	NA	4	True	AATAAA	-18	NA	124830850	124838448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_124830884_124830971_124831127_124832232_124832511_124834158_124834339_124836145_124836265_124836375
ENSMUSG00000044763.9_55854081_55858182_1	chr16	-	1893	2	FSM	ENSMUSG00000044763.9	ENSMUST00000059052.9	3002	2	0	1109	0	-1109	multi-exon	FALSE	canonical	3	404	junction_1	0	1116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGATTCTTTGAATATCAGA	7386	False	NA	-3	True	AATAAA	-23	NA	55858182	55854080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_55855655_55857863
ENSMUSG00000044783.17_88190835_88205251_1	chr1	-	4132	8	FSM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	104	642	-23	-642	multi-exon	FALSE	canonical	3	259	junction_7	57.9852197916479	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGTCGGTCTGCCCTGC	8695	False	NA	-19	True	AATAAA	-19	NA	88205251	88190834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ENSMUSG00000044783.17_88192228_88205328_1	chr1	-	2816	8	FSM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	27	2035	27	322	multi-exon	FALSE	canonical	3	259	junction_7	57.9852197916479	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCTGGTTGAACTGGGT	8618	False	NA	NA	False	GATAAA	-19	NA	88205328	88192227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ENSMUSG00000044786.7_28076209_28078680_1	chr7	-	1792	2	FSM	ENSMUSG00000044786.7	ENSMUST00000051241.7	2790	2	998	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAAATTTGTCTTTTTC	6671	False	NA	-2	True	AATAAA	-18	NA	28078680	28076208	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28077919_28078598
ENSMUSG00000044788.11_115174192_115188388_1	chr11	-	1255	6	FSM	ENSMUSG00000044788.11	ENSMUST00000056153.8	4951	6	-48	3744	-48	-3744	multi-exon	FALSE	canonical	2	4	junction_5	1.6	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTGCATCCTGATCC	381	False	NA	NA	False	AAGAAA	-14	NA	115188388	115174191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115174482_115175025_115175206_115176124_115176313_115176943_115177125_115187363_115187531_115188139
ENSMUSG00000044816.11_65144444_65149389_1	chr1	-	838	4	NNC	ENSMUSG00000044816.11	novel	1156	8	NA	NA	12884	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_3	4.02768199119819	139	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGGATGTCAGCTCTT	10003	False	NA	NA	False	AATAAA	-11	NA	65149389	65144443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_65144910_65148620_65148736_65149035_65149124_65149220
ENSMUSG00000044820.7_54858099_54865314_1	chr9	-	1135	9	Genic_Genomic	ENSMUSG00000044820.7	novel	769	1	NA	NA	-7032	-585	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7737	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCCCGCGCGTGCGCAGG	NA	False	NA	NA	False	NA	NA	NA	54865314	54858098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_-_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863667_54864094_54864219_54864918
ENSMUSG00000044820.7_54858099_54865314_2	chr9	-	1134	8	Genic_Genomic	ENSMUSG00000044820.7	novel	769	1	NA	NA	-7032	-585	multi-exon	FALSE	non_canonical	0	0	junction_1	0	532	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCCCGCGCGTGCGCAGG	NA	False	NA	NA	False	NA	NA	NA	54865314	54858098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_-_54858188_54859598_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863667_54864094_54864219_54864918
ENSMUSG00000044820.7_54858099_54865314_3	chr9	-	1132	9	Genic_Genomic	ENSMUSG00000044820.7	novel	769	1	NA	NA	-7032	-585	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7894	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCCCGCGCGTGCGCAGG	NA	False	NA	NA	False	NA	NA	NA	54865314	54858098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_-_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862246_54863540_54863672_54864094_54864219_54864918
ENSMUSG00000044820.7_54858099_54865314_4	chr9	-	615	5	Genic_Genomic	ENSMUSG00000044820.7	novel	769	1	NA	NA	-7032	-585	multi-exon	TRUE	non_canonical	0	0	junction_1	0	362	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCCCGCGCGTGCGCAGG	NA	False	NA	NA	False	NA	NA	NA	54865314	54858098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_-_54858188_54859365_54859393_54859624_54859668_54859962_54860071_54864966
ENSMUSG00000044820.7_54858099_54865314_5	chr9	-	1113	8	Genic_Genomic	ENSMUSG00000044820.7	novel	769	1	NA	NA	-7032	-585	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1022	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCCCGCGCGTGCGCAGG	NA	False	NA	NA	False	NA	NA	NA	54865314	54858098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_-_54858188_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ENSMUSG00000044820.7_54858099_54865314_6	chr9	-	1140	9	Genic_Genomic	ENSMUSG00000044820.7	novel	769	1	NA	NA	-7032	-585	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8813	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCCCGCGCGTGCGCAGG	NA	False	NA	NA	False	NA	NA	NA	54865314	54858098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_-_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ENSMUSG00000044835.16_160970261_160979033_1	chr1	+	527	2	ISM	ENSMUSG00000044835.16	ENSMUST00000125018.8	673	5	0	11832	0	-11832	5prime_fragment	FALSE	canonical	0	0	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCATCAAGGTCAAACTT	NA	False	NA	NA	False	ATTAAA	-14	NA	160970260	160979033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_160970289_160978534
ENSMUSG00000044835.16_160970310_160995409_1	chr1	+	1027	7	FSM	ENSMUSG00000044835.16	ENSMUST00000111608.8	3714	7	28	2659	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.5547308932143	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCGTTCCTGCCAAGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	160970309	160995409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281
ENSMUSG00000044835.16_160988094_160995409_1	chr1	+	548	4	ISM	ENSMUSG00000044835.16	ENSMUST00000192384.6	523	5	17801	0	17757	0	3prime_fragment	FALSE	canonical	3	77	junction_2	12.657891697365	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCGTTCCTGCCAAGTT	593	False	NA	NA	False	ATTAAA	-14	NA	160988093	160995409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_160988332_160990836_160990976_160991741_160991785_160995281
ENSMUSG00000044881.8_100186307_100189002_1	chr7	+	890	2	FSM	ENSMUSG00000044881.8	ENSMUST00000120454.3	742	2	-132	-16	0	16	multi-exon	FALSE	canonical	2	17	junction_1	0	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGTTTCCGCAGTGACAT	7571	False	NA	12	True	AATAAA	-21	NA	100186306	100189002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_100186473_100188278
ENSMUSG00000044881.8_100186307_100189002_2	chr7	+	817	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	0	574	0	16	multi-exon	FALSE	canonical	3	255	junction_1	0	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGTTTCCGCAGTGACAT	7571	False	NA	12	True	AATAAA	-21	NA	100186306	100189002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_100186400_100188278
ENSMUSG00000044894.15_53319780_53321654_1	chr11	-	490	2	FSM	ENSMUSG00000044894.15	ENSMUST00000061326.5	1521	2	0	1031	0	0	multi-exon	FALSE	canonical	3	5710	junction_1	0	23378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	2947	False	NA	-8	True	AATAAA	-17	NA	53321654	53319779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_53319978_53321362
ENSMUSG00000044906.7_70585284_70605551_1	chr18	-	3218	9	FSM	ENSMUSG00000044906.7	ENSMUST00000067556.4	2291	9	0	-927	0	0	multi-exon	FALSE	canonical	3	72	junction_5	54.5590276672889	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70605551	70585283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
ENSMUSG00000044906.7_70601274_70605551_1	chr18	-	1141	4	FSM	ENSMUSG00000044906.7	ENSMUST00000237800.2	4393	4	24	3228	0	-3228	multi-exon	FALSE	canonical	3	180	junction_3	21.483844059096	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCTATTAACAGAGAAAAT	NA	False	NA	NA	False	TATAAA	-33	NA	70605551	70601273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_70601589_70602519_70602849_70604743_70605051_70605361
ENSMUSG00000044968.17_21869938_21878343_1	chr5	-	642	3	NNC	ENSMUSG00000044968.17	novel	3954	5	NA	NA	28049	-2037	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	64	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAAAGTTCCATTTCTTT	NA	False	NA	NA	False	AGTAAA	-25	NA	21878343	21869937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_21870361_21875486_21875602_21878239
ENSMUSG00000044968.17_21869938_21881004_1	chr5	-	1090	3	ISM	ENSMUSG00000044968.17	ENSMUST00000115217.8	3954	5	25388	2039	25388	-2037	3prime_fragment	FALSE	canonical	3	114	junction_2	10.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAAAGTTCCATTTCTTT	NA	False	NA	NA	False	AGTAAA	-25	NA	21881004	21869937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_21870361_21875486_21875602_21880452
ENSMUSG00000044968.17_21869938_21888906_1	chr5	-	1938	4	ISM	ENSMUSG00000044968.17	ENSMUST00000115217.8	3954	5	17486	2039	17486	-2037	3prime_fragment	FALSE	canonical	3	67	junction_3	28.4292494136272	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAAAGTTCCATTTCTTT	NA	False	NA	NA	False	AGTAAA	-25	NA	21888906	21869937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153
ENSMUSG00000044986.11_78283756_78290612_1	chr15	-	1649	2	FSM	ENSMUSG00000044986.11	ENSMUST00000058659.9	1144	2	-505	0	-505	0	multi-exon	FALSE	canonical	3	371	junction_1	0	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTGCCTCCTTGCCC	7579	False	NA	-3	True	AATAAA	-17	NA	78290612	78283755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_78284231_78289438
ENSMUSG00000044991.11_132533869_132592975_1	chr2	+	1176	3	NNC	ENSMUSG00000044991.11	novel	1076	3	NA	NA	1666	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	2.5	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACTCAGTCTATTTC	NA	False	NA	27	True	NA	NA	NA	132533868	132592975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_132534052_132572619_132572770_132592132
ENSMUSG00000045010.15_100833954_100838041_1	chrX	-	2253	6	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-12	0	intron_retention	FALSE	canonical	3	117	junction_2	83.8035798758024	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838041	100833953	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_100834130_100834212_100834505_100834844_100834891_100835166_100835250_100835786_100835944_100836542
ENSMUSG00000045010.15_100833954_100838041_2	chrX	-	2593	5	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-12	0	intron_retention	FALSE	canonical	3	142	junction_4	69.9052930757035	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838041	100833953	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_100834130_100834212_100834891_100835166_100835250_100835786_100835944_100836542
ENSMUSG00000045078.13_142978404_143098735_1	chr5	-	2704	17	FSM	ENSMUSG00000045078.13	ENSMUST00000053498.13	4474	17	14	1756	0	0	multi-exon	FALSE	canonical	3	121	junction_14	28.015550927119	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAAAGCCCTGTCAGCC	6144	False	NA	NA	False	NA	NA	NA	143098735	142978403	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084261_143098653
ENSMUSG00000045098.20_3818134_3855463_1	chr19	+	1673	9	FSM	ENSMUSG00000045098.20	ENSMUST00000005518.16	1283	9	16	-406	0	0	multi-exon	FALSE	canonical	3	249	junction_4	20.1242235875077	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTAGAATTGACCAAA	NA	False	NA	4	True	AATAAA	-14	NA	3818133	3855463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916
ENSMUSG00000045102.13_34306661_34326794_1	chr5	-	357	3	NNC	ENSMUSG00000079555.3	novel	2073	5	NA	NA	-2	4563	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0.5	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATCAGAGAAGAATGGCT	9403	False	NA	NA	False	TATAAA	-6	NA	34326794	34306660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_34306812_34307060_34307206_34326733
ENSMUSG00000045103.20_84091925_84248058_1	chrX	+	3891	18	NNC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	0	-587	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	83.1706046687702	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGATAACAAATTGAAATT	NA	False	NA	NA	False	AAGAAA	-12	NA	84091924	84248058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076_84246547_84246568
ENSMUSG00000045103.20_84091925_84248058_2	chrX	+	3913	17	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	0	-587	combination_of_known_junctions	FALSE	canonical	3	247	junction_13	44.1996535619907	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGATAACAAATTGAAATT	NA	False	NA	NA	False	AAGAAA	-12	NA	84091924	84248058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ENSMUSG00000045106.13_104830001_104847176_1	chr2	+	1304	11	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	7466	-1020	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCTCGGCCGCGCACGC	8631	False	NA	NA	False	NA	NA	NA	104830000	104847176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847020
ENSMUSG00000045106.13_104830001_104847388_1	chr2	+	1241	11	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	7466	-808	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCGGTGCCGTACAGGGT	8631	False	NA	NA	False	NA	NA	NA	104830000	104847388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104830187_104830591_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000045106.13_104830001_104847388_2	chr2	+	1243	11	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	7466	-808	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCGGTGCCGTACAGGGT	8631	False	NA	NA	False	NA	NA	NA	104830000	104847388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843282_104843536_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000045106.13_104830001_104847388_3	chr2	+	1246	11	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	7466	-808	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	9323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCGGTGCCGTACAGGGT	8631	False	NA	NA	False	NA	NA	NA	104830000	104847388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000045106.13_104830001_104847388_4	chr2	+	1237	11	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	7466	-808	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCGGTGCCGTACAGGGT	8631	False	NA	NA	False	NA	NA	NA	104830000	104847388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836204_104837087_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000045106.13_104830001_104847388_5	chr2	+	1236	11	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	7466	-808	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCGGTGCCGTACAGGGT	8631	False	NA	NA	False	NA	NA	NA	104830000	104847388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844219_104845114_104845248_104847290
ENSMUSG00000045106.13_104830001_104847388_6	chr2	+	1236	11	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	7466	-808	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCGGTGCCGTACAGGGT	8631	False	NA	NA	False	NA	NA	NA	104830000	104847388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104830187_104830586_104830648_104831625_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000045106.13_104830001_104847388_7	chr2	+	1239	11	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	7466	-808	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCGGTGCCGTACAGGGT	8631	False	NA	NA	False	NA	NA	NA	104830000	104847388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104830187_104830586_104830641_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000045106.13_104830001_104847388_8	chr2	+	1102	10	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	7466	-808	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCGGTGCCGTACAGGGT	8631	False	NA	NA	False	NA	NA	NA	104830000	104847388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_104830187_104830586_104830648_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000045106.13_104830001_104847388_9	chr2	+	1245	11	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	7466	-808	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCGGTGCCGTACAGGGT	8631	False	NA	NA	False	NA	NA	NA	104830000	104847388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836204_104837079_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000045106.13_104830001_104847425_1	chr2	+	1273	11	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	7466	-771	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCAGCCACAGAGGGCGG	8631	False	NA	NA	False	NA	NA	NA	104830000	104847425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843205_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000045106.13_104830001_104847425_2	chr2	+	1273	11	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	7466	-771	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCAGCCACAGAGGGCGG	8631	False	NA	NA	False	NA	NA	NA	104830000	104847425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104830187_104830586_104830648_104831615_104831746_104835265_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000045107.6_20127192_20133251_1	chr14	-	827	2	FSM	ENSMUSG00000045107.6	ENSMUST00000059666.6	2315	2	0	1488	0	336	multi-exon	FALSE	canonical	3	53	junction_1	0	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTGGTTTGTCTCATT	5305	False	NA	NA	False	TATAAA	-14	NA	20133251	20127191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_20127713_20132945
ENSMUSG00000045128.10_71348023_71350056_1	chr8	-	603	5	FSM	ENSMUSG00000045128.10	ENSMUST00000054220.10	1260	5	0	657	0	0	multi-exon	FALSE	canonical	3	16397	junction_4	7934.97659101777	147594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350056	71348022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71350002
ENSMUSG00000045128.10_71348023_71350056_2	chr8	-	598	5	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	12201.6034064175	138355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350056	71348022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_71348152_71348243_71348354_71348564_71348690_71348776_71348957_71350002
ENSMUSG00000045136.7_34310992_34314337_1	chr13	-	1921	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	0	261	0	-261	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	8045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGTACACGACTTGT	NA	False	NA	-14	True	AAGAAA	-18	NA	34314337	34310991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
ENSMUSG00000045136.7_34311204_34314337_1	chr13	-	1709	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	0	473	0	-473	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	7912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGTCCTCTTTTCTTTCT	NA	False	NA	0	True	CATAAA	-15	NA	34314337	34311203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
ENSMUSG00000045136.7_34311204_34314337_2	chr13	-	994	5	NNC	ENSMUSG00000045136.7	novel	2182	4	NA	NA	0	-473	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	208.621667139346	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGTCCTCTTTTCTTTCT	NA	False	NA	0	True	CATAAA	-15	NA	34314337	34311203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_34311589_34312303_34312515_34312854_34312966_34313228_34313338_34314159
ENSMUSG00000045136.7_34311204_34314467_1	chr13	-	1839	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	-130	473	-18	-473	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	7915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGTCCTCTTTTCTTTCT	NA	False	NA	0	True	CATAAA	-15	NA	34314467	34311203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
ENSMUSG00000045160.15_83326473_83335378_1	chr6	+	527	4	FSM	ENSMUSG00000045160.15	ENSMUST00000136501.2	2312	4	45	1740	0	0	multi-exon	FALSE	canonical	3	755	junction_1	124.478467571259	316	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTGCCATGCTTCAGG	394	False	NA	26	True	ATTAAA	-26	NA	83326472	83335378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83326537_83328247_83328372_83330023_83330113_83335128
ENSMUSG00000045193.14_80008248_80008620_1	chr10	+	249	2	FSM	ENSMUSG00000045193.14	ENSMUST00000147190.2	593	2	432	-88	432	0	multi-exon	FALSE	canonical	3	60	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGACTCTGTGGCTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	80008247	80008620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80008347_80008470
ENSMUSG00000045232.5_84769289_84771629_1	chr8	-	903	2	FSM	ENSMUSG00000045232.5	ENSMUST00000061923.5	634	2	0	-269	0	269	multi-exon	FALSE	canonical	3	87	junction_1	0	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACGCGTGCGTATCAT	2848	False	NA	-2	True	AATAAA	-17	NA	84771629	84769288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84769961_84771398
ENSMUSG00000045237.6_69429483_69433023_1	chrX	+	1088	3	NNC	ENSMUSG00000045237.6	novel	1094	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	173	1241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTCTAGCTCCCT	NA	False	NA	14	True	AATAAA	-21	NA	69429482	69433023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_69429758_69431505_69431773_69432477
ENSMUSG00000045251.14_127018139_127021199_1	chr7	-	1168	3	NNC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6925	False	NA	-4	True	ATTAAA	-17	NA	127021199	127018138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_127018814_127020576_127020691_127020820
ENSMUSG00000045251.14_127018139_127021199_2	chr7	-	1194	3	NIC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	12.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6925	False	NA	-4	True	ATTAAA	-17	NA	127021199	127018138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_127018814_127020576_127020691_127020794
ENSMUSG00000045251.14_127018139_127021199_3	chr7	-	990	3	NIC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	25.5	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6925	False	NA	-4	True	ATTAAA	-17	NA	127021199	127018138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_127018814_127019181_127019278_127020980
ENSMUSG00000045251.14_127018139_127021199_4	chr7	-	894	2	FSM	ENSMUSG00000045251.14	ENSMUST00000126756.2	338	2	-177	-379	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6925	False	NA	-4	True	ATTAAA	-17	NA	127021199	127018138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127018814_127020980
ENSMUSG00000045273.9_100896182_100912321_1	chr13	-	1258	10	NNC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	-30	0	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_6	138.91484201961	845	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGACTGGAGAGATG	NA	False	NA	1	True	AATAAA	-41	NA	100912321	100896181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100907981_100908075_100908162_100908212_100909233_100909290_100912194
ENSMUSG00000045273.9_100896182_100912407_1	chr13	-	1636	8	NIC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	316	junction_6	18.9413703359625	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGACTGGAGAGATG	NA	False	NA	1	True	AATAAA	-41	NA	100912407	100896181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100908212_100909233_100909290_100912194
ENSMUSG00000045302.14_31112387_31117606_1	chr5	-	2297	8	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	0	0	intron_retention	TRUE	canonical	3	234	junction_6	22.518926280272	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117606	31112386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116757_31117314
ENSMUSG00000045302.14_31112387_31117606_2	chr5	-	2011	9	FSM	ENSMUSG00000045302.14	ENSMUST00000074840.12	6300	9	99	4190	0	0	multi-exon	FALSE	canonical	3	205	junction_7	28.1735691739616	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117606	31112386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
ENSMUSG00000045316.6_25069066_25083424_1	chr17	-	1129	9	Genic_Genomic	ENSMUSG00000045316.6	novel	1473	1	NA	NA	-14086	-1200	multi-exon	FALSE	non_canonical	0	0	junction_1	0	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTATGGCTTCCACC	NA	False	NA	NA	False	NA	NA	NA	25083424	25069065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_-_25069183_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
ENSMUSG00000045328.12_134965806_134979372_1	chr3	+	1506	7	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	47508	0	0	0	3prime_fragment	FALSE	canonical	3	206	junction_1	29.8928642544225	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAAGCCTTGTTGTGTG	NA	False	NA	101	True	TTTAAA	-43	NA	134965805	134979372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ENSMUSG00000045391.5_63079589_63153585_1	chr10	-	3931	25	NIC	ENSMUSG00000045391.5	novel	464	2	NA	NA	-73653	-742	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	448	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGGCGGTGGTTTCGC	NA	False	NA	NA	False	NA	NA	NA	63153585	63079588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ENSMUSG00000045391.5_63079702_63153585_1	chr10	-	3818	25	NIC	ENSMUSG00000045391.5	novel	464	2	NA	NA	-73653	-855	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	433	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGACCCGGATGGAGCGGG	NA	False	NA	NA	False	NA	NA	NA	63153585	63079701	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ENSMUSG00000045391.5_63079702_63153657_1	chr10	-	3890	25	NIC	ENSMUSG00000045391.5	novel	464	2	NA	NA	-73725	-855	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	622	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGACCCGGATGGAGCGGG	NA	False	NA	NA	False	NA	NA	NA	63153657	63079701	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ENSMUSG00000045409.17_36569765_36582318_1	chr17	-	3063	7	FSM	ENSMUSG00000045409.17	ENSMUST00000113706.10	3204	7	141	0	-43	0	multi-exon	FALSE	canonical	3	42	junction_1	8.81286937760152	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTGAGTTGCGTGGTA	NA	False	NA	-8	True	NA	NA	NA	36582318	36569764	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582228
ENSMUSG00000045410.19_4642489_4659201_1	chr13	-	1751	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	-28	1740	-28	-1733	multi-exon	FALSE	canonical	3	141	junction_4	13.8082101181387	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCTGTGTAAAGACACTG	NA	False	NA	NA	False	AATAAA	-20	NA	4659201	4642488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
ENSMUSG00000045410.19_4642580_4659137_1	chr13	-	1596	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	36	1831	-4	-1824	multi-exon	FALSE	canonical	3	141	junction_4	13.8082101181387	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCCTGTCTGTATTAT	NA	False	NA	NA	False	CATAAA	-16	NA	4659137	4642579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
ENSMUSG00000045410.19_4642889_4659137_1	chr13	-	1287	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	36	2140	-4	-2133	multi-exon	FALSE	canonical	3	141	junction_4	13.8082101181387	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTTGACAGAAGTGTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	4659137	4642888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
ENSMUSG00000045410.19_4652504_4659137_1	chr13	-	515	3	ISM	ENSMUSG00000045410.19	ENSMUST00000131982.2	412	4	-4	1228	-4	-1228	5prime_fragment	FALSE	canonical	3	176	junction_2	4	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTCCTGTGACCTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	4659137	4652503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_4652797_4657389_4657558_4659083
ENSMUSG00000045411.17_43896211_43901301_1	chr7	+	1793	8	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	337.565594532744	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACATACAGGCCATCTTG	NA	False	NA	NA	False	NA	NA	NA	43896210	43901301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_43896233_43896661_43896841_43897333_43897488_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_43896211_43901301_2	chr7	+	1460	6	FSM	ENSMUSG00000045411.17	ENSMUST00000137702.8	784	6	59	-735	0	168	multi-exon	FALSE	canonical	3	108	junction_1	258.311904487579	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACATACAGGCCATCTTG	NA	False	NA	NA	False	NA	NA	NA	43896210	43901301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43896233_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_43896211_43901301_3	chr7	+	1475	6	FSM	ENSMUSG00000045411.17	ENSMUST00000055858.14	1982	6	65	442	0	168	multi-exon	FALSE	canonical	3	217	junction_1	215.342889364845	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACATACAGGCCATCTTG	NA	False	NA	NA	False	NA	NA	NA	43896210	43901301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43896248_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_43896211_43901739_1	chr7	+	484	2	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_43896652_43901696
ENSMUSG00000045411.17_43896211_43901739_10	chr7	+	3149	6	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	301.065707113912	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_43896211_43901739_11	chr7	+	1986	6	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_2	324.315032029044	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_43896233_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_43896211_43901739_12	chr7	+	2180	7	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_3	313.179084373285	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_43896248_43896661_43896841_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_43896211_43901739_2	chr7	+	2067	7	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	349.374997515404	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_43896248_43897333_43897488_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_43896211_43901739_3	chr7	+	2246	8	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	327.388554024301	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_43896248_43896661_43896841_43897333_43897488_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_43896211_43901739_4	chr7	+	2064	7	FSM	ENSMUSG00000045411.17	ENSMUST00000185481.7	759	7	33	-1338	0	0	multi-exon	FALSE	canonical	3	30	junction_1	300.418411922808	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43896233_43896674_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_43896211_43901739_5	chr7	+	2079	7	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	293.703743402921	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_43896248_43896674_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_43896211_43901739_6	chr7	+	2231	8	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	337.565594532744	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_43896233_43896661_43896841_43897333_43897488_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_43896211_43901739_7	chr7	+	2218	8	NNC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	340.047415661344	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_43896233_43896674_43896841_43897333_43897488_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_43896211_43901739_8	chr7	+	1898	6	FSM	ENSMUSG00000045411.17	ENSMUST00000137702.8	784	6	59	-1173	0	0	multi-exon	FALSE	canonical	3	108	junction_1	258.311904487579	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43896233_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_43896211_43901739_9	chr7	+	2229	8	FSM	ENSMUSG00000045411.17	ENSMUST00000146155.8	988	8	0	-1241	0	0	multi-exon	FALSE	canonical	0	0	junction_3	335.825391948779	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43896248_43896674_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045435.10_21087505_21091868_1	chr5	+	831	2	FSM	ENSMUSG00000045435.10	ENSMUST00000115259.3	1147	2	316	0	0	0	multi-exon	FALSE	canonical	3	465	junction_1	0	1344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCACATGCCTCTTAC	NA	False	NA	8	True	AATAAA	-18	NA	21087504	21091868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_21087654_21091186
ENSMUSG00000045438.13_139323345_139330933_1	chr5	-	1005	3	FSM	ENSMUSG00000045438.13	ENSMUST00000049630.13	2461	3	55	1401	-1	232	multi-exon	FALSE	canonical	3	183	junction_2	1.5	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTTATTTA	NA	False	NA	-7	True	TTTAAA	-19	NA	139330933	139323344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_139324131_139328317_139328430_139330826
ENSMUSG00000045438.13_139323577_139330933_1	chr5	-	885	4	NIC	ENSMUSG00000045438.13	novel	696	3	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	85.6076320585184	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTGGCTTTTGAC	NA	False	NA	-18	True	AATACA	-14	NA	139330933	139323576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_139324131_139328317_139328430_139328875_139328988_139330826
ENSMUSG00000045438.13_139323577_139330933_2	chr5	-	773	3	FSM	ENSMUSG00000045438.13	ENSMUST00000049630.13	2461	3	55	1633	-1	0	multi-exon	FALSE	canonical	3	183	junction_2	1.5	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTGGCTTTTGAC	NA	False	NA	-18	True	AATACA	-14	NA	139330933	139323576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_139324131_139328317_139328430_139330826
ENSMUSG00000045464.6_94158282_94237024_1	chr2	+	3399	20	NIC	ENSMUSG00000045464.6	novel	2040	2	NA	NA	-78214	-5003	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGCTGCTCACACCGGAAG	NA	False	NA	NA	False	NA	NA	NA	94158281	94237024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_94158831_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ENSMUSG00000045464.6_94237070_94241552_1	chr2	+	991	2	FSM	ENSMUSG00000045464.6	ENSMUST00000152313.2	2040	2	574	475	574	-475	multi-exon	FALSE	canonical	3	34	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTAGGTCATAGGA	NA	False	NA	NA	False	ATTAAA	-17	NA	94237069	94241552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_94237312_94240803
ENSMUSG00000045464.6_94237075_94241139_1	chr2	+	573	2	FSM	ENSMUSG00000045464.6	ENSMUST00000152313.2	2040	2	579	888	579	-888	multi-exon	FALSE	canonical	3	34	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGATTTTTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	94237074	94241139	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_94237312_94240803
ENSMUSG00000045464.6_94237096_94242027_1	chr2	+	1440	2	FSM	ENSMUSG00000045464.6	ENSMUST00000152313.2	2040	2	600	0	600	0	multi-exon	FALSE	canonical	3	34	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAGAATCCTAAGTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	94237095	94242027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_94237312_94240803
ENSMUSG00000045467.14_79906586_79908943_1	chr7	+	927	3	ISM	ENSMUSG00000045467.14	ENSMUST00000107381.8	2392	13	10283	0	9450	0	3prime_fragment	FALSE	canonical	2	15	junction_2	1.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCCGTTTTCACTATT	NA	False	NA	NA	False	AGTAAA	-20	NA	79906585	79908943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_79906779_79907924_79908106_79908390
ENSMUSG00000045538.7_106738154_106780453_1	chr8	-	1847	16	Genic_Genomic	ENSMUSG00000045538.7	novel	2262	1	NA	NA	-41939	-1901	multi-exon	FALSE	non_canonical	0	0	junction_1	0	559	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACACGCCACCCTGATCC	NA	False	NA	NA	False	NA	NA	NA	106780453	106738153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_106738211_106742455_106742598_106752537_106752584_106756983_106757076_106758329_106758374_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
ENSMUSG00000045576.17_104772396_104834176_1	chr3	+	1947	14	FSM	ENSMUSG00000045576.17	ENSMUST00000059271.13	5728	14	577	3204	0	0	multi-exon	FALSE	canonical	3	59	junction_11	6.94526359402813	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTAGTGTATTTTCTTT	657	False	NA	29	True	AATACA	-40	NA	104772395	104834176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
ENSMUSG00000045594.11_114230176_114303445_1	chr9	+	2194	15	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	76.8975265651421	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGGTCCTGTCATTAA	NA	False	NA	24	True	AATAAA	-15	NA	114230175	114303445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_114230338_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
ENSMUSG00000045667.15_72280940_72311397_1	chr11	-	2367	9	NNC	ENSMUSG00000045667.15	novel	2624	8	NA	NA	-8858	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_7	230.188204248176	471	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTGAGTGATCATTGT	NA	False	NA	-1	True	GATAAA	-18	NA	72311397	72280939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72311055_72311162_72311290
ENSMUSG00000045690.9_75677370_75716312_2	chr12	-	2269	4	NNC	ENSMUSG00000045690.9	novel	2979	2	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	69.7678690770727	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGGTATCTTGTCTT	6409	False	NA	-2	True	AATAAA	-17	NA	75716312	75677369	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_75677524_75677545_75677657_75678345_75680283_75716245
ENSMUSG00000045690.9_75677688_75678149_3	chr12	-	162	2	NNC	ENSMUSG00000045690.9	novel	2979	2	NA	NA	38152	-318	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTGTTCTTTTAAAAAAA	NA	False	NA	-23	True	AATAAA	-35	NA	75678149	75677687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_75677721_75678020
ENSMUSG00000045690.9_75677745_75678149_1	chr12	-	192	2	NNC	ENSMUSG00000045690.9	novel	2979	2	NA	NA	38152	-375	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGCTCCCCTGCAAAT	NA	False	NA	-80	True	NA	NA	NA	75678149	75677744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_75677802_75678014
ENSMUSG00000045690.9_75677745_75678149_3	chr12	-	197	2	NNC	ENSMUSG00000045690.9	novel	2979	2	NA	NA	38152	-375	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGCTCCCCTGCAAAT	NA	False	NA	-80	True	NA	NA	NA	75678149	75677744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_75677811_75678018
ENSMUSG00000045690.9_75677745_75678149_6	chr12	-	357	2	NNC	ENSMUSG00000045690.9	novel	2979	2	NA	NA	38152	-375	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGCTCCCCTGCAAAT	NA	False	NA	-80	True	NA	NA	NA	75678149	75677744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_75677849_75677896
ENSMUSG00000045690.9_75677745_75716312_1	chr12	-	2605	2	FSM	ENSMUSG00000045690.9	ENSMUST00000062370.9	2979	2	-1	375	-1	-375	multi-exon	FALSE	canonical	3	148	junction_1	0	10434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGCTCCCCTGCAAAT	6409	False	NA	-80	True	NA	NA	NA	75716312	75677744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_75680283_75716245
ENSMUSG00000045691.15_55332544_55336443_1	chr14	+	2527	2	FSM	ENSMUSG00000045691.15	ENSMUST00000050575.9	2830	2	303	0	303	0	multi-exon	FALSE	canonical	3	37	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGTCTTTATTTCCGTT	NA	False	NA	7	True	AATAAA	-18	NA	55332543	55336443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55333464_55334836
ENSMUSG00000045691.15_55336307_55344018_1	chr14	+	2641	22	NIC	ENSMUSG00000100162.3	novel	4242	7	NA	NA	43357	7575	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACAGAGCTGGGGTTGGT	NA	False	NA	NA	False	NA	NA	NA	55336306	55344018	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ENSMUSG00000045699.5_146914649_146994047_1	chr4	-	651	4	NNC	ENSMUSG00000045699.5	novel	1296	4	NA	NA	0	61504	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	42.4996732013579	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTTCTACCATTAGT	NA	False	NA	NA	False	AATACA	-22	NA	146994047	146914648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_146914904_146978205_146978333_146982168_146982273_146993882
ENSMUSG00000045751.17_24496465_24503413_1	chr4	+	1140	6	NIC	ENSMUSG00000045751.17	novel	1350	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	154.538797717596	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTCATTCTCGTTGAT	-2	True	NA	9	True	AATAAA	-18	NA	24496464	24503413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_24496635_24496841_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931
ENSMUSG00000045751.17_24496465_24503413_2	chr4	+	1150	6	NNC	ENSMUSG00000045751.17	novel	1350	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	143.521426971724	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTCATTCTCGTTGAT	-2	True	NA	9	True	AATAAA	-18	NA	24496464	24503413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_24496635_24496831_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931
ENSMUSG00000045752.14_142622986_142624824_1	chr7	+	1483	3	FSM	ENSMUSG00000045752.14	ENSMUST00000177841.8	1364	3	-119	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	18	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142622985	142624824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_142623251_142623491_142623558_142623672
ENSMUSG00000045752.14_142623161_142624824_1	chr7	+	1549	2	FSM	ENSMUSG00000045752.14	ENSMUST00000133410.3	1091	2	83	-541	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142623160	142624824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_142623558_142623672
ENSMUSG00000045752.14_142623161_142624824_2	chr7	+	1308	3	FSM	ENSMUSG00000045752.14	ENSMUST00000177841.8	1364	3	56	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	18	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142623160	142624824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_142623251_142623491_142623558_142623672
ENSMUSG00000045752.14_142623161_142624824_3	chr7	+	809	4	NIC	ENSMUSG00000045752.14	novel	895	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	63.0202789231812	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142623160	142624824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_142623251_142623491_142623558_142623672_142624030_142624528
ENSMUSG00000045752.14_142623161_142624824_4	chr7	+	1338	3	FSM	ENSMUSG00000045752.14	ENSMUST00000060433.10	1519	3	175	6	0	0	multi-exon	FALSE	canonical	3	158	junction_2	1	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142623160	142624824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_142623251_142623491_142623588_142623672
ENSMUSG00000045752.14_142623161_142624824_5	chr7	+	1423	2	ISM	ENSMUSG00000045752.14	ENSMUST00000105920.8	895	4	56	0	0	0	intron_retention	FALSE	canonical	3	160	junction_1	0	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142623160	142624824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_142623251_142623491
ENSMUSG00000045767.10_55847487_55851313_1	chr13	+	3653	2	NNC	ENSMUSG00000045767.10	novel	4652	2	NA	NA	6550	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	353	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTACTACTTTATTTT	NA	False	NA	19	True	AATAAA	-19	NA	55847486	55851313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_55848027_55848200
ENSMUSG00000045854.5_32800282_32802267_1	chr4	+	1320	3	FSM	ENSMUSG00000045854.5	ENSMUST00000062802.5	465	3	29	-884	0	708	multi-exon	FALSE	canonical	3	270	junction_2	3	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCATCATTAAGGAGCAT	14	True	NA	NA	False	NA	NA	NA	32800281	32802267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_32800336_32800609_32800751_32801142
ENSMUSG00000045896.15_83783040_83808695_1	chr6	-	3297	5	FSM	ENSMUSG00000045896.15	ENSMUST00000058383.9	3982	5	28	657	0	-657	multi-exon	FALSE	canonical	3	74	junction_4	4.71036092035419	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCAGGTTATTGTTA	NA	False	NA	NA	False	AATAAA	-22	NA	83808695	83783039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83785875_83786880_83787058_83791703_83791852_83808252_83808311_83808616
ENSMUSG00000045917.18_63477018_63502965_1	chr4	+	2136	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	0	1629	0	-1625	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTGGTGTGAAGGTCTT	NA	False	NA	NA	False	NA	NA	NA	63477017	63502965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ENSMUSG00000045917.18_63477018_63503232_1	chr4	+	2403	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	0	1362	0	-1358	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTACCCATCTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	63477017	63503232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ENSMUSG00000045948.9_28439066_28441213_2	chr7	-	685	3	NNC	ENSMUSG00000045948.9	novel	722	3	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_1	251.5	2234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1676	False	NA	-5	True	AATAAA	-24	NA	28441213	28439065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_28439659_28440911_28440980_28441189
ENSMUSG00000045948.9_28439066_28441213_3	chr7	-	682	3	NNC	ENSMUSG00000045948.9	novel	722	3	NA	NA	-18	0	intron_retention	FALSE	canonical	3	20	junction_2	459.5	3125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1676	False	NA	-5	True	AATAAA	-24	NA	28441213	28439065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_28439665_28440911_28440980_28441198
ENSMUSG00000045948.9_28439066_28441263_1	chr7	-	701	3	NNC	ENSMUSG00000045948.9	novel	722	3	NA	NA	-18	0	intron_retention	FALSE	canonical	3	18	junction_2	460.5	3167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1626	False	NA	-5	True	AATAAA	-24	NA	28441263	28439065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_28439665_28440911_28440980_28441229
ENSMUSG00000045962.17_119902936_119925066_1	chr6	-	2386	10	ISM	ENSMUSG00000045962.17	ENSMUST00000203030.3	8163	26	89554	1354	0	604	3prime_fragment	FALSE	canonical	3	12	junction_5	2.94811092476036	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCCCTCAACAATGCAC	8632	False	NA	NA	False	NA	NA	NA	119925066	119902935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_119903649_119904007_119904196_119911216_119911412_119913329_119913533_119914317_119914980_119916598_119916664_119920766_119920828_119921661_119921746_119923197_119923282_119924935
ENSMUSG00000045962.17_119924949_119929864_1	chr6	-	2384	8	ISM	ENSMUSG00000045962.17	ENSMUST00000088646.12	8364	26	84756	23367	-905	2335	internal_fragment	FALSE	canonical	2	7	junction_4	4.22335585688414	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAGACTGTGGTAAGAG	3834	False	NA	NA	False	AGTAAA	-25	NA	119929864	119924948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_119926381_119926968_119927092_119927203_119927262_119927459_119927634_119927975_119928093_119928595_119928759_119928858_119928957_119929645
ENSMUSG00000045969.9_11606790_11613251_1	chr8	+	2090	2	FSM	ENSMUSG00000045969.9	ENSMUST00000054399.6	2814	2	724	0	679	0	multi-exon	FALSE	canonical	3	454	junction_1	0	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTTTATTTCCTTATG	NA	False	NA	16	True	NA	NA	NA	11606789	11613251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_11607046_11611417
ENSMUSG00000045969.9_11606910_11613251_1	chr8	+	1970	2	FSM	ENSMUSG00000045969.9	ENSMUST00000054399.6	2814	2	844	0	799	0	multi-exon	FALSE	canonical	3	454	junction_1	0	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTTTATTTCCTTATG	NA	False	NA	16	True	NA	NA	NA	11606909	11613251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_11607046_11611417
ENSMUSG00000045969.9_11608429_11612477_1	chr8	+	1198	2	FSM	ENSMUSG00000045969.9	ENSMUST00000209565.2	1971	2	0	773	0	429	multi-exon	FALSE	canonical	3	111	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCAGGTTGCTGAAGTA	NA	False	NA	NA	False	NA	NA	NA	11608428	11612477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_11608567_11611417
ENSMUSG00000045973.19_45398422_45408761_1	chr4	-	1934	3	FSM	ENSMUSG00000045973.19	ENSMUST00000107796.8	4433	3	0	2499	0	819	multi-exon	FALSE	canonical	3	68	junction_2	5.5	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGGGTTTTAATGCAA	-17	True	NA	NA	False	AATAAA	-19	NA	45408761	45398421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_45400180_45404726_45404836_45408694
ENSMUSG00000045983.17_20491499_20499699_1	chr16	+	1821	11	ISM	ENSMUSG00000045983.17	ENSMUST00000073840.12	5394	32	0	11932	0	-784	5prime_fragment	FALSE	canonical	3	236	junction_1	319.781175180779	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGAGGGCAGCATGGT	NA	False	NA	NA	False	NA	NA	NA	20491498	20499699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639
ENSMUSG00000045996.13_36174179_36177157_1	chr15	+	464	4	NNC	ENSMUSG00000045996.13	novel	601	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	332.667334668668	5656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTATTCAATGTCTTG	132	False	NA	NA	False	ATTAAA	-16	NA	36174178	36177157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_36174228_36175132_36175197_36175529_36175623_36176899
ENSMUSG00000046000.6_97530286_97540238_1	chr5	-	3195	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	0	229	0	-229	multi-exon	FALSE	canonical	3	176	junction_1	0	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTATGTAATGCTGATAC	NA	False	NA	-8	True	AATAAA	-17	NA	97540238	97530285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_97532729_97539486
ENSMUSG00000046000.6_97531153_97540238_1	chr5	-	2328	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	0	1096	0	-1096	multi-exon	FALSE	canonical	3	176	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTGTCAATATGTCTTT	NA	False	NA	1	True	GATAAA	-21	NA	97540238	97531152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_97532729_97539486
ENSMUSG00000046005.5_31645977_31650621_1	chr14	+	652	2	NNC	ENSMUSG00000046005.5	novel	3897	2	NA	NA	17492	-3052	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTGTTTTCTTCATCT	4910	False	NA	NA	False	NA	NA	NA	31645976	31650621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_31646028_31650020
ENSMUSG00000046005.5_31651545_31653675_1	chr14	+	1478	2	NNC	ENSMUSG00000046005.5	novel	3897	2	NA	NA	23060	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTGTGAATATGACATT	NA	False	NA	NA	False	AATAAA	-15	NA	31651544	31653675	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_31651667_31652319
ENSMUSG00000046020.14_153083471_153108078_1	chr2	+	1493	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	18	4089	0	246	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATATGTGTGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	153083470	153108078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ENSMUSG00000046020.14_153083471_153108423_1	chr2	+	1838	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	18	3744	0	0	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGCCTATTGGCTGCT	NA	False	NA	NA	False	TATAAA	-26	NA	153083470	153108423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ENSMUSG00000046027.18_83281208_83290325_1	chr7	+	1194	6	NNC	ENSMUSG00000046027.18	novel	2832	7	NA	NA	0	-1211	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	71.3649774048868	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTGATCTCTTCCATC	NA	False	NA	38	True	TTTAAA	-40	NA	83281207	83290325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289666
ENSMUSG00000046031.8_34002063_34003513_1	chr10	-	627	2	FSM	ENSMUSG00000046031.8	ENSMUST00000062784.8	1094	2	467	0	467	0	multi-exon	FALSE	canonical	3	41	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTTCTCCCAAGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	34003513	34002062	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_34002563_34003386
ENSMUSG00000046031.8_34002063_34003708_1	chr10	-	822	2	FSM	ENSMUSG00000046031.8	ENSMUST00000062784.8	1094	2	272	0	272	0	multi-exon	FALSE	canonical	3	41	junction_1	0	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTTCTCCCAAGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	34003708	34002062	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_34002563_34003386
ENSMUSG00000046032.17_100255565_100266155_1	chrX	-	2373	5	NNC	ENSMUSG00000046032.17	novel	2415	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	198.383939622138	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTTTTTCTCCTTAA	NA	False	NA	-15	True	ATTAAA	-15	NA	100266155	100255564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_100256366_100256407_100257471_100258006_100258132_100259088_100259185_100265867
ENSMUSG00000046032.17_100255565_100266155_2	chrX	-	2369	5	NNC	ENSMUSG00000046032.17	novel	2415	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	198.383939622138	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTTTTTCTCCTTAA	NA	False	NA	-15	True	ATTAAA	-15	NA	100266155	100255564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_100256362_100256407_100257471_100258006_100258132_100259088_100259185_100265867
ENSMUSG00000046032.17_100255565_100266155_3	chrX	-	976	5	NNC	ENSMUSG00000046032.17	novel	1002	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	205.184520614982	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTTTTTCTCCTTAA	NA	False	NA	-15	True	ATTAAA	-15	NA	100266155	100255564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_100255953_100257379_100257471_100258006_100258132_100259088_100259185_100265879
ENSMUSG00000046032.17_100255565_100266155_4	chrX	-	988	5	FSM	ENSMUSG00000046032.17	ENSMUST00000077876.4	1002	5	14	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	142.088880634622	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTTTTTCTCCTTAA	NA	False	NA	-15	True	ATTAAA	-15	NA	100266155	100255564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_100255953_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ENSMUSG00000046032.17_100255565_100266155_5	chrX	-	1091	6	NNC	ENSMUSG00000046032.17	novel	1002	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	219.123344260715	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTTTTTCTCCTTAA	NA	False	NA	-15	True	ATTAAA	-15	NA	100266155	100255564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_100255953_100257177_100257281_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ENSMUSG00000046062.6_133059082_133064734_2	chr1	+	2606	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	201	2787	0	-2787	multi-exon	FALSE	canonical	3	372	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGTTTGATTATTTTT	5768	False	NA	19	True	AAGAAA	-16	NA	133059081	133064734	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_133061354_133064400
ENSMUSG00000046062.6_133059082_133066187_1	chr1	+	4059	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	201	1334	0	-1334	multi-exon	FALSE	canonical	3	372	junction_1	0	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGCATTGTAGACATTT	5768	False	NA	15	True	CATAAA	-15	NA	133059081	133066187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_133061354_133064400
ENSMUSG00000046062.6_133059082_133067521_1	chr1	+	5393	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	201	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	0	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGTGACTTTATGTAT	5768	False	NA	15	True	AATAAA	-20	NA	133059081	133067521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_133061354_133064400
ENSMUSG00000046101.17_10012250_10014343_1	chr1	+	401	4	NIC	ENSMUSG00000046101.17	novel	3249	16	NA	NA	9905	2033	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	4518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGCCCAGCGTGCGCG	NA	False	NA	NA	False	NA	NA	NA	10012249	10014343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_10012375_10012547_10012617_10012834_10012943_10014244
ENSMUSG00000046101.17_10012250_10014343_2	chr1	+	400	4	NNC	ENSMUSG00000046101.17	novel	3249	16	NA	NA	9905	2033	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2123	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGCCCAGCGTGCGCG	NA	False	NA	NA	False	NA	NA	NA	10012249	10014343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_10012381_10012547_10012610_10012834_10012943_10014244
ENSMUSG00000046101.17_10012250_10014343_3	chr1	+	400	4	NNC	ENSMUSG00000046101.17	novel	3249	16	NA	NA	9905	2033	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2619	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGCCCAGCGTGCGCG	NA	False	NA	NA	False	NA	NA	NA	10012249	10014343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_10012381_10012554_10012617_10012834_10012943_10014244
ENSMUSG00000046101.17_10012250_10014343_4	chr1	+	394	4	NNC	ENSMUSG00000046101.17	novel	3249	16	NA	NA	9905	2033	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	598	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGCCCAGCGTGCGCG	NA	False	NA	NA	False	NA	NA	NA	10012249	10014343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_10012375_10012547_10012610_10012834_10012943_10014244
ENSMUSG00000046101.17_10012250_10014343_5	chr1	+	381	4	NNC	ENSMUSG00000046101.17	novel	3249	16	NA	NA	9905	2033	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	738	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGCCCAGCGTGCGCG	NA	False	NA	NA	False	NA	NA	NA	10012249	10014343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_10012381_10012547_10012617_10012834_10012917_10014244
ENSMUSG00000046101.17_10012250_10014343_6	chr1	+	393	4	NNC	ENSMUSG00000046101.17	novel	3249	16	NA	NA	9905	2033	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGCCCAGCGTGCGCG	NA	False	NA	NA	False	NA	NA	NA	10012249	10014343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_10012375_10012547_10012617_10012834_10012943_10014252
ENSMUSG00000046101.17_10012250_10014343_7	chr1	+	399	4	NNC	ENSMUSG00000046101.17	novel	3249	16	NA	NA	9905	2033	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4614	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGCCCAGCGTGCGCG	NA	False	NA	NA	False	NA	NA	NA	10012249	10014343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_10012381_10012547_10012617_10012834_10012943_10014252
ENSMUSG00000046111.18_15217556_15228274_1	chr9	-	1342	13	Fusion	ENSMUSG00000046111.19_ENSMUSG00000031938.16	novel	4144	13	NA	NA	979	-3626	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCGGCGCCCAGCAGCC	NA	False	NA	NA	False	NA	NA	NA	15228274	15217555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr9_-_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
ENSMUSG00000046111.18_15217556_15228274_2	chr9	-	2061	11	Fusion	ENSMUSG00000046111.19_ENSMUSG00000031938.16	novel	4144	13	NA	NA	979	-3626	intron_retention	FALSE	non_canonical	0	0	junction_1	0	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCGGCGCCCAGCAGCC	NA	False	NA	NA	False	NA	NA	NA	15228274	15217555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr9_-_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15226428_15226678_15226737_15228184
ENSMUSG00000046133.4_101746852_101750986_1	chr4	-	1278	3	FSM	ENSMUSG00000046133.4	ENSMUST00000051043.4	913	3	0	-365	0	365	multi-exon	FALSE	canonical	3	233	junction_2	115.5	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTCAATTTCTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	101750986	101746851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_101747741_101747885_101748198_101750909
ENSMUSG00000046133.4_101747217_101760888_1	chr4	-	1010	4	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9902	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	190.887983441133	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTTCTTCTTGATGT	NA	False	NA	-2	True	ATTAAA	-26	NA	101760888	101747216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_101747741_101747885_101748198_101760342_101760431_101760802
ENSMUSG00000046133.4_101747217_101760888_2	chr4	-	922	3	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9902	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	232	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTTCTTCTTGATGT	NA	False	NA	-2	True	ATTAAA	-26	NA	101760888	101747216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_101747741_101747885_101748198_101760802
ENSMUSG00000046133.4_101747217_101760888_3	chr4	-	1382	3	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9902	0	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_2	141	1298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTTCTTCTTGATGT	NA	False	NA	-2	True	ATTAAA	-26	NA	101760888	101747216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_101747741_101747885_101748198_101760342
ENSMUSG00000046139.9_11889807_11922334_1	chr19	+	4051	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	44	121	0	-121	multi-exon	FALSE	canonical	3	210	junction_1	27.8366043764299	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	7	True	AATAAA	-21	NA	11889806	11922334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ENSMUSG00000046179.18_48520730_48530806_1	chr7	-	2097	10	ISM	ENSMUSG00000046179.18	ENSMUST00000058745.15	3691	13	-17	4553	-17	1125	5prime_fragment	FALSE	canonical	3	118	junction_9	15.6347191994114	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGACACCACCCCCTGG	NA	False	NA	NA	False	NA	NA	NA	48530806	48520729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
ENSMUSG00000046204.15_67148691_67155005_1	chr14	+	1979	3	FSM	ENSMUSG00000046204.15	ENSMUST00000089236.11	5518	3	72	3467	0	-1259	multi-exon	FALSE	canonical	3	15	junction_1	6.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGAACTTTAGTTTCCT	NA	False	NA	NA	False	AATACA	-24	NA	67148690	67155005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_67148743_67152770_67152900_67153207
ENSMUSG00000046229.11_156153766_156154455_4	chr2	-	162	2	NNC	ENSMUSG00000046229.11	novel	803	2	NA	NA	212	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	130	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTGTGTCTTGCGTT	NA	False	NA	-4	True	AATAAA	-23	NA	156154455	156153765	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_156153894_156154421
ENSMUSG00000046311.14_49094333_49109636_1	chr11	+	3914	4	FSM	ENSMUSG00000046311.14	ENSMUST00000109198.8	3872	4	214	-256	0	0	multi-exon	FALSE	canonical	3	79	junction_1	17.4547032821147	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAGTAGAGAGTCATT	1380	False	NA	31	True	AATAAA	-40	NA	49094332	49109636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_49094366_49103521_49103604_49104416_49104470_49105890
ENSMUSG00000046312.5_41497439_41503110_1	chr4	-	2372	2	FSM	ENSMUSG00000046312.5	ENSMUST00000054920.5	4173	2	-34	1835	-34	-1835	multi-exon	FALSE	canonical	3	158	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTCATACAGACTTTTAA	-26	True	NA	NA	False	NA	NA	NA	41503110	41497438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41499691_41502990
ENSMUSG00000046330.11_72750449_72752778_2	chr1	+	364	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	0	194	0	2	multi-exon	FALSE	canonical	2	9164	junction_1	3956.18005993998	175662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTGCCTTGT	NA	False	NA	0	True	AATAAA	-17	NA	72750448	72752778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
ENSMUSG00000046330.11_72750449_72752778_3	chr1	+	356	4	NNC	ENSMUSG00000046330.11	novel	558	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7606.40918348906	55882	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTGCCTTGT	NA	False	NA	0	True	AATAAA	-17	NA	72750448	72752778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_72750483_72750830_72750952_72751300_72751384_72752660
ENSMUSG00000046330.11_72750449_72752832_1	chr1	+	418	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	0	140	0	56	multi-exon	FALSE	canonical	2	9164	junction_1	3956.18005993998	184168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTATTTTCGAAAGATG	NA	False	NA	33	True	ATTAAA	-20	NA	72750448	72752832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
ENSMUSG00000046330.11_72750449_72752832_2	chr1	+	416	4	NNC	ENSMUSG00000046330.11	novel	558	4	NA	NA	0	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7606.40918348906	77983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTATTTTCGAAAGATG	NA	False	NA	33	True	ATTAAA	-20	NA	72750448	72752832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_72750483_72750830_72750964_72751306_72751384_72752660
ENSMUSG00000046338.5_127267119_127278012_1	chr2	+	2616	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	44	junction_1	48.8950470250594	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	5001	False	NA	14	True	AATAAA	-25	NA	127267118	127278012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ENSMUSG00000046338.5_127267119_127278012_2	chr2	+	2566	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	54.5121842462079	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	5001	False	NA	14	True	AATAAA	-25	NA	127267118	127278012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_127267142_127269222_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ENSMUSG00000046351.12_23539512_23553378_1	chr13	-	2680	5	FSM	ENSMUSG00000046351.12	ENSMUST00000125328.2	815	5	-14	-1851	0	1689	multi-exon	FALSE	canonical	3	71	junction_1	23.1124966197942	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGTATAAGTAGGGTG	9006	False	NA	-10	True	AATAAA	-15	NA	23553378	23539511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553304
ENSMUSG00000046364.15_109118403_109120973_1	chr7	+	507	5	NNC	ENSMUSG00000046364.15	novel	760	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	6450.25991724365	225103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCTTTGCATCCTT	NA	False	NA	2	True	ATTAAA	-14	NA	109118402	109120973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_109118430_109118791_109118860_109119129_109119201_109119674_109119850_109120807
ENSMUSG00000046364.15_109118403_109120973_2	chr7	+	508	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	49	601	0	0	multi-exon	FALSE	canonical	3	7451	junction_1	3855.66202972978	229332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCTTTGCATCCTT	NA	False	NA	2	True	ATTAAA	-14	NA	109118402	109120973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
ENSMUSG00000046380.4_74576408_74581139_1	chr15	-	3350	2	FSM	ENSMUSG00000046380.4	ENSMUST00000050234.4	5853	2	245	2258	245	-2258	multi-exon	FALSE	canonical	3	23	junction_1	0	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTCATGATTCTTCA	NA	False	NA	2	True	NA	NA	NA	74581139	74576407	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_74579714_74581095
ENSMUSG00000046402.11_98306873_98328628_1	chr9	+	785	4	NNC	ENSMUSG00000046402.11	novel	2652	4	NA	NA	1859	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.1976430375211	830	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTACCTTCACTTGTTTT	4744	False	NA	41	True	AATAAA	-42	NA	98306872	98328628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_98307105_98307505_98307685_98326642_98326745_98328356
ENSMUSG00000046402.11_98306924_98328628_1	chr9	+	742	4	FSM	ENSMUSG00000046402.11	ENSMUST00000052068.11	2652	4	1910	0	1910	0	multi-exon	FALSE	canonical	3	98	junction_1	8.01387685344754	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTACCTTCACTTGTTTT	4795	False	NA	41	True	AATAAA	-42	NA	98306923	98328628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_98307105_98307505_98307685_98326642_98326745_98328348
ENSMUSG00000046434.17_103148460_103153384_1	chr15	+	1799	11	NNC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	-399	2	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_1	4002.55468919539	32751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	False	NA	1	True	AATAAA	-19	NA	103148459	103153384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_103148545_103148905_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ENSMUSG00000046434.17_103148881_103152992_1	chr15	+	1347	10	FSM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	0	390	0	-390	multi-exon	FALSE	canonical	3	9291	junction_7	1545.88284736515	9124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTCTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	103148880	103152992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ENSMUSG00000046434.17_103148881_103152992_2	chr15	+	1506	11	FSM	ENSMUSG00000046434.17	ENSMUST00000036004.16	1918	11	22	390	0	-390	multi-exon	FALSE	canonical	3	2223	junction_7	4396.07925429012	3895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTCTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	103148880	103152992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
ENSMUSG00000046463.6_37017085_37027313_1	chr10	+	1058	3	FSM	ENSMUSG00000046463.6	ENSMUST00000217338.2	337	3	0	-721	0	2	multi-exon	FALSE	canonical	3	7	junction_1	7.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	6	True	NA	NA	NA	37017084	37027313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_37017182_37024872_37025003_37026482
ENSMUSG00000046463.6_37018463_37027313_1	chr10	+	1016	3	NNC	ENSMUSG00000046463.6	novel	1791	3	NA	NA	1378	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	8.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	6	True	NA	NA	NA	37018462	37027313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_37018518_37024872_37025003_37026482
ENSMUSG00000046516.11_38167384_38173114_1	chr16	+	457	4	NIC	ENSMUSG00000046516.11	novel	444	3	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	81	junction_3	1753.17641883398	14949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGAACCGTCTTTGTT	NA	False	NA	17	True	ATTAAA	-19	NA	38167383	38173114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_38167570_38169602_38169692_38170038_38170094_38172987
ENSMUSG00000046550.9_152615237_152617239_1	chrX	+	1256	3	FSM	ENSMUSG00000046550.9	ENSMUST00000123264.2	536	3	0	-720	0	0	multi-exon	FALSE	canonical	3	17	junction_1	2	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTCATCTAAAAAATTGA	NA	False	NA	NA	False	AATAAA	-19	NA	152615236	152617239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_152615326_152615430_152615545_152616186
ENSMUSG00000046567.11_100414103_100425097_1	chr10	-	614	4	ISM	ENSMUSG00000046567.11	ENSMUST00000054471.10	2564	7	160	5976	0	112	5prime_fragment	FALSE	canonical	3	50	junction_2	5.18544972870135	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTAATCTAGCTCTT	NA	False	NA	NA	False	AATAAA	-22	NA	100425097	100414102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_100414294_100419775_100419872_100422052_100422171_100424888
ENSMUSG00000046572.11_38832099_38842103_1	chr5	-	544	4	FSM	ENSMUSG00000046572.11	ENSMUST00000057258.11	6804	4	-10	6270	-3	-129	multi-exon	FALSE	canonical	3	45	junction_3	106.871677986057	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGCTGCTCCACCAGT	NA	False	NA	NA	False	ATTAAA	-14	NA	38842103	38832098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_38832197_38839827_38840126_38840535_38840602_38842021
ENSMUSG00000046573.8_36163441_36301340_1	chr13	-	854	3	FSM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	169	1063	169	-1063	multi-exon	FALSE	canonical	3	325	junction_1	9.5	380	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCATTTATTTCCTGACA	NA	False	NA	NA	False	AATAAA	-15	NA	36301340	36163440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_36163891_36276788_36276910_36301057
ENSMUSG00000046598.16_31247566_31276315_1	chr16	+	1718	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	0	1404	0	0	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTGTGTGCATGAAA	NA	False	NA	25	True	AGTAAA	-15	NA	31247565	31276315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ENSMUSG00000046598.16_31247610_31276043_1	chr16	+	1402	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	44	1676	0	3	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTTCAATGTGGTGAATG	NA	False	NA	13	True	NA	NA	NA	31247609	31276043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ENSMUSG00000046598.16_31247610_31276315_1	chr16	+	1674	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	44	1404	0	0	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTGTGTGCATGAAA	NA	False	NA	25	True	AGTAAA	-15	NA	31247609	31276315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ENSMUSG00000046667.15_12140317_12146745_1	chr4	+	2926	4	NNC	ENSMUSG00000046667.15	novel	3069	3	NA	NA	0	14	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	14.7196014438797	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTATTCATTGTGTT	16	False	NA	NA	False	AATAAA	-32	NA	12140316	12146745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_12140384_12140540_12140606_12143409_12143460_12144001
ENSMUSG00000046668.10_35963250_35994746_1	chr18	+	2151	3	NIC	ENSMUSG00000046668.10	novel	1169	2	NA	NA	-117	5	combination_of_known_junctions	FALSE	canonical	3	329	junction_2	30	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCTTCTTGCTCTTG	NA	False	NA	39	True	AATAAA	-30	NA	35963249	35994746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_35963293_35991445_35992510_35993702
ENSMUSG00000046668.10_35963367_35994741_1	chr18	+	2189	3	NIC	ENSMUSG00000046668.10	novel	857	2	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	135.5	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACTCCTGGCTTCTTGC	NA	False	NA	34	True	AATAAA	-25	NA	35963366	35994741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_35963453_35991445_35992510_35993702
ENSMUSG00000046671.19_134252875_134262609_1	chr4	-	1868	7	NNC	ENSMUSG00000046671.19	novel	1969	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	198.402578948292	973	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGAATTTTTTTCTTG	NA	False	NA	-7	True	ATTAAA	-16	NA	134262609	134252874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260059_134262560
ENSMUSG00000046671.19_134253416_134262609_1	chr4	-	1327	7	NNC	ENSMUSG00000046671.19	novel	1969	7	NA	NA	0	-541	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	198.402578948292	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTCTCCATAATTG	NA	False	NA	-2	True	AATGAA	-18	NA	134262609	134253415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260059_134262560
ENSMUSG00000046675.8_102710021_102711502_1	chr12	+	653	2	NNC	ENSMUSG00000046675.8	novel	3367	2	NA	NA	0	-2318	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	0	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCAGTCTTTAGAAACTT	NA	False	NA	NA	False	AGTAAA	-15	NA	102710020	102711502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_102710030_102710858
ENSMUSG00000046675.8_102710021_102711662_1	chr12	+	813	2	NNC	ENSMUSG00000046675.8	novel	3367	2	NA	NA	0	-2158	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	0	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTTGCTTGCTTTAAAA	NA	False	NA	3	True	CATAAA	-18	NA	102710020	102711662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_102710030_102710858
ENSMUSG00000046679.17_86415356_86416470_1	chr6	+	717	3	NNC	ENSMUSG00000046679.17	novel	505	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	0.5	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCATTTCTCGGGTCTCA	1453	False	NA	NA	False	ATTAAA	-1	NA	86415355	86416470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_86415470_86415591_86415830_86416105
ENSMUSG00000046691.15_107612937_107620172_1	chr8	-	436	4	FSM	ENSMUSG00000046691.15	ENSMUST00000177068.8	2931	4	53	2442	-25	-183	multi-exon	FALSE	canonical	3	308	junction_2	18.5472369909914	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGAACCCCGGATTTTC	NA	False	NA	NA	False	AAGAAA	-4	NA	107620172	107612936	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_107613159_107613551_107613670_107613932_107613989_107620132
ENSMUSG00000046707.10_96174602_96214304_1	chr8	-	1411	11	ISM	ENSMUSG00000046707.10	ENSMUST00000056919.9	3773	12	1151	1878	-90	0	3prime_fragment	FALSE	canonical	3	171	junction_1	42.5169378013046	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGATGGAGCGTATTTA	NA	False	NA	-6	True	AATAAA	-13	NA	96214304	96174601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192
ENSMUSG00000046711.17_27775627_27782645_1	chr17	+	1634	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232253.2	600	5	12	-1046	0	1	multi-exon	FALSE	canonical	3	289	junction_4	2144.39797787164	10036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	AATAAA	-24	NA	27775626	27782645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781414
ENSMUSG00000046711.17_27775627_27782645_2	chr17	+	365	4	NNC	ENSMUSG00000046711.17	novel	1595	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1773.09152486711	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	AATAAA	-24	NA	27775626	27782645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_27775686_27778506_27778678_27779901_27779986_27782594
ENSMUSG00000046711.17_27775627_27782645_3	chr17	+	1604	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232552.2	917	5	12	-699	0	1	multi-exon	FALSE	canonical	3	1035	junction_1	1979.76797882984	6438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	AATAAA	-24	NA	27775626	27782645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_27775724_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ENSMUSG00000046718.9_71986899_71989975_1	chr8	-	667	5	FSM	ENSMUSG00000046718.9	ENSMUST00000051672.9	792	5	125	0	0	0	multi-exon	FALSE	canonical	3	305	junction_3	21.2176223927187	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGCTTCTAAGTTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	71989975	71986898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71987125_71987315_71987437_71988429_71988470_71989002_71989079_71989771
ENSMUSG00000046721.12_44974389_44975102_11	chr7	+	201	2	Genic_Genomic	ENSMUSG00000046721.12	novel	653	1	NA	NA	0	61	multi-exon	FALSE	non_canonical	0	0	junction_1	0	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTGCCCCACAAACCAAAA	NA	False	NA	NA	False	AATAAA	-45	NA	44974388	44975102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44974488_44975000
ENSMUSG00000046721.12_44974389_44975102_3	chr7	+	614	2	Genic_Genomic	ENSMUSG00000046721.12	novel	653	1	NA	NA	0	61	multi-exon	FALSE	non_canonical	0	0	junction_1	0	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTGCCCCACAAACCAAAA	NA	False	NA	NA	False	AATAAA	-45	NA	44974388	44975102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44974450_44974549
ENSMUSG00000046721.12_44974389_44975102_4	chr7	+	657	2	Genic_Genomic	ENSMUSG00000046721.12	novel	653	1	NA	NA	0	61	multi-exon	FALSE	canonical	0	0	junction_1	0	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTGCCCCACAAACCAAAA	NA	False	NA	NA	False	AATAAA	-45	NA	44974388	44975102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44974476_44974532
ENSMUSG00000046721.12_44974389_44975102_6	chr7	+	621	2	Genic_Genomic	ENSMUSG00000046721.12	novel	653	1	NA	NA	0	61	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTGCCCCACAAACCAAAA	NA	False	NA	NA	False	AATAAA	-45	NA	44974388	44975102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44974884_44974976
ENSMUSG00000046721.12_44974389_44975102_7	chr7	+	516	2	Genic_Genomic	ENSMUSG00000046721.12	novel	653	1	NA	NA	0	61	multi-exon	FALSE	canonical	0	0	junction_1	0	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTGCCCCACAAACCAAAA	NA	False	NA	NA	False	AATAAA	-45	NA	44974388	44975102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44974614_44974811
ENSMUSG00000046721.12_44974389_44975102_9	chr7	+	633	2	Genic_Genomic	ENSMUSG00000046721.12	novel	653	1	NA	NA	0	61	multi-exon	FALSE	canonical	0	0	junction_1	0	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTGCCCCACAAACCAAAA	NA	False	NA	NA	False	AATAAA	-45	NA	44974388	44975102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44974476_44974556
ENSMUSG00000046722.15_95136121_95141893_1	chr3	+	900	5	FSM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	78	1827	0	0	multi-exon	FALSE	canonical	3	354	junction_1	33.5885024971343	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGCTTTTATTCTCTA	1952	False	NA	NA	False	AATGAA	-23	NA	95136120	95141893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95136177_95139095_95139404_95139859_95139971_95140798_95140891_95141560
ENSMUSG00000046722.15_95136121_95142201_1	chr3	+	1208	5	FSM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	78	1519	0	228	multi-exon	FALSE	canonical	3	354	junction_1	33.5885024971343	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCATCTTGCTATCTCTG	1952	False	NA	42	True	ATTAAA	-26	NA	95136120	95142201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95136177_95139095_95139404_95139859_95139971_95140798_95140891_95141560
ENSMUSG00000046733.8_135042649_135061414_2	chr6	+	1790	4	FSM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	0	293	0	-293	multi-exon	FALSE	canonical	3	121	junction_1	5.71547606649408	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAACTCACTGCCAACCC	NA	False	NA	NA	False	NA	NA	NA	135042648	135061414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_135042774_135055543_135056483_135060440_135060497_135060744
ENSMUSG00000046733.8_135042649_135061707_1	chr6	+	2251	5	NNC	ENSMUSG00000046733.8	novel	2083	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64.8127109446905	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTATTTATTTATTT	NA	False	NA	32	True	AATAAA	-32	NA	135042648	135061707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_135042774_135043619_135043788_135055543_135056483_135060440_135060497_135060744
ENSMUSG00000046756.11_115494751_115498194_1	chr11	+	1294	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	0	668	0	367	multi-exon	TRUE	canonical	3	642	junction_4	47.0451910401053	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCCATTCTGTGAGTCT	NA	False	NA	12	True	NA	NA	NA	115494750	115498194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
ENSMUSG00000046756.11_115494966_115498140_1	chr11	+	1025	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	215	722	215	313	multi-exon	FALSE	canonical	3	642	junction_4	47.0451910401053	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGTTGGAAAGTTCTG	NA	False	NA	10	True	AATAAA	-15	NA	115494965	115498140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
ENSMUSG00000046756.11_115495018_115498194_1	chr11	+	1027	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	267	668	267	367	multi-exon	FALSE	canonical	3	642	junction_4	47.0451910401053	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCCATTCTGTGAGTCT	NA	False	NA	12	True	NA	NA	NA	115495017	115498194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
ENSMUSG00000046756.11_115498744_115503746_1	chr11	+	1323	6	NIC	ENSMUSG00000046756.11	novel	1962	5	NA	NA	3051	4884	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCAGACTCTCCCCGGCC	NA	False	NA	NA	False	NA	NA	NA	115498743	115503746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503610
ENSMUSG00000046774.18_100838262_100842247_1	chrX	+	2179	6	NIC	ENSMUSG00000046774.18	novel	1991	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	236	junction_4	22.2656686403081	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838261	100842247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841990_100842072
ENSMUSG00000046774.18_100838262_100842247_2	chrX	+	2003	7	NIC	ENSMUSG00000046774.18	novel	1991	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	47	junction_5	86.9329243344162	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838261	100842247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841772_100841947_100841990_100842072
ENSMUSG00000046792.9_6144257_6158970_1	chr7	-	322	4	NNC	ENSMUSG00000046792.9	novel	880	2	NA	NA	0	1028	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.6130247122221	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGGCCCAGTTGGATTT	9626	False	NA	NA	False	NA	NA	NA	6158970	6144256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_6144299_6144320_6144385_6146060_6146150_6158843
ENSMUSG00000046792.9_6145285_6158970_1	chr7	-	641	4	NNC	ENSMUSG00000046792.9	novel	576	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	65.7723346096214	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAACTCGAAGTTCATGC	9626	False	NA	-10	True	AATAAA	-16	NA	6158970	6145284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_6145619_6145705_6145797_6146060_6146150_6158843
ENSMUSG00000046792.9_6145401_6158970_1	chr7	-	525	4	NNC	ENSMUSG00000046792.9	novel	576	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	65.7723346096214	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTTCAGTGTTCCTTA	9626	False	NA	NA	False	AATAAA	-16	NA	6158970	6145400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_6145619_6145705_6145797_6146060_6146150_6158843
ENSMUSG00000046818.8_137329433_137332279_1	chr3	+	907	3	FSM	ENSMUSG00000046818.8	ENSMUST00000053855.8	2722	3	0	1815	0	344	multi-exon	FALSE	canonical	3	67	junction_2	6.5	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTTGTAGTTTGCCTGC	NA	False	NA	NA	False	AATAAA	-21	NA	137329432	137332279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_137329645_137329892_137330035_137331726
ENSMUSG00000046836.14_183059750_183078552_1	chr1	-	1612	14	FSM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	-16	1834	-16	-1118	multi-exon	FALSE	canonical	3	98	junction_3	13.1918030852137	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTTCTGGGCTCTGCT	NA	False	NA	NA	False	NA	NA	NA	183078552	183059749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078446
ENSMUSG00000046846.5_62179529_62189490_1	chr9	-	1524	2	FSM	ENSMUSG00000046846.5	ENSMUST00000056949.5	3042	2	0	1518	0	-1518	multi-exon	FALSE	canonical	3	9	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGTTTTTTTTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	62189490	62179528	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_62180846_62189283
ENSMUSG00000046862.15_143139542_143146049_1	chr4	+	1663	4	FSM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	-15	1612	0	-1612	multi-exon	FALSE	canonical	3	80	junction_1	39.6316371938716	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGCCACACACTGCTCA	NA	False	NA	NA	False	AATGAA	-39	NA	143139541	143146049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_143139662_143143209_143143523_143143942_143144531_143145407
ENSMUSG00000046862.15_143139542_143147661_1	chr4	+	3340	5	FSM	ENSMUSG00000046862.15	ENSMUST00000059790.11	3886	5	546	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	51.5866988670529	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTCACTTCCTTTG	NA	False	NA	10	True	AATAAA	-17	NA	143139541	143147661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_143139662_143141918_143141984_143143209_143143523_143143942_143144531_143145407
ENSMUSG00000046865.8_27869192_27878694_1	chr7	+	1134	9	NNC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	844.346936987397	3516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8588	False	NA	0	True	ATTAAA	-14	NA	27869191	27878694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878463_27878555
ENSMUSG00000046865.8_27869192_27878694_2	chr7	+	643	6	NNC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1078.23752485248	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8588	False	NA	0	True	ATTAAA	-14	NA	27869191	27878694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_27869244_27873928_27874025_27876603_27876701_27877629_27877743_27878322_27878469_27878555
ENSMUSG00000046865.8_27869192_27878694_3	chr7	+	637	6	NNC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1078.23752485248	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8588	False	NA	0	True	ATTAAA	-14	NA	27869191	27878694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_27869244_27873928_27874025_27876609_27876701_27877629_27877743_27878322_27878469_27878555
ENSMUSG00000046865.8_27869192_27878694_4	chr7	+	658	6	NNC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1078.23752485248	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8588	False	NA	0	True	ATTAAA	-14	NA	27869191	27878694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_27869244_27873928_27874046_27876609_27876701_27877629_27877743_27878322_27878469_27878555
ENSMUSG00000046873.19_156355823_156381659_1	chrX	-	783	5	FSM	ENSMUSG00000046873.19	ENSMUST00000139786.8	2379	5	-12	1608	-12	121	multi-exon	FALSE	canonical	3	154	junction_3	45.1386752131695	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTTATTTGAGTTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	156381659	156355822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ENSMUSG00000046909.10_80027504_80032979_1	chr11	-	1292	4	NNC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	126.117229415951	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCCTTCTTTGCTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	80032979	80027503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_80028106_80028743_80028894_80030691_80031150_80032897
ENSMUSG00000046909.10_80027504_80032979_2	chr11	-	1353	4	NNC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	123.047416334788	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCCTTCTTTGCTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	80032979	80027503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_80028106_80028743_80028894_80030625_80031150_80032902
ENSMUSG00000046909.10_80027504_80032979_3	chr11	-	1298	4	NNC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	125.158566093842	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCCTTCTTTGCTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	80032979	80027503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_80028106_80028732_80028894_80030691_80031150_80032902
ENSMUSG00000046909.10_80027504_80032979_4	chr11	-	1534	4	NIC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	108.206592528675	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCCTTCTTTGCTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	80032979	80027503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_80028106_80028743_80028894_80030691_80031397_80032902
ENSMUSG00000046942.18_78666837_78679188_1	chrX	-	1159	4	NNC	ENSMUSG00000046942.18	novel	1725	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	137.744530038603	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTCTCTTTTATTAC	NA	False	NA	0	True	AATAAA	-22	NA	78679188	78666836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_78667138_78667703_78668390_78671446_78671527_78679096
ENSMUSG00000046942.18_78666837_78679188_2	chrX	-	1922	4	NNC	ENSMUSG00000046942.18	novel	1725	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	145.164274760241	1251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTCTCTTTTATTAC	NA	False	NA	0	True	AATAAA	-22	NA	78679188	78666836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_78668390_78671446_78671527_78673369_78673567_78679096
ENSMUSG00000046949.17_34148734_34169630_1	chr13	+	982	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	64	2796	0	1	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTGCACTGTATTAGT	NA	False	NA	14	True	AATACA	-26	NA	34148733	34169630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ENSMUSG00000047022.19_57277232_57513855_1	chr12	+	1989	11	NIC	ENSMUSG00000047022.19	novel	2117	11	NA	NA	0	28	combination_of_known_splicesites	FALSE	canonical	3	14	junction_10	19.5642531163344	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGGTCGAATGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	57277231	57513855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738_57503970_57513241
ENSMUSG00000047030.16_167325477_167334794_1	chr2	-	1575	3	FSM	ENSMUSG00000047030.16	ENSMUST00000057627.16	4012	3	13	2424	-2	963	multi-exon	FALSE	canonical	3	52	junction_2	1	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCACAGCCACCTCCCG	4595	False	NA	NA	False	NA	NA	NA	167334794	167325476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_167326500_167327077_167327514_167334678
ENSMUSG00000047044.8_18690910_18695793_1	chr19	+	1325	2	FSM	ENSMUSG00000047044.8	ENSMUST00000062753.3	1677	2	353	-1	310	1	multi-exon	FALSE	canonical	3	347	junction_1	0	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTATCAGTGACTAAT	9667	False	NA	27	True	AATAAA	-20	NA	18690909	18695793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_18691024_18694582
ENSMUSG00000047098.19_55838496_55841128_1	chr14	+	822	7	ISM	ENSMUSG00000047098.19	ENSMUST00000133903.3	4939	15	8158	-1	-117	1	3prime_fragment	FALSE	canonical	3	183	junction_1	12.3749298538977	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTCTTGGTGGTCCTTCT	NA	False	NA	16	True	AATAAA	-19	NA	55838495	55841128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_+_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ENSMUSG00000047115.16_49344757_49366214_1	chr6	+	1387	7	FSM	ENSMUSG00000047115.16	ENSMUST00000060561.15	2730	7	84	1259	0	0	multi-exon	FALSE	canonical	3	30	junction_5	5.75663867972351	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGGGTCAGATTTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	49344756	49366214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49362306_49362390_49365750
ENSMUSG00000047126.18_86585481_86648346_1	chr11	-	6170	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	45	304	-19	0	multi-exon	FALSE	canonical	3	813	junction_25	122.673691341487	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTAGAATTGCAGTTT	NA	False	NA	-7	True	AATAAA	-19	NA	86648346	86585480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ENSMUSG00000047139.10_43455165_43459474_1	chr10	+	1029	2	FSM	ENSMUSG00000047139.10	ENSMUST00000058714.10	1816	2	0	787	0	351	multi-exon	FALSE	canonical	3	74	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGACATTTCCCATTGT	NA	False	NA	NA	False	AATAAA	-20	NA	43455164	43459474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_43455319_43458599
ENSMUSG00000047139.10_43455280_43460261_1	chr10	+	1701	2	FSM	ENSMUSG00000047139.10	ENSMUST00000058714.10	1816	2	115	0	115	0	multi-exon	FALSE	canonical	3	74	junction_1	0	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGTCTGTTGAATTTAT	NA	False	NA	10	True	AATAAA	-19	NA	43455279	43460261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_43455319_43458599
ENSMUSG00000047146.18_62715063_62728765_1	chr10	-	1142	2	FSM	ENSMUSG00000047146.18	ENSMUST00000227494.2	553	2	0	-589	0	589	multi-exon	FALSE	canonical	3	182	junction_1	0	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGAAGTTACCTCTCAGA	NA	False	NA	NA	False	NA	NA	NA	62728765	62715062	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62715913_62728473
ENSMUSG00000047153.5_56134740_56137668_2	chr14	+	1477	5	NIC	ENSMUSG00000047153.5	novel	5882	8	NA	NA	12266	1436	intron_retention	FALSE	non_canonical	0	0	junction_1	0	840	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGCTAGCACGCCTGCG	NA	False	NA	NA	False	NA	NA	NA	56134739	56137668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270
ENSMUSG00000047153.5_56134740_56137668_4	chr14	+	1198	6	NNC	ENSMUSG00000047153.5	novel	5882	8	NA	NA	12266	1436	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	764	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGCTAGCACGCCTGCG	NA	False	NA	NA	False	NA	NA	NA	56134739	56137668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_56135470_56135709_56135844_56136640_56136763_56137103_56137187_56137270_56137378_56137646
ENSMUSG00000047153.5_56134740_56137668_5	chr14	+	1299	6	NIC	ENSMUSG00000047153.5	novel	5882	8	NA	NA	12266	1436	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	758	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGCTAGCACGCCTGCG	NA	False	NA	NA	False	NA	NA	NA	56134739	56137668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_56135470_56135699_56135935_56136640_56136763_56137103_56137187_56137270_56137378_56137646
ENSMUSG00000047153.5_56134740_56137668_6	chr14	+	1125	5	NIC	ENSMUSG00000047153.5	novel	5882	8	NA	NA	12266	1436	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGCTAGCACGCCTGCG	NA	False	NA	NA	False	NA	NA	NA	56134739	56137668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_56135470_56135699_56135844_56136640_56136763_56137270_56137378_56137646
ENSMUSG00000047260.5_73067022_73067863_1	chr11	-	655	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	0	677	0	140	multi-exon	FALSE	canonical	3	946	junction_1	0	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCGTTCCTTGCTTAG	NA	False	NA	-22	True	ATTAAA	-13	NA	73067863	73067021	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_73067578_73067764
ENSMUSG00000047342.18_62670431_62680239_1	chr11	-	1784	6	FSM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	49	1218	-4	0	multi-exon	FALSE	canonical	3	31	junction_3	11.4262854856686	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGGGTGTGTCTGTGTG	NA	False	NA	-5	True	AATAGA	-16	NA	62680239	62670430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
ENSMUSG00000047369.18_181642900_181669926_1	chr1	+	3490	14	NNC	ENSMUSG00000047369.18	novel	1999	2	NA	NA	1877	26587	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2867	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCGGCCGCGCTCTCGC	NA	False	NA	NA	False	NA	NA	NA	181642899	181669926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653235_181656271_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ENSMUSG00000047369.18_181642900_181669926_2	chr1	+	3492	14	NIC	ENSMUSG00000047369.18	novel	1999	2	NA	NA	1877	26587	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2889	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCGGCCGCGCTCTCGC	NA	False	NA	NA	False	NA	NA	NA	181642899	181669926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ENSMUSG00000047369.18_181642921_181672852_1	chr1	+	3443	14	NNC	ENSMUSG00000047369.18	novel	1999	2	NA	NA	1898	29513	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2221	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGTATGACCCTGCTC	NA	False	NA	NA	False	NA	NA	NA	181642920	181672852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181672806
ENSMUSG00000047407.18_71151206_71158064_1	chr17	-	1487	3	FSM	ENSMUSG00000047407.18	ENSMUST00000059775.15	1631	3	138	6	0	0	multi-exon	FALSE	canonical	3	373	junction_2	253.5	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	78	True	AATAAA	-20	NA	71158064	71151205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_71152268_71153166_71153394_71157866
ENSMUSG00000047412.17_30942159_30981529_1	chr9	+	2992	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	217	5652	217	0	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGAACTTTTGTGTAAT	NA	False	NA	32	True	ATTAAA	-35	NA	30942158	30981529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ENSMUSG00000047412.17_30965207_30981845_1	chr9	+	2541	5	ISM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	23265	5336	-341	316	3prime_fragment	FALSE	canonical	3	240	junction_4	54.687178570484	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTACTTTTTATATTATA	NA	False	NA	NA	False	NA	NA	NA	30965206	30981845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ENSMUSG00000047459.15_155046932_155092192_1	chr2	+	694	5	NNC	ENSMUSG00000047459.15	novel	684	4	NA	NA	-31521	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	716.216796787118	4350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTGTTGTGTCTTTA	NA	False	NA	14	True	AGTAAA	-16	NA	155046931	155092192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_155046993_155078500_155078538_155084650_155084727_155089690_155089859_155091840
ENSMUSG00000047459.15_155046932_155092192_2	chr2	+	716	5	NNC	ENSMUSG00000047459.15	novel	684	4	NA	NA	-31521	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	716.216796787118	6401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTGTTGTGTCTTTA	NA	False	NA	14	True	AGTAAA	-16	NA	155046931	155092192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_155046993_155078478_155078538_155084650_155084727_155089690_155089859_155091840
ENSMUSG00000047459.15_155078453_155092192_1	chr2	+	764	4	NNC	ENSMUSG00000047459.15	novel	677	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	814.119292378102	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTGTTGTGTCTTTA	NA	False	NA	14	True	AGTAAA	-16	NA	155078452	155092192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_155078538_155084567_155084727_155089690_155089859_155091840
ENSMUSG00000047459.15_155078453_155092192_3	chr2	+	668	4	NNC	ENSMUSG00000047459.15	novel	677	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	753.592433318936	1727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTGTTGTGTCTTTA	NA	False	NA	14	True	AGTAAA	-16	NA	155078452	155092192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_155078538_155084650_155084714_155089690_155089859_155091840
ENSMUSG00000047459.15_155078453_155092192_4	chr2	+	681	4	NNC	ENSMUSG00000047459.15	novel	677	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	755.387906236848	2605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTGTTGTGTCTTTA	NA	False	NA	14	True	AGTAAA	-16	NA	155078452	155092192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_155078538_155084650_155084727_155089690_155089865_155091846
ENSMUSG00000047459.15_155078731_155092192_1	chr2	+	722	4	FSM	ENSMUSG00000047459.15	ENSMUST00000150602.2	788	4	203	-137	0	0	multi-exon	FALSE	canonical	2	4	junction_1	813.64788999228	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTGTTGTGTCTTTA	NA	False	NA	14	True	AGTAAA	-16	NA	155078730	155092192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_155078857_155084650_155084727_155089690_155089859_155091840
ENSMUSG00000047492.6_127185518_127187708_1	chr10	-	1955	2	FSM	ENSMUSG00000047492.6	ENSMUST00000059718.6	5319	2	2572	792	2572	-792	multi-exon	FALSE	canonical	3	17	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCAGAGAATTGTGTAAG	8018	False	NA	NA	False	AATAAA	-15	NA	127187708	127185517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_127186881_127187116
ENSMUSG00000047515.9_136790652_136805146_1	chr6	+	2654	12	NIC	ENSMUSG00000047515.9	novel	323	2	NA	NA	-13972	-5016	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	998	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCCAGCTCACGTCACTT	NA	False	NA	NA	False	NA	NA	NA	136790651	136805146	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ENSMUSG00000047515.9_136791543_136805146_1	chr6	+	1763	12	NIC	ENSMUSG00000047515.9	novel	323	2	NA	NA	-13081	-5016	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCCAGCTCACGTCACTT	NA	False	NA	NA	False	NA	NA	NA	136791542	136805146	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ENSMUSG00000047534.18_65179508_65219363_1	chr12	-	3400	13	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_12	86.8969296862029	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219363	65179507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
ENSMUSG00000047534.18_65180089_65219363_1	chr12	-	2819	13	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	9	-581	combination_of_known_junctions	FALSE	canonical	3	78	junction_12	86.8969296862029	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTTGAGAACATCCAAG	NA	False	NA	-13	True	ATTAAA	-15	NA	65219363	65180088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
ENSMUSG00000047547.15_54740758_54759157_1	chr13	-	1642	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	0	544	0	-544	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGCCTTAGAGCATC	7405	False	NA	NA	False	NA	NA	NA	54759157	54740757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
ENSMUSG00000047547.15_54741398_54759105_1	chr13	-	950	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	52	1184	0	0	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAGTATCCTCATTTC	7457	False	NA	-35	True	NA	NA	NA	54759105	54741397	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
ENSMUSG00000047583.10_154285482_154302732_1	chr3	-	942	5	FSM	ENSMUSG00000047583.10	ENSMUST00000170461.8	4270	5	3	3325	0	0	multi-exon	FALSE	canonical	3	5	junction_1	28.314086600136	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATGTCAAATAGGAAAAG	NA	False	NA	-15	True	AATAAA	-21	NA	154302732	154285481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_154285929_154296720_154296793_154299353_154299453_154300090_154300172_154302489
ENSMUSG00000047603.10_23833594_23836975_1	chr7	+	882	3	ISM	ENSMUSG00000047603.10	ENSMUST00000205680.2	1332	5	-27	3394	0	636	5prime_fragment	TRUE	canonical	3	44	junction_2	1	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGTGTGTGTGCATT	NA	False	NA	NA	False	AATAAA	-24	NA	23833593	23836975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_23833913_23834682_23834741_23836470
ENSMUSG00000047613.11_154041712_154046382_1	chr4	+	1073	4	FSM	ENSMUSG00000047613.11	ENSMUST00000147826.2	940	4	-11	-122	0	0	multi-exon	FALSE	canonical	3	119	junction_1	332.870345129551	2951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTTCACAAAAGTGT	NA	False	NA	NA	False	AATAAA	-29	NA	154041711	154046382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_154041780_154044212_154044320_154044987_154045450_154045946
ENSMUSG00000047613.11_154041712_154046382_2	chr4	+	1075	4	NNC	ENSMUSG00000047613.11	novel	1098	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	364.693783269684	2925	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTTCACAAAAGTGT	NA	False	NA	NA	False	AATAAA	-29	NA	154041711	154046382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_154041780_154044205_154044315_154044987_154045450_154045946
ENSMUSG00000047613.11_154041712_154046382_3	chr4	+	1577	3	ISM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	18	0	0	0	intron_retention	FALSE	canonical	3	743	junction_1	52	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTTCACAAAAGTGT	NA	False	NA	NA	False	AATAAA	-29	NA	154041711	154046382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_154041780_154044205_154044320_154044987
ENSMUSG00000047631.5_128098486_128106022_1	chr10	+	1332	3	NNC	ENSMUSG00000047631.5	novel	1258	2	NA	NA	-5380	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	2	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAGTATTTATCATTCA	1565	False	NA	NA	False	ATTAAA	-16	NA	128098485	128106022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_128098581_128104560_128104639_128104863
ENSMUSG00000047649.10_19079032_19090449_1	chr7	-	1041	10	NIC	ENSMUSG00000047649.10	novel	2239	3	NA	NA	2957	10907	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTCCGGCCGCTCTGGCC	5115	False	NA	NA	False	NA	NA	NA	19090449	19079031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088255_19088351_19089025_19089098_19089217_19089287_19090343
ENSMUSG00000047649.10_19079032_19090449_2	chr7	-	1040	10	NNC	ENSMUSG00000047649.10	novel	2239	3	NA	NA	2957	10907	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	915	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTCCGGCCGCTCTGGCC	5115	False	NA	NA	False	NA	NA	NA	19090449	19079031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_19079122_19079530_19079643_19082331_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
ENSMUSG00000047649.10_19087244_19093408_1	chr7	-	455	3	NNC	ENSMUSG00000047649.10	novel	489	2	NA	NA	0	2695	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	107	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACGATTTCACAGGCCTT	2156	False	NA	NA	False	NA	NA	NA	19093408	19087243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_19087461_19093014_19093157_19093312
ENSMUSG00000047649.10_19089939_19093408_1	chr7	-	2215	4	NNC	ENSMUSG00000047649.10	novel	2239	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.490987293304	788	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAATGTCTTACTTTTG	2156	False	NA	-19	True	NA	NA	NA	19093408	19089938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_19090086_19090111_19091942_19093014_19093157_19093312
ENSMUSG00000047654.7_70346830_70355784_1	chr8	+	548	4	Genic_Genomic	ENSMUSG00000047654.7	novel	1335	1	NA	NA	-8004	-384	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2707	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTTCTCGCTGTTCCCGC	NA	False	NA	NA	False	NA	NA	NA	70346829	70355784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_70347061_70347153_70347226_70347891_70347971_70355618
ENSMUSG00000047656.10_6973540_6976412_1	chr19	+	1022	8	NNC	ENSMUSG00000047656.10	novel	1103	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	12.4654624904991	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTTGTGGTTCCTCATC	NA	False	NA	36	True	ATTAAA	-42	NA	6973539	6976412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_6973745_6973823_6973893_6974063_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976025_6976137_6976259
ENSMUSG00000047675.16_117011031_117013281_1	chr4	-	694	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	159	7	0	0	multi-exon	FALSE	canonical	3	8358	junction_5	1894.95893359197	176617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTAGGTGTTTGGAG	NA	False	NA	-20	True	AATAAA	-23	NA	117013281	117011030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
ENSMUSG00000047694.13_97981813_97988737_1	chrX	+	879	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	446	3886	0	0	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGATATTTGCAAGGCT	NA	False	NA	26	True	ATTAAA	-36	NA	97981812	97988737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ENSMUSG00000047694.13_97981813_97991748_1	chrX	+	3890	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	446	875	0	-875	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCCTTTCAAGGTGTAC	NA	False	NA	8	True	TTTAAA	-45	NA	97981812	97991748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ENSMUSG00000047710.9_13919704_13929512_1	chr8	+	1823	2	FSM	ENSMUSG00000047710.9	ENSMUST00000051870.8	4013	2	63	2127	0	-2127	multi-exon	FALSE	canonical	3	209	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTCTCAGACGCCCAG	NA	False	NA	NA	False	NA	NA	NA	13919703	13929512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_13919812_13927797
ENSMUSG00000047710.9_13919704_13930569_1	chr8	+	2880	2	FSM	ENSMUSG00000047710.9	ENSMUST00000051870.8	4013	2	63	1070	0	-1070	multi-exon	FALSE	canonical	3	209	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGTCTTTGTCCTCCAC	NA	False	NA	NA	False	AATAAA	-20	NA	13919703	13930569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_13919812_13927797
ENSMUSG00000047719.3_148518952_148529218_1	chr4	-	2467	3	NNC	ENSMUSG00000047719.3	novel	576	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	31.5	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGGCTTTGTTTCTT	NA	False	NA	0	True	ATTAAA	-16	NA	148529218	148518951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_148521100_148528384_148528587_148529101
ENSMUSG00000047719.3_148519057_148529218_2	chr4	-	2877	2	FSM	ENSMUSG00000047719.3	ENSMUST00000051633.3	2992	2	10	105	0	-105	multi-exon	FALSE	canonical	3	93	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGTGCCACATTTTGT	NA	False	NA	-105	True	TTTAAA	-33	NA	148529218	148519056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148521100_148528384
ENSMUSG00000047733.11_6130795_6134957_1	chr19	+	1337	8	NIC	ENSMUSG00000047733.11	novel	545	3	NA	NA	732	4139	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	593	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCGGGTGCGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	6130794	6134957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134824
ENSMUSG00000047751.10_139523702_139525025_1	chr7	+	1219	2	NNC	ENSMUSG00000047751.10	novel	1227	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTGAATGAATTCGGAC	NA	False	NA	NA	False	AATAAA	-20	NA	139523701	139525025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_139524343_139524447
ENSMUSG00000047757.18_163763708_163780266_1	chrX	+	2834	9	FSM	ENSMUSG00000047757.18	ENSMUST00000167446.8	2953	9	120	-1	0	1	multi-exon	FALSE	canonical	3	98	junction_5	7.72981241687015	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGTTTTCTTTTACT	NA	False	NA	NA	False	ATTAAA	-18	NA	163763707	163780266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
ENSMUSG00000047804.16_61762498_61821041_1	chr11	-	3472	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	37	365	-8	0	multi-exon	FALSE	canonical	3	123	junction_4	17.9790127081323	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAACTTCCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	61821041	61762497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
ENSMUSG00000047821.17_62711266_62732140_1	chr11	+	2075	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	209	1622	0	-143	multi-exon	FALSE	canonical	3	37	junction_4	2.33238075793812	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCGTTTGGAGTGCTTT	NA	False	NA	26	True	AATAAA	-36	NA	62711265	62732140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
ENSMUSG00000047832.10_112783849_112792798_1	chr12	-	2214	2	FSM	ENSMUSG00000047832.10	ENSMUST00000062092.7	2425	2	211	0	196	0	multi-exon	FALSE	canonical	3	30	junction_1	0	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGGAGCCTTTTTTT	9857	False	NA	0	True	ATTAAA	-19	NA	112792798	112783848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_112785733_112792468
ENSMUSG00000047832.10_112783857_112792659_1	chr12	-	2067	2	FSM	ENSMUSG00000047832.10	ENSMUST00000062092.7	2425	2	350	8	335	0	multi-exon	FALSE	canonical	3	30	junction_1	0	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAATGTGTTAGGAGC	9996	False	NA	-8	True	ATTAAA	-11	NA	112792659	112783856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_112785733_112792468
ENSMUSG00000047832.10_112783857_112792700_1	chr12	-	2108	2	FSM	ENSMUSG00000047832.10	ENSMUST00000062092.7	2425	2	309	8	294	0	multi-exon	FALSE	canonical	3	30	junction_1	0	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAATGTGTTAGGAGC	9955	False	NA	-8	True	ATTAAA	-11	NA	112792700	112783856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_112785733_112792468
ENSMUSG00000047878.14_83110923_83135932_1	chr15	-	2132	3	FSM	ENSMUSG00000047878.14	ENSMUST00000164614.3	1974	3	0	-158	0	0	multi-exon	FALSE	canonical	3	30	junction_2	34	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCCTCATGGTCACA	2266	False	NA	-8	True	AATAAA	-16	NA	83135932	83110922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83112796_83114714_83114859_83135817
ENSMUSG00000047878.14_83111081_83135932_1	chr15	-	1891	3	FSM	ENSMUSG00000047878.14	ENSMUST00000049530.14	2092	3	43	158	0	0	multi-exon	FALSE	canonical	3	57	junction_2	20.5	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGGCTTTTTTTTTT	2266	False	NA	NA	False	NA	NA	NA	83135932	83111080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83112796_83114714_83114859_83135900
ENSMUSG00000047879.18_9958180_9993725_1	chr18	-	2096	21	NIC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	6807	34886	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCACTGCACTGCGGC	NA	False	NA	NA	False	NA	NA	NA	9993725	9958179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUSG00000047879.18_9958180_9993725_2	chr18	-	1981	20	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	6807	34886	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCACTGCACTGCGGC	NA	False	NA	NA	False	NA	NA	NA	9993725	9958179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987669_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUSG00000047879.18_9995594_10030141_1	chr18	-	1857	17	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	213.072015041277	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACACTTGATTATACACT	-60	True	NA	-65	True	AATAAA	-15	NA	10030141	9995593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_9995730_9996070_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ENSMUSG00000047945.7_129407374_129409778_1	chr4	+	731	2	NNC	ENSMUSG00000047945.7	novel	1605	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTGGTCTTCTGGGGT	NA	False	NA	24	True	AATAAA	-24	NA	129407373	129409778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_129407451_129409124
ENSMUSG00000047945.7_129407599_129409778_1	chr4	+	1380	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	225	0	225	0	multi-exon	FALSE	canonical	3	8029	junction_1	0	3636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTGGTCTTCTGGGGT	NA	False	NA	24	True	AATAAA	-24	NA	129407598	129409778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129407710_129408509
ENSMUSG00000047986.13_84756923_84769176_1	chr8	+	2622	14	NIC	ENSMUSG00000047986.13	novel	2452	7	NA	NA	4219	12252	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGACACCACCAGGCTTG	NA	False	NA	NA	False	NA	NA	NA	84756922	84769176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_84757822_84757941_84758051_84758147_84758239_84758645_84758772_84760579_84760739_84760820_84760923_84762713_84762903_84762991_84763176_84765924_84765999_84766106_84766264_84767302_84767461_84767560_84767719_84768715_84768834_84769078
ENSMUSG00000047989.12_24239431_24254912_1	chr18	-	783	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	98	1617	-20	0	multi-exon	FALSE	canonical	3	634	junction_3	55.0789206502814	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTGCTTTCTTCCCCTC	NA	False	NA	-124	True	NA	NA	NA	24254912	24239430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
ENSMUSG00000048000.16_87254751_87283445_1	chr1	+	955	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174583.8	3015	4	-1	2061	0	1	multi-exon	FALSE	canonical	3	38	junction_3	78.7922726047562	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATAGTTTCATTGTATG	NA	False	NA	NA	False	AATAAA	-16	NA	87254750	87283445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282702
ENSMUSG00000048000.16_87254751_87283939_1	chr1	+	1449	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174583.8	3015	4	-1	1567	0	495	multi-exon	FALSE	canonical	3	38	junction_3	78.7922726047562	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTTCTTTTTTGTTTCC	NA	False	NA	NA	False	AGTAAA	-32	NA	87254750	87283939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282702
ENSMUSG00000048007.5_133438005_133442390_1	chrX	-	1197	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	224	0	224	0	multi-exon	FALSE	canonical	3	1175	junction_1	0	5987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGACGAAGAGGCTTT	NA	False	NA	-10	True	AATAAA	-16	NA	133442390	133438004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_133439017_133442205
ENSMUSG00000048007.5_133438005_133442390_2	chrX	-	1194	2	NNC	ENSMUSG00000048007.5	novel	1421	2	NA	NA	224	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	4676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGACGAAGAGGCTTT	NA	False	NA	-10	True	AATAAA	-16	NA	133442390	133438004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_133439014_133442205
ENSMUSG00000048007.5_133438541_133442390_1	chrX	-	661	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	224	536	224	-536	multi-exon	FALSE	canonical	3	1175	junction_1	0	2493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTCTAGAATTTGATA	NA	False	NA	NA	False	TATAAA	-19	NA	133442390	133438540	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_133439017_133442205
ENSMUSG00000048007.5_133438693_133442390_2	chrX	-	509	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	224	688	224	-688	multi-exon	FALSE	canonical	3	1175	junction_1	0	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGAGTCATGTGTATTT	NA	False	NA	NA	False	AATGAA	-26	NA	133442390	133438692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_133439017_133442205
ENSMUSG00000048039.9_87837847_87847993_1	chr3	+	2667	4	FSM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	226	0	226	0	multi-exon	FALSE	canonical	3	350	junction_2	9.0921211313239	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGTGTATGTGTGTGC	NA	False	NA	31	True	NA	NA	NA	87837846	87847993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_87837919_87838637_87839583_87845880_87846082_87846544
ENSMUSG00000048065.9_107349172_107357212_1	chr7	-	1312	10	NNC	ENSMUSG00000048065.9	novel	1178	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	9.77651506998175	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAATGTGTGGATAT	NA	False	NA	-5	True	AATAAA	-19	NA	107357212	107349171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_107349604_107350373_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356786_107356912_107357164
ENSMUSG00000048065.9_107349172_107357212_2	chr7	-	2082	9	NNC	ENSMUSG00000048065.9	novel	1178	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	29	junction_7	8.01171017948103	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAATGTGTGGATAT	NA	False	NA	-5	True	AATAAA	-19	NA	107357212	107349171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356786_107356912_107357164
ENSMUSG00000048065.9_107349172_107357212_3	chr7	-	1280	10	NNC	ENSMUSG00000048065.9	novel	1178	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_8	11.9484489411289	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAATGTGTGGATAT	NA	False	NA	-5	True	AATAAA	-19	NA	107357212	107349171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_107349604_107350373_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356818_107356912_107357164
ENSMUSG00000048076.15_59102965_59119042_1	chr11	-	1021	5	FSM	ENSMUSG00000048076.15	ENSMUST00000061242.8	1800	5	54	725	54	-725	multi-exon	FALSE	canonical	3	1704	junction_4	263.796678333902	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTTAAAAATACAGGACAA	1901	False	NA	5	True	TTTAAA	-3	NA	59119042	59102964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
ENSMUSG00000048100.14_108479015_108489385_2	chr3	+	1294	4	FSM	ENSMUSG00000048100.14	ENSMUST00000131814.8	596	4	1	-699	0	0	multi-exon	FALSE	canonical	3	6	junction_1	77.7988860245869	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTGAGTTTGTGTTTGC	NA	False	NA	14	True	AATAAA	-23	NA	108479014	108489385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_108479069_108480195_108480275_108485431_108485530_108488322
ENSMUSG00000048175.14_98032518_98043540_1	chr15	-	2130	4	FSM	ENSMUSG00000048175.14	ENSMUST00000123626.8	1100	4	47	-1077	0	0	multi-exon	FALSE	canonical	3	84	junction_3	16.7531091641721	548	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCACTTCCAGTTTCT	NA	False	NA	0	True	AATAAA	-21	NA	98043540	98032517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98034320_98039164_98039270_98040531_98040696_98043481
ENSMUSG00000048200.13_141045007_141046526_1	chr7	+	1070	4	ISM	ENSMUSG00000048200.13	ENSMUST00000053670.12	1698	10	4000	0	0	0	3prime_fragment	FALSE	canonical	3	11	junction_3	1.63299316185545	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGGCTCTTGTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	141045006	141046526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_141045270_141045431_141045599_141045678_141045751_141045958
ENSMUSG00000048222.4_121291440_121304548_1	chr2	-	2522	8	NNC	ENSMUSG00000048222.4	novel	3362	7	NA	NA	0	-724	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	161.938259839977	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGCAGTTCTTGAAGTT	9195	False	NA	-7	True	AATAAA	-15	NA	121304548	121291439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_121291448_121291563_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
ENSMUSG00000048222.4_121291440_121304548_2	chr2	-	2638	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	0	724	0	-724	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGCAGTTCTTGAAGTT	9195	False	NA	-7	True	AATAAA	-15	NA	121304548	121291439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
ENSMUSG00000048222.4_121291640_121304548_1	chr2	-	2438	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	0	924	0	-924	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGGCCTATTTTTTAT	9195	False	NA	-12	True	AGTAAA	-6	NA	121304548	121291639	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
ENSMUSG00000048222.4_121292145_121304548_1	chr2	-	1933	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	0	1429	0	-1429	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTGTGTGTGTGTAAG	9195	False	NA	NA	False	TATAAA	-15	NA	121304548	121292144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
ENSMUSG00000048277.16_117700494_117704558_1	chr11	+	969	4	FSM	ENSMUSG00000048277.16	ENSMUST00000026649.14	1520	4	0	551	0	0	multi-exon	FALSE	canonical	3	588	junction_1	45.536310297998	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAGTACTGTAGATAGG	NA	False	NA	NA	False	NA	NA	NA	117700493	117704558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_117700630_117703284_117703523_117703871_117704012_117704103
ENSMUSG00000048285.10_70872288_70946546_1	chr12	+	2176	14	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	0	-234	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	34.6862522431374	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTTCTTTATAGTAT	787	False	NA	NA	False	NA	NA	NA	70872287	70946546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ENSMUSG00000048285.10_70872288_70949008_1	chr12	+	4638	14	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	34.6862522431374	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTCTTGTTATTATAC	787	False	NA	NA	False	AATAAA	-21	NA	70872287	70949008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ENSMUSG00000048327.7_129127085_129139132_1	chr2	-	1163	4	ISM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	0	16955	0	-16955	5prime_fragment	FALSE	canonical	3	312	junction_1	5.79271573232759	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCGTTCTGCAAAAATCAAG	NA	False	NA	NA	False	NA	NA	NA	129139132	129127084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_129128021_129132877_129132930_129138233_129138301_129139024
ENSMUSG00000048351.15_108185375_108195925_1	chr4	+	749	4	NNC	ENSMUSG00000048351.15	novel	341	4	NA	NA	0	45	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_3	213.186928930145	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGAAGACACCTACGT	NA	False	NA	34	True	AGTAAA	-17	NA	108185374	108195925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_108185488_108189407_108189549_108195319_108195439_108195549
ENSMUSG00000048371.9_105318083_105322220_1	chr8	+	2233	3	NNC	ENSMUSG00000048371.9	novel	5692	2	NA	NA	0	-3438	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	34.5	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCTAGTGTCTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	105318082	105322220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_105318228_105320111_105321962_105321982
ENSMUSG00000048371.9_105318083_105322220_2	chr8	+	2254	2	FSM	ENSMUSG00000048371.9	ENSMUST00000059588.8	5692	2	0	3438	0	-3438	multi-exon	FALSE	canonical	3	69	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCTAGTGTCTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	105318082	105322220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_105318228_105320111
ENSMUSG00000048371.9_105318083_105322726_1	chr8	+	2760	2	FSM	ENSMUSG00000048371.9	ENSMUST00000059588.8	5692	2	0	2932	0	-2932	multi-exon	FALSE	canonical	3	69	junction_1	0	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCCCCGTGACACAACC	NA	False	NA	NA	False	NA	NA	NA	105318082	105322726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_105318228_105320111
ENSMUSG00000048402.15_118763428_118768211_1	chr1	-	2708	2	ISM	ENSMUSG00000048402.15	ENSMUST00000062483.15	6637	14	213138	1566	142107	-1566	3prime_fragment	FALSE	canonical	3	112	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTAGGCCTGAGAGGGGT	NA	False	NA	NA	False	NA	NA	NA	118768211	118763427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_118765908_118767983
ENSMUSG00000048402.15_118765107_118981135_1	chr1	-	3178	14	FSM	ENSMUSG00000048402.15	ENSMUST00000062483.15	6637	14	214	3245	-66	-3245	multi-exon	FALSE	canonical	3	89	junction_11	11.3908506833309	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGCATCAATGAGAACGTG	1443	False	NA	NA	False	NA	NA	NA	118981135	118765106	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118981031
ENSMUSG00000048402.15_118765107_118981349_1	chr1	-	3392	14	FSM	ENSMUSG00000048402.15	ENSMUST00000062483.15	6637	14	0	3245	0	-3245	multi-exon	FALSE	canonical	3	89	junction_11	11.3908506833309	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGCATCAATGAGAACGTG	1229	False	NA	NA	False	NA	NA	NA	118981349	118765106	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118981031
ENSMUSG00000048402.15_118765107_118981435_1	chr1	-	3478	14	FSM	ENSMUSG00000048402.15	ENSMUST00000062483.15	6637	14	-86	3245	-86	-3245	multi-exon	FALSE	canonical	3	89	junction_11	11.3908506833309	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGCATCAATGAGAACGTG	1143	False	NA	NA	False	NA	NA	NA	118981435	118765106	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118981031
ENSMUSG00000048445.7_120717355_120753840_1	chr11	-	828	4	NNC	ENSMUSG00000048445.7	novel	3403	19	NA	NA	10657	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	6.59966329107444	232	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTGTCTTGTCCTACT	NA	False	NA	2	True	ATTAAA	-28	NA	120753840	120717354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_120717751_120751226_120751453_120751963_120752096_120753766
ENSMUSG00000048485.13_129320062_129334613_1	chr4	-	2786	4	FSM	ENSMUSG00000048485.13	ENSMUST00000053042.6	3288	4	-2	504	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.09120616516523	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTGCTTGTATTTTG	737	False	NA	0	True	ATTAAA	-15	NA	129334613	129320061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_129321621_129322220_129322400_129326103_129327105_129334566
ENSMUSG00000048495.17_57427399_57445630_1	chr1	-	1214	8	FSM	ENSMUSG00000048495.17	ENSMUST00000162686.8	1847	8	630	3	0	0	multi-exon	FALSE	canonical	3	47	junction_6	29.7341966257639	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATTGGTGGAGTGGCCG	NA	False	NA	-18	True	AATAAA	-43	NA	57445630	57427398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440527_57440683_57445542
ENSMUSG00000048497.12_62539490_62557180_1	chr11	+	1878	2	FSM	ENSMUSG00000048497.12	ENSMUST00000155759.3	589	2	-171	-1118	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGTCTGTGTCTGGTT	NA	False	NA	2	True	NA	NA	NA	62539489	62557180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_62539683_62555495
ENSMUSG00000048497.12_62539490_62557180_2	chr11	+	1370	3	NNC	ENSMUSG00000048497.12	novel	589	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	1.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGTCTGTGTCTGGTT	NA	False	NA	2	True	NA	NA	NA	62539489	62557180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_62539683_62555495_62556062_62556569
ENSMUSG00000048497.12_62539643_62557180_1	chr11	+	1217	3	NNC	ENSMUSG00000048497.12	novel	366	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	1.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGTCTGTGTCTGGTT	NA	False	NA	2	True	NA	NA	NA	62539642	62557180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_62539683_62555495_62556062_62556569
ENSMUSG00000048497.12_62539643_62557180_2	chr11	+	1725	2	FSM	ENSMUSG00000048497.12	ENSMUST00000155759.3	589	2	-18	-1118	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGTCTGTGTCTGGTT	NA	False	NA	2	True	NA	NA	NA	62539642	62557180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_62539683_62555495
ENSMUSG00000048503.8_43021769_43027847_1	chr9	-	1661	3	FSM	ENSMUSG00000048503.8	ENSMUST00000061833.6	3503	3	18	1824	-8	-735	multi-exon	FALSE	canonical	3	19	junction_1	3	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGGCATAAGCCATAG	NA	False	NA	NA	False	NA	NA	NA	43027847	43021768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_43023154_43024755_43024956_43027771
ENSMUSG00000048550.18_21210550_21218546_1	chr2	+	2610	3	FSM	ENSMUSG00000048550.18	ENSMUST00000054591.10	3899	3	15	1274	0	456	multi-exon	FALSE	canonical	3	53	junction_1	4.5	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATTTGCTTTATTTTAT	4799	False	NA	17	True	AATAAA	-26	NA	21210549	21218546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_21210657_21214695_21214853_21216200
ENSMUSG00000048603.9_98446404_98453274_1	chr13	+	890	6	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6526	-538	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2536	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCGTCCCCTCCCTGCCTC	NA	False	NA	NA	False	NA	NA	NA	98446403	98453274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453132
ENSMUSG00000048603.9_98446404_98453488_1	chr13	+	848	6	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6526	-324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCGGAAGTAACGCGA	NA	False	NA	NA	False	NA	NA	NA	98446403	98453488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446710_98447488_98447531_98449599_98449802_98450146_98450261_98452737_98452807_98453373
ENSMUSG00000048603.9_98446404_98453488_10	chr13	+	1104	6	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6526	-324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2690	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCGGAAGTAACGCGA	NA	False	NA	NA	False	NA	NA	NA	98446403	98453488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453132
ENSMUSG00000048603.9_98446404_98453488_11	chr13	+	845	6	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6526	-324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCGGAAGTAACGCGA	NA	False	NA	NA	False	NA	NA	NA	98446403	98453488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452755_98452807_98453373
ENSMUSG00000048603.9_98446404_98453488_12	chr13	+	852	6	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6526	-324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCGGAAGTAACGCGA	NA	False	NA	NA	False	NA	NA	NA	98446403	98453488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446710_98447488_98447531_98449595_98449802_98450146_98450261_98452737_98452807_98453373
ENSMUSG00000048603.9_98446404_98453488_13	chr13	+	855	6	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6526	-324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17439	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCGGAAGTAACGCGA	NA	False	NA	NA	False	NA	NA	NA	98446403	98453488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452745_98452807_98453373
ENSMUSG00000048603.9_98446404_98453488_14	chr13	+	852	6	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6526	-324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29738	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCGGAAGTAACGCGA	NA	False	NA	NA	False	NA	NA	NA	98446403	98453488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446699_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453373
ENSMUSG00000048603.9_98446404_98453488_2	chr13	+	754	6	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6526	-324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	917	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCGGAAGTAACGCGA	NA	False	NA	NA	False	NA	NA	NA	98446403	98453488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446710_98447488_98447531_98449693_98449802_98450146_98450261_98452737_98452807_98453373
ENSMUSG00000048603.9_98446404_98453488_3	chr13	+	872	6	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6526	-324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	43195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCGGAAGTAACGCGA	NA	False	NA	NA	False	NA	NA	NA	98446403	98453488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446710_98447488_98447546_98449599_98449802_98450146_98450270_98452737_98452807_98453373
ENSMUSG00000048603.9_98446404_98453488_4	chr13	+	858	6	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6526	-324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37958	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCGGAAGTAACGCGA	NA	False	NA	NA	False	NA	NA	NA	98446403	98453488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453378
ENSMUSG00000048603.9_98446404_98453488_5	chr13	+	768	6	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6526	-324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1044	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCGGAAGTAACGCGA	NA	False	NA	NA	False	NA	NA	NA	98446403	98453488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446710_98447488_98447546_98449694_98449802_98450146_98450261_98452737_98452807_98453373
ENSMUSG00000048603.9_98446404_98453488_6	chr13	+	809	6	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6526	-324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1626	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCGGAAGTAACGCGA	NA	False	NA	NA	False	NA	NA	NA	98446403	98453488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446710_98447488_98447546_98449653_98449802_98450146_98450261_98452737_98452807_98453373
ENSMUSG00000048603.9_98446404_98453488_7	chr13	+	806	5	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6526	-324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	927	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCGGAAGTAACGCGA	NA	False	NA	NA	False	NA	NA	NA	98446403	98453488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446710_98449599_98449802_98450146_98450261_98452737_98452807_98453373
ENSMUSG00000048603.9_98446404_98453488_8	chr13	+	772	6	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6526	-324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	943	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCGGAAGTAACGCGA	NA	False	NA	NA	False	NA	NA	NA	98446403	98453488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446710_98447488_98447546_98449599_98449711_98450146_98450261_98452737_98452807_98453373
ENSMUSG00000048603.9_98446404_98453488_9	chr13	+	858	6	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6526	-324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCGGAAGTAACGCGA	NA	False	NA	NA	False	NA	NA	NA	98446403	98453488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446710_98447488_98447546_98449599_98449780_98450129_98450261_98452737_98452807_98453373
ENSMUSG00000048603.9_98446450_98453274_1	chr13	+	844	6	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6480	-538	multi-exon	FALSE	non_canonical	0	0	junction_1	0	712	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCGTCCCCTCCCTGCCTC	NA	False	NA	NA	False	NA	NA	NA	98446449	98453274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453132
ENSMUSG00000048603.9_98446450_98453488_1	chr13	+	809	6	Genic_Genomic	ENSMUSG00000048603.9	novel	883	1	NA	NA	-6480	-324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1274	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCGGAAGTAACGCGA	NA	False	NA	NA	False	NA	NA	NA	98446449	98453488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452745_98452807_98453373
ENSMUSG00000048603.9_98453577_98453812_1	chr13	+	200	2	NNC	ENSMUSG00000048603.9	novel	1446	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_1	0	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGCTAATGTTGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	98453576	98453812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_98453628_98453663
ENSMUSG00000048731.16_27238784_27247552_1	chr17	+	1951	6	Genic_Genomic	ENSMUSG00000048731.16	novel	451	2	NA	NA	1748	-89	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTCGCGACTTTGTGAC	NA	False	NA	NA	False	NA	NA	NA	27238783	27247552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_+_27240010_27240145_27240322_27241412_27241557_27241715_27241852_27244766_27244868_27247384
ENSMUSG00000048758.15_106306653_106308707_1	chr9	+	667	4	FSM	ENSMUSG00000048758.15	ENSMUST00000098994.7	583	4	-84	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2179.51131117862	5594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGATGACCAGTGTC	NA	False	NA	-57	True	NA	NA	NA	106306652	106308707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_106306776_106307174_106307214_106307506_106307572_106308267
ENSMUSG00000048758.15_106306738_106308767_1	chr9	+	636	4	NNC	ENSMUSG00000048758.15	novel	733	4	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	1620.84669231855	83079	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	3	True	AATAAA	-19	NA	106306737	106308767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_106306776_106307168_106307214_106307506_106307572_106308279
ENSMUSG00000048758.15_106306738_106308767_2	chr9	+	885	4	FSM	ENSMUSG00000048758.15	ENSMUST00000217081.2	466	4	-23	-396	0	0	multi-exon	FALSE	canonical	3	58	junction_1	2158.78427721613	73211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	3	True	AATAAA	-19	NA	106306737	106308767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_106307013_106307168_106307214_106307506_106307572_106308267
ENSMUSG00000048758.15_106306738_106308767_3	chr9	+	1041	3	FSM	ENSMUSG00000048758.15	ENSMUST00000213448.2	845	3	-16	-180	0	0	multi-exon	FALSE	canonical	3	3966	junction_1	565.5	73649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	3	True	AATAAA	-19	NA	106306737	106308767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_106307214_106307506_106307572_106308267
ENSMUSG00000048827.13_110397957_110419879_1	chr8	+	2291	10	NIC	ENSMUSG00000048827.13	novel	2450	16	NA	NA	23840	18861	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGACTCCCTCGACCTCC	NA	False	NA	NA	False	NA	NA	NA	110397956	110419879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ENSMUSG00000048874.16_30869645_30912695_1	chr1	-	1464	4	ISM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-33	28225	-33	641	5prime_fragment	FALSE	canonical	3	122	junction_2	3.09120616516523	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAAAATCTGTAACTCAT	NA	False	NA	NA	False	CATAAA	-9	NA	30912695	30869644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_30870641_30876185_30876348_30902067_30902337_30912658
ENSMUSG00000048897.16_79674582_79736599_1	chr7	+	2255	4	ISM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	0	4979	0	5	5prime_fragment	TRUE	canonical	3	198	junction_1	67.6214955961983	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTGAGTGCTGTGTAAC	NA	False	NA	6	True	AATAAA	-14	NA	79674581	79736599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181
ENSMUSG00000048897.16_79674582_79741676_1	chr7	+	3606	5	FSM	ENSMUSG00000048897.16	ENSMUST00000164056.9	5871	5	20	2245	0	98	multi-exon	FALSE	canonical	3	72	junction_4	112.192635676322	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCACAAATCCCAAGGCC	NA	False	NA	NA	False	NA	NA	NA	79674581	79741676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181_79736357_79740082
ENSMUSG00000048897.16_79674582_79742497_1	chr7	+	4427	5	FSM	ENSMUSG00000048897.16	ENSMUST00000164056.9	5871	5	20	1424	0	0	multi-exon	FALSE	canonical	3	72	junction_4	112.192635676322	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTGTACGTGCTTCTT	NA	False	NA	18	True	AATAAA	-18	NA	79674581	79742497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181_79736357_79740082
ENSMUSG00000048922.19_67914165_67953059_1	chr14	-	3215	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	0	-361	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	124.651514230674	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAAATACATTAATTTCT	NA	False	NA	-13	True	AATAAA	-27	NA	67953059	67914164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ENSMUSG00000048930.13_113343616_113354347_1	chr6	-	1721	9	FSM	ENSMUSG00000048930.13	ENSMUST00000032410.14	2848	9	497	630	-10	0	multi-exon	FALSE	canonical	3	225	junction_8	58.2875415504892	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAAAAAAACCACCCGC	NA	False	NA	18	True	AATAAA	-36	NA	113354347	113343615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
ENSMUSG00000048930.13_113343616_113354347_2	chr6	-	1775	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	134	junction_9	97.0713114476818	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAAAAAAACCACCCGC	NA	False	NA	18	True	AATAAA	-36	NA	113354347	113343615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
ENSMUSG00000048930.13_113343616_113354478_1	chr6	-	1852	9	FSM	ENSMUSG00000048930.13	ENSMUST00000032410.14	2848	9	366	630	0	0	multi-exon	FALSE	canonical	3	225	junction_8	58.2875415504892	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAAAAAAACCACCCGC	NA	False	NA	18	True	AATAAA	-36	NA	113354478	113343615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
ENSMUSG00000048930.13_113343616_113354478_2	chr6	-	1906	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	134	junction_9	97.0713114476818	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAAAAAAACCACCCGC	NA	False	NA	18	True	AATAAA	-36	NA	113354478	113343615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
ENSMUSG00000048930.13_113343616_113354844_1	chr6	-	2272	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	134	junction_9	97.0713114476818	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAAAAAAACCACCCGC	NA	False	NA	18	True	AATAAA	-36	NA	113354844	113343615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
ENSMUSG00000048970.10_37719774_37723964_1	chrX	-	1337	2	FSM	ENSMUSG00000048970.10	ENSMUST00000058265.8	1449	2	0	112	0	-112	multi-exon	FALSE	canonical	3	94	junction_1	0	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTGTATCTTTGCTT	NA	False	NA	-114	True	GATAAA	-23	NA	37723964	37719773	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_37721001_37723854
ENSMUSG00000049038.4_84955297_84963859_1	chr10	-	1514	3	FSM	ENSMUSG00000049038.4	ENSMUST00000214193.2	337	3	0	-1177	0	0	multi-exon	FALSE	canonical	2	4	junction_2	23	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTATTCCAAAACATCAT	NA	False	NA	2	True	AATAAA	-23	NA	84963859	84955296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_84956679_84962231_84962330_84963825
ENSMUSG00000049119.15_5644190_5800047_1	chr4	+	2087	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	69	1054	0	101	multi-exon	FALSE	canonical	3	35	junction_1	17	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGTTGAGAGCAGAAT	17	True	NA	3	True	ATTAAA	-17	NA	5644189	5800047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_5644411_5729570_5729658_5798268
ENSMUSG00000049232.4_59185855_59186486_1	chr6	+	475	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	0	2532	0	-2532	multi-exon	FALSE	canonical	3	130	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGACATCACTTGTCC	NA	False	NA	27	True	AATGAA	-21	NA	59185854	59186486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_59186167_59186323
ENSMUSG00000049232.4_59185855_59188808_1	chr6	+	2797	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	0	210	0	-210	multi-exon	FALSE	canonical	3	130	junction_1	0	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGTTTTGGATTACTT	NA	False	NA	12	True	AATAAA	-22	NA	59185854	59188808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_59186167_59186323
ENSMUSG00000049305.7_108337734_108341514_1	chr9	+	1461	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	8	1623	0	1048	multi-exon	FALSE	canonical	3	208	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGCAGTACTTGGGAAA	195	False	NA	NA	False	NA	NA	NA	108337733	108341514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108337817_108340136
ENSMUSG00000049305.7_108337734_108341752_1	chr9	+	1699	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	8	1385	0	-1253	multi-exon	FALSE	canonical	3	208	junction_1	0	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCGGTCTCCTTGCT	195	False	NA	10	True	NA	NA	NA	108337733	108341752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108337817_108340136
ENSMUSG00000049313.9_41942986_42035423_1	chr9	-	2903	20	ISM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	170	66970	170	-47182	5prime_fragment	FALSE	canonical	3	338	junction_4	21.53409973794	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCATCGCTGTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	42035423	41942985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ENSMUSG00000049321.18_50796817_50806982_1	chr11	-	604	5	FSM	ENSMUSG00000049321.18	ENSMUST00000124748.8	1407	5	-3	806	-3	0	multi-exon	FALSE	canonical	0	0	junction_2	31.2209865314983	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTTCTTTAATGGTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	50806982	50796816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_50796985_50801262_50801356_50801532_50801704_50803106_50803232_50806935
ENSMUSG00000049323.9_60678930_60701988_4	chr11	+	2755	12	NIC	ENSMUSG00000049323.9	novel	7391	2	NA	NA	10579	22875	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	3217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCCAGCACGTGCTCC	NA	False	NA	NA	False	NA	NA	NA	60678929	60701988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ENSMUSG00000049382.11_101905133_101912772_1	chr15	-	1813	9	FSM	ENSMUSG00000049382.11	ENSMUST00000023952.10	1958	9	145	0	145	0	multi-exon	FALSE	canonical	3	49	junction_8	4.93552175559991	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATGCATTCGTGTAGGT	6037	False	NA	6	True	AATAAA	-32	NA	101912772	101905132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
ENSMUSG00000049396.7_76101397_76108376_1	chr11	-	3426	2	FSM	ENSMUSG00000049396.7	ENSMUST00000102500.5	3540	2	114	0	-33	0	multi-exon	FALSE	canonical	3	437	junction_1	0	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGCCTTTCTCAGAAG	NA	False	NA	-1	True	AATAAA	-22	NA	76108376	76101396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_76104750_76108303
ENSMUSG00000049422.8_75771734_75773581_2	chr10	+	596	4	NNC	ENSMUSG00000049422.8	novel	1488	5	NA	NA	327	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8132.25016011354	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	7273	False	NA	23	True	ATTAAA	-20	NA	75771733	75773581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_75771839_75772109_75772280_75773140_75773289_75773408
ENSMUSG00000049422.8_75771734_75773581_3	chr10	+	634	4	FSM	ENSMUSG00000049422.8	ENSMUST00000058906.7	939	4	327	-22	327	0	multi-exon	FALSE	canonical	3	15821	junction_1	833.259196702256	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	7273	False	NA	23	True	ATTAAA	-20	NA	75771733	75773581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_75771839_75772071_75772280_75773140_75773289_75773408
ENSMUSG00000049422.8_75771734_75773581_4	chr10	+	426	3	NIC	ENSMUSG00000049422.8	novel	1488	5	NA	NA	327	0	combination_of_known_splicesites	FALSE	canonical	2	54	junction_1	8268.5	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	7273	False	NA	23	True	ATTAAA	-20	NA	75771733	75773581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_75771839_75773140_75773289_75773408
ENSMUSG00000049422.8_75771734_75773581_5	chr10	+	582	4	NNC	ENSMUSG00000049422.8	novel	1488	5	NA	NA	327	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8132.25016011354	1397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	7273	False	NA	23	True	ATTAAA	-20	NA	75771733	75773581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_75771795_75772079_75772280_75773140_75773289_75773408
ENSMUSG00000049422.8_75771734_75773581_6	chr10	+	317	3	NNC	ENSMUSG00000049422.8	novel	1488	5	NA	NA	327	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8295.5	576	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	7273	False	NA	23	True	ATTAAA	-20	NA	75771733	75773581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_75771773_75773183_75773289_75773408
ENSMUSG00000049422.8_75771734_75773581_7	chr10	+	602	5	NNC	ENSMUSG00000049422.8	novel	1488	5	NA	NA	327	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7289.49097588439	1478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	7273	False	NA	23	True	ATTAAA	-20	NA	75771733	75773581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_75771839_75772071_75772107_75772138_75772280_75773140_75773289_75773408
ENSMUSG00000049422.8_75771734_75773581_8	chr10	+	172	2	NNC	ENSMUSG00000049422.8	novel	1488	5	NA	NA	327	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	7273	False	NA	23	True	ATTAAA	-20	NA	75771733	75773581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_75771795_75773470
ENSMUSG00000049422.8_75771946_75773581_1	chr10	+	655	3	ISM	ENSMUSG00000049422.8	ENSMUST00000058906.7	939	4	539	-22	539	0	3prime_fragment	FALSE	canonical	3	16591	junction_2	626	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	7485	False	NA	23	True	ATTAAA	-20	NA	75771945	75773581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_75772280_75773140_75773289_75773408
ENSMUSG00000049482.17_123202882_123208486_1	chr8	+	1721	15	FSM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	0	1345	0	3	multi-exon	FALSE	canonical	3	114	junction_5	16.7624458787116	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACAGTACTTGTGGGAA	8862	False	NA	17	True	AATAAA	-19	NA	123202881	123208486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
ENSMUSG00000049504.13_53386184_53389176_1	chr3	+	1799	3	ISM	ENSMUSG00000049504.13	ENSMUST00000058577.5	4472	13	15097	0	632	0	3prime_fragment	FALSE	canonical	3	36	junction_1	3.5	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACTATAGAAGTGTTTT	NA	False	NA	18	True	AATAAA	-14	NA	53386183	53389176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_53386588_53386980_53387132_53387932
ENSMUSG00000049517.9_91071284_91072849_1	chr13	+	510	4	FSM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	207	220	-52	6	multi-exon	FALSE	canonical	3	13520	junction_1	3048.72640075601	234948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTCTTACTTCCT	NA	False	NA	NA	False	AATAAA	-20	NA	91071283	91072849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_91071319_91071705_91071866_91072444_91072566_91072655
ENSMUSG00000049517.9_91071284_91073069_1	chr13	+	730	4	FSM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	207	0	-52	0	multi-exon	FALSE	canonical	3	13520	junction_1	3048.72640075601	236944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGTCTATAGGATAATT	NA	False	NA	27	True	AATAAA	-23	NA	91071283	91073069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_91071319_91071705_91071866_91072444_91072566_91072655
ENSMUSG00000049526.9_59446975_59472392_1	chr9	-	1838	14	NNC	ENSMUSG00000049526.9	novel	1126	4	NA	NA	-25262	-14974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1340	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCACGTGAGCCCCGGT	NA	False	NA	NA	False	NA	NA	NA	59472392	59446974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469646_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ENSMUSG00000049526.9_59446975_59472392_2	chr9	-	1839	14	NNC	ENSMUSG00000049526.9	novel	1126	4	NA	NA	-25262	-14974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2389	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCACGTGAGCCCCGGT	NA	False	NA	NA	False	NA	NA	NA	59472392	59446974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471266_59472103
ENSMUSG00000049526.9_59446975_59472392_3	chr9	-	1830	14	NNC	ENSMUSG00000049526.9	novel	1126	4	NA	NA	-25262	-14974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	946	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCACGTGAGCCCCGGT	NA	False	NA	NA	False	NA	NA	NA	59472392	59446974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466726_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ENSMUSG00000049536.6_135608731_135610622_1	chrX	+	1198	2	FSM	ENSMUSG00000049536.6	ENSMUST00000055104.6	2803	2	0	1605	0	-1605	multi-exon	FALSE	canonical	3	18	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGTTTCTTCTGAATC	NA	False	NA	NA	False	AATAAA	-25	NA	135608730	135610622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_135608838_135609531
ENSMUSG00000049580.13_97999875_98010495_1	chr7	-	2510	2	FSM	ENSMUSG00000049580.13	ENSMUST00000206414.2	2310	2	0	-200	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCATTTGCTGACAAATC	NA	False	NA	2	True	AATAAA	-30	NA	98010495	97999874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_98002338_98010448
ENSMUSG00000049600.9_12733879_12739464_1	chr7	-	211	2	NNC	ENSMUSG00000049600.9	novel	3908	3	NA	NA	4263	3946	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	11361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATAATCTTAAACTAAC	NA	False	NA	NA	False	NA	NA	NA	12739464	12733878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_12733935_12739309
ENSMUSG00000049600.9_12733879_12739464_2	chr7	-	210	2	NNC	ENSMUSG00000049600.9	novel	3908	3	NA	NA	4263	3946	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	9694	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATAATCTTAAACTAAC	NA	False	NA	NA	False	NA	NA	NA	12739464	12733878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_12733996_12739371
ENSMUSG00000049600.9_12733879_12739464_3	chr7	-	208	2	NNC	ENSMUSG00000049600.9	novel	3908	3	NA	NA	4263	3946	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	9287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATAATCTTAAACTAAC	NA	False	NA	NA	False	NA	NA	NA	12739464	12733878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_12733996_12739373
ENSMUSG00000049604.4_96085142_96087420_1	chr11	+	1353	2	FSM	ENSMUSG00000049604.4	ENSMUST00000062709.4	2206	2	0	853	0	-853	multi-exon	FALSE	canonical	2	9	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGTTTCCTCTCAGATT	3944	False	NA	NA	False	AATAAA	-20	NA	96085141	96087420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_96085873_96086798
ENSMUSG00000049643.16_27252711_27281047_2	chr7	+	2171	10	FSM	ENSMUSG00000049643.16	ENSMUST00000067386.14	2701	10	53	477	0	-472	multi-exon	FALSE	canonical	3	300	junction_8	25.2899238218224	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTTTCCTTCCTTCCTC	449	False	NA	28	True	AATATA	-16	NA	27252710	27281047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
ENSMUSG00000049643.16_27252711_27281382_1	chr7	+	2506	10	FSM	ENSMUSG00000049643.16	ENSMUST00000067386.14	2701	10	53	142	0	-137	multi-exon	FALSE	canonical	3	300	junction_8	25.2899238218224	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGATTAAAGGCGTGC	449	False	NA	NA	False	NA	NA	NA	27252710	27281382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
ENSMUSG00000049670.10_42063378_42074796_1	chr19	-	1901	6	NNC	ENSMUSG00000049670.10	novel	1800	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_4	36.2745089560148	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTATGAACTTTCTG	4140	False	NA	0	True	AATAAA	-24	NA	42074796	42063377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42067117_42067216_42074635
ENSMUSG00000049672.16_69690045_69696078_1	chr17	+	2076	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	0	1667	0	-1667	multi-exon	FALSE	canonical	3	85	junction_1	58	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGACTTATGTCAAAAC	NA	False	NA	NA	False	AATAAA	-21	NA	69690044	69696078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_69690265_69692415_69692500_69694306
ENSMUSG00000049672.16_69690045_69697186_1	chr17	+	3184	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	0	559	0	-559	multi-exon	FALSE	canonical	3	85	junction_1	58	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTGCTGTACTAACATC	NA	False	NA	8	True	ATTAAA	-15	NA	69690044	69697186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_69690265_69692415_69692500_69694306
ENSMUSG00000049672.16_69690045_69697539_1	chr17	+	3537	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	0	206	0	-206	multi-exon	FALSE	canonical	3	85	junction_1	58	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTCTTGATCATTCT	NA	False	NA	NA	False	TATAAA	-16	NA	69690044	69697539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_69690265_69692415_69692500_69694306
ENSMUSG00000049672.16_69690314_69697186_1	chr17	+	3066	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	0	559	0	-559	multi-exon	FALSE	canonical	3	64	junction_1	68.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTGCTGTACTAACATC	NA	False	NA	8	True	ATTAAA	-15	NA	69690313	69697186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_69690416_69692415_69692500_69694306
ENSMUSG00000049680.18_5712129_5730623_1	chr11	-	857	5	NIC	ENSMUSG00000049680.18	novel	5528	5	NA	NA	-18247	-44092	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCGTGCGCGCCGCGGTGC	8744	False	NA	NA	False	NA	NA	NA	5730623	5712128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_5712241_5715508_5715572_5718885_5719073_5719166_5719244_5730205
ENSMUSG00000049728.15_127465165_127475306_1	chr7	-	2128	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	694	2946	0	0	multi-exon	FALSE	canonical	3	42	junction_2	4	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTCTGTATTGTGGT	NA	False	NA	2	True	ATTAAA	-20	NA	127475306	127465164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127466536_127466927_127467597_127475218
ENSMUSG00000049739.11_127482037_127485168_1	chr7	+	1608	2	ISM	ENSMUSG00000049739.11	ENSMUST00000050383.8	6310	3	5164	0	3554	0	3prime_fragment	FALSE	canonical	3	153	junction_1	0	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGTGTGGTTATATC	689	False	NA	20	True	AAAACA	-19	NA	127482036	127485168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_127483091_127484614
ENSMUSG00000049751.7_69229515_69230818_1	chr12	-	109	2	NNC	ENSMUSG00000049751.7	novel	526	2	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCAAGCCTTGTGTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	69230818	69229514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_69229558_69230752
ENSMUSG00000049760.7_56914620_56916702_1	chr17	-	518	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	69	168	-20	0	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	6519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCGGTTTTCTGGTGGG	NA	False	NA	-25	True	AATAAA	-18	NA	56916702	56914619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
ENSMUSG00000049760.7_56914620_56916702_3	chr17	-	226	3	NNC	ENSMUSG00000049760.7	novel	755	4	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	945.5	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCGGTTTTCTGGTGGG	NA	False	NA	-25	True	AATAAA	-18	NA	56916702	56914619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_56914636_56915876_56916024_56916639
ENSMUSG00000049760.7_56914620_56916829_1	chr17	-	645	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	-58	168	-58	0	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	7653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCGGTTTTCTGGTGGG	NA	False	NA	-25	True	AATAAA	-18	NA	56916829	56914619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
ENSMUSG00000049775.17_165990089_165992157_1	chrX	-	614	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112172.4	768	3	154	0	-12	0	multi-exon	FALSE	canonical	3	1191	junction_1	25.5	7785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCTGCTTGGTGA	NA	False	NA	0	True	AATAAA	-15	NA	165992157	165990088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_165990532_165990932_165991048_165992101
ENSMUSG00000049792.7_111675922_111679529_1	chr12	-	1977	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	162	0	-142	0	multi-exon	FALSE	canonical	3	159	junction_1	0	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCCCCCTGTGCTGTTC	NA	False	NA	NA	False	CATAAA	-20	NA	111679529	111675921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_111677847_111679477
ENSMUSG00000049858.9_128505763_128509744_1	chr10	-	2299	4	FSM	ENSMUSG00000049858.9	ENSMUST00000054764.9	2497	4	198	0	198	0	multi-exon	FALSE	canonical	3	11	junction_3	1.88561808316413	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGAATCTCTTGGGCC	8790	False	NA	-7	True	AATAAA	-18	NA	128509744	128505762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128507796_128507972_128508151_128508407_128508472_128509720
ENSMUSG00000049881.14_157240334_157247805_1	chr1	+	781	3	FSM	ENSMUSG00000049881.14	ENSMUST00000061537.12	1194	3	412	1	124	-1	multi-exon	FALSE	canonical	3	989	junction_1	26.5	6509	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGGCCCAGTGTCTT	NA	False	NA	34	True	AATAAA	-16	NA	157240333	157247805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_157240696_157241313_157241366_157247438
ENSMUSG00000049882.11_69624402_69629791_1	chr12	-	1005	6	FSM	ENSMUSG00000049882.11	ENSMUST00000238784.2	875	6	93	-223	0	0	multi-exon	FALSE	canonical	3	55	junction_4	48.4710222710435	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGAAGCAGCATGGTTGG	NA	False	NA	-5	True	AATAAA	-24	NA	69629791	69624401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629304_69629405_69629494
ENSMUSG00000049882.11_69624402_69629884_1	chr12	-	1093	6	NIC	ENSMUSG00000049882.11	novel	1109	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	70.332353863638	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGAAGCAGCATGGTTGG	NA	False	NA	-5	True	AATAAA	-24	NA	69629884	69624401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629304_69629400_69629494
ENSMUSG00000049904.8_22462272_22469234_1	chr11	+	1384	4	FSM	ENSMUSG00000049904.8	ENSMUST00000059319.8	1568	4	184	0	184	0	multi-exon	FALSE	canonical	3	52	junction_3	9.0921211313239	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTATCTGTGTAGTTC	NA	False	NA	7	True	ATTAAA	-16	NA	22462271	22469234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_22462584_22467187_22467292_22467407_22467522_22468380
ENSMUSG00000049904.8_22462452_22469234_1	chr11	+	1204	4	FSM	ENSMUSG00000049904.8	ENSMUST00000059319.8	1568	4	364	0	364	0	multi-exon	FALSE	canonical	3	52	junction_3	9.0921211313239	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTATCTGTGTAGTTC	NA	False	NA	7	True	ATTAAA	-16	NA	22462451	22469234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_22462584_22467187_22467292_22467407_22467522_22468380
ENSMUSG00000049916.13_16931263_16943004_1	chr16	-	935	6	NIC	ENSMUSG00000049916.13	novel	1156	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	113.851833538156	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16943004	16931262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_16931491_16935343_16935449_16935657_16935729_16938819_16938944_16939159_16939416_16942853
ENSMUSG00000049950.7_3330105_3333680_1	chr2	-	923	2	FSM	ENSMUSG00000049950.7	ENSMUST00000062672.7	1042	2	0	119	0	-119	multi-exon	FALSE	canonical	3	304	junction_1	0	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGATAAGAAAACCACCC	2317	False	NA	NA	False	AATAAA	-21	NA	3333680	3330104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_3330911_3333563
ENSMUSG00000049960.5_20441295_20443593_1	chr14	-	535	3	NNC	ENSMUSG00000049960.5	novel	801	3	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	835.5	6588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACGGTCCTCTGGCATAG	8636	False	NA	-36	True	AATAAA	-14	NA	20443593	20441294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_20441529_20441960_20442222_20443553
ENSMUSG00000049960.5_20441295_20443593_2	chr14	-	530	3	NNC	ENSMUSG00000049960.5	novel	801	3	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	835.5	5770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACGGTCCTCTGGCATAG	8636	False	NA	-36	True	AATAAA	-14	NA	20443593	20441294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_20441529_20441960_20442222_20443558
ENSMUSG00000049960.5_20441295_20443702_1	chr14	-	639	3	NNC	ENSMUSG00000049960.5	novel	2572	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	835.5	8786	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACGGTCCTCTGGCATAG	8527	False	NA	-36	True	AATAAA	-14	NA	20443702	20441294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_20441529_20441960_20442222_20443558
ENSMUSG00000050002.15_58305463_58311763_1	chr13	+	723	4	FSM	ENSMUSG00000050002.15	ENSMUST00000109868.4	1462	4	-5	744	0	3	multi-exon	FALSE	canonical	3	143	junction_3	23.6220236220354	574	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGCTGTACTGTAAATTC	NA	False	NA	5	True	NA	NA	NA	58305462	58311763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_58305551_58307690_58307722_58307965_58308053_58311246
ENSMUSG00000050017.12_111478629_111535300_1	chr5	+	1836	11	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	0	-925	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	374.982999614649	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGACTCTGGCTAAGCAA	NA	False	NA	7	True	AATAAA	-13	NA	111478628	111535300	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ENSMUSG00000050017.12_111478629_111535300_2	chr5	+	1751	10	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	0	-925	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	432.941361182115	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGACTCTGGCTAAGCAA	NA	False	NA	7	True	AATAAA	-13	NA	111478628	111535300	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111534368
ENSMUSG00000050017.12_111478629_111535300_3	chr5	+	1831	11	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	0	-925	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	374.982999614649	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGACTCTGGCTAAGCAA	NA	False	NA	7	True	AATAAA	-13	NA	111478628	111535300	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494353_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ENSMUSG00000050017.12_111478629_111535830_2	chr5	+	2366	11	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	0	-395	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	374.982999614649	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGCACAGCACCCTGC	NA	False	NA	NA	False	NA	NA	NA	111478628	111535830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ENSMUSG00000050017.12_111478629_111536225_2	chr5	+	2676	10	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	432.941361182115	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478628	111536225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111534368
ENSMUSG00000050017.12_111478629_111536225_3	chr5	+	2756	11	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	374.982999614649	1138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478628	111536225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494353_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ENSMUSG00000050017.12_111478629_111536225_4	chr5	+	2753	11	NIC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	375.1786774325	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478628	111536225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ENSMUSG00000050035.8_84933589_84938369_1	chr10	-	1974	2	FSM	ENSMUSG00000050035.8	ENSMUST00000059383.8	3402	2	-10	1438	-10	256	multi-exon	FALSE	canonical	3	8	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATAATTCTCAGCTGACC	NA	False	NA	NA	False	AATAAA	-43	NA	84938369	84933588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_84935353_84938159
ENSMUSG00000050043.17_84501838_84508410_1	chr2	-	1810	8	FSM	ENSMUSG00000050043.17	ENSMUST00000053664.9	1977	8	-10	177	-10	-177	multi-exon	FALSE	canonical	3	1517	junction_2	94.3986336808766	2035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCATCATTGGAAATAGA	5281	False	NA	NA	False	ATTAAA	-16	NA	84508410	84501837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ENSMUSG00000050052.13_14002008_14024743_1	chr8	-	2331	2	FSM	ENSMUSG00000050052.13	ENSMUST00000210414.2	323	2	-50	-1958	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4814	False	NA	-4	True	ATTAAA	-18	NA	14024743	14002007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_14004136_14024540
ENSMUSG00000050052.13_14002008_14025032_1	chr8	-	2478	4	FSM	ENSMUSG00000050052.13	ENSMUST00000145695.2	373	4	0	-2105	0	0	multi-exon	FALSE	canonical	3	28	junction_3	120.875509880575	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4525	False	NA	-4	True	ATTAAA	-18	NA	14025032	14002007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_14004136_14005719_14005818_14024540_14024730_14024969
ENSMUSG00000050052.13_14002008_14025032_2	chr8	-	2422	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_3	126.043202469982	1027	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4525	False	NA	-4	True	ATTAAA	-18	NA	14025032	14002007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_14004136_14005719_14005818_14024540_14024730_14025025
ENSMUSG00000050052.13_14002486_14024743_2	chr8	-	1951	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	34	478	0	-356	multi-exon	FALSE	canonical	3	271	junction_2	12.5	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGAAATTATGGAGATT	4814	False	NA	-6	True	AATAAA	-20	NA	14024743	14002485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_14004136_14005719_14005818_14024540
ENSMUSG00000050052.13_14003130_14024743_1	chr8	-	1307	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	34	1122	0	626	multi-exon	FALSE	canonical	3	271	junction_2	12.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGGAAGAAACACTAGGAA	4814	False	NA	NA	False	AATAAA	-20	NA	14024743	14003129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_14004136_14005719_14005818_14024540
ENSMUSG00000050071.9_135115293_135116206_1	chrX	-	238	3	FSM	ENSMUSG00000050071.9	ENSMUST00000058125.9	866	3	56	572	-14	0	multi-exon	FALSE	canonical	3	4595	junction_1	588.5	2609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGAGAATGACCATCAGA	NA	False	NA	10	True	NA	NA	NA	135116206	135115292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135115333_135115652_135115730_135116085
ENSMUSG00000050088.10_15165271_15179789_1	chr17	+	1502	11	NIC	ENSMUSG00000050088.10	novel	2506	2	NA	NA	1738	-43	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACATTTAAATGATTAAAA	NA	False	NA	NA	False	NA	NA	NA	15165270	15179789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680
ENSMUSG00000050122.20_37082025_37086714_1	chr1	+	672	3	NNC	ENSMUSG00000050122.20	novel	1636	8	NA	NA	7236	-16016	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTACACAACTGTTATCAT	NA	False	NA	NA	False	NA	NA	NA	37082024	37086714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_37082066_37083844_37084290_37086528
ENSMUSG00000050122.20_37082025_37102730_1	chr1	+	1035	5	NNC	ENSMUSG00000050122.20	novel	1636	8	NA	NA	7236	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.0989864402116	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTGCATTATTTCCT	NA	False	NA	NA	False	AATAAA	-22	NA	37082024	37102730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_37082066_37083844_37084290_37090797_37090961_37099410_37099581_37102514
ENSMUSG00000050150.17_135053807_135064075_1	chr3	+	996	3	ISM	ENSMUSG00000050150.17	ENSMUST00000159658.8	588	4	17	13665	0	8	5prime_fragment	FALSE	canonical	3	17	junction_1	66	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTATTCATTGTTTTTTCT	NA	False	NA	NA	False	AAGAAA	-2	NA	135053806	135064075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_135053884_135060771_135060833_135063217
ENSMUSG00000050150.17_135053807_135099879_1	chr3	+	1856	11	NIC	ENSMUSG00000050150.17	novel	2072	11	NA	NA	0	1035	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	33.6964389809962	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCTTTATTTTTGTTT	NA	False	NA	6	True	AATACA	-16	NA	135053806	135099879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097921_135098011_135099720
ENSMUSG00000050150.17_135053807_135103588_1	chr3	+	2099	12	NIC	ENSMUSG00000050150.17	novel	2248	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	36.7153445976695	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGTCTCATGATTTAT	NA	False	NA	7	True	ATTAAA	-19	NA	135053806	135103588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720_135099830_135103356
ENSMUSG00000050157.7_75773557_75776445_1	chr10	-	1167	7	FSM	ENSMUSG00000050157.7	ENSMUST00000219979.2	714	7	0	-453	0	0	multi-exon	FALSE	canonical	3	20	junction_5	8.23441288469042	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAATTATGTCTCCTGT	4977	False	NA	NA	False	AGTAAA	-42	NA	75776445	75773556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_75774191_75774995_75775166_75775239_75775315_75775546_75775673_75775764_75775852_75776227_75776255_75776397
ENSMUSG00000050197.6_37210603_37218845_1	chrX	+	370	3	FSM	ENSMUSG00000050197.6	ENSMUST00000152730.4	876	3	507	-1	507	1	multi-exon	FALSE	canonical	3	73	junction_1	2	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTTAATTTTATGTGCT	NA	False	NA	3	True	AATAAA	-16	NA	37210602	37218845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_37210700_37211950_37211997_37218618
ENSMUSG00000050212.5_126042325_126043658_1	chr4	+	892	3	FSM	ENSMUSG00000050212.5	ENSMUST00000052876.3	1689	3	788	9	0	0	multi-exon	FALSE	canonical	3	53	junction_1	143	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGCGACTCAGTCTCT	7130	False	NA	11	True	AATGAA	-6	NA	126042324	126043658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_126042425_126042676_126042839_126043028
ENSMUSG00000050212.5_126042325_126043658_2	chr4	+	825	3	FSM	ENSMUSG00000050212.5	ENSMUST00000106152.3	1364	3	529	10	0	0	multi-exon	FALSE	canonical	3	244	junction_1	47.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGCGACTCAGTCTCT	7130	False	NA	11	True	AATGAA	-6	NA	126042324	126043658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_126042425_126042743_126042839_126043028
ENSMUSG00000050244.10_12449289_12453778_1	chr13	+	867	5	ISM	ENSMUSG00000050244.10	ENSMUST00000222091.2	2482	17	9667	1392	0	4	internal_fragment	FALSE	canonical	3	404	junction_1	51.3833630662688	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	NA	False	NA	9	True	AGTAAA	-23	NA	12449288	12453778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_+_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ENSMUSG00000050270.13_66915980_66926144_1	chr11	+	1575	7	NNC	ENSMUSG00000050270.13	novel	1597	6	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	9.01849950564579	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGGGGAGAATTACTAG	3918	False	NA	NA	False	NA	NA	NA	66915979	66926144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_66916098_66916734_66916765_66920791_66920853_66921887_66922012_66923006_66923067_66924934_66925890_66925917
ENSMUSG00000050310.10_6737862_6789071_1	chr15	+	708	8	FSM	ENSMUSG00000050310.10	ENSMUST00000226181.2	4695	8	0	3987	0	975	multi-exon	FALSE	canonical	3	60	junction_7	8.20900451346208	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATTTTGCACCTTCTTA	NA	False	NA	NA	False	AATAAA	-16	NA	6737861	6789071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968
ENSMUSG00000050332.8_94467732_94488478_1	chrX	-	4688	2	FSM	ENSMUSG00000050332.8	ENSMUST00000084535.6	8496	2	0	3808	0	-3808	multi-exon	FALSE	canonical	3	18	junction_1	0	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGTAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	94488478	94467731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_94472205_94488263
ENSMUSG00000050335.18_47611270_47623254_1	chr14	+	1083	6	FSM	ENSMUSG00000050335.18	ENSMUST00000150290.9	1298	6	-76	291	0	3	multi-exon	TRUE	canonical	3	42	junction_1	20.2286924935845	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	4	True	AATAAA	-17	NA	47611269	47623254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_47611437_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ENSMUSG00000050335.18_47611373_47623254_2	chr14	+	980	6	FSM	ENSMUSG00000050335.18	ENSMUST00000150290.9	1298	6	27	291	0	3	multi-exon	FALSE	canonical	3	42	junction_1	20.2286924935845	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	4	True	AATAAA	-17	NA	47611372	47623254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_47611437_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ENSMUSG00000050335.18_47611373_47623254_3	chr14	+	953	6	FSM	ENSMUSG00000050335.18	ENSMUST00000142734.8	1419	6	103	363	0	3	multi-exon	FALSE	canonical	3	33	junction_1	23.7941169199447	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	4	True	AATAAA	-17	NA	47611372	47623254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_47611410_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ENSMUSG00000050357.10_106423882_106424827_2	chr8	+	513	4	ISM	ENSMUSG00000050357.10	ENSMUST00000212643.2	2235	8	2186	-52	2186	8	3prime_fragment	FALSE	canonical	3	41	junction_1	6.94422221866655	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	8475	False	NA	NA	False	ATTAAA	-15	NA	106423881	106424827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_106424071_106424192_106424274_106424499_106424578_106424662
ENSMUSG00000050357.10_106424790_106427717_1	chr8	+	1478	10	NIC	ENSMUSG00000050357.10	novel	2526	17	NA	NA	3094	2898	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGGGAGAGGAAGCACGTG	9383	False	NA	NA	False	NA	NA	NA	106424789	106427717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426793_106426913_106427035_106427334_106427472_106427551
ENSMUSG00000050357.10_106424790_106427717_2	chr8	+	1528	11	NIC	ENSMUSG00000050357.10	novel	2526	17	NA	NA	3094	2898	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	389	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGGGAGAGGAAGCACGTG	9383	False	NA	NA	False	NA	NA	NA	106424789	106427717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426793_106426913_106426991_106427078_106427173_106427334_106427472_106427551
ENSMUSG00000050357.10_106424790_106427717_3	chr8	+	1264	10	NIC	ENSMUSG00000050357.10	novel	2526	17	NA	NA	3094	2898	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGGGAGAGGAAGCACGTG	9383	False	NA	NA	False	NA	NA	NA	106424789	106427717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427472_106427551
ENSMUSG00000050357.10_106424790_106427717_4	chr8	+	1546	10	NIC	ENSMUSG00000050357.10	novel	2526	17	NA	NA	3094	2898	intron_retention	FALSE	non_canonical	0	0	junction_1	0	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGGGAGAGGAAGCACGTG	9383	False	NA	NA	False	NA	NA	NA	106424789	106427717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427472_106427551
ENSMUSG00000050373.14_164627937_164634691_1	chr2	+	1525	3	FSM	ENSMUSG00000050373.14	ENSMUST00000056181.7	2590	3	26	1039	0	147	multi-exon	FALSE	canonical	3	13	junction_2	6.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTAGCAATCTCTTTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	164627936	164634691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_164628245_164628617_164628776_164633632
ENSMUSG00000050373.14_164634688_164646751_1	chr2	+	1004	6	NIC	ENSMUSG00000050373.14	novel	1825	3	NA	NA	1116	11015	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGTTGAGAGAAACGCGGA	NA	False	NA	NA	False	NA	NA	NA	164634687	164646751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_164634931_164637001_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646609
ENSMUSG00000050373.14_164634688_164646751_2	chr2	+	1101	6	NIC	ENSMUSG00000050373.14	novel	1825	3	NA	NA	1116	11015	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGTTGAGAGAAACGCGGA	NA	False	NA	NA	False	NA	NA	NA	164634687	164646751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646609
ENSMUSG00000050410.16_35823631_35827690_1	chr17	-	1695	4	NIC	ENSMUSG00000050410.16	novel	1732	4	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	34.8839345385363	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCGTTGAATCTAAGTCT	9364	False	NA	-5	True	AATAAA	-20	NA	35827690	35823630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_35824082_35825370_35825918_35826774_35827437_35827655
ENSMUSG00000050424.10_72077594_72083300_1	chrX	-	2598	5	NNC	ENSMUSG00000050424.10	novel	1280	2	NA	NA	-2591	0	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_1	20.9568008054665	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTATGTTCTTTCTGGC	NA	False	NA	-7	True	AATAAA	-14	NA	72083300	72077593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_72077934_72078769_72080775_72080892_72080952_72081548_72081672_72083229
ENSMUSG00000050471.18_35122451_35128310_1	chr9	-	2837	15	NNC	ENSMUSG00000050471.18	novel	1662	7	NA	NA	18431	5810	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCTACGAGCCTCCGTGG	NA	False	NA	NA	False	NA	NA	NA	35128310	35122450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233_35127457_35127612
ENSMUSG00000050471.18_35122451_35128310_2	chr9	-	2835	15	NNC	ENSMUSG00000050471.18	novel	1662	7	NA	NA	18431	5810	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCTACGAGCCTCCGTGG	NA	False	NA	NA	False	NA	NA	NA	35128310	35122450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233_35127457_35127614
ENSMUSG00000050471.18_35122451_35128310_3	chr9	-	2988	14	NNC	ENSMUSG00000050471.18	novel	1662	7	NA	NA	18431	5810	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCTACGAGCCTCCGTGG	NA	False	NA	NA	False	NA	NA	NA	35128310	35122450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_35122702_35123287_35123372_35123643_35123808_35124020_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ENSMUSG00000050471.18_35122451_35128310_4	chr9	-	2841	15	NNC	ENSMUSG00000050471.18	novel	1662	7	NA	NA	18431	5810	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCTACGAGCCTCCGTGG	NA	False	NA	NA	False	NA	NA	NA	35128310	35122450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233_35127450_35127601
ENSMUSG00000050471.18_35128531_35179073_1	chr9	-	1617	8	FSM	ENSMUSG00000050471.18	ENSMUST00000059057.14	1860	8	28	215	0	0	multi-exon	FALSE	canonical	3	113	junction_5	33.1724006256	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCTGGCTCTACTTTG	6392	False	NA	-20	True	ATTAAA	-21	NA	35179073	35128530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
ENSMUSG00000050545.11_4797907_4819232_1	chr12	-	1160	7	FSM	ENSMUSG00000050545.11	ENSMUST00000053458.7	2851	7	0	1691	0	0	multi-exon	FALSE	canonical	3	18	junction_3	2.69258240356725	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCGTATGTGATATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	4819232	4797906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_4798178_4798263_4798352_4812326_4812408_4812999_4813192_4814078_4814148_4818389_4818522_4818905
ENSMUSG00000050555.10_35470762_35478439_1	chr9	-	1847	3	NIC	ENSMUSG00000050555.10	novel	4269	2	NA	NA	2954	1354	intron_retention	FALSE	non_canonical	0	0	junction_1	0	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCAGTAAGCATGCGCG	NA	False	NA	NA	False	NA	NA	NA	35478439	35470761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_35470814_35476079_35477152_35477716
ENSMUSG00000050555.10_35472116_35481399_1	chr9	-	1678	4	FSM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	295	0	-6	0	multi-exon	FALSE	canonical	3	233	junction_2	23.2808934536456	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGAACCTTGTTTTA	NA	False	NA	51	True	ATTAAA	-17	NA	35481399	35472115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_35473401_35475358_35475474_35479750_35479802_35481172
ENSMUSG00000050555.10_35472624_35481399_1	chr9	-	1170	4	FSM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	295	508	-6	-508	multi-exon	FALSE	canonical	3	233	junction_2	23.2808934536456	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCTCCGTCCAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	35481399	35472623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_35473401_35475358_35475474_35479750_35479802_35481172
ENSMUSG00000050565.17_155911472_155928544_1	chr1	+	1931	3	NIC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	0	-731	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	105	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTCTAATTTTCTCCT	NA	False	NA	10	True	AATAAA	-14	NA	155911471	155928544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_155911838_155916820_155916881_155927039
ENSMUSG00000050565.17_155911472_155929276_1	chr1	+	2663	3	NIC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	105	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGGTTTTATTGTTT	NA	False	NA	4	True	AATAAA	-16	NA	155911471	155929276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_155911838_155916820_155916881_155927039
ENSMUSG00000050565.17_155916636_155928544_1	chr1	+	1678	3	FSM	ENSMUSG00000050565.17	ENSMUST00000097526.3	2589	3	-27	938	0	-731	multi-exon	FALSE	canonical	3	163	junction_1	41.5	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTCTAATTTTCTCCT	NA	False	NA	10	True	AATAAA	-14	NA	155916635	155928544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_155916749_155916820_155916881_155927039
ENSMUSG00000050565.17_155916636_155928544_2	chr1	+	1618	2	FSM	ENSMUSG00000050565.17	ENSMUST00000065648.15	2529	2	-27	938	0	-731	multi-exon	FALSE	canonical	3	145	junction_1	0	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTCTAATTTTCTCCT	NA	False	NA	10	True	AATAAA	-14	NA	155916635	155928544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_155916749_155927039
ENSMUSG00000050565.17_155916636_155929276_1	chr1	+	2350	2	FSM	ENSMUSG00000050565.17	ENSMUST00000065648.15	2529	2	-27	206	0	1	multi-exon	FALSE	canonical	3	145	junction_1	0	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGGTTTTATTGTTT	NA	False	NA	4	True	AATAAA	-16	NA	155916635	155929276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_155916749_155927039
ENSMUSG00000050565.17_155916636_155929276_2	chr1	+	2410	3	FSM	ENSMUSG00000050565.17	ENSMUST00000097526.3	2589	3	-27	206	0	1	multi-exon	FALSE	canonical	3	163	junction_1	41.5	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGGTTTTATTGTTT	NA	False	NA	4	True	AATAAA	-16	NA	155916635	155929276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_155916749_155916820_155916881_155927039
ENSMUSG00000050605.18_23990464_23998768_1	chr7	-	2148	7	FSM	ENSMUSG00000050605.18	ENSMUST00000077780.14	2480	7	332	0	-33	0	multi-exon	FALSE	canonical	3	35	junction_1	4.81028989655394	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTGGATTCTTTGTGTG	NA	False	NA	7	True	TATAAA	-23	NA	23998768	23990463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23996997_23997164_23997698_23997801_23998617
ENSMUSG00000050605.18_23990464_23999062_1	chr7	-	2442	7	FSM	ENSMUSG00000050605.18	ENSMUST00000077780.14	2480	7	38	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	4.81028989655394	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTGGATTCTTTGTGTG	NA	False	NA	7	True	TATAAA	-23	NA	23999062	23990463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23996997_23997164_23997698_23997801_23998617
ENSMUSG00000050608.12_138831102_138858349_1	chr4	-	497	4	FSM	ENSMUSG00000050608.12	ENSMUST00000143971.2	2549	4	75	1977	-44	0	multi-exon	FALSE	canonical	3	2580	junction_1	67.4553350167518	12499	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGCAAGCAATGCCTTT	5254	False	NA	-20	True	AATAAA	-16	NA	138858349	138831101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_138831324_138832300_138832411_138833166_138833215_138858232
ENSMUSG00000050621.8_114811434_114811807_1	chr9	-	353	2	Genic_Genomic	ENSMUSG00000050621.8	novel	374	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTATCCCTTGGCCAGG	7274	False	NA	NA	False	NA	NA	NA	114811807	114811433	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_-_114811483_114811503
ENSMUSG00000050623.6_6899798_6902727_2	chr19	-	911	4	NIC	ENSMUSG00000050623.6	novel	806	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	36	junction_3	4.98887651569859	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGAGTCAGTGCGTGGC	7411	False	NA	-6	True	ATTAAA	-15	NA	6902727	6899797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_6900029_6900668_6900968_6902161_6902475_6902659
ENSMUSG00000050627.14_114728843_114762947_1	chr9	-	2856	9	NNC	ENSMUSG00000050627.14	novel	4391	8	NA	NA	0	-434	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	29.0376910239089	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGAGCCTATTTTTCC	NA	False	NA	-7	True	AATAAA	-20	NA	114762947	114728842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_114730448_114731440_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ENSMUSG00000050627.14_114729506_114762947_1	chr9	-	2193	9	NNC	ENSMUSG00000050627.14	novel	4391	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	29.0376910239089	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAAACTCTGTACATATGT	NA	False	NA	NA	False	TTTAAA	-3	NA	114762947	114729505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_114730448_114731440_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ENSMUSG00000050627.14_114730151_114762947_1	chr9	-	1548	9	NNC	ENSMUSG00000050627.14	novel	4391	8	NA	NA	0	-645	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	29.0376910239089	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAGACTATGAGAGTCT	NA	False	NA	NA	False	CATAAA	-18	NA	114762947	114730150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_114730448_114731440_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ENSMUSG00000050668.11_79142996_79152671_1	chr17	+	1090	10	FSM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	-22	3066	0	-116	multi-exon	FALSE	canonical	3	101	junction_6	15.3405779986718	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCCTTTGTATAGCACT	8830	False	NA	12	True	AATAAA	-28	NA	79142995	79152671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
ENSMUSG00000050668.11_79142996_79152671_2	chr17	+	963	9	NIC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	0	-116	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	40.2086355774478	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCCTTTGTATAGCACT	8830	False	NA	12	True	AATAAA	-28	NA	79142995	79152671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_79143108_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
ENSMUSG00000050668.11_79142996_79152787_1	chr17	+	1206	10	FSM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	-22	2950	0	0	multi-exon	FALSE	canonical	3	101	junction_6	15.3405779986718	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACAAGTGATGTGGCATT	8830	False	NA	8	True	AATACA	-20	NA	79142995	79152787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
ENSMUSG00000050668.11_79142996_79152787_2	chr17	+	1079	9	NIC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	40.2086355774478	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACAAGTGATGTGGCATT	8830	False	NA	8	True	AATACA	-20	NA	79142995	79152787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_79143108_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
ENSMUSG00000050697.10_5173373_5208414_1	chr15	+	1565	8	NIC	ENSMUSG00000050697.10	novel	4618	9	NA	NA	0	-2959	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	45.007482371132	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAAATTTTGCTTATTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	5173372	5208414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_5173478_5190083_5190226_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ENSMUSG00000050708.17_45107368_45109136_1	chr7	-	796	4	FSM	ENSMUSG00000050708.17	ENSMUST00000094434.13	968	4	172	0	-61	0	multi-exon	TRUE	canonical	3	56898	junction_1	7359.57672393974	3524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109136	45107367	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108953
ENSMUSG00000050708.17_45107513_45109263_1	chr7	-	778	4	FSM	ENSMUSG00000050708.17	ENSMUST00000094434.13	968	4	45	145	0	18	multi-exon	FALSE	canonical	3	56898	junction_1	7359.57672393974	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGGCTCCCCCCTCTGCT	NA	False	NA	NA	False	NA	NA	NA	45109263	45107512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108953
ENSMUSG00000050732.10_72362211_72367531_1	chr6	-	660	3	FSM	ENSMUSG00000050732.10	ENSMUST00000059983.10	820	3	155	5	155	0	multi-exon	FALSE	canonical	3	289	junction_1	0.5	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACGAGGCGCTTTACTC	8248	False	NA	-23	True	AATAAA	-20	NA	72367531	72362210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72362637_72365244_72365404_72367456
ENSMUSG00000050751.15_125095788_125103248_1	chr8	-	2342	4	ISM	ENSMUSG00000050751.15	ENSMUST00000136892.3	1739	7	16707	-974	-963	0	3prime_fragment	FALSE	canonical	3	93	junction_3	5.71547606649408	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAGTATGTGATTTTG	NA	False	NA	-2	True	AATAAA	-25	NA	125103248	125095787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848
ENSMUSG00000050751.15_125095788_125103248_2	chr8	-	2247	5	NNC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	-963	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	40.5732362524855	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAGTATGTGATTTTG	NA	False	NA	-2	True	AATAAA	-25	NA	125103248	125095787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125103124
ENSMUSG00000050777.8_119995253_120001510_1	chr1	-	871	2	FSM	ENSMUSG00000050777.8	ENSMUST00000056089.8	1311	2	294	146	294	-146	multi-exon	FALSE	canonical	3	40	junction_1	0	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGTATCCTAAAATGTC	NA	False	NA	NA	False	ATTAAA	-19	NA	120001510	119995252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_119996055_120001441
ENSMUSG00000050846.10_75812801_75821144_1	chr15	+	2381	2	FSM	ENSMUSG00000050846.10	ENSMUST00000037260.8	2486	2	0	105	0	-105	multi-exon	FALSE	canonical	3	106	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTTCCTGTTTTGC	NA	False	NA	-95	True	ATTAAA	-16	NA	75812800	75821144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_75813009_75818971
ENSMUSG00000050854.10_118398138_118400048_1	chr4	-	1682	2	FSM	ENSMUSG00000050854.10	ENSMUST00000150044.2	717	2	111	-1076	111	0	multi-exon	FALSE	canonical	3	10	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTCTGCACCATGGCA	9202	False	NA	NA	False	AATAAA	-23	NA	118400048	118398137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_118399569_118399797
ENSMUSG00000050855.17_29543361_29553066_1	chr7	-	2828	5	NNC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	9.83298021964857	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTGACTTTGTGGTG	3451	False	NA	-4	True	AATAAA	-21	NA	29553066	29543360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552850
ENSMUSG00000050891.11_58772823_58805587_1	chr15	-	1002	11	NIC	ENSMUSG00000050891.11	novel	915	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	35.5971909004067	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTTTTATGA	NA	False	NA	-1	True	ATTAAA	-16	NA	58805587	58772822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58798284_58798335_58800392_58800599_58805527
ENSMUSG00000050891.11_58772823_58805587_2	chr15	-	862	11	NIC	ENSMUSG00000050891.11	novel	915	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_8	26.3417918904542	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTTTTATGA	NA	False	NA	-1	True	ATTAAA	-16	NA	58805587	58772822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58798284_58798335_58800532_58800599_58805527
ENSMUSG00000050891.11_58772823_58805587_3	chr15	-	1066	12	NIC	ENSMUSG00000050891.11	novel	915	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	29.9911832774261	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTTTTATGA	NA	False	NA	-1	True	ATTAAA	-16	NA	58805587	58772822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800392_58800599_58805527
ENSMUSG00000050891.11_58772823_58805587_4	chr15	-	1002	12	NIC	ENSMUSG00000050891.11	novel	915	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	30.1270038941207	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTTTTATGA	NA	False	NA	-1	True	ATTAAA	-16	NA	58805587	58772822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795677_58795818_58798284_58798335_58800532_58800599_58805527
ENSMUSG00000050908.13_10229813_10241395_1	chr16	-	1223	11	NIC	ENSMUSG00000050908.13	novel	3315	7	NA	NA	5654	8608	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGAACCTCAGGGGCGTGT	NA	False	NA	NA	False	NA	NA	NA	10241395	10229812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ENSMUSG00000050908.13_10229813_10242292_1	chr16	-	2120	11	NIC	ENSMUSG00000050908.13	novel	3315	7	NA	NA	4757	8608	intron_retention	FALSE	non_canonical	0	0	junction_1	0	659	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGAACCTCAGGGGCGTGT	NA	False	NA	NA	False	NA	NA	NA	10242292	10229812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ENSMUSG00000050908.13_10229813_10243193_1	chr16	-	3021	11	NIC	ENSMUSG00000050908.13	novel	3315	7	NA	NA	3856	8608	intron_retention	FALSE	non_canonical	0	0	junction_1	0	738	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGAACCTCAGGGGCGTGT	NA	False	NA	NA	False	NA	NA	NA	10243193	10229812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ENSMUSG00000050914.17_46449939_46452937_1	chr8	-	718	5	NNC	ENSMUSG00000050914.17	novel	927	5	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_4	13.6083614002568	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGCATTCTTTACTA	NA	False	NA	NA	False	ATTAAA	-22	NA	46452937	46449938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452895
ENSMUSG00000050917.6_144415502_144418212_1	chr7	+	1883	3	FSM	ENSMUSG00000050917.6	ENSMUST00000060336.5	3030	3	379	768	379	-768	multi-exon	FALSE	canonical	3	677	junction_2	22.5	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGAGCTCCTCCCAAAC	8381	False	NA	NA	False	NA	NA	NA	144415501	144418212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_144415570_144415968_144416073_144416501
ENSMUSG00000050917.6_144415502_144418982_1	chr7	+	2653	3	FSM	ENSMUSG00000050917.6	ENSMUST00000060336.5	3030	3	379	-2	379	2	multi-exon	FALSE	canonical	3	677	junction_2	22.5	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGTGTCTGCTTTGTC	8381	False	NA	30	True	ATTAAA	-20	NA	144415501	144418982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_144415570_144415968_144416073_144416501
ENSMUSG00000050973.12_79882613_79888369_1	chr7	+	749	2	FSM	ENSMUSG00000050973.12	ENSMUST00000062915.9	4189	2	0	3440	0	-3440	multi-exon	FALSE	canonical	3	81	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTTTCCGGATGCAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	79882612	79888369	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79882954_79887961
ENSMUSG00000050973.12_79882613_79889556_1	chr7	+	1936	2	FSM	ENSMUSG00000050973.12	ENSMUST00000062915.9	4189	2	0	2253	0	-2253	multi-exon	FALSE	canonical	3	81	junction_1	0	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTGTTGTTGTTTTC	NA	False	NA	8	True	AGTAAA	-11	NA	79882612	79889556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79882954_79887961
ENSMUSG00000051007.16_140988097_140993989_1	chr7	-	1448	8	FSM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	60	390	0	0	multi-exon	FALSE	canonical	3	140	junction_4	16.4564980032391	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTGTTGTTTGTTT	5497	False	NA	-1	True	NA	NA	NA	140993989	140988096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140991005_140991710_140991788_140993914
ENSMUSG00000051007.16_140988097_140993989_2	chr7	-	1403	8	NNC	ENSMUSG00000051007.16	novel	1898	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	60.2725104023723	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTGTTGTTTGTTT	5497	False	NA	-1	True	NA	NA	NA	140993989	140988096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990735_140990799_140990898_140991005_140991710_140991788_140993914
ENSMUSG00000051007.16_140988097_140993989_3	chr7	-	1442	8	NNC	ENSMUSG00000051007.16	novel	1898	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	60.5212055938298	771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTGTTGTTTGTTT	5497	False	NA	-1	True	NA	NA	NA	140993989	140988096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140990999_140991710_140991788_140993914
ENSMUSG00000051007.16_140988437_140993989_2	chr7	-	1108	8	FSM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	60	730	0	-325	multi-exon	FALSE	canonical	3	140	junction_4	16.4564980032391	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCCTATGCAATGGTGT	5497	False	NA	NA	False	NA	NA	NA	140993989	140988436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140991005_140991710_140991788_140993914
ENSMUSG00000051043.17_114742668_114759922_1	chr11	+	1821	4	ISM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	0	3521	0	0	5prime_fragment	FALSE	canonical	3	20	junction_1	8.2192186706253	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGCTTTGGGCTTGTG	928	False	NA	NA	False	AATAAA	-19	NA	114742667	114759922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_114742713_114754292_114755373_114757450_114757546_114759321
ENSMUSG00000051048.18_99954707_99968906_1	chr7	+	1563	9	NNC	ENSMUSG00000051048.18	novel	2361	13	NA	NA	3919	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	4.89738450603993	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTCTAACAGCGACTAT	NA	False	NA	8	True	ATTAAA	-15	NA	99954706	99968906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_99954871_99955073_99955251_99959993_99960059_99962412_99962573_99963814_99963878_99966248_99966318_99967188_99967286_99968116_99968506_99968527
ENSMUSG00000051118.10_19791841_19839619_1	chr9	+	564	2	Genic_Genomic	ENSMUSG00000051118.10	novel	9649	3	NA	NA	-36320	-801	multi-exon	FALSE	canonical	0	0	junction_1	0	11619	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGTAGACTTTCAACCA	NA	False	NA	NA	False	NA	NA	NA	19791840	19839619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_19791890_19839104
ENSMUSG00000051159.17_101290987_101294381_1	chrX	-	769	3	FSM	ENSMUSG00000051159.17	ENSMUST00000134887.8	607	3	171	-333	0	0	multi-exon	FALSE	canonical	3	12	junction_2	97.5	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCCTGGGTGTGTTCTT	NA	False	NA	0	True	AATAAA	-20	NA	101294381	101290986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_101291615_101292168_101292294_101294365
ENSMUSG00000051159.17_101290987_101294552_1	chrX	-	940	3	FSM	ENSMUSG00000051159.17	ENSMUST00000134887.8	607	3	0	-333	0	0	multi-exon	FALSE	canonical	3	12	junction_2	97.5	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCCTGGGTGTGTTCTT	NA	False	NA	0	True	AATAAA	-20	NA	101294552	101290986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_101291615_101292168_101292294_101294365
ENSMUSG00000051159.17_101290987_101295686_1	chrX	-	800	3	FSM	ENSMUSG00000051159.17	ENSMUST00000050551.10	901	3	101	0	101	0	multi-exon	FALSE	canonical	3	131	junction_2	38	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCCTGGGTGTGTTCTT	NA	False	NA	0	True	AATAAA	-20	NA	101295686	101290986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_101291615_101292168_101292294_101295639
ENSMUSG00000051169.15_113392290_113396296_1	chr6	-	1114	8	NIC	ENSMUSG00000051169.15	novel	1224	9	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	61.7423877816496	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAGCAGATGTTTACC	NA	False	NA	-18	True	AATAAA	-32	NA	113396296	113392289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_113392684_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
ENSMUSG00000051176.7_43747251_43760094_1	chr8	-	2702	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	-77	-853	-77	849	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	11960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTCATTTTTATTTCT	NA	False	NA	-12	True	CATAAA	-19	NA	43760094	43747250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
ENSMUSG00000051176.7_43748100_43757944_1	chr8	-	1901	4	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	2029	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	2012.76101136943	841	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43757944	43748099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43757679
ENSMUSG00000051176.7_43748100_43758912_3	chr8	-	1858	5	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	1061	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	2142.59807243449	1346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43758912	43748099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43757679_43757706_43758716
ENSMUSG00000051176.7_43748100_43759973_1	chr8	-	1719	4	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1805.87541098493	1563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43759973	43748099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_43749574_43753664_43753730_43757512_43757597_43759877
ENSMUSG00000051176.7_43748100_43759973_2	chr8	-	1867	5	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	2131.08874756543	941	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43759973	43748099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758460_43758596_43759877
ENSMUSG00000051176.7_43748100_43759973_3	chr8	-	1648	3	NIC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	35	junction_2	2147	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43759973	43748099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_43749574_43753664_43753743_43759877
ENSMUSG00000051176.7_43748100_43759973_4	chr8	-	1738	4	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	1803.63564933596	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43759973	43748099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_43749574_43753664_43753743_43757506_43757597_43759877
ENSMUSG00000051176.7_43748100_43760039_2	chr8	-	1785	4	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1805.87541098493	4536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43760039	43748099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_43749574_43753664_43753743_43757525_43757597_43759877
ENSMUSG00000051176.7_43748100_43760039_3	chr8	-	2196	6	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	2088.03932913152	1516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43760039	43748099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758460_43758596_43758716_43758980_43759877
ENSMUSG00000051176.7_43748100_43760039_4	chr8	-	1734	5	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1757.75174228331	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43760039	43748099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_43748736_43748799_43749574_43753664_43753743_43757512_43757597_43759877
ENSMUSG00000051176.7_43748100_43760039_5	chr8	-	1962	5	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	2142.33171742847	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43760039	43748099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758431_43758596_43759877
ENSMUSG00000051176.7_43748100_43760039_6	chr8	-	2756	4	NNC	ENSMUSG00000051176.7	novel	1744	4	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2029.25936133249	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43760039	43748099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_43749574_43753664_43753743_43757512_43758069_43759391
ENSMUSG00000051176.7_43748100_43760039_7	chr8	-	1709	5	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	230	junction_1	1663.49968064319	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43760039	43748099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_43749173_43749261_43749574_43753664_43753743_43757512_43757597_43759877
ENSMUSG00000051176.7_43748100_43760094_1	chr8	-	1859	4	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	1803.63564933596	9341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43760094	43748099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_43749574_43753664_43753743_43757506_43757597_43759877
ENSMUSG00000051176.7_43748100_43760094_2	chr8	-	1988	5	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	2131.08874756543	2791	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43760094	43748099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758460_43758596_43759877
ENSMUSG00000051176.7_43748230_43760039_1	chr8	-	1668	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	-22	126	-22	-126	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGATTTTTGTTTTTC	NA	False	NA	NA	False	AATACA	-16	NA	43760039	43748229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
ENSMUSG00000051220.3_101186563_101200711_1	chrX	-	4075	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	-14	1241	-14	-1241	multi-exon	FALSE	canonical	3	249	junction_1	0	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTTCCATTCATTTTC	NA	False	NA	-3	True	ATTAAA	-15	NA	101200711	101186562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_101190440_101200513
ENSMUSG00000051220.3_101187327_101200697_1	chrX	-	3297	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	0	2005	0	-2005	multi-exon	FALSE	canonical	3	249	junction_1	0	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAATCCATCTCGAAGG	NA	False	NA	NA	False	NA	NA	NA	101200697	101187326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_101190440_101200513
ENSMUSG00000051220.3_101187327_101200711_1	chrX	-	3311	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	-14	2005	-14	-2005	multi-exon	FALSE	canonical	3	249	junction_1	0	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAATCCATCTCGAAGG	NA	False	NA	NA	False	NA	NA	NA	101200711	101187326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_101190440_101200513
ENSMUSG00000051223.15_58432291_58445712_1	chr1	+	2842	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	234	800	0	-800	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	3454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTATAGATCAGTCTTT	891	False	NA	23	True	AATAAA	-18	NA	58432290	58445712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUSG00000051223.15_58432291_58446513_1	chr1	+	3643	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	234	-1	0	1	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	4554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGTGTCTGTGCTTTA	891	False	NA	14	True	NA	NA	NA	58432290	58446513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUSG00000051225.10_57849090_57874102_1	chr15	+	2264	5	NNC	ENSMUSG00000051225.10	novel	2876	4	NA	NA	-216	-303	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.11737237261468	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCCCTGGACCTGATGG	9488	False	NA	NA	False	NA	NA	NA	57849089	57874102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_57849361_57849394_57849938_57856302_57856471_57858609_57858735_57872945
ENSMUSG00000051234.7_96352990_96360641_1	chr9	-	1145	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	87	0	0	0	multi-exon	FALSE	canonical	3	1085	junction_1	10	7275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTCTTTATTTGGCGGT	3800	False	NA	0	True	ATTAAA	-35	NA	96360641	96352989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_96353906_96356010_96356059_96360460
ENSMUSG00000051234.7_96353405_96360644_1	chr9	-	733	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	84	415	-3	411	multi-exon	FALSE	canonical	3	1085	junction_1	10	2781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCCTAATCCTTTTTGT	3797	False	NA	1	True	AATAAA	-18	NA	96360644	96353404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_96353906_96356010_96356059_96360460
ENSMUSG00000051235.11_11290932_11315799_1	chr12	-	3289	14	FSM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-32	2011	-1	639	multi-exon	FALSE	canonical	3	36	junction_2	6.04323672043149	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTTGAAATGTCTTTA	NA	False	NA	NA	False	AATATA	-17	NA	11315799	11290931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ENSMUSG00000051256.11_113419571_113425173_1	chr6	+	975	2	NNC	ENSMUSG00000051256.11	novel	1147	2	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_1	0	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAAGACTGTCCTGTGCCT	NA	False	NA	16	True	AATAAA	-20	NA	113419570	113425173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_113419591_113424218
ENSMUSG00000051257.4_138234607_138238918_1	chrX	+	1003	3	FSM	ENSMUSG00000051257.4	ENSMUST00000054534.4	1178	3	175	0	175	0	multi-exon	FALSE	canonical	3	2592	junction_2	198.5	13062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGTTTCACGTTAACGT	NA	False	NA	20	True	AATAAA	-21	NA	138234606	138238918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_138235157_138237570_138237800_138238694
ENSMUSG00000051316.9_37775075_37777257_1	chr18	-	1764	2	NNC	ENSMUSG00000051316.9	novel	3302	2	NA	NA	0	-1531	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGTTGTTCTATGAAT	NA	False	NA	-2	True	AATAAA	-21	NA	37777257	37775074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_37776575_37776993
ENSMUSG00000051319.7_127633666_127634408_1	chr2	-	442	2	FSM	ENSMUSG00000051319.7	ENSMUST00000135091.2	800	2	0	358	0	-358	multi-exon	FALSE	canonical	3	537	junction_1	0	3936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATCTTTTTCCTCCTC	NA	False	NA	-11	True	AATAAA	-13	NA	127634408	127633665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_127633753_127634053
ENSMUSG00000051329.14_90509729_90514641_1	chr2	+	612	3	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2170	52031	2170	-8223	internal_fragment	FALSE	canonical	3	579	junction_2	41.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCACAGAGTACTTGCCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	90509728	90514641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_90509853_90510115_90510228_90514265
ENSMUSG00000051329.14_90509729_90524583_1	chr2	+	1509	9	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2170	42089	2170	0	internal_fragment	FALSE	canonical	3	521	junction_6	48.3806521245839	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGAATTAGTATGATTA	NA	False	NA	NA	False	AATAAA	-11	NA	90509728	90524583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175
ENSMUSG00000051329.14_90509729_90539256_1	chr2	+	2458	20	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2170	27416	2170	6455	internal_fragment	FALSE	canonical	3	459	junction_11	48.9267075806398	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAAGCCAAACTGGATTG	NA	False	NA	NA	False	AAGAAA	-39	NA	90509728	90539256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166
ENSMUSG00000051329.14_90509729_90566672_1	chr2	+	5057	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2170	0	2170	0	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509728	90566672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ENSMUSG00000051329.14_90509736_90514816_1	chr2	+	780	3	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2177	51856	2177	-8048	internal_fragment	FALSE	canonical	3	579	junction_2	41.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTTTCTTTCAGAAAC	NA	False	NA	NA	False	GATAAA	-3	NA	90509735	90514816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_90509853_90510115_90510228_90514265
ENSMUSG00000051346.10_128045952_128047676_1	chr10	-	1408	2	FSM	ENSMUSG00000051346.10	ENSMUST00000061995.10	1583	2	0	175	0	-175	multi-exon	FALSE	canonical	3	299	junction_1	0	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGTGAAACAGTTGAATA	NA	False	NA	-7	True	AATAAA	-25	NA	128047676	128045951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128047261_128047577
ENSMUSG00000051355.19_22849764_22932090_1	chr11	-	588	3	FSM	ENSMUSG00000051355.19	ENSMUST00000159081.8	4508	3	292	3628	94	0	multi-exon	FALSE	canonical	3	2089	junction_1	53.5	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTGGGTAAAAAAGAG	NA	False	NA	-36	True	AATATA	-5	NA	22932090	22849763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_22850058_22906410_22906693_22932078
ENSMUSG00000051355.19_22849764_22932258_1	chr11	-	836	4	NNC	ENSMUSG00000051355.19	novel	1459	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	1024.12705374979	5484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTGGGTAAAAAAGAG	NA	False	NA	-36	True	AATATA	-5	NA	22932258	22849763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_22850058_22906152_22906233_22906410_22906693_22932078
ENSMUSG00000051355.19_22849764_22932258_2	chr11	-	756	3	FSM	ENSMUSG00000051355.19	ENSMUST00000159081.8	4508	3	124	3628	-6	0	multi-exon	FALSE	canonical	3	2089	junction_1	53.5	6721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTGGGTAAAAAAGAG	NA	False	NA	-36	True	AATATA	-5	NA	22932258	22849763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_22850058_22906410_22906693_22932078
ENSMUSG00000051379.13_140502122_140513370_1	chr2	-	1954	3	FSM	ENSMUSG00000051379.13	ENSMUST00000110057.3	3977	3	19	2004	0	-877	multi-exon	FALSE	canonical	3	47	junction_1	10.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTTCGAATGTACAACC	NA	False	NA	NA	False	NA	NA	NA	140513370	140502121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_140503672_140505180_140505380_140513165
ENSMUSG00000051379.13_140502438_140513370_1	chr2	-	1638	3	FSM	ENSMUSG00000051379.13	ENSMUST00000110057.3	3977	3	19	2320	0	-1193	multi-exon	FALSE	canonical	3	47	junction_1	10.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGGATCAGCGAACTACA	NA	False	NA	NA	False	ATTAAA	-14	NA	140513370	140502437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_140503672_140505180_140505380_140513165
ENSMUSG00000051391.10_135938326_135963453_1	chr5	-	2457	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	0	1063	0	-1063	multi-exon	FALSE	canonical	3	925	junction_1	0	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTAACTTGTCTTCAGA	NA	False	NA	NA	False	NA	NA	NA	135963453	135938325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_135940506_135963176
ENSMUSG00000051391.10_135939317_135963453_1	chr5	-	1466	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	0	2054	0	-2054	multi-exon	FALSE	canonical	3	925	junction_1	0	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGACAGGCTTAGAGTGGA	NA	False	NA	NA	False	TTTAAA	-9	NA	135963453	135939316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_135940506_135963176
ENSMUSG00000051469.15_24145325_24153397_1	chr18	-	3576	4	NIC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	-20	1657	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	102.009803450453	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTTGGAATTGCCTTAC	NA	False	NA	NA	False	AATAAA	-28	NA	24153397	24145324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_24147743_24150340_24150489_24150724_24151226_24152888
ENSMUSG00000051469.15_24145325_24153867_1	chr18	-	3166	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	0	2566	0	1657	multi-exon	FALSE	canonical	3	144	junction_3	47.8957200593122	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTTGGAATTGCCTTAC	NA	False	NA	NA	False	AATAAA	-28	NA	24153867	24145324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
ENSMUSG00000051506.18_32681504_32692840_1	chr14	-	1079	6	ISM	ENSMUSG00000051506.18	ENSMUST00000130509.10	10158	62	214183	0	52454	0	3prime_fragment	FALSE	canonical	3	12	junction_1	3.37045990927054	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTCTGGTTTCATCTGA	NA	False	NA	0	True	ATTAAA	-37	NA	32692840	32681503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_32681962_32682698_32682811_32686495_32686581_32688320_32688504_32689429_32689610_32692779
ENSMUSG00000051518.9_80144816_80148492_1	chr15	-	827	4	NNC	ENSMUSG00000051518.9	novel	838	4	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	383.503150791055	1773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAAGTGTGTGTGTGTG	NA	False	NA	-5	True	AATAAA	-25	NA	80148492	80144815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_80145332_80145497_80145596_80148183_80148319_80148414
ENSMUSG00000051557.16_155906980_155976183_1	chr4	-	1357	9	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	0	65356	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	117.805387716352	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAACAAAACAAAACA	9135	False	NA	NA	False	NA	NA	NA	155976183	155906979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_155907143_155973312_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
ENSMUSG00000051557.16_155906980_155976183_2	chr4	-	1475	8	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	0	65356	intron_retention	FALSE	canonical	0	0	junction_1	125.938760628217	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAACAAAACAAAACA	9135	False	NA	NA	False	NA	NA	NA	155976183	155906979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_155907143_155973312_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975873_155976087
ENSMUSG00000051557.16_155973319_155976183_1	chr4	-	1371	8	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	118.182321962677	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9135	False	NA	NA	False	AATAAA	-14	NA	155976183	155973318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_155973626_155973890_155974054_155974125_155974364_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
ENSMUSG00000051557.16_155973319_155976183_2	chr4	-	1247	8	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	119.008660291971	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9135	False	NA	NA	False	AATAAA	-14	NA	155976183	155973318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976028
ENSMUSG00000051557.16_155973319_155976230_1	chr4	-	2010	7	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	293	junction_5	37.4985184892535	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9088	False	NA	NA	False	AATAAA	-14	NA	155976230	155973318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
ENSMUSG00000051579.11_135070830_135072950_1	chrX	-	1109	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	141	0	0	0	multi-exon	FALSE	canonical	3	703	junction_2	29	3454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGGTTAAGACTTGGTC	NA	False	NA	NA	False	NA	NA	NA	135072950	135070829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135071799_135072384_135072455_135072880
ENSMUSG00000051579.11_135071073_135072950_1	chrX	-	866	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	141	243	0	-243	multi-exon	FALSE	canonical	3	703	junction_2	29	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGTGGTGTGTTTT	NA	False	NA	-14	True	NA	NA	NA	135072950	135071072	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135071799_135072384_135072455_135072880
ENSMUSG00000051579.11_135071308_135072950_1	chrX	-	631	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	141	478	0	326	multi-exon	FALSE	canonical	3	703	junction_2	29	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTTATGTAGTTTCG	NA	False	NA	-13	True	NA	NA	NA	135072950	135071307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135071799_135072384_135072455_135072880
ENSMUSG00000051639.4_6171336_6172498_1	chr17	-	685	2	Genic_Genomic	ENSMUSG00000051639.4	novel	957	1	NA	NA	-59	147	multi-exon	TRUE	non_canonical	0	0	junction_1	0	725	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATCCTAGCTGCCTGGA	NA	False	NA	NA	False	NA	NA	NA	6172498	6171335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_-_6171856_6172333
ENSMUSG00000051639.4_6171336_6172498_2	chr17	-	692	2	Genic_Genomic	ENSMUSG00000051639.4	novel	957	1	NA	NA	-59	147	multi-exon	FALSE	non_canonical	0	0	junction_1	0	926	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATCCTAGCTGCCTGGA	NA	False	NA	NA	False	NA	NA	NA	6172498	6171335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_-_6171863_6172333
ENSMUSG00000051639.4_6171336_6172498_3	chr17	-	228	2	Genic_Genomic	ENSMUSG00000051639.4	novel	957	1	NA	NA	-59	147	multi-exon	FALSE	canonical	0	0	junction_1	0	171	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATCCTAGCTGCCTGGA	NA	False	NA	NA	False	NA	NA	NA	6172498	6171335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_-_6171495_6172429
ENSMUSG00000051639.4_6171336_6172498_4	chr17	-	680	2	Genic_Genomic	ENSMUSG00000051639.4	novel	957	1	NA	NA	-59	147	multi-exon	FALSE	non_canonical	0	0	junction_1	0	786	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATCCTAGCTGCCTGGA	NA	False	NA	NA	False	NA	NA	NA	6172498	6171335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_-_6171859_6172341
ENSMUSG00000051650.12_22784747_22810488_1	chr11	-	2720	2	FSM	ENSMUSG00000051650.12	ENSMUST00000055549.4	2602	2	0	-118	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACGTATAATAAGTGATAC	3582	False	NA	-28	True	AATAAA	-21	NA	22810488	22784746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_22787196_22810217
ENSMUSG00000051650.12_22809868_22811264_1	chr11	-	1137	2	NNC	ENSMUSG00000051650.12	novel	2602	2	NA	NA	-303	-23285	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGGAGGGTTCGAGTTCG	2806	False	NA	NA	False	NA	NA	NA	22811264	22809867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_22810580_22810839
ENSMUSG00000051695.7_86501474_86503155_1	chr6	-	838	2	Genic_Genomic	ENSMUSG00000051695.7	novel	1830	1	NA	NA	148	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTATTTGAAAGCTGGG	NA	False	NA	-32	True	ATTAAA	-22	NA	86503155	86501473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_86502277_86503120
ENSMUSG00000051705.14_59643753_59657921_1	chr9	-	1553	3	FSM	ENSMUSG00000051705.14	ENSMUST00000163586.9	3570	3	0	2017	0	0	multi-exon	FALSE	canonical	3	14	junction_2	2.5	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGGTGTGTGGTGCA	6429	False	NA	-22	True	AATAAA	-15	NA	59657921	59643752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_59645152_59647222_59647316_59657860
ENSMUSG00000051705.14_59643753_59657921_2	chr9	-	1460	2	FSM	ENSMUSG00000051705.14	ENSMUST00000051039.5	3682	2	11	2211	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGGTGTGTGGTGCA	6429	False	NA	-22	True	AATAAA	-15	NA	59657921	59643752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_59645152_59657860
ENSMUSG00000051705.14_59643753_59657921_3	chr9	-	1572	3	FSM	ENSMUSG00000051705.14	ENSMUST00000213257.2	764	3	-16	-792	0	0	multi-exon	FALSE	canonical	1	1	junction_2	9	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGGTGTGTGGTGCA	6429	False	NA	-22	True	AATAAA	-15	NA	59657921	59643752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_59645152_59647222_59647335_59657860
ENSMUSG00000051730.16_69691967_69701854_1	chr2	-	1691	12	NIC	ENSMUSG00000051730.16	novel	968	7	NA	NA	2540	9575	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	1568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAAAGATGGGGGCTTTC	3666	False	NA	NA	False	NA	NA	NA	69701854	69691966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_69692084_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ENSMUSG00000051730.16_69701562_69715943_1	chr2	-	930	7	NNC	ENSMUSG00000051730.16	novel	968	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	207.389327915718	2182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAACTACTTGTCTCTA	6822	False	NA	-25	True	AATAAA	-14	NA	69715943	69701561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_69701661_69702075_69702126_69704227_69704280_69709445_69709523_69711106_69711293_69711640_69711756_69715592
ENSMUSG00000051730.16_69701562_69715943_2	chr2	-	880	6	NIC	ENSMUSG00000051730.16	novel	968	7	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	228.92933407495	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAACTACTTGTCTCTA	6822	False	NA	-25	True	AATAAA	-14	NA	69715943	69701561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_69701661_69702075_69702126_69709445_69709529_69711110_69711293_69711640_69711756_69715592
ENSMUSG00000051730.16_69710866_69715943_1	chr2	-	893	3	ISM	ENSMUSG00000051730.16	ENSMUST00000135487.2	2090	4	5	2774	-2	-2774	5prime_fragment	FALSE	canonical	3	609	junction_2	8.5	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTAGAACCTGGATTT	6822	False	NA	NA	False	TATAAA	-18	NA	69715943	69710865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_69711293_69711640_69711756_69715592
ENSMUSG00000051735.8_28495442_28498379_1	chr7	+	2065	5	ISM	ENSMUSG00000051735.8	ENSMUST00000209035.2	2898	12	7048	0	-921	0	3prime_fragment	FALSE	canonical	3	40	junction_1	3.11247489949718	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACGAGCAATGGAGGTGC	NA	False	NA	3	True	AATAAA	-13	NA	28495441	28498379	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_28495772_28496077_28496372_28496534_28496667_28496984_28497149_28497234
ENSMUSG00000051768.10_24246626_24272863_1	chr7	+	2095	17	NNC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	98.0929884089582	1088	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGTTTCTCTCTTAGGAG	NA	False	NA	7	True	AATAAA	-19	NA	24246625	24272863	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269882_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ENSMUSG00000051811.15_4754791_4756022_2	chr7	-	477	4	NNC	ENSMUSG00000051811.15	novel	553	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	347.808695821265	4179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756022	4754790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_4754975_4755059_4755161_4755722_4755849_4755956
ENSMUSG00000051811.15_4754791_4756022_3	chr7	-	367	3	NIC	ENSMUSG00000051811.15	novel	490	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	322	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756022	4754790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_4754975_4755059_4755172_4755951
ENSMUSG00000051811.15_4754791_4756022_5	chr7	-	1129	2	NIC	ENSMUSG00000051811.15	novel	435	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	803	junction_1	0	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756022	4754790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_4755849_4755951
ENSMUSG00000051811.15_4754791_4756022_6	chr7	-	433	4	NNC	ENSMUSG00000051811.15	novel	435	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	378.537830195198	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756022	4754790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_4754969_4755102_4755161_4755722_4755849_4755951
ENSMUSG00000051827.12_36508651_36513343_1	chrX	+	939	3	NIC	ENSMUSG00000051827.12	novel	735	5	NA	NA	0	4	intron_retention	FALSE	canonical	3	47	junction_2	1.5	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTGTTTTGTGCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	36508650	36513343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_36509314_36510828_36510875_36513113
ENSMUSG00000051855.16_30738054_30747618_1	chr6	+	1713	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	5	843	0	-843	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGTGAGGGAGGAGCTT	2	True	NA	NA	False	ATTAAA	-43	NA	30738053	30747618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ENSMUSG00000051855.16_30748411_30873687_1	chr6	+	2702	20	NIC	ENSMUSG00000051855.16	novel	2665	13	NA	NA	6323	125223	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGAGCGGAAGACGCTGCA	586	False	NA	NA	False	NA	NA	NA	30748410	30873687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ENSMUSG00000051950.11_149601695_149683348_1	chr5	+	1854	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	0	2716	0	-724	multi-exon	FALSE	canonical	3	479	junction_13	51.6933659344471	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGTTTTCTCCATTG	NA	False	NA	19	True	AATAAA	-15	NA	149601694	149683348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ENSMUSG00000051977.17_15773486_15784616_1	chr17	-	1433	10	NIC	ENSMUSG00000051977.17	novel	1447	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	3.23178657161089	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAACAAGCATTTCTATA	NA	False	NA	NA	False	AATAAA	-26	NA	15784616	15773485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_15773808_15774949_15775018_15775348_15775621_15775827_15775930_15777562_15777720_15779284_15779335_15782676_15782785_15783075_15783200_15783482_15783594_15784497
ENSMUSG00000051978.10_14077561_14140318_1	chr8	-	1638	6	NNC	ENSMUSG00000051978.10	novel	1557	6	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	79.7696684210233	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATATTTGTGATAAGATT	NA	False	NA	-6	True	AATAAA	-18	NA	14140318	14077560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140176
ENSMUSG00000052033.14_170353365_170360782_1	chr2	+	464	4	FSM	ENSMUSG00000052033.14	ENSMUST00000063682.12	935	4	210	261	0	0	multi-exon	FALSE	canonical	3	676	junction_1	80.8469060769936	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTTCCCTTCTCCAAA	4052	False	NA	10	True	AATAAA	-20	NA	170353364	170360782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_170353390_170357658_170357767_170358469_170358611_170360592
ENSMUSG00000052033.14_170353365_170360987_1	chr2	+	669	4	FSM	ENSMUSG00000052033.14	ENSMUST00000063682.12	935	4	210	56	0	0	multi-exon	FALSE	canonical	3	676	junction_1	80.8469060769936	3237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTCTCTATATTATTAT	4052	False	NA	12	True	ATTAAA	-15	NA	170353364	170360987	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_170353390_170357658_170357767_170358469_170358611_170360592
ENSMUSG00000052102.16_38460603_38472029_1	chr18	-	2268	7	NNC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	474.624764068065	2572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTTTGTGAATTTTG	NA	False	NA	-22	True	AATAAA	-2	NA	38472029	38460602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471270_38471956
ENSMUSG00000052105.18_66654961_66669776_1	chr17	-	1076	4	NNC	ENSMUSG00000052105.18	novel	2423	6	NA	NA	11883	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	102.924999662645	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGAAATTGTAGTACAGT	NA	False	NA	-5	True	AATAAA	-19	NA	66669776	66654960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_66655517_66661117_66661373_66665016_66665185_66669679
ENSMUSG00000052139.19_31855340_32242306_1	chr5	+	1381	11	NIC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	217.028131817053	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTCCTGAAGGCTTC	5864	False	NA	35	True	AATAAA	-31	NA	31855339	32242306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
ENSMUSG00000052139.19_31855340_32242306_2	chr5	+	1422	11	NIC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	219.541704466372	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTCCTGAAGGCTTC	5864	False	NA	35	True	AATAAA	-31	NA	31855339	32242306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32241924
ENSMUSG00000052139.19_31855340_32242306_3	chr5	+	1576	12	FSM	ENSMUSG00000052139.19	ENSMUST00000201352.4	1888	12	312	0	0	0	multi-exon	FALSE	canonical	3	639	junction_9	56.490326824983	1986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTCCTGAAGGCTTC	5864	False	NA	35	True	AATAAA	-31	NA	31855339	32242306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
ENSMUSG00000052139.19_31855340_32242306_4	chr5	+	1501	11	NIC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_5	219.40148130767	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTCCTGAAGGCTTC	5864	False	NA	35	True	AATAAA	-31	NA	31855339	32242306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
ENSMUSG00000052144.9_100842931_100844963_1	chr6	+	1860	2	ISM	ENSMUSG00000052144.9	ENSMUST00000203580.2	1948	6	13393	-380	-156	380	3prime_fragment	FALSE	canonical	3	608	junction_1	0	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGAAATATTGGAGTACA	3775	False	NA	15	True	AATAAA	-9	NA	100842930	100844963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_100843045_100843217
ENSMUSG00000052146.17_27849396_27854214_1	chr17	-	578	6	FSM	ENSMUSG00000052146.17	ENSMUST00000114882.9	887	6	305	4	0	0	multi-exon	FALSE	canonical	3	4719	junction_5	828.025700084243	151481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCACTTGTGTATGTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	27854214	27849395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27854177
ENSMUSG00000052180.16_34063360_34089218_1	chr13	-	1829	7	FSM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	-65	-439	-65	439	multi-exon	FALSE	canonical	3	772	junction_6	71.5830908028488	2572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGCATCCATGTTGGT	NA	False	NA	NA	False	AATAAA	-21	NA	34089218	34063359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
ENSMUSG00000052241.4_47430838_47502993_1	chr6	-	3043	22	NIC	ENSMUSG00000052241.4	novel	543	2	NA	NA	-71739	-128	intron_retention	TRUE	non_canonical	0	0	junction_1	0	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACTTCTCGTGGAGACC	NA	False	NA	NA	False	NA	NA	NA	47502993	47430837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000052241.4_47430838_47503073_1	chr6	-	3123	22	NIC	ENSMUSG00000052241.4	novel	543	2	NA	NA	-71819	-128	intron_retention	FALSE	non_canonical	0	0	junction_1	0	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACTTCTCGTGGAGACC	NA	False	NA	NA	False	NA	NA	NA	47503073	47430837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000052241.4_47431062_47503001_1	chr6	-	2976	22	NNC	ENSMUSG00000052241.4	novel	543	2	NA	NA	-71747	-352	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	515	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGCGGCGGCGCGGGA	NA	False	NA	NA	False	AAGAAA	-18	NA	47503001	47431061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_47431113_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000052291.9_116321071_116417406_1	chr10	+	2859	17	NIC	ENSMUSG00000052291.9	novel	2229	4	NA	NA	-23886	-1748	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGGCTGCTGGGAGCAAG	6005	False	NA	NA	False	NA	NA	NA	116321070	116417406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417357
ENSMUSG00000052291.9_116321071_116417406_4	chr10	+	2731	16	NIC	ENSMUSG00000052291.9	novel	2229	4	NA	NA	-23886	-1748	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGGCTGCTGGGAGCAAG	6005	False	NA	NA	False	NA	NA	NA	116321070	116417406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385011_116417357
ENSMUSG00000052291.9_116321692_116417406_1	chr10	+	2238	17	NIC	ENSMUSG00000052291.9	novel	2229	4	NA	NA	-23265	-1748	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGGCTGCTGGGAGCAAG	6626	False	NA	NA	False	NA	NA	NA	116321691	116417406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417357
ENSMUSG00000052291.9_116321692_116417406_3	chr10	+	2110	16	NIC	ENSMUSG00000052291.9	novel	2229	4	NA	NA	-23265	-1748	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGGCTGCTGGGAGCAAG	6626	False	NA	NA	False	NA	NA	NA	116321691	116417406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385011_116417357
ENSMUSG00000052293.15_100787666_100792568_1	chr13	+	1209	3	NNC	ENSMUSG00000078941.10	novel	1298	5	NA	NA	179	1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	627	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTACTTTGGCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	100787665	100792568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_100787755_100790698_100790792_100791541
ENSMUSG00000052293.15_100787870_100792023_1	chr13	+	659	3	FSM	ENSMUSG00000078941.10	ENSMUST00000190729.2	1184	3	-18	543	0	-543	multi-exon	FALSE	canonical	3	1279	junction_2	251.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAAGTACTCCCACCCT	NA	False	NA	NA	False	NA	NA	NA	100787869	100792023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_100787954_100790698_100790792_100791541
ENSMUSG00000052293.15_100787870_100792568_2	chr13	+	1195	3	NNC	ENSMUSG00000078941.10	novel	1222	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	635.5	3501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTACTTTGGCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	100787869	100792568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_100787954_100790707_100790792_100791541
ENSMUSG00000052293.15_100787870_100793114_1	chr13	+	1750	3	FSM	ENSMUSG00000078941.10	ENSMUST00000084721.8	1222	3	19	-547	0	547	multi-exon	FALSE	canonical	3	1279	junction_2	251.5	3888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCTTTCTCATTATACA	NA	False	NA	NA	False	NA	NA	NA	100787869	100793114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_100787954_100790698_100790792_100791541
ENSMUSG00000052296.8_4634494_4635074_1	chr7	-	535	2	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	8088	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTGGGACTGTGA	303	False	NA	-3	True	AATAAA	-17	NA	4635074	4634493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_4634895_4634940
ENSMUSG00000052298.13_54608282_54678502_1	chr11	-	2916	5	NIC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_4	245.457735669504	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTGGATTTTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	54678502	54608281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54678385
ENSMUSG00000052298.13_54610160_54678502_1	chr11	-	1192	6	FSM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	-1	1878	-1	-1878	multi-exon	FALSE	canonical	3	549	junction_4	66.5263857428013	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTATGTATATTTTGAA	NA	False	NA	NA	False	NA	NA	NA	54678502	54610159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647231_54647386_54678385
ENSMUSG00000052299.10_87175554_87229451_1	chr16	-	5679	30	FSM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	49	2015	0	-2015	multi-exon	FALSE	canonical	3	140	junction_26	19.3535231547588	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTAAATTATAGAACTGAA	NA	False	NA	0	True	AATAAA	-21	NA	87229451	87175553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ENSMUSG00000052301.15_126450757_126461032_1	chr7	+	1995	7	NIC	ENSMUSG00000052301.15	novel	936	10	NA	NA	2788	9155	intron_retention	FALSE	non_canonical	0	0	junction_1	0	2230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACTTTGCAACGCCGTA	2847	False	NA	NA	False	NA	NA	NA	126450756	126461032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ENSMUSG00000052301.15_126450757_126461032_2	chr7	+	2087	8	NIC	ENSMUSG00000052301.15	novel	936	10	NA	NA	2788	9155	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1021	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACTTTGCAACGCCGTA	2847	False	NA	NA	False	NA	NA	NA	126450756	126461032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_126452164_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ENSMUSG00000052301.15_126451605_126460820_1	chr7	+	1014	7	NIC	ENSMUSG00000052301.15	novel	2538	11	NA	NA	3636	8943	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCCTCTCCGAGTTAGG	3695	False	NA	NA	False	NA	NA	NA	126451604	126460820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460797
ENSMUSG00000052301.15_126451605_126460975_1	chr7	+	1090	7	NIC	ENSMUSG00000052301.15	novel	2538	11	NA	NA	3636	9098	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCGGAGTAGAGTCCCGC	3695	False	NA	NA	False	NA	NA	NA	126451604	126460975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ENSMUSG00000052301.15_126451605_126460975_2	chr7	+	1182	8	NIC	ENSMUSG00000052301.15	novel	2538	11	NA	NA	3636	9098	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCGGAGTAGAGTCCCGC	3695	False	NA	NA	False	NA	NA	NA	126451604	126460975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_126452164_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ENSMUSG00000052301.15_126451605_126461032_1	chr7	+	1082	7	NIC	ENSMUSG00000052301.15	novel	2538	11	NA	NA	3636	9155	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACTTTGCAACGCCGTA	3695	False	NA	NA	False	NA	NA	NA	126451604	126461032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_126452164_126456397_126456515_126456847_126456895_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ENSMUSG00000052301.15_126451605_126461549_1	chr7	+	1408	8	Fusion	ENSMUSG00000042606.10_ENSMUSG00000052301.15	novel	2766	7	NA	NA	3636	-1027	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2016	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAAACTACTGTCGCTCGG	3695	False	NA	NA	False	NA	NA	NA	126451604	126461549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr7_+_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876_126461190_126461445
ENSMUSG00000052310.10_90155479_90159852_1	chr3	+	1297	4	FSM	ENSMUSG00000052310.10	ENSMUST00000015467.9	2364	4	0	1067	0	-1067	multi-exon	FALSE	canonical	3	126	junction_1	8.60232526704263	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAATAAGAGATAGCGAA	NA	False	NA	NA	False	NA	NA	NA	90155478	90159852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_90155567_90156252_90156471_90156632_90156764_90158992
ENSMUSG00000052334.12_41761473_41825778_1	chr14	+	1879	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	0	intron_retention	TRUE	canonical	3	21	junction_4	63.0672040146241	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	41761472	41825778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
ENSMUSG00000052334.12_41761473_41825778_2	chr14	+	1578	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	0	intron_retention	FALSE	canonical	3	16	junction_2	69.184937345896	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	41761472	41825778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_41761595_41761988_41762060_41766142_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
ENSMUSG00000052337.16_71808363_71851690_1	chr6	+	2127	14	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	174	combination_of_known_junctions	FALSE	canonical	3	21	junction_10	424.422768463866	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATACATTTAAATTGCTC	NA	False	NA	-13	True	NA	NA	NA	71808362	71851690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000052337.16_71808363_71852241_2	chr6	+	2678	14	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_10	424.422768463866	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808362	71852241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000052337.16_71808363_71852241_4	chr6	+	2692	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	429.104185911608	1522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808362	71852241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845549_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000052337.16_71808363_71852241_5	chr6	+	2690	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	429.104185911608	1480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808362	71852241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000052337.16_71808363_71852241_6	chr6	+	2657	14	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	457.116069058741	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808362	71852241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000052369.9_97862138_97868156_1	chr15	+	1417	8	NIC	ENSMUSG00000052369.9	novel	1623	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	50.2548606644985	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCACTGTCTCTGACTGC	7708	False	NA	11	True	AATAAA	-17	NA	97862137	97868156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_97862206_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
ENSMUSG00000052374.17_12284312_12293840_1	chr13	-	1075	7	ISM	ENSMUSG00000052374.17	ENSMUST00000168193.8	2920	22	61765	-9	3593	0	3prime_fragment	FALSE	canonical	3	42	junction_5	11.7473401244707	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGACAAACTTTATTAAG	NA	False	NA	3	True	AATAAA	-29	NA	12293840	12284311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_12284539_12285663_12285823_12287584_12287651_12289963_12290111_12291248_12291429_12292284_12292420_12293679
ENSMUSG00000052397.9_7005674_7050183_1	chr17	-	2930	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	0	234	0	-234	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	1890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTGATTGCATGGG	NA	False	NA	-1	True	AATAAA	-14	NA	7050183	7005673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ENSMUSG00000052397.9_7006008_7050183_1	chr17	-	2596	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	0	568	0	-568	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCATGTAACCGAGACAC	NA	False	NA	-9	True	AATAAA	-16	NA	7050183	7006007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ENSMUSG00000052406.15_26847835_26854336_2	chr2	-	1691	5	ISM	ENSMUSG00000052406.15	ENSMUST00000136710.2	1121	7	-45	3282	0	213	5prime_fragment	FALSE	canonical	3	152	junction_2	27.518175811634	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTGTTTTGCCTACCC	NA	False	NA	NA	False	NA	NA	NA	26854336	26847834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
ENSMUSG00000052419.8_13869799_13871465_1	chr6	-	1060	3	FSM	ENSMUSG00000052419.8	ENSMUST00000139231.2	3177	3	52	2065	0	0	multi-exon	FALSE	canonical	3	64	junction_2	22	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATTGTTTTGGTCTGCT	0	True	NA	NA	False	AATACA	-22	NA	13871465	13869798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_13870740_13871054_13871146_13871437
ENSMUSG00000052419.8_13869799_13871465_2	chr6	-	1065	3	NNC	ENSMUSG00000052419.8	novel	1077	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	53.5	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATTGTTTTGGTCTGCT	0	True	NA	NA	False	AATACA	-22	NA	13871465	13869798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_13870740_13871054_13871146_13871432
ENSMUSG00000052419.8_13869859_13871465_1	chr6	-	1000	3	FSM	ENSMUSG00000052419.8	ENSMUST00000139231.2	3177	3	52	2125	0	0	multi-exon	FALSE	canonical	3	64	junction_2	22	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATCTTCTCCTTGTGAG	0	True	NA	NA	False	AATAGA	-32	NA	13871465	13869858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_13870740_13871054_13871146_13871437
ENSMUSG00000052419.8_13869859_13871465_2	chr6	-	1005	3	NNC	ENSMUSG00000052419.8	novel	3177	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	53.5	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATCTTCTCCTTGTGAG	0	True	NA	NA	False	AATAGA	-32	NA	13871465	13869858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_13870740_13871054_13871146_13871432
ENSMUSG00000052419.8_13870125_13871465_2	chr6	-	734	3	FSM	ENSMUSG00000052419.8	ENSMUST00000139231.2	3177	3	52	2391	0	-125	multi-exon	FALSE	canonical	3	64	junction_2	22	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCCTCTTGCATTCTG	0	True	NA	-4	True	AGTAAA	-16	NA	13871465	13870124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_13870740_13871054_13871146_13871437
ENSMUSG00000052423.16_171097909_171104468_1	chr1	+	1955	9	NNC	ENSMUSG00000052423.16	novel	1998	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	46	junction_8	69.4041605381118	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTGTGATTTCTGCA	NA	False	NA	15	True	AATAAA	-15	NA	171097908	171104468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_171097985_171098772_171098944_171099276_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678_171104391_171104422
ENSMUSG00000052428.11_167136305_167158355_1	chr1	+	1207	7	NNC	ENSMUSG00000052428.11	novel	3966	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	199.900530820261	2575	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTCCTGTTCAAAA	NA	False	NA	16	True	AATAAA	-23	NA	167136304	167158355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_167136503_167136874_167136953_167141675_167141736_167143820_167143859_167146830_167146899_167153444_167153590_167157735
ENSMUSG00000052446.18_72704924_72723230_1	chr8	+	1753	4	FSM	ENSMUSG00000052446.18	ENSMUST00000138304.8	2307	4	14	540	0	-540	multi-exon	FALSE	canonical	3	16	junction_2	188.733203814862	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGGAATAGCTGGATT	NA	False	NA	NA	False	NA	NA	NA	72704923	72723230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_72705005_72719637_72719761_72719943_72720005_72721742
ENSMUSG00000052446.18_72704924_72723573_1	chr8	+	2096	4	FSM	ENSMUSG00000052446.18	ENSMUST00000138304.8	2307	4	14	197	0	-197	multi-exon	FALSE	canonical	3	16	junction_2	188.733203814862	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTTTTCTTAGCCAAAG	NA	False	NA	NA	False	NA	NA	NA	72704923	72723573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_72705005_72719637_72719761_72719943_72720005_72721742
ENSMUSG00000052446.18_72707291_72723573_1	chr8	+	2251	4	FSM	ENSMUSG00000052446.18	ENSMUST00000151168.2	698	4	0	-1553	0	-197	multi-exon	FALSE	canonical	3	39	junction_1	148.102066907327	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTTTTCTTAGCCAAAG	NA	False	NA	NA	False	NA	NA	NA	72707290	72723573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_72707523_72719637_72719765_72719943_72720005_72721742
ENSMUSG00000052446.18_72707291_72724177_1	chr8	+	2855	4	FSM	ENSMUSG00000052446.18	ENSMUST00000151168.2	698	4	0	-2157	0	0	multi-exon	FALSE	canonical	3	39	junction_1	148.102066907327	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72707290	72724177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_72707523_72719637_72719765_72719943_72720005_72721742
ENSMUSG00000052456.10_85744560_85751910_1	chr8	-	1321	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	109	junction_5	750.461950327189	3793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8400	False	NA	-4	True	AATAAA	-14	NA	85751910	85744559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746603_85750806_85750955_85751733
ENSMUSG00000052456.10_85744560_85751910_2	chr8	-	239	2	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8400	False	NA	-4	True	AATAAA	-14	NA	85751910	85744559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_85744763_85751874
ENSMUSG00000052456.10_85744560_85751910_3	chr8	-	540	3	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1046.5	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8400	False	NA	-4	True	AATAAA	-14	NA	85751910	85744559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_85744771_85750802_85750955_85751733
ENSMUSG00000052456.10_85744560_85751910_4	chr8	-	1250	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	82	junction_6	733.905628962077	3799	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8400	False	NA	-4	True	AATAAA	-14	NA	85751910	85744559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750949_85751733
ENSMUSG00000052459.14_43905765_43959404_1	chr16	-	3970	15	FSM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	264	0	-23	0	multi-exon	FALSE	canonical	3	337	junction_14	44.4035299203538	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTTCCCTTTTTATT	NA	False	NA	0	True	AATAAA	-18	NA	43959404	43905764	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
ENSMUSG00000052459.14_43905765_43959404_2	chr16	-	3984	15	FSM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	155	-243	-23	0	multi-exon	FALSE	canonical	3	151	junction_14	86.121532541792	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTTCCCTTTTTATT	NA	False	NA	0	True	AATAAA	-18	NA	43959404	43905764	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959310
ENSMUSG00000052488.8_73197724_73214385_1	chr8	-	2427	8	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	7790	16609	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCCACCGCGCTCCACC	NA	False	NA	NA	False	NA	NA	NA	73214385	73197723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
ENSMUSG00000052488.8_73214333_73228979_1	chr8	-	3696	18	FSM	ENSMUSG00000052488.8	ENSMUST00000212991.2	3646	18	91	-141	0	0	multi-exon	FALSE	canonical	3	416	junction_13	64.9317448394025	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228979	73214332	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ENSMUSG00000052533.15_30176429_30207307_1	chr2	+	1526	15	ISM	ENSMUSG00000052533.15	ENSMUST00000133603.2	2511	23	-12	9391	0	-9391	5prime_fragment	FALSE	canonical	3	896	junction_14	138.623038989829	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACCCTCTAGGTAAGAAG	4868	False	NA	NA	False	NA	NA	NA	30176428	30207307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192
ENSMUSG00000052544.10_152909104_153065693_1	chr3	-	2352	3	NNC	ENSMUSG00000052544.10	novel	416	3	NA	NA	-134273	1899	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	46	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGCGTTGTTTTCTCTC	NA	False	NA	-4	True	AATAAA	-24	NA	153065693	152909103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_152911229_152912254_152912363_153065574
ENSMUSG00000052584.11_76770254_76777546_1	chr14	-	634	2	ISM	ENSMUSG00000052584.11	ENSMUST00000227076.2	865	5	16752	-2	16386	0	3prime_fragment	FALSE	canonical	3	106	junction_1	0	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCATGTGCGAGTTACC	NA	False	NA	-2	True	AATAAA	-18	NA	76777546	76770253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_76770687_76777345
ENSMUSG00000052593.17_21366415_21373608_1	chr12	-	782	5	NIC	ENSMUSG00000052593.17	novel	4423	19	NA	NA	5683	7095	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCAGGGCTGCGCCGGATG	3	True	NA	NA	False	NA	NA	NA	21373608	21366414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_21366514_21367376_21367430_21367898_21368048_21369770_21369933_21373289
ENSMUSG00000052593.17_21366415_21373608_2	chr12	-	894	6	NNC	ENSMUSG00000052593.17	novel	4423	19	NA	NA	5683	7095	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCAGGGCTGCGCCGGATG	3	True	NA	NA	False	NA	NA	NA	21373608	21366414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_21366514_21367376_21367430_21367898_21368048_21369770_21369923_21371334_21371457_21373289
ENSMUSG00000052593.17_21373812_21423524_1	chr12	-	4040	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	109	294	0	0	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATTGTCTTAATTGTAT	NA	False	NA	-7	True	TATAAA	-18	NA	21423524	21373811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ENSMUSG00000052593.17_21373812_21423633_1	chr12	-	4149	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	0	294	0	0	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATTGTCTTAATTGTAT	NA	False	NA	-7	True	TATAAA	-18	NA	21423633	21373811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ENSMUSG00000052609.10_76623340_76625816_1	chr12	+	2079	2	ISM	ENSMUSG00000052609.10	ENSMUST00000218427.2	4815	6	5016	1446	5016	0	3prime_fragment	FALSE	canonical	3	69	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	NA	False	NA	22	True	NA	NA	NA	76623339	76625816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_76624051_76624448
ENSMUSG00000052712.18_29487919_29520499_1	chr17	+	1199	8	FSM	ENSMUSG00000052712.18	ENSMUST00000234711.2	13859	8	120	12540	0	0	multi-exon	FALSE	canonical	3	31	junction_1	113.402479906656	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	468	False	NA	15	True	AATAAA	-16	NA	29487918	29520499	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29487977_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUSG00000052712.18_29487919_29520499_2	chr17	+	985	7	NIC	ENSMUSG00000052712.18	novel	1073	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	154.717753775491	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	468	False	NA	15	True	AATAAA	-16	NA	29487918	29520499	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_29487977_29501033_29501242_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUSG00000052712.18_29487919_29520499_3	chr17	+	868	7	NIC	ENSMUSG00000052712.18	novel	1073	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	129.043920171906	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	468	False	NA	15	True	AATAAA	-16	NA	29487918	29520499	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_29487977_29496830_29496922_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUSG00000052712.18_29487919_29520499_4	chr17	+	1024	8	NNC	ENSMUSG00000052712.18	novel	2756	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	119.832876821626	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	468	False	NA	15	True	AATAAA	-16	NA	29487918	29520499	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515617_29520424
ENSMUSG00000052712.18_29487919_29520499_5	chr17	+	1239	9	NIC	ENSMUSG00000052712.18	novel	2812	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	115.980332384418	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	468	False	NA	15	True	AATAAA	-16	NA	29487918	29520499	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_29487977_29496830_29496922_29501033_29501242_29501702_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUSG00000052724.8_114585904_114610917_1	chr9	+	915	6	Genic_Genomic	ENSMUSG00000052724.8	novel	965	3	NA	NA	-23264	-408	multi-exon	FALSE	non_canonical	0	0	junction_1	0	982	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGTGAAGCTGGGACGG	NA	False	NA	NA	False	NA	NA	NA	114585903	114610917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_114586099_114586176_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
ENSMUSG00000052738.15_73225635_73253890_1	chr6	+	1238	9	NNC	ENSMUSG00000052738.15	novel	1519	9	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	495.854502349227	6398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTGTGAAGACTTTTT	2585	False	NA	15	True	AATAAA	-19	NA	73225634	73253890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_73225737_73233153_73233258_73237457_73237575_73240797_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
ENSMUSG00000052738.15_73225635_73253890_2	chr6	+	1245	9	FSM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	270	4	0	3	multi-exon	FALSE	canonical	3	1222	junction_2	134.074081667562	6408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTGTGAAGACTTTTT	2585	False	NA	15	True	AATAAA	-19	NA	73225634	73253890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_73225737_73233153_73233258_73237457_73237575_73240790_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
ENSMUSG00000052748.15_151243450_151304084_1	chr1	-	2822	18	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	103	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_14	42.2765651215601	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTTTCCGTTTACT	NA	False	NA	0	True	AATAAA	-18	NA	151304084	151243449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ENSMUSG00000052752.16_24727824_24746797_1	chr17	-	2598	21	NIC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_19	108.442277272289	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746797	24727823	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737769_24738104_24738221_24746739
ENSMUSG00000052752.16_24727824_24746797_2	chr17	-	2546	21	NNC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	101.901373886715	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746797	24727823	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732297_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ENSMUSG00000052776.11_121014785_121045584_1	chr5	-	1422	7	Fusion	ENSMUSG00000066861.15_ENSMUSG00000052776.11	novel	1489	7	NA	NA	0	0	multi-exon	FALSE	canonical	3	294	junction_1	134.94618268859	2231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121045584	121014784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr5_-_121015091_121035242_121035270_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
ENSMUSG00000052776.11_121034782_121045584_1	chr5	-	1416	7	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	0	-463	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	253.677890684668	2215	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121045584	121034781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037363_121039932_121040118_121043658_121043948_121045356
ENSMUSG00000052776.11_121034782_121045584_2	chr5	-	1464	7	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	0	-463	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	226.213026444839	2196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121045584	121034781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_121035088_121035242_121035312_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
ENSMUSG00000052794.14_73214333_73228979_1	chr8	+	3729	18	NIC	ENSMUSG00000052794.14	novel	2887	8	NA	NA	2599	14134	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1098	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCACAGAAGCCGGCCGGA	NA	False	NA	NA	False	NA	NA	NA	73214332	73228979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ENSMUSG00000052798.14_117586529_117628610_1	chr10	-	3108	28	NNC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	174.862046350179	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATGAGAGTTTTCTCTT	NA	False	NA	-7	True	AATAAA	-26	NA	117628610	117586528	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610468_117612111_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ENSMUSG00000052798.14_117586665_117628610_1	chr10	-	2975	28	FSM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	0	139	0	-136	multi-exon	FALSE	canonical	3	716	junction_19	68.4831139760951	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTGTTTGTTTGTTTG	NA	False	NA	-20	True	AATATA	-15	NA	117628610	117586664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ENSMUSG00000052833.10_16054407_16121731_1	chr7	-	1514	10	FSM	ENSMUSG00000052833.10	ENSMUST00000210999.2	1254	10	0	-260	0	-248	multi-exon	FALSE	canonical	3	190	junction_1	915.179615373431	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGGAATCAATAGTTTT	NA	False	NA	-22	True	ATTAAA	-14	NA	16121731	16054406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_16054806_16061755_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ENSMUSG00000052833.10_16054407_16121731_2	chr7	-	1415	9	FSM	ENSMUSG00000052833.10	ENSMUST00000211741.2	1663	9	0	248	0	-248	multi-exon	FALSE	canonical	3	51	junction_1	1013.32101743475	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGGAATCAATAGTTTT	NA	False	NA	-22	True	ATTAAA	-14	NA	16121731	16054406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_16054806_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ENSMUSG00000052833.10_16060975_16121731_1	chr7	-	1901	9	NNC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1030.09875133407	4034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTGTCTCCTCTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	16121731	16060974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_16061855_16064532_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ENSMUSG00000052833.10_16060975_16121731_2	chr7	-	994	7	NNC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1151.36027038552	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTGTCTCCTCTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	16121731	16060974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_16061211_16093003_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ENSMUSG00000052833.10_16060975_16121731_3	chr7	-	650	5	NNC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1343.6004567951	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTGTCTCCTCTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	16121731	16060974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_16061026_16102429_16102577_16104211_16104386_16112289_16112402_16121565
ENSMUSG00000052833.10_16060975_16121731_4	chr7	-	1751	8	NIC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_2	1057.8876141073	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTGTCTCCTCTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	16121731	16060974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_16061855_16064537_16064608_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ENSMUSG00000052833.10_16060975_16121731_5	chr7	-	1891	9	NNC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1028.99968871472	4036	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTGTCTCCTCTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	16121731	16060974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102438_16102577_16104211_16104386_16112289_16112402_16121565
ENSMUSG00000052833.10_16060975_16121731_6	chr7	-	1888	9	NNC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1027.58880394835	4015	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTGTCTCCTCTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	16121731	16060974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112394_16121565
ENSMUSG00000052917.16_55895827_55946785_1	chr16	+	1013	7	FSM	ENSMUSG00000052917.16	ENSMUST00000049128.11	1130	7	0	117	0	2	multi-exon	FALSE	canonical	3	14	junction_6	9.3407708461347	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCCTTGCTAGCCCC	NA	False	NA	NA	False	ACTAAA	-19	NA	55895826	55946785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55944141_55944334_55946503
ENSMUSG00000052917.16_55895827_55959605_1	chr16	+	989	7	ISM	ENSMUSG00000052917.16	ENSMUST00000202000.2	3218	8	-16	2655	0	199	5prime_fragment	FALSE	canonical	3	17	junction_6	8.60232526704263	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACCTAAGTATGTATTTC	NA	False	NA	NA	False	AATAAA	-21	NA	55895826	55959605	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55944141_55944334_55959347
ENSMUSG00000052926.17_85684296_85692670_1	chr8	-	1010	8	NNC	ENSMUSG00000052926.17	novel	1006	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	392.969282696316	1674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	8253	False	NA	-8	True	AATAAA	-14	NA	85692670	85684295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692495
ENSMUSG00000052926.17_85684296_85692670_2	chr8	-	1017	8	FSM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	-30	1057	0	0	multi-exon	FALSE	canonical	3	1021	junction_5	82.5459674041917	4295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	8253	False	NA	-8	True	AATAAA	-14	NA	85692670	85684295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ENSMUSG00000052926.17_85684296_85696210_1	chr8	-	1765	10	FSM	ENSMUSG00000052926.17	ENSMUST00000109736.9	2981	10	159	1057	0	0	multi-exon	FALSE	canonical	3	62	junction_9	446.653979919331	4529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	4713	False	NA	-8	True	AATAAA	-14	NA	85696210	85684295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85695914
ENSMUSG00000052926.17_85696323_85727469_1	chr8	-	926	7	NNC	ENSMUSG00000052926.17	novel	2981	10	NA	NA	-31073	-3465	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	15153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGCCCTAGGCCGGAG	NA	False	NA	NA	False	NA	NA	NA	85727469	85696322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628_85700943_85727439
ENSMUSG00000052962.4_71792704_71800752_1	chr6	-	956	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	42	2723	-5	443	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	5992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACCTCCTCACTGTCTCC	NA	False	NA	-10	True	AATAAA	-15	NA	71800752	71792703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
ENSMUSG00000052962.4_71792919_71800752_1	chr6	-	744	4	NNC	ENSMUSG00000052962.4	novel	3721	4	NA	NA	-5	228	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	680.971365036739	5414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAATTTATTGTGCATTA	NA	False	NA	-25	True	ATTAAA	-30	NA	71800752	71792918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_71793272_71794588_71794732_71795647_71795843_71800699
ENSMUSG00000052962.4_71792919_71800752_2	chr6	-	741	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	42	2938	-5	228	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	5458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAATTTATTGTGCATTA	NA	False	NA	-25	True	ATTAAA	-30	NA	71800752	71792918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
ENSMUSG00000052997.16_33840113_33868000_1	chr7	-	2573	17	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	517.710490857342	3361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGCCCTAGTGGGTTT	NA	False	NA	0	True	AATAAA	-27	NA	33868000	33840112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_33840886_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ENSMUSG00000053040.14_66726202_66741953_1	chr9	-	1224	6	FSM	ENSMUSG00000053040.14	ENSMUST00000169282.8	5205	6	55	3926	-23	364	multi-exon	FALSE	canonical	2	9	junction_1	3.03315017762062	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGTAGCCCTTGTCTTT	NA	False	NA	-1	True	AGTAAA	-17	NA	66741953	66726201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736029_66740440_66740612_66741767
ENSMUSG00000053040.14_66726202_66742015_1	chr9	-	1164	6	FSM	ENSMUSG00000053040.14	ENSMUST00000057261.9	715	6	-85	-364	-7	364	multi-exon	FALSE	canonical	1	1	junction_5	5.41848687365763	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGTAGCCCTTGTCTTT	NA	False	NA	-1	True	AGTAAA	-17	NA	66742015	66726201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736029_66740440_66740612_66741889
ENSMUSG00000053062.17_84571011_84619774_1	chr16	+	1312	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	40	junction_7	1349.13685369572	4920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571010	84619774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84618147_84618191_84619674
ENSMUSG00000053062.17_84571166_84606874_1	chr16	+	1096	4	FSM	ENSMUSG00000053062.17	ENSMUST00000098407.3	1998	4	-108	1010	-108	-1010	multi-exon	FALSE	canonical	3	4189	junction_2	31.1555238547945	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTGTGTGGTCATATC	NA	False	NA	11	True	ATTAAA	-5	NA	84571165	84606874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231
ENSMUSG00000053062.17_84571166_84615587_1	chr16	+	3287	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-108	-4187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1453.68894575848	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGGCTAGAGCTGCATA	NA	False	NA	NA	False	AAGAAA	-15	NA	84571165	84615587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613639_84613691
ENSMUSG00000053062.17_84571166_84619774_1	chr16	+	1182	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-108	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1361.98577452189	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571165	84619774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613296_84618156_84618191_84619674
ENSMUSG00000053062.17_84571166_84619774_3	chr16	+	970	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-108	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1858.65795340485	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571165	84619774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84612056_84612157_84613153_84613275_84618147_84618191_84619674
ENSMUSG00000053062.17_84571166_84619774_4	chr16	+	1157	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-108	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_7	1349.13685369572	4151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571165	84619774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84618147_84618191_84619674
ENSMUSG00000053062.17_84571166_84619918_1	chr16	+	1314	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-108	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1361.98577452189	5230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAATGTCTGGTAATATT	NA	False	NA	32	True	ACTAAA	-32	NA	84571165	84619918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613275_84618147_84618191_84619674
ENSMUSG00000053062.17_84571274_84606874_1	chr16	+	988	4	FSM	ENSMUSG00000053062.17	ENSMUST00000098407.3	1998	4	0	1010	0	-1010	multi-exon	FALSE	canonical	3	4189	junction_2	31.1555238547945	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTGTGTGGTCATATC	NA	False	NA	11	True	ATTAAA	-5	NA	84571273	84606874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231
ENSMUSG00000053062.17_84571274_84619774_1	chr16	+	1074	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1361.98577452189	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571273	84619774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613296_84618156_84618191_84619674
ENSMUSG00000053062.17_84571274_84619774_2	chr16	+	1049	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_7	1349.13685369572	1664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571273	84619774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84618147_84618191_84619674
ENSMUSG00000053062.17_84571274_84619774_3	chr16	+	862	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1858.65795340485	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571273	84619774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84612056_84612157_84613153_84613275_84618147_84618191_84619674
ENSMUSG00000053062.17_84571274_84619774_4	chr16	+	1083	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1361.98577452189	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571273	84619774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613296_84618147_84618191_84619674
ENSMUSG00000053062.17_84571274_84619827_1	chr16	+	1115	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	0	53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1361.98577452189	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATGATCTCTAACTCA	NA	False	NA	43	True	AAGAAA	-25	NA	84571273	84619827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613275_84618147_84618191_84619674
ENSMUSG00000053062.17_84612138_84620047_1	chr16	+	556	4	NNC	ENSMUSG00000053062.17	novel	659	7	NA	NA	5843	129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1850.38128203051	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCTTATGTGTTCAGG	5641	False	NA	33	True	AATATA	-24	NA	84612137	84620047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_84612157_84613153_84613275_84618147_84618191_84619674
ENSMUSG00000053070.6_8021466_8042869_1	chr9	-	1844	7	FSM	ENSMUSG00000053070.6	ENSMUST00000065291.2	1592	7	-45	-207	-45	207	multi-exon	FALSE	canonical	2	5	junction_1	2.38047614284762	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAATTCTTATTATATA	-36	True	NA	NA	False	TTTAAA	-6	NA	8042869	8021465	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_8022546_8023900_8023968_8025962_8026136_8027101_8027269_8037460_8037537_8042409_8042492_8042670
ENSMUSG00000053080.11_7403266_7460637_1	chr19	+	2832	7	NIC	ENSMUSG00000053080.11	novel	4989	5	NA	NA	4873	57368	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	873	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGAGCCTGGACGCGCG	NA	False	NA	NA	False	NA	NA	NA	7403265	7460637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
ENSMUSG00000053091.17_66339706_66358983_1	chr7	+	1393	3	ISM	ENSMUSG00000053091.17	ENSMUST00000128486.8	1419	5	9	667	0	-667	intron_retention	FALSE	canonical	3	70	junction_2	8	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATAGTTTTTTATTACA	NA	False	NA	NA	False	AGTAAA	-18	NA	66339705	66358983	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_66339772_66345923_66346055_66357787
ENSMUSG00000053111.14_133391214_133482568_1	chr7	+	1274	11	NIC	ENSMUSG00000053111.14	novel	515	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_8	2.00249843945008	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTCATATGTGGTCTC	NA	False	NA	NA	False	AATACA	-14	NA	133391213	133482568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_133391287_133454894_133455073_133463831_133463957_133469846_133469929_133471006_133471082_133471750_133471817_133478476_133478643_133481607_133481752_133482000_133482079_133482172_133482218_133482326
ENSMUSG00000053119.12_71520876_71557154_2	chr6	+	698	5	NNC	ENSMUSG00000053119.12	novel	2654	6	NA	NA	0	351	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	174.56302586745	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCATTGTAAATGTCACA	NA	False	NA	10	True	AATAAA	-19	NA	71520875	71557154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71556961
ENSMUSG00000053119.12_71521337_71557154_1	chr6	+	1101	6	NIC	ENSMUSG00000053119.12	novel	347	4	NA	NA	0	351	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	151.398282685108	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCATTGTAAATGTCACA	NA	False	NA	10	True	AATAAA	-19	NA	71521336	71557154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_71521430_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ENSMUSG00000053158.11_80027512_80029789_1	chr7	-	940	5	ISM	ENSMUSG00000053158.11	ENSMUST00000206728.2	2707	18	7378	-9	395	0	3prime_fragment	FALSE	canonical	2	10	junction_1	2.77263412660235	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGGTGATATTGACATGT	NA	False	NA	-10	True	AATAAA	-14	NA	80029789	80027511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_80027823_80028289_80028413_80028525_80028684_80029358_80029483_80029565
ENSMUSG00000053219.16_22049420_22059682_1	chr10	+	1143	7	FSM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	0	131	0	-131	multi-exon	FALSE	canonical	3	64	junction_1	14.8286509463568	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAACACATTTTAAAATG	NA	False	NA	NA	False	AATAAA	-24	NA	22049419	22059682	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_22049436_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ENSMUSG00000053226.8_85542033_85558894_1	chr8	-	1226	2	FSM	ENSMUSG00000053226.8	ENSMUST00000238279.2	1369	2	144	-1	144	0	multi-exon	FALSE	canonical	3	24	junction_1	0	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCGTGCTTCTTTCTG	543	False	NA	1	True	CATAAA	-16	NA	85558894	85542032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_85543163_85558798
ENSMUSG00000053253.17_105496253_105546305_1	chr14	+	1860	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	245	427	0	0	multi-exon	TRUE	canonical	3	271	junction_7	54.1807255433901	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCCTCGTTTAGTGATT	NA	False	NA	6	True	AATAAA	-16	NA	105496252	105546305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
ENSMUSG00000053253.17_105496253_105546305_2	chr14	+	1630	8	FSM	ENSMUSG00000053253.17	ENSMUST00000138283.2	1695	8	65	0	0	0	multi-exon	FALSE	canonical	3	137	junction_7	99.9552961302691	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCCTCGTTTAGTGATT	NA	False	NA	6	True	AATAAA	-16	NA	105496252	105546305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545549
ENSMUSG00000053253.17_105496253_105546732_1	chr14	+	2287	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	245	0	0	0	multi-exon	FALSE	canonical	3	271	junction_7	54.1807255433901	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTATTTCTTGTATT	NA	False	NA	10	True	AATAAA	-17	NA	105496252	105546732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
ENSMUSG00000053263.4_3240439_3258668_2	chr11	-	2703	4	NIC	ENSMUSG00000053263.4	novel	2954	2	NA	NA	22510	14987	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTAGACCCAGCGGGGCAC	7732	False	NA	NA	False	AATAAA	-4	NA	3258668	3240438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_3241885_3243279_3243344_3249033_3249206_3257647
ENSMUSG00000053263.4_3241187_3259083_2	chr11	-	2370	4	NIC	ENSMUSG00000053263.4	novel	2954	2	NA	NA	22095	14239	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGTCATGTCCAAAGGGA	7317	False	NA	NA	False	NA	NA	NA	3259083	3241186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_3241885_3243279_3243344_3249033_3249206_3257647
ENSMUSG00000053286.12_151304418_151333912_1	chr1	+	2452	15	NIC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	47.2939138337512	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGACTGGGCTCGCGT	NA	False	NA	15	True	AATAAA	-16	NA	151304417	151333912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_151304682_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ENSMUSG00000053286.12_151304418_151333912_2	chr1	+	2624	15	FSM	ENSMUSG00000053286.12	ENSMUST00000065625.12	2749	15	125	0	0	0	multi-exon	FALSE	canonical	3	148	junction_10	24.5323609686038	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGACTGGGCTCGCGT	NA	False	NA	15	True	AATAAA	-16	NA	151304417	151333912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ENSMUSG00000053291.16_26867852_26878301_1	chr7	-	1088	7	NIC	ENSMUSG00000053291.16	novel	1372	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	262.193312907353	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCGGCCTCTGTCATT	NA	False	NA	-4	True	CATAAA	-16	NA	26878301	26867851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26878151
ENSMUSG00000053291.16_26867971_26878301_1	chr7	-	1050	8	FSM	ENSMUSG00000053291.16	ENSMUST00000093040.13	1192	8	20	122	0	-119	multi-exon	FALSE	canonical	3	670	junction_1	28.7402157263998	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCAGGGCCGTTTGGCC	NA	False	NA	NA	False	NA	NA	NA	26878301	26867970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
ENSMUSG00000053293.10_135398807_135404997_1	chr5	-	1588	10	NIC	ENSMUSG00000053293.10	novel	5580	13	NA	NA	18403	6188	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGCAAAACTCGGGCTGGC	NA	False	NA	NA	False	NA	NA	NA	135404997	135398806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ENSMUSG00000053293.10_135398807_135404997_2	chr5	-	1583	10	NNC	ENSMUSG00000053293.10	novel	5580	13	NA	NA	18403	6188	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	214	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGCAAAACTCGGGCTGGC	NA	False	NA	NA	False	NA	NA	NA	135404997	135398806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403042_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ENSMUSG00000053293.10_135398807_135404997_3	chr5	-	1711	11	NNC	ENSMUSG00000053293.10	novel	5580	13	NA	NA	18403	6188	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGCAAAACTCGGGCTGGC	NA	False	NA	NA	False	NA	NA	NA	135404997	135398806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402104_135402228_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ENSMUSG00000053293.10_135398807_135404997_4	chr5	-	1580	10	NIC	ENSMUSG00000053293.10	novel	5580	13	NA	NA	18403	6188	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGCAAAACTCGGGCTGGC	NA	False	NA	NA	False	NA	NA	NA	135404997	135398806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_135398931_135399044_135399168_135400094_135400270_135400359_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ENSMUSG00000053293.10_135398807_135405659_1	chr5	-	2250	10	NIC	ENSMUSG00000053293.10	novel	5580	13	NA	NA	17741	6188	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	593	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGCAAAACTCGGGCTGGC	NA	False	NA	NA	False	NA	NA	NA	135405659	135398806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ENSMUSG00000053293.10_135404995_135410581_1	chr5	-	2965	3	ISM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	12819	0	12819	0	3prime_fragment	FALSE	canonical	3	219	junction_1	1	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGAGTTTGCCCTTTATT	NA	False	NA	-5	True	AATAAA	-18	NA	135410581	135404994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_135407029_135407488_135407612_135409773
ENSMUSG00000053293.10_135404995_135410742_1	chr5	-	3126	3	ISM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	12658	0	12658	0	3prime_fragment	FALSE	canonical	3	219	junction_1	1	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGAGTTTGCCCTTTATT	NA	False	NA	-5	True	AATAAA	-18	NA	135410742	135404994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_135407029_135407488_135407612_135409773
ENSMUSG00000053293.10_135404995_135411165_1	chr5	-	3549	3	ISM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	12235	0	12235	0	3prime_fragment	FALSE	canonical	3	219	junction_1	1	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGAGTTTGCCCTTTATT	NA	False	NA	-5	True	AATAAA	-18	NA	135411165	135404994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_135407029_135407488_135407612_135409773
ENSMUSG00000053329.8_77997900_78005608_1	chr10	-	1368	7	NNC	ENSMUSG00000053329.8	novel	1378	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.0443787951957	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGTCTCAGGCCTTGTG	4139	False	NA	-2	True	AATAAA	-29	NA	78005608	77997899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_77998544_77999223_77999388_78000671_78000765_78003228_78003349_78004642_78004757_78005206_78005260_78005428
ENSMUSG00000053332.14_160862737_160863485_1	chr1	+	192	2	ISM	ENSMUSG00000053332.14	ENSMUST00000065709.12	530	4	-5	714	0	-714	5prime_fragment	FALSE	canonical	3	3576	junction_1	0	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGCTACTGGAAAGGGTT	NA	False	NA	NA	False	AAAACA	-18	NA	160862736	160863485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_160862765_160863321
ENSMUSG00000053332.14_160862737_160866109_1	chr1	+	446	10	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1774.59954794189	33351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862736	160866109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053332.14_160862737_160866109_2	chr1	+	894	10	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3085	junction_6	967.274955483792	1997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862736	160866109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053332.14_160862737_160866109_3	chr1	+	486	11	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1939.64689827814	34528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862736	160866109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160865060_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053332.14_160862737_160866109_4	chr1	+	431	9	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2347.09346852655	5684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862736	160866109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863827_160864389_160864427_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053332.14_160862737_160866109_5	chr1	+	280	6	NNC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2208.92040599022	1164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862736	160866109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160865795_160865843_160866026
ENSMUSG00000053332.14_160862737_160866109_6	chr1	+	419	9	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2269.71826445486	4546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862736	160866109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864389_160864427_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053333.16_86631550_86749108_1	chr1	+	671	6	ISM	ENSMUSG00000053333.16	ENSMUST00000065694.8	3085	21	-15	228706	0	-36719	5prime_fragment	FALSE	canonical	3	71	junction_5	16.0872620417522	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCAACACCAGTGGCCT	NA	False	NA	NA	False	NA	NA	NA	86631549	86749108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943
ENSMUSG00000053338.10_3537587_3582129_1	chr7	-	905	6	NNC	ENSMUSG00000053338.10	novel	1535	6	NA	NA	-30989	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.7467330487208	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCCTTTTTACGTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	3582129	3537586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_3537738_3544441_3544508_3545190_3545488_3545940_3546232_3546711_3546748_3582065
ENSMUSG00000053358.3_120634050_120676058_1	chr7	-	1441	5	Genic_Genomic	ENSMUSG00000053358.3	novel	1845	1	NA	NA	-41739	-1575	multi-exon	FALSE	non_canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCAACAGTCTCATCGGG	NA	False	NA	NA	False	NA	NA	NA	120676058	120634049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675352
ENSMUSG00000053367.16_6263339_6284860_1	chr7	+	877	6	NNC	ENSMUSG00000053367.16	novel	684	11	NA	NA	-196	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.6189816407803	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATTCAGTGCGTATT	3016	False	NA	8	True	AATAAA	-23	NA	6263338	6284860	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_6263608_6275974_6276002_6277345_6277373_6280418_6280541_6282412_6282451_6284466
ENSMUSG00000053367.16_6263339_6284860_2	chr7	+	924	9	NNC	ENSMUSG00000053367.16	novel	957	16	NA	NA	-196	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	26.4952825989835	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATTCAGTGCGTATT	3016	False	NA	8	True	AATAAA	-23	NA	6263338	6284860	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_6263544_6266905_6266933_6269287_6269345_6269828_6269856_6275974_6276002_6277345_6277373_6280418_6280541_6282412_6282451_6284466
ENSMUSG00000053367.16_6263339_6284860_4	chr7	+	847	6	NNC	ENSMUSG00000053367.16	novel	684	11	NA	NA	-196	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.4854063446758	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATTCAGTGCGTATT	3016	False	NA	8	True	AATAAA	-23	NA	6263338	6284860	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_6263544_6266905_6266967_6277345_6277373_6280418_6280541_6282412_6282451_6284466
ENSMUSG00000053388.11_135380765_135396859_1	chr5	+	1970	7	NNC	ENSMUSG00000053388.11	novel	1803	6	NA	NA	-1384	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	2.86744175568088	65	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGCTTCCCAACTTG	NA	False	NA	NA	False	AATAAA	-4	NA	135380764	135396859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_135380916_135382136_135382549_135387708_135387805_135392581_135392813_135392903_135392927_135395394_135395520_135395927
ENSMUSG00000053398.12_98220486_98247306_1	chr3	-	1885	12	NNC	ENSMUSG00000053398.12	novel	1893	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	540.249743289126	12260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTCTGTGTGATCAT	NA	False	NA	-2	True	AGTAAA	-16	NA	98247306	98220485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223843_98226931_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
ENSMUSG00000053411.17_79800008_79816717_1	chr15	-	2763	7	FSM	ENSMUSG00000053411.17	ENSMUST00000109616.9	2899	7	136	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	127.989582909444	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79816717	79800007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ENSMUSG00000053411.17_79800008_79855324_1	chr15	-	2986	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	148.84294481843	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855324	79800007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_79802252_79802440_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ENSMUSG00000053442.5_66873440_66994918_1	chr6	-	708	4	NIC	ENSMUSG00000053442.5	novel	984	2	NA	NA	-121413	-1802	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCGGGACCGCCCGACC	NA	False	NA	NA	False	NA	NA	NA	66994918	66873439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_66873500_66891436_66891495_66992708_66992828_66994447
ENSMUSG00000053442.5_66873440_66994918_2	chr6	-	773	5	NIC	ENSMUSG00000053442.5	novel	984	2	NA	NA	-121413	-1802	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCGGGACCGCCCGACC	NA	False	NA	NA	False	NA	NA	NA	66994918	66873439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_66873512_66891436_66891495_66920808_66920862_66992708_66992828_66994447
ENSMUSG00000053453.10_8508486_8520749_1	chr14	+	1087	9	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	287.160125191504	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508485	8520749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_8508579_8512131_8512284_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUSG00000053453.10_8508551_8520749_1	chr14	+	1022	9	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	287.160125191504	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508550	8520749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_8508579_8512131_8512284_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUSG00000053470.14_71566021_71586123_1	chr6	-	3186	17	NIC	ENSMUSG00000053470.14	novel	4753	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_16	78.1394736592844	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCTGTTCTTTGTCCTTT	NA	False	NA	-17	True	ATTAAA	-19	NA	71586123	71566020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71585988
ENSMUSG00000053470.14_71588489_71609903_1	chr6	-	1714	11	ISM	ENSMUSG00000053470.14	ENSMUST00000065509.11	4816	27	-14	22533	-14	241	5prime_fragment	FALSE	canonical	3	176	junction_2	27.3512339758191	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGTTTCACATCTCAA	NA	False	NA	NA	False	AATAAA	-11	NA	71609903	71588488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ENSMUSG00000053477.19_69811009_69816269_1	chr18	+	685	4	ISM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	84950	247	-1761	0	3prime_fragment	FALSE	canonical	3	57	junction_1	39.4067112163511	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTATGAATCGCAGACG	NA	False	NA	37	True	AATATA	-13	NA	69811008	69816269	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_+_69811201_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053477.19_69811009_69816609_1	chr18	+	1025	4	ISM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	84950	-93	-1761	89	3prime_fragment	FALSE	canonical	3	57	junction_1	39.4067112163511	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACATGAACGTTTTTGTTG	NA	False	NA	NA	False	AAAAAG	-18	NA	69811008	69816609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_+_69811201_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053477.19_69811009_69816844_1	chr18	+	1260	4	ISM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	84950	-328	-1761	140	3prime_fragment	FALSE	canonical	3	57	junction_1	39.4067112163511	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTTGATTTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	69811008	69816844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_+_69811201_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053477.19_69811009_69816929_1	chr18	+	1333	4	ISM	ENSMUSG00000053477.19	ENSMUST00000202474.4	1810	13	65494	-660	-1761	225	3prime_fragment	FALSE	canonical	3	43	junction_1	45.7626728046147	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGATTTTTTTTTTTGTC	NA	False	NA	NA	False	AAGAAA	-15	NA	69811008	69816929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr18_+_69811189_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053510.13_108918852_108975219_1	chr4	+	2585	20	NIC	ENSMUSG00000053510.13	novel	4179	29	NA	NA	2664	56245	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGCCCTCCCCCGCCCTC	NA	False	NA	NA	False	NA	NA	NA	108918851	108975219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ENSMUSG00000053510.13_108918852_108975219_2	chr4	+	2624	21	NIC	ENSMUSG00000053510.13	novel	4179	29	NA	NA	2664	56245	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGCCCTCCCCCGCCCTC	NA	False	NA	NA	False	NA	NA	NA	108918851	108975219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ENSMUSG00000053553.12_139345494_139446269_1	chr5	-	303	3	NNC	ENSMUSG00000053553.12	novel	2030	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	337.5	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGACTTTTTGCCTGTC	NA	False	NA	-6	True	NA	NA	NA	139446269	139345493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_139345629_139441179_139441302_139446223
ENSMUSG00000053559.14_100519243_100533381_1	chr15	-	884	3	FSM	ENSMUSG00000053559.14	ENSMUST00000229307.2	527	3	0	-357	0	0	multi-exon	FALSE	canonical	3	21	junction_2	362	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTCATTTTCAAGAACT	NA	False	NA	-7	True	ATTAAA	-14	NA	100533381	100519242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_100519908_100520509_100520591_100533243
ENSMUSG00000053559.14_100519243_100534651_1	chr15	-	837	4	FSM	ENSMUSG00000053559.14	ENSMUST00000172334.9	920	4	170	-87	-79	0	multi-exon	FALSE	canonical	3	417	junction_3	158.779371736032	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTCATTTTCAAGAACT	NA	False	NA	-7	True	ATTAAA	-14	NA	100534651	100519242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534629
ENSMUSG00000053565.11_28670798_28681230_1	chr7	-	889	8	NIC	ENSMUSG00000053565.11	novel	774	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_6	1203.94528318274	17720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTCTCTTGCCTGT	NA	False	NA	-5	True	AATAAA	-16	NA	28681230	28670797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679743_28679968_28681098
ENSMUSG00000053600.9_33184788_33197744_1	chr17	+	1913	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	0	463	0	-463	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAACGAAGCCTGTGCTGT	NA	False	NA	NA	False	AGTAAA	-19	NA	33184787	33197744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
ENSMUSG00000053600.9_33184788_33197969_1	chr17	+	2138	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	0	238	0	-238	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGTAAGTTCTGAGTATT	NA	False	NA	4	True	AATAAA	-13	NA	33184787	33197969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
ENSMUSG00000053604.6_70742704_70768993_1	chr6	-	1606	9	FSM	ENSMUSG00000053604.6	ENSMUST00000066134.6	1829	9	223	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_1	0.992156741649222	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGTCTTCTCTGCCGA	8228	False	NA	-5	True	AATAAA	-20	NA	70768993	70742703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_70743633_70747977_70748078_70750413_70750556_70751234_70751304_70752092_70752158_70754335_70754396_70760544_70760601_70762528_70762590_70768869
ENSMUSG00000053604.6_70743257_70768993_1	chr6	-	1053	9	FSM	ENSMUSG00000053604.6	ENSMUST00000066134.6	1829	9	223	553	-6	0	multi-exon	FALSE	canonical	0	0	junction_1	0.992156741649222	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAACAAAAAAAACGTAT	8228	False	NA	NA	False	TATAAA	-37	NA	70768993	70743256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_70743633_70747977_70748078_70750413_70750556_70751234_70751304_70752092_70752158_70754335_70754396_70760544_70760601_70762528_70762590_70768869
ENSMUSG00000053644.14_56659816_56706023_1	chr18	-	2109	20	FSM	ENSMUSG00000053644.14	ENSMUST00000174518.8	4131	20	0	2022	0	0	multi-exon	FALSE	canonical	3	60	junction_19	109.003545140448	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGGTTTGGTGAGTTTTT	2854	False	NA	-5	True	ATTAAA	-30	NA	56706023	56659815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104_56695277_56695554_56695748_56705916
ENSMUSG00000053654.8_100153713_100162059_1	chr11	-	1411	9	NNC	ENSMUSG00000053654.8	novel	1542	8	NA	NA	-1362	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_8	27.8632262130572	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	100162059	100153712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235_100160370_100161862
ENSMUSG00000053654.8_100153713_100162545_1	chr11	-	1291	9	NNC	ENSMUSG00000053654.8	novel	1542	8	NA	NA	-1848	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	29.6858552175948	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	100162545	100153712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235_100160370_100162468
ENSMUSG00000053684.9_121575842_121586992_1	chr10	+	1345	3	FSM	ENSMUSG00000053684.9	ENSMUST00000065600.8	3123	3	0	1778	0	-1296	multi-exon	FALSE	canonical	3	147	junction_1	1	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAAGTCTGAAGCCTGGA	NA	False	NA	NA	False	NA	NA	NA	121575841	121586992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_121576116_121581235_121581522_121586207
ENSMUSG00000053684.9_121575842_121587292_1	chr10	+	1645	3	FSM	ENSMUSG00000053684.9	ENSMUST00000065600.8	3123	3	0	1478	0	-996	multi-exon	FALSE	canonical	3	147	junction_1	1	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTTCCAGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	121575841	121587292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_121576116_121581235_121581522_121586207
ENSMUSG00000053714.9_25079070_25095069_1	chr7	+	2760	10	NIC	ENSMUSG00000053714.9	novel	1887	7	NA	NA	2822	9908	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGATCAAGTTCCTCTCTT	1512	False	NA	NA	False	NA	NA	NA	25079069	25095069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_25079599_25079950_25080382_25082575_25082753_25082877_25083106_25083797_25084090_25084204_25084391_25084604_25084751_25084861_25084953_25087542_25088079_25094925
ENSMUSG00000053714.9_25230489_25236327_1	chr7	+	433	3	NNC	ENSMUSG00000053714.9	novel	1887	7	NA	NA	135650	-29515	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3.5	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTGTCTTGGTTCCATT	9045	False	NA	NA	False	NA	NA	NA	25230488	25236327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_25230583_25230715_25230888_25236160
ENSMUSG00000053768.14_32769577_33037180_1	chr6	-	1110	8	FSM	ENSMUSG00000053768.14	ENSMUST00000066379.11	1550	8	15	425	-8	0	multi-exon	FALSE	canonical	3	834	junction_3	29.0320020470023	2917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTTGTACTCTCTTTC	NA	False	NA	-10	True	AATAAA	-21	NA	33037180	32769576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ENSMUSG00000053799.9_37538907_37671703_1	chr19	+	2698	22	FSM	ENSMUSG00000053799.9	ENSMUST00000066439.8	3543	22	41	804	0	0	multi-exon	FALSE	canonical	3	69	junction_16	11.2298193902402	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGCTTGCATTTTTT	1910	False	NA	NA	False	AATAAA	-38	NA	37538906	37671703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_37539014_37558830_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
ENSMUSG00000053838.15_6055986_6150162_1	chr11	-	3379	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	253	295	253	0	multi-exon	FALSE	canonical	3	343	junction_5	15.4090882274066	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGTTCTGTCTGTGA	9711	False	NA	-6	True	AATAAA	-14	NA	6150162	6055985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ENSMUSG00000053838.15_6055986_6150162_2	chr11	-	1170	6	NNC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	253	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	144.562235732573	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGTTCTGTCTGTGA	9711	False	NA	-6	True	AATAAA	-14	NA	6150162	6055985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_6056147_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ENSMUSG00000053886.5_68729335_68800351_1	chr8	+	2607	9	FSM	ENSMUSG00000053886.5	ENSMUST00000066594.4	2718	9	116	-5	116	0	multi-exon	FALSE	canonical	3	24	junction_7	6.37867541108654	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	22	True	NA	NA	NA	68729334	68800351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_68729525_68734684_68735064_68746954_68747112_68749305_68749478_68781903_68782013_68783686_68783889_68787716_68787848_68798604_68798826_68799305
ENSMUSG00000053898.13_28524774_28531672_1	chr7	+	1135	10	FSM	ENSMUSG00000053898.13	ENSMUST00000066264.13	1267	10	132	0	0	0	multi-exon	TRUE	canonical	3	645	junction_5	36.3137901908447	3536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGTGTCTTTACTGCAG	NA	False	NA	14	True	AATAAA	-12	NA	28524773	28531672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530886_28531141_28531293_28531428
ENSMUSG00000053898.13_28524774_28531672_2	chr7	+	943	8	NNC	ENSMUSG00000053898.13	novel	1267	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	248.629631937851	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGTGTCTTTACTGCAG	NA	False	NA	14	True	AATAAA	-12	NA	28524773	28531672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28531190_28531293_28531428
ENSMUSG00000053907.11_72409783_72416539_1	chr6	-	2796	9	NNC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_8	271.304689187268	1924	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGTGTCTATTACTTG	NA	False	NA	-12	True	AATAAA	-16	NA	72416539	72409782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414427_72416328
ENSMUSG00000053907.11_72410883_72416539_1	chr6	-	1701	9	FSM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	2	1101	0	0	multi-exon	FALSE	canonical	3	591	junction_1	84.6271233116192	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGTAGACTCTGGCAAT	NA	False	NA	NA	False	AAAACA	-34	NA	72416539	72410882	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ENSMUSG00000053907.11_72411528_72416539_1	chr6	-	1641	8	FSM	ENSMUSG00000053907.11	ENSMUST00000205335.2	3387	8	0	1746	0	0	multi-exon	FALSE	canonical	3	761	junction_3	40.6724095420862	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATACTTTCGCCATGA	NA	False	NA	NA	False	AATAAA	-25	NA	72416539	72411527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ENSMUSG00000053929.18_76542340_76544331_1	chr15	-	1272	3	NNC	ENSMUSG00000053929.18	novel	1110	3	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.5	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTATGGAATTTGTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	76544331	76542339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_76543066_76543418_76543640_76544006
ENSMUSG00000053931.12_121220306_121251848_1	chr3	+	1881	7	FSM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	160	8	112	0	multi-exon	FALSE	canonical	3	4254	junction_2	486.023204750098	4310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGAACCACAGGCTGGT	NA	False	NA	19	True	AATAAA	-19	NA	121220305	121251848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
ENSMUSG00000053985.11_29738733_29750798_1	chr7	-	519	6	NIC	ENSMUSG00000053985.11	novel	2835	5	NA	NA	0	-1255	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	3.65513337649941	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCTGGTCTTAGTGATG	NA	False	NA	NA	False	ATTAAA	-15	NA	29750798	29738732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_29738842_29742954_29743082_29744144_29744234_29745163_29745265_29749864_29749929_29750769
ENSMUSG00000054021.7_43536372_43548679_1	chr13	+	820	4	NNC	ENSMUSG00000054021.7	novel	1548	9	NA	NA	3223	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.3649580285328	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATTTTTTTGTACTTT	4670	False	NA	10	True	ATTAAA	-22	NA	43536371	43548679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_43536485_43536584_43536709_43538973_43539090_43548212
ENSMUSG00000054046.8_43361991_43376178_1	chr7	+	938	5	NIC	ENSMUSG00000054046.8	novel	1809	6	NA	NA	0	-780	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	27.4988636128841	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCCCTACTGTGCCTC	NA	False	NA	8	True	AATAAA	-21	NA	43361990	43376178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_43362129_43370390_43370581_43370691_43370961_43373178_43373316_43375974
ENSMUSG00000054046.8_43362567_43376178_1	chr7	+	1023	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-256	-780	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	19.3245957266899	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCCCTACTGTGCCTC	NA	False	NA	8	True	AATAAA	-21	NA	43362566	43376178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_43362686_43363202_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
ENSMUSG00000054057.3_18032503_18033222_1	chr2	-	617	2	NNC	ENSMUSG00000054057.3	novel	3217	2	NA	NA	349	234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGGCTCGGGTTCCTTAC	NA	False	NA	NA	False	NA	NA	NA	18033222	18032502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_18032675_18032777
ENSMUSG00000054079.13_93750779_93776592_1	chr11	-	1903	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	0	710	0	-710	multi-exon	TRUE	canonical	3	770	junction_1	49.2161035848126	707	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAGTGTACATGATTTT	NA	False	NA	-13	True	AATAAA	-14	NA	93776592	93750778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ENSMUSG00000054083.9_28592673_28661706_1	chr7	+	3474	22	NNC	ENSMUSG00000054083.9	novel	3040	21	NA	NA	2296	68718	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	575	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCGCCCAAGACTGACGC	NA	False	NA	NA	False	NA	NA	NA	28592672	28661706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_28593209_28593552_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ENSMUSG00000054091.10_122718046_122719283_1	chr3	+	416	2	FSM	ENSMUSG00000054091.10	ENSMUST00000106429.6	1160	2	194	550	194	-550	multi-exon	FALSE	canonical	3	1657	junction_1	0	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTTTCATGGTTGAAG	NA	False	NA	5	True	ACTAAA	-21	NA	122718045	122719283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_122718306_122719127
ENSMUSG00000054091.10_122718046_122719385_1	chr3	+	518	2	FSM	ENSMUSG00000054091.10	ENSMUST00000106429.6	1160	2	194	448	194	-448	multi-exon	FALSE	canonical	3	1657	junction_1	0	3125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTTATCTTT	NA	False	NA	107	True	AATAAA	-8	NA	122718045	122719385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_122718306_122719127
ENSMUSG00000054136.7_89207183_89208934_1	chr15	+	1033	3	NNC	ENSMUSG00000054136.7	novel	1298	3	NA	NA	260	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.5	769	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCCACTCTCTTGTG	NA	False	NA	NA	False	ATTAAA	-19	NA	89207182	89208934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_89207337_89207484_89207604_89208174
ENSMUSG00000054169.8_24471099_24484082_1	chr7	+	1218	6	NNC	ENSMUSG00000054169.8	novel	1048	4	NA	NA	-5532	0	at_least_one_novel_splicesite	TRUE	canonical	2	9	junction_1	8.73155198117723	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCTCCTTCGACTCTAT	794	False	NA	NA	False	AATAAA	-26	NA	24471098	24484082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_24471221_24473674_24473740_24474864_24474981_24477550_24477911_24480294_24480655_24483887
ENSMUSG00000054199.18_88742538_88802245_1	chr3	+	2994	22	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	0	-296	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	87.7809063996532	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTGGGAGATGAACCTC	NA	False	NA	NA	False	NA	NA	NA	88742537	88802245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88783213_88783238_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126
ENSMUSG00000054199.18_88816951_88821238_1	chr3	+	1778	14	NIC	ENSMUSG00000054199.19	novel	7537	32	NA	NA	19209	3828	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1592	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTCCCGCGCGAGCACG	NA	False	NA	NA	False	NA	NA	NA	88816950	88821238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ENSMUSG00000054263.13_7159048_7208493_1	chr15	+	2152	13	ISM	ENSMUSG00000054263.13	ENSMUST00000067190.12	4143	20	8	12731	0	-6331	5prime_fragment	FALSE	canonical	3	20	junction_6	5.99768473848219	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGCTTGGGTGGCATG	NA	False	NA	NA	False	NA	NA	NA	7159047	7208493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279
ENSMUSG00000054280.15_32985356_33011582_1	chr5	-	4334	5	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	0	7606	combination_of_known_splicesites	FALSE	canonical	3	86	junction_4	14.456832294801	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGCACACAGACTTCTC	7071	False	NA	NA	False	NA	NA	NA	33011582	32985355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
ENSMUSG00000054302.16_54718650_54903150_1	chr12	-	192	2	NNC	ENSMUSG00000054302.16	novel	4186	6	NA	NA	-160468	-210	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	11563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTACTTCTTTTAGGA	NA	False	NA	NA	False	NA	NA	NA	54903150	54718649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_54718790_54903098
ENSMUSG00000054302.16_54720251_54742647_1	chr12	-	1033	6	NNC	ENSMUSG00000054302.16	novel	4186	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	163.435614233863	1187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGAGTGGTTATCAAC	NA	False	NA	-5	True	ATTAAA	-19	NA	54742647	54720250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_54720636_54725294_54725409_54732644_54732749_54738784_54738881_54739559_54739742_54742495
ENSMUSG00000054302.16_54720251_54742647_2	chr12	-	1041	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	19	3126	0	0	multi-exon	FALSE	canonical	3	353	junction_3	29.9973332148043	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGAGTGGTTATCAAC	NA	False	NA	-5	True	ATTAAA	-19	NA	54742647	54720250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ENSMUSG00000054309.10_21320705_21336194_1	chr12	+	932	7	NIC	ENSMUSG00000054309.10	novel	336	3	NA	NA	-14687	-347	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCCAGCTCCGGCTTTG	4283	False	NA	NA	False	NA	NA	NA	21320704	21336194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21336106
ENSMUSG00000054309.10_21336400_21364836_1	chr12	+	2237	18	FSM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	41	221	0	0	multi-exon	FALSE	canonical	3	692	junction_10	70.3324286444819	2475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGCCTGTTTACTTT	NA	False	NA	13	True	AATAAA	-17	NA	21336399	21364836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ENSMUSG00000054362.10_106448106_106472990_1	chr4	-	2058	8	ISM	ENSMUSG00000054362.10	ENSMUST00000106788.2	1569	10	1445	-401	1445	0	3prime_fragment	FALSE	canonical	1	5	junction_3	4.52656557650139	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGGTTCTACCAGTTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	106472990	106448105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_106448885_106464485_106464620_106467596_106467723_106468609_106468772_106470305_106470450_106470564_106470700_106472231_106472355_106472535
ENSMUSG00000054379.8_103105425_103126862_1	chr3	-	733	4	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20571	117	intron_retention	TRUE	canonical	0	0	junction_1	3.29983164553722	937	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTTGCAATTTTATT	NA	False	NA	-23	True	NA	NA	NA	103126862	103105424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_103105630_103105704_103105942_103106094_103106316_103126792
ENSMUSG00000054379.8_103105542_103106291_2	chr3	-	669	2	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_1	0	850	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTTCCGTCCCAGGTTT	NA	False	NA	-3	True	NA	NA	NA	103106291	103105541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_103106032_103106112
ENSMUSG00000054379.8_103105542_103126862_3	chr3	-	616	4	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20571	0	intron_retention	FALSE	canonical	0	0	junction_1	3.29983164553722	503	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTTCCGTCCCAGGTTT	NA	False	NA	-3	True	NA	NA	NA	103126862	103105541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_103105630_103105704_103105942_103106094_103106316_103126792
ENSMUSG00000054387.14_132935697_132953076_1	chr1	-	1645	5	ISM	ENSMUSG00000054387.14	ENSMUST00000067398.13	1914	11	18	16605	0	1138	5prime_fragment	FALSE	canonical	3	161	junction_3	92.5834083408037	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTACAGATGGTTGTGAG	NA	False	NA	NA	False	NA	NA	NA	132953076	132935696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ENSMUSG00000054405.15_132262887_132281053_1	chr4	+	657	8	NNC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	1116.13988590049	1014	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	2357	False	NA	19	True	AATAAA	-19	NA	132262886	132281053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277767_132280956
ENSMUSG00000054408.10_54973468_54983033_1	chr8	-	3464	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	423.496753234308	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGTTTATGTGTTTTT	NA	False	NA	-4	True	AATAAA	-38	NA	54983033	54973467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_54976431_54977975_54978092_54979485_54979557_54981372_54981451_54982797
ENSMUSG00000054408.10_54975083_54983033_1	chr8	-	1849	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	0	-1615	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	423.496753234308	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAATTGTATTTGACAT	NA	False	NA	NA	False	ATTAAA	-20	NA	54983033	54975082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_54976431_54977975_54978092_54979485_54979557_54981372_54981451_54982797
ENSMUSG00000054414.5_115739661_115801055_1	chr3	-	1981	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	0	7039	0	-7039	multi-exon	FALSE	canonical	3	92	junction_7	12.5940462123973	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAATTGTCTTTGTGTATT	108	False	NA	-5	True	NA	NA	NA	115801055	115739660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ENSMUSG00000054418.7_117502073_117503623_1	chr11	+	724	2	FSM	ENSMUSG00000054418.7	ENSMUST00000155384.2	1784	2	0	1060	0	-1060	multi-exon	FALSE	canonical	3	27	junction_1	0	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGGTCTCAGAGCTTTC	NA	False	NA	NA	False	NA	NA	NA	117502072	117503623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_117502261_117503087
ENSMUSG00000054426.12_115675230_115681746_1	chr3	-	747	3	NNC	ENSMUSG00000054426.12	novel	739	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	22.5	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTGGCTATGGTG	941	False	NA	-5	True	NA	NA	NA	115681746	115675229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_115675488_115679862_115680030_115681424
ENSMUSG00000054426.12_115675230_115681746_3	chr3	-	785	3	NNC	ENSMUSG00000054426.12	novel	739	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	24.5	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTGGCTATGGTG	941	False	NA	-5	True	NA	NA	NA	115681746	115675229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_115675488_115679862_115680068_115681424
ENSMUSG00000054428.13_132257866_132260906_1	chr4	-	492	3	NNC	ENSMUSG00000054428.13	novel	539	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	3926	21443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGCCTTCTACTGTCT	9305	False	NA	-20	True	AATAAA	-19	NA	132260906	132257865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_132258152_132260606_132260699_132260792
ENSMUSG00000054428.13_132257866_132260906_2	chr4	-	463	3	NNC	ENSMUSG00000054428.13	novel	539	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4218.5	18659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGCCTTCTACTGTCT	9305	False	NA	-20	True	AATAAA	-19	NA	132260906	132257865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_132258135_132260606_132260699_132260804
ENSMUSG00000054428.13_132257866_132260970_1	chr4	-	447	2	NIC	ENSMUSG00000054428.13	novel	539	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	0	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGCCTTCTACTGTCT	9241	False	NA	-20	True	AATAAA	-19	NA	132260970	132257865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_132258135_132260792
ENSMUSG00000054428.13_132258021_132260970_1	chr4	-	384	3	FSM	ENSMUSG00000054428.13	ENSMUST00000067496.7	539	3	0	155	0	-155	multi-exon	FALSE	canonical	3	7869	junction_2	284	2444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATCCAACAACTAAAGAATA	9241	False	NA	NA	False	NA	NA	NA	132260970	132258020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132258135_132260606_132260699_132260792
ENSMUSG00000054452.11_81395474_81401998_1	chr10	+	1067	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	146	198	146	107	multi-exon	FALSE	canonical	3	2772	junction_6	274.064925397858	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	203	False	NA	18	True	AATAAA	-18	NA	81395473	81401998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ENSMUSG00000054469.15_73414989_73548060_1	chr17	+	2164	6	FSM	ENSMUSG00000054469.15	ENSMUST00000067545.8	4467	6	0	2303	0	694	multi-exon	FALSE	canonical	3	22	junction_1	24.2866218317822	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACTTTACTCTTAAAAC	NA	False	NA	NA	False	NA	NA	NA	73414988	73548060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_73415173_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
ENSMUSG00000054469.15_73414989_73550363_1	chr17	+	4446	6	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	15.992498241363	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGATTCTGTTTTT	NA	False	NA	16	True	AATAAA	-26	NA	73414988	73550363	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_73415152_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
ENSMUSG00000054474.16_71105382_71121331_1	chr6	-	1753	9	FSM	ENSMUSG00000054474.16	ENSMUST00000160918.8	2077	9	92	232	0	0	multi-exon	TRUE	canonical	1	2	junction_8	2.47171499166065	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGGTGTTTTGTTTTGTT	NA	False	NA	0	True	NA	NA	NA	71121331	71105381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_71105837_71106195_71106348_71108631_71108758_71108858_71109008_71111064_71111296_71115634_71115788_71116732_71116928_71118203_71118439_71121274
ENSMUSG00000054509.8_56813076_56823472_1	chr14	+	574	4	NNC	ENSMUSG00000054509.8	novel	6387	35	NA	NA	0	-73777	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	10.0332779621949	27	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTGCTTATGTGTGT	1087	False	NA	NA	False	NA	NA	NA	56813075	56823472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_56813188_56821615_56821749_56823013_56823210_56823339
ENSMUSG00000054519.9_59352622_59363300_1	chr11	-	2813	4	FSM	ENSMUSG00000054519.9	ENSMUST00000057799.8	3412	4	0	599	0	-599	multi-exon	FALSE	canonical	2	7	junction_3	2.86744175568088	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGTCTGTAGCTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	59363300	59352621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_59355113_59355837_59355899_59356276_59356404_59363166
ENSMUSG00000054604.8_64672359_64676503_1	chr16	+	1058	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	0	3367	0	154	multi-exon	FALSE	canonical	3	981	junction_2	152	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGTTCATTTTTATA	NA	False	NA	21	True	ATTAAA	-14	NA	64672358	64676503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_64672600_64673161_64673389_64675913
ENSMUSG00000054604.8_64672359_64677812_1	chr16	+	2367	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	0	2058	0	1463	multi-exon	FALSE	canonical	3	981	junction_2	152	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGGGTTTTGTGCT	NA	False	NA	NA	False	ATTAAA	-23	NA	64672358	64677812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_64672600_64673161_64673389_64675913
ENSMUSG00000054604.8_64672359_64679744_1	chr16	+	4299	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	0	126	0	-126	multi-exon	FALSE	canonical	3	981	junction_2	152	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCGTACTCCTGTGCTTC	NA	False	NA	34	True	ATTAAA	-16	NA	64672358	64679744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_64672600_64673161_64673389_64675913
ENSMUSG00000054612.5_136496343_136729914_1	chr7	+	802	5	NNC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	0	-2081	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	92.3728856320944	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGTGATGTGGCTGCCCT	NA	False	NA	30	True	ATTAAA	-21	NA	136496342	136729914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_136496417_136552996_136553134_136687688_136687839_136723217_136723358_136729613
ENSMUSG00000054612.5_136496343_136729914_2	chr7	+	1074	6	NNC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	0	-2081	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	105.623860940604	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGTGATGTGGCTGCCCT	NA	False	NA	30	True	ATTAAA	-21	NA	136496342	136729914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_136496417_136548180_136548442_136552996_136553134_136687677_136687839_136723217_136723358_136729613
ENSMUSG00000054612.5_136496343_136729914_3	chr7	+	970	6	NNC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	0	-2081	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	98.1150345258055	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGTGATGTGGCTGCCCT	NA	False	NA	30	True	ATTAAA	-21	NA	136496342	136729914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_136496417_136521584_136521742_136552996_136553134_136687677_136687839_136723217_136723358_136729613
ENSMUSG00000054612.5_136496343_136729914_4	chr7	+	813	5	FSM	ENSMUSG00000054612.5	ENSMUST00000081510.4	2894	5	0	2081	0	-2081	multi-exon	FALSE	canonical	3	172	junction_1	21.7887585695009	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGTGATGTGGCTGCCCT	NA	False	NA	30	True	ATTAAA	-21	NA	136496342	136729914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_136496417_136552996_136553134_136687677_136687839_136723217_136723358_136729613
ENSMUSG00000054612.5_136496343_136729914_5	chr7	+	676	4	NIC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	0	-2081	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	106.094297678999	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGTGATGTGGCTGCCCT	NA	False	NA	30	True	ATTAAA	-21	NA	136496342	136729914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_136496417_136687677_136687839_136723217_136723358_136729613
ENSMUSG00000054612.5_136496343_136729914_6	chr7	+	652	4	NIC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	0	-2081	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	91.8634251968045	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGTGATGTGGCTGCCCT	NA	False	NA	30	True	ATTAAA	-21	NA	136496342	136729914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_136496417_136552996_136553134_136723217_136723358_136729613
ENSMUSG00000054612.5_136496343_136729914_7	chr7	+	935	5	NNC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	0	-2081	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.519998222538	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGTGATGTGGCTGCCCT	NA	False	NA	30	True	ATTAAA	-21	NA	136496342	136729914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_136496417_136566167_136566427_136687677_136687839_136723217_136723358_136729613
ENSMUSG00000054626.12_52785715_52799673_1	chrX	-	1024	8	NNC	ENSMUSG00000054626.12	novel	1032	8	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	47	junction_7	85.2532840949813	1605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAGTGGCAAATAGTCC	NA	False	NA	NA	False	AATAAA	-13	NA	52799673	52785714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798218_52799598
ENSMUSG00000054626.12_52785715_52799673_2	chrX	-	1050	8	NIC	ENSMUSG00000054626.12	novel	1032	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	100.637559426622	1476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAGTGGCAAATAGTCC	NA	False	NA	NA	False	AATAAA	-13	NA	52799673	52785714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798236_52799590
ENSMUSG00000054626.12_52785920_52799673_1	chrX	-	819	8	NNC	ENSMUSG00000054626.12	novel	1032	8	NA	NA	0	-205	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_7	85.2532840949813	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTTGAAAGGCTCTTT	NA	False	NA	NA	False	AATAAA	-32	NA	52799673	52785919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798218_52799598
ENSMUSG00000054626.12_52785920_52799673_2	chrX	-	789	8	FSM	ENSMUSG00000054626.12	ENSMUST00000114810.2	984	8	-10	205	0	-205	multi-exon	FALSE	canonical	3	140	junction_7	54.1238187409392	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTTGAAAGGCTCTTT	NA	False	NA	NA	False	AATAAA	-32	NA	52799673	52785919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798188_52799598
ENSMUSG00000054648.9_70158281_70169552_1	chr8	-	2686	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238418.2	3180	5	0	494	0	0	multi-exon	FALSE	canonical	3	68	junction_4	9.33742469849155	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCACTTGGGTAGAATC	NA	False	NA	NA	False	NA	NA	NA	70169552	70158280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169417
ENSMUSG00000054676.18_37883273_37896016_1	chr7	+	2111	3	FSM	ENSMUSG00000054676.18	ENSMUST00000178876.10	3282	3	195	976	0	0	multi-exon	FALSE	canonical	3	43	junction_1	1.5	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTCATATCTTTCTGT	NA	False	NA	9	True	TTTAAA	-5	NA	37883272	37896016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_37883325_37888030_37888202_37894128
ENSMUSG00000054708.18_81479637_81483444_1	chr10	+	965	5	FSM	ENSMUSG00000054708.18	ENSMUST00000132458.2	829	5	0	-136	0	0	multi-exon	FALSE	canonical	3	22	junction_1	34.9070193514141	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCGCAAGAGTTGTGT	NA	False	NA	NA	False	AATAAA	-29	NA	81479636	81483444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_81479728_81480809_81480978_81482138_81482268_81482626_81482693_81482933
ENSMUSG00000054717.8_57964941_57967083_1	chr8	+	678	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	0	1950	0	840	multi-exon	FALSE	canonical	3	4513	junction_1	1044.37167114969	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCAGAAGATGAGGAGGA	NA	False	NA	-4	True	NA	NA	NA	57964940	57967083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ENSMUSG00000054717.8_57964941_57967523_1	chr8	+	1118	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	0	1510	0	1280	multi-exon	FALSE	canonical	3	4513	junction_1	1044.37167114969	36880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTGTGTTTGTATTA	NA	False	NA	4	True	AATAAA	-15	NA	57964940	57967523	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ENSMUSG00000054723.7_57024798_57029137_1	chr17	-	502	4	NNC	ENSMUSG00000054723.7	novel	345	2	NA	NA	-4115	-2096	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	7478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAAGGGTAGCCGGCTA	2408	False	NA	NA	False	NA	NA	NA	57029137	57024797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_57024943_57028034_57028128_57028330_57028442_57028984
ENSMUSG00000054723.7_57024798_57029137_2	chr17	-	467	4	NNC	ENSMUSG00000054723.7	novel	345	2	NA	NA	-4115	-2096	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAAGGGTAGCCGGCTA	2408	False	NA	NA	False	NA	NA	NA	57029137	57024797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_57024943_57028034_57028128_57028365_57028442_57028984
ENSMUSG00000054723.7_57024798_57029137_4	chr17	-	496	4	NNC	ENSMUSG00000054723.7	novel	345	2	NA	NA	-4115	-2096	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAAGGGTAGCCGGCTA	2408	False	NA	NA	False	NA	NA	NA	57029137	57024797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_57024943_57028034_57028128_57028318_57028442_57029002
ENSMUSG00000054723.7_57024798_57029137_5	chr17	-	514	4	NIC	ENSMUSG00000054723.7	novel	345	2	NA	NA	-4115	-2096	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	14966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAAGGGTAGCCGGCTA	2408	False	NA	NA	False	NA	NA	NA	57029137	57024797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_57024943_57028034_57028128_57028318_57028442_57028984
ENSMUSG00000054723.7_57024798_57029137_6	chr17	-	507	4	NNC	ENSMUSG00000054723.7	novel	345	2	NA	NA	-4115	-2096	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAAGGGTAGCCGGCTA	2408	False	NA	NA	False	NA	NA	NA	57029137	57024797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_57024943_57028034_57028128_57028318_57028442_57028991
ENSMUSG00000054727.3_52744868_52759810_2	chrX	-	1233	9	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	459.078901170594	3575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGACTTTAGTATATTT	NA	False	NA	-11	True	AGTAAA	-17	NA	52759810	52744867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749002_52749785_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
ENSMUSG00000054727.3_52744868_52759810_3	chrX	-	3309	8	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	1225	junction_3	142.325008917145	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGACTTTAGTATATTT	NA	False	NA	-11	True	AGTAAA	-17	NA	52759810	52744867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52752016_52752989_52753054_52753476_52753824_52759728
ENSMUSG00000054727.3_52744868_52759810_4	chrX	-	889	8	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	152	junction_7	416.319245634542	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGACTTTAGTATATTT	NA	False	NA	-11	True	AGTAAA	-17	NA	52759810	52744867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52759728
ENSMUSG00000054727.3_52744868_52759810_5	chrX	-	1214	9	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_5	453.281076568391	3593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGACTTTAGTATATTT	NA	False	NA	-11	True	AGTAAA	-17	NA	52759810	52744867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749886_52751980_52752016_52752989_52753054_52753476_52753824_52759728
ENSMUSG00000054733.10_64360075_64678366_1	chr14	-	1337	6	ISM	ENSMUSG00000054733.10	ENSMUST00000067927.9	1860	11	14986	1	0	0	3prime_fragment	FALSE	canonical	3	54	junction_3	9.47839648885823	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACCGCCTGCTGTGAGT	NA	False	NA	-5	True	AATAAA	-19	NA	64678366	64360074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64678158
ENSMUSG00000054733.10_64360628_64678366_1	chr14	-	784	6	ISM	ENSMUSG00000054733.10	ENSMUST00000067927.9	1860	11	14986	554	0	-268	3prime_fragment	FALSE	canonical	3	54	junction_3	9.47839648885823	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCTGTCCCTGAAGGTT	NA	False	NA	-2	True	ATTAAA	-17	NA	64678366	64360627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64678158
ENSMUSG00000054737.12_20897617_20928282_1	chrX	-	716	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115334.8	3160	5	9	2435	0	211	multi-exon	FALSE	canonical	3	41	junction_2	3.67423461417477	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTTCCATACAGAATA	3245	False	NA	NA	False	AATAAA	-22	NA	20928282	20897616	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926797_20928176
ENSMUSG00000054753.10_3204498_3218931_1	chr7	-	3351	12	FSM	ENSMUSG00000054753.10	ENSMUST00000171749.3	3449	12	98	0	0	0	multi-exon	FALSE	canonical	3	117	junction_11	40.7771610034849	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9604	False	NA	87	True	NA	NA	NA	3218931	3204497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218840
ENSMUSG00000054753.10_3204637_3218931_1	chr7	-	3212	12	FSM	ENSMUSG00000054753.10	ENSMUST00000171749.3	3449	12	98	139	0	-139	multi-exon	FALSE	canonical	3	117	junction_11	40.7771610034849	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATGTTTTGTGATGAA	9604	False	NA	-52	True	NA	NA	NA	3218931	3204636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218840
ENSMUSG00000054766.14_29952111_29961150_1	chr2	+	1139	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	246	1439	246	20	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	13137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGTTTCTGTTCTTAAT	NA	False	NA	8	True	AATACA	-13	NA	29952110	29961150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ENSMUSG00000054766.14_29952111_29961597_1	chr2	+	1586	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	246	992	246	156	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	19051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGAGCCCTGACACTC	NA	False	NA	20	True	AATAAA	-16	NA	29952110	29961597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ENSMUSG00000054766.14_29952111_29961807_1	chr2	+	1796	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	246	782	246	366	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	24082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTGATGCTTTTCTGTC	NA	False	NA	16	True	AATAAA	-18	NA	29952110	29961807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ENSMUSG00000054766.14_29952111_29962589_1	chr2	+	2578	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	246	0	246	0	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	33136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	NA	False	NA	19	True	AATAAA	-24	NA	29952110	29962589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ENSMUSG00000054770.17_58035130_58064184_1	chr1	-	4065	9	Genic_Genomic	ENSMUSG00000054770.17	novel	5016	10	NA	NA	-6069	-32369	multi-exon	FALSE	non_canonical	0	0	junction_1	0	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGCAAAGATGCGCTGCCA	NA	False	NA	NA	False	NA	NA	NA	58064184	58035129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_-_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ENSMUSG00000054808.16_28592673_28661706_1	chr7	-	3474	22	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	324.644651364941	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCATCTTCTCCC	NA	False	NA	-1	True	AATAAA	-24	NA	28661706	28592672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_28593209_28593552_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ENSMUSG00000054808.16_28592673_28661706_2	chr7	-	3818	21	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	395	junction_14	307.041247229098	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCATCTTCTCCC	NA	False	NA	-1	True	AATAAA	-24	NA	28661706	28592672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ENSMUSG00000054814.15_74160699_74226409_1	chr5	-	3165	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	0	-1312	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGCAGCTAATTTATTA	NA	False	NA	-1	True	ATTAAA	-17	NA	74226409	74160698	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
ENSMUSG00000054814.15_74160699_74229081_1	chr5	-	3234	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	11	1312	0	-1312	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGCAGCTAATTTATTA	NA	False	NA	-1	True	ATTAAA	-17	NA	74229081	74160698	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
ENSMUSG00000054814.15_74161369_74226409_1	chr5	-	2495	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	0	1091	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTCTTGGTTTTCCTACA	NA	False	NA	-19	True	ATTAAA	-29	NA	74226409	74161368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
ENSMUSG00000054814.15_74161369_74229081_1	chr5	-	2564	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	11	1982	0	1091	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTCTTGGTTTTCCTACA	NA	False	NA	-19	True	ATTAAA	-29	NA	74229081	74161368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
ENSMUSG00000054836.13_110134272_110145189_1	chr9	+	786	5	ISM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	31	5202	0	247	5prime_fragment	FALSE	canonical	3	134	junction_1	15.6923548264752	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGACTGGCACCGTGGGA	2213	False	NA	NA	False	AATAAA	-16	NA	110134271	110145189	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818
ENSMUSG00000054836.13_110134272_110150393_1	chr9	+	1353	8	NNC	ENSMUSG00000054836.13	novel	2219	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	63.5539301760035	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGAGGTTGTCTTTTT	2213	False	NA	9	True	AATAAA	-19	NA	110134271	110150393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_110134418_110137258_110137337_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ENSMUSG00000054855.14_98567656_98575339_1	chr15	-	1630	5	FSM	ENSMUSG00000054855.14	ENSMUST00000003451.11	2203	5	3	570	0	-570	multi-exon	FALSE	canonical	3	35	junction_3	4.54835134966506	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGGGTTTTGTTGTTG	NA	False	NA	NA	False	AATATA	-14	NA	98575339	98567655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98568724_98570391_98570527_98571726_98571837_98574367_98574456_98575110
ENSMUSG00000054893.16_6289592_6310681_1	chr7	+	3457	5	FSM	ENSMUSG00000054893.16	ENSMUST00000086327.12	3672	5	14	201	0	0	multi-exon	FALSE	canonical	3	26	junction_1	11.1214882097676	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTCTTTTACATGTTCT	2986	False	NA	NA	False	AATAAA	-37	NA	6289591	6310681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_6289654_6292356_6292437_6293534_6293662_6296847_6296941_6307586
ENSMUSG00000054894.7_69771742_69790612_1	chr12	+	659	5	FSM	ENSMUSG00000054894.7	ENSMUST00000021372.6	1485	5	6	820	0	-820	multi-exon	FALSE	canonical	3	102	junction_1	45.2513811943901	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGGTGTCACTATTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	69771741	69790612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_69771789_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ENSMUSG00000054894.7_69771742_69790612_3	chr12	+	759	6	FSM	ENSMUSG00000054894.7	ENSMUST00000220916.2	1599	6	18	822	0	-820	multi-exon	FALSE	canonical	3	32	junction_1	68.5787138987018	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGGTGTCACTATTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	69771741	69790612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_69771789_69772228_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ENSMUSG00000054894.7_69771742_69790612_4	chr12	+	548	4	NIC	ENSMUSG00000054894.7	novel	1485	5	NA	NA	0	-820	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	90.3487071788462	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGGTGTCACTATTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	69771741	69790612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_69771789_69787672_69787882_69788418_69788591_69790492
ENSMUSG00000054894.7_69771742_69791434_2	chr12	+	1370	4	NIC	ENSMUSG00000054894.7	novel	1599	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	90.3487071788462	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGCTAGTCTTTACTT	NA	False	NA	4	True	AATAAA	-16	NA	69771741	69791434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_69771789_69787672_69787882_69788418_69788591_69790492
ENSMUSG00000054942.14_152025624_152046010_1	chr3	-	1640	6	ISM	ENSMUSG00000054942.14	ENSMUST00000199334.5	4024	14	10	38410	0	11408	5prime_fragment	FALSE	canonical	3	188	junction_4	9.69535971483266	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTAGTATCTTTTAAAAT	NA	False	NA	-39	True	NA	NA	NA	152046010	152025623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ENSMUSG00000055041.9_76784136_76785505_1	chr15	+	1034	2	FSM	ENSMUSG00000055041.9	ENSMUST00000109793.3	920	2	0	-114	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTATTCTATTAGGGAA	NA	False	NA	NA	False	ATTAAA	-23	NA	76784135	76785505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76784216_76784551
ENSMUSG00000055044.13_40210683_40260060_1	chr19	-	1505	7	FSM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	0	1066	0	124	multi-exon	FALSE	canonical	3	193	junction_3	18.3938395484285	1754	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGACCTCTTAGTTGAC	NA	False	NA	-18	True	AATAAA	-18	NA	40260060	40210682	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_40211216_40211494_40211613_40218950_40219103_40231849_40232044_40238062_40238148_40240353_40240506_40259789
ENSMUSG00000055067.16_178784815_178921967_2	chr1	-	967	7	ISM	ENSMUSG00000055067.16	ENSMUST00000068437.13	3360	9	154438	2204	-105057	0	3prime_fragment	FALSE	canonical	3	343	junction_1	12.7758452644912	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGACTTGGCTTTGCCT	NA	False	NA	-5	True	AATAAA	-26	NA	178921967	178784814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_178785128_178799752_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430_178920534_178921899
ENSMUSG00000055067.16_179153262_179345578_1	chr1	-	1024	6	NNC	ENSMUSG00000055067.16	novel	6871	12	NA	NA	-8	51838	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	157.634260235521	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTTATAAAGTATTGGCAT	NA	False	NA	NA	False	AATAAA	-9	NA	179345578	179153261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_179153693_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
ENSMUSG00000055067.16_179232846_179345578_1	chr1	-	588	5	NNC	ENSMUSG00000055067.16	novel	1229	6	NA	NA	-8	-10057	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	188.12628737101	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGAAGCTTCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	179345578	179232845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_179232985_179237971_179238030_179239242_179239344_179250919_179250984_179345352
ENSMUSG00000055093.11_122433863_122434380_1	chr6	+	468	2	Genic_Genomic	ENSMUSG00000055093.11	novel	471	1	NA	NA	0	47	multi-exon	FALSE	canonical	3	216	junction_1	0	5138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGCTTCACAATGCAG	NA	False	NA	3	True	AATAAA	-29	NA	122433862	122434380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_122434002_122434051
ENSMUSG00000055102.16_43256593_43267640_1	chr7	+	2392	5	NIC	ENSMUSG00000055102.16	novel	2362	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	25.6843824142221	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCTTATTTTAAATACAC	2836	False	NA	7	True	AATAAA	-15	NA	43256592	43267640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_43256742_43259209_43259403_43261406_43261534_43261970_43262064_43265810
ENSMUSG00000055102.16_43256649_43267709_1	chr7	+	2405	5	NIC	ENSMUSG00000055102.16	novel	2362	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	25.6843824142221	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCACATTCATCCATTGC	2892	False	NA	7	True	AATAAA	-21	NA	43256648	43267709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_43256742_43259209_43259403_43261406_43261534_43261970_43262064_43265810
ENSMUSG00000055148.8_73072877_73075195_1	chr8	+	790	3	NNC	ENSMUSG00000055148.8	novel	1847	3	NA	NA	0	-305	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1477.5	955	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGTAGTGGTGTGGCTG	NA	False	NA	34	True	ATTAAA	-21	NA	73072876	73075195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_73072948_73073975_73074087_73074587
ENSMUSG00000055148.8_73072877_73075195_2	chr8	+	725	2	NIC	ENSMUSG00000055148.8	novel	1847	3	NA	NA	0	-305	combination_of_known_splicesites	FALSE	canonical	3	215	junction_1	0	678	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGTAGTGGTGTGGCTG	NA	False	NA	34	True	ATTAAA	-21	NA	73072876	73075195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_73072994_73074587
ENSMUSG00000055148.8_73073902_73075195_1	chr8	+	745	3	NNC	ENSMUSG00000055148.8	novel	1847	3	NA	NA	1025	-305	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1477.5	937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGTAGTGGTGTGGCTG	NA	False	NA	34	True	ATTAAA	-21	NA	73073901	73075195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_73073935_73073982_73074087_73074587
ENSMUSG00000055148.8_73073902_73075195_2	chr8	+	732	3	NNC	ENSMUSG00000055148.8	novel	1847	3	NA	NA	1025	-305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1477.5	873	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGTAGTGGTGTGGCTG	NA	False	NA	34	True	ATTAAA	-21	NA	73073901	73075195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_73073935_73073995_73074087_73074587
ENSMUSG00000055184.5_131455641_131466773_1	chr1	+	1354	4	FSM	ENSMUSG00000055184.5	ENSMUST00000068613.5	2191	4	0	837	0	-837	multi-exon	FALSE	canonical	3	32	junction_2	3.29983164553722	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAACGTTTACTGTTTTA	NA	False	NA	13	True	AGTAAA	-26	NA	131455640	131466773	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_131456591_131458391_131458470_131461546_131461672_131466572
ENSMUSG00000055184.5_131456105_131466773_1	chr1	+	890	4	FSM	ENSMUSG00000055184.5	ENSMUST00000068613.5	2191	4	464	837	464	-837	multi-exon	FALSE	canonical	3	32	junction_2	3.29983164553722	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAACGTTTACTGTTTTA	NA	False	NA	13	True	AGTAAA	-26	NA	131456104	131466773	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_131456591_131458391_131458470_131461546_131461672_131466572
ENSMUSG00000055188.13_8008598_8011935_2	chrX	+	1149	7	NNC	ENSMUSG00000055188.13	novel	839	3	NA	NA	-3070	-1980	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGACTGCGGCGCGGGAA	NA	False	NA	NA	False	NA	NA	NA	8008597	8011935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_8009195_8009489_8009569_8009896_8009982_8010082_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUSG00000055188.13_8008598_8011935_3	chrX	+	1149	7	NNC	ENSMUSG00000055188.13	novel	839	3	NA	NA	-3070	-1980	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGACTGCGGCGCGGGAA	NA	False	NA	NA	False	NA	NA	NA	8008597	8011935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_8009195_8009489_8009569_8009896_8009977_8010077_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUSG00000055188.13_8008598_8011935_6	chrX	+	1150	7	NNC	ENSMUSG00000055188.13	novel	839	3	NA	NA	-3070	-1980	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGACTGCGGCGCGGGAA	NA	False	NA	NA	False	NA	NA	NA	8008597	8011935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_8009195_8009489_8009572_8009903_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUSG00000055239.11_72819552_72876693_1	chr6	-	1527	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	269	1455	-7	0	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTGTGTGTATTTAT	8734	False	NA	-84	True	NA	NA	NA	72876693	72819551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
ENSMUSG00000055240.18_33599346_33613579_1	chr17	-	2506	4	FSM	ENSMUSG00000055240.18	ENSMUST00000167107.10	2659	4	36	117	0	-117	multi-exon	FALSE	canonical	3	35	junction_1	5.79271573232759	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATGTTTTCATGTAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	33613579	33599345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33601561_33605395_33605442_33605658_33605786_33613461
ENSMUSG00000055302.6_36952211_36953765_1	chr5	-	1297	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	351	0	351	0	multi-exon	FALSE	canonical	3	1678	junction_1	0	1812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCCTGTGTTTAGTTTA	NA	False	NA	41	True	AAGAAA	-22	NA	36953765	36952210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_36953289_36953546
ENSMUSG00000055302.6_36952606_36954116_1	chr5	-	1253	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	0	395	0	-395	multi-exon	FALSE	canonical	3	1678	junction_1	0	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGTAACCTGCCTGGT	NA	False	NA	NA	False	TTTAAA	-18	NA	36954116	36952605	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_36953289_36953546
ENSMUSG00000055305.16_23969845_23976252_1	chr7	+	2541	4	FSM	ENSMUSG00000055305.16	ENSMUST00000108438.10	3508	4	0	967	0	0	multi-exon	TRUE	canonical	3	7	junction_2	2.44948974278318	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTCTGATTTAATTATAA	NA	False	NA	NA	False	NA	NA	NA	23969844	23976252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_23970107_23971037_23971096_23972672_23972800_23974158
ENSMUSG00000055319.9_128346667_128386560_1	chr7	+	4294	20	NNC	ENSMUSG00000055319.9	novel	4505	19	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	2	39	junction_19	26.9453124215669	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTCTCTCCCTGTTTC	1931	False	NA	23	True	AATAAA	-35	NA	128346666	128386560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151_128385885_128386095
ENSMUSG00000055334.5_56858162_56890490_1	chr9	+	1397	9	NNC	ENSMUSG00000055334.5	novel	1391	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_2	66.806506980982	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCTTGTGGTTATTCGG	NA	False	NA	8	True	AATATA	-19	NA	56858161	56890490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_56858238_56864297_56864467_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
ENSMUSG00000055371.18_52582213_52632192_1	chr2	-	4160	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	20	537	0	-537	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTAAATGTGGCTGGT	NA	False	NA	NA	False	AATAAA	-23	NA	52632192	52582212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ENSMUSG00000055371.18_52583373_52632192_1	chr2	-	3000	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	20	1697	0	-1697	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAAATCTTATCGTTTA	NA	False	NA	-5	True	ATTAAA	-18	NA	52632192	52583372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ENSMUSG00000055371.18_52584588_52632192_1	chr2	-	1785	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	20	2912	0	-2912	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTGAAGGCCATAAAAGGT	NA	False	NA	NA	False	AATAAA	-23	NA	52632192	52584587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ENSMUSG00000055373.9_25618796_25799855_1	chr4	-	2379	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	291	9464	0	102	multi-exon	FALSE	canonical	3	36	junction_2	8.5	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTGAAAGATCTATCT	-29	True	NA	NA	False	AATAAA	-8	NA	25799855	25618795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_25620821_25709027_25709115_25799588
ENSMUSG00000055401.15_148230245_148235232_1	chr4	-	1242	6	NNC	ENSMUSG00000055401.15	novel	1163	6	NA	NA	871	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	318.08426556496	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	-18	True	AATAAA	-16	NA	148235232	148230244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148235035
ENSMUSG00000055401.15_148230245_148236178_1	chr4	-	1153	6	FSM	ENSMUSG00000055401.15	ENSMUST00000030858.14	1346	6	192	1	-75	0	multi-exon	FALSE	canonical	3	164	junction_5	252.506158340742	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	-18	True	AATAAA	-16	NA	148236178	148230244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236070
ENSMUSG00000055401.15_148230245_148236448_1	chr4	-	1064	6	NNC	ENSMUSG00000055401.15	novel	1163	6	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	353.763762983152	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	-18	True	AATAAA	-16	NA	148236448	148230244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_148230612_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236398
ENSMUSG00000055401.15_148230245_148236597_1	chr4	-	814	3	NIC	ENSMUSG00000055401.15	novel	952	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	115	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	-18	True	AATAAA	-16	NA	148236597	148230244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_148230643_148233835_148234124_148236469
ENSMUSG00000055401.15_148230245_148236597_2	chr4	-	1213	6	NNC	ENSMUSG00000055401.15	novel	1163	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	353.763762983152	1094	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	-18	True	AATAAA	-16	NA	148236597	148230244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_148230612_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236398
ENSMUSG00000055447.20_49676019_49731444_1	chr16	+	1247	9	NIC	ENSMUSG00000055447.20	novel	1271	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	11.8532695911297	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGAATCCCATTTTT	NA	False	NA	19	True	AATAAA	-23	NA	49676018	49731444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
ENSMUSG00000055491.15_46021032_46033353_1	chr19	+	1814	11	NIC	ENSMUSG00000055491.15	novel	405	3	NA	NA	-12293	-16544	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCGGGCATGAGCCGCTG	NA	False	NA	NA	False	NA	NA	NA	46021031	46033353	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ENSMUSG00000055491.15_46053401_46061243_1	chr19	+	2164	10	ISM	ENSMUSG00000055491.15	ENSMUST00000062322.11	5205	14	8378	105	-2872	3	3prime_fragment	FALSE	canonical	3	238	junction_3	87.5518893761484	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	NA	False	NA	16	True	AATAAA	-18	NA	46053400	46061243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_+_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ENSMUSG00000055531.13_117184757_117212833_1	chr10	-	2305	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	42	4179	0	187	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCCCTTGATTTTGATA	4516	False	NA	0	True	ATTAAA	-19	NA	117212833	117184756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ENSMUSG00000055531.13_117184944_117212875_1	chr10	-	2160	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	0	4366	0	0	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTAAAGCTGTTCACGT	4474	False	NA	-9	True	AATAAA	-16	NA	117212875	117184943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ENSMUSG00000055553.17_70966046_70975754_1	chr8	-	1131	5	NNC	ENSMUSG00000055553.17	novel	1216	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	300.469112389277	2350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTATAGCAACAGTGGCT	NA	False	NA	-13	True	AATAAA	-20	NA	70975754	70966045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_70966810_70968044_70968092_70971014_70971168_70972586_70972712_70975712
ENSMUSG00000055553.17_70966046_70980318_1	chr8	-	1122	5	NIC	ENSMUSG00000055553.17	novel	1216	5	NA	NA	115	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	284.550852221532	2330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTATAGCAACAGTGGCT	NA	False	NA	-13	True	AATAAA	-20	NA	70980318	70966045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70980294
ENSMUSG00000055560.9_67555677_67569530_1	chr13	-	1478	4	FSM	ENSMUSG00000055560.9	ENSMUST00000056470.10	3334	4	7	1849	-3	906	multi-exon	FALSE	canonical	3	28	junction_1	6.23609564462324	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGTGTGATAAAGCCT	NA	False	NA	-24	True	NA	NA	NA	67569530	67555676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67556862_67561226_67561323_67561952_67562080_67569460
ENSMUSG00000055612.16_72306503_72317237_1	chr2	+	2388	9	NNC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	418.47772864873	2293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	8569	False	NA	NA	False	AATAAA	-16	NA	72306502	72317237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313870_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ENSMUSG00000055612.16_72306597_72317237_1	chr2	+	2435	10	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	503.918644227419	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	8663	False	NA	NA	False	AATAAA	-16	NA	72306596	72317237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_72306656_72309249_72309373_72309957_72310063_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ENSMUSG00000055612.16_72306597_72317237_2	chr2	+	2309	10	NNC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	399.431818684713	3591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	8663	False	NA	NA	False	AATAAA	-16	NA	72306596	72317237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_72306656_72309249_72309373_72312034_72312206_72312226_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ENSMUSG00000055612.16_72306597_72317237_3	chr2	+	2324	9	NNC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	411.075114790472	2091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	8663	False	NA	NA	False	AATAAA	-16	NA	72306596	72317237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_72306656_72309255_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ENSMUSG00000055612.16_72306597_72317237_4	chr2	+	2306	10	NNC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	399.431818684713	1648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	8663	False	NA	NA	False	AATAAA	-16	NA	72306596	72317237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_72306656_72309249_72309373_72312034_72312206_72312229_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ENSMUSG00000055612.16_72306597_72317237_5	chr2	+	2307	10	NNC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	399.431818684713	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	8663	False	NA	NA	False	AATAAA	-16	NA	72306596	72317237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_72306656_72309249_72309373_72312034_72312211_72312233_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ENSMUSG00000055629.6_140650188_140652313_1	chr7	+	1333	6	ISM	ENSMUSG00000055629.6	ENSMUST00000209546.2	3076	16	5781	0	0	0	3prime_fragment	FALSE	canonical	3	186	junction_1	17.8706463229509	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140650187	140652313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ENSMUSG00000055629.6_140650188_140652313_2	chr7	+	1234	7	NNC	ENSMUSG00000055629.6	novel	485	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	76.3728063878469	214	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140650187	140652313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_140650225_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ENSMUSG00000055660.10_95034513_95057405_1	chr17	-	2581	9	NIC	ENSMUSG00000055660.10	novel	2560	8	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_6	15.2151240547029	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTATAGTGAGTCTCT	NA	False	NA	NA	False	AATATA	-16	NA	95057405	95034512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
ENSMUSG00000055681.15_70755419_70765640_1	chr8	+	1043	10	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	423.146940593139	2820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	703	False	NA	26	True	AATAAA	-15	NA	70755418	70765640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_70755583_70757283_70757347_70758290_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ENSMUSG00000055681.15_70755419_70765640_2	chr8	+	1043	10	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	425.845853987126	3393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	703	False	NA	26	True	AATAAA	-15	NA	70755418	70765640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761150_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ENSMUSG00000055681.15_70755419_70765640_3	chr8	+	1812	9	NIC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1283	junction_8	36.3180395946698	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	703	False	NA	26	True	AATAAA	-15	NA	70755418	70765640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_70755583_70757283_70757347_70758284_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ENSMUSG00000055681.15_70755419_70765640_4	chr8	+	1127	9	ISM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	251	0	0	0	intron_retention	FALSE	canonical	3	1246	junction_3	46.5025200930014	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	703	False	NA	26	True	AATAAA	-15	NA	70755418	70765640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355
ENSMUSG00000055681.15_70755419_70765640_5	chr8	+	1043	10	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	425.410332052812	1538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	703	False	NA	26	True	AATAAA	-15	NA	70755418	70765640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_70755577_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ENSMUSG00000055681.15_70755419_70765640_6	chr8	+	1044	10	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	423.311023034154	3190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	703	False	NA	26	True	AATAAA	-15	NA	70755418	70765640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764282_70764347_70765355_70765431_70765508
ENSMUSG00000055681.15_70755419_70765640_7	chr8	+	980	9	NIC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	436.980477252703	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	703	False	NA	26	True	AATAAA	-15	NA	70755418	70765640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70765355_70765431_70765508
ENSMUSG00000055707.14_70902918_70929618_1	chr8	-	2871	2	FSM	ENSMUSG00000055707.14	ENSMUST00000166976.3	2734	2	0	-137	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGAGCAGACCTGTGCT	NA	False	NA	-18	True	AATAAA	-16	NA	70929618	70902917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70905670_70929499
ENSMUSG00000055720.11_57818269_57837251_1	chr9	+	1473	12	NIC	ENSMUSG00000055720.11	novel	1364	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	84.997131696865	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818268	57837251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_57818343_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ENSMUSG00000055720.11_57818269_57837251_2	chr9	+	1356	11	NNC	ENSMUSG00000055720.11	novel	1364	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.8200405030823	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818268	57837251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_57818343_57819928_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ENSMUSG00000055746.10_153810197_153816300_1	chrX	-	1592	3	NIC	ENSMUSG00000055746.10	novel	1685	4	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	13	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGCATTTGTAACACTA	NA	False	NA	NA	False	ATTAAA	-19	NA	153816300	153810196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_153811648_153812583_153812673_153816248
ENSMUSG00000055760.13_80531870_80535636_1	chr17	+	844	3	FSM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	0	290	0	-290	multi-exon	FALSE	canonical	3	317	junction_1	34	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGGGTTATAGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	80531869	80535636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_80532100_80533049_80533194_80535166
ENSMUSG00000055760.13_80531870_80535926_1	chr17	+	1021	3	NNC	ENSMUSG00000055760.13	novel	1134	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	185	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATATTTCTATTCTTAA	NA	False	NA	39	True	ATTAAA	-30	NA	80531869	80535926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_80531987_80533049_80533194_80535166
ENSMUSG00000055762.17_75767337_75781155_1	chr15	-	980	8	FSM	ENSMUSG00000055762.17	ENSMUST00000154584.9	2312	8	49	1283	0	0	multi-exon	FALSE	canonical	3	2715	junction_5	241.1927842695	17403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781093
ENSMUSG00000055762.17_75767337_75781155_2	chr15	-	1037	9	NIC	ENSMUSG00000055762.17	novel	2842	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_5	1349.65903101487	14342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75769074_75769132_75772539_75772612_75772980_75773105_75781093
ENSMUSG00000055817.19_84013620_84100304_1	chr17	+	624	7	NNC	ENSMUSG00000055817.19	novel	1728	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	408.841724332969	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTTGTTTTTTTTTTT	NA	False	NA	12	True	AATAAA	-17	NA	84013619	84100304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84100246
ENSMUSG00000055850.13_72336697_72339376_1	chr6	-	1627	4	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	875	junction_1	75.1546553596131	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_72337933_72338099_72338210_72338394_72338523_72339223
ENSMUSG00000055850.13_72336697_72339376_2	chr6	-	1360	5	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_4	391.378652969219	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339258
ENSMUSG00000055850.13_72336697_72339376_3	chr6	-	1387	5	NNC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	389.700205286063	1419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_72337618_72337857_72337933_72338099_72338210_72338394_72338523_72339223
ENSMUSG00000055850.13_72337228_72339376_1	chr6	-	864	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	39	531	0	0	multi-exon	FALSE	canonical	3	875	junction_2	66.4266512779321	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCGGAAATCTCTAGTTA	8447	False	NA	-6	True	GATAAA	-18	NA	72339376	72337227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
ENSMUSG00000055850.13_72337401_72339376_1	chr6	-	691	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	39	704	0	0	multi-exon	FALSE	canonical	3	875	junction_2	66.4266512779321	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCGAAGGTGCCA	8447	False	NA	NA	False	NA	NA	NA	72339376	72337400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
ENSMUSG00000055884.9_65122381_65134204_1	chr12	+	870	4	NNC	ENSMUSG00000055884.9	novel	4050	11	NA	NA	0	-6654	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_3	59.9462722406953	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGATTAAAAAGCAAAAGGA	9284	False	NA	NA	False	NA	NA	NA	65122380	65134204	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134156
ENSMUSG00000055897.14_173437899_173501332_1	chr2	-	789	5	NIC	ENSMUSG00000055897.14	novel	755	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	5.8309518948453	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAATTGTCTCTTTCT	NA	False	NA	NA	False	ATTAAA	-9	NA	173501332	173437898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_173438321_173438832_173438981_173450525_173450673_173501115_173501161_173501305
ENSMUSG00000055900.15_116408728_116413132_1	chr4	-	2067	5	NNC	ENSMUSG00000055900.15	novel	974	3	NA	NA	0	102	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.1150734156725	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGATTGTCTAAGCCT	NA	False	NA	-6	True	AATAAA	-27	NA	116413132	116408727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_116409305_116409502_116409557_116409689_116410927_116411964_116412101_116413069
ENSMUSG00000055900.15_116408728_116413132_2	chr4	-	1735	4	NNC	ENSMUSG00000055900.15	novel	974	3	NA	NA	0	102	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.6204433144888	33844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGATTGTCTAAGCCT	NA	False	NA	-6	True	AATAAA	-27	NA	116413132	116408727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_116409420_116410082_116410927_116411964_116412101_116413069
ENSMUSG00000055900.15_116409316_116413132_1	chr4	-	1147	4	NNC	ENSMUSG00000055900.15	novel	974	3	NA	NA	0	-214	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.6204433144888	33714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTCAAAGTAACTTATT	NA	False	NA	NA	False	NA	NA	NA	116413132	116409315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_116409420_116410082_116410927_116411964_116412101_116413069
ENSMUSG00000055900.15_116409316_116413132_2	chr4	-	1021	4	NNC	ENSMUSG00000055900.15	novel	974	3	NA	NA	0	-214	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.6204433144888	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTCAAAGTAACTTATT	NA	False	NA	NA	False	NA	NA	NA	116413132	116409315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_116409366_116410154_116410927_116411964_116412101_116413069
ENSMUSG00000055912.9_72336697_72339376_1	chr6	+	1387	5	NNC	ENSMUSG00000055912.9	novel	1478	7	NA	NA	3488	2631	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTTTAGGTTGCCGCTG	NA	False	NA	NA	False	NA	NA	NA	72336696	72339376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_72337626_72337857_72337933_72338099_72338202_72338394_72338523_72339223
ENSMUSG00000055912.9_72336697_72339376_2	chr6	+	1392	5	NNC	ENSMUSG00000055912.9	novel	1478	7	NA	NA	3488	2631	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTTTAGGTTGCCGCTG	NA	False	NA	NA	False	NA	NA	NA	72336696	72339376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_72337618_72337852_72337933_72338099_72338210_72338394_72338523_72339223
ENSMUSG00000055912.9_72336697_72339376_3	chr6	+	1390	5	NIC	ENSMUSG00000055912.9	novel	1478	7	NA	NA	3488	2631	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	4265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTTTAGGTTGCCGCTG	NA	False	NA	NA	False	NA	NA	NA	72336696	72339376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_72337626_72337857_72337933_72338104_72338210_72338394_72338523_72339223
ENSMUSG00000055912.9_72336697_72339376_4	chr6	+	1355	5	NIC	ENSMUSG00000055912.9	novel	1478	7	NA	NA	3488	2631	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTTTAGGTTGCCGCTG	NA	False	NA	NA	False	NA	NA	NA	72336696	72339376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_72337626_72337857_72337933_72338104_72338210_72338394_72338523_72339258
ENSMUSG00000055912.9_72336697_72339376_5	chr6	+	1352	5	NNC	ENSMUSG00000055912.9	novel	1478	7	NA	NA	3488	2631	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTTTAGGTTGCCGCTG	NA	False	NA	NA	False	NA	NA	NA	72336696	72339376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_72337618_72337857_72337933_72338099_72338210_72338394_72338523_72339258
ENSMUSG00000055912.9_72336697_72339376_6	chr6	+	1400	5	NNC	ENSMUSG00000055912.9	novel	1478	7	NA	NA	3488	2631	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTTTAGGTTGCCGCTG	NA	False	NA	NA	False	NA	NA	NA	72336696	72339376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_72337626_72337852_72337933_72338099_72338210_72338394_72338523_72339223
ENSMUSG00000055917.16_40365045_40495781_1	chr12	-	2068	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	120	0	-8	0	multi-exon	FALSE	canonical	3	359	junction_6	45.6703965821071	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCATTTTTACTTCTTC	NA	False	NA	NA	False	NA	NA	NA	40495781	40365044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
ENSMUSG00000055917.16_40365558_40495781_1	chr12	-	1555	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	120	513	-8	-513	multi-exon	FALSE	canonical	3	359	junction_6	45.6703965821071	1442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGGACTGAAGAAACTT	NA	False	NA	NA	False	AATAAA	-15	NA	40495781	40365557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
ENSMUSG00000055917.16_40372342_40495781_1	chr12	-	1082	8	ISM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	120	7297	-8	2132	5prime_fragment	FALSE	canonical	3	359	junction_2	44.603010788831	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTAAAGATACTTTTGGG	NA	False	NA	NA	False	AATAAA	-20	NA	40495781	40372341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_-_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
ENSMUSG00000055943.6_112285342_112297782_1	chr2	+	1129	5	NNC	ENSMUSG00000055943.6	novel	5826	5	NA	NA	0	-4725	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	216.128867808074	1825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGATTATCTTCTGTTT	360	False	NA	4	True	ATTAAA	-17	NA	112285341	112297782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_112285646_112289804_112289925_112293117_112293285_112295081_112295163_112297325
ENSMUSG00000055943.6_112285342_112297782_2	chr2	+	935	5	NNC	ENSMUSG00000055943.6	novel	5826	5	NA	NA	0	-4725	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	200.477398975545	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGATTATCTTCTGTTT	360	False	NA	4	True	ATTAAA	-17	NA	112285341	112297782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_112285485_112289809_112289925_112293145_112293285_112295081_112295163_112297325
ENSMUSG00000055943.6_112285342_112297782_3	chr2	+	1101	5	FSM	ENSMUSG00000055943.6	ENSMUST00000069747.6	5826	5	0	4725	0	-4725	multi-exon	FALSE	canonical	3	432	junction_1	48.4355241532493	1833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGATTATCTTCTGTTT	360	False	NA	4	True	ATTAAA	-17	NA	112285341	112297782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_112285646_112289804_112289925_112293145_112293285_112295081_112295163_112297325
ENSMUSG00000055963.13_12906838_12981478_1	chr4	+	1493	5	FSM	ENSMUSG00000055963.13	ENSMUST00000143186.8	888	5	0	-605	0	408	multi-exon	FALSE	canonical	3	8	junction_2	1.6393596310755	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCACATGTTACTTTTA	36	False	NA	NA	False	AATAAA	-14	NA	12906837	12981478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_12906939_12917915_12918066_12962941_12963024_12974729_12974816_12980404
ENSMUSG00000056014.16_138621121_138647098_1	chr5	+	2995	5	NNC	ENSMUSG00000056014.16	novel	3038	4	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_4	11.7686022959398	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGGACACTCTCCTT	1807	False	NA	49	True	AATAAA	-16	NA	138621120	138647098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_138621251_138634425_138634553_138637756_138637850_138644375_138646892_138646969
ENSMUSG00000056076.14_140405523_140429115_1	chr5	+	2505	19	FSM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	440	0	440	0	multi-exon	FALSE	canonical	3	2428	junction_3	310.145868707844	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCCTGATCTCTT	NA	False	NA	15	True	AATAAA	-16	NA	140405522	140429115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ENSMUSG00000056131.14_86437054_86453880_1	chr9	-	2037	13	NNC	ENSMUSG00000056131.14	novel	2666	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	137.476967767938	993	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTTTCGATTGCTTACC	NA	False	NA	-2	True	ATTAAA	-20	NA	86453880	86437053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_86437452_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ENSMUSG00000056131.14_86437054_86453880_2	chr9	-	2277	14	NNC	ENSMUSG00000056131.14	novel	2666	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	173.196847341382	980	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTTTCGATTGCTTACC	NA	False	NA	-2	True	ATTAAA	-20	NA	86453880	86437053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86452640_86452876_86453782
ENSMUSG00000056153.16_88886298_88912340_1	chr18	-	2999	4	FSM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	136	-321	0	0	multi-exon	FALSE	canonical	3	64	junction_2	64.5652125115891	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCTTTACAGTGTGCT	NA	False	NA	NA	False	AATAGA	-35	NA	88912340	88886297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_88889043_88905115_88905190_88905332_88905458_88912285
ENSMUSG00000056153.16_88886619_88912340_1	chr18	-	2604	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	106	3326	0	0	multi-exon	FALSE	canonical	3	70	junction_1	76	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAATTGTTGCCTTTT	NA	False	NA	-5	True	ATTAAA	-25	NA	88912340	88886618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_88889043_88905332_88905458_88912285
ENSMUSG00000056153.16_88886619_88912340_3	chr18	-	2678	4	FSM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	136	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	64.5652125115891	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAATTGTTGCCTTTT	NA	False	NA	-5	True	ATTAAA	-25	NA	88912340	88886618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_88889043_88905115_88905190_88905332_88905458_88912285
ENSMUSG00000056167.9_114415172_114469031_1	chr9	-	2516	20	FSM	ENSMUSG00000056167.9	ENSMUST00000070117.8	2853	20	111	226	0	-138	multi-exon	FALSE	canonical	3	122	junction_5	120.736887991548	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTGTTGTTGGTTT	NA	False	NA	-15	True	TATAAA	-15	NA	114469031	114415171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUSG00000056167.9_114415172_114469134_1	chr9	-	2619	20	FSM	ENSMUSG00000056167.9	ENSMUST00000070117.8	2853	20	8	226	0	-138	multi-exon	FALSE	canonical	3	122	junction_5	120.736887991548	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTGTTGTTGGTTT	NA	False	NA	-15	True	TATAAA	-15	NA	114469134	114415171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUSG00000056167.9_114415172_114469134_2	chr9	-	2583	19	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	0	-138	combination_of_known_splicesites	FALSE	canonical	3	267	junction_4	76.1876338755546	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTGTTGTTGGTTT	NA	False	NA	-15	True	TATAAA	-15	NA	114469134	114415171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUSG00000056167.9_114415172_114469254_1	chr9	-	2703	19	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-2	-138	combination_of_known_splicesites	FALSE	canonical	3	267	junction_4	76.1876338755546	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTGTTGTTGGTTT	NA	False	NA	-15	True	TATAAA	-15	NA	114469254	114415171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUSG00000056167.9_114415172_114469254_2	chr9	-	2739	20	FSM	ENSMUSG00000056167.9	ENSMUST00000070117.8	2853	20	-112	226	-2	-138	multi-exon	FALSE	canonical	3	122	junction_5	120.736887991548	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTGTTGTTGGTTT	NA	False	NA	-15	True	TATAAA	-15	NA	114469254	114415171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUSG00000056185.6_5540544_5544059_1	chr19	-	1108	4	NNC	ENSMUSG00000056185.6	novel	2229	12	NA	NA	3334	1719	intron_retention	FALSE	non_canonical	0	0	junction_1	0	7346	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCCGGCCCCTTCCGTT	NA	False	NA	NA	False	NA	NA	NA	5544059	5540543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_5540616_5542524_5542833_5543182_5543260_5543408
ENSMUSG00000056185.6_5540544_5544059_11	chr19	-	1115	4	NNC	ENSMUSG00000056185.6	novel	2229	12	NA	NA	3334	1719	intron_retention	FALSE	non_canonical	0	0	junction_1	0	6415	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCCGGCCCCTTCCGTT	NA	False	NA	NA	False	NA	NA	NA	5544059	5540543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_5540631_5542524_5542833_5543182_5543260_5543416
ENSMUSG00000056185.6_5540544_5544059_12	chr19	-	897	5	NNC	ENSMUSG00000056185.6	novel	2229	12	NA	NA	3334	1719	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCCGGCCCCTTCCGTT	NA	False	NA	NA	False	NA	NA	NA	5544059	5540543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_5540631_5542524_5542833_5543182_5543260_5543408_5543576_5543801
ENSMUSG00000056185.6_5540544_5544059_2	chr19	-	822	4	NNC	ENSMUSG00000056185.6	novel	2229	12	NA	NA	3334	1719	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1642	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCCGGCCCCTTCCGTT	NA	False	NA	NA	False	NA	NA	NA	5544059	5540543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_5540631_5542524_5542833_5543182_5543260_5543709
ENSMUSG00000056185.6_5540544_5544059_3	chr19	-	1013	5	NNC	ENSMUSG00000056185.6	novel	2229	12	NA	NA	3334	1719	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1593	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCCGGCCCCTTCCGTT	NA	False	NA	NA	False	NA	NA	NA	5544059	5540543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_5540631_5542524_5542833_5543182_5543260_5543408_5543836_5543945
ENSMUSG00000056185.6_5540544_5544059_4	chr19	-	497	3	NNC	ENSMUSG00000056185.6	novel	2229	12	NA	NA	3334	1719	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCCGGCCCCTTCCGTT	NA	False	NA	NA	False	NA	NA	NA	5544059	5540543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_5540631_5542524_5542719_5543843
ENSMUSG00000056185.6_5540544_5544059_5	chr19	-	980	4	NNC	ENSMUSG00000056185.6	novel	2229	12	NA	NA	3334	1719	intron_retention	FALSE	non_canonical	0	0	junction_1	0	2856	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCCGGCCCCTTCCGTT	NA	False	NA	NA	False	NA	NA	NA	5544059	5540543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_5540631_5542524_5542690_5543182_5543260_5543408
ENSMUSG00000056185.6_5540544_5544059_6	chr19	-	1099	5	NNC	ENSMUSG00000056185.6	novel	2229	12	NA	NA	3334	1719	intron_retention	FALSE	non_canonical	0	0	junction_1	0	4327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCCGGCCCCTTCCGTT	NA	False	NA	NA	False	NA	NA	NA	5544059	5540543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_5540631_5542524_5542682_5542705_5542833_5543182_5543260_5543408
ENSMUSG00000056185.6_5540544_5544059_7	chr19	-	328	3	NNC	ENSMUSG00000056185.6	novel	2229	12	NA	NA	3334	1719	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCCGGCCCCTTCCGTT	NA	False	NA	NA	False	NA	NA	NA	5544059	5540543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_5540631_5542524_5542658_5543951
ENSMUSG00000056185.6_5540544_5544059_8	chr19	-	1109	4	NNC	ENSMUSG00000056185.6	novel	2229	12	NA	NA	3334	1719	intron_retention	FALSE	non_canonical	0	0	junction_1	0	7129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCCGGCCCCTTCCGTT	NA	False	NA	NA	False	NA	NA	NA	5544059	5540543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_5540631_5542524_5542819_5543182_5543260_5543408
ENSMUSG00000056185.6_5540544_5544059_9	chr19	-	1118	4	NNC	ENSMUSG00000056185.6	novel	2229	12	NA	NA	3334	1719	intron_retention	FALSE	non_canonical	0	0	junction_1	0	22528	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCCGGCCCCTTCCGTT	NA	False	NA	NA	False	NA	NA	NA	5544059	5540543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_5540631_5542524_5542833_5543187_5543260_5543408
ENSMUSG00000056201.9_5540544_5543731_1	chr19	+	795	4	FSM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	61	1498	0	124	multi-exon	FALSE	canonical	3	6173	junction_3	71.2850303749361	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATCTTCTGATTCCTC	NA	False	NA	NA	False	NA	NA	NA	5540543	5543731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408
ENSMUSG00000056201.9_5540544_5543848_1	chr19	+	912	4	FSM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	61	1381	0	-209	multi-exon	FALSE	canonical	3	6173	junction_3	71.2850303749361	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATGCTGCCAACTTCTA	NA	False	NA	-72	True	NA	NA	NA	5540543	5543848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408
ENSMUSG00000056201.9_5540544_5544059_1	chr19	+	1113	4	NNC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_2	2951.60171206528	12829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTTTGGGTTTGGGA	NA	False	NA	14	True	NA	NA	NA	5540543	5544059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_5540631_5542524_5542833_5543192_5543260_5543408
ENSMUSG00000056201.9_5540544_5544059_2	chr19	+	1123	4	FSM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	61	1170	0	2	multi-exon	FALSE	canonical	3	6173	junction_3	71.2850303749361	26968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTTTGGGTTTGGGA	NA	False	NA	14	True	NA	NA	NA	5540543	5544059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408
ENSMUSG00000056204.9_71101726_71112331_1	chr8	-	2185	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	57	2641	-13	1102	multi-exon	FALSE	canonical	3	150	junction_1	24.3554408705735	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGAGTGGTTGGCTCTC	NA	False	NA	-6	True	NA	NA	NA	71112331	71101725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
ENSMUSG00000056204.9_71102532_71112331_1	chr8	-	1379	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	57	3447	-13	296	multi-exon	FALSE	canonical	3	150	junction_1	24.3554408705735	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGAGGGTATTTGTTGT	NA	False	NA	-13	True	NA	NA	NA	71112331	71102531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
ENSMUSG00000056204.9_71102828_71112331_1	chr8	-	1083	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	57	3743	-13	0	multi-exon	FALSE	canonical	3	150	junction_1	24.3554408705735	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTGCTAGAACAGAACAG	NA	False	NA	NA	False	NA	NA	NA	71112331	71102827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
ENSMUSG00000056209.8_45736173_45738003_1	chr19	-	856	6	NNC	ENSMUSG00000056209.8	novel	888	6	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.33508128684	4968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGGCTTTTTCAA	4914	False	NA	0	True	AATAAA	-27	NA	45738003	45736172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_45736486_45736602_45736720_45736984_45737079_45737188_45737309_45737495_45737582_45737877
ENSMUSG00000056234.16_31881895_31899964_1	chr14	+	2144	10	FSM	ENSMUSG00000056234.16	ENSMUST00000163336.8	4065	10	73	1848	0	79	multi-exon	TRUE	canonical	3	533	junction_6	51.0289194210886	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTTCAAGTGGAGGTGA	NA	False	NA	NA	False	AGTAAA	-35	NA	31881894	31899964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ENSMUSG00000056234.16_31881895_31900511_1	chr14	+	2691	10	FSM	ENSMUSG00000056234.16	ENSMUST00000163336.8	4065	10	73	1301	0	626	multi-exon	FALSE	canonical	3	533	junction_6	51.0289194210886	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGTAAAAAGTGTTAGG	NA	False	NA	NA	False	ACTAAA	-16	NA	31881894	31900511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ENSMUSG00000056234.16_31881895_31901205_1	chr14	+	3385	10	FSM	ENSMUSG00000056234.16	ENSMUST00000163336.8	4065	10	73	607	0	1	multi-exon	FALSE	canonical	3	533	junction_6	51.0289194210886	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTTGTGTTTGTGTTA	NA	False	NA	-1	True	ATTAAA	-14	NA	31881894	31901205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ENSMUSG00000056260.16_106592303_106643893_1	chr3	+	1602	3	FSM	ENSMUSG00000056260.16	ENSMUST00000098751.10	929	3	0	-673	0	0	multi-exon	FALSE	canonical	3	7	junction_1	16.5	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTATGGCTTTGTTTTGT	NA	False	NA	31	True	AATAAA	-43	NA	106592302	106643893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_106592450_106641673_106641956_106642720
ENSMUSG00000056267.15_99125495_99146983_1	chr9	+	1833	6	FSM	ENSMUSG00000056267.15	ENSMUST00000185799.7	740	6	75	-1168	0	2	multi-exon	TRUE	canonical	3	66	junction_1	121.109867475776	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTCTTGGTCATCATGT	NA	False	NA	9	True	NA	NA	NA	99125494	99146983	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_99125544_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681
ENSMUSG00000056300.15_146289371_146627265_1	chr4	+	954	5	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-297113	3413	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_4	148.132542002087	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	2312	False	NA	NA	False	NA	NA	NA	146289370	146627265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146289526_146597241_146597335_146616526_146616611_146619877_146620005_146626770
ENSMUSG00000056300.15_146289371_146627265_2	chr4	+	1034	6	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-297113	3413	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	149.231900075017	797	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	2312	False	NA	NA	False	NA	NA	NA	146289370	146627265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146289526_146597241_146597335_146603534_146603615_146616526_146616611_146619877_146620005_146626770
ENSMUSG00000056300.15_146599377_146627265_1	chr4	+	829	4	NNC	ENSMUSG00000056300.15	novel	578	4	NA	NA	0	3413	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	181.726901329073	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	146599376	146627265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146599500_146616526_146616611_146619877_146620005_146626770
ENSMUSG00000056310.15_130284460_130369998_1	chr5	+	2506	16	NIC	ENSMUSG00000056310.15	novel	4698	9	NA	NA	0	-406	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	68.4530658350831	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGGCTTTGTCCTTAC	3512	False	NA	20	True	AATAAA	-23	NA	130284459	130369998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_130284487_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ENSMUSG00000056310.15_130285876_130369998_1	chr5	+	2638	16	FSM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	0	406	0	-406	multi-exon	FALSE	canonical	3	235	junction_10	31.6406208676266	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGGCTTTGTCCTTAC	4928	False	NA	20	True	AATAAA	-23	NA	130285875	130369998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ENSMUSG00000056342.17_23439736_23447839_1	chr11	+	1643	9	Fusion	ENSMUSG00000056342.17_ENSMUSG00000086459.3	novel	555	3	NA	NA	2931	-807	multi-exon	FALSE	non_canonical	0	0	junction_1	0	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACTTGGCCATGGCGG	NA	False	NA	NA	False	NA	NA	NA	23439735	23447839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr11_+_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ENSMUSG00000056342.17_23439736_23447959_1	chr11	+	1763	9	Fusion	ENSMUSG00000056342.17_ENSMUSG00000086459.3	novel	555	3	NA	NA	2931	-687	multi-exon	FALSE	non_canonical	0	0	junction_1	0	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGGCCGCCCCGGCCA	NA	False	NA	NA	False	NA	NA	NA	23439735	23447959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr11_+_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ENSMUSG00000056394.21_13012752_13045351_1	chr7	+	3082	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	345.738195550948	1254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2620	False	NA	31	True	AATAAA	-19	NA	13012751	13045351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044943_13045027_13045120
ENSMUSG00000056394.21_13012752_13045351_2	chr7	+	3080	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	352.785039295344	1905	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2620	False	NA	31	True	AATAAA	-19	NA	13012751	13045351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023331_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ENSMUSG00000056394.21_13012752_13045351_3	chr7	+	3098	28	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	347.18983947761	2674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2620	False	NA	31	True	AATAAA	-19	NA	13012751	13045351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023313_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ENSMUSG00000056394.21_13012752_13045351_4	chr7	+	3084	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	352.624204932075	1580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2620	False	NA	31	True	AATAAA	-19	NA	13012751	13045351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022597_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ENSMUSG00000056436.5_76184286_76190794_1	chr2	-	626	3	NIC	ENSMUSG00000056436.5	novel	655	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	94.5	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCGTTATGTTTATGA	NA	False	NA	1	True	AATAAA	-30	NA	76190794	76184285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_76184581_76186423_76186617_76190656
ENSMUSG00000056458.17_110774232_110805526_1	chr12	-	1470	11	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1835	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_10	69.773992289391	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	9507	False	NA	-3	True	AATATA	-18	NA	110805526	110774231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
ENSMUSG00000056458.17_110774232_110805526_2	chr12	-	1483	10	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1835	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_8	78.692086288549	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	9507	False	NA	-3	True	AATATA	-18	NA	110805526	110774231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110805381
ENSMUSG00000056458.17_110774232_110807361_1	chr12	-	1225	8	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	98.0137433095534	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7672	False	NA	-3	True	AATATA	-18	NA	110807361	110774231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110774556_110774638_110774834_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110807179
ENSMUSG00000056458.17_110774232_110807361_2	chr12	-	1507	11	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_10	69.6330381356436	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7672	False	NA	-3	True	AATATA	-18	NA	110807361	110774231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
ENSMUSG00000056458.17_110774232_110807361_3	chr12	-	1265	9	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	98.5228399915471	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7672	False	NA	-3	True	AATATA	-18	NA	110807361	110774231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110807260
ENSMUSG00000056458.17_110774232_110807361_4	chr12	-	1368	9	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	86.7942070359537	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7672	False	NA	-3	True	AATATA	-18	NA	110807361	110774231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110807179
ENSMUSG00000056458.17_110774232_110807361_5	chr12	-	1405	9	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_8	74.9615526453395	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7672	False	NA	-3	True	AATATA	-18	NA	110807361	110774231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110807179
ENSMUSG00000056459.15_76395718_76416254_1	chr12	-	1551	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176278.8	1672	3	122	-1	-16	0	multi-exon	FALSE	canonical	3	78	junction_2	3	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGAGCTTTTCTATAC	NA	False	NA	-1	True	ATTAAA	-17	NA	76416254	76395717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_76397048_76402662_76402843_76416213
ENSMUSG00000056486.19_73442680_73605438_1	chr2	-	2122	13	FSM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	252	1676	-27	0	multi-exon	FALSE	canonical	1	103	junction_1	53.6273147648555	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAATAGCTTTTTTTCTT	NA	False	NA	59	True	ATTAAA	-23	NA	73605438	73442679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ENSMUSG00000056515.10_65958724_66079637_1	chr17	-	3363	7	FSM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	110	0	-2	0	multi-exon	TRUE	canonical	3	62	junction_1	10.1775897605147	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGTCCTTTCCTCATT	NA	False	NA	0	True	AATAAA	-15	NA	66079637	65958723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002_66029083_66079500
ENSMUSG00000056531.12_108280741_108284131_1	chr5	+	560	3	ISM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-39	97363	0	-3310	5prime_fragment	FALSE	canonical	2	80	junction_2	6.5	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATGAGTGTTTTGTCT	1104	False	NA	NA	False	AATATA	-20	NA	108280740	108284131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_108280865_108283287_108283431_108283838
ENSMUSG00000056537.12_103005984_103024890_1	chrX	-	2214	5	FSM	ENSMUSG00000056537.12	ENSMUST00000070705.6	7429	5	0	5215	0	-5215	multi-exon	FALSE	canonical	3	128	junction_4	35.6300435026397	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTCATTGCTTTCTTAG	2373	False	NA	NA	False	TATAAA	-14	NA	103024890	103005983	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024678
ENSMUSG00000056602.14_150119931_150317702_1	chr5	+	2881	21	NIC	ENSMUSG00000056602.14	novel	592	4	NA	NA	0	3379	combination_of_known_junctions	FALSE	canonical	3	12	junction_20	3.46806862677197	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGTGCCCGTGTGTGTC	1275	False	NA	NA	False	NA	NA	NA	150119930	150317702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_150120201_150233734_150233935_150249595_150249650_150263817_150263958_150269017_150269109_150269315_150269396_150269510_150269592_150277938_150278108_150282263_150282357_150282454_150282554_150284579_150284682_150292933_150293038_150293591_150293701_150295986_150296074_150302273_150302446_150304262_150304396_150305080_150305189_150309449_150309709_150312237_150312421_150314100_150314188_150317442
ENSMUSG00000056612.8_6952819_6954692_1	chr19	+	516	4	FSM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	483	0	136	0	multi-exon	FALSE	canonical	3	3100	junction_3	78.5295415043848	741	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGGCTGGTCTTTTA	2063	False	NA	NA	False	AATAAA	-29	NA	6952818	6954692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6952875_6953911_6953996_6954225_6954259_6954349
ENSMUSG00000056629.17_6955112_6957808_1	chr19	-	597	6	NNC	ENSMUSG00000056629.17	novel	664	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	286.644309205677	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGAGTGAGTCTGTATT	NA	False	NA	-6	True	TTTAAA	-32	NA	6957808	6955111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956033_6956340_6956510_6957761
ENSMUSG00000056629.17_6955112_6957808_11	chr19	-	590	5	NNC	ENSMUSG00000056629.17	novel	664	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	287.976887093392	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGAGTGAGTCTGTATT	NA	False	NA	-6	True	TTTAAA	-32	NA	6957808	6955111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6955326_6955757_6955805_6955925_6956039_6956340_6956510_6957761
ENSMUSG00000056629.17_6955112_6957808_4	chr19	-	544	6	NNC	ENSMUSG00000056629.17	novel	642	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	275.879973901695	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGAGTGAGTCTGTATT	NA	False	NA	-6	True	TTTAAA	-32	NA	6957808	6955111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956451_6957761
ENSMUSG00000056666.14_72575458_72584471_1	chr6	+	2090	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	0	937	0	46	multi-exon	FALSE	canonical	3	404	junction_1	54.9894535342915	1941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGTTGTTAAGTCAAGA	NA	False	NA	17	True	TATAAA	-22	NA	72575457	72584471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ENSMUSG00000056666.14_72575611_72584364_1	chr6	+	1830	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	153	1044	0	0	multi-exon	FALSE	canonical	3	404	junction_1	54.9894535342915	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGTTCAGAGAAGAGCCAG	NA	False	NA	-90	True	NA	NA	NA	72575610	72584364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ENSMUSG00000056666.14_72575611_72584471_1	chr6	+	1937	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	153	937	0	46	multi-exon	FALSE	canonical	3	404	junction_1	54.9894535342915	1895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGTTGTTAAGTCAAGA	NA	False	NA	17	True	TATAAA	-22	NA	72575610	72584471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ENSMUSG00000056671.8_42008665_42084282_1	chr18	-	769	6	NIC	ENSMUSG00000056671.8	novel	868	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	138.005217292681	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTTTCTCCAAATGT	NA	False	NA	-14	True	AATAAA	-23	NA	42084282	42008664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42070698_42070757_42084165
ENSMUSG00000056671.8_42008665_42084282_2	chr18	-	838	7	NNC	ENSMUSG00000056671.8	novel	868	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	133.893510754712	1478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTTTCTCCAAATGT	NA	False	NA	-14	True	AATAAA	-23	NA	42084282	42008664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_42008914_42014277_42014351_42045434_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
ENSMUSG00000056682.9_77719193_77802186_1	chr18	+	4928	4	Genic_Genomic	ENSMUSG00000056682.9	novel	1238	3	NA	NA	-82717	-963	multi-exon	TRUE	non_canonical	0	0	junction_1	0	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGGGCTTGCGGCGAGCGC	4990	False	NA	NA	False	NA	NA	NA	77719192	77802186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_+_77723025_77730763_77730891_77761595_77762381_77802002
ENSMUSG00000056682.9_77720869_77802186_2	chr18	+	3252	4	Genic_Genomic	ENSMUSG00000056682.9	novel	1238	3	NA	NA	-81041	-963	multi-exon	FALSE	non_canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGGGCTTGCGGCGAGCGC	6666	False	NA	NA	False	NA	NA	NA	77720868	77802186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_+_77723025_77730763_77730891_77761595_77762381_77802002
ENSMUSG00000056687.10_109253788_109287413_1	chr11	-	1247	4	NIC	ENSMUSG00000056687.10	novel	450	3	NA	NA	-32933	-7780	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCCTCGGCGGGCCCCTG	2149	False	NA	NA	False	NA	NA	NA	109287413	109253787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_109254083_109256361_109256589_109283171_109283223_109286739
ENSMUSG00000056718.3_5850064_5873551_1	chr2	-	1447	10	NNC	ENSMUSG00000056718.3	novel	617	3	NA	NA	-5806	16827	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	426	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGTCCTCCTCCAGGCAC	NA	False	NA	NA	False	NA	NA	NA	5873551	5850063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_5850197_5852931_5853002_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ENSMUSG00000056718.3_5850064_5873551_2	chr2	-	1487	9	NIC	ENSMUSG00000056718.3	novel	617	3	NA	NA	-5806	16827	intron_retention	FALSE	non_canonical	0	0	junction_1	0	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGTCCTCCTCCAGGCAC	NA	False	NA	NA	False	NA	NA	NA	5873551	5850063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871043_5871219_5872899
ENSMUSG00000056737.15_72521374_72539966_1	chr6	+	1239	9	NNC	ENSMUSG00000056737.15	novel	1247	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.9147698360563	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	False	NA	12	True	AATAAA	-23	NA	72521373	72539966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_72521450_72532431_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ENSMUSG00000056737.15_72526434_72539966_1	chr6	+	1214	9	NNC	ENSMUSG00000056737.15	novel	1400	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.9147698360563	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	False	NA	12	True	AATAAA	-23	NA	72526433	72539966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_72526485_72532431_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ENSMUSG00000056763.17_10095068_10108393_1	chr1	+	1497	8	NIC	ENSMUSG00000056763.17	novel	345	3	NA	NA	-13144	-1174	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	3261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGGCCTGCCAGGAAG	NA	False	NA	NA	False	NA	NA	NA	10095067	10108393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
ENSMUSG00000056763.17_10095068_10108393_2	chr1	+	1505	8	NIC	ENSMUSG00000056763.17	novel	345	3	NA	NA	-13144	-1174	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	3230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGGCCTGCCAGGAAG	NA	False	NA	NA	False	NA	NA	NA	10095067	10108393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107886
ENSMUSG00000056763.17_10095068_10108393_3	chr1	+	1248	8	NIC	ENSMUSG00000056763.17	novel	345	3	NA	NA	-13144	-1174	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGGCCTGCCAGGAAG	NA	False	NA	NA	False	NA	NA	NA	10095067	10108393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10108143
ENSMUSG00000056770.16_108072925_108145499_1	chr12	-	2446	13	FSM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	74	235	-13	0	multi-exon	FALSE	canonical	3	469	junction_9	51.1017503505397	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATTTGTTTACTTTTTG	NA	False	NA	-67	True	CATAAA	-26	NA	108145499	108072924	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ENSMUSG00000056851.15_102379088_102407324_1	chr15	+	1560	13	NNC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	170.884037190917	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2123	False	NA	13	True	ATTAAA	-13	NA	102379087	102407324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_102379239_102381719_102381862_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102379088_102407324_2	chr15	+	1560	14	NIC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	147.555385248985	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2123	False	NA	13	True	ATTAAA	-13	NA	102379087	102407324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102379088_102407324_3	chr15	+	1650	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	149.78596975249	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2123	False	NA	13	True	ATTAAA	-13	NA	102379087	102407324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102379088_102407324_5	chr15	+	1665	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	0	8	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	165.568162176581	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2123	False	NA	13	True	ATTAAA	-13	NA	102379087	102407324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102379088_102407324_6	chr15	+	1572	14	NIC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	0	8	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	169.151939682124	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2123	False	NA	13	True	ATTAAA	-13	NA	102379087	102407324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102379088_102407324_9	chr15	+	1689	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	0	8	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	164.508730616279	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2123	False	NA	13	True	ATTAAA	-13	NA	102379087	102407324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102379220_102383199_1	chr15	+	384	5	ISM	ENSMUSG00000056851.15	ENSMUST00000229102.2	893	9	153	11276	0	0	5prime_fragment	FALSE	canonical	3	49	junction_1	67.2434941090958	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCTATATACCCTCAGT	2255	False	NA	12	True	AATAAA	-25	NA	102379219	102383199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009
ENSMUSG00000056851.15_102379220_102407324_10	chr15	+	1533	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	0	8	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	165.568162176581	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2255	False	NA	13	True	ATTAAA	-13	NA	102379219	102407324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102379220_102407324_12	chr15	+	1452	14	FSM	ENSMUSG00000056851.15	ENSMUST00000229618.2	1576	14	132	-8	0	8	multi-exon	FALSE	canonical	3	59	junction_1	146.176678378513	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2255	False	NA	13	True	ATTAAA	-13	NA	102379219	102407324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102379220_102407324_4	chr15	+	1518	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	149.78596975249	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2255	False	NA	13	True	ATTAAA	-13	NA	102379219	102407324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102379220_102407324_5	chr15	+	1440	14	NIC	ENSMUSG00000056851.15	novel	2571	13	NA	NA	0	8	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	169.151939682124	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2255	False	NA	13	True	ATTAAA	-13	NA	102379219	102407324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102379220_102407324_6	chr15	+	1464	14	FSM	ENSMUSG00000056851.15	ENSMUST00000229802.2	1215	14	20	-269	0	8	multi-exon	FALSE	non_canonical	0	0	junction_7	168.031977796282	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2255	False	NA	13	True	ATTAAA	-13	NA	102379219	102407324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102379220_102407324_8	chr15	+	1428	14	NIC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	147.555385248985	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2255	False	NA	13	True	ATTAAA	-13	NA	102379219	102407324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102379220_102407324_9	chr15	+	1557	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	0	8	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	164.508730616279	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	2255	False	NA	13	True	ATTAAA	-13	NA	102379219	102407324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102381716_102407324_1	chr15	+	1515	14	NIC	ENSMUSG00000056851.15	novel	1086	14	NA	NA	0	8	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_6	160.754544783776	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	4751	False	NA	13	True	ATTAAA	-13	NA	102381715	102407324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_102395521_102407324_1	chr15	+	744	5	ISM	ENSMUSG00000056851.15	ENSMUST00000229432.2	553	7	3888	-355	1107	8	3prime_fragment	FALSE	canonical	3	22	junction_2	228.75204917115	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTCTTTGTGAATAGA	1420	False	NA	13	True	ATTAAA	-13	NA	102395520	102407324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_102395565_102396639_102396713_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056870.10_44590853_44835998_1	chr1	+	2956	11	FSM	ENSMUSG00000056870.10	ENSMUST00000074525.10	3138	11	182	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	3.104834939252	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGATATGCTCACTTA	NA	False	NA	NA	False	AATAAA	-20	NA	44590852	44835998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_44591033_44728303_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173_44805312_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ENSMUSG00000056880.13_115869661_115870172_1	chr9	+	462	2	NNC	ENSMUSG00000056880.14	novel	1683	15	NA	NA	131138	-109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGAATCATGGGAGA	NA	False	NA	NA	False	NA	NA	NA	115869660	115870172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_115870001_115870050
ENSMUSG00000056888.12_111808680_111822000_1	chr10	-	2575	10	NIC	ENSMUSG00000056888.12	novel	1183	7	NA	NA	7393	12673	intron_retention	TRUE	non_canonical	0	0	junction_1	0	1068	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCCGGAAGTGGAACTGT	NA	False	NA	NA	False	NA	NA	NA	111822000	111808679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ENSMUSG00000056917.14_5701213_5704326_1	chr19	-	1354	8	ISM	ENSMUSG00000056917.14	ENSMUST00000236006.2	3513	16	7337	-6	539	0	3prime_fragment	TRUE	canonical	3	60	junction_4	8.27832182540024	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTGTGTTCA	NA	False	NA	0	True	AAAAAG	-27	NA	5704326	5701212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026
ENSMUSG00000056938.17_102992552_103003026_1	chr11	+	1487	7	NNC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	0	0	intron_retention	FALSE	non_canonical	3	16	junction_6	50.5022001720937	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992551	103003026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_102992615_102993507_102993923_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995359_103002437
ENSMUSG00000056938.17_102993902_103003026_1	chr11	+	1766	10	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_1	35.1346615814703	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102993901	103003026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_102993972_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ENSMUSG00000056938.17_102993902_103003026_2	chr11	+	1631	9	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_1	32.3138902022025	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102993901	103003026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_102993972_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ENSMUSG00000056962.12_116728259_116733708_2	chr11	-	1444	5	ISM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	567	1	-162	0	3prime_fragment	FALSE	canonical	3	250	junction_2	32.8252951243397	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGGACAGCTTTCTT	NA	False	NA	-8	True	AATAAA	-15	NA	116733708	116728258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157
ENSMUSG00000056962.12_116728259_116734119_1	chr11	-	1511	6	FSM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	156	1	-3	0	multi-exon	FALSE	canonical	3	250	junction_2	32.356761271796	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGGACAGCTTTCTT	NA	False	NA	-8	True	AATAAA	-15	NA	116734119	116728258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157_116733547_116733890
ENSMUSG00000056999.17_37247983_37340024_1	chr19	-	2791	23	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-14	-154	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	175.242830343432	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340024	37247982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ENSMUSG00000056999.17_37247983_37340024_2	chr19	-	3334	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-14	-154	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_24	212.273385990802	771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340024	37247982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37339912
ENSMUSG00000056999.17_37247983_37340024_3	chr19	-	3232	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-14	1841	-14	-154	multi-exon	FALSE	canonical	3	707	junction_13	63.1947496940125	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340024	37247982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ENSMUSG00000056999.17_37306497_37340024_1	chr19	-	388	3	ISM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-14	60355	-14	-25448	5prime_fragment	FALSE	canonical	3	808	junction_2	5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATAGCCAGTTTCTCA	NA	False	NA	NA	False	AAGAAA	-15	NA	37340024	37306496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_37306588_37307826_37308012_37339912
ENSMUSG00000057036.8_24387232_24387751_1	chr3	+	476	2	Genic_Genomic	ENSMUSG00000057036.8	novel	444	1	NA	NA	0	76	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTAGTACCTATTTA	NA	False	NA	NA	False	NA	NA	NA	24387231	24387751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_24387515_24387558
ENSMUSG00000057036.8_24387232_24387751_2	chr3	+	444	2	Genic_Genomic	ENSMUSG00000057036.8	novel	444	1	NA	NA	0	76	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTAGTACCTATTTA	NA	False	NA	NA	False	NA	NA	NA	24387231	24387751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_24387299_24387374
ENSMUSG00000057036.8_24387232_24387751_3	chr3	+	423	2	Genic_Genomic	ENSMUSG00000057036.8	novel	444	1	NA	NA	0	76	multi-exon	FALSE	canonical	0	0	junction_1	0	4181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTAGTACCTATTTA	NA	False	NA	NA	False	NA	NA	NA	24387231	24387751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_24387374_24387470
ENSMUSG00000057093.15_27388886_27401914_1	chr7	+	496	6	FSM	ENSMUSG00000057093.15	ENSMUST00000120004.8	4612	6	121	3995	121	-1578	multi-exon	FALSE	canonical	2	13	junction_1	18.2362276800878	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTACTTTTAGTGATGG	NA	False	NA	12	True	AGTAAA	-16	NA	27388885	27401914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27388912_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ENSMUSG00000057110.16_34999504_35019822_1	chr2	+	1817	11	FSM	ENSMUSG00000057110.16	ENSMUST00000028235.11	2734	11	0	917	0	-917	multi-exon	FALSE	canonical	3	34	junction_10	5.89576118919347	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATGTAAGTAAAATGGGA	NA	False	NA	NA	False	NA	NA	NA	34999503	35019822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632
ENSMUSG00000057113.14_33102511_33113077_1	chr11	-	1277	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5941.6931265423	137868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113077	33102510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_33102853_33103985_33104061_33106002_33106098_33106659_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUSG00000057113.14_33102511_33113077_2	chr11	-	1276	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6157.24081143494	136921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113077	33102510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110433_33110823_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUSG00000057113.14_33104927_33113077_1	chr11	-	1151	10	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	1051	junction_6	7636.61791212592	22367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGGATGTATGTGACAA	NA	False	NA	-22	True	AATAAA	-15	NA	33113077	33104926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110435_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUSG00000057113.14_33104927_33113077_2	chr11	-	1154	10	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7581.32144903382	24096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGGATGTATGTGACAA	NA	False	NA	-22	True	AATAAA	-15	NA	33113077	33104926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_33105221_33106002_33106098_33106659_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUSG00000057123.15_96778409_96812638_1	chr3	+	1762	14	NIC	ENSMUSG00000057123.15	novel	3668	4	NA	NA	-33600	-145551	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTACGTCATCAAGATG	NA	False	NA	NA	False	NA	NA	NA	96778408	96812638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
ENSMUSG00000057130.13_80250061_80265553_1	chr18	+	510	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	51	3517	-17	0	multi-exon	FALSE	canonical	3	2407	junction_2	310.116465577406	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGATACTGAGCCCTGCC	NA	False	NA	NA	False	NA	NA	NA	80250060	80265553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
ENSMUSG00000057130.13_80250061_80265746_1	chr18	+	703	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	51	3324	-17	193	multi-exon	FALSE	canonical	3	2407	junction_2	310.116465577406	4758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCTGTGCTTACTGCG	NA	False	NA	13	True	AATAAA	-21	NA	80250060	80265746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
ENSMUSG00000057130.13_80250061_80265746_2	chr18	+	772	5	NIC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	-17	193	combination_of_known_splicesites	FALSE	canonical	3	288	junction_3	1074.60606154069	4685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCTGTGCTTACTGCG	NA	False	NA	13	True	AATAAA	-21	NA	80250060	80265746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_80250117_80250368_80250559_80253276_80253346_80261918_80262023_80265393
ENSMUSG00000057132.17_52397871_52434697_1	chr14	+	4497	26	NIC	ENSMUSG00000057132.17	novel	1733	4	NA	NA	1963	33694	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	1465	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACCCGGAAGTACCGACC	NA	False	NA	NA	False	NA	NA	NA	52397870	52434697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ENSMUSG00000057133.15_160867806_160950942_1	chr2	-	1421	10	ISM	ENSMUSG00000057133.15	ENSMUST00000138078.8	3092	17	53	17852	0	0	5prime_fragment	FALSE	canonical	3	41	junction_1	19.8997487421324	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGACGTGTATTTGAC	NA	False	NA	NA	False	CATAAA	-15	NA	160950942	160867805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
ENSMUSG00000057137.10_34850630_34854995_1	chr6	+	1471	4	NIC	ENSMUSG00000057137.10	novel	2614	2	NA	NA	981	3114	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGCGAGACGCGCACG	NA	False	NA	NA	False	NA	NA	NA	34850629	34854995	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_34851631_34852471_34852548_34853473_34853707_34854834
ENSMUSG00000057147.14_114348626_114485368_1	chr2	-	932	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	77	1725	0	0	multi-exon	FALSE	canonical	3	190	junction_3	18.9670767383907	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAATTTCAGTGAACTC	NA	False	NA	NA	False	AATATA	-20	NA	114485368	114348625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
ENSMUSG00000057176.5_127172755_127182472_1	chr7	-	1717	9	NIC	ENSMUSG00000057176.5	novel	2536	9	NA	NA	2422	8800	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACCGCGCAAGCGCACT	NA	False	NA	NA	False	NA	NA	NA	127182472	127172754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_127173139_127176706_127176819_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ENSMUSG00000057219.12_115381246_115382650_1	chr11	+	795	5	NNC	ENSMUSG00000057219.12	novel	2260	3	NA	NA	14466	1357	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGAAGATGCCAGACCCGG	NA	False	NA	NA	False	NA	NA	NA	115381245	115382650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_115381571_115381678_115381794_115381988_115382025_115382096_115382198_115382432
ENSMUSG00000057219.12_115381246_115382650_2	chr11	+	813	5	NNC	ENSMUSG00000057219.12	novel	2260	3	NA	NA	14466	1357	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGAAGATGCCAGACCCGG	NA	False	NA	NA	False	NA	NA	NA	115381245	115382650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_115381571_115381678_115381794_115381963_115382025_115382096_115382191_115382432
ENSMUSG00000057219.12_115381246_115382650_3	chr11	+	990	4	NIC	ENSMUSG00000057219.12	novel	2260	3	NA	NA	14466	1357	intron_retention	FALSE	non_canonical	0	0	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGAAGATGCCAGACCCGG	NA	False	NA	NA	False	NA	NA	NA	115381245	115382650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_115381571_115381678_115382025_115382096_115382198_115382432
ENSMUSG00000057229.12_25318839_25324976_1	chr7	+	1544	7	NNC	ENSMUSG00000057229.12	novel	1465	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	58.3457129720961	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGCCTTTCCTCCCA	1739	False	NA	39	True	NA	NA	NA	25318838	25324976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_25318886_25319510_25319590_25320320_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
ENSMUSG00000057230.15_86932084_86975211_1	chr6	+	3600	7	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-4011	607	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	9.97357620025145	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATACACCTCTACTGCC	NA	False	NA	-56	True	NA	NA	NA	86932083	86975211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86972821
ENSMUSG00000057230.15_86932208_86975211_1	chr6	+	3476	7	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-3887	607	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	9.97357620025145	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATACACCTCTACTGCC	NA	False	NA	-56	True	NA	NA	NA	86932207	86975211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86972821
ENSMUSG00000057234.10_108922645_109111047_1	chr2	-	1887	6	NIC	ENSMUSG00000057234.10	novel	2018	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	18.3891272223561	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-17	NA	109111047	108922644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733_109105021_109110953
ENSMUSG00000057236.11_129203177_129229100_1	chr4	-	945	5	NIC	ENSMUSG00000057236.11	novel	722	4	NA	NA	-58	133	combination_of_known_junctions	FALSE	canonical	3	143	junction_1	413.387454454051	6239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATAGATAAAAGAGAGCTT	2555	False	NA	NA	False	AATAAA	-17	NA	129229100	129203176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_129203670_129216594_129216663_129222380_129222527_129228289_129228438_129229010
ENSMUSG00000057236.11_129203310_129229042_1	chr4	-	382	2	NNC	ENSMUSG00000057236.11	novel	722	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	2613	False	NA	-29	True	AATAAA	-14	NA	129229042	129203309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_129203660_129229010
ENSMUSG00000057236.11_129203310_129229100_1	chr4	-	1784	13	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	-58	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	298.072173866219	6624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	2555	False	NA	-29	True	AATAAA	-14	NA	129229100	129203309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_129203674_129203816_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ENSMUSG00000057236.11_129203310_129229100_2	chr4	-	1787	13	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	298.072173866219	6127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	2555	False	NA	-29	True	AATAAA	-14	NA	129229100	129203309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_129203670_129203809_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ENSMUSG00000057236.11_129203310_129229100_3	chr4	-	450	2	NIC	ENSMUSG00000057236.11	novel	722	4	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	2555	False	NA	-29	True	AATAAA	-14	NA	129229100	129203309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_129203670_129229010
ENSMUSG00000057236.11_129203310_129229100_4	chr4	-	1646	12	NIC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	305.162062349697	4360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	2555	False	NA	-29	True	AATAAA	-14	NA	129229100	129203309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_129203670_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ENSMUSG00000057236.11_129203310_129229100_5	chr4	-	1770	13	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	295.245378174381	5097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	2555	False	NA	-29	True	AATAAA	-14	NA	129229100	129203309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_129203660_129203816_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ENSMUSG00000057236.11_129203310_129229100_6	chr4	-	1211	7	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	393.876743269882	2292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	2555	False	NA	-29	True	AATAAA	-14	NA	129229100	129203309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_129203670_129215855_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ENSMUSG00000057236.11_129203310_129229100_7	chr4	-	509	3	NNC	ENSMUSG00000057236.11	novel	722	4	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	520	1880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	2555	False	NA	-29	True	AATAAA	-14	NA	129229100	129203309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_129203670_129228378_129228438_129229010
ENSMUSG00000057236.11_129203310_129229100_8	chr4	-	812	5	NIC	ENSMUSG00000057236.11	novel	722	4	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_1	413.387454454051	5877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	2555	False	NA	-29	True	AATAAA	-14	NA	129229100	129203309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_129203670_129216594_129216663_129222380_129222527_129228289_129228438_129229010
ENSMUSG00000057236.11_129203310_129229163_1	chr4	-	503	2	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	2492	False	NA	-29	True	AATAAA	-14	NA	129229163	129203309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_129203660_129229010
ENSMUSG00000057236.11_129203450_129229100_1	chr4	-	672	5	NIC	ENSMUSG00000057236.11	novel	722	4	NA	NA	-58	-140	combination_of_known_junctions	FALSE	canonical	3	143	junction_1	413.387454454051	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTTTAGGGGTTAG	2555	False	NA	-14	True	ATTAAA	-17	NA	129229100	129203449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_129203670_129216594_129216663_129222380_129222527_129228289_129228438_129229010
ENSMUSG00000057278.9_86348524_86355840_1	chr6	+	347	4	FSM	ENSMUSG00000057278.9	ENSMUST00000089558.7	1055	4	238	470	0	0	multi-exon	FALSE	canonical	3	2623	junction_2	545.029866663796	7730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCATATGGAACTTTTT	NA	False	NA	-20	True	NA	NA	NA	86348523	86355840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_86348597_86352658_86352682_86353476_86353602_86355714
ENSMUSG00000057278.9_86348524_86355889_1	chr6	+	377	3	NNC	ENSMUSG00000057278.9	novel	746	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1909	21529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTTCTGCTGTTGTGGA	NA	False	NA	29	True	AATAAA	-20	NA	86348523	86355889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_86348601_86353476_86353602_86355714
ENSMUSG00000057278.9_86348524_86355889_2	chr6	+	396	4	FSM	ENSMUSG00000057278.9	ENSMUST00000089558.7	1055	4	238	421	0	0	multi-exon	FALSE	canonical	3	2623	junction_2	545.029866663796	31299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTTCTGCTGTTGTGGA	NA	False	NA	29	True	AATAAA	-20	NA	86348523	86355889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_86348597_86352658_86352682_86353476_86353602_86355714
ENSMUSG00000057286.7_116562495_116566624_1	chr11	-	849	6	NNC	ENSMUSG00000057286.7	novel	3643	9	NA	NA	3880	3634	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1263	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGATCGCGCTTGCGCG	NA	False	NA	NA	False	NA	NA	NA	116566624	116562494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_116562583_116562989_116563182_116563489_116563565_116564763_116564891_116565125_116565202_116566333
ENSMUSG00000057286.7_116562495_116566624_2	chr11	-	1164	5	NIC	ENSMUSG00000057286.7	novel	3643	9	NA	NA	3880	3634	intron_retention	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGATCGCGCTTGCGCG	NA	False	NA	NA	False	NA	NA	NA	116566624	116562494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_116562583_116562989_116563565_116564763_116564898_116565125_116565202_116566333
ENSMUSG00000057342.16_45359691_45367326_1	chr7	-	2648	7	FSM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	100	800	0	0	multi-exon	FALSE	canonical	3	70	junction_6	23.5141801189552	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGACATCCCTTTCAGTT	3262	False	NA	-6	True	AATAAA	-35	NA	45367326	45359690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
ENSMUSG00000057363.13_43789433_43866924_1	chr1	-	1264	14	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	-2	-761	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	56.3974694132017	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCCGCCAGAGTGAAGAA	NA	False	NA	NA	False	NA	NA	NA	43866924	43789432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844850_43866774
ENSMUSG00000057367.13_7818228_7837064_1	chr9	-	3082	7	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	57.8234861933761	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGATGTGATTCATGAGA	-26	True	NA	-1	True	AATAAA	-21	NA	7837064	7818227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_7818945_7819021_7819064_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
ENSMUSG00000057375.14_107171581_107217020_1	chr4	+	1395	11	NNC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	152.184887554579	979	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCTTCAGCTCTT	NA	False	NA	29	True	AGTAAA	-19	NA	107171580	107217020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107197527_107197622_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ENSMUSG00000057375.14_107178454_107217020_1	chr4	+	1071	8	NNC	ENSMUSG00000057375.14	novel	524	3	NA	NA	2286	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	124.64774857369	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCTTCAGCTCTT	11	True	NA	29	True	AGTAAA	-19	NA	107178453	107217020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_107178547_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ENSMUSG00000057388.10_13130236_13135000_1	chr17	-	987	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	232	0	-10	0	multi-exon	FALSE	canonical	3	996	junction_2	30.9120616516523	4649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTTACTGTGTTGTG	NA	False	NA	-9	True	ATTAAA	-18	NA	13135000	13130235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
ENSMUSG00000057388.10_13130367_13135000_1	chr17	-	856	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	232	131	-10	-131	multi-exon	FALSE	canonical	3	996	junction_2	30.9120616516523	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTGTGTGCTTGTGTG	NA	False	NA	0	True	TTTAAA	-16	NA	13135000	13130366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
ENSMUSG00000057409.8_21709260_21727815_1	chr17	+	792	5	NNC	ENSMUSG00000057409.8	novel	3065	5	NA	NA	0	-2211	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	24.0572234474388	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTGTCTGAACAGTAAT	1475	False	NA	NA	False	AATAAA	-16	NA	21709259	21727815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21727601
ENSMUSG00000057409.8_21709260_21730059_1	chr17	+	2389	5	FSM	ENSMUSG00000057409.8	ENSMUST00000233158.2	3065	5	0	676	0	33	multi-exon	FALSE	canonical	3	42	junction_4	50.8527285403645	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTAATTATAACTGTGG	1475	False	NA	NA	False	AATAAA	-20	NA	21709259	21730059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21728248
ENSMUSG00000057411.10_26009480_26011347_1	chr17	-	1352	3	FSM	ENSMUSG00000057411.10	ENSMUST00000236842.2	1886	3	528	6	0	0	multi-exon	FALSE	canonical	3	227	junction_2	3.5	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTGTTTGTTCC	8392	False	NA	-7	True	AATAAA	-17	NA	26011347	26009479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26009753_26009906_26009958_26010319
ENSMUSG00000057440.9_7348111_7626877_1	chr18	-	4840	17	FSM	ENSMUSG00000057440.9	ENSMUST00000115869.4	4981	17	-11	152	-11	-147	multi-exon	FALSE	canonical	3	19	junction_16	22.8061635035356	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTTGAAAGTTGTTT	-33	True	NA	NA	False	AATAAA	-17	NA	7626877	7348110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626732
ENSMUSG00000057497.9_86342628_86344007_1	chr6	+	590	2	ISM	ENSMUSG00000057497.9	ENSMUST00000204893.2	448	3	-78	1773	0	6	5prime_fragment	FALSE	canonical	3	1864	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTTAAAATGTATATTAA	8617	False	NA	8	True	TATAAA	-2	NA	86342627	86344007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_86342802_86343591
ENSMUSG00000057497.9_86342706_86347040_1	chr6	+	1537	4	NNC	ENSMUSG00000057497.9	novel	1643	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	850.977999454484	3614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTCTTATGGGTAGTG	8695	False	NA	32	True	AATAAA	-16	NA	86342705	86347040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_86342802_86343591_86343733_86345712_86346150_86346177
ENSMUSG00000057522.16_95304906_95383840_1	chr11	+	2489	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	0	392	0	-392	multi-exon	FALSE	canonical	3	59	junction_1	65.0422170593838	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGGTATCTCTGGTCT	NA	False	NA	5	True	TATAAA	-17	NA	95304905	95383840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ENSMUSG00000057551.11_19533398_19559637_1	chr9	+	2569	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	124	junction_2	34.0665614972351	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCAGCTCTTTATTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	19533397	19559637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ENSMUSG00000057551.11_19533398_19561027_1	chr9	+	3959	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_2	34.0665614972351	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533397	19561027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ENSMUSG00000057554.14_12454298_12476376_1	chr13	-	2549	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099821.10	2792	10	243	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	18.5718491337539	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATACTCTCTGGAATA	NA	False	NA	-13	True	ATTAAA	-18	NA	12476376	12454297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476307
ENSMUSG00000057561.11_46730792_46742245_1	chr18	+	1811	3	FSM	ENSMUSG00000057561.11	ENSMUST00000078079.11	2865	3	21	1033	0	0	multi-exon	FALSE	canonical	3	1498	junction_1	106	2749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCTTTTTAATATGTT	NA	False	NA	17	True	AATAAA	-18	NA	46730791	46742245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_46730868_46731707_46731768_46740570
ENSMUSG00000057572.16_129229488_129240826_1	chr4	+	995	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	0	2838	0	0	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	2710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGTAGCAGTGGTCT	NA	False	NA	17	True	TTTAAA	-24	NA	129229487	129240826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ENSMUSG00000057572.16_129229805_129240879_1	chr4	+	731	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	317	2785	0	53	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	2334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTACTTGGTCATTTG	NA	False	NA	70	True	AATGAA	-22	NA	129229804	129240879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ENSMUSG00000057572.16_129229840_129240826_1	chr4	+	643	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	352	2838	0	0	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGTAGCAGTGGTCT	NA	False	NA	17	True	TTTAAA	-24	NA	129229839	129240826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ENSMUSG00000057594.13_120355692_120358307_1	chr11	-	1526	4	FSM	ENSMUSG00000057594.13	ENSMUST00000150688.2	429	4	-48	-1049	0	0	multi-exon	FALSE	canonical	0	0	junction_3	81.6999932000541	487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTGGCCTGGAGAGA	NA	False	NA	NA	False	CATAAA	-26	NA	120358307	120355691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120356926_120357479_120357594_120358007_120358067_120358188
ENSMUSG00000057649.7_74085957_74108936_1	chr13	+	2389	16	NIC	ENSMUSG00000057649.7	novel	2407	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	34.8873743478768	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGTACCTGTTTGTA	NA	False	NA	19	True	TATAAA	-26	NA	74085956	74108936	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090749_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ENSMUSG00000057666.19_125138678_125142572_1	chr6	-	1395	7	FSM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	164	-139	-4	0	multi-exon	FALSE	canonical	3	6089	junction_1	1931.60920967179	293918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTCCCAGCCCAGGG	NA	False	NA	NA	False	NA	NA	NA	125142572	125138677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
ENSMUSG00000057666.19_125138817_125141886_1	chr6	-	1228	6	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	832	junction_5	4068.19726168729	18435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125141886	125138816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125141815
ENSMUSG00000057666.19_125138817_125142572_1	chr6	-	1438	5	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	6089	junction_1	2170.40737823571	4081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125142572	125138816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_125139065_125139174_125139672_125139805_125140400_125142233_125142275_125142514
ENSMUSG00000057666.19_125138817_125142572_2	chr6	-	1474	5	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	6089	junction_1	1441.13000367767	4426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125142572	125138816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_125139065_125139174_125140004_125140101_125140400_125142233_125142275_125142514
ENSMUSG00000057666.19_125138817_125142572_3	chr6	-	1354	6	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	6089	junction_1	2115.89069660982	180409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125142572	125138816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140400_125142233_125142275_125142514
ENSMUSG00000057666.19_125138817_125142572_4	chr6	-	1390	6	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	6089	junction_1	1692.66445582106	34007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125142572	125138816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_125139065_125139174_125139357_125139440_125140004_125140101_125140400_125142233_125142275_125142514
ENSMUSG00000057666.19_125138817_125142572_5	chr6	-	1340	6	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	6089	junction_1	1950.20942465162	225039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125142572	125138816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_125139065_125139174_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
ENSMUSG00000057666.19_125138817_125142572_6	chr6	-	3090	6	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	6089	junction_1	2110.23520963896	13795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125142572	125138816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125142275_125142514
ENSMUSG00000057666.19_125138817_125142572_7	chr6	-	335	3	NNC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3044.5	4223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125142572	125138816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_125139065_125139174_125139216_125142526
ENSMUSG00000057738.15_29911266_29921457_1	chr2	+	2120	14	ISM	ENSMUSG00000057738.15	ENSMUST00000100225.9	7892	57	55574	0	-567	0	3prime_fragment	TRUE	canonical	3	402	junction_2	46.684513352741	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAAGGCTTTGCTCCTCT	7683	False	NA	15	True	AATAAA	-15	NA	29911265	29921457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ENSMUSG00000057788.14_70746101_70755121_1	chr8	-	1534	13	FSM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	18	585	-8	135	multi-exon	FALSE	canonical	3	250	junction_9	19.6148682268211	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGACTTGAGAATGGGGT	9949	False	NA	-5	True	AGTAAA	-19	NA	70755121	70746100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
ENSMUSG00000057788.14_70746101_70755121_2	chr8	-	1463	13	NNC	ENSMUSG00000057788.14	novel	2137	13	NA	NA	-8	135	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	79.9827672411724	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGACTTGAGAATGGGGT	9949	False	NA	-5	True	AGTAAA	-19	NA	70755121	70746100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753682_70754972
ENSMUSG00000057788.14_70746101_70755121_3	chr8	-	908	9	NNC	ENSMUSG00000057788.14	novel	2137	13	NA	NA	-8	135	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	98.5275976566972	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGACTTGAGAATGGGGT	9949	False	NA	-5	True	AGTAAA	-19	NA	70755121	70746100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749600_70754984
ENSMUSG00000057788.14_70746101_70755121_4	chr8	-	1410	12	NIC	ENSMUSG00000057788.14	novel	2137	13	NA	NA	-8	135	combination_of_known_splicesites	FALSE	canonical	2	3	junction_11	83.7461729728786	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGACTTGAGAATGGGGT	9949	False	NA	-5	True	AGTAAA	-19	NA	70755121	70746100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70754972
ENSMUSG00000057788.14_70746101_70755121_5	chr8	-	1527	13	NNC	ENSMUSG00000057788.14	novel	2137	13	NA	NA	-8	135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.4802857157509	1250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGACTTGAGAATGGGGT	9949	False	NA	-5	True	AGTAAA	-19	NA	70755121	70746100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_70746331_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
ENSMUSG00000057788.14_70746236_70755121_1	chr8	-	1399	13	FSM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	18	720	-8	0	multi-exon	FALSE	canonical	3	250	junction_9	19.6148682268211	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGAGCACTGTCCGACG	9949	False	NA	NA	False	NA	NA	NA	70755121	70746235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
ENSMUSG00000057789.15_27238784_27247552_1	chr17	-	1956	6	FSM	ENSMUSG00000057789.15	ENSMUST00000078691.12	2387	6	431	0	0	0	multi-exon	TRUE	canonical	3	126	junction_3	5.45527267879434	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGCCTGGCATCTTTACA	NA	False	NA	0	True	AATAAA	-20	NA	27247552	27238783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27240010_27240140_27240322_27241412_27241557_27241715_27241852_27244766_27244868_27247384
ENSMUSG00000057789.15_27239365_27247552_1	chr17	-	1375	6	FSM	ENSMUSG00000057789.15	ENSMUST00000078691.12	2387	6	431	581	0	275	multi-exon	FALSE	canonical	3	126	junction_3	5.45527267879434	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCACACCCCCTCCCCT	NA	False	NA	NA	False	NA	NA	NA	27247552	27239364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27240010_27240140_27240322_27241412_27241557_27241715_27241852_27244766_27244868_27247384
ENSMUSG00000057789.15_27239640_27247552_1	chr17	-	1100	6	FSM	ENSMUSG00000057789.15	ENSMUST00000078691.12	2387	6	431	856	0	0	multi-exon	FALSE	canonical	3	126	junction_3	5.45527267879434	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCACTAATTCCCAGAAAA	NA	False	NA	NA	False	NA	NA	NA	27247552	27239639	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27240010_27240140_27240322_27241412_27241557_27241715_27241852_27244766_27244868_27247384
ENSMUSG00000057835.8_56171892_56185638_1	chr17	-	2172	4	NNC	ENSMUSG00000057835.8	novel	2018	4	NA	NA	292	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	9.67241208569794	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCATTCTCTTGGATAGC	NA	False	NA	NA	False	AATAAA	-16	NA	56185638	56171891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_56173651_56175302_56175364_56175558_56175686_56185413
ENSMUSG00000057836.13_72117949_72140623_1	chrX	-	1584	10	Fusion	ENSMUSG00000057836.13_ENSMUSG00000079845.9	novel	1584	9	NA	NA	0	2	multi-exon	TRUE	non_canonical	0	0	junction_1	589.847019296393	3460	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72140623	72117948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chrX_-_72118054_72130003_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138551_72138689_72140586
ENSMUSG00000057836.13_72130567_72140623_1	chrX	-	901	9	FSM	ENSMUSG00000057836.13	ENSMUST00000074619.6	1645	9	78	666	0	-270	multi-exon	FALSE	canonical	3	586	junction_7	340.598531081683	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGTGCAAATATGTCTG	NA	False	NA	-4	True	AATAAA	-18	NA	72140623	72130566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
ENSMUSG00000057841.6_115782601_115785708_1	chr6	-	382	4	FSM	ENSMUSG00000057841.6	ENSMUST00000081840.6	517	4	0	135	0	-128	multi-exon	FALSE	canonical	3	14202	junction_3	1766.83093575915	3783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATTGTAGAAAGAGCAGC	NA	False	NA	-103	True	NA	NA	NA	115785708	115782600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_115782650_115783946_115784129_115784762_115784864_115785658
ENSMUSG00000057858.9_60187331_60215133_1	chr19	-	1726	8	FSM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	-4	313	0	0	multi-exon	FALSE	canonical	3	51	junction_7	81.0915330641484	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTGTGTGTGTGT	9769	False	NA	NA	False	AGTAAA	-14	NA	60215133	60187330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
ENSMUSG00000057858.9_60187331_60215133_2	chr19	-	1648	8	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	98	junction_7	67.6669515090684	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTGTGTGTGTGT	9769	False	NA	NA	False	AGTAAA	-14	NA	60215133	60187330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214741
ENSMUSG00000057858.9_60187331_60215133_3	chr19	-	1314	8	FSM	ENSMUSG00000057858.9	ENSMUST00000238054.2	951	8	-15	-348	0	0	multi-exon	FALSE	canonical	3	34	junction_7	86.2054972440971	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTGTGTGTGTGT	9769	False	NA	NA	False	AGTAAA	-14	NA	60215133	60187330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60215075
ENSMUSG00000057863.7_56920416_56921246_1	chr17	+	523	3	NIC	ENSMUSG00000057863.7	novel	383	4	NA	NA	0	3	intron_retention	FALSE	canonical	3	9970	junction_2	629.5	178005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTATGTGTGAGCT	NA	False	NA	2	True	AATAAA	-15	NA	56920415	56921246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_56920681_56920906_56921042_56921123
ENSMUSG00000057933.11_78238300_78249898_1	chr9	-	930	7	NIC	ENSMUSG00000057933.11	novel	870	7	NA	NA	-3864	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	12.0369800568452	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTCATAAGTTCTA	NA	False	NA	1	True	AATAAA	-17	NA	78249898	78238299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78249111_78249221_78249768
ENSMUSG00000057933.11_78238300_78250021_1	chr9	-	1053	7	NIC	ENSMUSG00000057933.11	novel	870	7	NA	NA	-3987	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	12.0369800568452	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTCATAAGTTCTA	NA	False	NA	1	True	AATAAA	-17	NA	78250021	78238299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78249111_78249221_78249768
ENSMUSG00000057982.9_22137048_22150989_1	chr9	+	1563	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	0	-250	0	0	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCCTGGCCGGCCATGC	778	False	NA	34	True	NA	NA	NA	22137047	22150989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ENSMUSG00000057982.9_22137048_22152165_2	chr9	+	2739	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	0	-1426	0	774	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTGTTCAGTCCAATT	778	False	NA	NA	False	NA	NA	NA	22137047	22152165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ENSMUSG00000058013.12_93241297_93320633_1	chr5	+	2843	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	1	2184	0	-2184	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGACCCCAGCCAAGTT	NA	False	NA	NA	False	AAAACA	-17	NA	93241296	93320633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ENSMUSG00000058013.12_93241297_93321100_1	chr5	+	3310	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	1	1717	0	-1717	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGACTTTTTTGATGCCA	NA	False	NA	NA	False	TTTAAA	-45	NA	93241296	93321100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ENSMUSG00000058022.15_41918034_42001092_1	chr13	-	1109	7	FSM	ENSMUSG00000058022.15	ENSMUST00000121404.8	1602	7	68	425	0	0	multi-exon	FALSE	canonical	3	17	junction_6	3.97562014729219	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGACATCTCCTGTTACT	NA	False	NA	-3	True	AATAAA	-45	NA	42001092	41918033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_41918269_41920811_41920964_41930983_41931100_41967690_41967793_41969613_41969749_41981618_41981862_42000966
ENSMUSG00000058076.13_170956733_170978172_1	chr1	-	1251	6	NIC	ENSMUSG00000058076.13	novel	3171	6	NA	NA	0	243	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	366.673369635702	3653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTCTTTGGAATCT	456	False	NA	-6	True	ATTAAA	-16	NA	170978172	170956732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324_170973382_170978048
ENSMUSG00000058076.13_170956733_170978172_2	chr1	-	1172	6	FSM	ENSMUSG00000058076.13	ENSMUST00000111336.10	3171	6	0	1999	0	243	multi-exon	TRUE	canonical	3	578	junction_5	147.434866975217	3636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTCTTTGGAATCT	456	False	NA	-6	True	ATTAAA	-16	NA	170978172	170956732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324_170973382_170978127
ENSMUSG00000058076.13_170956733_170978172_3	chr1	-	1008	5	NIC	ENSMUSG00000058076.13	novel	3171	6	NA	NA	0	243	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	373.85324660888	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTCTTTGGAATCT	456	False	NA	-6	True	ATTAAA	-16	NA	170978172	170956732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_170957475_170966262_170966325_170971126_170971229_170973324_170973382_170978127
ENSMUSG00000058135.13_107919577_107925134_1	chr3	-	1128	8	FSM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	155	6	-12	0	multi-exon	FALSE	canonical	3	592	junction_3	56.1666616201374	2654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCATGAGTTGTGTCT	6738	False	NA	-10	True	AATAAA	-12	NA	107925134	107919576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
ENSMUSG00000058135.13_107919707_107925134_1	chr3	-	998	8	FSM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	155	136	-12	0	multi-exon	FALSE	canonical	3	592	junction_3	56.1666616201374	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGATGGTCAACACTATCTT	6738	False	NA	NA	False	NA	NA	NA	107925134	107919706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
ENSMUSG00000058147.2_72277685_72308997_1	chrX	-	1584	10	Fusion	ENSMUSG00000031362.18_ENSMUSG00000058147.2	novel	1584	9	NA	NA	-1	0	multi-exon	TRUE	canonical	0	0	junction_1	515.324517197359	3360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72308997	72277684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chrX_-_72277787_72298248_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ENSMUSG00000058147.2_72298146_72308997_1	chrX	-	1578	9	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	468.995852193812	2284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-8	True	AATAAA	-16	NA	72308997	72298145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306092_72306921_72307059_72308956
ENSMUSG00000058147.2_72298146_72308997_2	chrX	-	2400	8	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	686	junction_4	393.293938993445	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-8	True	AATAAA	-16	NA	72308997	72298145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ENSMUSG00000058147.2_72298812_72308997_1	chrX	-	919	9	FSM	ENSMUSG00000058147.2	ENSMUST00000080839.2	1584	9	-1	666	-1	-666	multi-exon	FALSE	canonical	3	686	junction_5	383.166718772651	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGTGCAAATATGTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	72308997	72298811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ENSMUSG00000058174.8_37768889_37776879_1	chr3	-	584	2	NNC	ENSMUSG00000058174.8	novel	1098	2	NA	NA	1599	-414	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	134342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGGCGCCACGGGCCC	NA	False	NA	NA	False	NA	NA	NA	37776879	37768888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_37769397_37776803
ENSMUSG00000058186.14_145311764_145434487_1	chr4	+	1362	8	Fusion	ENSMUSG00000078502.11_ENSMUSG00000058186.14	novel	1938	3	NA	NA	-9	3476	multi-exon	FALSE	canonical	0	0	junction_7	152.773274722341	847	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	145311763	145434487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_145312083_145314001_145314095_145319501_145319572_145399301_145399395_145406465_145406546_145422720_145422806_145425813_145425941_145433992
ENSMUSG00000058186.14_145311764_145434487_2	chr4	+	1282	7	Fusion	ENSMUSG00000078502.11_ENSMUSG00000058186.14	novel	1938	3	NA	NA	-9	3476	multi-exon	FALSE	canonical	0	0	junction_6	158.820303767777	739	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	145311763	145434487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_145312083_145314001_145314095_145319501_145319572_145399301_145399395_145422720_145422806_145425813_145425941_145433992
ENSMUSG00000058186.14_145397255_145427583_1	chr4	+	578	5	FSM	ENSMUSG00000058186.14	ENSMUST00000105738.9	4006	5	0	3428	0	-1627	multi-exon	FALSE	canonical	3	18	junction_2	173.168992605489	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTTAGAAATGTGATCC	NA	False	NA	NA	False	NA	NA	NA	145397254	145427583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_145397419_145399301_145399395_145422720_145422806_145425813_145425941_145427474
ENSMUSG00000058186.14_145397255_145431011_1	chr4	+	3922	6	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	187.01080182706	3465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	145397254	145431011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_145397419_145399301_145399395_145422720_145422806_145425813_145425941_145427474_145429340_145429423
ENSMUSG00000058192.17_20492821_20506490_1	chr9	+	2559	6	FSM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	200	10215	0	0	multi-exon	FALSE	canonical	3	29	junction_1	3.8262252939418	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTGAGTTTCATGATAT	42	False	NA	25	True	ATTAAA	-25	NA	20492820	20506490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634_20502718_20504456
ENSMUSG00000058216.14_4107477_4109087_1	chr19	-	895	5	ISM	ENSMUSG00000058216.14	ENSMUST00000076451.7	685	6	208	-1	208	0	3prime_fragment	FALSE	canonical	3	57	junction_3	9.36416040016402	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGCAGGGCTTGTCCT	9432	False	NA	NA	False	NA	NA	NA	4109087	4107476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_4107719_4107887_4107996_4108085_4108190_4108528_4108617_4108734
ENSMUSG00000058216.14_4107477_4109461_1	chr19	-	779	6	NNC	ENSMUSG00000058216.14	novel	708	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	27.2205804493585	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGCAGGGCTTGTCCT	9058	False	NA	NA	False	NA	NA	NA	4109461	4107476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_4107719_4107887_4107996_4108085_4108190_4108528_4108617_4108734_4108842_4109331
ENSMUSG00000058216.14_4107477_4109461_3	chr19	-	687	6	NIC	ENSMUSG00000058216.14	novel	708	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	25.7029181222678	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGCAGGGCTTGTCCT	9058	False	NA	NA	False	NA	NA	NA	4109461	4107476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_4107719_4107887_4107996_4108085_4108190_4108528_4108617_4108734_4108842_4109423
ENSMUSG00000058239.14_30645421_30646297_1	chr7	-	796	2	ISM	ENSMUSG00000058239.14	ENSMUST00000170442.8	886	8	9367	-578	8578	578	3prime_fragment	FALSE	canonical	3	138	junction_1	0	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTGTGTCCATG	3855	False	NA	-8	True	AATAAA	-22	NA	30646297	30645420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_30646095_30646175
ENSMUSG00000058240.15_91486210_91525511_1	chr16	-	1613	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	352	0	0	0	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	3364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTCTGAATTTCTCCGA	9180	False	NA	NA	False	TTTAAA	-18	NA	91525511	91486209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000058240.15_91486414_91525511_1	chr16	-	1403	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	505.745132343247	1028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGCTTTCAGCAAAAG	9180	False	NA	-22	True	TATAAA	-16	NA	91525511	91486413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514297_91514364_91525445
ENSMUSG00000058240.15_91486414_91525511_3	chr16	-	1493	14	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	31	junction_4	579.281844719219	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGCTTTCAGCAAAAG	9180	False	NA	-22	True	TATAAA	-16	NA	91525511	91486413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000058240.15_91486494_91525511_1	chr16	-	1330	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	451.651844775253	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGGGGACATTCCAAAA	9180	False	NA	-24	True	NA	NA	NA	91525511	91486493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91486804_91487591_91487626_91489473_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000058240.15_91486494_91525511_2	chr16	-	1323	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	505.745132343247	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGGGGACATTCCAAAA	9180	False	NA	-24	True	NA	NA	NA	91525511	91486493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514297_91514364_91525445
ENSMUSG00000058240.15_91491346_91525511_1	chr16	-	956	10	FSM	ENSMUSG00000058240.15	ENSMUST00000114023.3	1154	10	78	120	0	-114	multi-exon	FALSE	canonical	3	81	junction_1	469.417790170329	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCTAGAGTACATTTT	9180	False	NA	2	True	AATAAA	-25	NA	91525511	91491345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91491554_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000058240.15_91491346_91525511_2	chr16	-	1551	9	ISM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	352	5136	0	-114	5prime_fragment	FALSE	canonical	3	1431	junction_2	88.070195724774	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCTAGAGTACATTTT	9180	False	NA	2	True	AATAAA	-25	NA	91525511	91491345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000058240.15_91500328_91525496_1	chr16	-	563	7	NNC	ENSMUSG00000058240.15	novel	762	6	NA	NA	0	3403	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	570.565630658638	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGACAATGTCTTTTTCTC	9195	False	NA	NA	False	NA	NA	NA	91525496	91500327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_91500503_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000058240.15_91503907_91525511_1	chr16	-	609	6	FSM	ENSMUSG00000058240.15	ENSMUST00000141664.9	762	6	-23	176	0	-176	multi-exon	FALSE	canonical	3	1466	junction_2	55.2268050859363	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTGTGTACTCG	9180	False	NA	NA	False	TATAAA	-19	NA	91525511	91503906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000058258.15_8935674_8942487_1	chr13	+	2890	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	137	0	137	0	multi-exon	FALSE	canonical	3	487	junction_1	56.3576747213722	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAGGTAAAATACTTGT	NA	False	NA	75	True	TATAAA	-6	NA	8935673	8942487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
ENSMUSG00000058258.15_8935979_8940680_1	chr13	+	778	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	442	1807	0	44	multi-exon	FALSE	canonical	3	487	junction_1	56.3576747213722	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGAAAAATTTTCTAC	NA	False	NA	NA	False	AATACA	-20	NA	8935978	8940680	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
ENSMUSG00000058258.15_8935979_8942487_1	chr13	+	2585	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	442	0	0	0	multi-exon	FALSE	canonical	3	487	junction_1	56.3576747213722	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAGGTAAAATACTTGT	NA	False	NA	75	True	TATAAA	-6	NA	8935978	8942487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
ENSMUSG00000058267.14_160022785_160027390_1	chr1	+	649	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	0	2350	0	0	multi-exon	FALSE	canonical	3	2655	junction_1	51	7643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGTCTTTCCTTCAAGT	NA	False	NA	17	True	AATAAA	-17	NA	160022784	160027390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160022882_160024515_160024675_160026997
ENSMUSG00000058298.11_53473201_53484155_1	chr10	-	882	4	NIC	ENSMUSG00000058298.11	novel	3513	7	NA	NA	4893	10953	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGGCGCGGCGCGGCCC	NA	False	NA	NA	False	NA	NA	NA	53484155	53473200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_53473395_53478443_53478560_53482204_53482382_53483760
ENSMUSG00000058298.11_53473351_53484155_1	chr10	-	732	4	NIC	ENSMUSG00000058298.11	novel	3513	7	NA	NA	4893	10803	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGGGTTGTAGAAAGGCGA	NA	False	NA	NA	False	NA	NA	NA	53484155	53473350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_53473395_53478443_53478560_53482204_53482382_53483760
ENSMUSG00000058298.11_53478444_53484268_1	chr10	-	801	3	NIC	ENSMUSG00000058298.11	novel	2421	8	NA	NA	4780	5710	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAGGGTAAAAGAACGAAAA	NA	False	NA	NA	False	NA	NA	NA	53484268	53478443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_53478560_53482204_53482382_53483760
ENSMUSG00000058328.14_72151712_72161308_1	chrX	-	1102	9	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	0	303	combination_of_known_junctions	FALSE	canonical	3	112	junction_8	115.823141038395	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161308	72151711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161284
ENSMUSG00000058328.14_72151712_72161308_2	chrX	-	1179	9	FSM	ENSMUSG00000058328.14	ENSMUST00000078574.12	1650	9	0	471	0	303	multi-exon	FALSE	canonical	3	269	junction_2	77.2438306598009	1299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161308	72151711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
ENSMUSG00000058328.14_72151712_72161308_3	chrX	-	1080	8	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	0	303	combination_of_known_junctions	FALSE	canonical	3	293	junction_4	76.0110088696878	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161308	72151711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
ENSMUSG00000058328.14_72151712_72161308_4	chrX	-	1187	9	NNC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	0	303	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_8	130.918629308437	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161308	72151711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161199
ENSMUSG00000058328.14_72151712_72161308_5	chrX	-	1003	8	FSM	ENSMUSG00000058328.14	ENSMUST00000114521.8	1474	8	0	471	0	303	multi-exon	FALSE	canonical	3	112	junction_7	121.461844180947	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161308	72151711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161284
ENSMUSG00000058351.12_30846462_30850870_1	chr14	-	610	2	FSM	ENSMUSG00000058351.12	ENSMUST00000090205.5	426	2	-10	-174	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATTTCAGCCATTTT	NA	False	NA	-11	True	AATAAA	-18	NA	30850870	30846461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_30846791_30850589
ENSMUSG00000058355.9_80410274_80438299_1	chr8	-	3540	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	70	183	0	-183	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80438299	80410273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ENSMUSG00000058355.9_80410274_80438299_2	chr8	-	2777	12	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	0	-183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	385.382561889176	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80438299	80410273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80426021_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ENSMUSG00000058355.9_80410916_80438299_1	chr8	-	2898	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	70	825	0	-825	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGATACAGTCTTTATAGTT	NA	False	NA	NA	False	NA	NA	NA	80438299	80410915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ENSMUSG00000058355.9_80411661_80438299_1	chr8	-	2153	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	70	1570	0	1174	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAGACATTTCAGATTA	NA	False	NA	-6	True	ATTAAA	-22	NA	80438299	80411660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ENSMUSG00000058392.14_32255384_32279579_1	chr17	+	2246	15	NIC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	32	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	174.748332157525	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGCTTTTTAATTACTT	NA	False	NA	15	True	TATAAA	-15	NA	32255383	32279579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_32255579_32264902_32264986_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ENSMUSG00000058392.14_32255384_32279579_2	chr17	+	2304	16	FSM	ENSMUSG00000058392.14	ENSMUST00000081339.13	4874	16	310	2260	0	32	multi-exon	FALSE	canonical	3	488	junction_12	76.5992747282172	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGCTTTTTAATTACTT	NA	False	NA	15	True	TATAAA	-15	NA	32255383	32279579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ENSMUSG00000058392.14_32255384_32280837_2	chr17	+	3562	16	FSM	ENSMUSG00000058392.14	ENSMUST00000081339.13	4874	16	310	1002	0	-993	multi-exon	FALSE	canonical	3	488	junction_12	76.5992747282172	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCGGAAGGAACCAAGTG	NA	False	NA	NA	False	NA	NA	NA	32255383	32280837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ENSMUSG00000058392.14_32255384_32280837_3	chr17	+	3553	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	-993	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	181.227236431199	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCGGAAGGAACCAAGTG	NA	False	NA	NA	False	NA	NA	NA	32255383	32280837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272940_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ENSMUSG00000058392.14_32255384_32281830_1	chr17	+	4555	16	FSM	ENSMUSG00000058392.14	ENSMUST00000081339.13	4874	16	310	9	0	0	multi-exon	FALSE	canonical	3	488	junction_12	76.5992747282172	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCGGATTGGTCTTTGA	NA	False	NA	13	True	ATTAAA	-15	NA	32255383	32281830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ENSMUSG00000058402.15_29559404_29575727_1	chr7	+	2334	4	FSM	ENSMUSG00000058402.15	ENSMUST00000074876.13	2537	4	0	203	0	-203	multi-exon	FALSE	canonical	3	31	junction_2	4.02768199119819	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGTTGCTGTGATATAGAA	NA	False	NA	NA	False	ATTAAA	-14	NA	29559403	29575727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_29559519_29560440_29560494_29572316_29572359_29573603
ENSMUSG00000058407.13_38026190_38036305_1	chr1	-	1315	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195247.6	1699	5	669	-285	0	285	multi-exon	FALSE	canonical	3	195	junction_4	302.235318088406	1996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGGAACTCCATTGGCT	NA	False	NA	-7	True	ATTAAA	-18	NA	38036305	38026189	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036244
ENSMUSG00000058407.13_38026477_38036305_1	chr1	-	1076	5	NNC	ENSMUSG00000058407.13	novel	3381	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	382.395737423941	2513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCACATGTCTGTTTTT	NA	False	NA	-5	True	NA	NA	NA	38036305	38026476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034916_38036189
ENSMUSG00000058407.13_38026477_38036305_2	chr1	-	1077	5	NNC	ENSMUSG00000058407.13	novel	3381	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	382.395737423941	2889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCACATGTCTGTTTTT	NA	False	NA	-5	True	NA	NA	NA	38036305	38026476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036195
ENSMUSG00000058407.13_38026477_38036305_3	chr1	-	1028	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195247.6	1699	5	669	2	0	0	multi-exon	FALSE	canonical	3	195	junction_4	302.235318088406	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCACATGTCTGTTTTT	NA	False	NA	-5	True	NA	NA	NA	38036305	38026476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036244
ENSMUSG00000058407.13_38026724_38036305_1	chr1	-	781	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195247.6	1699	5	669	249	0	0	multi-exon	FALSE	canonical	3	195	junction_4	302.235318088406	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCGTCTGTCTGTCTGT	NA	False	NA	NA	False	TTTAAA	-2	NA	38036305	38026723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036244
ENSMUSG00000058407.13_38028207_38036305_1	chr1	-	1721	4	FSM	ENSMUSG00000058407.13	ENSMUST00000193832.6	3472	4	19	1732	0	1132	multi-exon	FALSE	canonical	3	195	junction_3	348.930747665875	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGTGGCACCATAGATC	NA	False	NA	NA	False	ATTAAA	-13	NA	38036305	38028206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036244
ENSMUSG00000058407.13_38028207_38036305_2	chr1	-	1776	4	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	91	3937	0	1132	5prime_fragment	FALSE	canonical	3	765	junction_3	81.3183046224321	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGTGGCACCATAGATC	NA	False	NA	NA	False	ATTAAA	-13	NA	38036305	38028206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036189
ENSMUSG00000058440.15_30048030_30140903_1	chr6	+	2324	13	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	163.040383545509	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTGTCTCTGTGTAAT	15	True	NA	NA	False	NA	NA	NA	30048029	30140903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
ENSMUSG00000058440.15_30048030_30140903_2	chr6	+	2288	12	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	271	junction_11	90.9985923058862	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTGTCTCTGTGTAAT	15	True	NA	NA	False	NA	NA	NA	30048029	30140903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
ENSMUSG00000058440.15_30048030_30144859_1	chr6	+	1915	13	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	175.389309030574	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGGTTTGGGCTTTGG	15	True	NA	7	True	AATAAA	-23	NA	30048029	30144859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
ENSMUSG00000058440.15_30048030_30153179_1	chr6	+	3302	13	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	176.881080578638	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTATGTTCTTTTCT	15	True	NA	69	True	TATAAA	-12	NA	30048029	30153179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ENSMUSG00000058444.9_63071050_63104643_1	chr9	-	520	3	ISM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	180541	0	105782	0	3prime_fragment	FALSE	canonical	3	88	junction_1	8.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	4680	False	NA	-1	True	AATAAA	-18	NA	63104643	63071049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_63071473_63101483_63101530_63104592
ENSMUSG00000058444.9_63071050_63284943_1	chr9	-	2069	22	FSM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	241	0	216	0	multi-exon	FALSE	canonical	3	66	junction_19	9.60607328677695	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	False	NA	-1	True	AATAAA	-18	NA	63284943	63071049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ENSMUSG00000058444.9_63071050_63284943_2	chr9	-	2001	21	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	216	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_19	18.5973116336744	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	False	NA	-1	True	AATAAA	-18	NA	63284943	63071049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63279018_63279068_63284404
ENSMUSG00000058446.15_54801777_54866719_1	chr6	+	1676	5	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	7344	-3766	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	273.671792481432	395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTAATGGTTAAGAATAC	NA	False	NA	14	True	AATAAA	-16	NA	54801776	54866719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_54801890_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ENSMUSG00000058454.16_143383971_143402147_1	chr7	+	2516	9	NIC	ENSMUSG00000058454.16	novel	2752	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	171.596137412822	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTTGTACTGTCTCCT	NA	False	NA	32	True	NA	NA	NA	143383970	143402147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_143384003_143387504_143387674_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ENSMUSG00000058454.16_143383971_143402147_2	chr7	+	2347	8	ISM	ENSMUSG00000058454.16	ENSMUST00000124340.8	2556	9	608	0	0	0	3prime_fragment	FALSE	canonical	3	394	junction_5	16.39686381163	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTTGTACTGTCTCCT	NA	False	NA	32	True	NA	NA	NA	143383970	143402147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_143384003_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ENSMUSG00000058542.4_6181969_6182888_1	chr17	-	512	2	Genic_Genomic	ENSMUSG00000058542.4	novel	552	1	NA	NA	-208	160	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3402	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAAAAATAAATA	NA	False	NA	NA	False	AATAAA	-14	NA	6182888	6181968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_-_6182169_6182576
ENSMUSG00000058542.4_6181969_6182888_2	chr17	-	837	2	Genic_Genomic	ENSMUSG00000058542.4	novel	552	1	NA	NA	-208	160	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4311	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAAAAATAAATA	NA	False	NA	NA	False	AATAAA	-14	NA	6182888	6181968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_-_6182477_6182559
ENSMUSG00000058542.4_6181969_6182888_3	chr17	-	800	2	Genic_Genomic	ENSMUSG00000058542.4	novel	552	1	NA	NA	-208	160	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2566	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAAAAATAAATA	NA	False	NA	NA	False	AATAAA	-14	NA	6182888	6181968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_-_6182441_6182560
ENSMUSG00000058550.16_48104098_48114600_1	chr16	+	2213	7	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_4	181.921839138559	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104097	48114600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48110476_48111376_48111678_48113273_48113470_48114061
ENSMUSG00000058550.16_48104098_48114600_2	chr16	+	1374	7	NIC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_3	197.131653695922	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104097	48114600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_48104205_48108240_48108359_48109401_48109464_48109690_48109742_48111376_48111678_48113273_48113470_48114061
ENSMUSG00000058550.16_48104098_48114600_3	chr16	+	1473	7	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	199.070060252387	1752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104097	48114600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48109742_48111382_48111678_48113273_48113470_48114061
ENSMUSG00000058550.16_48104098_48114600_4	chr16	+	1472	7	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	185.027400373266	1657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104097	48114600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48109742_48111376_48111671_48113273_48113470_48114061
ENSMUSG00000058550.16_48104150_48114600_1	chr16	+	1512	8	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_3	208.929145298357	1559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104149	48114600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_48104205_48108240_48108359_48108984_48109070_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
ENSMUSG00000058558.13_108048368_108055921_1	chr5	+	1095	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	0	950	0	0	multi-exon	FALSE	canonical	3	7026	junction_3	385.215126750691	69045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGCTGTTATT	NA	False	NA	3	True	AATAAA	-21	NA	108048367	108055921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ENSMUSG00000058558.13_108048438_108055921_1	chr5	+	1019	8	NNC	ENSMUSG00000058558.13	novel	2045	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_6	2617.37048292708	6903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGCTGTTATT	NA	False	NA	3	True	AATAAA	-21	NA	108048437	108055921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055060_108055144_108055762
ENSMUSG00000058558.13_108048438_108055921_2	chr5	+	1025	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	70	950	0	0	multi-exon	FALSE	canonical	3	7026	junction_3	385.215126750691	62969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGCTGTTATT	NA	False	NA	3	True	AATAAA	-21	NA	108048437	108055921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ENSMUSG00000058579.6_141521155_141543287_1	chr4	-	3665	9	NIC	ENSMUSG00000058579.6	novel	1070	8	NA	NA	3226	21118	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGACCCCGGGTTCTGT	3761	False	NA	NA	False	NA	NA	NA	141543287	141521154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ENSMUSG00000058579.6_141542273_141546384_1	chr4	-	339	3	FSM	ENSMUSG00000058579.6	ENSMUST00000127962.2	468	3	129	0	129	0	multi-exon	FALSE	canonical	3	93	junction_1	12.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAATGAGTCTGTCTT	664	False	NA	-2	True	AATAAA	-18	NA	141546384	141542272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_141542367_141545175_141545329_141546292
ENSMUSG00000058579.6_141542273_141546657_1	chr4	-	530	4	NNC	ENSMUSG00000058579.6	novel	1070	8	NA	NA	-144	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	48.9239773072014	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAATGAGTCTGTCTT	391	False	NA	-2	True	AATAAA	-18	NA	141546657	141542272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_141542367_141545175_141545329_141546292_141546439_141546520
ENSMUSG00000058579.6_141542273_141546748_1	chr4	-	703	3	FSM	ENSMUSG00000058579.6	ENSMUST00000127962.2	468	3	-235	0	-235	0	multi-exon	FALSE	canonical	3	93	junction_1	12.5	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAATGAGTCTGTCTT	300	False	NA	-2	True	AATAAA	-18	NA	141546748	141542272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_141542367_141545175_141545329_141546292
ENSMUSG00000058579.6_141542273_141549333_1	chr4	-	728	6	NNC	ENSMUSG00000058579.6	novel	1070	8	NA	NA	-2820	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	47.5663746779172	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAATGAGTCTGTCTT	NA	False	NA	-2	True	AATAAA	-18	NA	141549333	141542272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_141542367_141545175_141545329_141546292_141546439_141548635_141548773_141549012_141549142_141549264
ENSMUSG00000058579.6_141542273_141549601_1	chr4	-	720	6	ISM	ENSMUSG00000058579.6	ENSMUST00000102481.4	1070	8	3870	0	-3088	0	3prime_fragment	FALSE	canonical	1	1	junction_5	48.4866992071021	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAATGAGTCTGTCTT	9822	False	NA	-2	True	AATAAA	-18	NA	141549601	141542272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_141542367_141545175_141545329_141546292_141546439_141548635_141548773_141549012_141549142_141549540
ENSMUSG00000058586.13_83000049_83006952_1	chr15	+	1898	7	NIC	ENSMUSG00000058586.13	novel	578	2	NA	NA	361	6077	intron_retention	TRUE	non_canonical	0	0	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACGGCTGGGAGTTC	NA	False	NA	NA	False	NA	NA	NA	83000048	83006952	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
ENSMUSG00000058586.13_83000049_83006952_2	chr15	+	1873	8	Genic_Genomic	ENSMUSG00000058586.13	novel	1371	12	NA	NA	361	6077	multi-exon	FALSE	non_canonical	0	0	junction_1	0	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACGGCTGGGAGTTC	NA	False	NA	NA	False	NA	NA	NA	83000048	83006952	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_83000327_83000351_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
ENSMUSG00000058586.13_83000049_83006952_3	chr15	+	1874	8	Genic_Genomic	ENSMUSG00000058586.13	novel	1371	12	NA	NA	361	6077	multi-exon	FALSE	non_canonical	0	0	junction_1	0	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACGGCTGGGAGTTC	NA	False	NA	NA	False	NA	NA	NA	83000048	83006952	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_83000332_83000355_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
ENSMUSG00000058587.10_75405398_75466939_1	chr9	-	3258	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	0	409	0	-409	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGACTGTTGGTCATT	NA	False	NA	0	True	AATAAA	-19	NA	75466939	75405397	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ENSMUSG00000058587.10_75406928_75466939_1	chr9	-	1728	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	0	1939	0	225	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGCTCAGAATCCATTAT	NA	False	NA	3	True	AATAAA	-18	NA	75466939	75406927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ENSMUSG00000058594.16_11747386_11782318_1	chr2	-	3520	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	88	junction_20	47.1269296687149	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782318	11747385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ENSMUSG00000058594.16_11747386_11782362_1	chr2	-	3562	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-1	0	intron_retention	FALSE	canonical	3	40	junction_19	58.1895824009762	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782362	11747385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774560_11774743_11782242
ENSMUSG00000058600.14_34440429_34443368_1	chr15	-	690	5	FSM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	418	-222	0	222	multi-exon	FALSE	canonical	3	3551	junction_4	804.634194836387	129355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGTTTTTAATCACTA	361	False	NA	NA	False	NA	NA	NA	34443368	34440428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443330
ENSMUSG00000058600.14_34440651_34443315_1	chr15	-	433	5	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	777	junction_4	1906.75842400132	7287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	414	False	NA	-20	True	AATAAA	-27	NA	34443315	34440650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443312
ENSMUSG00000058600.14_34440651_34443368_1	chr15	-	460	5	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2421.15689031091	8119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	361	False	NA	-20	True	AATAAA	-27	NA	34443368	34440650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_34440751_34441382_34441509_34442783_34442927_34443170_34443224_34443330
ENSMUSG00000058600.14_34440651_34443368_10	chr15	-	463	5	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2212.93905248202	7325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	361	False	NA	-20	True	AATAAA	-27	NA	34443368	34440650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_34440751_34441382_34441509_34442780_34442927_34443170_34443224_34443330
ENSMUSG00000058600.14_34440651_34443368_11	chr15	-	485	5	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2233.85031951561	7895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	361	False	NA	-20	True	AATAAA	-27	NA	34443368	34440650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443241_34443330
ENSMUSG00000058600.14_34440651_34443368_2	chr15	-	454	5	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2092.87445872895	4687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	361	False	NA	-20	True	AATAAA	-27	NA	34443368	34440650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_34440751_34441377_34441495_34442780_34442927_34443170_34443224_34443330
ENSMUSG00000058600.14_34440651_34443368_3	chr15	-	453	5	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1958.71327342723	4736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	361	False	NA	-20	True	AATAAA	-27	NA	34443368	34440650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_34440751_34441377_34441509_34442780_34442912_34443170_34443224_34443330
ENSMUSG00000058600.14_34440651_34443368_4	chr15	-	411	5	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	2088.83753556853	1339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	361	False	NA	-20	True	AATAAA	-27	NA	34443368	34440650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_34440751_34441377_34441452_34442780_34442927_34443170_34443224_34443330
ENSMUSG00000058600.14_34440651_34443368_5	chr15	-	455	5	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2092.87445872895	4862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	361	False	NA	-20	True	AATAAA	-27	NA	34443368	34440650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_34440751_34441377_34441509_34442793_34442927_34443170_34443224_34443330
ENSMUSG00000058600.14_34440651_34443368_6	chr15	-	712	4	NIC	ENSMUSG00000058600.14	novel	886	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	3551	junction_3	649.375084215586	2488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	361	False	NA	-20	True	AATAAA	-27	NA	34443368	34440650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_34440751_34441377_34441509_34442780_34443224_34443330
ENSMUSG00000058600.14_34440651_34443368_7	chr15	-	462	5	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	1957.05421169164	18314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	361	False	NA	-20	True	AATAAA	-27	NA	34443368	34440650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_34440751_34441377_34441509_34442780_34442921_34443170_34443224_34443330
ENSMUSG00000058600.14_34440651_34443368_8	chr15	-	1740	4	NIC	ENSMUSG00000058600.14	novel	886	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	3551	junction_3	873.300381057718	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	361	False	NA	-20	True	AATAAA	-27	NA	34443368	34440650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_34440751_34441377_34442927_34443170_34443224_34443330
ENSMUSG00000058600.14_34440651_34443368_9	chr15	-	462	5	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2092.87445872895	14234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	361	False	NA	-20	True	AATAAA	-27	NA	34443368	34440650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_34440751_34441377_34441509_34442786_34442927_34443170_34443224_34443330
ENSMUSG00000058638.15_12568964_12584252_1	chr7	+	3063	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	276	252	0	-252	multi-exon	FALSE	canonical	3	285	junction_1	17.0617127163813	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCTTTGAGGAATTTTT	NA	False	NA	NA	False	NA	NA	NA	12568963	12584252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ENSMUSG00000058655.10_101982299_102003871_1	chr15	+	2026	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	91	1737	0	237	multi-exon	FALSE	canonical	3	620	junction_1	87.2144027143242	2783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTCTAAACTTTTTTT	NA	False	NA	17	True	AATAAA	-17	NA	101982298	102003871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUSG00000058655.10_101982299_102004178_1	chr15	+	2333	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	91	1430	0	544	multi-exon	FALSE	canonical	3	620	junction_1	87.2144027143242	3954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACCTGAATTTACCTGAA	NA	False	NA	NA	False	NA	NA	NA	101982298	102004178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUSG00000058655.10_101982299_102005608_1	chr15	+	3763	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	91	0	0	0	multi-exon	FALSE	canonical	3	620	junction_1	87.2144027143242	7434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAATGTTGCAGTTTAT	NA	False	NA	49	True	AATAAA	-19	NA	101982298	102005608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUSG00000058672.8_34258257_34261990_1	chr13	-	1605	4	NNC	ENSMUSG00000058672.8	novel	1610	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	146.019024635681	1355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCCTTTTCTCTTCAACA	NA	False	NA	NA	False	AATAAA	-22	NA	34261990	34258256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_34259507_34260160_34260272_34260531_34260641_34261855
ENSMUSG00000058672.8_34258257_34261990_2	chr13	-	310	2	NNC	ENSMUSG00000058672.8	novel	1610	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCCTTTTCTCTTCAACA	NA	False	NA	NA	False	AATAAA	-22	NA	34261990	34258256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_34258493_34261916
ENSMUSG00000058704.10_74507697_74602491_1	chr17	-	1487	10	NIC	ENSMUSG00000058704.10	novel	1041	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	80.0302411977675	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	74602491	74507696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686_74601765_74602407
ENSMUSG00000058729.14_180468899_180518252_1	chr1	+	3119	16	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	32.1742478112888	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	9	True	AATAAA	-19	NA	180468898	180518252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_180468963_180469414_180469558_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ENSMUSG00000058748.10_4663167_4678279_1	chr8	+	412	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	0	1952	0	-1101	multi-exon	FALSE	canonical	3	165	junction_1	17.1075032271418	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGAATGTAATCCATG	NA	False	NA	NA	False	NA	NA	NA	4663166	4678279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
ENSMUSG00000058748.10_4663167_4679549_1	chr8	+	1800	5	NNC	ENSMUSG00000058748.10	novel	2364	4	NA	NA	0	169	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	75.6405975650642	839	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATGTGGTAAAGTCTTT	NA	False	NA	5	True	NA	NA	NA	4663166	4679549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_4663279_4674903_4675022_4675839_4675967_4676163_4676225_4678167
ENSMUSG00000058748.10_4663167_4679549_2	chr8	+	1682	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	0	682	0	169	multi-exon	FALSE	canonical	3	165	junction_1	17.1075032271418	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATGTGGTAAAGTCTTT	NA	False	NA	5	True	NA	NA	NA	4663166	4679549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
ENSMUSG00000058756.14_98658915_98666159_1	chr11	+	2564	8	NIC	ENSMUSG00000058756.14	novel	1240	9	NA	NA	14503	6327	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCAGGTACCATGTGATT	NA	False	NA	NA	False	NA	NA	NA	98658914	98666159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_98659246_98659874_98660086_98660528_98660715_98661013_98661658_98662025_98662171_98662262_98662352_98662618_98662961_98665543
ENSMUSG00000058793.15_132127859_132147305_1	chr2	+	1408	13	FSM	ENSMUSG00000058793.15	ENSMUST00000089461.11	8073	13	0	6665	0	57	multi-exon	FALSE	canonical	2	123	junction_1	89.520132744912	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGTCATTTTTTTTTCT	NA	False	NA	12	True	AATGAA	-14	NA	132127858	132147305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
ENSMUSG00000058799.17_111309103_111331007_1	chr10	+	1315	14	FSM	ENSMUSG00000058799.17	ENSMUST00000219961.2	1512	14	15	182	0	3	multi-exon	FALSE	canonical	3	75	junction_13	616.19895158057	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTGGGAAATTTTTC	NA	False	NA	19	True	AATAAA	-20	NA	111309102	111331007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111330911
ENSMUSG00000058799.17_111309103_111332745_1	chr10	+	1447	15	NIC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	635.455597446848	2834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309102	111332745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ENSMUSG00000058799.17_111309103_111332745_2	chr10	+	2115	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	0	-765	0	0	multi-exon	FALSE	canonical	3	980	junction_10	363.653962004586	3600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309102	111332745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ENSMUSG00000058799.17_111309103_111332745_3	chr10	+	1302	15	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	663.243529626816	1159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309102	111332745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111326260_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ENSMUSG00000058799.17_111309103_111334011_1	chr10	+	3381	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	0	-2031	0	0	multi-exon	FALSE	canonical	3	980	junction_10	363.653962004586	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGTGATATTTGAAGTT	NA	False	NA	NA	False	AATAAA	-24	NA	111309102	111334011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ENSMUSG00000058833.12_70956945_70959076_1	chr8	-	555	3	NIC	ENSMUSG00000058833.12	novel	632	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	61.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70959076	70956944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_70957160_70958405_70958611_70958941
ENSMUSG00000058835.15_22785631_22830278_1	chr2	-	1545	11	Fusion	ENSMUSG00000058835.15_ENSMUSG00000069136.5	novel	3360	10	NA	NA	6944	-298	intron_retention	FALSE	non_canonical	0	0	junction_1	0	639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCGCGGCGGGCCGTAG	NA	False	NA	NA	False	NA	NA	NA	22830278	22785630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_-_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
ENSMUSG00000058835.15_22785631_22830278_2	chr2	-	1431	10	Fusion	ENSMUSG00000058835.15_ENSMUSG00000069136.5	novel	3360	10	NA	NA	6944	-298	intron_retention	FALSE	non_canonical	0	0	junction_1	0	325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCGCGGCGGGCCGTAG	NA	False	NA	NA	False	NA	NA	NA	22830278	22785630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_-_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22825570_22825652_22829834
ENSMUSG00000058835.15_22830376_22930199_1	chr2	-	3061	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	8	291	0	0	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGATATTGTTAAAGTAT	NA	False	NA	-2	True	AATAAA	-21	NA	22930199	22830375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ENSMUSG00000058835.15_22830555_22930199_1	chr2	-	2882	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	8	470	0	-174	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGATTCCATATATATT	NA	False	NA	-11	True	ATTAAA	-20	NA	22930199	22830554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ENSMUSG00000058835.15_22831245_22930199_1	chr2	-	2192	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	8	1160	0	0	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTTTGGCCTCTCCT	NA	False	NA	-5	True	TATAAA	-31	NA	22930199	22831244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ENSMUSG00000058886.10_140877098_140893177_1	chr7	-	815	4	ISM	ENSMUSG00000058886.10	ENSMUST00000210062.2	2121	13	14229	0	0	0	3prime_fragment	FALSE	canonical	3	74	junction_2	15.1730755689881	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTGAATGTTGTCAAGC	7233	False	NA	-7	True	AATAAA	-24	NA	140893177	140877097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132
ENSMUSG00000058966.14_126394406_126398281_1	chr7	+	1357	9	NNC	ENSMUSG00000058966.14	novel	1915	9	NA	NA	-2434	-18120	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1635	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCGGCTAGGGTCACCAGAA	NA	False	NA	NA	False	NA	NA	NA	126394405	126398281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396707_126396810_126396949_126398216
ENSMUSG00000058966.14_126394406_126398355_1	chr7	+	1428	9	NNC	ENSMUSG00000058966.14	novel	1915	9	NA	NA	-2434	-18046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5609	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGGGAGGCGGGGCCCCG	NA	False	NA	NA	False	NA	NA	NA	126394405	126398355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396520_126396721_126396815_126396949_126398216
ENSMUSG00000058966.14_126394406_126398355_10	chr7	+	1588	10	NNC	ENSMUSG00000058966.14	novel	1915	9	NA	NA	-2434	-18046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3802	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGGGAGGCGGGGCCCCG	NA	False	NA	NA	False	NA	NA	NA	126394405	126398355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126397145_126397294_126398216
ENSMUSG00000058966.14_126394406_126398355_11	chr7	+	1426	9	NNC	ENSMUSG00000058966.14	novel	1915	9	NA	NA	-2434	-18046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGGGAGGCGGGGCCCCG	NA	False	NA	NA	False	NA	NA	NA	126394405	126398355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396707_126396815_126396949_126398216
ENSMUSG00000058966.14_126394406_126398355_12	chr7	+	1439	9	NNC	ENSMUSG00000058966.14	novel	1915	9	NA	NA	-2434	-18046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4934	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGGGAGGCGGGGCCCCG	NA	False	NA	NA	False	NA	NA	NA	126394405	126398355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_126394687_126394784_126394985_126395121_126395276_126395368_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ENSMUSG00000058966.14_126394406_126398355_13	chr7	+	1428	9	NNC	ENSMUSG00000058966.14	novel	1915	9	NA	NA	-2434	-18046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6803	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGGGAGGCGGGGCCCCG	NA	False	NA	NA	False	NA	NA	NA	126394405	126398355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_126394687_126394784_126394985_126395121_126395297_126395400_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ENSMUSG00000058966.14_126394406_126398355_14	chr7	+	1440	9	NIC	ENSMUSG00000058966.14	novel	1915	9	NA	NA	-2434	-18046	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	41187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGGGAGGCGGGGCCCCG	NA	False	NA	NA	False	NA	NA	NA	126394405	126398355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ENSMUSG00000058966.14_126394406_126398355_2	chr7	+	1428	9	NNC	ENSMUSG00000058966.14	novel	1915	9	NA	NA	-2434	-18046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3994	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGGGAGGCGGGGCCCCG	NA	False	NA	NA	False	NA	NA	NA	126394405	126398355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398228
ENSMUSG00000058966.14_126394406_126398355_3	chr7	+	1445	9	NNC	ENSMUSG00000058966.14	novel	1915	9	NA	NA	-2434	-18046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	29942	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGGGAGGCGGGGCCCCG	NA	False	NA	NA	False	NA	NA	NA	126394405	126398355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396810_126396949_126398216
ENSMUSG00000058966.14_126394406_126398355_4	chr7	+	1535	8	NIC	ENSMUSG00000058966.14	novel	1915	9	NA	NA	-2434	-18046	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGGGAGGCGGGGCCCCG	NA	False	NA	NA	False	NA	NA	NA	126394405	126398355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396949_126398216
ENSMUSG00000058966.14_126394406_126398355_5	chr7	+	1433	9	NNC	ENSMUSG00000058966.14	novel	1915	9	NA	NA	-2434	-18046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	9574	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGGGAGGCGGGGCCCCG	NA	False	NA	NA	False	NA	NA	NA	126394405	126398355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398223
ENSMUSG00000058966.14_126394406_126398355_6	chr7	+	1431	9	NNC	ENSMUSG00000058966.14	novel	1915	9	NA	NA	-2434	-18046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	11509	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGGGAGGCGGGGCCCCG	NA	False	NA	NA	False	NA	NA	NA	126394405	126398355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396072_126396508_126396721_126396815_126396949_126398216
ENSMUSG00000058966.14_126394406_126398355_7	chr7	+	1425	9	NNC	ENSMUSG00000058966.14	novel	1915	9	NA	NA	-2434	-18046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGGGAGGCGGGGCCCCG	NA	False	NA	NA	False	NA	NA	NA	126394405	126398355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396523_126396721_126396815_126396949_126398216
ENSMUSG00000058966.14_126394406_126398355_8	chr7	+	1423	9	NNC	ENSMUSG00000058966.14	novel	1915	9	NA	NA	-2434	-18046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGGGAGGCGGGGCCCCG	NA	False	NA	NA	False	NA	NA	NA	126394405	126398355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_126394687_126394784_126394985_126395121_126395276_126395384_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ENSMUSG00000058966.14_126394406_126398355_9	chr7	+	1433	9	NNC	ENSMUSG00000058966.14	novel	1915	9	NA	NA	-2434	-18046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	10717	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGGGAGGCGGGGCCCCG	NA	False	NA	NA	False	NA	NA	NA	126394405	126398355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_126394687_126394784_126394985_126395128_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ENSMUSG00000058966.14_126394406_126399775_1	chr7	+	1471	10	NIC	ENSMUSG00000058966.14	novel	1915	9	NA	NA	-2434	-16626	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1862	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAATGTCCTGCATCCTC	NA	False	NA	NA	False	NA	NA	NA	126394405	126399775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126399459_126399531_126399676
ENSMUSG00000059005.14_75489611_75496465_1	chr2	+	1864	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	3286	0	0	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	18474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7481	False	NA	NA	False	AAAAAG	-13	NA	75489610	75496465	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75489611_75496465_2	chr2	+	1930	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	6	-282	0	0	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	9455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7481	False	NA	NA	False	AAAAAG	-13	NA	75489610	75496465	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75489611_75496849_1	chr2	+	2248	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	2902	0	384	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	19292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTGGCATGCTTTC	7481	False	NA	20	True	AATAAA	-20	NA	75489610	75496849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_75489611_75497637_1	chr2	+	3036	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	2114	0	1172	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	19754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTCCTTTTATTCATA	7481	False	NA	NA	False	ATTAAA	-16	NA	75489610	75497637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059040.6_48179714_48181487_2	chr18	+	724	2	NNC	ENSMUSG00000059040.6	novel	1791	2	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACATAGCTGTTACTATT	NA	False	NA	NA	False	NA	NA	NA	48179713	48181487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_48180338_48181387
ENSMUSG00000059040.6_48179714_48181487_3	chr18	+	491	2	NNC	ENSMUSG00000059040.6	novel	1791	2	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACATAGCTGTTACTATT	NA	False	NA	NA	False	NA	NA	NA	48179713	48181487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_48180112_48181394
ENSMUSG00000059040.6_48179714_48181487_4	chr18	+	219	2	NNC	ENSMUSG00000059040.6	novel	1791	2	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACATAGCTGTTACTATT	NA	False	NA	NA	False	NA	NA	NA	48179713	48181487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_48179833_48181387
ENSMUSG00000059040.6_48179714_48181487_5	chr18	+	365	2	NNC	ENSMUSG00000059040.6	novel	1791	2	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACATAGCTGTTACTATT	NA	False	NA	NA	False	NA	NA	NA	48179713	48181487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_48179986_48181394
ENSMUSG00000059040.6_48179714_48181487_6	chr18	+	1336	2	Genic_Genomic	ENSMUSG00000059040.6	novel	1791	2	NA	NA	0	8	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACATAGCTGTTACTATT	NA	False	NA	NA	False	NA	NA	NA	48179713	48181487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_+_48179767_48180204
ENSMUSG00000059040.6_48179714_48181487_7	chr18	+	1346	2	NNC	ENSMUSG00000059040.6	novel	1791	2	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACATAGCTGTTACTATT	NA	False	NA	NA	False	NA	NA	NA	48179713	48181487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_48180797_48181224
ENSMUSG00000059060.16_79344125_79374180_1	chr12	+	852	7	NNC	ENSMUSG00000059060.16	novel	1759	8	NA	NA	0	-181250	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	21.6365174852352	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCCCTTTTCCTTCTT	8713	False	NA	NA	False	NA	NA	NA	79344124	79374180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_79344197_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994
ENSMUSG00000059119.10_143067316_143102565_1	chr7	-	2280	15	NIC	ENSMUSG00000059119.10	novel	2281	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_14	296.821538150795	1615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTTTTTTTGTTGTTT	NA	False	NA	-1	True	ATTAAA	-20	NA	143102565	143067315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102483
ENSMUSG00000059119.10_143067316_143102835_1	chr7	-	2282	16	NNC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	302.004959488343	1966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTTTTTTTGTTGTTT	NA	False	NA	-1	True	ATTAAA	-20	NA	143102835	143067315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093933_143093984_143095484_143095516_143102778
ENSMUSG00000059119.10_143067316_143102835_2	chr7	-	2245	14	NNC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	314.353266773802	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTTTTTTTGTTGTTT	NA	False	NA	-1	True	ATTAAA	-20	NA	143102835	143067315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_143068375_143074120_143074178_143077877_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ENSMUSG00000059119.10_143067316_143102835_3	chr7	-	2254	14	NNC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	-6	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	314.943500145699	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTTTTTTTGTTGTTT	NA	False	NA	-1	True	ATTAAA	-20	NA	143102835	143067315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078040_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ENSMUSG00000059182.9_51836146_51989529_1	chr6	-	1638	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	0	1744	0	0	multi-exon	FALSE	canonical	3	457	junction_9	27.4919180043073	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGACTTAGCCTGGTA	828	False	NA	-7	True	AATAAA	-18	NA	51989529	51836145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ENSMUSG00000059183.13_65343064_65359699_1	chr9	+	1405	9	FSM	ENSMUSG00000059183.13	ENSMUST00000074792.7	2042	9	0	637	0	0	multi-exon	FALSE	canonical	3	114	junction_5	22.1472345903501	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTTGTATCCTTTGAAG	NA	False	NA	27	True	AATAAA	-28	NA	65343063	65359699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65347731_65348894_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
ENSMUSG00000059208.16_33865207_33904366_1	chr17	-	2294	15	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	506.741088340234	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCCTTTTTTGTTTTTG	5767	False	NA	-2	True	AATAAA	-19	NA	33904366	33865206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33896241_33896415_33904240
ENSMUSG00000059208.16_33865207_33904366_2	chr17	-	2464	15	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	499.910221531663	2337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCCTTTTTTGTTTTTG	5767	False	NA	-2	True	AATAAA	-19	NA	33904366	33865206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889048_33889108_33896247_33896415_33904240
ENSMUSG00000059248.14_117223254_117251476_1	chr11	+	1175	10	FSM	ENSMUSG00000059248.14	ENSMUST00000106349.2	2932	10	83	1674	0	-216	multi-exon	FALSE	canonical	3	306	junction_1	107.436803129406	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTCCATCCATCTCTT	NA	False	NA	NA	False	NA	NA	NA	117223253	117251476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUSG00000059277.13_142606531_142621671_1	chr7	-	1478	8	NIC	ENSMUSG00000059277.13	novel	2482	5	NA	NA	-14248	-19510	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	8125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACCGGGCGCGCGCGCCT	NA	False	NA	NA	False	NA	NA	NA	142621671	142606530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ENSMUSG00000059277.13_142606531_142621671_2	chr7	-	1469	8	NNC	ENSMUSG00000059277.13	novel	2482	5	NA	NA	-14248	-19510	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3524	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACCGGGCGCGCGCGCCT	NA	False	NA	NA	False	NA	NA	NA	142621671	142606530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620962_142621048
ENSMUSG00000059277.13_142606531_142621671_3	chr7	-	1468	8	NNC	ENSMUSG00000059277.13	novel	2482	5	NA	NA	-14248	-19510	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4509	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACCGGGCGCGCGCGCCT	NA	False	NA	NA	False	NA	NA	NA	142621671	142606530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_142606804_142616239_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ENSMUSG00000059277.13_142606531_142621671_5	chr7	-	1469	8	NNC	ENSMUSG00000059277.13	novel	2482	5	NA	NA	-14248	-19510	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2077	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACCGGGCGCGCGCGCCT	NA	False	NA	NA	False	NA	NA	NA	142621671	142606530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_142606795_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ENSMUSG00000059277.13_142606531_142621671_6	chr7	-	1403	7	NIC	ENSMUSG00000059277.13	novel	2482	5	NA	NA	-14248	-19510	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	519	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACCGGGCGCGCGCGCCT	NA	False	NA	NA	False	NA	NA	NA	142621671	142606530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_142606804_142616229_142616345_142618945_142619044_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ENSMUSG00000059277.13_142606531_142621671_7	chr7	-	1310	9	Genic_Genomic	ENSMUSG00000059277.13	novel	2482	5	NA	NA	-14248	-19510	multi-exon	FALSE	non_canonical	0	0	junction_1	0	764	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACCGGGCGCGCGCGCCT	NA	False	NA	NA	False	NA	NA	NA	142621671	142606530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_142606582_142606749_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ENSMUSG00000059278.10_69286313_69287506_1	chr11	+	540	3	NIC	ENSMUSG00000059278.10	novel	671	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	615.5	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCTGTGTGTAGGT	NA	False	NA	17	True	ATTAAA	-17	NA	69286312	69287506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_69286508_69287002_69287187_69287345
ENSMUSG00000059278.10_69286640_69287506_1	chr11	+	504	3	FSM	ENSMUSG00000059278.10	ENSMUST00000144531.2	671	3	167	0	0	0	multi-exon	FALSE	canonical	3	948	junction_1	166	6629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCTGTGTGTAGGT	NA	False	NA	17	True	ATTAAA	-17	NA	69286639	69287506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69286799_69287002_69287187_69287345
ENSMUSG00000059288.15_35922440_36058045_1	chr13	+	3260	8	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2856	-1	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_1	86.1488981534948	377	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGGAGTGTTTCTCTGC	NA	False	NA	17	True	AATAAA	-18	NA	35922439	36058045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_35922622_35974083_35974159_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
ENSMUSG00000059291.16_135777258_135780704_1	chr4	-	617	6	FSM	ENSMUSG00000059291.16	ENSMUST00000102536.11	833	6	0	216	0	0	multi-exon	FALSE	canonical	3	383	junction_1	3915.89487090754	123946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACAGTTGTGTGTTTGT	NA	False	NA	-4	True	AATAAA	-40	NA	135780704	135777257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780658
ENSMUSG00000059326.8_61212840_61215121_1	chr19	-	1428	8	ISM	ENSMUSG00000059326.8	ENSMUST00000237386.2	1771	11	693	-9	0	0	3prime_fragment	FALSE	canonical	3	89	junction_6	20.6861878398834	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9871	False	NA	-2	True	NA	NA	NA	61215121	61212839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214652_61214823_61214962
ENSMUSG00000059355.14_85807602_85808961_1	chr8	+	682	4	FSM	ENSMUSG00000059355.14	ENSMUST00000079764.14	922	4	233	7	0	0	multi-exon	FALSE	canonical	3	586	junction_1	13.7679176187089	2509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCACTGTTGCTTCTCT	NA	False	NA	29	True	TATAAA	-18	NA	85807601	85808961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85807693_85807801_85807908_85808405_85808504_85808574
ENSMUSG00000059355.14_85807602_85808961_2	chr8	+	675	4	NNC	ENSMUSG00000059355.14	novel	922	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	284.706086263634	2304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCACTGTTGCTTCTCT	NA	False	NA	29	True	TATAAA	-18	NA	85807601	85808961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_85807693_85807808_85807908_85808405_85808504_85808574
ENSMUSG00000059363.11_24239120_24257969_2	chr19	-	811	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	0	303	0	106	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCCCGGACCTGGCT	NA	False	NA	-7	True	AAAAAG	-15	NA	24257969	24239119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
ENSMUSG00000059363.11_24239226_24257969_1	chr19	-	705	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	0	409	0	0	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCCAGCCTCCTCCTGT	NA	False	NA	-14	True	ATTAAA	-15	NA	24257969	24239225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
ENSMUSG00000059409.10_46991384_46994031_1	chr17	-	816	4	NIC	ENSMUSG00000059409.10	novel	1587	4	NA	NA	2221	2533	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAATCAGGAAGCTGA	NA	False	NA	NA	False	NA	NA	NA	46994031	46991383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_46991429_46992542_46992824_46992934_46993038_46993644
ENSMUSG00000059409.10_46992050_46994031_1	chr17	-	853	4	NIC	ENSMUSG00000059409.10	novel	1587	4	NA	NA	2221	1867	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGGGCAGGACATGCTGG	NA	False	NA	NA	False	NA	NA	NA	46994031	46992049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_46992132_46992542_46992824_46992934_46993038_46993644
ENSMUSG00000059412.8_45314512_45321576_1	chr9	+	536	5	NNC	ENSMUSG00000059412.8	novel	632	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.9821891546978	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGAGTGCTTATCATTC	NA	False	NA	34	True	AATGAA	-20	NA	45314511	45321576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_45314618_45319597_45319673_45320810_45320848_45321000_45321032_45321289
ENSMUSG00000059423.14_147911204_147932875_1	chr4	-	529	4	FSM	ENSMUSG00000059423.14	ENSMUST00000105718.8	4238	4	-52	3761	-52	0	multi-exon	FALSE	canonical	3	42	junction_2	6.37704215656966	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATGTAATCAGTGTGGG	3889	False	NA	NA	False	NA	NA	NA	147932875	147911203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147911404_147912866_147912928_147913126_147913254_147932734
ENSMUSG00000059423.14_147911335_147932875_1	chr4	-	398	4	FSM	ENSMUSG00000059423.14	ENSMUST00000105718.8	4238	4	-52	3892	-52	-131	multi-exon	FALSE	canonical	3	42	junction_2	6.37704215656966	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTATCCTCAGTGGCATG	3889	False	NA	NA	False	NA	NA	NA	147932875	147911334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147911404_147912866_147912928_147913126_147913254_147932734
ENSMUSG00000059436.14_76984043_77008992_1	chr12	-	2049	5	NNC	ENSMUSG00000059436.14	novel	1942	5	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	26.5988721565408	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTAGTGTCTTCTTAAC	NA	False	NA	0	True	AATAAA	-20	NA	77008992	76984042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_76985530_76986187_76986289_76986740_76986865_76999942_77000051_77008763
ENSMUSG00000059436.14_76984043_77008992_3	chr12	-	2734	5	NIC	ENSMUSG00000059436.14	novel	1942	5	NA	NA	-17	0	intron_retention	FALSE	canonical	3	16	junction_4	22.1288838399048	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTAGTGTCTTCTTAAC	NA	False	NA	0	True	AATAAA	-20	NA	77008992	76984042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_76986289_76986740_76986865_76999942_77000051_77008036_77008064_77008763
ENSMUSG00000059436.14_76984043_77008992_4	chr12	-	2707	4	NIC	ENSMUSG00000059436.14	novel	1942	5	NA	NA	-17	0	intron_retention	FALSE	canonical	3	20	junction_1	20.7257220756131	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTAGTGTCTTCTTAAC	NA	False	NA	0	True	AATAAA	-20	NA	77008992	76984042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_76986289_76986740_76986865_76999942_77000051_77008763
ENSMUSG00000059436.14_76984449_77008992_1	chr12	-	1569	5	FSM	ENSMUSG00000059436.14	ENSMUST00000110395.11	1942	5	-33	406	-17	-401	multi-exon	FALSE	canonical	3	16	junction_4	22.1697992773954	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTCTGTGTGTATTTC	NA	False	NA	0	True	CATAAA	-19	NA	77008992	76984448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_76985530_76986740_76986865_76999942_77000051_77008036_77008064_77008763
ENSMUSG00000059447.14_30360301_30389583_1	chr5	+	1955	15	NNC	ENSMUSG00000059447.14	novel	2033	16	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	151.718186659561	1720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTTCGTAGTCTCGTT	NA	False	NA	2	True	AATAAA	-17	NA	30360300	30389583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371793_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUSG00000059447.14_30360301_30389583_2	chr5	+	129	3	NNC	ENSMUSG00000059447.14	novel	763	9	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	224.5	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTTCGTAGTCTCGTT	NA	False	NA	2	True	AATAAA	-17	NA	30360300	30389583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_30360338_30368666_30368710_30389534
ENSMUSG00000059479.8_25329371_25358179_1	chr7	+	1672	9	NIC	ENSMUSG00000059479.8	novel	5756	3	NA	NA	2304	23654	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	458	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTCCTTTCTCACAGGA	NA	False	NA	NA	False	NA	NA	NA	25329370	25358179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_25329859_25330424_25330597_25330766_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25358057
ENSMUSG00000059518.15_137011044_137015704_1	chr5	-	684	5	NNC	ENSMUSG00000059518.15	novel	740	5	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	141.14620079903	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTCATTCTGGGGTAT	NA	False	NA	6	True	AATAAA	-22	NA	137015704	137011043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_137011272_137011371_137011542_137011721_137011797_137013732_137013904_137015664
ENSMUSG00000059518.15_137011044_137015704_2	chr5	-	678	5	NNC	ENSMUSG00000059518.15	novel	740	5	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	141.14620079903	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTCATTCTGGGGTAT	NA	False	NA	6	True	AATAAA	-22	NA	137015704	137011043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_137011272_137011371_137011542_137011721_137011791_137013732_137013904_137015664
ENSMUSG00000059518.15_137011044_137016397_1	chr5	-	699	5	NNC	ENSMUSG00000059518.15	novel	1208	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	156.269598770842	671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTCATTCTGGGGTAT	NA	False	NA	6	True	AATAAA	-22	NA	137016397	137011043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_137011272_137011371_137011542_137011721_137011797_137013732_137013904_137016342
ENSMUSG00000059552.14_69471231_69482131_1	chr11	+	1254	11	FSM	ENSMUSG00000059552.14	ENSMUST00000108657.4	1822	11	0	568	0	-567	multi-exon	FALSE	canonical	3	351	junction_10	535.886405873484	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCCCATCACTTCATCC	NA	False	NA	NA	False	NA	NA	NA	69471230	69482131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
ENSMUSG00000059552.14_69471231_69482699_2	chr11	+	1704	10	NIC	ENSMUSG00000059552.14	novel	1772	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	672.180714971983	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471230	69482699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_69471342_69477716_69477800_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ENSMUSG00000059552.14_69471231_69482699_3	chr11	+	1719	11	NNC	ENSMUSG00000059552.14	novel	1772	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	628.030381430708	4385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471230	69482699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478452_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ENSMUSG00000059552.14_69471231_69482699_4	chr11	+	1728	10	NNC	ENSMUSG00000059552.14	novel	1772	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	672.180714971983	2172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471230	69482699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_69471342_69477716_69477800_69478173_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ENSMUSG00000059552.14_69471231_69482699_5	chr11	+	2457	10	NIC	ENSMUSG00000059552.14	novel	1772	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1895	junction_3	129.307080191513	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471230	69482699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ENSMUSG00000059552.14_69471231_69482699_6	chr11	+	1800	10	NIC	ENSMUSG00000059552.14	novel	1822	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	821.763280324017	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471230	69482699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_69471342_69477716_69477800_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
ENSMUSG00000059552.14_69471231_69482699_7	chr11	+	1735	10	NNC	ENSMUSG00000059552.14	novel	1772	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	672.180714971983	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471230	69482699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_69471342_69477716_69477800_69478166_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ENSMUSG00000059552.14_69471231_69482699_8	chr11	+	1805	10	NIC	ENSMUSG00000059552.14	novel	1772	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1895	junction_3	137.00455070391	4160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471230	69482699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480689_69481481_69481589_69482175
ENSMUSG00000059554.13_18093913_18110726_1	chr10	-	874	5	FSM	ENSMUSG00000059554.13	ENSMUST00000052648.9	2255	5	0	1381	0	-1381	multi-exon	FALSE	canonical	3	18	junction_1	22.796655456448	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGGGAGCTAGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	18110726	18093912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ENSMUSG00000059586.11_59246096_59327552_1	chr15	+	778	4	ISM	ENSMUSG00000059586.11	ENSMUST00000168722.3	2679	5	0	83961	0	-83961	5prime_fragment	FALSE	canonical	3	929	junction_1	3.85861230093008	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACAATGGTAATTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	59246095	59327552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161
ENSMUSG00000059586.11_59246096_59473533_1	chr15	+	1081	7	NNC	ENSMUSG00000059586.11	novel	1054	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	325.590958446672	2884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	16	True	AATAAA	-17	NA	59246095	59473533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_59246192_59250716_59250888_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
ENSMUSG00000059586.11_59246096_59473533_2	chr15	+	1087	7	NNC	ENSMUSG00000059586.11	novel	1054	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	332.141870624922	2850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	16	True	AATAAA	-17	NA	59246095	59473533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_59246205_59250716_59250888_59287873_59287981_59327168_59327316_59463545_59463647_59463986_59464094_59473188
ENSMUSG00000059586.11_59246096_59473533_3	chr15	+	1165	8	NNC	ENSMUSG00000059586.11	novel	1122	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	401.852445252112	797	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	16	True	AATAAA	-17	NA	59246095	59473533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_59246205_59250716_59250888_59287873_59287981_59327168_59327316_59368625_59368704_59463545_59463647_59463986_59464094_59473188
ENSMUSG00000059586.11_59246096_59473533_4	chr15	+	923	6	NIC	ENSMUSG00000059586.11	novel	1054	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	346.521225901098	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	16	True	AATAAA	-17	NA	59246095	59473533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_59246205_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
ENSMUSG00000059586.11_59246096_59473533_5	chr15	+	1088	7	NNC	ENSMUSG00000059586.11	novel	1054	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	331.929544063529	3077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	16	True	AATAAA	-17	NA	59246095	59473533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_59246205_59250716_59250888_59287879_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
ENSMUSG00000059659.8_128443399_128480244_1	chr6	+	872	4	NNC	ENSMUSG00000059659.8	novel	907	5	NA	NA	-7154	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	4.54606056566195	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAATTGTTATTCACTT	4583	False	NA	NA	False	AATGAA	-14	NA	128443398	128480244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_128443615_128465853_128465987_128479128_128479327_128479919
ENSMUSG00000059689.16_117818207_117822917_1	chr6	+	1224	3	FSM	ENSMUSG00000059689.16	ENSMUST00000136889.8	659	3	-22	-543	0	0	multi-exon	FALSE	canonical	3	25	junction_1	15.5	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATTTTTCATAATTT	NA	False	NA	11	True	AATAAA	-18	NA	117818206	117822917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_117818359_117820213_117820354_117821985
ENSMUSG00000059714.14_36134239_36143683_1	chr17	+	1708	13	FSM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	117	0	0	0	multi-exon	FALSE	canonical	3	176	junction_8	11.7434970184448	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATACTTCTTTCCTCACT	NA	False	NA	25	True	ATTAAA	-23	NA	36134238	36143683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_36134394_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
ENSMUSG00000059734.8_3958870_3962488_1	chr19	-	731	7	FSM	ENSMUSG00000059734.8	ENSMUST00000235847.2	977	7	246	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	709.089557108268	4686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTACCTGTTGTGTTGT	NA	False	NA	-8	True	CATAAA	-15	NA	3962488	3958869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962469
ENSMUSG00000059734.8_3958870_3962750_1	chr19	-	748	7	NNC	ENSMUSG00000059734.8	novel	780	7	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	691.651987796046	5309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTACCTGTTGTGTTGT	NA	False	NA	-8	True	CATAAA	-15	NA	3962750	3958869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961570_3961617_3961688_3961747_3962709
ENSMUSG00000059772.13_126289850_126294811_1	chr7	-	1745	5	FSM	ENSMUSG00000059772.13	ENSMUST00000142337.7	1390	5	85	-440	0	0	multi-exon	FALSE	canonical	3	27	junction_4	31.8276609256791	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAAAGTTCTAGCCG	5132	False	NA	NA	False	NA	NA	NA	126294811	126289849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126294596
ENSMUSG00000059772.13_126289850_126294956_1	chr7	-	1890	5	FSM	ENSMUSG00000059772.13	ENSMUST00000142337.7	1390	5	-60	-440	0	0	multi-exon	FALSE	canonical	3	27	junction_4	31.8276609256791	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAAAGTTCTAGCCG	4987	False	NA	NA	False	NA	NA	NA	126294956	126289849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126294596
ENSMUSG00000059772.13_126289850_126294956_2	chr7	-	1942	6	FSM	ENSMUSG00000059772.13	ENSMUST00000144897.2	3152	6	0	1210	0	0	multi-exon	FALSE	canonical	3	82	junction_4	7.98498591107085	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAAAGTTCTAGCCG	4987	False	NA	NA	False	NA	NA	NA	126294956	126289849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126291924_126291977_126294596
ENSMUSG00000059791.15_36172230_36176294_1	chr17	+	1249	3	FSM	ENSMUSG00000059791.15	ENSMUST00000172931.2	302	3	-148	-799	0	0	multi-exon	FALSE	canonical	1	2	junction_1	132.5	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTGTCTGTCCATGAC	4609	False	NA	24	True	AATAAA	-18	NA	36172229	36176294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_36172410_36175003_36175181_36175402
ENSMUSG00000059796.17_69557762_69563141_1	chr11	-	1767	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4165.61858071523	22694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGCTTCTTGTTTCTT	NA	False	NA	64	True	AATAAA	-19	NA	69563141	69557761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_69558444_69558520_69558596_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ENSMUSG00000059796.17_69558048_69563141_1	chr11	-	1481	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4165.61858071523	11500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAACACTAATGCATTTC	NA	False	NA	61	True	NA	NA	NA	69563141	69558047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_69558444_69558520_69558596_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ENSMUSG00000059796.17_69558048_69563141_2	chr11	-	1486	11	FSM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	2	286	0	0	multi-exon	FALSE	canonical	3	9657	junction_10	1402.57834362292	13518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAACACTAATGCATTTC	NA	False	NA	61	True	NA	NA	NA	69563141	69558047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ENSMUSG00000059796.17_69558279_69563141_1	chr11	-	1255	11	FSM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	2	517	0	0	multi-exon	FALSE	canonical	3	9657	junction_10	1402.57834362292	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGCCCAGGGTTCAGTC	NA	False	NA	-124	True	GGGGCT	-15	NA	69563141	69558278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ENSMUSG00000059796.17_69560461_69563141_1	chr11	-	1199	3	ISM	ENSMUSG00000059796.17	ENSMUST00000123995.8	3167	7	2	2698	0	-472	5prime_fragment	FALSE	canonical	3	9657	junction_2	1754.5	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCTGAAGCTAATTAAGA	NA	False	NA	NA	False	NA	NA	NA	69563141	69560460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_69561574_69561753_69561803_69563104
ENSMUSG00000059810.19_62501838_62525648_1	chr4	+	484	5	NNC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	0	-16505	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	32.2286751201473	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGGCCTCTCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	62501837	62525648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525482
ENSMUSG00000059811.14_80156492_80203482_1	chr17	-	2875	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	70	673	-2	0	multi-exon	FALSE	canonical	3	301	junction_5	41.6619997386374	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	3821	False	NA	NA	False	ATTAAA	-21	NA	80203482	80156491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ENSMUSG00000059811.14_80157556_80203482_1	chr17	-	1811	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	70	1737	-2	0	multi-exon	FALSE	canonical	3	301	junction_5	41.6619997386374	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATGCTTGCTGTACAA	3821	False	NA	-62	True	ATTAAA	-43	NA	80203482	80157555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ENSMUSG00000059816.6_108224974_108237218_1	chr4	-	735	3	NNC	ENSMUSG00000059816.6	novel	593	3	NA	NA	3328	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	22.5	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATCATTACTTCTGGAA	NA	False	NA	-11	True	AATAAA	-6	NA	108237218	108224973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_108225239_108234543_108234684_108236888
ENSMUSG00000059824.13_45357313_45359582_1	chr7	+	1077	2	FSM	ENSMUSG00000059824.13	ENSMUST00000210120.2	815	2	0	-262	0	44	multi-exon	FALSE	canonical	3	63	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTGTGGCGGACAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	45357312	45359582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45357896_45359088
ENSMUSG00000059851.16_4743155_4750513_1	chr7	+	2201	8	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	241.546801143913	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4748785_4748938_4749075_4749261_4749375
ENSMUSG00000059851.16_4743155_4750513_2	chr7	+	2537	8	NIC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	456	junction_1	90.2970155675599	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_4743239_4744778_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ENSMUSG00000059851.16_4743155_4750513_3	chr7	+	2170	9	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_6	216.601448517779	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748836_4748938_4749075_4749261_4749375
ENSMUSG00000059851.16_4743155_4750513_4	chr7	+	1161	2	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_4743198_4749395
ENSMUSG00000059851.16_4743155_4750513_5	chr7	+	1089	2	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_4743209_4749478
ENSMUSG00000059866.14_34653431_34671285_1	chr5	-	2125	5	NIC	ENSMUSG00000059866.14	novel	1987	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	117	junction_4	10.0623058987491	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGAGCTGGGCTGGA	NA	False	NA	-10	True	AATAAA	-19	NA	34671285	34653430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_34654295_34656523_34657081_34658251_34658342_34660880_34661172_34670962
ENSMUSG00000059878.13_116601883_116605960_1	chr6	-	2281	2	FSM	ENSMUSG00000059878.13	ENSMUST00000079749.6	3187	2	0	906	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTACTATCTATTTTACT	NA	False	NA	-5	True	AATAAA	-18	NA	116605960	116601882	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_116604095_116605891
ENSMUSG00000059883.17_94441524_94460014_1	chr15	+	1518	10	NNC	ENSMUSG00000059883.17	novel	2831	12	NA	NA	0	5180	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	10.2101377845868	639	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTGTCTTGGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	94441523	94460014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_94441708_94445716_94445885_94449683_94449830_94451715_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94459812
ENSMUSG00000059883.17_94441524_94460014_2	chr15	+	1533	10	NNC	ENSMUSG00000059883.17	novel	2831	12	NA	NA	0	5180	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	9.63788819653397	1057	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTGTCTTGGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	94441523	94460014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_94441708_94445716_94445885_94449683_94449830_94451715_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94459797
ENSMUSG00000059883.17_94475832_94487760_1	chr15	+	1332	10	Genic_Genomic	ENSMUSG00000059883.17	novel	3437	12	NA	NA	34279	8064	multi-exon	TRUE	non_canonical	0	0	junction_1	0	516	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCCCCGCCCCCAGCA	NA	False	NA	NA	False	NA	NA	NA	94475831	94487760	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_94475898_94477590_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ENSMUSG00000059883.17_94475832_94487760_2	chr15	+	2947	8	NIC	ENSMUSG00000059883.17	novel	3437	12	NA	NA	34279	8064	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCCCCGCCCCCAGCA	NA	False	NA	NA	False	NA	NA	NA	94475831	94487760	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94487632
ENSMUSG00000059897.6_69661698_69680633_1	chr8	+	438	4	FSM	ENSMUSG00000059897.6	ENSMUST00000212681.2	3001	4	8	2555	0	-113	multi-exon	FALSE	canonical	3	90	junction_1	2.49443825784929	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTGTAGATTACTGTAC	7208	False	NA	NA	False	NA	NA	NA	69661697	69680633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_69661812_69678994_69679122_69679323_69679382_69680494
ENSMUSG00000059897.6_69661698_69681786_1	chr8	+	1591	4	FSM	ENSMUSG00000059897.6	ENSMUST00000212681.2	3001	4	8	1402	0	154	multi-exon	FALSE	canonical	3	90	junction_1	2.49443825784929	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTGTAGTCAGTGTGGT	7208	False	NA	NA	False	NA	NA	NA	69661697	69681786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_69661812_69678994_69679122_69679323_69679382_69680494
ENSMUSG00000059900.15_115706092_115711912_1	chr6	-	987	7	FSM	ENSMUSG00000059900.15	ENSMUST00000151849.2	927	7	342	-402	0	0	multi-exon	FALSE	canonical	3	40	junction_5	15.4344492037203	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGACTAAATATTCCTTTA	NA	False	NA	NA	False	AATAAA	-30	NA	115711912	115706091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770
ENSMUSG00000059900.15_115706092_115737222_1	chr6	-	1506	13	NNC	ENSMUSG00000059900.15	novel	1554	12	NA	NA	-990	0	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_9	21.6260837878706	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGACTAAATATTCCTTTA	NA	False	NA	NA	False	AATAAA	-30	NA	115737222	115706091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115715908_115715984_115718501_115718634_115719270_115719349_115736555_115736685_115737065
ENSMUSG00000059939.14_156194442_156211722_1	chr4	+	2847	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	88	junction_1	48.8618908250592	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8258	False	NA	22	True	NA	NA	NA	156194441	156211722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ENSMUSG00000059939.14_156194487_156211722_1	chr4	+	3042	8	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	85	junction_1	45.1781055876604	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8303	False	NA	22	True	NA	NA	NA	156194486	156211722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208580_156209873
ENSMUSG00000060036.15_79961992_79967554_1	chr15	-	1291	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	9979.59910993732	122733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTCCCACATTTCTTT	3571	False	NA	-1	True	AATAAA	-17	NA	79967554	79961991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965226_79965815_79965985_79966590_79966784_79967524
ENSMUSG00000060036.15_79961992_79967554_2	chr15	-	1293	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	9911.61003602204	119469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTCCCACATTTCTTT	3571	False	NA	-1	True	AATAAA	-17	NA	79967554	79961991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_79962096_79962187_79962308_79962536_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ENSMUSG00000060036.15_79961992_79967554_3	chr15	-	1290	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	453	junction_9	9476.19179253401	122759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTCCCACATTTCTTT	3571	False	NA	-1	True	AATAAA	-17	NA	79967554	79961991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966776_79967524
ENSMUSG00000060036.15_79961992_79967554_4	chr15	-	1478	10	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	214	junction_7	9920.80080773053	7101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTCCCACATTTCTTT	3571	False	NA	-1	True	AATAAA	-17	NA	79967554	79961991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
ENSMUSG00000060038.15_85798930_85801791_2	chr8	+	1187	8	ISM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	544	0	0	0	3prime_fragment	FALSE	canonical	3	191	junction_1	37.2788718406859	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCATCCTTGGTGTCAG	NA	False	NA	23	True	AATAAA	-29	NA	85798929	85801791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
ENSMUSG00000060038.15_85801664_85807315_1	chr8	+	1460	8	NIC	ENSMUSG00000060038.15	novel	1166	8	NA	NA	336	5524	intron_retention	FALSE	non_canonical	0	0	junction_1	0	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGACTTGCTCGAGTGT	NA	False	NA	NA	False	NA	NA	NA	85801663	85807315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_85801973_85802451_85802567_85802652_85802762_85802845_85802914_85806209_85806337_85806417_85806855_85806941_85807063_85807141
ENSMUSG00000060063.10_149201855_149224963_1	chr5	+	973	5	FSM	ENSMUSG00000060063.10	ENSMUST00000071130.5	1251	5	278	0	278	0	multi-exon	FALSE	canonical	3	24	junction_2	7.22841614740048	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGAGTCTTTTATTGAC	NA	False	NA	20	True	ATTAAA	-32	NA	149201854	149224963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_149201993_149209190_149209291_149215985_149216057_149222153_149222236_149224381
ENSMUSG00000060073.10_71021463_71041279_1	chr12	+	923	11	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1204.30011209831	3669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4788	False	NA	5	True	ATTAAA	-16	NA	71021462	71041279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_71021542_71025519_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71021463_71041279_10	chr12	+	925	11	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1259.13105354447	3556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4788	False	NA	5	True	ATTAAA	-16	NA	71021462	71041279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039797_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71021463_71041279_11	chr12	+	1044	12	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	1509.62149489574	880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4788	False	NA	5	True	ATTAAA	-16	NA	71021462	71041279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_71021542_71025506_71025590_71025674_71025783_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71021463_71041279_12	chr12	+	916	10	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1290.37222115783	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4788	False	NA	5	True	ATTAAA	-16	NA	71021462	71041279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71033582_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71021463_71041279_13	chr12	+	967	11	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_3	1245.16007404671	12021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4788	False	NA	5	True	ATTAAA	-16	NA	71021462	71041279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031235_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71021463_71041279_2	chr12	+	955	11	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	1246.29478455139	10532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4788	False	NA	5	True	ATTAAA	-16	NA	71021462	71041279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031426_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71021463_71041279_3	chr12	+	930	11	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1260.34695619897	15190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4788	False	NA	5	True	ATTAAA	-16	NA	71021462	71041279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037264_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71021463_71041279_4	chr12	+	927	11	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1260.2918273162	5976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4788	False	NA	5	True	ATTAAA	-16	NA	71021462	71041279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040288_71040345_71041124
ENSMUSG00000060073.10_71021463_71041279_5	chr12	+	921	11	NNC	ENSMUSG00000060073.10	novel	875	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	1518.11830896014	2112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4788	False	NA	5	True	ATTAAA	-16	NA	71021462	71041279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_71021542_71025506_71025590_71030097_71030217_71031266_71031369_71031455_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71021463_71041279_6	chr12	+	834	10	NIC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1314.64306755169	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4788	False	NA	5	True	ATTAAA	-16	NA	71021462	71041279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71021463_71041279_7	chr12	+	382	4	NIC	ENSMUSG00000060073.10	novel	562	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	2010.74452767018	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4788	False	NA	5	True	ATTAAA	-16	NA	71021462	71041279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_71021542_71025506_71025590_71040279_71040345_71041124
ENSMUSG00000060073.10_71021463_71041279_8	chr12	+	812	10	NIC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_2	1274.53376612299	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4788	False	NA	5	True	ATTAAA	-16	NA	71021462	71041279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_71021542_71025506_71025590_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71021463_71041279_9	chr12	+	870	10	NIC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	6	junction_6	1323.58123436026	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4788	False	NA	5	True	ATTAAA	-16	NA	71021462	71041279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71021489_71041279_2	chr12	+	982	10	NIC	ENSMUSG00000060073.10	novel	875	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	320	junction_2	1171.34194436009	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4814	False	NA	5	True	ATTAAA	-16	NA	71021488	71041279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_71021542_71025506_71025590_71030097_71030217_71031266_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060073.10_71021489_71041695_1	chr12	+	1326	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	94	1426	0	0	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	13929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4814	False	NA	NA	False	NA	NA	NA	71021488	71041695	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060098.12_106937655_106978326_1	chr8	+	2281	17	NNC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	0	-1100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	268.018306277762	2835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTGGCTCAATGGGG	1906	False	NA	26	True	AATAAA	-27	NA	106937654	106978326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_106937715_106939007_106939237_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ENSMUSG00000060098.12_106937655_106978326_2	chr8	+	2285	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	87	1100	0	-1100	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	2895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTGGCTCAATGGGG	1906	False	NA	26	True	AATAAA	-27	NA	106937654	106978326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ENSMUSG00000060121.16_59060240_59074732_2	chr12	+	934	9	NIC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	0	59	combination_of_known_splicesites	FALSE	canonical	1	10	junction_6	288.756818101322	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCTGAAATGTCTGTGAA	NA	False	NA	7	True	AATATA	-18	NA	59060239	59074732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59071788_59071900_59073640_59073700_59074522
ENSMUSG00000060121.16_59060240_59074952_1	chr12	+	1223	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	61	304	0	-233	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	2016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCGGGCTGGAAGTTTTC	NA	False	NA	NA	False	NA	NA	NA	59060239	59074952	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ENSMUSG00000060126.15_76082742_76085737_1	chr14	+	842	6	FSM	ENSMUSG00000060126.15	ENSMUST00000110894.9	1169	6	209	118	0	0	multi-exon	FALSE	canonical	3	5160	junction_2	168.161113221815	92056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGAACTCTTTGCTGT	1047	False	NA	4	True	AATAAA	-15	NA	76082741	76085737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
ENSMUSG00000060126.15_76082772_76085738_1	chr14	+	813	6	FSM	ENSMUSG00000060126.15	ENSMUST00000110894.9	1169	6	239	117	0	1	multi-exon	FALSE	canonical	3	5160	junction_2	168.161113221815	92133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGAACTCTTTGCTGTG	1077	False	NA	5	True	AATAAA	-16	NA	76082771	76085738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
ENSMUSG00000060147.16_34101910_34119835_1	chr13	-	1347	7	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_6	142.613697331872	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8603	False	NA	-7	True	AATAAA	-19	NA	34119835	34101909	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119749
ENSMUSG00000060147.16_34101910_34119961_1	chr13	-	1494	8	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	178.155171988136	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8477	False	NA	-7	True	AATAAA	-19	NA	34119961	34101909	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119601_34119778_34119904
ENSMUSG00000060147.16_34101910_34119961_2	chr13	-	1540	8	FSM	ENSMUSG00000060147.16	ENSMUST00000167163.8	1654	8	105	9	0	0	multi-exon	FALSE	canonical	0	0	junction_6	180.800939134278	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8477	False	NA	-7	True	AATAAA	-19	NA	34119961	34101909	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119555_34119778_34119904
ENSMUSG00000060149.8_17171814_17192790_1	chr17	+	449	4	FSM	ENSMUSG00000060149.8	ENSMUST00000232328.2	1598	4	0	1149	0	-1149	multi-exon	FALSE	canonical	3	27	junction_1	5.55777733351102	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGCATACTGGATCCTTT	NA	False	NA	NA	False	NA	NA	NA	17171813	17192790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_17171971_17191161_17191289_17191432_17191494_17192686
ENSMUSG00000060149.8_17171814_17194419_1	chr17	+	2078	4	FSM	ENSMUSG00000060149.8	ENSMUST00000232328.2	1598	4	0	-480	0	0	multi-exon	FALSE	canonical	3	27	junction_1	5.55777733351102	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCCAAGTGGCCTACTC	NA	False	NA	24	True	NA	NA	NA	17171813	17194419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_17171971_17191161_17191289_17191432_17191494_17192686
ENSMUSG00000060152.15_115376106_115379031_1	chr5	+	734	5	ISM	ENSMUSG00000060152.15	ENSMUST00000081497.13	1025	6	2211	19	0	6	3prime_fragment	FALSE	canonical	3	535	junction_1	139.257629952545	1833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTTGCCTTGAATGT	NA	False	NA	17	True	AATAAA	-19	NA	115376105	115379031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_115376129_115376193_115376337_115378220_115378371_115378531_115378616_115378697
ENSMUSG00000060180.13_67235629_67262414_1	chr11	+	4011	25	ISM	ENSMUSG00000060180.13	ENSMUST00000081911.12	5817	39	17700	-86	17700	2	3prime_fragment	FALSE	canonical	3	52	junction_14	14.9210887300119	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGCTCTGCTGTGTTTG	NA	False	NA	24	True	AATAAA	-20	NA	67235628	67262414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
ENSMUSG00000060216.16_70323471_70331501_1	chr11	+	1737	15	FSM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	-8	119	0	1	multi-exon	FALSE	canonical	3	204	junction_13	22.0579015413562	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTATGTGTTCTGT	NA	False	NA	15	True	AATAAA	-15	NA	70323470	70331501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ENSMUSG00000060227.16_121765319_121766388_1	chr2	+	1042	2	NNC	ENSMUSG00000060227.16	novel	3475	8	NA	NA	36031	0	at_least_one_novel_splicesite	TRUE	non_canonical	3	134	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACAGTTTTGATTATAT	NA	False	NA	8	True	AATAAA	-17	NA	121765318	121766388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_121765678_121765705
ENSMUSG00000060279.15_44549809_44550499_1	chr7	-	520	2	ISM	ENSMUSG00000060279.15	ENSMUST00000209067.2	693	3	619	-331	619	0	3prime_fragment	FALSE	canonical	3	770	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACCCCAGCTATTGA	3429	False	NA	-14	True	AATAAA	-13	NA	44550499	44549808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_44550240_44550410
ENSMUSG00000060288.14_119157207_119177696_1	chr4	-	969	10	NNC	ENSMUSG00000060288.14	novel	800	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	168.863521486699	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9629	False	NA	-3	True	AATAAA	-19	NA	119177696	119157206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_119157381_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177267_119177365_119177431_119177605
ENSMUSG00000060288.14_119157207_119177696_2	chr4	-	746	9	NNC	ENSMUSG00000060288.14	novel	800	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	161.871669849915	2691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9629	False	NA	-3	True	AATAAA	-19	NA	119177696	119157206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_119157381_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177348_119177431_119177605
ENSMUSG00000060314.14_140389602_140402045_1	chr7	-	2896	4	NNC	ENSMUSG00000060314.14	novel	3851	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.6645020732269	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCACATTGGAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	140402045	140389601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_140390085_140391039_140393228_140398500_140398628_140401947
ENSMUSG00000060373.16_52311002_52341456_1	chr14	-	2590	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	8	-907	0	0	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	6125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAGAAGCTGGTGTGT	8754	False	NA	-38	True	AATAAA	-19	NA	52341456	52311001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUSG00000060373.16_52311002_52341456_2	chr14	-	2564	8	NIC	ENSMUSG00000060373.16	novel	2617	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1620	junction_2	930.149406475834	5341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAGAAGCTGGTGTGT	8754	False	NA	-38	True	AATAAA	-19	NA	52341456	52311001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ENSMUSG00000060373.16_52311002_52341456_3	chr14	-	2585	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	-30	-1254	0	0	multi-exon	FALSE	canonical	3	1725	junction_7	903.44372897739	6282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAGAAGCTGGTGTGT	8754	False	NA	-38	True	AATAAA	-19	NA	52341456	52311001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ENSMUSG00000060373.16_52311909_52341456_1	chr14	-	1743	9	FSM	ENSMUSG00000060373.16	ENSMUST00000111610.12	2847	9	29	1075	0	0	multi-exon	FALSE	canonical	3	714	junction_5	1135.23408929612	5793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	8754	False	NA	-17	True	AATAAA	-21	NA	52341456	52311908	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUSG00000060373.16_52311909_52341456_2	chr14	-	1657	8	NIC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1620	junction_2	930.149406475834	4738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	8754	False	NA	-17	True	AATAAA	-21	NA	52341456	52311908	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ENSMUSG00000060373.16_52312259_52341456_1	chr14	-	1372	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228198.2	2498	9	0	1126	0	0	multi-exon	FALSE	canonical	3	714	junction_5	1148.92795139643	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAACTGTCTCCAAAAT	8754	False	NA	39	True	AATAAA	-15	NA	52341456	52312258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUSG00000060373.16_52312259_52341456_2	chr14	-	1307	8	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1620	junction_2	930.149406475834	2876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAACTGTCTCCAAAAT	8754	False	NA	39	True	AATAAA	-15	NA	52341456	52312258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ENSMUSG00000060373.16_52312259_52341456_3	chr14	-	1393	9	FSM	ENSMUSG00000060373.16	ENSMUST00000111610.12	2847	9	29	1425	0	0	multi-exon	FALSE	canonical	3	714	junction_5	1135.23408929612	3323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAACTGTCTCCAAAAT	8754	False	NA	39	True	AATAAA	-15	NA	52341456	52312258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUSG00000060373.16_52312259_52341456_4	chr14	-	1333	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	8	350	0	0	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	3017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAACTGTCTCCAAAAT	8754	False	NA	39	True	AATAAA	-15	NA	52341456	52312258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUSG00000060397.7_12615104_12625768_1	chr7	+	2253	4	FSM	ENSMUSG00000060397.7	ENSMUST00000144578.2	3834	4	0	1581	0	0	multi-exon	FALSE	canonical	2	3	junction_3	3.55902608401044	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGTTGTGTGTAATTT	NA	False	NA	NA	False	AATAAA	-36	NA	12615103	12625768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_12615288_12618569_12618697_12618949_12619046_12623922
ENSMUSG00000060419.9_129205141_129205636_1	chr5	-	445	2	Genic_Genomic	ENSMUSG00000060419.9	novel	441	1	NA	NA	-55	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATCTCAAGGATCGGGG	NA	False	NA	NA	False	NA	NA	NA	129205636	129205140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_129205432_129205482
ENSMUSG00000060419.9_129205141_129205636_2	chr5	-	394	2	Genic_Genomic	ENSMUSG00000060419.9	novel	441	1	NA	NA	-55	0	multi-exon	FALSE	non_canonical	1	14	junction_1	0	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATCTCAAGGATCGGGG	NA	False	NA	NA	False	NA	NA	NA	129205636	129205140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_129205432_129205533
ENSMUSG00000060427.16_70063310_70078199_1	chr8	-	2457	5	FSM	ENSMUSG00000060427.16	ENSMUST00000121886.8	2259	5	0	-198	0	198	multi-exon	FALSE	canonical	3	55	junction_4	33.7083075813663	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTTAGTGCCTCCCAT	NA	False	NA	-30	True	NA	NA	NA	70078199	70063309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70078085
ENSMUSG00000060427.16_70063508_70077826_1	chr8	-	2244	5	NNC	ENSMUSG00000060427.16	novel	2259	5	NA	NA	370	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	46.3215662515852	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTATTACTTAGTACTC	NA	False	NA	-6	True	AATAAA	-23	NA	70077826	70063507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70077727
ENSMUSG00000060450.15_38429723_38449925_2	chr18	+	2191	11	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	0	58	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	89.3559734992575	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAGTTAAAAAGTAAATA	961	False	NA	NA	False	ATTAAA	-23	NA	38429722	38449925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_38429852_38430552_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUSG00000060450.15_38429723_38449925_3	chr18	+	2039	10	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	0	58	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	92.9832057051696	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAGTTAAAAAGTAAATA	961	False	NA	NA	False	ATTAAA	-23	NA	38429722	38449925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_38429852_38430552_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUSG00000060450.15_38429723_38449925_5	chr18	+	2028	9	FSM	ENSMUSG00000060450.15	ENSMUST00000072376.13	3040	9	35	977	0	58	multi-exon	FALSE	canonical	3	120	junction_3	53.7248487666555	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAGTTAAAAAGTAAATA	961	False	NA	NA	False	ATTAAA	-23	NA	38429722	38449925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUSG00000060450.15_38429723_38449925_7	chr18	+	1876	8	FSM	ENSMUSG00000060450.15	ENSMUST00000236649.2	2822	8	-24	970	0	58	multi-exon	FALSE	canonical	3	128	junction_3	44.1310663864829	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAGTTAAAAAGTAAATA	961	False	NA	NA	False	ATTAAA	-23	NA	38429722	38449925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUSG00000060450.15_38429723_38450897_1	chr18	+	3163	11	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	89.3559734992575	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTAGACACGGTGTCC	961	False	NA	18	True	AATAAA	-23	NA	38429722	38450897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_38429852_38430552_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUSG00000060450.15_38429723_38450897_4	chr18	+	1678	4	FSM	ENSMUSG00000060450.15	ENSMUST00000237416.2	618	4	-30	-1030	0	2	multi-exon	FALSE	canonical	0	0	junction_3	98.2694707876708	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTAGACACGGTGTCC	961	False	NA	18	True	AATAAA	-23	NA	38429722	38450897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_38429852_38432806_38432980_38433481_38433538_38449577
ENSMUSG00000060450.15_38429829_38450897_1	chr18	+	1572	4	FSM	ENSMUSG00000060450.15	ENSMUST00000237416.2	618	4	76	-1030	0	2	multi-exon	FALSE	canonical	0	0	junction_3	98.2694707876708	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTAGACACGGTGTCC	1067	False	NA	18	True	AATAAA	-23	NA	38429828	38450897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_38429852_38432806_38432980_38433481_38433538_38449577
ENSMUSG00000060461.6_78274334_78275304_1	chr9	-	464	3	FSM	ENSMUSG00000060461.6	ENSMUST00000071991.6	619	3	155	0	155	0	multi-exon	FALSE	canonical	3	178157	junction_1	1580.5	35641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275304	78274333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_78274577_78275002_78275186_78275266
ENSMUSG00000060461.6_78274334_78275459_1	chr9	-	615	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89078.5	545135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275459	78274333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_78274577_78275002_78275178_78275262
ENSMUSG00000060475.14_13185686_13213056_1	chr17	-	1975	8	NIC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	239.599069876563	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13213056	13185685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13212949
ENSMUSG00000060475.14_13193155_13213056_1	chr17	-	1595	6	FSM	ENSMUSG00000060475.14	ENSMUST00000233867.2	446	6	0	-1149	0	-716	multi-exon	FALSE	canonical	3	14	junction_5	266.82773469038	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGGTTTTTTTTAATT	NA	False	NA	NA	False	ATTAAA	-18	NA	13213056	13193154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13212949
ENSMUSG00000060510.15_20410972_20432713_1	chr9	-	1675	9	FSM	ENSMUSG00000060510.15	ENSMUST00000174462.8	6283	9	0	4608	0	-611	multi-exon	FALSE	canonical	3	20	junction_8	12.7156399760295	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATGTGGGAAAGCCTTC	NA	False	NA	NA	False	NA	NA	NA	20432713	20410971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432639
ENSMUSG00000060548.14_61233985_61275436_1	chr14	-	676	5	ISM	ENSMUSG00000060548.14	ENSMUST00000225730.2	744	6	-96	22014	-37	-22014	5prime_fragment	FALSE	canonical	3	37	junction_4	19.6532440070335	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGTCTAGAAAGCCCT	NA	False	NA	NA	False	NA	NA	NA	61275436	61233984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_-_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61275298
ENSMUSG00000060586.12_34524900_34535174_2	chr17	+	1136	6	FSM	ENSMUSG00000060586.12	ENSMUST00000235530.2	1669	6	59	474	0	1	multi-exon	FALSE	canonical	3	177	junction_2	11.7064085013295	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTTCATAGAGTTTCAA	NA	False	NA	13	True	AATAAA	-17	NA	34524899	34535174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34525022_34528564_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
ENSMUSG00000060586.12_34533512_34535174_1	chr17	+	509	4	NNC	ENSMUSG00000060586.12	novel	798	3	NA	NA	4963	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	88.8831942620326	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTTCATAGAGTTTCAA	NA	False	NA	13	True	AATAAA	-17	NA	34533511	34535174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_34533559_34534016_34534128_34534529_34534554_34534847
ENSMUSG00000060591.10_140534921_140535900_1	chr7	-	484	2	FSM	ENSMUSG00000060591.10	ENSMUST00000081649.10	655	2	0	171	0	-171	multi-exon	FALSE	canonical	3	9574	junction_1	0	3420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACCCCATTCTGGATTC	NA	False	NA	NA	False	NA	NA	NA	140535900	140534920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140535087_140535582
ENSMUSG00000060675.14_7534824_7563154_1	chr19	+	767	5	FSM	ENSMUSG00000060675.14	ENSMUST00000025925.11	3523	5	0	2756	0	-922	multi-exon	TRUE	canonical	3	141	junction_1	31.8825971338597	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGAGGATACTGCAG	NA	False	NA	13	True	AATAAA	-15	NA	7534823	7563154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_7534930_7535296_7535361_7552301_7552405_7556318_7556588_7562929
ENSMUSG00000060675.14_7534824_7563154_2	chr19	+	1005	5	FSM	ENSMUSG00000060675.14	ENSMUST00000136756.2	1901	5	-26	922	0	-922	multi-exon	FALSE	canonical	3	44	junction_1	71.8135606971274	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGAGGATACTGCAG	NA	False	NA	13	True	AATAAA	-15	NA	7534823	7563154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_7535168_7535296_7535361_7552301_7552405_7556318_7556588_7562929
ENSMUSG00000060675.14_7534824_7563154_3	chr19	+	1134	4	NIC	ENSMUSG00000060675.14	novel	3523	5	NA	NA	0	-922	intron_retention	FALSE	canonical	3	191	junction_2	16.9771087709958	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGAGGATACTGCAG	NA	False	NA	13	True	AATAAA	-15	NA	7534823	7563154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_7535361_7552301_7552405_7556318_7556588_7562929
ENSMUSG00000060675.14_7539343_7563154_1	chr19	+	653	4	NNC	ENSMUSG00000060675.14	novel	3048	4	NA	NA	4493	-922	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	99.569071503153	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGAGGATACTGCAG	210	False	NA	13	True	AATAAA	-15	NA	7539342	7563154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_7539399_7552301_7552405_7556318_7556588_7562929
ENSMUSG00000060679.15_42890436_42944843_1	chr1	+	1371	11	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	210.043923977819	1608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	False	NA	15	True	AATAAA	-17	NA	42890435	42944843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926871_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ENSMUSG00000060679.15_42890436_42944843_2	chr1	+	1367	11	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	209.682355003944	2164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	False	NA	15	True	AATAAA	-17	NA	42890435	42944843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937608_42937769_42938600_42938710_42942454_42942625_42944564
ENSMUSG00000060679.15_42890436_42944843_3	chr1	+	1361	10	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	221.393956445557	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	False	NA	15	True	AATAAA	-17	NA	42890435	42944843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_42890587_42901628_42901809_42918914_42918994_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ENSMUSG00000060679.15_42890436_42944843_4	chr1	+	1369	11	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	207.97281072294	2791	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	False	NA	15	True	AATAAA	-17	NA	42890435	42944843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_42890580_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ENSMUSG00000060679.15_42890436_42944843_5	chr1	+	1367	11	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	207.97281072294	2205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	False	NA	15	True	AATAAA	-17	NA	42890435	42944843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_42890587_42901637_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ENSMUSG00000060703.13_60082337_60114489_1	chr2	-	984	5	FSM	ENSMUSG00000060703.13	ENSMUST00000028356.9	1257	5	273	0	273	0	multi-exon	FALSE	canonical	2	4	junction_1	33.0189339621981	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTGGTCTTCTT	4275	False	NA	-4	True	AATAAA	-15	NA	60114489	60082336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_60082836_60087376_60087548_60088226_60088344_60102445_60102557_60114403
ENSMUSG00000060703.13_60082337_60114489_2	chr2	-	1011	6	FSM	ENSMUSG00000060703.13	ENSMUST00000074606.11	1354	6	343	0	273	0	multi-exon	FALSE	canonical	3	68	junction_2	6.41872261435249	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTGGTCTTCTT	4275	False	NA	-4	True	AATAAA	-15	NA	60114489	60082336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_60082836_60085414_60085442_60087376_60087548_60088226_60088344_60102445_60102557_60114403
ENSMUSG00000060703.13_60082550_60114489_1	chr2	-	798	6	FSM	ENSMUSG00000060703.13	ENSMUST00000074606.11	1354	6	343	213	273	-213	multi-exon	FALSE	canonical	3	68	junction_2	6.41872261435249	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCCTTTTATGGTTATT	4275	False	NA	NA	False	TATAAA	-16	NA	60114489	60082549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_60082836_60085414_60085442_60087376_60087548_60088226_60088344_60102445_60102557_60114403
ENSMUSG00000060715.10_53197736_53226767_1	chr1	-	641	9	NNC	ENSMUSG00000060715.10	novel	646	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	14.6452850774575	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAGAATGGAATTGCTT	NA	False	NA	NA	False	AATAAA	-28	NA	53226767	53197735	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_53197948_53202384_53202428_53209396_53209420_53209546_53209618_53216928_53216987_53221001_53221055_53221653_53221704_53224373_53224450_53226712
ENSMUSG00000060739.9_97267492_97274381_1	chr13	-	1076	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	64	1560	0	0	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	5341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGGCATAACGGTTTA	NA	False	NA	NA	False	AATAAA	-28	NA	97274381	97267491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
ENSMUSG00000060743.13_180630130_180641122_1	chr1	-	1022	4	NNC	ENSMUSG00000060743.13	novel	888	4	NA	NA	-10	132	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	1268.98393300397	29752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTCTGGTCTTTATTA	NA	False	NA	NA	False	ATTAAA	-16	NA	180641122	180630129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_180630768_180637681_180637836_180639363_180639503_180641031
ENSMUSG00000060743.13_180630130_180641122_2	chr1	-	1033	4	NNC	ENSMUSG00000060743.13	novel	2841	4	NA	NA	-10	132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1201.87141112886	30083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTCTGGTCTTTATTA	NA	False	NA	NA	False	ATTAAA	-16	NA	180641122	180630129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_180630763_180637673_180637836_180639363_180639515_180641035
ENSMUSG00000060743.13_180630132_180637786_1	chr1	-	744	2	ISM	ENSMUSG00000060743.13	ENSMUST00000159789.2	481	4	3313	-564	3313	130	3prime_fragment	TRUE	canonical	3	2558	junction_1	0	2547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCTTCTGGTCTTTAT	NA	False	NA	NA	False	ATTAAA	-14	NA	180637786	180630131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_180630771_180637681
ENSMUSG00000060791.16_28136912_28145971_1	chr7	+	470	5	NIC	ENSMUSG00000060791.16	novel	477	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	188.931866025824	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACATGGTATCTGCAAAAT	1855	False	NA	NA	False	AATAAA	-26	NA	28136911	28145971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_28137000_28142644_28142695_28144277_28144361_28145341_28145416_28145796
ENSMUSG00000060798.8_40594916_40609047_1	chr3	+	1155	2	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	0	50157	0	1	5prime_fragment	FALSE	canonical	3	119	junction_1	0	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGCACTTGAGAACACC	NA	False	NA	2	True	AATAAA	-18	NA	40594915	40609047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_40595159_40608135
ENSMUSG00000060802.9_121978167_121983354_1	chr2	+	650	4	FSM	ENSMUSG00000060802.9	ENSMUST00000102476.5	860	4	0	210	0	-210	multi-exon	FALSE	canonical	3	168	junction_2	12.4721912892465	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTGATCATATGCCAAAC	NA	False	NA	NA	False	AATAAA	-18	NA	121978166	121983354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121978286_121981353_121981633_121982127_121982157_121983131
ENSMUSG00000060860.9_4795989_4797561_1	chr7	-	486	5	NIC	ENSMUSG00000060860.9	novel	1126	6	NA	NA	16557	1556	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	192337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGCGGCCGGAGACGGA	NA	False	NA	NA	False	NA	NA	NA	4797561	4795988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_4795998_4796319_4796409_4796501_4796626_4797062_4797182_4797416
ENSMUSG00000060904.15_88567231_88579066_1	chr10	+	889	6	FSM	ENSMUSG00000060904.15	ENSMUST00000116234.9	2080	6	301	890	301	-890	multi-exon	FALSE	canonical	3	1125	junction_1	68.5466264669531	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGAGAGGGTTAGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	88567230	88579066	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578884
ENSMUSG00000060904.15_88567231_88579237_1	chr10	+	1060	6	FSM	ENSMUSG00000060904.15	ENSMUST00000116234.9	2080	6	301	719	301	-719	multi-exon	FALSE	canonical	3	1125	junction_1	68.5466264669531	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGTTGCATCTTGTTT	NA	False	NA	37	True	ATTAAA	-39	NA	88567230	88579237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578884
ENSMUSG00000060904.15_88567231_88579956_1	chr10	+	1779	6	FSM	ENSMUSG00000060904.15	ENSMUST00000116234.9	2080	6	301	0	301	0	multi-exon	FALSE	canonical	3	1125	junction_1	68.5466264669531	3717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGATGTCTTTAGTGTCTT	NA	False	NA	14	True	AATAAA	-23	NA	88567230	88579956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578884
ENSMUSG00000060904.15_88577816_88579956_1	chr10	+	1208	2	NNC	ENSMUSG00000060904.15	novel	2080	6	NA	NA	10076	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGATGTCTTTAGTGTCTT	7222	False	NA	14	True	AATAAA	-23	NA	88577815	88579956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_88577952_88578884
ENSMUSG00000060923.6_30455991_30599406_2	chr11	-	688	3	NNC	ENSMUSG00000060923.6	novel	863	4	NA	NA	181	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.5	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTACTGTTGCCTA	NA	False	NA	NA	False	AATAAA	-15	NA	30599406	30455990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_30456440_30582207_30582341_30599300
ENSMUSG00000060935.7_84938607_84953450_1	chr10	+	3501	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	116	-1	0	1	multi-exon	FALSE	canonical	3	175	junction_1	7	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAATGTTTCATAAAGA	NA	False	NA	18	True	AATAAA	-18	NA	84938606	84953450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_84938862_84946662_84946730_84950271
ENSMUSG00000060950.13_111644550_111649573_1	chr12	+	1218	4	NIC	ENSMUSG00000060950.13	novel	2131	4	NA	NA	0	-763	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	70.7153920067383	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCCTGGGTTTTGAGA	NA	False	NA	11	True	NA	NA	NA	111644549	111649573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_111644596_111645036_111645397_111647235_111647503_111649028
ENSMUSG00000060950.13_111644550_111650336_1	chr12	+	1981	4	NIC	ENSMUSG00000060950.13	novel	2131	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	70.7153920067383	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	5	True	AATAAA	-17	NA	111644549	111650336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_111644596_111645036_111645397_111647235_111647503_111649028
ENSMUSG00000060992.10_103181328_103208131_2	chr15	+	1521	9	FSM	ENSMUSG00000060992.10	ENSMUST00000100162.5	1676	9	-9	164	0	-161	multi-exon	FALSE	canonical	3	554	junction_1	173.470458580128	2344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGAAAATGACTTAGGAAA	NA	False	NA	NA	False	NA	NA	NA	103181327	103208131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ENSMUSG00000060992.10_103181328_103208295_3	chr15	+	1674	9	NNC	ENSMUSG00000060992.10	novel	1676	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	359.006941959344	3518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTGTGATGGCTCTGT	NA	False	NA	32	True	AATAAA	-20	NA	103181327	103208295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205171_103205213_103206313_103206353_103207119
ENSMUSG00000061046.10_26001799_26004556_1	chr17	-	1602	8	ISM	ENSMUSG00000061046.10	ENSMUST00000140738.8	1194	9	-42	2982	0	0	5prime_fragment	FALSE	canonical	3	40	junction_3	8.60232526704263	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTGTGGTACCAGACAC	4344	False	NA	-37	True	AATAAA	-12	NA	26004556	26001798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977_26004169_26004401
ENSMUSG00000061099.13_30429004_30455559_1	chr7	-	1123	7	NIC	ENSMUSG00000061099.13	novel	675	6	NA	NA	-12453	196	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCACGCGACGTACCAGG	1857	False	NA	NA	False	NA	NA	NA	30455559	30429003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_30429280_30431838_30432187_30434128_30434194_30435240_30435388_30454233_30454306_30454426_30454472_30455389
ENSMUSG00000061119.8_92524508_92582405_1	chr7	+	1533	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	48	1386	0	-817	multi-exon	FALSE	canonical	3	95	junction_2	10.1665812837945	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTGTTTTCTTTTA	NA	False	NA	NA	False	AATGAA	-18	NA	92524507	92582405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ENSMUSG00000061119.8_92524508_92583222_1	chr7	+	2350	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	48	569	0	0	multi-exon	FALSE	canonical	3	95	junction_2	10.1665812837945	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTGAAAAAGTAGAATG	NA	False	NA	102	True	AATAAA	-24	NA	92524507	92583222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ENSMUSG00000061130.14_85301773_85322119_1	chr17	+	1609	5	ISM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	36346	0	665	0	3prime_fragment	FALSE	canonical	3	718	junction_4	374.08855903382	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCACACTTTGGCTCAG	NA	False	NA	6	True	AATAAA	-22	NA	85301772	85322119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
ENSMUSG00000061207.12_35042971_35055903_1	chr17	-	952	6	NIC	ENSMUSG00000061207.12	novel	1120	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	31.928670501604	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCTTTCTGTGTCCTTT	5591	False	NA	-6	True	AATAAA	-14	NA	35055903	35042970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_35043301_35043726_35043825_35050988_35051129_35051421_35051518_35055405_35055543_35055752
ENSMUSG00000061232.17_34215007_34219258_1	chr17	-	1537	7	NNC	ENSMUSG00000061232.17	novel	1570	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.3355262208798	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGAATCTGGGTCACT	NA	False	NA	-20	True	AATAAA	-16	NA	34219258	34215006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_34215451_34215589_34215629_34215990_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ENSMUSG00000061232.17_34215007_34219258_2	chr17	-	1564	7	NNC	ENSMUSG00000061232.17	novel	1619	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.862399097611	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGAATCTGGGTCACT	NA	False	NA	-20	True	AATAAA	-16	NA	34219258	34215006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_34215478_34215589_34215629_34215990_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ENSMUSG00000061273.4_55630872_55643302_1	chrX	-	4107	4	FSM	ENSMUSG00000061273.4	ENSMUST00000059899.3	4234	4	127	0	127	0	multi-exon	FALSE	canonical	3	129	junction_2	4.64279609239471	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTGTTTGGTAGTGG	NA	False	NA	-7	True	AATAAA	-14	NA	55643302	55630871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_55634664_55636437_55636542_55640749_55640803_55643144
ENSMUSG00000061273.4_55632638_55643302_1	chrX	-	2341	4	FSM	ENSMUSG00000061273.4	ENSMUST00000059899.3	4234	4	127	1766	127	-1766	multi-exon	FALSE	canonical	3	129	junction_2	4.64279609239471	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCGAACCCAAGGACTAA	NA	False	NA	NA	False	NA	NA	NA	55643302	55632637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_55634664_55636437_55636542_55640749_55640803_55643144
ENSMUSG00000061306.17_119995278_119997346_1	chr11	-	1672	2	FSM	ENSMUSG00000061306.17	ENSMUST00000146641.2	971	2	468	-1169	468	0	multi-exon	FALSE	canonical	3	392	junction_1	0	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	NA	False	NA	-12	True	AATAAA	-12	NA	119997346	119995277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_119996863_119997259
ENSMUSG00000061306.17_119995278_120042148_1	chr11	-	4038	16	FSM	ENSMUSG00000061306.17	ENSMUST00000045402.14	4554	16	24	492	0	0	multi-exon	FALSE	canonical	3	392	junction_1	66.2227218474814	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5020	False	NA	-12	True	AATAAA	-12	NA	120042148	119995277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ENSMUSG00000061315.15_127871504_127884400_1	chr10	+	723	8	FSM	ENSMUSG00000061315.15	ENSMUST00000073868.9	885	8	60	102	0	-102	multi-exon	FALSE	canonical	3	9741	junction_1	845.476607528293	19975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTCCCCCCTTTTTGGT	4972	False	NA	NA	False	NA	NA	NA	127871503	127884400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ENSMUSG00000061315.15_127871504_127884506_1	chr10	+	592	7	NNC	ENSMUSG00000061315.15	novel	6745	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4258.77081901444	10046	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGCTAGATCTTTTCC	4972	False	NA	4	True	AATAAA	-28	NA	127871503	127884506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882650_127883931_127883997_127884113_127884237_127884361
ENSMUSG00000061315.15_127871504_127884506_2	chr10	+	583	7	NNC	ENSMUSG00000061315.15	novel	6745	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4258.77081901444	9575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGCTAGATCTTTTCC	4972	False	NA	4	True	AATAAA	-28	NA	127871503	127884506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882635_127883925_127883997_127884113_127884237_127884361
ENSMUSG00000061315.15_127871504_127884506_3	chr10	+	696	8	NNC	ENSMUSG00000061315.15	novel	6745	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4013.31572927637	18829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGCTAGATCTTTTCC	4972	False	NA	4	True	AATAAA	-28	NA	127871503	127884506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883605_127883931_127883997_127884113_127884237_127884361
ENSMUSG00000061315.15_127871504_127884506_4	chr10	+	822	8	NNC	ENSMUSG00000061315.15	novel	6745	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3867.5424037621	83640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGCTAGATCTTTTCC	4972	False	NA	4	True	AATAAA	-28	NA	127871503	127884506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127871553_127872357_127872430_127882036_127882123_127882604_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ENSMUSG00000061356.14_65862927_65885893_1	chr14	+	1145	8	NNC	ENSMUSG00000061356.14	novel	2745	19	NA	NA	20211	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	13.2711133285641	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAACTGCTACATCATTA	6427	False	NA	NA	False	AATAAA	-35	NA	65862926	65885893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_65862999_65872451_65872617_65875999_65876158_65877431_65877571_65878687_65878797_65879306_65879444_65882458_65882550_65885619
ENSMUSG00000061360.9_81749518_81756112_1	chr15	-	241	2	NNC	ENSMUSG00000061360.9	novel	1663	4	NA	NA	0	152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAACGTCTACTTTTAG	NA	False	NA	-4	True	AATAAA	-22	NA	81756112	81749517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81749693_81756046
ENSMUSG00000061360.9_81749518_81756112_2	chr15	-	866	4	FSM	ENSMUSG00000061360.9	ENSMUST00000023117.10	1663	4	0	797	0	152	multi-exon	FALSE	canonical	3	1228	junction_3	69.0426599204354	5976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAACGTCTACTTTTAG	NA	False	NA	-4	True	AATAAA	-22	NA	81756112	81749517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81750094_81754532_81754700_81755366_81755391_81756013
ENSMUSG00000061360.9_81749518_81756112_3	chr15	-	859	3	NNC	ENSMUSG00000061360.9	novel	1663	4	NA	NA	0	152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	697	5860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAACGTCTACTTTTAG	NA	False	NA	-4	True	AATAAA	-22	NA	81756112	81749517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_81750094_81754532_81754717_81756013
ENSMUSG00000061451.14_5120887_5122538_1	chr19	-	596	3	NNC	ENSMUSG00000061451.14	novel	633	3	NA	NA	-378	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	0.5	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTATGGACTTTCTCCC	NA	False	NA	-32	True	AATAAA	-8	NA	5122538	5120886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_5121140_5121682_5121923_5122435
ENSMUSG00000061451.14_5120887_5122816_1	chr19	-	613	3	NIC	ENSMUSG00000061451.14	novel	633	3	NA	NA	-656	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	0	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTATGGACTTTCTCCC	NA	False	NA	-32	True	AATAAA	-8	NA	5122816	5120886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_5121140_5121682_5121923_5122696
ENSMUSG00000061455.14_48124926_48182231_1	chr4	+	1494	8	FSM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	0	4276	0	0	multi-exon	FALSE	canonical	3	28	junction_1	8.24621125123532	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTCTTCATTGTGACAT	5	True	NA	13	True	TATAAA	-29	NA	48124925	48182231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_48124959_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
ENSMUSG00000061455.14_48124926_48183118_1	chr4	+	2381	8	FSM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	0	3389	0	887	multi-exon	FALSE	canonical	3	28	junction_1	8.24621125123532	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTATTTATTTCTTATC	5	True	NA	17	True	ATTAAA	-14	NA	48124925	48183118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_48124959_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
ENSMUSG00000061458.10_17398459_17480096_1	chr12	+	1023	11	NNC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	80.6198486726439	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATTTGTTTAGCTTA	NA	False	NA	14	True	AATAAA	-17	NA	17398458	17480096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418343_17479879
ENSMUSG00000061461.12_53424519_53435882_1	chr5	+	878	3	NNC	ENSMUSG00000061461.12	novel	931	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	162.5	2069	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGGTGTGTACTGTT	3446	False	NA	13	True	ATTAAA	-14	NA	53424518	53435882	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_53424701_53434489_53434542_53435238
ENSMUSG00000061474.12_100872463_100881096_1	chr13	-	624	4	FSM	ENSMUSG00000061474.12	ENSMUST00000078573.5	571	4	69	-122	0	0	multi-exon	FALSE	canonical	3	151	junction_2	492.52884856287	2876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-1	NA	100881096	100872462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100872782_100875521_100875704_100877675_100877740_100881037
ENSMUSG00000061474.12_100872463_100881584_1	chr13	-	917	4	NNC	ENSMUSG00000061474.12	novel	701	4	NA	NA	-417	0	at_least_one_novel_splicesite	FALSE	canonical	3	219	junction_3	475.847547948804	2031	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-1	NA	100881584	100872462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_100872782_100875521_100875710_100877675_100877740_100881238
ENSMUSG00000061474.12_100872463_100881584_2	chr13	-	1009	5	NNC	ENSMUSG00000061474.12	novel	701	4	NA	NA	-417	0	at_least_one_novel_splicesite	FALSE	canonical	3	201	junction_4	428.198843996571	6864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-1	NA	100881584	100872462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037_100881130_100881238
ENSMUSG00000061474.12_100872637_100881096_1	chr13	-	456	4	FSM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	71	174	0	0	multi-exon	FALSE	canonical	3	1082	junction_3	81.5693297481079	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTCCAGGTGGTCACTT	NA	False	NA	NA	False	AATAAA	-26	NA	100881096	100872636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037
ENSMUSG00000061474.12_100872637_100881167_1	chr13	-	339	3	NIC	ENSMUSG00000061474.12	novel	701	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	70	junction_1	506	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTCCAGGTGGTCACTT	NA	False	NA	NA	False	AATAAA	-26	NA	100881167	100872636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_100872782_100877675_100877740_100881037
ENSMUSG00000061474.12_100872637_100881584_1	chr13	-	835	5	NNC	ENSMUSG00000061474.12	novel	469	5	NA	NA	-417	0	at_least_one_novel_splicesite	FALSE	canonical	3	201	junction_4	428.198843996571	3327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTCCAGGTGGTCACTT	NA	False	NA	NA	False	AATAAA	-26	NA	100881584	100872636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037_100881130_100881238
ENSMUSG00000061474.12_100872637_100881584_2	chr13	-	743	4	NNC	ENSMUSG00000061474.12	novel	701	4	NA	NA	-417	0	at_least_one_novel_splicesite	FALSE	canonical	3	219	junction_3	475.847547948804	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTCCAGGTGGTCACTT	NA	False	NA	NA	False	AATAAA	-26	NA	100881584	100872636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_100872782_100875521_100875710_100877675_100877740_100881238
ENSMUSG00000061477.5_28681082_28685880_1	chr12	-	653	7	FSM	ENSMUSG00000061477.5	ENSMUST00000074267.5	954	7	72	229	-3	0	multi-exon	FALSE	canonical	3	10789	junction_4	2567.89392736971	185073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685880	28681081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854
ENSMUSG00000061477.5_28681082_28685952_1	chr12	-	725	7	FSM	ENSMUSG00000061477.5	ENSMUST00000074267.5	954	7	0	229	0	0	multi-exon	FALSE	canonical	3	10789	junction_4	2567.89392736971	187541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685952	28681081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854
ENSMUSG00000061479.16_26886432_26895449_1	chr7	-	1115	7	FSM	ENSMUSG00000061479.16	ENSMUST00000122202.8	1336	7	221	0	0	0	multi-exon	FALSE	canonical	3	597	junction_6	627.600567417065	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-26	NA	26895449	26886431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895418
ENSMUSG00000061479.16_26886432_26895578_1	chr7	-	1241	7	NNC	ENSMUSG00000061479.16	novel	1365	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	846.265406884205	1116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-26	NA	26895578	26886431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_26886790_26888290_26888380_26888783_26888958_26891034_26891206_26892294_26892468_26894868_26894982_26895415
ENSMUSG00000061479.16_26886432_26895578_2	chr7	-	1244	7	FSM	ENSMUSG00000061479.16	ENSMUST00000122202.8	1336	7	92	0	0	0	multi-exon	FALSE	canonical	3	597	junction_6	627.600567417065	2980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-26	NA	26895578	26886431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895418
ENSMUSG00000061518.12_36730691_36732469_2	chr1	+	421	4	NNC	ENSMUSG00000061518.12	novel	865	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3383.70989694251	1537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTAGTCTTATGTCTA	NA	False	NA	25	True	AATAAA	-30	NA	36730690	36732469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_36730746_36731291_36731366_36731531_36731632_36732277
ENSMUSG00000061518.12_36730691_36732469_3	chr1	+	440	4	NNC	ENSMUSG00000061518.12	novel	865	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3424.44607037239	2100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTAGTCTTATGTCTA	NA	False	NA	25	True	AATAAA	-30	NA	36730690	36732469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_36730771_36731291_36731366_36731531_36731632_36732283
ENSMUSG00000061518.12_36730691_36732617_1	chr1	+	594	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	126	145	0	-145	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	11233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGCTGTTATTTGTT	NA	False	NA	9	True	TTTAAA	-16	NA	36730690	36732617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
ENSMUSG00000061518.12_36730723_36732469_1	chr1	+	414	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	158	293	0	2	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	3703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTAGTCTTATGTCTA	NA	False	NA	25	True	AATAAA	-30	NA	36730722	36732469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
ENSMUSG00000061544.14_21949680_21967950_1	chr17	+	1020	2	NNC	ENSMUSG00000061544.14	novel	4315	6	NA	NA	-96	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGACTTGTATCATAGT	NA	False	NA	12	True	AATAAA	-26	NA	21949679	21967950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_21949752_21967002
ENSMUSG00000061544.14_21949776_21966087_1	chr17	+	2685	6	FSM	ENSMUSG00000061544.14	ENSMUST00000182827.8	640	6	0	-2045	0	-1862	multi-exon	FALSE	canonical	3	170	junction_1	15.5254629560603	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAATGAAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-28	NA	21949775	21966087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ENSMUSG00000061559.16_54624443_54641766_1	chr9	-	1253	11	NIC	ENSMUSG00000061559.16	novel	1162	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_9	332.004593341719	3295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTGTGAACGTGCT	5458	False	NA	-3	True	AATAAA	-19	NA	54641766	54624442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637941_54638670_54638722_54641652
ENSMUSG00000061607.16_36152568_36159495_1	chr17	+	1967	5	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	0	-2016	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	42.3283297567953	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAGGAAGGGAGAGAGAAG	9390	False	NA	NA	False	NA	NA	NA	36152567	36159495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214
ENSMUSG00000061607.16_36152568_36163806_1	chr17	+	3443	10	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	0	2295	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	41.0094839979459	421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCGGGCCACTCGGGGCA	9390	False	NA	NA	False	NA	NA	NA	36152567	36163806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306
ENSMUSG00000061607.16_36152568_36163806_2	chr17	+	2868	10	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	0	2295	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_5	45.8478428212062	196	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCGGGCCACTCGGGGCA	9390	False	NA	NA	False	NA	NA	NA	36152567	36163806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306
ENSMUSG00000061607.16_36152568_36163890_1	chr17	+	3035	10	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	0	2379	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	46.5522406669229	280	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCACCTCCATAGAACAAC	9390	False	NA	NA	False	NA	NA	NA	36152567	36163890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306
ENSMUSG00000061607.16_36152568_36164352_3	chr17	+	3989	10	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	0	2841	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	41.0094839979459	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTCCAGCCTTTCACTT	9390	False	NA	NA	False	NA	NA	NA	36152567	36164352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306
ENSMUSG00000061613.14_31866055_31877712_1	chr17	-	867	9	NNC	ENSMUSG00000061613.14	novel	1046	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2066.5670053255	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877712	31866054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_31866246_31866270_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ENSMUSG00000061613.14_31866055_31877712_2	chr17	-	892	8	FSM	ENSMUSG00000061613.14	ENSMUST00000014684.6	1046	8	154	0	0	0	multi-exon	FALSE	canonical	3	4626	junction_6	706.208473585007	6962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877712	31866054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ENSMUSG00000061613.14_31866055_31877712_3	chr17	-	886	8	NNC	ENSMUSG00000061613.14	novel	1046	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2186.81678076904	6283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877712	31866054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_31866324_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ENSMUSG00000061613.14_31866055_31877712_4	chr17	-	720	8	NNC	ENSMUSG00000061613.14	novel	923	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2828.39093219203	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877712	31866054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_31866179_31866997_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31871475_31871543_31873952_31874041_31877626
ENSMUSG00000061613.14_31866055_31877712_5	chr17	-	737	6	FSM	ENSMUSG00000061613.14	ENSMUST00000236475.2	532	6	3	-208	0	0	multi-exon	FALSE	canonical	3	82	junction_5	2542.17667364013	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877712	31866054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31877626
ENSMUSG00000061613.14_31866055_31877712_6	chr17	-	720	8	NNC	ENSMUSG00000061613.14	novel	1046	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2186.81678076904	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877712	31866054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_31866179_31866997_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ENSMUSG00000061689.16_156562966_156604880_1	chr2	+	1424	7	NNC	ENSMUSG00000061689.16	novel	1595	7	NA	NA	0	5	intron_retention	TRUE	canonical	0	0	junction_6	128.840232674253	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGTTTCTCACCCTTCAG	NA	False	NA	16	True	ATTAAA	-19	NA	156562965	156604880	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604610
ENSMUSG00000061689.16_156562966_156604880_2	chr2	+	1430	7	FSM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	1	164	0	5	multi-exon	FALSE	canonical	3	183	junction_1	73.2575365861197	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGTTTCTCACCCTTCAG	NA	False	NA	16	True	ATTAAA	-19	NA	156562965	156604880	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUSG00000061759.16_4382620_4403566_1	chr10	+	701	5	FSM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	153	1575	0	-392	multi-exon	FALSE	canonical	0	0	junction_3	80.5927260985754	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTCATTTTGATAAATG	NA	False	NA	NA	False	AATAAA	-19	NA	4382619	4403566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471
ENSMUSG00000061759.16_4382620_4405140_2	chr10	+	1865	4	NNC	ENSMUSG00000061759.16	novel	5044	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	90.5428075553216	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCACTGGTTTTTATTT	NA	False	NA	8	True	AATAAA	-17	NA	4382619	4405140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_4382712_4384827_4384934_4389491_4389719_4403700
ENSMUSG00000061759.16_4382620_4405140_3	chr10	+	2275	5	FSM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	153	1	0	0	multi-exon	FALSE	canonical	0	0	junction_3	80.5927260985754	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCACTGGTTTTTATTT	NA	False	NA	8	True	AATAAA	-17	NA	4382619	4405140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471
ENSMUSG00000061778.11_163719165_163763324_1	chrX	-	2659	15	FSM	ENSMUSG00000061778.11	ENSMUST00000112247.9	2479	15	-31	-149	0	0	multi-exon	FALSE	canonical	1	3	junction_1	17.508598470699	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTCTCTAATTGATA	NA	False	NA	NA	False	AATAAA	-18	NA	163763324	163719164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_163720300_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
ENSMUSG00000061787.16_80992481_80994757_1	chr7	-	431	4	NNC	ENSMUSG00000061787.16	novel	494	5	NA	NA	215	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6253.1727591324	24637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	False	NA	-10	True	AATAAA	-12	NA	80994757	80992480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_80992587_80993482_80993549_80994058_80994165_80994604
ENSMUSG00000061787.16_80992481_80994975_1	chr7	-	460	5	NNC	ENSMUSG00000061787.16	novel	494	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5415.43370262253	113538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	False	NA	-10	True	AATAAA	-12	NA	80994975	80992480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_80992587_80993478_80993549_80994058_80994165_80994604_80994757_80994949
ENSMUSG00000061787.16_80992481_80994975_2	chr7	-	463	5	NNC	ENSMUSG00000061787.16	novel	494	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5323.36582318931	62032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	False	NA	-10	True	AATAAA	-12	NA	80994975	80992480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_80992598_80993482_80993536_80994049_80994165_80994604_80994757_80994949
ENSMUSG00000061787.16_80992481_80994975_3	chr7	-	446	5	NNC	ENSMUSG00000061787.16	novel	494	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5323.36582318931	27325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	False	NA	-10	True	AATAAA	-12	NA	80994975	80992480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_80992598_80993482_80993549_80994079_80994165_80994604_80994757_80994949
ENSMUSG00000061787.16_80992481_80994975_4	chr7	-	907	4	NIC	ENSMUSG00000061787.16	novel	494	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	8882	junction_3	2020.94301420566	2778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	False	NA	-10	True	AATAAA	-12	NA	80994975	80992480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_80992598_80993482_80993549_80994058_80994757_80994949
ENSMUSG00000061787.16_80992481_80994975_5	chr7	-	528	5	NNC	ENSMUSG00000061787.16	novel	494	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5415.43370262253	103536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	False	NA	-10	True	AATAAA	-12	NA	80994975	80992480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_80992598_80993421_80993549_80994058_80994165_80994604_80994757_80994949
ENSMUSG00000061787.16_80992481_80994975_6	chr7	-	449	5	NNC	ENSMUSG00000061787.16	novel	494	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5371.50165223841	18009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	False	NA	-10	True	AATAAA	-12	NA	80994975	80992480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_80992598_80993482_80993549_80994058_80994143_80994600_80994757_80994949
ENSMUSG00000061787.16_80992481_80994975_7	chr7	-	454	5	NNC	ENSMUSG00000061787.16	novel	494	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5323.36582318931	109457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	False	NA	-10	True	AATAAA	-12	NA	80994975	80992480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_80992598_80993482_80993536_80994058_80994165_80994604_80994757_80994949
ENSMUSG00000061787.16_80992481_80994975_8	chr7	-	462	5	NNC	ENSMUSG00000061787.16	novel	494	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5323.36582318931	54972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	False	NA	-10	True	AATAAA	-12	NA	80994975	80992480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_80992598_80993482_80993531_80994045_80994165_80994604_80994757_80994949
ENSMUSG00000061787.16_80992481_80994975_9	chr7	-	453	5	NNC	ENSMUSG00000061787.16	novel	494	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5696.52329824956	35859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	False	NA	-10	True	AATAAA	-12	NA	80994975	80992480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_80992598_80993482_80993549_80994058_80994165_80994604_80994739_80994945
ENSMUSG00000061838.8_95451123_95695781_1	chr6	-	2234	11	FSM	ENSMUSG00000061838.8	ENSMUST00000204224.3	3367	11	0	1133	0	0	multi-exon	FALSE	canonical	3	467	junction_5	91.8564096838103	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCACAGTTCTTGTTTCT	NA	False	NA	-7	True	AATAAA	-22	NA	95695781	95451122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ENSMUSG00000061838.8_95451123_95695781_2	chr6	-	2102	12	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	224.222734598309	2017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCACAGTTCTTGTTTCT	NA	False	NA	-7	True	AATAAA	-22	NA	95695781	95451122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_95451294_95451425_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ENSMUSG00000061838.8_95451875_95695781_1	chr6	-	1482	11	FSM	ENSMUSG00000061838.8	ENSMUST00000204224.3	3367	11	0	1885	0	-752	multi-exon	FALSE	canonical	3	467	junction_5	91.8564096838103	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTGTAGTCATTGTTT	NA	False	NA	NA	False	NA	NA	NA	95695781	95451874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ENSMUSG00000061904.13_90952653_90959829_1	chr10	-	2817	7	NIC	ENSMUSG00000061904.13	novel	1395	8	NA	NA	-10	0	intron_retention	FALSE	canonical	1	1248	junction_6	1076.15746472758	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959829	90952652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90959569_90959777
ENSMUSG00000061904.13_90952653_90959829_2	chr10	-	1308	8	NNC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1601.27180320991	14841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959829	90952652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959414_90959569_90959777
ENSMUSG00000061904.13_90952653_90959829_3	chr10	-	1298	8	NNC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	110	junction_4	1601.06863547763	12249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959829	90952652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955393_90955569_90957783_90957906_90959419_90959569_90959777
ENSMUSG00000061904.13_90952653_90959829_4	chr10	-	1297	8	NNC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1630.6211286826	8095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959829	90952652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_90952987_90953074_90953180_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959777
ENSMUSG00000061904.13_90952653_90959829_5	chr10	-	1296	8	NNC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1601.27180320991	5507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959829	90952652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957899_90959419_90959569_90959777
ENSMUSG00000061904.13_90952653_90959829_6	chr10	-	1063	7	NNC	ENSMUSG00000061904.13	novel	1395	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1666.76043069583	554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959829	90952652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955451_90959419_90959569_90959777
ENSMUSG00000061904.13_90952653_90959829_7	chr10	-	1428	9	NIC	ENSMUSG00000061904.13	novel	1341	8	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	85	junction_7	1769.02471364874	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959829	90952652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90958068_90958194_90959419_90959569_90959777
ENSMUSG00000061904.13_90952653_90959829_8	chr10	-	1296	8	NNC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1601.27180320991	8643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959829	90952652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959426_90959569_90959777
ENSMUSG00000061904.13_90952653_90959829_9	chr10	-	1301	8	NNC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	37	junction_6	1591.1564014507	14014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959829	90952652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957899_90959414_90959569_90959777
ENSMUSG00000061983.8_23661081_23663100_1	chr10	-	506	6	NNC	ENSMUSG00000061983.8	novel	584	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	1669.3762427925	267471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23663100	23661080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662774_23662891_23662943_23663053
ENSMUSG00000061983.8_23661081_23663100_2	chr10	-	503	6	NNC	ENSMUSG00000061983.8	novel	584	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1586.65439210938	248648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23663100	23661080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_23661172_23661473_23661576_23661799_23661895_23662661_23662779_23662891_23662943_23663053
ENSMUSG00000061983.8_23661081_23663100_3	chr10	-	650	6	NIC	ENSMUSG00000061983.8	novel	584	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	98	junction_3	1551.61727239677	24267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23663100	23661080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_23661172_23661473_23661576_23661799_23661903_23662522_23662779_23662891_23662943_23663053
ENSMUSG00000062007.14_72943482_72955265_1	chr8	+	1718	6	FSM	ENSMUSG00000062007.14	ENSMUST00000072097.14	1824	6	0	106	0	-106	multi-exon	FALSE	canonical	3	5	junction_2	2.28035085019828	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCCAGGTGTTGAGG	NA	False	NA	NA	False	NA	NA	NA	72943481	72955265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_72943532_72947282_72947430_72950639_72950730_72951582_72951749_72952211_72952332_72954120
ENSMUSG00000062014.14_47045606_47059651_1	chr14	-	4129	7	NNC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	212.21091447478	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTTTTATTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	47059651	47045605	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_47049281_47051700_47051775_47052361_47052451_47053055_47053106_47053634_47053685_47054842_47054940_47059557
ENSMUSG00000062014.14_47045606_47059651_2	chr14	-	4122	7	NNC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	212.21091447478	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTTTTATTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	47059651	47045605	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_47049281_47051700_47051775_47052361_47052430_47053041_47053106_47053634_47053685_47054842_47054940_47059557
ENSMUSG00000062014.14_47048143_47059651_1	chr14	-	1592	7	NNC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	-10	718	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	212.21091447478	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAATTCTAATATGAAC	NA	False	NA	NA	False	AATAGA	-27	NA	47059651	47048142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_47049281_47051700_47051775_47052361_47052451_47053055_47053106_47053634_47053685_47054842_47054940_47059557
ENSMUSG00000062014.14_47049131_47059651_1	chr14	-	604	7	NNC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	212.21091447478	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGCACTGTTACTTA	NA	False	NA	-2	True	CATAAA	-15	NA	47059651	47049130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_47049281_47051700_47051775_47052361_47052451_47053055_47053106_47053634_47053685_47054842_47054940_47059557
ENSMUSG00000062054.8_21366415_21370156_1	chr12	+	687	4	FSM	ENSMUSG00000062054.8	ENSMUST00000223345.2	1890	4	0	1203	0	-621	multi-exon	FALSE	canonical	3	412	junction_2	19.3964487013015	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCAATTTTGCTACTC	NA	False	NA	19	True	NA	NA	NA	21366414	21370156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770
ENSMUSG00000062054.8_21366415_21373608_1	chr12	+	872	6	NIC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	0	-212	combination_of_known_splicesites	FALSE	canonical	3	85	junction_2	143.346293987672	2024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTTCATGATTATTGA	NA	False	NA	9	True	ATTAAA	-19	NA	21366414	21373608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_21366514_21367376_21367430_21367930_21368048_21369770_21369933_21371334_21371457_21373289
ENSMUSG00000062054.8_21366415_21373608_2	chr12	+	904	6	FSM	ENSMUSG00000062054.8	ENSMUST00000076813.8	1141	6	25	212	0	-212	multi-exon	FALSE	canonical	3	356	junction_4	39.1131691377725	2177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTTCATGATTATTGA	NA	False	NA	9	True	ATTAAA	-19	NA	21366414	21373608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770_21369933_21371334_21371457_21373289
ENSMUSG00000062064.7_150242285_150253481_1	chr4	+	1749	7	ISM	ENSMUSG00000062064.7	ENSMUST00000059893.8	1578	12	8856	-542	0	542	3prime_fragment	FALSE	canonical	3	15	junction_6	2.35702260395516	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTATTTGGGCTCCGGTTC	1362	False	NA	NA	False	NA	NA	NA	150242284	150253481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_150242665_150242931_150243123_150244475_150244587_150247654_150247757_150249565_150249642_150250811_150250940_150252720
ENSMUSG00000062101.13_56245381_56261524_1	chr17	-	2191	5	NNC	ENSMUSG00000062101.13	novel	2078	4	NA	NA	-5024	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	18.0346887968714	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATATTTATGTTGT	9732	False	NA	NA	False	AATAAA	-12	NA	56261524	56245380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_56246994_56247928_56247990_56248185_56248313_56256223_56256498_56261408
ENSMUSG00000062127.12_104910777_104960270_1	chr3	-	3293	6	FSM	ENSMUSG00000062127.12	ENSMUST00000098763.7	4834	6	-3	1544	0	-1544	multi-exon	FALSE	canonical	3	66	junction_1	8.46167832052247	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCTCACATCATCAGCAT	1469	False	NA	NA	False	AAGAAA	-33	NA	104960270	104910776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940077_104946180_104946304_104960215
ENSMUSG00000062169.14_180978496_180993813_1	chr1	+	522	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	0	2746	0	0	multi-exon	FALSE	canonical	3	1843	junction_1	136.918543302213	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACAATTGAGGAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	180978495	180993813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
ENSMUSG00000062169.14_180978496_180993951_1	chr1	+	553	5	NNC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	846.043253917907	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTTTGTAGATTTCT	NA	False	NA	8	True	AATAAA	-1	NA	180978495	180993951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989729_180993800
ENSMUSG00000062169.14_180978496_180993951_2	chr1	+	816	6	NNC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	994.781302598717	3800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTTTGTAGATTTCT	NA	False	NA	8	True	AATAAA	-1	NA	180978495	180993951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_180978627_180981299_180981369_180982313_180982470_180983423_180983537_180989639_180989781_180993745
ENSMUSG00000062170.13_67805445_67848173_1	chrX	+	792	5	NNC	ENSMUSG00000062170.13	novel	799	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	309.510904492879	3734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATTCTTTTTGTTAAA	NA	False	NA	27	True	ATTAAA	-27	NA	67805444	67848173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_67805838_67807537_67807620_67815661_67815748_67847210_67847300_67848031
ENSMUSG00000062170.13_67805445_67848173_2	chrX	+	715	4	NNC	ENSMUSG00000062170.13	novel	799	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	303.506543952881	1798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATTCTTTTTGTTAAA	NA	False	NA	27	True	ATTAAA	-27	NA	67805444	67848173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_67805838_67815650_67815748_67847216_67847300_67848031
ENSMUSG00000062170.13_67805445_67848173_3	chrX	+	702	4	NIC	ENSMUSG00000062170.13	novel	799	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	303.706364035322	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATTCTTTTTGTTAAA	NA	False	NA	27	True	ATTAAA	-27	NA	67805444	67848173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_67805838_67807537_67807616_67847210_67847300_67848031
ENSMUSG00000062175.14_156682346_156697490_1	chr2	+	2760	3	NNC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	326	0	intron_retention	FALSE	canonical	3	30	junction_1	93.5	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156682345	156697490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_156682438_156686075_156686302_156695048
ENSMUSG00000062175.14_156682942_156697490_1	chr2	+	2737	3	NIC	ENSMUSG00000062175.14	novel	484	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_1	89.5	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156682941	156697490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_156683011_156686075_156686302_156695048
ENSMUSG00000062190.13_57680072_57715258_1	chr6	+	1849	9	FSM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	451	209	0	-209	multi-exon	TRUE	canonical	3	58	junction_1	7.80924932371864	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGGCAGGTCAGTGTGC	NA	False	NA	NA	False	NA	NA	NA	57680071	57715258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
ENSMUSG00000062190.13_57680072_57716427_1	chr6	+	3018	9	FSM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	451	-960	0	3	multi-exon	FALSE	canonical	3	58	junction_1	7.80924932371864	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGGAGTCTTAATATTT	NA	False	NA	11	True	AATAAA	-21	NA	57680071	57716427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
ENSMUSG00000062198.6_55092461_55126893_1	chr12	-	827	6	NIC	ENSMUSG00000062198.6	novel	1105	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	82.0243866176395	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGAAATGTTTTGTT	NA	False	NA	-14	True	AATAAA	-25	NA	55126893	55092460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55109772_55109895_55126765
ENSMUSG00000062198.6_55092461_55126893_2	chr12	-	1170	8	NIC	ENSMUSG00000062198.6	novel	1105	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_4	59.7586984531652	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGAAATGTTTTGTT	NA	False	NA	-14	True	AATAAA	-25	NA	55126893	55092460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106159_55106364_55107839_55107979_55109772_55109895_55126765
ENSMUSG00000062198.6_55092461_55126893_3	chr12	-	716	5	NIC	ENSMUSG00000062198.6	novel	1105	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	91.499658469308	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGAAATGTTTTGTT	NA	False	NA	-14	True	AATAAA	-25	NA	55126893	55092460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_55092729_55095671_55095763_55100085_55100193_55109772_55109895_55126765
ENSMUSG00000062198.6_55092461_55201741_1	chr12	-	1095	8	Fusion	ENSMUSG00000112022.3_ENSMUSG00000062198.6	novel	1105	8	NA	NA	-60	0	multi-exon	FALSE	canonical	3	143	junction_4	24.4423520027957	1033	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGAAATGTTTTGTT	NA	False	NA	-14	True	AATAAA	-25	NA	55201741	55092460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55201606
ENSMUSG00000062203.16_11038265_11042362_1	chr16	-	817	4	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	29711	349	0	0	3prime_fragment	FALSE	canonical	3	1391	junction_2	199.270335641476	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTTCGGTATTTGAAT	NA	False	NA	-17	True	AATAAA	-13	NA	11042362	11038264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283
ENSMUSG00000062203.16_11038265_11056769_1	chr16	-	1710	12	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	15304	349	-1085	0	3prime_fragment	FALSE	canonical	3	1176	junction_9	170.184974718201	379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTTCGGTATTTGAAT	9384	False	NA	-17	True	AATAAA	-13	NA	11056769	11038264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735
ENSMUSG00000062203.16_11038265_11056893_1	chr16	-	1834	12	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	15180	349	-1209	0	3prime_fragment	FALSE	canonical	3	1176	junction_9	170.184974718201	395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTTCGGTATTTGAAT	9260	False	NA	-17	True	AATAAA	-13	NA	11056893	11038264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735
ENSMUSG00000062210.14_50112558_50224849_1	chr18	+	1719	2	FSM	ENSMUSG00000062210.14	ENSMUST00000148989.3	1002	2	64	-781	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGGATTTAGATTGTGTT	NA	False	NA	11	True	AATAAA	-24	NA	50112557	50224849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_50112694_50223266
ENSMUSG00000062234.15_108754257_108777621_1	chr5	-	1089	9	ISM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	-16	36977	0	7241	5prime_fragment	FALSE	canonical	3	320	junction_7	19.5240236631694	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCACAGAGGTGAGGACA	NA	False	NA	NA	False	NA	NA	NA	108777621	108754256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ENSMUSG00000062248.6_51799268_51804796_1	chr13	+	792	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	0	-100	0	100	multi-exon	FALSE	canonical	3	3514	junction_2	7.5	21973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAAGCTCCAAATGAGGA	NA	False	NA	NA	False	AATAAA	-18	NA	51799267	51804796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_51799508_51803620_51803749_51804372
ENSMUSG00000062270.15_89973724_89996712_1	chr9	-	1703	12	FSM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	115	6	0	0	multi-exon	FALSE	canonical	3	3415	junction_7	1167.30044572017	12858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996712	89973723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ENSMUSG00000062270.15_89973724_89996712_2	chr9	-	1702	12	NNC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2075.65946903748	12409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996712	89973723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992221_89996584
ENSMUSG00000062270.15_89974208_89996712_1	chr9	-	1219	12	FSM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	115	490	0	0	multi-exon	FALSE	canonical	3	3415	junction_7	1167.30044572017	4252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTCTTCCTTTTTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	89996712	89974207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ENSMUSG00000062270.15_89974208_89996712_2	chr9	-	1336	13	FSM	ENSMUSG00000062270.15	ENSMUST00000085248.12	1882	13	56	490	0	0	multi-exon	FALSE	canonical	3	323	junction_10	2408.59367105002	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTCTTCCTTTTTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	89996712	89974207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707_89985825_89989287_89989356_89992178_89992226_89996588
ENSMUSG00000062328.9_75133548_75136345_2	chr18	+	659	7	NNC	ENSMUSG00000062328.9	novel	775	7	NA	NA	0	-106	at_least_one_novel_splicesite	FALSE	canonical	1	150	junction_4	4107.39291467904	51022	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTGGTGGTCTTTAA	NA	False	NA	33	True	AATAAA	-33	NA	75133547	75136345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135103_75135194_75135731_75135924_75136264
ENSMUSG00000062328.9_75133548_75136345_3	chr18	+	690	7	NNC	ENSMUSG00000062328.9	novel	775	7	NA	NA	0	-106	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	4306.59674865845	124335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTGGTGGTCTTTAA	NA	False	NA	33	True	AATAAA	-33	NA	75133547	75136345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_75133615_75134239_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
ENSMUSG00000062328.9_75133548_75136345_4	chr18	+	1166	5	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	0	-106	intron_retention	FALSE	canonical	3	6761	junction_1	1793.50557568132	2190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTGGTGGTCTTTAA	NA	False	NA	33	True	AATAAA	-33	NA	75133547	75136345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_75133615_75134261_75134315_75134420_75135194_75135731_75135924_75136264
ENSMUSG00000062328.9_75133548_75136345_5	chr18	+	943	6	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	0	-106	intron_retention	FALSE	canonical	3	6761	junction_1	1972.2719285129	3950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTGGTGGTCTTTAA	NA	False	NA	33	True	AATAAA	-33	NA	75133547	75136345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_75133615_75134261_75134315_75134420_75134872_75135094_75135194_75135731_75135924_75136264
ENSMUSG00000062328.9_75133548_75136345_6	chr18	+	627	6	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	0	-106	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	4174.34437486895	8501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTGGTGGTCTTTAA	NA	False	NA	33	True	AATAAA	-33	NA	75133547	75136345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_75133615_75134261_75134315_75134736_75134872_75135094_75135194_75135731_75135924_75136264
ENSMUSG00000062328.9_75133548_75136345_7	chr18	+	891	6	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	0	-106	intron_retention	FALSE	canonical	3	6761	junction_1	2106.83161168614	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTGGTGGTCTTTAA	NA	False	NA	33	True	AATAAA	-33	NA	75133547	75136345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75135194_75135731_75135924_75136264
ENSMUSG00000062352.16_21320705_21336194_2	chr12	-	1186	7	FSM	ENSMUSG00000062352.16	ENSMUST00000173729.8	1701	7	-96	611	-8	0	multi-exon	FALSE	canonical	3	43	junction_6	78.2148039411693	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAAAAGAGAAGCCTTGG	NA	False	NA	-11	True	AATAAA	-14	NA	21336194	21320704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21335852
ENSMUSG00000062376.8_46678345_46690348_1	chr19	+	702	4	NNC	ENSMUSG00000062376.8	novel	2176	5	NA	NA	0	-1473	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	81.4411853220879	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACCTCAGCTTGTTAAAA	9071	False	NA	NA	False	AATAAA	-32	NA	46678344	46690348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_46678525_46687994_46688058_46688176_46688241_46689953
ENSMUSG00000062380.5_124138329_124148754_1	chr8	+	1702	4	FSM	ENSMUSG00000062380.5	ENSMUST00000071134.4	1868	4	166	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	7.03957069398096	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTATTGGAGATTTCT	NA	False	NA	27	True	AATAAA	-27	NA	124138328	124148754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124138402_124144831_124144941_124145678_124145790_124147345
ENSMUSG00000062380.5_124138329_124148754_2	chr8	+	1597	5	NNC	ENSMUSG00000062380.5	novel	1868	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.4424907204916	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTATTGGAGATTTCT	NA	False	NA	27	True	AATAAA	-27	NA	124138328	124148754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_124138402_124144831_124144941_124145678_124145790_124147345_124147487_124147591
ENSMUSG00000062397.9_36999245_37007545_1	chr15	-	2342	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	101	1974	101	1627	multi-exon	TRUE	canonical	3	6501	junction_2	212.49836600679	5655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCTAATTTCTTGTACC	256	False	NA	-6	True	ATTAAA	-19	NA	37007545	36999244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
ENSMUSG00000062397.9_37001058_37007545_1	chr15	-	529	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	101	3787	101	0	multi-exon	FALSE	canonical	3	6501	junction_2	212.49836600679	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTTACGCTGTTCC	256	False	NA	-4	True	AATAAA	-15	NA	37007545	37001057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
ENSMUSG00000062480.13_13118174_13143443_1	chr17	-	1880	13	NNC	ENSMUSG00000062480.13	novel	2144	10	NA	NA	3126	24526	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	5756	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTGTAACTCCAGTGG	NA	False	NA	NA	False	NA	NA	NA	13143443	13118173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_13118180_13135329_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000062480.13_13135269_13143443_1	chr17	-	1751	10	NIC	ENSMUSG00000062480.13	novel	2144	10	NA	NA	3126	7431	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGTAGGGATTGACAGACG	NA	False	NA	NA	False	NA	NA	NA	13143443	13135268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_13135517_13136929_13137059_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000062480.13_13135269_13143443_2	chr17	-	1914	13	NNC	ENSMUSG00000062480.13	novel	2144	10	NA	NA	3126	7431	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGTAGGGATTGACAGACG	NA	False	NA	NA	False	NA	NA	NA	13143443	13135268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_13135360_13135380_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000062480.13_13135269_13143954_1	chr17	-	2360	11	NIC	ENSMUSG00000062480.13	novel	2144	10	NA	NA	2615	7431	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1947	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGTAGGGATTGACAGACG	NA	False	NA	NA	False	NA	NA	NA	13143954	13135268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_13135517_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000062480.13_13135336_13143443_1	chr17	-	1863	12	NNC	ENSMUSG00000062480.13	novel	2144	10	NA	NA	3126	7364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	784	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCTGCTGGGTAACACG	NA	False	NA	NA	False	NA	NA	NA	13143443	13135335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138706_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000062480.13_13135336_13143443_10	chr17	-	1863	12	NNC	ENSMUSG00000062480.13	novel	2144	10	NA	NA	3126	7364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	971	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCTGCTGGGTAACACG	NA	False	NA	NA	False	NA	NA	NA	13143443	13135335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141500_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000062480.13_13135336_13143443_2	chr17	-	1107	8	NNC	ENSMUSG00000062480.13	novel	2123	9	NA	NA	3126	7364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	455	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCTGCTGGGTAACACG	NA	False	NA	NA	False	NA	NA	NA	13143443	13135335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139702_13143198
ENSMUSG00000062480.13_13135336_13143443_3	chr17	-	1875	12	NNC	ENSMUSG00000062480.13	novel	2144	10	NA	NA	3126	7364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	446	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCTGCTGGGTAACACG	NA	False	NA	NA	False	NA	NA	NA	13143443	13135335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141627_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000062480.13_13135336_13143443_4	chr17	-	1855	12	NNC	ENSMUSG00000062480.13	novel	2144	10	NA	NA	3126	7364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	640	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCTGCTGGGTAACACG	NA	False	NA	NA	False	NA	NA	NA	13143443	13135335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139332_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000062480.13_13135336_13143443_5	chr17	-	1856	12	NNC	ENSMUSG00000062480.13	novel	2144	10	NA	NA	3126	7364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	804	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCTGCTGGGTAACACG	NA	False	NA	NA	False	NA	NA	NA	13143443	13135335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_13135517_13136696_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000062480.13_13135336_13143443_6	chr17	-	1112	8	NNC	ENSMUSG00000062480.13	novel	2123	9	NA	NA	3126	7364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	427	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCTGCTGGGTAACACG	NA	False	NA	NA	False	NA	NA	NA	13143443	13135335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139702_13143193
ENSMUSG00000062480.13_13135336_13143443_7	chr17	-	1853	12	NNC	ENSMUSG00000062480.13	novel	2144	10	NA	NA	3126	7364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	699	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCTGCTGGGTAACACG	NA	False	NA	NA	False	NA	NA	NA	13143443	13135335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142431_13142581_13143146
ENSMUSG00000062480.13_13135336_13143443_8	chr17	-	1861	12	NNC	ENSMUSG00000062480.13	novel	2144	10	NA	NA	3126	7364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	885	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCTGCTGGGTAACACG	NA	False	NA	NA	False	NA	NA	NA	13143443	13135335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142111_13142298_13142416_13142581_13143146
ENSMUSG00000062480.13_13135336_13143443_9	chr17	-	1115	8	NNC	ENSMUSG00000062480.13	novel	2123	9	NA	NA	3126	7364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	453	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCTGCTGGGTAACACG	NA	False	NA	NA	False	NA	NA	NA	13143443	13135335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139710_13143198
ENSMUSG00000062480.13_13135336_13143954_1	chr17	-	2293	11	NIC	ENSMUSG00000062480.13	novel	2144	10	NA	NA	2615	7364	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1857	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCTGCTGGGTAACACG	NA	False	NA	NA	False	NA	NA	NA	13143954	13135335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_13135517_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000062480.13_13135336_13143954_2	chr17	-	2379	12	NIC	ENSMUSG00000062480.13	novel	2144	10	NA	NA	2615	7364	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	8642	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCTGCTGGGTAACACG	NA	False	NA	NA	False	NA	NA	NA	13143954	13135335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000062480.13_13135336_13157843_1	chr17	-	1914	13	NNC	ENSMUSG00000062480.13	novel	2144	10	NA	NA	1446	7364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	7931	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCTGCTGGGTAACACG	NA	False	NA	NA	False	NA	NA	NA	13157843	13135335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146_13143453_13157806
ENSMUSG00000062480.13_13135336_13157843_2	chr17	-	1894	13	NNC	ENSMUSG00000062480.13	novel	2144	10	NA	NA	1446	7364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	7959	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCTGCTGGGTAACACG	NA	False	NA	NA	False	NA	NA	NA	13157843	13135335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146_13143453_13157826
ENSMUSG00000062510.13_190795209_190816755_1	chr1	+	2929	7	NNC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	0	-1916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	82.1517904045108	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTTTACTGTATTTT	NA	False	NA	16	True	AATAAA	-20	NA	190795208	190816755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190812685_190812754_190814367_190815835_190815887
ENSMUSG00000062510.13_190795209_190816755_2	chr1	+	2982	6	FSM	ENSMUSG00000062510.13	ENSMUST00000078259.8	4879	6	-19	1916	0	-1916	multi-exon	FALSE	canonical	3	202	junction_5	16.7164589551735	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTTTACTGTATTTT	NA	False	NA	16	True	AATAAA	-20	NA	190795208	190816755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190812685_190812754_190814367
ENSMUSG00000062518.8_147760319_147787056_1	chr4	-	571	4	FSM	ENSMUSG00000062518.8	ENSMUST00000117638.2	2885	4	-46	2360	-46	-2360	multi-exon	FALSE	canonical	3	115	junction_2	89.2238134630486	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTTAAGCCCAGGAAC	NA	False	NA	NA	False	NA	NA	NA	147787056	147760318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147760511_147762673_147762801_147766723_147766828_147786908
ENSMUSG00000062519.14_47812629_47843998_1	chr6	+	2251	6	FSM	ENSMUSG00000062519.14	ENSMUST00000079881.11	2906	6	31	624	0	-624	multi-exon	FALSE	canonical	3	16	junction_3	4.17612260356422	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAACTAGAGACATGCTTG	NA	False	NA	5	True	CATAAA	-18	NA	47812628	47843998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_47812855_47817185_47817582_47835862_47835990_47836352_47836467_47840037_47840152_47842724
ENSMUSG00000062580.10_135229418_135241516_1	chr1	-	813	6	FSM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	0	6467	0	136	multi-exon	FALSE	canonical	3	2331	junction_5	176.235070289656	4444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTATATGAGCTTAGAA	NA	False	NA	-6	True	AATAAA	-19	NA	135241516	135229417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508_135237609_135241431
ENSMUSG00000062580.10_135229554_135241516_1	chr1	-	677	6	FSM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	0	6603	0	0	multi-exon	FALSE	canonical	3	2331	junction_5	176.235070289656	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAGCGGGCCATAAAGAG	NA	False	NA	-90	True	TTTAAA	-22	NA	135241516	135229553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508_135237609_135241431
ENSMUSG00000062604.12_23711138_23880977_1	chr5	-	3584	16	NIC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-12	-688	combination_of_known_junctions	FALSE	canonical	3	183	junction_8	31.7487357578569	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTTGCTTATTACCC	NA	False	NA	-3	True	ATTAAA	-24	NA	23880977	23711137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ENSMUSG00000062604.12_23711744_23880977_1	chr5	-	2978	16	NIC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-12	-1294	combination_of_known_junctions	FALSE	canonical	3	183	junction_8	31.7487357578569	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTGTCACCTCTCACCA	NA	False	NA	NA	False	TTTAAA	-42	NA	23880977	23711743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ENSMUSG00000062646.13_120185793_120234562_2	chr2	+	2889	20	NIC	ENSMUSG00000062646.13	novel	3099	5	NA	NA	-48584	-10276	intron_retention	FALSE	non_canonical	0	0	junction_1	0	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTTCTTCCGGCTAGGT	NA	False	NA	NA	False	NA	NA	NA	120185792	120234562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202114_120204968_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ENSMUSG00000062646.13_120185793_120234562_3	chr2	+	2870	21	NNC	ENSMUSG00000062646.13	novel	3099	5	NA	NA	-48584	-10276	intron_retention	FALSE	non_canonical	0	0	junction_1	0	463	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTTCTTCCGGCTAGGT	NA	False	NA	NA	False	NA	NA	NA	120185792	120234562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_120185973_120185996_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202103_120204372_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ENSMUSG00000062646.13_120185793_120234562_4	chr2	+	2863	21	NNC	ENSMUSG00000062646.13	novel	3099	5	NA	NA	-48584	-10276	intron_retention	FALSE	non_canonical	0	0	junction_1	0	332	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTTCTTCCGGCTAGGT	NA	False	NA	NA	False	NA	NA	NA	120185792	120234562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_120185973_120185998_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202114_120204968_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ENSMUSG00000062646.13_120185793_120234562_5	chr2	+	2866	21	NNC	ENSMUSG00000062646.13	novel	3099	5	NA	NA	-48584	-10276	intron_retention	TRUE	non_canonical	0	0	junction_1	0	352	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTTCTTCCGGCTAGGT	NA	False	NA	NA	False	NA	NA	NA	120185792	120234562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_120185984_120186011_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202103_120204372_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ENSMUSG00000062683.12_102571299_102579562_1	chr15	-	726	5	NNC	ENSMUSG00000062683.12	novel	731	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	1906.98328519156	46044	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	3901	False	NA	-11	True	AATAAA	-17	NA	102579562	102571298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_102571564_102573488_102573683_102574197_102574286_102576145_102576215_102579452
ENSMUSG00000062691.11_79223929_79228477_1	chr17	+	1344	5	FSM	ENSMUSG00000062691.11	ENSMUST00000180077.7	602	5	0	-742	0	742	multi-exon	FALSE	canonical	3	686	junction_1	395.694563394546	4454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACAGTTTTGAATCTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	79223928	79228477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_79223955_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ENSMUSG00000062691.11_79224090_79227735_1	chr17	+	609	5	FSM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	144	0	-39	0	multi-exon	FALSE	canonical	3	300	junction_1	562.646592009585	2530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTGTGGGTCTGCAG	NA	False	NA	NA	False	AATAAA	-22	NA	79224089	79227735	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_79224123_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ENSMUSG00000062729.13_171097909_171104468_1	chr1	-	2094	9	NIC	ENSMUSG00000062729.13	novel	4412	8	NA	NA	2933	5654	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	24.4731996273475	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCGGGGCCTGACGTCAC	9481	False	NA	NA	False	NA	NA	NA	171104468	171097908	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_171097985_171098152_171098260_171098772_171098944_171099276_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
ENSMUSG00000062729.13_171097909_171104468_2	chr1	-	1866	8	NIC	ENSMUSG00000062729.13	novel	4412	8	NA	NA	2933	5654	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCGGGGCCTGACGTCAC	9481	False	NA	NA	False	NA	NA	NA	171104468	171097908	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_171097985_171098772_171098944_171099397_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
ENSMUSG00000062753.15_27775627_27782645_1	chr17	-	1594	5	NNC	ENSMUSG00000062753.15	novel	862	5	NA	NA	1452	6920	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	12950	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCAGCCCCGGCTCAGGG	NA	False	NA	NA	False	NA	NA	NA	27782645	27775626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_27775686_27778506_27778673_27779901_27779986_27780434_27780486_27781411
ENSMUSG00000062753.15_27775627_27782645_2	chr17	-	370	4	NNC	ENSMUSG00000062753.15	novel	862	5	NA	NA	1452	6920	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCAGCCCCGGCTCAGGG	NA	False	NA	NA	False	NA	NA	NA	27782645	27775626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_27775724_27778506_27778645_27779901_27779986_27782594
ENSMUSG00000062753.15_27775627_27782645_3	chr17	-	1564	5	NIC	ENSMUSG00000062753.15	novel	862	5	NA	NA	1452	6920	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCAGCCCCGGCTCAGGG	NA	False	NA	NA	False	NA	NA	NA	27782645	27775626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_27775684_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ENSMUSG00000062753.15_27782743_27784682_1	chr17	-	618	5	FSM	ENSMUSG00000062753.15	ENSMUST00000154473.9	862	5	48	196	0	0	multi-exon	FALSE	canonical	3	219	junction_4	17.0934929139717	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCCTCCTTGGGTGGAC	NA	False	NA	49	True	AATAAA	-18	NA	27784682	27782742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535_27783725_27784633
ENSMUSG00000062762.18_36690455_36708569_1	chr9	-	2100	11	FSM	ENSMUSG00000062762.18	ENSMUST00000238932.2	2220	11	120	0	0	0	multi-exon	FALSE	canonical	3	488	junction_2	34.4551882885582	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708569	36690454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
ENSMUSG00000062797.15_89567896_89590373_1	chr7	-	1026	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	39	1159	0	0	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	3246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	14	True	AATAAA	-33	NA	89590373	89567895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
ENSMUSG00000062797.15_89568128_89590373_1	chr7	-	556	4	FSM	ENSMUSG00000062797.15	ENSMUST00000208357.2	806	4	34	216	0	0	multi-exon	FALSE	canonical	3	430	junction_3	356.664485974642	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATGAAGTCAAAAGGGTCA	NA	False	NA	-10	True	AATAAA	-24	NA	89590373	89568127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89590176
ENSMUSG00000062797.15_89568128_89590373_2	chr7	-	794	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	39	1391	0	0	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATGAAGTCAAAAGGGTCA	NA	False	NA	-10	True	AATAAA	-24	NA	89590373	89568127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
ENSMUSG00000062822.9_119599304_119606361_1	chr13	+	1047	4	ISM	ENSMUSG00000062822.9	ENSMUST00000026519.10	2565	13	0	16292	0	0	5prime_fragment	FALSE	canonical	3	76	junction_1	22.7596133534821	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCAGATCTTGAAATCTA	NA	False	NA	-1	True	AATAAA	-15	NA	119599303	119606361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050
ENSMUSG00000062822.9_119599304_119622653_1	chr13	+	2502	13	NIC	ENSMUSG00000062822.9	novel	2565	13	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	42	junction_1	29.2546292633035	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599303	119622653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_119599656_119602609_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ENSMUSG00000062825.16_120236516_120239318_1	chr11	-	1758	7	NNC	ENSMUSG00000062825.16	novel	1952	6	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	2433.92299362344	33276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTTTTTCTGGTTTGG	NA	False	NA	-21	True	AATAAA	-18	NA	120239318	120236515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_120236860_120237003_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
ENSMUSG00000062867.14_108437669_108442772_1	chr9	+	1658	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	713.574052915381	6676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1179	False	NA	25	True	AATAAA	-18	NA	108437668	108442772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440339_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUSG00000062867.14_108437669_108442772_10	chr9	+	1735	15	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	50	junction_9	848.284297862456	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1179	False	NA	25	True	AATAAA	-18	NA	108437668	108442772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441111_108441184_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUSG00000062867.14_108437669_108442772_2	chr9	+	1656	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	705.174350005249	4908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1179	False	NA	25	True	AATAAA	-18	NA	108437668	108442772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438988_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUSG00000062867.14_108437669_108442772_3	chr9	+	1658	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	703.669065574261	6176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1179	False	NA	25	True	AATAAA	-18	NA	108437668	108442772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_108437831_108438232_108438282_108438800_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUSG00000062867.14_108437669_108442772_4	chr9	+	1657	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	712.918760984247	2829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1179	False	NA	25	True	AATAAA	-18	NA	108437668	108442772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439051_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUSG00000062867.14_108437669_108442772_5	chr9	+	1651	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	713.768132341002	3053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1179	False	NA	25	True	AATAAA	-18	NA	108437668	108442772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440631_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUSG00000062867.14_108437669_108442772_6	chr9	+	1658	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	697.229114330306	4286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1179	False	NA	25	True	AATAAA	-18	NA	108437668	108442772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442440_108442525_108442610_108442696
ENSMUSG00000062867.14_108437669_108442772_7	chr9	+	1651	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	712.918760984247	2335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1179	False	NA	25	True	AATAAA	-18	NA	108437668	108442772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439384_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUSG00000062867.14_108437669_108442772_8	chr9	+	1693	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	708.88594988251	2803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1179	False	NA	25	True	AATAAA	-18	NA	108437668	108442772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_108437861_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUSG00000062867.14_108437669_108442772_9	chr9	+	1656	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	677.463534248661	4680	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1179	False	NA	25	True	AATAAA	-18	NA	108437668	108442772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442703
ENSMUSG00000062908.13_153635384_153650084_1	chr3	-	1341	9	ISM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	185	7390	-1	377	5prime_fragment	FALSE	canonical	3	875	junction_8	66.6679036343577	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCGCCCCAGTGACGTC	177	False	NA	NA	False	AATAAA	-14	NA	153650084	153635383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
ENSMUSG00000062929.9_54905602_54909604_1	chr12	-	2628	4	FSM	ENSMUSG00000062929.9	ENSMUST00000221374.2	1128	4	-21	-1479	-21	0	multi-exon	FALSE	canonical	3	53	junction_2	123.758725842755	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAAGCTGTTGAGATG	NA	False	NA	-11	True	AATAAA	-12	NA	54909604	54905601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_54908023_54908121_54908199_54908564_54908619_54909528
ENSMUSG00000062929.9_54907081_54909604_1	chr12	-	1260	4	FSM	ENSMUSG00000062929.9	ENSMUST00000223450.2	2726	4	-21	1487	-21	0	multi-exon	FALSE	canonical	3	31	junction_2	134.037308239162	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTTGCCTTGTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	54909604	54907080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909528
ENSMUSG00000062929.9_54907081_54909604_2	chr12	-	1403	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	58	1479	-21	0	multi-exon	FALSE	canonical	3	200	junction_2	55.9603033904888	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTTGCCTTGTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	54909604	54907080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
ENSMUSG00000062963.11_171116138_171122520_1	chr1	-	957	7	FSM	ENSMUSG00000062963.11	ENSMUST00000144576.8	822	7	-6	-129	-6	0	multi-exon	FALSE	canonical	3	36	junction_3	228.930423685645	3166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGTGGTTCTCATTGA	7360	False	NA	-2	True	AATAAA	-16	NA	171122520	171116137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117427_171117521_171117721_171117790_171122206_171122401_171122493
ENSMUSG00000062963.11_171116138_171122576_1	chr1	-	983	7	NNC	ENSMUSG00000062963.11	novel	1007	7	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	224.140890711376	3224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGTGGTTCTCATTGA	7304	False	NA	-2	True	AATAAA	-16	NA	171122576	171116137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171117790_171122206_171122396_171122489
ENSMUSG00000062981.6_95316668_95337789_1	chr10	-	648	6	NNC	ENSMUSG00000062981.6	novel	666	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1596.79509017281	10053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	False	NA	-9	True	AATAAA	-16	NA	95337789	95316667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332744_95336240_95336385_95337767
ENSMUSG00000062995.13_8630527_8778154_1	chr6	-	1745	14	FSM	ENSMUSG00000062995.13	ENSMUST00000038403.12	2075	14	330	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	7.8401183423021	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTCACTCCTGTTTGGT	-20	True	NA	-1	True	AATAAA	-35	NA	8778154	8630526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_8630798_8643972_8644243_8653496_8653536_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365_8758459_8778071
ENSMUSG00000062997.7_38891592_38895137_1	chr2	-	447	4	FSM	ENSMUSG00000062997.7	ENSMUST00000080861.6	946	4	499	0	-3	0	multi-exon	FALSE	canonical	3	27807	junction_3	5721.16085733967	153197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTCATGTTTTACAT	NA	False	NA	-9	True	AATAAA	-19	NA	38895137	38891591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095
ENSMUSG00000062997.7_38891592_38895137_2	chr2	-	441	4	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16799.5275528808	54060	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTCATGTTTTACAT	NA	False	NA	-9	True	AATAAA	-19	NA	38895137	38891591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_38891772_38894118_38894201_38894743_38894881_38895095
ENSMUSG00000063018.7_7278345_7295887_1	chrX	-	724	3	ISM	ENSMUSG00000063018.7	ENSMUST00000150671.2	885	4	15495	0	-6660	0	3prime_fragment	FALSE	canonical	3	36	junction_1	10.5	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTACTTTGTGGCTTAT	NA	False	NA	-31	True	NA	NA	NA	7295887	7278344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_7278772_7290368_7290524_7295745
ENSMUSG00000063047.10_27664220_27678596_1	chr7	-	436	5	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	0	-2087	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	28.5864915650732	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATAAAGCAATTAATAACT	NA	False	NA	NA	False	AATAAA	-17	NA	27678596	27664219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27678514
ENSMUSG00000063049.5_48121559_48127610_1	chr8	-	883	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	583	1346	583	231	multi-exon	FALSE	canonical	3	212	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACCTTAATTTTCTG	NA	False	NA	-13	True	ATTAAA	-16	NA	48127610	48121558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_48122372_48127540
ENSMUSG00000063052.10_157742339_157772061_1	chr3	+	2039	15	FSM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	40	2063	0	-122	multi-exon	FALSE	canonical	3	641	junction_2	81.4479926714224	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTTTCATATGATTTTT	NA	False	NA	NA	False	TATAAA	-24	NA	157742338	157772061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ENSMUSG00000063052.10_157742339_157772727_1	chr3	+	2705	15	FSM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	40	1397	0	1	multi-exon	FALSE	canonical	3	641	junction_2	81.4479926714224	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATAGTGTTTTTGTTT	NA	False	NA	30	True	AATAAA	-45	NA	157742338	157772727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ENSMUSG00000063172.14_107110457_107137129_1	chr4	+	667	6	NNC	ENSMUSG00000063172.14	novel	365	3	NA	NA	-333	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	143.950547063914	888	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTCCATTTTTTTT	NA	False	NA	2	True	ATTAAA	-13	NA	107110456	107137129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_107110583_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ENSMUSG00000063172.14_107110790_107137130_1	chr4	+	671	6	NNC	ENSMUSG00000063172.14	novel	581	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	155.089135660755	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATTCCATTTTTTTTA	NA	False	NA	3	True	ATTAAA	-14	NA	107110789	107137130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_107110919_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ENSMUSG00000063179.14_130972885_130989568_1	chr7	+	825	5	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	59.6547357717726	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGATTTGGATAAATTT	NA	False	NA	22	True	ATTAAA	-22	NA	130972884	130989568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_130973119_130975793_130975993_130985653_130985730_130986228_130986323_130989346
ENSMUSG00000063179.14_130972885_130989568_2	chr7	+	1186	7	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	82.5873275186131	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGATTTGGATAAATTT	NA	False	NA	22	True	ATTAAA	-22	NA	130972884	130989568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_130973119_130975264_130975560_130975793_130975993_130985653_130985730_130986228_130986323_130986527_130986594_130989346
ENSMUSG00000063200.5_43551866_43555470_1	chr13	+	928	8	NNC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	500.810159967358	3045	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCACATTTCTTTTCT	NA	False	NA	31	True	TATAAA	-31	NA	43551865	43555470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_43552135_43552210_43552272_43552991_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ENSMUSG00000063200.5_43551866_43555470_4	chr13	+	916	7	NNC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	542.550970467804	1289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCACATTTCTTTTCT	NA	False	NA	31	True	TATAAA	-31	NA	43551865	43555470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_43552135_43552210_43552272_43552986_43553058_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ENSMUSG00000063200.5_43552111_43555470_1	chr13	+	735	6	NIC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_2	592.319305780252	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCACATTTCTTTTCT	NA	False	NA	31	True	TATAAA	-31	NA	43552110	43555470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_43552272_43552986_43553046_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ENSMUSG00000063229.16_46490899_46505051_1	chr7	+	1687	8	NIC	ENSMUSG00000063229.16	novel	912	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	2903.73895492817	4251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46490898	46505051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_46491077_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ENSMUSG00000063229.16_46495265_46505051_1	chr7	+	1576	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2907.89742401128	13347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495264	46505051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_46495342_46497029_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ENSMUSG00000063229.16_46495265_46505051_10	chr7	+	1442	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2812.33170743656	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495264	46505051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503504_46504517
ENSMUSG00000063229.16_46495265_46505051_2	chr7	+	875	4	NNC	ENSMUSG00000063229.16	novel	1535	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4137.01360350139	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495264	46505051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_46495342_46501395_46501419_46503406_46503531_46504400
ENSMUSG00000063229.16_46495265_46505051_3	chr7	+	1555	9	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	2722.83995811359	7778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495264	46505051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400_46504779_46504809
ENSMUSG00000063229.16_46495265_46505051_4	chr7	+	1257	7	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3104.3193251053	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495264	46505051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499653_46501332_46501419_46503406_46503531_46504400
ENSMUSG00000063229.16_46495265_46505051_5	chr7	+	997	5	NNC	ENSMUSG00000063229.16	novel	1535	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3600.92796199813	631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495264	46505051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_46495342_46497019_46497104_46501357_46501419_46503406_46503531_46504400
ENSMUSG00000063229.16_46495265_46505051_6	chr7	+	857	3	NNC	ENSMUSG00000063229.16	novel	1535	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4433	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495264	46505051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_46495347_46503406_46503531_46504400
ENSMUSG00000063229.16_46495265_46505051_7	chr7	+	1573	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2862.36284583637	17444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495264	46505051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_46495342_46497019_46497170_46498396_46498502_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ENSMUSG00000063229.16_46495265_46505051_8	chr7	+	1575	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2907.89742401128	20823	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495264	46505051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_46495331_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ENSMUSG00000063229.16_46495265_46505051_9	chr7	+	1468	9	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	2722.83995811359	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495264	46505051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400_46504594_46504711
ENSMUSG00000063235.19_90741057_90748152_1	chr2	-	1079	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	237	0	-139	0	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGGACTCCCCTCACA	NA	False	NA	-1	True	AATAAA	-26	NA	90748152	90741056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
ENSMUSG00000063235.19_90741338_90748152_1	chr2	-	798	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	237	281	-139	0	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAAGATTGTCTGGCTA	NA	False	NA	NA	False	NA	NA	NA	90748152	90741337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
ENSMUSG00000063236.7_76832729_76834932_1	chr15	+	1023	5	NNC	ENSMUSG00000063236.7	novel	1043	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	125.124937562422	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATGGTGTGAGAGAGAG	NA	False	NA	24	True	AATAAA	-16	NA	76832728	76834932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_76832745_76832828_76833129_76833276_76833353_76833743_76833891_76834448
ENSMUSG00000063236.7_76832729_76834932_2	chr15	+	1032	5	NNC	ENSMUSG00000063236.7	novel	1043	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	126.191075357967	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATGGTGTGAGAGAGAG	NA	False	NA	24	True	AATAAA	-16	NA	76832728	76834932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_76832745_76832828_76833129_76833267_76833353_76833743_76833891_76834448
ENSMUSG00000063236.7_76832949_76834932_1	chr15	+	918	4	NNC	ENSMUSG00000063236.7	novel	1111	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	120.808388229736	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATGGTGTGAGAGAGAG	NA	False	NA	24	True	AATAAA	-16	NA	76832948	76834932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_76833120_76833267_76833384_76833743_76833891_76834448
ENSMUSG00000063245.12_146695418_146742069_1	chr4	+	942	6	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	88.7166275283275	2872	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146695417	146742069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146695801_146697966_146698060_146728915_146728962_146739355_146739414_146740256_146740384_146741834
ENSMUSG00000063245.12_146695418_146742069_2	chr4	+	750	6	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	148.349587124468	4906	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146695417	146742069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146695586_146697966_146698060_146728915_146728985_146739355_146739414_146740256_146740384_146741834
ENSMUSG00000063245.12_146695418_146742069_3	chr4	+	798	7	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	0	5	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_5	127.685377218989	4789	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146695417	146742069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146695586_146697966_146698060_146703608_146703692_146728915_146728962_146739355_146739420_146740274_146740384_146741834
ENSMUSG00000063245.12_146695418_146742069_4	chr4	+	810	7	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	127.839417499716	7630	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146695417	146742069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146695586_146697966_146698060_146703608_146703692_146728915_146728962_146739355_146739414_146740256_146740384_146741834
ENSMUSG00000063245.12_146695418_146742069_5	chr4	+	715	6	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	144.968134429605	3224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146695417	146742069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146695586_146697966_146698060_146728915_146728962_146739355_146739420_146740274_146740384_146741834
ENSMUSG00000063245.12_146695418_146742069_6	chr4	+	921	6	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	103.071625581437	3063	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146695417	146742069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146695757_146697966_146698060_146728915_146728985_146739355_146739414_146740256_146740384_146741834
ENSMUSG00000063245.12_146695418_146742069_7	chr4	+	898	6	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	100.036793231291	2971	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146695417	146742069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146695757_146697966_146698060_146728915_146728962_146739355_146739414_146740256_146740384_146741834
ENSMUSG00000063275.16_14031642_14060687_1	chr2	-	735	5	NNC	ENSMUSG00000063275.16	novel	871	6	NA	NA	144	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.8018691180654	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGCATTGTTTCTTGA	NA	False	NA	-2	True	AATAAA	-19	NA	14060687	14031641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_14031818_14040589_14040769_14049593_14049683_14049921_14050067_14060541
ENSMUSG00000063316.14_101333264_101336355_1	chr11	+	467	5	NNC	ENSMUSG00000063316.14	novel	614	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5099.537577075	121403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	2381	False	NA	62	True	ATTAAA	-18	NA	101333263	101336355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336157_101336271
ENSMUSG00000063316.14_101333264_101336355_2	chr11	+	468	5	NNC	ENSMUSG00000063316.14	novel	614	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4769.46262041123	95590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	2381	False	NA	62	True	ATTAAA	-18	NA	101333263	101336355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_101333283_101333548_101333626_101334326_101334497_101336045_101336157_101336264
ENSMUSG00000063320.12_82455685_82459041_1	chr10	-	598	3	FSM	ENSMUSG00000063320.12	ENSMUST00000183363.2	406	3	-17	-175	-11	0	multi-exon	FALSE	canonical	3	187	junction_2	131	3601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTACTATACATTCTTGG	NA	False	NA	0	True	NA	NA	NA	82459041	82455684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_82456052_82458541_82458659_82458927
ENSMUSG00000063354.8_76496583_76501048_1	chr15	-	1937	11	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_10	121.107555503362	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACTGTCTTCTTGTAGA	8666	False	NA	-2	True	AATAAA	-21	NA	76501048	76496582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500772
ENSMUSG00000063354.8_76496583_76501048_2	chr15	-	1741	10	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_9	124.308258816044	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACTGTCTTCTTGTAGA	8666	False	NA	-2	True	AATAAA	-21	NA	76501048	76496582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76500772
ENSMUSG00000063358.18_16853368_16856926_1	chr16	+	797	2	FSM	ENSMUSG00000063358.18	ENSMUST00000232630.2	606	2	166	-357	-88	22	multi-exon	FALSE	canonical	3	670	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTGAAAGGATAGAATTT	1063	False	NA	NA	False	AATAAA	-17	NA	16853367	16856926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_16853416_16856177
ENSMUSG00000063383.6_22366251_22384942_1	chr17	-	586	4	ISM	ENSMUSG00000063383.6	ENSMUST00000080249.6	2872	5	229	2911	229	-2911	5prime_fragment	FALSE	canonical	3	23	junction_2	0.816496580927726	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGTTCTTTACTGTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	22384942	22366250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_22366497_22369015_22369064_22382167_22382317_22384799
ENSMUSG00000063406.12_108208602_108255371_1	chr5	-	2470	15	NNC	ENSMUSG00000063406.12	novel	1045	3	NA	NA	25025	45630	intron_retention	FALSE	non_canonical	0	0	junction_1	0	666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATTACAAGAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	108255371	108208601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_108208730_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000063406.12_108208602_108255371_2	chr5	-	2548	16	NNC	ENSMUSG00000063406.12	novel	1045	3	NA	NA	25025	45630	intron_retention	FALSE	non_canonical	0	0	junction_1	0	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATTACAAGAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	108255371	108208601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_108208730_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000063406.12_108208602_108255371_3	chr5	-	2384	15	NNC	ENSMUSG00000063406.12	novel	1045	3	NA	NA	25025	45630	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATTACAAGAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	108255371	108208601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_108208730_108228776_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000063406.12_108208602_108256654_1	chr5	-	3753	15	NNC	ENSMUSG00000063406.12	novel	1045	3	NA	NA	23742	45630	intron_retention	FALSE	non_canonical	0	0	junction_1	0	2019	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATTACAAGAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	108256654	108208601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_108208730_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000063406.12_108208602_108256654_2	chr5	-	3667	15	NNC	ENSMUSG00000063406.12	novel	1045	3	NA	NA	23742	45630	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATTACAAGAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	108256654	108208601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_108208730_108228776_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000063406.12_108208602_108256872_1	chr5	-	3885	15	NNC	ENSMUSG00000063406.12	novel	1045	3	NA	NA	23524	45630	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	732	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATTACAAGAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	108256872	108208601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_108208730_108228776_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000063406.12_108208602_108256872_2	chr5	-	3971	15	NNC	ENSMUSG00000063406.12	novel	1045	3	NA	NA	23524	45630	intron_retention	FALSE	non_canonical	0	0	junction_1	0	3113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATTACAAGAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	108256872	108208601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_108208730_108228690_108228894_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000063406.12_108270927_108280422_1	chr5	-	2302	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	64	1434	-7	0	multi-exon	FALSE	canonical	3	224	junction_1	14.1656862405839	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAACATTCTGCCTTTC	NA	False	NA	-8	True	AATAAA	-12	NA	108280422	108270926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
ENSMUSG00000063445.15_4529181_4536973_1	chr16	-	1182	5	FSM	ENSMUSG00000063445.15	ENSMUST00000120056.8	2440	5	0	1258	0	0	multi-exon	FALSE	canonical	3	167	junction_4	12.1243556529821	1357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTTCCCAAAAGAAAAGG	4843	False	NA	-6	True	AATAAA	-18	NA	4536973	4529180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4529468_4531503_4531695_4532280_4532531_4534160_4534400_4536758
ENSMUSG00000063445.15_4531275_4536973_1	chr16	-	1124	4	ISM	ENSMUSG00000063445.15	ENSMUST00000074970.8	1155	5	3	1116	0	1098	5prime_fragment	FALSE	canonical	3	167	junction_3	9.79795897113271	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGCTAGGTTTTTTTG	4843	False	NA	NA	False	NA	NA	NA	4536973	4531274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_4531695_4532280_4532531_4534160_4534400_4536758
ENSMUSG00000063480.9_81925538_81931746_1	chr15	-	1212	3	FSM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	53	812	-10	141	multi-exon	FALSE	canonical	3	3045	junction_2	110	17977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCAGCTGTGCCTGATT	4959	False	NA	-19	True	AATAAA	-28	NA	81931746	81925537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81926570_81928097_81928219_81931687
ENSMUSG00000063480.9_81926200_81931746_1	chr15	-	550	3	FSM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	53	1474	-10	-265	multi-exon	FALSE	canonical	3	3045	junction_2	110	8938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTTATATTTTTATTTTT	4959	False	NA	-1	True	NA	NA	NA	81931746	81926199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81926570_81928097_81928219_81931687
ENSMUSG00000063511.12_45025887_45045116_2	chr7	-	294	2	NNC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGGCATGTGATGTC	9091	False	NA	-10	True	AATAAA	-15	NA	45045116	45025886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_45026081_45045016
ENSMUSG00000063524.14_150321697_150333330_1	chr4	+	1727	12	NNC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	5207.93534065052	9358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321696	150333330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332523_150332577_150332942
ENSMUSG00000063524.14_150321697_150333330_2	chr4	+	1710	12	NNC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_1	4868.52726047112	3745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321696	150333330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_150321798_150323952_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ENSMUSG00000063524.14_150321697_150333330_3	chr4	+	1726	12	NNC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	4590.93915561713	9319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321696	150333330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332294_150332397_150332517_150332577_150332942
ENSMUSG00000063524.14_150321697_150333330_4	chr4	+	1733	12	FSM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	288	6	0	0	multi-exon	FALSE	canonical	3	2891	junction_9	3966.2265098293	41242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321696	150333330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ENSMUSG00000063524.14_150321697_150333330_5	chr4	+	438	6	NNC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	6215.49814576434	871	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321696	150333330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328498_150333278
ENSMUSG00000063524.14_150321697_150333330_6	chr4	+	1727	12	NNC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5183.00895568498	8067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321696	150333330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328826_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ENSMUSG00000063524.14_150321697_150333330_7	chr4	+	1726	12	NNC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	5148.78065802601	13895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321696	150333330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332949
ENSMUSG00000063576.13_46985476_46991729_1	chr17	-	1999	12	FSM	ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	101	0	0	0	multi-exon	FALSE	canonical	3	322	junction_11	42.5343808432544	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCCTATTTCTGGCGAC	NA	False	NA	0	True	TATAAA	-17	NA	46991729	46985475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ENSMUSG00000063576.13_46986032_46991729_1	chr17	-	1443	12	FSM	ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	101	556	0	-553	multi-exon	FALSE	canonical	3	322	junction_11	42.5343808432544	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTCCTCCCATGGCTAG	NA	False	NA	NA	False	NA	NA	NA	46991729	46986031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ENSMUSG00000063623.5_29664495_29665077_2	chr7	+	412	2	NNC	ENSMUSG00000063623.5	novel	1081	4	NA	NA	8068	-118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACTCAGCTTTCTGAGA	NA	False	NA	NA	False	NA	NA	NA	29664494	29665077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_29664742_29664912
ENSMUSG00000063623.5_29664495_29665077_3	chr7	+	420	2	NNC	ENSMUSG00000063623.5	novel	1081	4	NA	NA	8068	-118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACTCAGCTTTCTGAGA	NA	False	NA	NA	False	NA	NA	NA	29664494	29665077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_29664750_29664912
ENSMUSG00000063623.5_29664495_29665077_4	chr7	+	513	2	NNC	ENSMUSG00000063623.5	novel	1081	4	NA	NA	8068	-118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACTCAGCTTTCTGAGA	NA	False	NA	NA	False	NA	NA	NA	29664494	29665077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_29664697_29664766
ENSMUSG00000063623.5_29664495_29665077_5	chr7	+	409	2	NNC	ENSMUSG00000063623.5	novel	1081	4	NA	NA	8068	-118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACTCAGCTTTCTGAGA	NA	False	NA	NA	False	NA	NA	NA	29664494	29665077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_29664739_29664912
ENSMUSG00000063646.19_37245557_37249396_1	chr5	+	1020	2	NNC	ENSMUSG00000063646.19	novel	849	3	NA	NA	2843	23	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTTTATTTAAAAAGT	3224	False	NA	NA	False	NA	NA	NA	37245556	37249396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_37245651_37248470
ENSMUSG00000063646.19_37278126_37282643_1	chr5	+	729	3	ISM	ENSMUSG00000063646.19	ENSMUST00000212047.2	1191	6	7255	0	-2193	0	3prime_fragment	FALSE	canonical	3	187	junction_1	1	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	1839	False	NA	17	True	AATAAA	-20	NA	37278125	37282643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_37278369_37280623_37280687_37282220
ENSMUSG00000063646.19_37278274_37282643_1	chr5	+	581	3	ISM	ENSMUSG00000063646.19	ENSMUST00000212047.2	1191	6	7403	0	-2045	0	3prime_fragment	FALSE	canonical	3	187	junction_1	1	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	1987	False	NA	17	True	AATAAA	-20	NA	37278273	37282643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_37278369_37280623_37280687_37282220
ENSMUSG00000063694.6_50542217_50543518_1	chr6	-	449	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	0	2674	0	0	multi-exon	FALSE	canonical	3	4909	junction_2	335	820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACTGCCTTATTTATTA	NA	False	NA	NA	False	AAAAAG	-16	NA	50543518	50542216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_50542366_50542471_50542649_50543395
ENSMUSG00000063698.10_60827196_60839987_1	chr19	-	983	5	NNC	ENSMUSG00000063698.10	novel	1218	13	NA	NA	9875	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	13.7204227340122	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAAGAAATCATCAAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	60839987	60827195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60839617
ENSMUSG00000063714.16_72809768_72818951_1	chr2	+	506	3	NNC	ENSMUSG00000063714.16	novel	583	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	98	666	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATCTCCTGCAAGCTTG	NA	False	NA	20	True	NA	NA	NA	72809767	72818951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_72809933_72817871_72817977_72818715
ENSMUSG00000063765.13_81570366_81578229_1	chr15	-	932	3	FSM	ENSMUSG00000063765.13	ENSMUST00000173898.2	1095	3	179	-16	0	0	multi-exon	FALSE	canonical	3	12	junction_2	12.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTAGCATTAGTGCTAGC	8254	False	NA	NA	False	NA	NA	NA	81578229	81570365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81570604_81576308_81576508_81577734
ENSMUSG00000063765.13_81570366_81578229_2	chr15	-	1099	4	ISM	ENSMUSG00000063765.13	ENSMUST00000072910.6	2548	6	3259	0	0	0	3prime_fragment	FALSE	canonical	3	19	junction_3	7.87400787401181	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTAGCATTAGTGCTAGC	8254	False	NA	NA	False	NA	NA	NA	81578229	81570365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_81570604_81576308_81576508_81577187_81577355_81577734
ENSMUSG00000063785.13_47345774_47355884_1	chrX	+	1176	7	FSM	ENSMUSG00000063785.13	ENSMUST00000125966.8	2138	7	0	962	0	-962	multi-exon	FALSE	canonical	3	18	junction_6	135.426999605774	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTGGTGTTTTGCCTG	NA	False	NA	NA	False	NA	NA	NA	47345773	47355884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47355291
ENSMUSG00000063785.13_47345774_47371330_1	chrX	+	1389	10	NIC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_7	130.820015835536	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTACCTTCTGTATTA	NA	False	NA	20	True	AATAAA	-24	NA	47345773	47371330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47367243_47367438_47367544_47367645_47370938
ENSMUSG00000063800.6_108422070_108436325_1	chr4	-	982	8	NNC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	208	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	189.176302610522	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTGGCTTTTTGTTT	NA	False	NA	-11	True	ATTAAA	-17	NA	108436325	108422069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108434240_108434286_108436181
ENSMUSG00000063800.6_108422070_108436325_2	chr4	-	1305	10	FSM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	208	3	208	0	multi-exon	FALSE	canonical	3	462	junction_7	44.4233283170614	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTGGCTTTTTGTTT	NA	False	NA	-11	True	ATTAAA	-17	NA	108436325	108422069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
ENSMUSG00000063800.6_108422070_108436533_1	chr4	-	1486	9	NIC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	182.781973947105	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTGGCTTTTTGTTT	NA	False	NA	-11	True	ATTAAA	-17	NA	108436533	108422069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_108422465_108424101_108424151_108424619_108424718_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
ENSMUSG00000063800.6_108422070_108436533_2	chr4	-	1190	8	NNC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	189.176302610522	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTGGCTTTTTGTTT	NA	False	NA	-11	True	ATTAAA	-17	NA	108436533	108422069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108434240_108434286_108436181
ENSMUSG00000063802.6_4663520_4687980_1	chr7	-	1419	8	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_7	161.654708864169	1415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTATGCTGTCTTGCATT	NA	False	NA	-7	True	AATAAA	-16	NA	4687980	4663519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687482_4687892
ENSMUSG00000063849.7_57321244_57347377_1	chr9	-	1434	7	FSM	ENSMUSG00000063849.7	ENSMUST00000085709.6	2744	7	2	1308	2	0	multi-exon	FALSE	canonical	3	27	junction_2	42.49607825043	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGTGTCCTTCTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	57347377	57321243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_57322010_57322368_57322538_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
ENSMUSG00000063870.13_125073140_125078909_1	chr6	+	1006	7	ISM	ENSMUSG00000063870.13	ENSMUST00000112392.8	6652	39	196	28639	0	1426	5prime_fragment	FALSE	canonical	3	200	junction_3	12.2848144742469	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGTAGCTCCTCTGAA	1804	False	NA	NA	False	NA	NA	NA	125073139	125078909	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844
ENSMUSG00000063870.13_125073140_125079971_1	chr6	+	1600	10	ISM	ENSMUSG00000063870.13	ENSMUST00000056889.15	6697	39	196	27583	0	2488	5prime_fragment	FALSE	canonical	3	138	junction_8	34.1058627884299	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGCTCTGTCCCCGCTG	1804	False	NA	NA	False	NA	NA	NA	125073139	125079971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755
ENSMUSG00000063882.13_115924162_115932231_1	chr4	-	502	3	NNC	ENSMUSG00000063882.13	novel	579	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	536	6547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCTTCCTTTGCC	7694	False	NA	-7	True	AATAAA	-17	NA	115932231	115924161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_115924370_115927059_115927222_115932099
ENSMUSG00000063882.13_115924162_115932231_2	chr4	-	498	3	NNC	ENSMUSG00000063882.13	novel	579	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCTTCCTTTGCC	7694	False	NA	-7	True	AATAAA	-17	NA	115932231	115924161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_115924358_115927051_115927222_115932099
ENSMUSG00000063882.13_115924162_115932231_3	chr4	-	489	3	NIC	ENSMUSG00000063882.13	novel	579	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	536	2145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCTTCCTTTGCC	7694	False	NA	-7	True	AATAAA	-17	NA	115932231	115924161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_115924370_115927059_115927222_115932112
ENSMUSG00000063884.7_71857624_71885737_2	chr6	-	2573	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	276.510816072281	1942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3045	False	NA	-3	True	AATAAA	-26	NA	71885737	71857623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866354_71866577_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884751_71884831_71885617
ENSMUSG00000063884.7_71857624_71885737_3	chr6	-	2533	23	NIC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	264.585833375751	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3045	False	NA	-3	True	AATAAA	-26	NA	71885737	71857623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866354_71866577_71866671_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ENSMUSG00000063888.8_47085424_47093582_1	chr17	-	2008	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	0	-591	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	841.552335469003	4096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCGTGTGAGTACATG	NA	False	NA	-3	True	AGTAAA	-16	NA	47093582	47085423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091471_47092708_47092818_47093544
ENSMUSG00000063888.8_47085424_47093582_2	chr17	-	2015	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	0	591	0	-591	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	6529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCGTGTGAGTACATG	NA	False	NA	-3	True	AGTAAA	-16	NA	47093582	47085423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ENSMUSG00000063888.8_47085424_47093582_3	chr17	-	2013	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	0	-591	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1085.12617033945	3616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCGTGTGAGTACATG	NA	False	NA	-3	True	AGTAAA	-16	NA	47093582	47085423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_47086663_47088972_47089198_47089335_47089446_47090210_47090349_47091316_47091471_47092708_47092818_47093544
ENSMUSG00000063888.8_47086027_47093582_1	chr17	-	1406	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	0	-1194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	827.181895890432	3067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTGTGTATACCTTTA	NA	False	NA	-3	True	NA	NA	NA	47093582	47086026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092812_47093544
ENSMUSG00000063888.8_47086027_47093582_2	chr17	-	1405	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	0	-1194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	841.552335469003	2163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTGTGTATACCTTTA	NA	False	NA	-3	True	NA	NA	NA	47093582	47086026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091471_47092708_47092818_47093544
ENSMUSG00000063888.8_47086027_47093582_3	chr17	-	1400	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	0	-1194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	841.552335469003	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTGTGTATACCTTTA	NA	False	NA	-3	True	NA	NA	NA	47093582	47086026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091466_47092708_47092818_47093544
ENSMUSG00000063888.8_47086027_47093582_4	chr17	-	1410	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	0	-1194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1085.12617033945	1686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTGTGTATACCTTTA	NA	False	NA	-3	True	NA	NA	NA	47093582	47086026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_47086663_47088972_47089198_47089335_47089446_47090210_47090349_47091316_47091471_47092708_47092818_47093544
ENSMUSG00000063888.8_47086027_47093582_5	chr17	-	1423	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	0	-1194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	847.611873966433	1807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTGTGTATACCTTTA	NA	False	NA	-3	True	NA	NA	NA	47093582	47086026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_47086663_47088966_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ENSMUSG00000063888.8_47086425_47093582_1	chr17	-	1008	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	0	-1592	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	827.181895890432	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTTCTATCTTGGTG	NA	False	NA	-11	True	NA	NA	NA	47093582	47086424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092812_47093544
ENSMUSG00000063888.8_47086425_47093582_2	chr17	-	1014	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	0	1592	0	-1592	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	1245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTTCTATCTTGGTG	NA	False	NA	-11	True	NA	NA	NA	47093582	47086424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ENSMUSG00000063888.8_47086425_47093582_3	chr17	-	1007	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	0	-1592	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	841.552335469003	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTTCTATCTTGGTG	NA	False	NA	-11	True	NA	NA	NA	47093582	47086424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091471_47092708_47092818_47093544
ENSMUSG00000063888.8_47086425_47093582_4	chr17	-	1012	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	0	-1592	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1085.12617033945	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTTCTATCTTGGTG	NA	False	NA	-11	True	NA	NA	NA	47093582	47086424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_47086663_47088972_47089198_47089335_47089446_47090210_47090349_47091316_47091471_47092708_47092818_47093544
ENSMUSG00000063889.17_3294482_3337488_1	chr18	-	1170	5	FSM	ENSMUSG00000063889.17	ENSMUST00000142690.2	1256	5	86	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	27.3072792493137	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTAGTCTTGTGCATTT	-5	True	NA	-6	True	AATAAA	-12	NA	3337488	3294481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
ENSMUSG00000063889.17_3294482_3337533_1	chr18	-	1068	4	FSM	ENSMUSG00000063889.17	ENSMUST00000149803.8	1422	4	56	298	0	0	multi-exon	FALSE	canonical	3	52	junction_2	16.5797734872612	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTAGTCTTGTGCATTT	-12	True	NA	-6	True	AATAAA	-12	NA	3337533	3294481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_3295183_3295321_3295417_3325360_3325479_3337379
ENSMUSG00000063919.12_116576779_116600638_2	chr5	-	513	4	NNC	ENSMUSG00000063919.12	novel	6555	5	NA	NA	5009	555	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	927	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCTCCCCCATCCCAAGC	NA	False	NA	NA	False	NA	NA	NA	116600638	116576778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_116576898_116577427_116577496_116599782_116599924_116600453
ENSMUSG00000063919.12_116576779_116600638_3	chr5	-	585	5	NNC	ENSMUSG00000063919.12	novel	6555	5	NA	NA	5009	555	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	574	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCTCCCCCATCCCAAGC	NA	False	NA	NA	False	NA	NA	NA	116600638	116576778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_116576898_116577427_116577496_116593800_116593934_116599782_116599863_116600453
ENSMUSG00000063931.15_34611804_34680219_1	chr7	+	1020	10	NIC	ENSMUSG00000063931.15	novel	1881	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_9	113.701797547058	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTTTTTGTTTGTTTGTT	NA	False	NA	NA	False	TTTAAA	-30	NA	34611803	34680219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_34611880_34620753_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34668929_34669006_34671081_34671129_34679929
ENSMUSG00000063931.15_34668708_34744132_1	chr7	+	1495	8	ISM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	56904	1	0	0	3prime_fragment	FALSE	canonical	3	314	junction_5	28.3541740079564	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCTGCCCATCTTCCT	8720	False	NA	13	True	AATAAA	-18	NA	34668707	34744132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_34669006_34671081_34671129_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
ENSMUSG00000064023.5_43447468_43453246_1	chr7	+	855	5	FSM	ENSMUSG00000064023.5	ENSMUST00000085461.4	1322	5	467	0	448	0	multi-exon	FALSE	canonical	3	33	junction_4	3.90512483795333	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGACTGTGCTTTGACC	3344	False	NA	28	True	AATAAA	-18	NA	43447467	43453246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43447557_43448047_43448208_43448488_43448752_43451503_43451638_43453037
ENSMUSG00000064030.16_128583758_128602432_1	chr10	+	1309	3	NNC	ENSMUSG00000064030.16	novel	1158	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	127.5	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTCAGGCTTTGGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	128583757	128602432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_128583868_128601015_128601261_128601478
ENSMUSG00000064030.16_128583758_128602432_2	chr10	+	1213	4	NIC	ENSMUSG00000064030.16	novel	1158	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	137.41502424731	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTCAGGCTTTGGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	128583757	128602432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_128583868_128586151_128586207_128601015_128601110_128601478
ENSMUSG00000064032.3_10176502_10181307_1	chr19	+	1581	3	NNC	ENSMUSG00000064032.3	novel	3332	2	NA	NA	-51	1559	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	134	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCGCGAACAGCCTCC	NA	False	NA	NA	False	NA	NA	NA	10176501	10181307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_10177439_10177957_10178462_10181167
ENSMUSG00000064032.3_10176502_10181307_2	chr19	+	2205	2	NIC	ENSMUSG00000064032.3	novel	3332	2	NA	NA	-51	1559	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1568	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCGCGAACAGCCTCC	NA	False	NA	NA	False	NA	NA	NA	10176501	10181307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_10178462_10181062
ENSMUSG00000064032.3_10176502_10181307_3	chr19	+	1003	3	NNC	ENSMUSG00000064032.3	novel	3332	2	NA	NA	-51	1559	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCGCGAACAGCCTCC	NA	False	NA	NA	False	NA	NA	NA	10176501	10181307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_10177234_10178330_10178462_10181167
ENSMUSG00000064032.3_10176502_10181307_4	chr19	+	2216	2	NIC	ENSMUSG00000064032.3	novel	3332	2	NA	NA	-51	1559	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCGCGAACAGCCTCC	NA	False	NA	NA	False	NA	NA	NA	10176501	10181307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_10178462_10181051
ENSMUSG00000064037.14_31652111_31668761_1	chr5	+	1692	15	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	0	558	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	349.787253125353	829	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTAAGCTTTCCTG	NA	False	NA	26	True	GATAAA	-15	NA	31652110	31668761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_31652228_31652861_31652956_31653922_31653984_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ENSMUSG00000064037.14_31652111_31668761_2	chr5	+	1627	13	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	0	558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	285.059447990922	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTAAGCTTTCCTG	NA	False	NA	26	True	GATAAA	-15	NA	31652110	31668761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655785_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ENSMUSG00000064037.14_31652111_31668761_3	chr5	+	1625	14	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	0	558	at_least_one_novel_splicesite	FALSE	canonical	2	40	junction_13	261.674082483893	2032	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTAAGCTTTCCTG	NA	False	NA	26	True	GATAAA	-15	NA	31652110	31668761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668181
ENSMUSG00000064037.14_31654848_31742339_1	chr5	+	191	2	NNC	ENSMUSG00000064037.14	novel	631	3	NA	NA	2503	72091	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1765	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGCCTTGGTCATGGCA	NA	False	NA	NA	False	NA	NA	NA	31654847	31742339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_31654987_31742287
ENSMUSG00000064068.16_89116394_89121214_1	chr3	-	1082	8	NNC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	274.014300237586	1484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGATCAAAGAATCCCTT	NA	False	NA	-22	True	AATAAA	-15	NA	89121214	89116393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117896_89117984_89119989_89120070_89120183_89120254_89121119
ENSMUSG00000064068.16_89116394_89121214_2	chr3	-	1535	7	NIC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	739	junction_1	41.4286535302963	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGATCAAAGAATCCCTT	NA	False	NA	-22	True	AATAAA	-15	NA	89121214	89116393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_89116729_89116811_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
ENSMUSG00000064068.16_89116394_89121214_3	chr3	-	1085	8	FSM	ENSMUSG00000064068.16	ENSMUST00000173477.8	892	8	-67	-126	0	0	multi-exon	FALSE	canonical	1	38	junction_5	268.396143407312	1916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGATCAAAGAATCCCTT	NA	False	NA	-22	True	AATAAA	-15	NA	89121214	89116393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117981_89119989_89120070_89120183_89120254_89121119
ENSMUSG00000064090.15_26337202_26421430_3	chr11	-	1154	13	NIC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	77935	84120	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGCCGCACATGCGCAGT	NA	False	NA	NA	False	NA	NA	NA	26421430	26337201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_26337311_26347745_26347805_26349648_26349710_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ENSMUSG00000064090.15_26337202_26421430_4	chr11	-	1053	12	NIC	ENSMUSG00000064090.15	novel	1642	12	NA	NA	77935	84120	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGCCGCACATGCGCAGT	NA	False	NA	NA	False	NA	NA	NA	26421430	26337201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_26337311_26347745_26347805_26349648_26349710_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ENSMUSG00000064090.15_26337202_26421876_1	chr11	-	1727	14	NIC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	77489	84120	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGCCGCACATGCGCAGT	NA	False	NA	NA	False	NA	NA	NA	26421876	26337201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420806_26420949_26421324
ENSMUSG00000064090.15_26337202_26421876_2	chr11	-	1600	13	NIC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	77489	84120	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGCCGCACATGCGCAGT	NA	False	NA	NA	False	NA	NA	NA	26421876	26337201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_26337311_26347745_26347805_26349648_26349710_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ENSMUSG00000064090.15_26421404_26543622_1	chr11	-	1591	13	FSM	ENSMUSG00000064090.15	ENSMUST00000078362.13	1889	13	298	0	0	0	multi-exon	FALSE	canonical	3	73	junction_12	13.1368332899862	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACTTTTAAGCATTCC	NA	False	NA	-7	True	AATAAA	-28	NA	26543622	26421403	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543589
ENSMUSG00000064145.13_108480141_108526568_1	chr9	-	3959	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	228.429112363114	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108526568	108480140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
ENSMUSG00000064145.13_108481885_108526568_2	chr9	-	2166	15	NNC	ENSMUSG00000064145.13	novel	2160	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	222.231447654311	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTCACCCTTTAGCTA	NA	False	NA	-24	True	AATAAA	-11	NA	108526568	108481884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108487076_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
ENSMUSG00000064145.13_108481885_108526568_3	chr9	-	2215	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	228.429112363114	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTCACCCTTTAGCTA	NA	False	NA	-24	True	AATAAA	-11	NA	108526568	108481884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
ENSMUSG00000064179.14_4507662_4511024_1	chr7	-	683	3	ISM	ENSMUSG00000064179.14	ENSMUST00000086502.5	485	4	0	-123	0	0	intron_retention	FALSE	canonical	3	51	junction_2	3	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTTCTTCAGGGTTGTT	7330	False	NA	-11	True	AATAAA	-19	NA	4511024	4507661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_4507800_4510381_4510423_4510520
ENSMUSG00000064181.7_116742682_116775386_1	chr10	-	1672	10	ISM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	10950	0	10899	0	3prime_fragment	TRUE	canonical	3	251	junction_7	35.4526288008222	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCGTGTGTCTTTCTTA	NA	False	NA	-7	True	AATAAA	-10	NA	116775386	116742681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105
ENSMUSG00000064194.11_42827012_42838930_1	chr7	+	509	4	FSM	ENSMUSG00000064194.11	ENSMUST00000202535.4	3112	4	0	2603	0	4	multi-exon	FALSE	canonical	3	311	junction_1	65.2226954364813	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCTATCTTCGAATGCA	NA	False	NA	NA	False	NA	NA	NA	42827011	42838930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725
ENSMUSG00000064194.11_42827012_42839352_1	chr7	+	968	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	0	274	intron_retention	TRUE	non_canonical	0	0	junction_4	196.935268552893	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAATCTCCGAATACATG	NA	False	NA	10	True	NA	NA	NA	42827011	42839352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838466_42838749_42838970
ENSMUSG00000064194.11_42827012_42839352_2	chr7	+	709	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	0	274	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	195.192782198068	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAATCTCCGAATACATG	NA	False	NA	10	True	NA	NA	NA	42827011	42839352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838947
ENSMUSG00000064194.11_42827012_42839352_3	chr7	+	700	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	0	274	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	195.192782198068	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAATCTCCGAATACATG	NA	False	NA	10	True	NA	NA	NA	42827011	42839352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838956
ENSMUSG00000064194.11_42827012_42841355_1	chr7	+	2878	5	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	0	-178	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	176.4291642558	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCACTCTTTATA	NA	False	NA	6	True	AATAAA	-14	NA	42827011	42841355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725_42838915_42838970
ENSMUSG00000064194.11_42827012_42841355_2	chr7	+	2712	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	0	-178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	195.192782198068	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCACTCTTTATA	NA	False	NA	6	True	AATAAA	-14	NA	42827011	42841355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838947
ENSMUSG00000064194.11_42827012_42841355_3	chr7	+	2934	4	FSM	ENSMUSG00000064194.11	ENSMUST00000202535.4	3112	4	0	178	0	-178	multi-exon	FALSE	canonical	3	311	junction_1	65.2226954364813	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCACTCTTTATA	NA	False	NA	6	True	AATAAA	-14	NA	42827011	42841355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725
ENSMUSG00000064194.11_42827012_42841355_4	chr7	+	2703	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	0	-178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	195.192782198068	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCACTCTTTATA	NA	False	NA	6	True	AATAAA	-14	NA	42827011	42841355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838956
ENSMUSG00000064247.15_110251841_110252475_1	chr5	+	447	3	NIC	ENSMUSG00000064247.15	novel	3177	5	NA	NA	2771	794	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTCTGCATCAGGGTGG	NA	False	NA	NA	False	NA	NA	NA	110251840	110252475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_110252035_110252133_110252287_110252375
ENSMUSG00000064247.15_110251841_110254649_1	chr5	+	1066	7	NIC	ENSMUSG00000064247.15	novel	3314	7	NA	NA	2771	830	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGAGATGGGGGCCACG	NA	False	NA	NA	False	NA	NA	NA	110251840	110254649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518
ENSMUSG00000064254.7_24293333_24308350_1	chr7	+	938	7	ISM	ENSMUSG00000064254.7	ENSMUST00000077191.7	1484	8	6365	0	6365	0	3prime_fragment	FALSE	canonical	3	79	junction_1	14.7384606462894	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGTTCTGCTTGCTTTC	NA	False	NA	9	True	AATAAA	-24	NA	24293332	24308350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_24293437_24293842_24293988_24294424_24294574_24305629_24305760_24307292_24307383_24307776_24307894_24308147
ENSMUSG00000064263.7_71549761_71561310_1	chr2	+	672	4	NNC	ENSMUSG00000064263.7	novel	641	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_1	10.8730042868667	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATCAAGACTCGGTTGCT	NA	False	NA	5	True	ATTAAA	-18	NA	71549760	71561310	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_71549853_71553633_71553841_71560693_71560778_71561021
ENSMUSG00000064263.7_71549761_71561310_2	chr2	+	465	3	NNC	ENSMUSG00000064263.7	novel	641	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	15	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATCAAGACTCGGTTGCT	NA	False	NA	5	True	ATTAAA	-18	NA	71549760	71561310	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_71549853_71560693_71560778_71561021
ENSMUSG00000064264.15_24206778_24215105_1	chr7	+	936	3	FSM	ENSMUSG00000064264.15	ENSMUST00000177205.2	1159	3	223	0	223	0	multi-exon	FALSE	canonical	3	276	junction_2	107	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCGAGCTGCGTGAGT	NA	False	NA	34	True	AATAAA	-28	NA	24206777	24215105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_24206862_24209970_24210179_24214461
ENSMUSG00000064267.14_122379584_122402491_1	chr5	+	2008	13	NNC	ENSMUSG00000064267.14	novel	2790	8	NA	NA	31387	22131	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.86939558874797	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCTAGCGCTAGGTATC	6968	False	NA	NA	False	NA	NA	NA	122379583	122402491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_122379899_122380668_122380789_122383563_122383727_122384547_122384689_122385594_122385681_122385982_122386109_122386911_122387064_122389674_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
ENSMUSG00000064284.13_85691173_85695860_1	chr15	-	1056	5	NNC	ENSMUSG00000064284.13	novel	997	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	139.440623564297	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8123	False	NA	0	True	ATTAAA	-15	NA	85695860	85691172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695743
ENSMUSG00000064284.13_85691173_85695860_2	chr15	-	909	4	NNC	ENSMUSG00000064284.13	novel	997	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	154.740643228166	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8123	False	NA	0	True	ATTAAA	-15	NA	85695860	85691172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_85691740_85692456_85692569_85693412_85693526_85695743
ENSMUSG00000064326.14_112611401_112615579_1	chr12	+	441	3	FSM	ENSMUSG00000064326.14	ENSMUST00000109755.5	333	3	0	-108	0	0	multi-exon	FALSE	canonical	3	90	junction_1	805	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7143	False	NA	17	True	AATAAA	-17	NA	112611400	112615579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_112611519_112614258_112614416_112615413
ENSMUSG00000064326.14_112611401_112615579_2	chr12	+	636	4	FSM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	288	0	0	0	multi-exon	FALSE	canonical	3	1700	junction_3	44.6542271235322	7033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7143	False	NA	17	True	AATAAA	-17	NA	112611400	112615579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_112611519_112613271_112613467_112614258_112614416_112615413
ENSMUSG00000064373.14_3309983_3333038_1	chr15	+	954	9	NIC	ENSMUSG00000064373.14	novel	2013	5	NA	NA	8416	23048	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAGATTTTAGTCCTCT	6694	False	NA	NA	False	NA	NA	NA	3309982	3333038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_3310232_3310504_3310589_3312299_3312428_3319606_3319710_3321861_3321927_3323334_3323404_3327582_3327689_3330586_3330676_3332977
ENSMUSG00000065952.14_3617990_3623836_2	chr8	+	823	2	FSM	ENSMUSG00000065952.14	ENSMUST00000138454.2	637	2	0	-186	0	186	multi-exon	FALSE	canonical	3	29	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTGCCTCTGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	3617989	3623836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_3618097_3623120
ENSMUSG00000065952.14_3617990_3628597_1	chr8	+	730	4	NNC	ENSMUSG00000065952.14	novel	960	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	10.3387082795139	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATCTGTTTATTTAT	NA	False	NA	24	True	ATTAAA	-44	NA	3617989	3628597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_3618097_3623120_3623222_3627840_3628046_3628280
ENSMUSG00000065952.14_3617990_3630525_1	chr8	+	637	4	NIC	ENSMUSG00000065952.14	novel	1621	6	NA	NA	0	1928	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	1.24721912892465	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGCGATATTCTCACAT	NA	False	NA	NA	False	ATTAAA	-1	NA	3617989	3630525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_3618097_3627840_3628046_3629722_3629922_3630399
ENSMUSG00000065952.14_3617990_3630525_2	chr8	+	738	5	ISM	ENSMUSG00000065952.14	ENSMUST00000136592.2	1621	6	-8	4251	0	1928	5prime_fragment	FALSE	canonical	3	9	junction_4	8.46684711093805	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGCGATATTCTCACAT	NA	False	NA	NA	False	ATTAAA	-1	NA	3617989	3630525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_3618097_3623120_3623222_3627840_3628046_3629722_3629922_3630399
ENSMUSG00000065990.13_155916116_155917521_1	chr4	+	785	4	FSM	ENSMUSG00000065990.13	ENSMUST00000084097.12	1159	4	308	66	0	3	multi-exon	FALSE	canonical	3	1785	junction_1	303.738191357111	8410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGGCCGACCTAGAGTT	NA	False	NA	30	True	AATAAA	-20	NA	155916115	155917521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155916193_155916439_155916528_155916808_155917255_155917347
ENSMUSG00000065990.13_155916116_155917521_2	chr4	+	875	4	NIC	ENSMUSG00000065990.13	novel	1029	3	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	1100.13494121807	7876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGGCCGACCTAGAGTT	NA	False	NA	30	True	AATAAA	-20	NA	155916115	155917521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_155916193_155916349_155916528_155916808_155917255_155917347
ENSMUSG00000065999.14_147449042_147669655_1	chr4	+	2560	5	NNC	ENSMUSG00000065999.14	novel	628	4	NA	NA	-188692	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	48.1300322044355	2165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	5651	False	NA	NA	False	NA	NA	NA	147449041	147669655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147449174_147661481_147661587_147665698_147665826_147667290_147668023_147668191
ENSMUSG00000065999.14_147576867_147666757_1	chr4	+	426	4	Fusion	ENSMUSG00000078496.10_ENSMUSG00000065999.14	novel	1488	4	NA	NA	-7	-641	multi-exon	FALSE	canonical	1	1	junction_3	37.8182789431542	214	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTACTTCCATGTGTAC	NA	False	NA	NA	False	NA	NA	NA	147576866	147666757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_147577009_147661528_147661587_147665698_147665826_147666658
ENSMUSG00000065999.14_147576867_147669655_1	chr4	+	2692	4	Fusion	ENSMUSG00000078496.10_ENSMUSG00000065999.14	novel	1488	4	NA	NA	-7	0	multi-exon	FALSE	canonical	3	27	junction_1	32.782108941718	3008	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147576866	147669655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_147577009_147661528_147661587_147665698_147665826_147667290
ENSMUSG00000065999.14_147637734_147669655_1	chr4	+	2747	4	NIC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	33.2498955721	3282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147637733	147669655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_147637884_147661481_147661587_147665698_147665826_147667290
ENSMUSG00000065999.14_147637734_147669655_2	chr4	+	2682	4	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_1	19.9053315024448	2552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147637733	147669655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147637884_147661528_147661587_147665716_147665826_147667290
ENSMUSG00000065999.14_147637734_147669655_3	chr4	+	2762	5	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	36.1731944953718	2380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147637733	147669655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147637884_147646898_147646979_147661528_147661587_147665716_147665826_147667290
ENSMUSG00000065999.14_147637734_147669655_4	chr4	+	2700	4	FSM	ENSMUSG00000065999.14	ENSMUST00000139784.8	628	4	0	-2072	0	0	multi-exon	FALSE	canonical	3	55	junction_1	19.7540431867054	3216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147637733	147669655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_147637884_147661528_147661587_147665698_147665826_147667290
ENSMUSG00000065999.14_147668169_147669655_1	chr4	+	1318	2	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	30373	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147668168	147669655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147668408_147668576
ENSMUSG00000066000.13_147696394_147723694_1	chr4	-	2461	4	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	3259	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	219.606213229246	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	147723694	147696393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147723554
ENSMUSG00000066000.13_147696394_147726970_1	chr4	-	2624	5	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	198.757861479741	2939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	147726970	147696393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726761
ENSMUSG00000066000.13_147696394_147726970_2	chr4	-	2641	5	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	233.355281705814	2760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	147726970	147696393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147725321_147725463_147726791
ENSMUSG00000066000.13_147698127_147726970_1	chr4	-	861	5	FSM	ENSMUSG00000066000.13	ENSMUST00000105720.8	2594	5	0	1733	0	241	multi-exon	FALSE	canonical	3	24	junction_4	194.219592214586	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAGTGAAATGAACACTT	NA	False	NA	NA	False	CATAAA	-18	NA	147726970	147698126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726791
ENSMUSG00000066000.13_147698127_147726970_2	chr4	-	832	5	FSM	ENSMUSG00000066000.13	ENSMUST00000133006.2	574	5	-17	-241	0	241	multi-exon	FALSE	canonical	3	23	junction_4	194.56666595283	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAGTGAAATGAACACTT	NA	False	NA	NA	False	CATAAA	-18	NA	147726970	147698126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726820
ENSMUSG00000066000.13_147698127_147787056_1	chr4	-	830	5	Fusion	ENSMUSG00000066000.13_ENSMUSG00000062518.8	novel	2594	5	NA	NA	-46	241	multi-exon	FALSE	canonical	3	53	junction_4	184.312743726526	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAGTGAAATGAACACTT	NA	False	NA	NA	False	CATAAA	-18	NA	147787056	147698126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147786908
ENSMUSG00000066000.13_147698127_147787056_2	chr4	-	859	5	Fusion	ENSMUSG00000066000.13_ENSMUSG00000062518.8	novel	2594	5	NA	NA	-46	241	multi-exon	FALSE	canonical	2	15	junction_4	197.355485102391	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAGTGAAATGAACACTT	NA	False	NA	NA	False	CATAAA	-18	NA	147787056	147698126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147786879
ENSMUSG00000066000.13_147698244_147726970_1	chr4	-	715	5	FSM	ENSMUSG00000066000.13	ENSMUST00000133006.2	574	5	-17	-124	0	124	multi-exon	FALSE	canonical	3	23	junction_4	194.56666595283	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTTCTACCATTAGTC	NA	False	NA	NA	False	TATAAA	-21	NA	147726970	147698243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726820
ENSMUSG00000066000.13_147698244_147726970_2	chr4	-	744	5	FSM	ENSMUSG00000066000.13	ENSMUST00000105720.8	2594	5	0	1850	0	124	multi-exon	FALSE	canonical	3	24	junction_4	194.219592214586	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTTCTACCATTAGTC	NA	False	NA	NA	False	TATAAA	-21	NA	147726970	147698243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726791
ENSMUSG00000066007.16_146033880_146131797_1	chr4	+	778	6	Fusion	ENSMUSG00000066007.16_ENSMUSG00000066009.9	novel	410	4	NA	NA	-2	58	multi-exon	FALSE	canonical	1	2	junction_1	190.354826573954	319	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCTTCTATCATTAGTC	NA	False	NA	NA	False	TATAAA	-21	NA	146033879	146131797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_146034017_146094927_146095022_146102109_146102186_146126784_146126867_146129876_146130004_146131535
ENSMUSG00000066007.16_146038216_146131797_1	chr4	+	778	6	NNC	ENSMUSG00000066007.16	novel	724	2	NA	NA	-55178	58	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	188.988253603233	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCTTCTATCATTAGTC	NA	False	NA	NA	False	TATAAA	-21	NA	146038215	146131797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146038353_146094927_146095022_146102109_146102186_146126784_146126867_146129876_146130004_146131535
ENSMUSG00000066007.16_146038216_146131797_2	chr4	+	702	5	NNC	ENSMUSG00000066007.16	novel	724	2	NA	NA	-55178	58	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	207.550445675262	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCTTCTATCATTAGTC	NA	False	NA	NA	False	TATAAA	-21	NA	146038215	146131797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146038353_146094927_146095022_146126784_146126867_146129876_146130004_146131535
ENSMUSG00000066007.16_146093394_146132791_1	chr4	+	1632	6	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	0	1052	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	199.487944497907	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCCTCTCAGTATTCA	NA	False	NA	NA	False	NA	NA	NA	146093393	146132791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146093548_146094927_146095022_146126781_146126867_146129876_146130004_146131535_146132073_146132156
ENSMUSG00000066007.16_146093394_146135325_1	chr4	+	3998	6	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	199.487944497907	4693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146093393	146135325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146093548_146094927_146095022_146126781_146126867_146129876_146130004_146131535_146133333_146133584
ENSMUSG00000066009.9_146033868_146063194_1	chr4	+	2721	3	NIC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	3	72	junction_2	50	1478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033867	146063194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_146034017_146054375_146054480_146060726
ENSMUSG00000066009.9_146033868_146063194_2	chr4	+	2679	5	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	0	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	82.8322853723112	1824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033867	146063194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146034017_146054375_146054480_146058453_146058581_146060726_146061381_146061549
ENSMUSG00000066009.9_146038205_146063194_1	chr4	+	2720	3	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4290	3	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	19.5	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146038204	146063194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146038353_146054375_146054480_146060726
ENSMUSG00000066009.9_146038205_146063194_2	chr4	+	2847	4	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4290	3	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	76.4852927038918	1894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146038204	146063194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146038353_146054375_146054480_146058453_146058581_146060726
ENSMUSG00000066026.15_144620251_144654209_1	chr4	+	1163	6	FSM	ENSMUSG00000066026.15	ENSMUST00000154208.8	2337	6	604	570	462	0	multi-exon	FALSE	canonical	3	137	junction_1	25.4982352330509	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCCTTCGTTCACGT	6550	False	NA	6	True	AATAAA	-13	NA	144620250	144654209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_144620280_144645220_144645365_144645954_144646075_144646410_144646650_144650475_144650602_144653704
ENSMUSG00000066036.15_139199866_139216844_1	chr4	+	2025	12	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	91896	-3	-4498	3	3prime_fragment	FALSE	canonical	3	267	junction_2	50.4513512502411	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTCTAGCTGCTGCTTGC	585	False	NA	25	True	AATAAA	-26	NA	139199865	139216844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ENSMUSG00000066037.15_136038279_136067193_1	chr4	+	1718	10	FSM	ENSMUSG00000066037.15	ENSMUST00000131671.8	2543	10	26	799	0	609	multi-exon	FALSE	canonical	3	289	junction_1	97.5394823509124	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAGACCAACAACCAACAG	NA	False	NA	NA	False	NA	NA	NA	136038278	136067193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUSG00000066037.15_136038279_136067193_3	chr4	+	1884	11	FSM	ENSMUSG00000066037.15	ENSMUST00000105850.8	2683	11	0	799	0	609	multi-exon	FALSE	canonical	3	160	junction_1	130.381325349914	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAGACCAACAACCAACAG	NA	False	NA	NA	False	NA	NA	NA	136038278	136067193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_136038401_136041400_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUSG00000066037.15_136038279_136067992_1	chr4	+	2522	10	FSM	ENSMUSG00000066037.15	ENSMUST00000084219.12	2647	10	-57	182	0	0	multi-exon	FALSE	canonical	3	84	junction_2	166.354225660371	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038278	136067992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_136038401_136043671_136043796_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUSG00000066042.5_132186042_132191232_2	chr4	-	1649	4	NNC	ENSMUSG00000066042.5	novel	1675	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.055542912051	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTGATTCTGATTCT	1047	False	NA	-15	True	AATAAA	-13	NA	132191232	132186041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_132186186_132186211_132187425_132190175_132190320_132191084
ENSMUSG00000066042.5_132186042_132191232_3	chr4	-	1623	5	NNC	ENSMUSG00000066042.5	novel	1675	3	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	129.389673080969	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTGATTCTGATTCT	1047	False	NA	-15	True	AATAAA	-13	NA	132191232	132186041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_132186178_132186201_132186367_132186394_132187425_132190175_132190320_132191084
ENSMUSG00000066042.5_132186042_132191232_4	chr4	-	1621	5	NNC	ENSMUSG00000066042.5	novel	1675	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	129.389673080969	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTGATTCTGATTCT	1047	False	NA	-15	True	AATAAA	-13	NA	132191232	132186041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_132186186_132186211_132186367_132186394_132187425_132190175_132190320_132191084
ENSMUSG00000066057.8_95057540_95082560_1	chr17	-	1266	10	NIC	ENSMUSG00000066057.8	novel	1909	5	NA	NA	-10591	9832	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAAGTTTCCGCCCGCGC	NA	False	NA	NA	False	NA	NA	NA	95082560	95057539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_95057661_95062638_95062734_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95071353_95074284_95074376_95078561_95078667_95079284_95079389_95082319
ENSMUSG00000066057.8_95057540_95082560_2	chr17	-	1224	10	NNC	ENSMUSG00000066057.8	novel	1909	5	NA	NA	-10591	9832	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	218	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAAGTTTCCGCCCGCGC	NA	False	NA	NA	False	NA	NA	NA	95082560	95057539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_95057661_95062638_95062734_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95071311_95074284_95074376_95078561_95078667_95079284_95079389_95082319
ENSMUSG00000066057.8_95057540_95082560_3	chr17	-	1287	10	NIC	ENSMUSG00000066057.8	novel	1909	5	NA	NA	-10591	9832	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAAGTTTCCGCCCGCGC	NA	False	NA	NA	False	NA	NA	NA	95082560	95057539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_95057661_95062638_95062734_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95071353_95074284_95074376_95078540_95078667_95079284_95079389_95082319
ENSMUSG00000066057.8_95126267_95142226_1	chr17	-	274	3	ISM	ENSMUSG00000066057.8	ENSMUST00000234189.2	1909	5	0	58895	0	14219	5prime_fragment	FALSE	canonical	3	15	junction_2	22	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAACCTTATGAATGTAA	NA	False	NA	NA	False	NA	NA	NA	95142226	95126266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_95126373_95127763_95127825_95142119
ENSMUSG00000066149.12_62312042_62326862_1	chr4	-	1580	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	17	-778	0	778	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	1754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGACTCTTTATTATTG	2681	False	NA	NA	False	AATAAA	-22	NA	62326862	62312041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
ENSMUSG00000066150.13_62278964_62307758_1	chr4	+	1470	5	FSM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	0	2248	0	-2248	multi-exon	FALSE	canonical	3	753	junction_3	40.1932830209228	1368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGACTCAGTACCTTGGT	NA	False	NA	13	True	AATAAA	-16	NA	62278963	62307758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834
ENSMUSG00000066232.5_109617522_109645754_1	chr7	+	1831	13	ISM	ENSMUSG00000066232.5	ENSMUST00000207277.2	3784	21	0	5434	0	-2822	5prime_fragment	FALSE	canonical	0	0	junction_2	227.520496634674	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTGAAAGAGCTTAGT	7239	False	NA	NA	False	NA	NA	NA	109617521	109645754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368
ENSMUSG00000066232.5_109617522_109655324_1	chr7	+	3414	26	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	233.88532574747	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTTGATCTGATTGC	7239	False	NA	23	True	ATTAAA	-18	NA	109617521	109655324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223_109654345_109655160
ENSMUSG00000066306.14_101663041_101664166_1	chr7	+	832	2	ISM	ENSMUSG00000066306.14	ENSMUST00000163183.2	2934	13	12669	-4	12419	4	3prime_fragment	FALSE	canonical	3	398	junction_1	0	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	NA	False	NA	32	True	AATAAA	-20	NA	101663040	101664166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_101663149_101663442
ENSMUSG00000066357.7_108447085_108449972_1	chr9	-	1890	10	NIC	ENSMUSG00000066357.7	novel	4163	6	NA	NA	5966	2425	intron_retention	TRUE	non_canonical	0	0	junction_1	0	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTAAGTTATCCGTAGA	2804	False	NA	NA	False	ACTAAA	-8	NA	108449972	108447084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449497_108449591_108449661_108449749
ENSMUSG00000066438.7_80768506_80770988_1	chr12	+	2260	2	FSM	ENSMUSG00000066438.7	ENSMUST00000153762.2	956	2	0	-1304	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTACTGGTTTCCTTTGTT	NA	False	NA	4	True	CATAAA	-5	NA	80768505	80770988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_80768870_80769092
ENSMUSG00000066441.15_79221111_79238626_1	chr12	-	2821	7	FSM	ENSMUSG00000066441.15	ENSMUST00000161204.8	3262	7	441	0	-59	0	multi-exon	FALSE	canonical	3	91	junction_5	13.7113092008021	490	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTATGGGGATATTGGA	NA	False	NA	-18	True	AATAAA	-40	NA	79238626	79221110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79235762_79235882_79238499
ENSMUSG00000066442.18_89093453_89122279_1	chr9	+	729	3	NIC	ENSMUSG00000066442.18	novel	1406	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	155	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCAATAGAAATTATTA	NA	False	NA	NA	False	AATAAA	-21	NA	89093452	89122279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_89093535_89097261_89097524_89121894
ENSMUSG00000066442.18_89093453_89122279_2	chr9	+	799	4	FSM	ENSMUSG00000066442.18	ENSMUST00000117314.8	705	4	17	-111	0	0	multi-exon	FALSE	canonical	3	32	junction_1	167.420296127905	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCAATAGAAATTATTA	NA	False	NA	NA	False	AATAAA	-21	NA	89093452	89122279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_89093535_89096464_89096535_89097261_89097524_89121894
ENSMUSG00000066443.6_88272890_88273430_1	chr9	+	431	2	Genic_Genomic	ENSMUSG00000066443.6	novel	481	1	NA	NA	0	60	multi-exon	FALSE	non_canonical	0	0	junction_1	0	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTATAAGCTACACTGT	NA	False	NA	NA	False	NA	NA	NA	88272889	88273430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_88273183_88273292
ENSMUSG00000066443.6_88272890_88273430_2	chr9	+	419	2	Genic_Genomic	ENSMUSG00000066443.6	novel	481	1	NA	NA	0	60	multi-exon	FALSE	non_canonical	0	0	junction_1	0	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTATAAGCTACACTGT	NA	False	NA	NA	False	NA	NA	NA	88272889	88273430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_88273183_88273304
ENSMUSG00000066443.6_88272890_88273430_3	chr9	+	412	2	Genic_Genomic	ENSMUSG00000066443.6	novel	481	1	NA	NA	0	60	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTATAAGCTACACTGT	NA	False	NA	NA	False	NA	NA	NA	88272889	88273430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_88272988_88273116
ENSMUSG00000066443.6_88272890_88273430_4	chr9	+	436	2	Genic_Genomic	ENSMUSG00000066443.6	novel	481	1	NA	NA	0	60	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTATAAGCTACACTGT	NA	False	NA	NA	False	NA	NA	NA	88272889	88273430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_88272988_88273092
ENSMUSG00000066456.15_82992001_83028619_1	chr9	-	864	6	FSM	ENSMUSG00000066456.15	ENSMUST00000162246.9	983	6	119	0	-36	0	multi-exon	FALSE	canonical	3	19	junction_1	12.1556571192182	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCCACCTGTTTGTG	NA	False	NA	-6	True	AATAAA	-18	NA	83028619	82992000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_82992483_82993045_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
ENSMUSG00000066551.13_148984037_148989850_1	chr5	-	2313	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	0	525	0	-525	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	27345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGTTAAATGACTTTCA	6764	False	NA	-7	True	AATAAA	-24	NA	148989850	148984036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
ENSMUSG00000066551.13_148985038_148989850_1	chr5	-	1302	5	NNC	ENSMUSG00000066551.13	novel	2838	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3456.5444720848	24249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTGTCCTTTTCATA	6764	False	NA	NA	False	AGTAAA	-18	NA	148989850	148985037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_148985724_148986546_148986712_148987104_148987251_148987397_148987562_148989709
ENSMUSG00000066551.13_148985455_148989850_1	chr5	-	895	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	0	1943	0	0	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	6547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTGTGTAAGATTTGTT	6764	False	NA	NA	False	AAGAAA	-14	NA	148989850	148985454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
ENSMUSG00000066571.14_33957074_34012948_1	chr7	-	1702	5	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	-1	-3607	combination_of_known_junctions	FALSE	canonical	3	60	junction_4	27.3130005674953	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGCAAGTTTGCAGGTA	9836	False	NA	NA	False	AATGAA	-30	NA	34012948	33957073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012916
ENSMUSG00000066637.3_9080028_9086183_1	chr12	+	758	3	FSM	ENSMUSG00000066637.3	ENSMUST00000085741.2	1000	3	31	211	0	-211	multi-exon	FALSE	canonical	3	121	junction_2	13	402	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTATTCCCAACTTTG	NA	False	NA	17	True	AGTAAA	-19	NA	9080027	9086183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_9080197_9084921_9085089_9085761
ENSMUSG00000066652.6_180720673_180726009_1	chr1	+	1814	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	0	659	0	-659	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTATTCTGTGTGCTCTT	NA	False	NA	10	True	NA	NA	NA	180720672	180726009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
ENSMUSG00000066652.6_180720673_180726982_1	chr1	+	2787	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	0	-314	0	314	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGTGTCTGTTTATT	NA	False	NA	24	True	NA	NA	NA	180720672	180726982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
ENSMUSG00000066652.6_180722023_180726668_1	chr1	+	2038	2	FSM	ENSMUSG00000066652.6	ENSMUST00000155546.2	422	2	0	-1616	0	0	multi-exon	FALSE	canonical	3	1148	junction_1	0	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGAGCGAGTCATCGA	NA	False	NA	21	True	AATAAA	-19	NA	180722022	180726668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180722407_180725014
ENSMUSG00000066705.8_45281740_45306459_1	chr9	+	534	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	257	998	0	-994	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCTCTGGACCCTGTC	625	False	NA	NA	False	NA	NA	NA	45281739	45306459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ENSMUSG00000066705.8_45281740_45307457_1	chr9	+	1520	7	NNC	ENSMUSG00000066705.8	novel	1789	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	385.118776771819	5157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGAGTGGCTTTTCTTCT	625	False	NA	22	True	AATAAA	-26	NA	45281739	45307457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_45281787_45301285_45301370_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ENSMUSG00000066705.8_45281740_45307457_2	chr9	+	1532	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	257	0	0	0	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	5285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGAGTGGCTTTTCTTCT	625	False	NA	22	True	AATAAA	-26	NA	45281739	45307457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ENSMUSG00000066735.9_129970950_130011732_1	chr5	+	1118	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	139	1855	0	312	multi-exon	FALSE	canonical	3	775	junction_1	60.5	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGCAGAACTTACTGTA	NA	False	NA	NA	False	AATAAA	-21	NA	129970949	130011732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129971207_130007359_130007470_130010981
ENSMUSG00000066829.8_22189986_22218973_1	chr9	-	1335	8	FSM	ENSMUSG00000066829.8	ENSMUST00000086278.7	3238	8	-39	1942	-29	377	multi-exon	FALSE	canonical	3	16	junction_6	8.19407451411428	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCGCTGTACATCACAG	NA	False	NA	NA	False	NA	NA	NA	22218973	22189985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22218844
ENSMUSG00000066839.13_21982298_21997418_1	chr9	-	1370	3	Fusion	ENSMUSG00000066839.13_ENSMUSG00000038895.17	novel	2892	3	NA	NA	-684	1244	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGGAGGGACGAAAAGGGC	5201	False	NA	NA	False	NA	NA	NA	21997418	21982297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr9_-_21982386_21987545_21987648_21996238
ENSMUSG00000066861.15_121014785_121025186_1	chr5	-	2256	6	ISM	ENSMUSG00000066861.15	ENSMUST00000086368.12	1977	7	459	580	459	0	3prime_fragment	FALSE	canonical	3	61	junction_5	127.706851813049	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121025186	121014784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121017396_121019947_121020133_121023835
ENSMUSG00000066861.15_121014785_121025653_1	chr5	-	1405	7	FSM	ENSMUSG00000066861.15	ENSMUST00000086368.12	1977	7	-8	580	-8	0	multi-exon	FALSE	canonical	3	61	junction_5	116.597241248096	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121025653	121014784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121017396_121019947_121020133_121023835_121024125_121025442
ENSMUSG00000066880.16_72676696_72688474_1	chr8	+	2860	3	NIC	ENSMUSG00000066880.16	novel	2920	4	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	30	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTTCTATTGCTGTG	NA	False	NA	30	True	AATAAA	-18	NA	72676695	72688474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_72676817_72682045_72682173_72685862
ENSMUSG00000066892.15_20549085_20553809_1	chr9	-	1793	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086459.6	2086	3	293	0	-200	0	multi-exon	TRUE	canonical	3	69	junction_2	12	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	False	NA	-4	True	ATTAAA	-18	NA	20553809	20549084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20550495_20553319_20553393_20553499
ENSMUSG00000066892.15_20549085_20556051_1	chr9	-	1971	2	NIC	ENSMUSG00000066892.15	novel	2056	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	False	NA	-4	True	ATTAAA	-18	NA	20556051	20549084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_20550495_20555490
ENSMUSG00000066892.15_20549085_20556051_2	chr9	-	1770	4	FSM	ENSMUSG00000066892.15	ENSMUST00000131343.8	761	4	3	-1012	0	0	multi-exon	FALSE	canonical	3	9	junction_3	34.3446583263767	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	False	NA	-4	True	ATTAAA	-18	NA	20556051	20549084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20550495_20553319_20553393_20555490_20555595_20555868
ENSMUSG00000066979.7_131161951_131172906_1	chr7	+	1334	8	NNC	ENSMUSG00000066979.7	novel	2218	8	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	485.934697888765	755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGTGTTTGTAAACATT	NA	False	NA	29	True	AATAAA	-24	NA	131161950	131172906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_131162015_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ENSMUSG00000066979.7_131162109_131172906_1	chr7	+	1410	9	FSM	ENSMUSG00000066979.7	ENSMUST00000207736.2	2128	9	0	718	0	13	multi-exon	FALSE	canonical	3	44	junction_4	579.695609781547	2439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGTGTTTGTAAACATT	NA	False	NA	29	True	AATAAA	-24	NA	131162108	131172906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131164026_131164092_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ENSMUSG00000066979.7_131162109_131172906_2	chr7	+	1351	8	NNC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	482.455750323704	4638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGTGTTTGTAAACATT	NA	False	NA	29	True	AATAAA	-24	NA	131162108	131172906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_131162190_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ENSMUSG00000066979.7_131162109_131172906_3	chr7	+	1350	8	NNC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	488.933074173151	4618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGTGTTTGTAAACATT	NA	False	NA	29	True	AATAAA	-24	NA	131162108	131172906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170096_131170233_131170451_131172607
ENSMUSG00000067144.8_46743109_46744692_1	chr17	-	734	3	ISM	ENSMUSG00000067144.8	ENSMUST00000233715.2	1410	10	3863	-230	3863	0	3prime_fragment	FALSE	canonical	3	32	junction_1	4.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCTAGTAGCCAGGACT	7508	False	NA	NA	False	NA	NA	NA	46744692	46743108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_46743444_46743872_46744080_46744500
ENSMUSG00000067148.16_46554846_46558911_1	chr17	-	1239	9	NNC	ENSMUSG00000067148.16	novel	1314	9	NA	NA	-17	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	250.833610188109	4484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTTTTTTTTGTCTA	NA	False	NA	2	True	AATAAA	-25	NA	46558911	46554845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_46555147_46555231_46555349_46555451_46555596_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
ENSMUSG00000067150.7_46513708_46553133_1	chr17	+	3690	32	FSM	ENSMUSG00000067150.7	ENSMUST00000087031.7	5081	32	0	1391	0	-1388	multi-exon	FALSE	canonical	0	0	junction_23	77.9414252168146	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTGGAGACAGAAGTGC	NA	False	NA	-78	True	NA	NA	NA	46513707	46553133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546928_46547838_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ENSMUSG00000067150.7_46513743_46520430_1	chr17	+	1972	5	FSM	ENSMUSG00000067150.7	ENSMUST00000233340.2	2137	5	0	165	0	-165	multi-exon	FALSE	canonical	3	272	junction_2	19.3180614969515	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATGTGGTGTAGTGGT	NA	False	NA	NA	False	NA	NA	NA	46513742	46520430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000
ENSMUSG00000067150.7_46513743_46553218_1	chr17	+	3740	32	FSM	ENSMUSG00000067150.7	ENSMUST00000087031.7	5081	32	35	1306	0	-1303	multi-exon	FALSE	canonical	0	0	junction_23	77.9414252168146	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCCTCGGTTGTCATC	NA	False	NA	7	True	NA	NA	NA	46513742	46553218	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546928_46547838_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ENSMUSG00000067194.7_158155174_158168560_1	chrX	+	808	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	0	4364	0	-4364	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	2995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATACGCTAAGTCCACTT	5347	False	NA	25	True	NA	NA	NA	158155173	158168560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ENSMUSG00000067194.7_158155174_158168560_2	chrX	+	802	7	NNC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	0	-4364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	961.903956859635	1641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATACGCTAAGTCCACTT	5347	False	NA	25	True	NA	NA	NA	158155173	158168560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_158155412_158159382_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ENSMUSG00000067194.7_158155174_158168700_1	chrX	+	942	7	NNC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	0	-4224	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	961.903956859635	11841	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGACTAAGCCCTGCCTT	5347	False	NA	14	True	AATAAA	-26	NA	158155173	158168700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_158155412_158159382_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ENSMUSG00000067194.7_158155174_158169458_1	chrX	+	1706	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	0	3466	0	-3466	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	13220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAGATTGTTTTAAT	5347	False	NA	NA	False	NA	NA	NA	158155173	158169458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ENSMUSG00000067203.9_34193633_34197801_1	chr17	-	1506	6	FSM	ENSMUSG00000067203.9	ENSMUST00000174250.4	1052	6	-37	-417	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.338094023943	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGGAGAACCTTCCAGAA	3644	False	NA	NA	False	AATAAA	-5	NA	34197801	34193632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34194083_34194453_34194588_34194714_34194990_34196744_34197021_34197227_34197498_34197700
ENSMUSG00000067274.11_115697596_115701574_1	chr5	+	1076	7	FSM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	70	212	0	-212	multi-exon	FALSE	canonical	3	6763	junction_6	6310.78692266926	167037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGTCTGGATTTATTTA	NA	False	NA	25	True	AATAAA	-19	NA	115697595	115701574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ENSMUSG00000067288.14_34042026_34043469_1	chr17	-	389	3	ISM	ENSMUSG00000067288.14	ENSMUST00000173019.8	437	4	-3	4025	-1	0	5prime_fragment	FALSE	canonical	3	16929	junction_2	2573.5	182539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTGTCTAGAAATTGG	NA	False	NA	-27	True	AATAAA	-12	NA	34043469	34042025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_34042305_34043272_34043321_34043407
ENSMUSG00000067338.7_145561743_145567205_1	chr6	+	1515	5	FSM	ENSMUSG00000067338.7	ENSMUST00000087445.7	1775	5	260	0	260	0	multi-exon	FALSE	canonical	3	1181	junction_3	43.6312674580971	3783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCTTCCCTGTGTGCT	NA	False	NA	16	True	AATAAA	-36	NA	145561742	145567205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_145561816_145563958_145564182_145564457_145564607_145564908_145565590_145566816
ENSMUSG00000067360.13_134203065_134211986_1	chrX	+	2274	5	FSM	ENSMUSG00000067360.13	ENSMUST00000113176.3	3673	5	0	1399	0	-1399	multi-exon	FALSE	canonical	3	77	junction_4	43.9964487203229	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCCAGCTCTTAGTACA	NA	False	NA	NA	False	NA	NA	NA	134203064	134211986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_134203188_134203385_134203513_134208081_134208382_134209685_134210271_134210847
ENSMUSG00000067360.13_134203065_134213562_1	chrX	+	3850	5	FSM	ENSMUSG00000067360.13	ENSMUST00000118821.8	3698	5	9	-161	0	161	multi-exon	FALSE	canonical	3	77	junction_4	43.9964487203229	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134203064	134213562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_134203188_134203385_134203513_134208081_134208382_134209685_134210271_134210847
ENSMUSG00000067365.12_38417715_38426576_1	chr5	+	703	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	186	402	0	-402	multi-exon	FALSE	canonical	3	200	junction_4	19.5751756058534	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGATTGCTTCTCAGCA	NA	False	NA	NA	False	AATAAA	-26	NA	38417714	38426576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
ENSMUSG00000067365.12_38417715_38426978_1	chr5	+	1098	5	NNC	ENSMUSG00000067365.12	novel	1291	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	102.75304131752	1152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTAATGCAAATTTGG	NA	False	NA	NA	False	AATAAA	-25	NA	38417714	38426978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426409
ENSMUSG00000067365.12_38417715_38426978_2	chr5	+	1105	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	186	0	0	0	multi-exon	FALSE	canonical	3	200	junction_4	19.5751756058534	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTAATGCAAATTTGG	NA	False	NA	NA	False	AATAAA	-25	NA	38417714	38426978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
ENSMUSG00000067377.13_132791817_132799070_1	chrX	-	1657	8	FSM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	108	0	-27	0	multi-exon	FALSE	canonical	3	78	junction_3	4.33777898591114	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCGTTTTAATTTTTAGA	NA	False	NA	4	True	AATAAA	-42	NA	132799070	132791816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_132792673_132793410_132793516_132795247_132795332_132795676_132795812_132796183_132796283_132797431_132797507_132797872_132798062_132798956
ENSMUSG00000067377.13_132792487_132799070_1	chrX	-	987	8	FSM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	108	670	-27	-670	multi-exon	FALSE	canonical	3	78	junction_3	4.33777898591114	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTGTTTCCCTTGGATT	NA	False	NA	NA	False	AGTAAA	-16	NA	132799070	132792486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_132792673_132793410_132793516_132795247_132795332_132795676_132795812_132796183_132796283_132797431_132797507_132797872_132798062_132798956
ENSMUSG00000067389.4_45896128_45906467_1	chr17	+	2056	14	NNC	ENSMUSG00000067389.4	novel	811	2	NA	NA	-918	7164	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCCGAGCGCTTTCAAAC	NA	False	NA	NA	False	NA	NA	NA	45896127	45906467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_45896709_45897019_45897223_45898149_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ENSMUSG00000067389.4_45896128_45906467_2	chr17	+	2061	14	NIC	ENSMUSG00000067389.4	novel	811	2	NA	NA	-918	7164	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2845	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCCGAGCGCTTTCAAAC	NA	False	NA	NA	False	NA	NA	NA	45896127	45906467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ENSMUSG00000067389.4_45896128_45906467_3	chr17	+	2067	14	NNC	ENSMUSG00000067389.4	novel	811	2	NA	NA	-918	7164	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCCGAGCGCTTTCAAAC	NA	False	NA	NA	False	NA	NA	NA	45896127	45906467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901258_45903097_45903188_45904257_45904359_45906407
ENSMUSG00000067389.4_45896128_45910530_1	chr17	+	2139	14	NIC	ENSMUSG00000067389.4	novel	811	2	NA	NA	-918	11227	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGCTGGAGGAGTGGAGAT	NA	False	NA	NA	False	NA	NA	NA	45896127	45910530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45910398
ENSMUSG00000067424.14_33311432_33325170_1	chr17	+	1896	4	FSM	ENSMUSG00000067424.14	ENSMUST00000140829.2	758	4	0	-1138	0	1138	multi-exon	FALSE	canonical	3	19	junction_1	2.05480466765633	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGAAGTTTGCTTAAG	NA	False	NA	NA	False	AATAAA	-17	NA	33311431	33325170	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_33311567_33321204_33321332_33321516_33321578_33323597
ENSMUSG00000067547.7_6683404_6684367_1	chr15	+	868	2	NNC	ENSMUSG00000022148.17	novel	569	4	NA	NA	-588	3018	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	618	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTATTATTCCAGAAAGAT	NA	False	NA	NA	False	AATAAA	-39	NA	6683403	6684367	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_6684115_6684210
ENSMUSG00000067561.13_101891245_101898222_1	chrX	-	1421	8	NIC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_7	51.90218429598	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTGCCCAGGTCTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	101898222	101891244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101898030
ENSMUSG00000067562.12_101846569_101853556_1	chrX	+	1429	8	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	0	8	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	52.0670682085782	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101846568	101853556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_101846761_101848305_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
ENSMUSG00000067562.12_101846569_101853556_2	chrX	+	1510	8	NNC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	56.4623768539724	429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101846568	101853556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_101846789_101848252_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
ENSMUSG00000067567.13_101328245_101548752_1	chrX	-	1723	11	FSM	ENSMUSG00000067567.13	ENSMUST00000087916.11	1936	11	213	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	12.0747670784989	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCGTCCCACCGCTCTGT	NA	False	NA	-1	True	AATAAA	-15	NA	101548752	101328244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_101328775_101351244_101351351_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ENSMUSG00000067586.5_51562800_51576166_1	chr13	+	3671	2	FSM	ENSMUSG00000067586.5	ENSMUST00000087978.5	4463	2	125	667	125	-667	multi-exon	FALSE	canonical	3	36	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGAGGCCTGTGTGGTA	NA	False	NA	11	True	AATAAA	-29	NA	51562799	51576166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_51562982_51572677
ENSMUSG00000067713.8_98710678_98723615_1	chr15	-	1557	11	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	394	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	110.40724613901	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	4538	False	NA	-4	True	ATTAAA	-22	NA	98723615	98710677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713616_98713754_98713867_98723568
ENSMUSG00000067713.8_98710678_98729351_1	chr15	-	1599	12	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	107.952239209815	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9400	False	NA	-4	True	ATTAAA	-22	NA	98729351	98710677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713616_98713752_98713867_98723568_98723615_98729310
ENSMUSG00000067722.5_25403528_25404506_1	chr17	+	898	2	NNC	ENSMUSG00000067722.5	novel	3030	2	NA	NA	0	-2130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCAATTTTCTCACCT	NA	False	NA	11	True	AATACA	-16	NA	25403527	25404506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_25403615_25403695
ENSMUSG00000067764.12_72326975_72336599_1	chrX	-	1123	9	NNC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	-17	-473	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_8	149.667913645511	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72336599	72326974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336558
ENSMUSG00000067764.12_72326975_72336599_2	chrX	-	1024	8	NNC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	-17	-473	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_7	157.992508218147	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72336599	72326974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_72327390_72327485_72327591_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336558
ENSMUSG00000067764.12_72326975_72336599_3	chrX	-	1177	9	NNC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	-17	-473	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_8	157.760696943187	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72336599	72326974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336504
ENSMUSG00000067768.13_72257939_72266059_1	chrX	+	1156	9	NIC	ENSMUSG00000067768.13	novel	1200	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	102.689382971172	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257938	72266059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_72258064_72258379_72258427_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ENSMUSG00000067768.13_72257939_72266059_2	chrX	+	1192	9	NIC	ENSMUSG00000067768.13	novel	1200	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	78.4071903590481	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257938	72266059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_72258064_72258379_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ENSMUSG00000067768.13_72257939_72266059_3	chrX	+	1180	9	NIC	ENSMUSG00000067768.13	novel	1200	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	104.319221622863	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257938	72266059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_72258088_72258379_72258427_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ENSMUSG00000067768.13_72257939_72266059_4	chrX	+	1203	9	NIC	ENSMUSG00000067768.13	novel	1200	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	106.011791796951	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257938	72266059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_72258088_72258379_72258463_72258846_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ENSMUSG00000067847.14_155986153_155987717_1	chr2	+	375	3	FSM	ENSMUSG00000067847.14	ENSMUST00000088610.11	569	3	194	0	0	0	multi-exon	FALSE	canonical	3	748	junction_1	118.5	4703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTATTTTTACCTAGTA	6545	False	NA	17	True	AATAAA	-22	NA	155986152	155987717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_155986201_155986378_155986510_155987521
ENSMUSG00000067873.12_56099258_56112543_1	chrX	+	2715	9	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	283	0	0	0	3prime_fragment	FALSE	canonical	3	455	junction_5	31.3996417177012	411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGACTTGAGTTAACTTG	NA	False	NA	16	True	AATAAA	-31	NA	56099257	56112543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ENSMUSG00000067916.10_147216495_147287258_1	chr4	+	549	4	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	0	22222	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	99.9911107160143	2246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGAAGGGGCTTTCGC	NA	False	NA	NA	False	NA	NA	NA	147216494	147287258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147216647_147219028_147219122_147224494_147224577_147287036
ENSMUSG00000067916.10_147233134_147263016_1	chr4	+	611	5	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	-1817	1787	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	34.022051672408	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	2765	False	NA	NA	False	AATACA	-2	NA	147233133	147263016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147233279_147249797_147249844_147260303_147260362_147261203_147261331_147262781
ENSMUSG00000067916.10_147233134_147266219_2	chr4	+	3814	5	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	-1817	1183	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	34.022051672408	2125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	2765	False	NA	NA	False	NA	NA	NA	147233133	147266219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147233279_147249797_147249844_147260303_147260362_147261203_147261331_147262781
ENSMUSG00000067919.9_147056363_147142057_1	chr4	+	859	5	Fusion	ENSMUSG00000067919.9_ENSMUSG00000086147.3	novel	2295	5	NA	NA	-70	-3194	multi-exon	FALSE	canonical	3	25	junction_2	225.088316000631	672	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGTTTCTAGACAAAAC	NA	False	NA	NA	False	AATAAA	-14	NA	147056362	147142057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_147056575_147058404_147058498_147136962_147137048_147140055_147140183_147141715
ENSMUSG00000067919.9_147056420_147141977_1	chr4	+	793	6	Fusion	ENSMUSG00000067919.9_ENSMUSG00000086147.3	novel	2295	5	NA	NA	-13	-3274	multi-exon	FALSE	canonical	1	1	junction_5	251.648643946277	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCTTCTATCATTAGTC	NA	False	NA	NA	False	TATAAA	-21	NA	147056419	147141977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_147056575_147058404_147058498_147136962_147137048_147140055_147140183_147141078_147141150_147141715
ENSMUSG00000067919.9_147056420_147141977_2	chr4	+	722	5	Fusion	ENSMUSG00000067919.9_ENSMUSG00000086147.3	novel	2295	5	NA	NA	-13	-3274	multi-exon	FALSE	canonical	3	25	junction_2	225.088316000631	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCTTCTATCATTAGTC	NA	False	NA	NA	False	TATAAA	-21	NA	147056419	147141977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_147056575_147058404_147058498_147136962_147137048_147140055_147140183_147141715
ENSMUSG00000067919.9_147056420_147142889_1	chr4	+	1549	6	Fusion	ENSMUSG00000067919.9_ENSMUSG00000086147.3	novel	2295	5	NA	NA	-13	-2362	multi-exon	TRUE	canonical	0	0	junction_5	249.753158138191	727	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCATCTTAGTATTCATC	NA	False	NA	NA	False	NA	NA	NA	147056419	147142889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_147056575_147058404_147058498_147136962_147137048_147140055_147140183_147141715_147142274_147142358
ENSMUSG00000067919.9_147060187_147141977_1	chr4	+	769	6	NNC	ENSMUSG00000067919.9	novel	3993	5	NA	NA	-46120	-3274	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	261.061984976748	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCTTCTATCATTAGTC	NA	False	NA	NA	False	TATAAA	-21	NA	147060186	147141977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147060315_147107818_147107913_147115003_147115080_147136965_147137048_147140055_147140183_147141715
ENSMUSG00000067919.9_147106307_147141977_1	chr4	+	795	6	NNC	ENSMUSG00000067919.9	novel	3993	5	NA	NA	0	-3274	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	254.496365396443	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCTTCTATCATTAGTC	2283	False	NA	NA	False	TATAAA	-21	NA	147106306	147141977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147106458_147107818_147107913_147115003_147115080_147136962_147137048_147140055_147140183_147141715
ENSMUSG00000067919.9_147106307_147141977_2	chr4	+	719	5	FSM	ENSMUSG00000067919.9	ENSMUST00000075775.6	3993	5	0	3274	0	-3274	multi-exon	FALSE	canonical	1	1	junction_2	279.904894562421	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCTTCTATCATTAGTC	2283	False	NA	NA	False	TATAAA	-21	NA	147106306	147141977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_147106458_147107818_147107913_147136962_147137048_147140055_147140183_147141715
ENSMUSG00000067931.7_21787270_21808961_1	chr17	+	2552	7	NNC	ENSMUSG00000067931.7	novel	2652	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	39.6880194629171	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATGGAAAGATTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	21787269	21808961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_21787508_21789310_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806966_21807255_21807354
ENSMUSG00000067942.7_21229261_21249123_1	chr17	+	3864	5	FSM	ENSMUSG00000067942.7	ENSMUST00000232354.2	1041	5	48	-2871	0	0	multi-exon	FALSE	canonical	3	24	junction_4	15.2807067899361	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTCTTTTGTTTGT	NA	False	NA	13	True	AGTAAA	-24	NA	21229260	21249123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_21229371_21231937_21232035_21240333_21240461_21240967_21241097_21245722
ENSMUSG00000067995.5_76134377_76248335_1	chr14	-	1504	7	NNC	ENSMUSG00000067995.5	novel	1467	8	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	207.983706626799	2555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGATGGCAACTGTTATC	NA	False	NA	-17	True	AATAAA	-19	NA	76248335	76134376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233032_76245144_76245219_76248119
ENSMUSG00000067995.5_76134377_76248335_2	chr14	-	1482	7	NNC	ENSMUSG00000067995.5	novel	1467	8	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	207.983706626799	1528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGATGGCAACTGTTATC	NA	False	NA	-17	True	AATAAA	-19	NA	76248335	76134376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76245140_76245219_76248119
ENSMUSG00000067995.5_76134598_76248335_1	chr14	-	1283	7	NNC	ENSMUSG00000067995.5	novel	1467	8	NA	NA	-30	-221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	207.983706626799	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCAAGCGTAAATGGGA	NA	False	NA	1	True	ATTAAA	-25	NA	76248335	76134597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233032_76245144_76245219_76248119
ENSMUSG00000067995.5_76134598_76248335_2	chr14	-	1261	7	NNC	ENSMUSG00000067995.5	novel	1467	8	NA	NA	-30	-221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	207.983706626799	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCAAGCGTAAATGGGA	NA	False	NA	1	True	ATTAAA	-25	NA	76248335	76134597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76245140_76245219_76248119
ENSMUSG00000067995.5_76134810_76248335_1	chr14	-	1071	7	NNC	ENSMUSG00000067995.5	novel	1467	8	NA	NA	-30	-433	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	207.983706626799	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGATGTTATTTATAG	NA	False	NA	-4	True	CATAAA	-23	NA	76248335	76134809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233032_76245144_76245219_76248119
ENSMUSG00000067995.5_76134810_76248335_2	chr14	-	1049	7	NNC	ENSMUSG00000067995.5	novel	1467	8	NA	NA	-30	-433	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	207.983706626799	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGATGTTATTTATAG	NA	False	NA	-4	True	CATAAA	-23	NA	76248335	76134809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76245140_76245219_76248119
ENSMUSG00000068036.17_14108617_14126064_1	chr17	+	3075	5	ISM	ENSMUSG00000068036.17	ENSMUST00000170827.9	7338	33	127814	-8	-175	7	3prime_fragment	FALSE	canonical	3	370	junction_3	17.1518949390439	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTTGGTTGTTTTTCTG	NA	False	NA	34	True	ATTAAA	-23	NA	14108616	14126064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ENSMUSG00000068039.14_13130485_13135000_1	chr17	+	738	4	NIC	ENSMUSG00000068039.14	novel	329	3	NA	NA	-4103	-2001	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCTCGGTGTCTCAAGG	NA	False	NA	NA	False	NA	NA	NA	13130484	13135000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_13130637_13132656_13132889_13134524_13134712_13134833
ENSMUSG00000068039.14_13135336_13143443_1	chr17	+	1868	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	67	511	0	0	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	3852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135335	13143443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000068039.14_13135336_13143443_2	chr17	+	1782	11	FSM	ENSMUSG00000068039.14	ENSMUST00000089024.13	1902	11	120	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	1038.79458989735	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135335	13143443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_13135517_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000068039.14_13135336_13162647_1	chr17	+	1869	13	NNC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	0	18693	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_12	996.447450111311	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTTCCTGTCCTCA	NA	False	NA	2	True	ATTAAA	-16	NA	13135335	13162647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146_13143323_13162525
ENSMUSG00000068101.12_82118280_82128611_1	chr15	-	974	5	FSM	ENSMUSG00000068101.12	ENSMUST00000230408.2	593	5	0	-381	0	0	multi-exon	FALSE	canonical	3	1067	junction_2	109.17045158833	1998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTTGTAGATGCAGA	NA	False	NA	-17	True	AAAAAG	-14	NA	82128611	82118279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333
ENSMUSG00000068101.12_82118280_82128611_2	chr15	-	882	6	NIC	ENSMUSG00000068101.12	novel	1202	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	488.753271088798	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTTGTAGATGCAGA	NA	False	NA	-17	True	AAAAAG	-14	NA	82128611	82118279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128505
ENSMUSG00000068101.12_82118280_82128949_1	chr15	-	902	6	FSM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	0	300	0	0	multi-exon	FALSE	canonical	3	1067	junction_2	108.849253557386	3777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTTGTAGATGCAGA	NA	False	NA	-17	True	AAAAAG	-14	NA	82128949	82118279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ENSMUSG00000068184.8_108189123_108295018_2	chr13	-	507	5	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	3	163	junction_1	183.055319507519	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCGTATTTCCTGACT	NA	False	NA	-1	True	AATAAA	-15	NA	108295018	108189122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_108189189_108189220_108189489_108217886_108217928_108228067_108228158_108294976
ENSMUSG00000068184.8_108189123_108295125_1	chr13	-	590	5	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	252.741345054583	1043	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCGTATTTCCTGACT	NA	False	NA	-1	True	AATAAA	-15	NA	108295125	108189122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_108189176_108189231_108189489_108217886_108217928_108228067_108228158_108294976
ENSMUSG00000068184.8_108189123_108295125_2	chr13	-	614	5	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	163	junction_1	183.055319507519	2011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCGTATTTCCTGACT	NA	False	NA	-1	True	AATAAA	-15	NA	108295125	108189122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_108189189_108189220_108189489_108217886_108217928_108228067_108228158_108294976
ENSMUSG00000068184.8_108189123_108295125_3	chr13	-	613	5	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	252.741345054583	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCGTATTTCCTGACT	NA	False	NA	-1	True	AATAAA	-15	NA	108295125	108189122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_108189215_108189247_108189489_108217886_108217928_108228067_108228158_108294976
ENSMUSG00000068184.8_108189123_108295125_5	chr13	-	597	5	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	252.741345054583	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCGTATTTCCTGACT	NA	False	NA	-1	True	AATAAA	-15	NA	108295125	108189122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_108189199_108189247_108189489_108217886_108217928_108228067_108228158_108294976
ENSMUSG00000068205.15_140237376_140262415_1	chr2	+	1072	4	FSM	ENSMUSG00000068205.15	ENSMUST00000043836.8	3552	4	21	2459	0	0	multi-exon	FALSE	canonical	3	66	junction_3	7.40870359029762	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGATTCCTGTTTATGCT	NA	False	NA	NA	False	AATAAA	-17	NA	140237375	140262415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_140237642_140242781_140242899_140260736_140260835_140261824
ENSMUSG00000068220.7_78810926_78814396_1	chr15	+	530	4	FSM	ENSMUSG00000068220.7	ENSMUST00000089377.6	800	4	1	269	0	5	multi-exon	FALSE	canonical	3	1912	junction_2	63.4367576584918	8061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCCTTTCATGGGAGA	NA	False	NA	14	True	AATAAA	-25	NA	78810925	78814396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_78811005_78812169_78812250_78813832_78814005_78814197
ENSMUSG00000068245.15_59586181_59607998_1	chr14	-	346	3	NNC	ENSMUSG00000068245.15	novel	1281	8	NA	NA	-5079	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.5	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607998	59586180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_59586309_59599182_59599305_59607902
ENSMUSG00000068245.15_59586181_59607998_10	chr14	-	1261	10	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5079	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	109.915568045502	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607998	59586180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_59586501_59586670_59586838_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ENSMUSG00000068245.15_59586181_59607998_11	chr14	-	2460	10	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5079	0	intron_retention	FALSE	canonical	3	278	junction_1	41.3145118437685	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607998	59586180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59593900_59596924_59597033_59599182_59599305_59607902
ENSMUSG00000068245.15_59586181_59607998_12	chr14	-	1129	9	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5079	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	114.076728564594	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607998	59586180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_59586501_59586670_59586838_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ENSMUSG00000068245.15_59586181_59607998_2	chr14	-	1201	10	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5079	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	114.002923939111	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607998	59586180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ENSMUSG00000068245.15_59586181_59607998_3	chr14	-	1501	10	NNC	ENSMUSG00000068245.15	novel	1130	10	NA	NA	-5079	0	intron_retention	FALSE	non_canonical	0	0	junction_9	116.590557184925	3018	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607998	59586180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607904
ENSMUSG00000068245.15_59586181_59607998_4	chr14	-	1331	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5079	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	111.176481325863	2648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607998	59586180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607904
ENSMUSG00000068245.15_59586181_59607998_5	chr14	-	1431	9	NNC	ENSMUSG00000068245.15	novel	1130	10	NA	NA	-5079	0	intron_retention	FALSE	canonical	3	19	junction_1	116.070829668785	1380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607998	59586180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_59586838_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ENSMUSG00000068245.15_59586181_59607998_6	chr14	-	1327	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5079	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	111.141756329473	2684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607998	59586180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590226_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ENSMUSG00000068245.15_59586181_59607998_7	chr14	-	1712	10	NNC	ENSMUSG00000068245.15	novel	1130	10	NA	NA	-5079	0	intron_retention	FALSE	canonical	3	15	junction_9	112.089690718782	1544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607998	59586180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607693
ENSMUSG00000068245.15_59586181_59607998_8	chr14	-	1500	10	NNC	ENSMUSG00000068245.15	novel	1130	10	NA	NA	-5079	0	intron_retention	FALSE	canonical	0	0	junction_9	116.590557184925	1736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607998	59586180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599298_59607898
ENSMUSG00000068245.15_59586181_59607998_9	chr14	-	1330	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5079	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	111.176481325863	2560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607998	59586180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599298_59607898
ENSMUSG00000068245.15_59590623_59607995_1	chr14	-	783	7	NNC	ENSMUSG00000068245.15	novel	1281	8	NA	NA	-5076	-4121	at_least_one_novel_splicesite	FALSE	canonical	3	329	junction_3	34.8684033984287	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACACTGCTGTATCAAAA	NA	False	NA	NA	False	CATAAA	-28	NA	59607995	59590622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ENSMUSG00000068250.14_149059081_149090185_1	chr6	-	718	5	NIC	ENSMUSG00000068250.14	novel	1457	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	42.3932482831877	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTATTGTCCCATATT	NA	False	NA	-6	True	TATAAA	-24	NA	149090185	149059080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149090103
ENSMUSG00000068250.14_149059081_149090185_2	chr6	-	863	6	NIC	ENSMUSG00000068250.14	novel	1457	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	34.1607962436475	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTATTGTCCCATATT	NA	False	NA	-6	True	TATAAA	-24	NA	149090185	149059080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149090103
ENSMUSG00000068250.14_149059081_149090185_3	chr6	-	1130	7	NIC	ENSMUSG00000068250.14	novel	1369	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	33.0840680019183	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTATTGTCCCATATT	NA	False	NA	-6	True	TATAAA	-24	NA	149090185	149059080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149089969
ENSMUSG00000068250.14_149059081_149090185_4	chr6	-	996	7	FSM	ENSMUSG00000068250.14	ENSMUST00000111535.8	1457	7	25	436	0	0	multi-exon	FALSE	canonical	3	74	junction_5	14.7723465374402	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTATTGTCCCATATT	NA	False	NA	-6	True	TATAAA	-24	NA	149090185	149059080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149090103
ENSMUSG00000068264.12_131052290_131055434_1	chr2	+	1565	4	NNC	ENSMUSG00000068264.12	novel	1521	3	NA	NA	0	0	intron_retention	FALSE	non_canonical	3	28	junction_3	12.8322510366134	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	11	True	ATTAAA	-17	NA	131052289	131055434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_131052602_131053182_131053394_131054366_131055364_131055389
ENSMUSG00000068264.12_131052290_131055434_2	chr2	+	1354	3	NNC	ENSMUSG00000068264.12	novel	1521	3	NA	NA	0	0	intron_retention	FALSE	non_canonical	3	28	junction_2	3.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	11	True	ATTAAA	-17	NA	131052289	131055434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_131052602_131054366_131055364_131055389
ENSMUSG00000068290.12_130495955_130506579_1	chr2	-	1168	9	NNC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	130.411607995608	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTGTTGTTTGTAGA	NA	False	NA	-4	True	ATTAAA	-16	NA	130506579	130495954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503753_130503985_130504110_130505267_130505475_130506394
ENSMUSG00000068290.12_130495955_130506579_2	chr2	-	1162	9	NNC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	170.568855231546	1524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTGTTGTTTGTAGA	NA	False	NA	-4	True	ATTAAA	-16	NA	130506579	130495954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500626_130503656_130503753_130503985_130504110_130505267_130505475_130506394
ENSMUSG00000068290.12_130495955_130506579_3	chr2	-	1163	9	NNC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	164.633494465737	1531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTGTTGTTTGTAGA	NA	False	NA	-4	True	ATTAAA	-16	NA	130506579	130495954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503753_130503985_130504105_130505267_130505475_130506394
ENSMUSG00000068323.13_83254375_83280739_4	chr6	+	1985	13	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	0	281	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_11	174.270144698779	169	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCAAGTGGCCAGTGGT	5726	False	NA	12	True	AATAAA	-22	NA	83254374	83280739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83276591_83276676_83277452_83277521_83280307
ENSMUSG00000068323.13_83254375_83280739_5	chr6	+	1901	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	40018	1187	0	281	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	782	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCAAGTGGCCAGTGGT	5726	False	NA	12	True	AATAAA	-22	NA	83254374	83280739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ENSMUSG00000068323.13_83254375_83281143_1	chr6	+	2305	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	40018	783	0	685	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	939	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCTCTGAGTGGATT	5726	False	NA	8	True	NA	NA	NA	83254374	83281143	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ENSMUSG00000068323.13_83254375_83281347_1	chr6	+	2509	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	40018	579	0	-579	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	964	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCATGCTAGGCAG	5726	False	NA	NA	False	NA	NA	NA	83254374	83281347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ENSMUSG00000068328.10_83031712_83034663_1	chr6	+	1659	11	NIC	ENSMUSG00000068328.11	novel	1265	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	960	junction_9	76.9269783626005	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5423	False	NA	9	True	ATTAAA	-19	NA	83031711	83034663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068328.10_83031712_83034663_2	chr6	+	1364	12	NNC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	317.12207936872	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5423	False	NA	9	True	ATTAAA	-19	NA	83031711	83034663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_83031814_83031891_83032030_83032109_83032192_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068328.10_83031712_83034663_3	chr6	+	1433	12	FSM	ENSMUSG00000068328.11	ENSMUST00000092618.10	1769	12	210	126	0	0	multi-exon	FALSE	canonical	3	960	junction_10	78.8006166859286	2976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5423	False	NA	9	True	ATTAAA	-19	NA	83031711	83034663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068329.13_83028265_83031018_1	chr6	-	1173	8	FSM	ENSMUSG00000068329.13	ENSMUST00000089645.13	1725	8	534	18	0	0	multi-exon	FALSE	canonical	3	429	junction_7	63.5991913695225	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGTTACAGTCAAAAGT	2431	False	NA	-16	True	AATAAA	-13	NA	83031018	83028264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
ENSMUSG00000068329.13_83028265_83031442_1	chr6	-	1597	8	FSM	ENSMUSG00000068329.13	ENSMUST00000089645.13	1725	8	110	18	-19	0	multi-exon	FALSE	canonical	3	429	junction_7	63.5991913695225	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGTTACAGTCAAAAGT	2007	False	NA	-16	True	AATAAA	-13	NA	83031442	83028264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
ENSMUSG00000068329.13_83031627_83034663_1	chr6	-	1510	12	NNC	ENSMUSG00000068329.13	novel	2512	7	NA	NA	-2409	-1499	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1036	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCAGCATGCCTCGCGG	NA	False	NA	NA	False	NA	NA	NA	83034663	83031626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_83031814_83031891_83032030_83032109_83032253_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068329.13_83031712_83034523_1	chr6	-	1293	12	NIC	ENSMUSG00000068329.13	novel	2512	7	NA	NA	-2269	-1584	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGGCCCCTGGGAAGGC	NA	False	NA	NA	False	NA	NA	NA	83034523	83031711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068329.13_83031712_83034663_1	chr6	-	1631	11	NNC	ENSMUSG00000068329.13	novel	2512	7	NA	NA	-2409	-1584	intron_retention	FALSE	non_canonical	0	0	junction_1	0	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGGCCCCTGGGAAGGC	NA	False	NA	NA	False	NA	NA	NA	83034663	83031711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033767_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068329.13_83031712_83034663_2	chr6	-	1425	12	NNC	ENSMUSG00000068329.13	novel	2512	7	NA	NA	-2409	-1584	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGGCCCCTGGGAAGGC	NA	False	NA	NA	False	NA	NA	NA	83034663	83031711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034264_83034376_83034478
ENSMUSG00000068329.13_83031712_83034663_3	chr6	-	1398	12	NIC	ENSMUSG00000068329.13	novel	2512	7	NA	NA	-2409	-1584	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGGCCCCTGGGAAGGC	NA	False	NA	NA	False	NA	NA	NA	83034663	83031711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_83031814_83031891_83031995_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068329.13_83031712_83034663_4	chr6	-	1428	12	NNC	ENSMUSG00000068329.13	novel	2512	7	NA	NA	-2409	-1584	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGGCCCCTGGGAAGGC	NA	False	NA	NA	False	NA	NA	NA	83034663	83031711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033744_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068329.13_83031712_83034663_5	chr6	-	1424	12	NNC	ENSMUSG00000068329.13	novel	2512	7	NA	NA	-2409	-1584	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	836	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGGCCCCTGGGAAGGC	NA	False	NA	NA	False	NA	NA	NA	83034663	83031711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032943_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068329.13_83031712_83034663_6	chr6	-	1511	11	NIC	ENSMUSG00000068329.13	novel	2512	7	NA	NA	-2409	-1584	intron_retention	FALSE	non_canonical	0	0	junction_1	0	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGGCCCCTGGGAAGGC	NA	False	NA	NA	False	NA	NA	NA	83034663	83031711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068329.13_83031712_83034663_7	chr6	-	1426	12	NNC	ENSMUSG00000068329.13	novel	2512	7	NA	NA	-2409	-1584	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGGCCCCTGGGAAGGC	NA	False	NA	NA	False	NA	NA	NA	83034663	83031711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_83031814_83031891_83032030_83032109_83032261_83032486_83032665_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068329.13_83031712_83034663_8	chr6	-	1428	12	NNC	ENSMUSG00000068329.13	novel	2512	7	NA	NA	-2409	-1584	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGGCCCCTGGGAAGGC	NA	False	NA	NA	False	NA	NA	NA	83034663	83031711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033117_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068335.7_83007915_83010452_1	chr6	-	1733	5	NIC	ENSMUSG00000068335.7	novel	1807	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	11.7686022959398	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCTGCGTATGAATGAG	NA	False	NA	-4	True	ATTAAA	-19	NA	83010452	83007914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_83009042_83009285_83009397_83009515_83009610_83009747_83010048_83010351
ENSMUSG00000068348.5_75107060_75110914_1	chr15	-	870	4	NNC	ENSMUSG00000068348.5	novel	408	3	NA	NA	-297	386	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.9221356098901	363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAAGTCTCTGTTTTTCT	1055	False	NA	-5	True	AATAAA	-16	NA	75110914	75107059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_75107668_75109440_75109558_75110548_75110631_75110851
ENSMUSG00000068348.5_75107060_75303431_1	chr15	-	941	3	Fusion	ENSMUSG00000068348.5_ENSMUSG00000053168.7	novel	408	3	NA	NA	142	386	multi-exon	FALSE	canonical	1	8	junction_2	34	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAAGTCTCTGTTTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	75303431	75107059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr15_-_75107668_75109440_75109558_75303215
ENSMUSG00000068348.5_75107061_75186966_1	chr15	-	947	3	Fusion	ENSMUSG00000068348.5_ENSMUSG00000101289.2	novel	408	3	NA	NA	-153	385	multi-exon	FALSE	canonical	0	0	junction_2	38	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAAGTCTCTGTTTTTC	NA	False	NA	-6	True	AATAAA	-15	NA	75186966	75107060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr15_-_75107668_75109440_75109558_75186743
ENSMUSG00000068417.9_51193617_51202210_1	chr14	+	1208	6	FSM	ENSMUSG00000068417.9	ENSMUST00000095925.5	1372	6	168	-4	-84	4	multi-exon	FALSE	canonical	2	7	junction_3	36.6911433454996	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	51193616	51202210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_51193686_51196971_51197142_51200561_51200666_51200846_51201023_51201135_51201327_51201712
ENSMUSG00000068479.6_121323226_121337146_1	chr2	-	2710	8	NNC	ENSMUSG00000068479.6	novel	4198	7	NA	NA	0	-834	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.593616567141	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGATTTATTTGGTGGTC	NA	False	NA	NA	False	NA	NA	NA	121337146	121323225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_121323366_121324019_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ENSMUSG00000068479.6_121323226_121337146_2	chr2	-	3364	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	0	834	0	-834	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGATTTATTTGGTGGTC	NA	False	NA	NA	False	NA	NA	NA	121337146	121323225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ENSMUSG00000068479.6_121324686_121337146_1	chr2	-	1904	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	0	2294	0	-2294	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGTGTGTGTGTAAGAG	NA	False	NA	NA	False	TATAAA	-17	NA	121337146	121324685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ENSMUSG00000068479.6_121324846_121337146_1	chr2	-	1744	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	0	2454	0	-2454	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGATGGTGTATTCTTTC	NA	False	NA	NA	False	NA	NA	NA	121337146	121324845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ENSMUSG00000068522.5_51903860_51909118_1	chr15	+	991	2	FSM	ENSMUSG00000068522.5	ENSMUST00000090025.5	1348	2	357	0	357	0	multi-exon	FALSE	canonical	3	258	junction_1	0	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTTCTAGTGGTCAT	NA	False	NA	16	True	AATAAA	-27	NA	51903859	51909118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_51903927_51908194
ENSMUSG00000068523.13_146205645_146211303_1	chr3	+	480	3	NNC	ENSMUSG00000068523.13	novel	593	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1786.5	24453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTCCTTACTGATGT	NA	False	NA	2	True	AATAAA	-15	NA	146205644	146211303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_146205770_146209014_146209155_146211088
ENSMUSG00000068566.14_3339100_3347730_2	chr7	+	2637	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	41	135	0	-108	multi-exon	FALSE	canonical	3	335	junction_1	308.5	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATTTTAATTTT	271	False	NA	13	True	NA	NA	NA	3339099	3347730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3339156_3341727_3341816_3345237
ENSMUSG00000068566.14_3339100_3347730_3	chr7	+	2607	4	NNC	ENSMUSG00000068566.14	novel	2813	3	NA	NA	0	-108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	394.295151715903	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATTTTAATTTT	271	False	NA	13	True	NA	NA	NA	3339099	3347730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_3339156_3341727_3341816_3345237_3346669_3346698
ENSMUSG00000068566.14_3339100_3347730_5	chr7	+	2769	4	NNC	ENSMUSG00000068566.14	novel	4027	3	NA	NA	0	-108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	400.600660120386	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATTTTAATTTT	271	False	NA	13	True	NA	NA	NA	3339099	3347730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_3339318_3341727_3341816_3345237_3346669_3346698
ENSMUSG00000068566.14_3339100_3347865_1	chr7	+	2742	4	NNC	ENSMUSG00000068566.14	novel	2813	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	394.295151715903	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGACTCATGCTTTCT	271	False	NA	14	True	AATATA	-8	NA	3339099	3347865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_3339156_3341727_3341816_3345237_3346669_3346698
ENSMUSG00000068566.14_3339100_3347865_2	chr7	+	2904	4	NNC	ENSMUSG00000068566.14	novel	4027	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	400.600660120386	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGACTCATGCTTTCT	271	False	NA	14	True	AATATA	-8	NA	3339099	3347865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_3339318_3341727_3341816_3345237_3346669_3346698
ENSMUSG00000068566.14_3341566_3347730_1	chr7	+	2629	3	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	-53	-108	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	427.5	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATTTTAATTTT	2737	False	NA	13	True	NA	NA	NA	3341565	3347730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_3341614_3341727_3341816_3345237
ENSMUSG00000068566.14_3341566_3347730_2	chr7	+	2599	4	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	-53	-108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	427.750965970726	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATTTTAATTTT	2737	False	NA	13	True	NA	NA	NA	3341565	3347730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_3341614_3341727_3341816_3345237_3346669_3346698
ENSMUSG00000068566.14_3341566_3347865_1	chr7	+	2764	3	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	427.5	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGACTCATGCTTTCT	2737	False	NA	14	True	AATATA	-8	NA	3341565	3347865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_3341614_3341727_3341816_3345237
ENSMUSG00000068566.14_3341566_3347865_2	chr7	+	2734	4	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	427.750965970726	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGACTCATGCTTTCT	2737	False	NA	14	True	AATATA	-8	NA	3341565	3347865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_3341614_3341727_3341816_3345237_3346669_3346698
ENSMUSG00000068566.14_3341619_3347730_1	chr7	+	2690	2	FSM	ENSMUSG00000068566.14	ENSMUST00000164553.8	2798	2	0	108	0	-108	multi-exon	FALSE	canonical	3	952	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATTTTAATTTT	2790	False	NA	13	True	NA	NA	NA	3341618	3347730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3341816_3345237
ENSMUSG00000068566.14_3341619_3347730_2	chr7	+	2660	3	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	0	-108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	476	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATTTTAATTTT	2790	False	NA	13	True	NA	NA	NA	3341618	3347730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_3341816_3345237_3346669_3346698
ENSMUSG00000068566.14_3341619_3347865_1	chr7	+	2795	3	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	476	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGACTCATGCTTTCT	2790	False	NA	14	True	AATATA	-8	NA	3341618	3347865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_3341816_3345237_3346669_3346698
ENSMUSG00000068580.12_119002981_119039276_1	chr2	+	1014	11	NNC	ENSMUSG00000068580.12	novel	2008	11	NA	NA	-36117	-1745	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCCAGGAGTCTGAGCG	5935	False	NA	NA	False	NA	NA	NA	119002980	119039276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014073_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
ENSMUSG00000068580.12_119039493_119047530_1	chr2	+	1630	11	FSM	ENSMUSG00000068580.12	ENSMUST00000090174.11	2008	11	378	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	26.2152627299442	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGATGTTTTTTCTGTC	289	False	NA	8	True	NA	NA	NA	119039492	119047530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
ENSMUSG00000068601.3_39374738_39397237_1	chr6	+	2887	8	NIC	ENSMUSG00000068601.3	novel	474	2	NA	NA	-22083	-599	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	839	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCCCCGGAACTTCCGG	NA	False	NA	NA	False	NA	NA	NA	39374737	39397237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ENSMUSG00000068601.3_39375949_39397237_1	chr6	+	1676	8	NIC	ENSMUSG00000068601.3	novel	474	2	NA	NA	-20872	-599	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCCCCGGAACTTCCGG	NA	False	NA	NA	False	NA	NA	NA	39375948	39397237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ENSMUSG00000068601.3_39375949_39397396_1	chr6	+	1835	8	NIC	ENSMUSG00000068601.3	novel	474	2	NA	NA	-20872	-440	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCCGCAGGGCACCCGC	NA	False	NA	NA	False	NA	NA	NA	39375948	39397396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ENSMUSG00000068601.3_39377694_39397237_1	chr6	+	1456	5	NIC	ENSMUSG00000068601.3	novel	474	2	NA	NA	-19127	-599	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCCCCGGAACTTCCGG	NA	False	NA	NA	False	NA	NA	NA	39377693	39397237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ENSMUSG00000068601.3_39377694_39397396_1	chr6	+	1615	5	NIC	ENSMUSG00000068601.3	novel	474	2	NA	NA	-19127	-440	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCCGCAGGGCACCCGC	NA	False	NA	NA	False	NA	NA	NA	39377693	39397396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ENSMUSG00000068663.15_10363241_10381419_1	chr16	+	814	3	FSM	ENSMUSG00000068663.15	ENSMUST00000130148.2	704	3	0	-110	0	110	multi-exon	FALSE	canonical	3	59	junction_1	9	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCATGGGTGTTTTGCCT	NA	False	NA	NA	False	ATTAAA	-19	NA	10363240	10381419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_10363507_10377884_10378014_10381000
ENSMUSG00000068663.15_10363241_10386514_1	chr16	+	798	4	ISM	ENSMUSG00000068663.15	ENSMUST00000038145.13	3730	21	-32	127078	0	5205	5prime_fragment	FALSE	canonical	3	48	junction_3	11.9536140513607	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	10363240	10386514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245
ENSMUSG00000068686.13_103900194_103915165_1	chr2	+	651	4	FSM	ENSMUSG00000068686.13	ENSMUST00000129749.8	434	4	-42	-175	0	0	multi-exon	FALSE	canonical	3	21	junction_3	22.7596133534821	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGAGCCCACTTGCAGTT	NA	False	NA	NA	False	NA	NA	NA	103900193	103915165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_103900265_103909202_103909282_103911341_103911444_103914766
ENSMUSG00000068739.14_108333928_108352514_1	chr3	-	1817	11	NNC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	822.047012037633	10862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGCTTCCCCAGTCTCC	NA	False	NA	-39	True	AATAAA	-18	NA	108352514	108333927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343277_108344824_108344896_108352312
ENSMUSG00000068739.14_108333928_108352514_2	chr3	-	1823	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	0	1747	0	0	multi-exon	FALSE	canonical	3	2549	junction_7	105.882198692698	11176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGCTTCCCCAGTCTCC	NA	False	NA	-39	True	AATAAA	-18	NA	108352514	108333927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ENSMUSG00000068739.14_108344845_108352514_1	chr3	-	253	2	ISM	ENSMUSG00000068739.14	ENSMUST00000197647.2	1801	3	-42	3132	0	-3132	5prime_fragment	FALSE	canonical	3	2711	junction_1	0	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTGGGGAGAAAATGAAG	NA	False	NA	4	True	NA	NA	NA	108352514	108344844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_108344896_108352312
ENSMUSG00000068744.13_108291155_108295210_1	chr3	+	1370	8	FSM	ENSMUSG00000068744.13	ENSMUST00000102629.8	1687	8	-20	337	0	-285	multi-exon	FALSE	canonical	3	155	junction_1	112.452983372553	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATCTGTCTCCTTCCATC	7032	False	NA	19	True	AATAAA	-15	NA	108291154	108295210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_108291212_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ENSMUSG00000068744.13_108291155_108295495_1	chr3	+	1743	7	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	155	junction_1	118.602510747267	1942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTGAAAGTAGATTTT	7032	False	NA	16	True	AATAAA	-24	NA	108291154	108295495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_108291212_108291551_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ENSMUSG00000068749.10_108164483_108187290_1	chr3	+	998	9	FSM	ENSMUSG00000068749.10	ENSMUST00000090569.10	1239	9	241	0	241	0	multi-exon	FALSE	canonical	3	2544	junction_4	248.775972262194	12706	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATAGTCTGTGATC	NA	False	NA	11	True	AATAAA	-15	NA	108164482	108187290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_108164622_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606_108179694_108187050
ENSMUSG00000068758.9_8114273_8119757_1	chr14	-	698	6	NIC	ENSMUSG00000068758.9	novel	1614	12	NA	NA	385	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	12.5793481548131	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTCCTGTGCTGCTATC	NA	False	NA	-2	True	AATAAA	-16	NA	8119757	8114272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8119495
ENSMUSG00000068758.9_8114273_8119757_2	chr14	-	450	3	NIC	ENSMUSG00000068758.9	novel	1614	12	NA	NA	385	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	17.5	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTCCTGTGCTGCTATC	NA	False	NA	-2	True	AATAAA	-16	NA	8119757	8114272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_8114394_8114689_8114757_8119495
ENSMUSG00000068798.11_105635630_105708663_1	chr3	-	1371	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	-11	1047	-11	0	multi-exon	FALSE	canonical	3	409	junction_7	23.7667234354495	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGGATGATTAAATTTT	NA	False	NA	40	True	ATTAAA	-9	NA	105708663	105635629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ENSMUSG00000068798.11_105635767_105708610_1	chr3	-	1181	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	42	1184	-9	-137	multi-exon	FALSE	canonical	3	409	junction_7	23.7667234354495	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTGGAAAAATGGGTCT	NA	False	NA	-2	True	ATTAAA	-16	NA	105708610	105635766	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ENSMUSG00000068798.11_105635959_105708663_1	chr3	-	1042	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	-11	1376	-11	0	multi-exon	FALSE	canonical	3	409	junction_7	23.7667234354495	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGACTCCTCCCTGTCAA	NA	False	NA	NA	False	NA	NA	NA	105708663	105635958	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ENSMUSG00000068823.11_102927929_102964448_3	chr3	+	3085	20	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4594.89725408776	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAGTTGCAGCCTGGAA	NA	False	NA	32	True	AATAAA	-28	NA	102927928	102964448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957053_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068823.11_102927929_102965123_2	chr3	+	3760	20	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4594.89725408776	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCTGTTTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	102927928	102965123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957053_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068823.11_102927929_102965123_3	chr3	+	3667	19	NNC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	4600.96803991519	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCTGTTTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	102927928	102965123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957053_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068823.11_102927929_102965502_2	chr3	+	4046	19	NNC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	4600.96803991519	2305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	NA	False	NA	22	True	AATAAA	-25	NA	102927928	102965502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957053_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068856.4_96079863_96084503_1	chr3	+	1323	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	215	377	0	-377	multi-exon	FALSE	canonical	3	1297	junction_3	204.272758829953	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATCCTCCCTTTATCT	NA	False	NA	NA	False	AGTAAA	-21	NA	96079862	96084503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ENSMUSG00000068856.4_96079863_96084705_1	chr3	+	1525	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	215	175	0	-175	multi-exon	FALSE	canonical	3	1297	junction_3	204.272758829953	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTCTGGTGAAGTAACT	NA	False	NA	20	True	AATAAA	-16	NA	96079862	96084705	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ENSMUSG00000068860.6_95144418_95148364_1	chr3	-	1227	2	FSM	ENSMUSG00000068860.6	ENSMUST00000090815.6	1959	2	545	187	545	0	multi-exon	FALSE	canonical	3	31	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGGTCTCATTTTTCT	NA	False	NA	-1	True	AATATA	-21	NA	95148364	95144417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95144541_95147260
ENSMUSG00000068860.6_95144418_95148364_2	chr3	-	744	3	FSM	ENSMUSG00000068860.6	ENSMUST00000107197.2	1289	3	545	0	545	0	multi-exon	FALSE	canonical	3	16	junction_2	7.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGGTCTCATTTTTCT	NA	False	NA	-1	True	AATATA	-21	NA	95148364	95144417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95144541_95147260_95147423_95147905
ENSMUSG00000068882.14_69691967_69701854_1	chr2	+	1664	12	FSM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	61	276	0	0	multi-exon	FALSE	canonical	3	1543	junction_7	118.150135613357	5553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATAGTTCTTTCTTCTT	NA	False	NA	14	True	TATAAA	-5	NA	69691966	69701854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ENSMUSG00000068882.14_69701562_69715943_1	chr2	+	849	6	NIC	ENSMUSG00000068882.14	novel	991	6	NA	NA	2439	13753	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGCCGGAAGTACCGAC	NA	False	NA	NA	False	NA	NA	NA	69701561	69715943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_69701661_69702075_69702126_69704227_69704280_69711110_69711293_69711640_69711756_69715592
ENSMUSG00000068882.14_69701562_69715943_2	chr2	+	932	7	NIC	ENSMUSG00000068882.14	novel	991	6	NA	NA	2439	13753	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGCCGGAAGTACCGAC	NA	False	NA	NA	False	NA	NA	NA	69701561	69715943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_69701661_69702075_69702126_69704227_69704280_69709445_69709529_69711110_69711293_69711640_69711756_69715592
ENSMUSG00000068921.15_88830942_88857258_1	chr3	-	1306	12	NIC	ENSMUSG00000068921.15	novel	1375	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	248.823878102664	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857258	88830941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ENSMUSG00000068921.15_88830942_88857258_2	chr3	-	1225	11	NIC	ENSMUSG00000068921.15	novel	1375	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	267.054020752356	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857258	88830941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ENSMUSG00000068921.15_88830942_88857258_3	chr3	-	1465	13	FSM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	463	2832	0	0	multi-exon	FALSE	canonical	3	805	junction_4	46.7537134591705	2634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857258	88830941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ENSMUSG00000068921.15_88830942_88857578_1	chr3	-	1537	13	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	242.200444994545	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857578	88830941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857422
ENSMUSG00000068921.15_88830942_88858344_1	chr3	-	1550	13	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_12	245.456151322843	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88858344	88830941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88858175
ENSMUSG00000068921.15_88830942_88858488_1	chr3	-	1694	13	NIC	ENSMUSG00000068921.15	novel	1409	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_12	245.456151322843	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88858488	88830941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88858175
ENSMUSG00000068921.15_88836486_88857258_1	chr3	-	895	7	ISM	ENSMUSG00000068921.15	ENSMUST00000107491.11	1375	12	0	5544	0	264	5prime_fragment	FALSE	canonical	3	827	junction_2	41.8728233265125	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTGAGAAAACCTTGAAT	NA	False	NA	NA	False	AATAAA	-22	NA	88857258	88836485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ENSMUSG00000068921.15_88836589_88857258_1	chr3	-	792	7	ISM	ENSMUSG00000068921.15	ENSMUST00000107491.11	1375	12	0	5647	0	161	5prime_fragment	FALSE	canonical	3	827	junction_2	41.8728233265125	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTCCTATTTATGGCT	NA	False	NA	NA	False	AATAAA	-15	NA	88857258	88836588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ENSMUSG00000068922.15_88815800_88817406_1	chr3	-	1080	3	NIC	ENSMUSG00000068922.15	novel	3891	3	NA	NA	1975	134	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCAGCCAGGACCTCT	NA	False	NA	NA	False	NA	NA	NA	88817406	88815799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_88815915_88815993_88816097_88816544
ENSMUSG00000069020.10_29717407_29734076_1	chr2	+	495	4	NNC	ENSMUSG00000069020.10	novel	2196	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	154.514292758523	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTTTACTAGCCTTGCT	NA	False	NA	14	True	AATAAA	-16	NA	29717406	29734076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_29717448_29722703_29722775_29731413_29731475_29733754
ENSMUSG00000069020.10_29717407_29734076_2	chr2	+	1197	5	NNC	ENSMUSG00000069020.10	novel	2196	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	142.628012676332	1633	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTTTACTAGCCTTGCT	NA	False	NA	14	True	AATAAA	-16	NA	29717406	29734076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_29717448_29722703_29722775_29731413_29731496_29732740_29732782_29733114
ENSMUSG00000069020.10_29717407_29734076_3	chr2	+	1205	5	FSM	ENSMUSG00000069020.10	ENSMUST00000091142.4	2196	5	53	938	0	0	multi-exon	FALSE	canonical	3	254	junction_1	41.2158949921023	1637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTTTACTAGCCTTGCT	NA	False	NA	14	True	AATAAA	-16	NA	29717406	29734076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29717448_29722703_29722775_29731413_29731496_29732732_29732782_29733114
ENSMUSG00000069089.9_100839258_100867408_1	chr13	-	1830	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	39	119	0	-119	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	2882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATACTATTGCTTTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	100867408	100839257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ENSMUSG00000069089.9_100839818_100867185_1	chr13	-	1303	11	ISM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	262	679	223	0	3prime_fragment	FALSE	canonical	3	644	junction_3	46.9835077447395	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGATTTATGATTAGAG	NA	False	NA	-29	True	AATAAA	-3	NA	100867185	100839817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965
ENSMUSG00000069089.9_100839818_100867408_1	chr13	-	1270	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	39	679	0	0	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	2736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGATTTATGATTAGAG	NA	False	NA	-29	True	AATAAA	-3	NA	100867408	100839817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ENSMUSG00000069089.9_100839818_100867437_1	chr13	-	898	7	NIC	ENSMUSG00000069089.9	novel	1159	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	275.829305106538	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGATTTATGATTAGAG	NA	False	NA	-29	True	AATAAA	-3	NA	100867437	100839817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100866965_100867026_100867281
ENSMUSG00000069089.9_100839818_100867437_2	chr13	-	1197	10	NIC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_8	235.310564421564	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGATTTATGATTAGAG	NA	False	NA	-29	True	AATAAA	-3	NA	100867437	100839817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100866965_100867026_100867281
ENSMUSG00000069089.9_100839818_100867480_1	chr13	-	1342	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	-33	679	-33	0	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	2771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGATTTATGATTAGAG	NA	False	NA	-29	True	AATAAA	-3	NA	100867480	100839817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ENSMUSG00000069135.12_8384372_8413581_2	chr17	+	1351	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	0	1726	0	-196	multi-exon	TRUE	canonical	3	299	junction_6	38.250587420542	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATACTTCCTATATGAGC	NA	False	NA	NA	False	ATTAAA	-18	NA	8384371	8413581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ENSMUSG00000069135.12_8384372_8414514_2	chr17	+	2284	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	0	793	0	737	multi-exon	FALSE	canonical	3	299	junction_6	38.250587420542	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATTGGACATCACTGA	NA	False	NA	NA	False	ATTAAA	-21	NA	8384371	8414514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ENSMUSG00000069135.12_8384372_8415309_1	chr17	+	3139	13	FSM	ENSMUSG00000069135.12	ENSMUST00000097419.10	3505	13	39	327	0	2	multi-exon	FALSE	canonical	3	46	junction_7	116.477107908235	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACAGTGTTGGTTTTTT	NA	False	NA	32	True	ATTAAA	-24	NA	8384371	8415309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8394411_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ENSMUSG00000069184.5_74519034_74538955_1	chr13	-	2564	5	FSM	ENSMUSG00000069184.5	ENSMUST00000223163.3	4153	5	0	1589	0	511	multi-exon	FALSE	canonical	3	29	junction_1	7.88590514779375	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATTGTTGTATATTAG	NA	False	NA	NA	False	AATAAA	-17	NA	74538955	74519033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_74520947_74523086_74523183_74524554_74524682_74526730_74526986_74538782
ENSMUSG00000069206.15_67588550_67590029_1	chr13	-	355	2	NNC	ENSMUSG00000069206.15	novel	3308	4	NA	NA	7568	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTGTCTGCTTGGTTT	NA	False	NA	6	True	NA	NA	NA	67590029	67588549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_67588656_67589780
ENSMUSG00000069208.10_74627649_74642089_1	chr13	-	2054	5	FSM	ENSMUSG00000069208.10	ENSMUST00000221173.2	1549	5	22	-527	0	524	multi-exon	FALSE	canonical	3	27	junction_3	20.0546129356814	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCTCCAGTTACT	NA	False	NA	NA	False	ATTAAA	-21	NA	74642089	74627648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968
ENSMUSG00000069208.10_74628173_74642297_1	chr13	-	1510	5	NNC	ENSMUSG00000069208.10	novel	1406	4	NA	NA	-186	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	25.7815340893439	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGGTCATGATGTCTAT	NA	False	NA	NA	False	NA	NA	NA	74642297	74628172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_74629270_74630657_74630719_74630935_74631063_74641968_74642054_74642157
ENSMUSG00000069208.10_74628173_74642297_2	chr13	-	1634	6	NNC	ENSMUSG00000069208.10	novel	1549	5	NA	NA	-186	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	26.2022899762597	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGGTCATGATGTCTAT	NA	False	NA	NA	False	NA	NA	NA	74642297	74628172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968_74642054_74642157
ENSMUSG00000069255.14_30844084_30895214_1	chr13	+	1059	8	FSM	ENSMUSG00000069255.14	ENSMUST00000091672.13	1161	8	102	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	7.4258236676383	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGTGCAGTGTGTTCT	NA	False	NA	9	True	AATAAA	-22	NA	30844083	30895214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659_30892733_30894688
ENSMUSG00000069520.7_115177025_115198129_2	chr10	-	2591	7	FSM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	43	378	0	-378	multi-exon	FALSE	canonical	3	182	junction_6	17.9017379665278	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTGCAGCTTAATCAG	NA	False	NA	NA	False	NA	NA	NA	115198129	115177024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
ENSMUSG00000069520.7_115178309_115198129_1	chr10	-	1294	7	NIC	ENSMUSG00000069520.7	novel	2949	7	NA	NA	0	1339	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	68.9365650435239	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGCTCCTCCCGTGTTC	NA	False	NA	NA	False	AATAAA	-18	NA	115198129	115178308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197969
ENSMUSG00000069520.7_115178309_115198129_2	chr10	-	1307	7	FSM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	43	1662	0	1339	multi-exon	FALSE	canonical	3	182	junction_6	17.9017379665278	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGCTCCTCCCGTGTTC	NA	False	NA	NA	False	AATAAA	-18	NA	115198129	115178308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
ENSMUSG00000069539.12_89474934_89522126_1	chr10	-	4442	18	FSM	ENSMUSG00000069539.12	ENSMUST00000092227.12	3566	18	4	-880	-1	-351	multi-exon	FALSE	canonical	2	10	junction_2	5.88058797050879	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGGCTGAATGTTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	89522126	89474933	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_89476979_89477852_89477973_89481323_89481417_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
ENSMUSG00000069601.15_69761649_69851635_1	chr10	+	3226	19	ISM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-135	8838	0	0	5prime_fragment	FALSE	canonical	3	64	junction_16	12.9177120246047	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATGCAGATGTATATA	NA	False	NA	15	True	AATAAA	-20	NA	69761648	69851635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397
ENSMUSG00000069631.15_106054156_106084362_1	chr11	-	2091	12	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	2	7	junction_9	47.5345894069008	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGAATGGCACCAGTG	NA	False	NA	-13	True	ATTAAA	-13	NA	106084362	106054155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106075387_106075446_106077926_106078007_106084291
ENSMUSG00000069631.15_106054156_106084362_2	chr11	-	2033	11	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_9	25.5305699113827	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGAATGGCACCAGTG	NA	False	NA	-13	True	ATTAAA	-13	NA	106084362	106054155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077926_106078007_106084291
ENSMUSG00000069631.15_106054156_106084388_1	chr11	-	2035	11	FSM	ENSMUSG00000069631.15	ENSMUST00000103072.10	1517	11	0	-518	0	0	multi-exon	FALSE	canonical	3	87	junction_9	16.6340013225922	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGAATGGCACCAGTG	NA	False	NA	-13	True	ATTAAA	-13	NA	106084388	106054155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106084291
ENSMUSG00000069678.11_83055371_83057836_1	chr6	+	868	9	NNC	ENSMUSG00000069678.11	novel	918	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	65.2322772866317	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATCTTCCTTCTTAC	150	False	NA	24	True	AATAAA	-16	NA	83055370	83057836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_83055460_83055875_83055982_83056096_83056250_83056420_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ENSMUSG00000069678.11_83055611_83057836_1	chr6	+	1050	8	ISM	ENSMUSG00000069678.11	ENSMUST00000092614.9	866	9	240	-8	0	0	3prime_fragment	FALSE	canonical	3	182	junction_2	10.5521058929254	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATCTTCCTTCTTAC	101	False	NA	24	True	AATAAA	-16	NA	83055610	83057836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ENSMUSG00000069682.7_29574744_29575376_1	chr10	-	580	2	NNC	ENSMUSG00000069682.7	novel	365	2	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	6345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGGAAAAAAAAAATCAATAG	NA	False	NA	-10	True	AATAAA	-19	NA	29575376	29574743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_29574942_29574994
ENSMUSG00000069682.7_29574744_29575376_2	chr10	-	514	2	NNC	ENSMUSG00000069682.7	novel	365	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGGAAAAAAAAAATCAATAG	NA	False	NA	-10	True	AATAAA	-19	NA	29575376	29574743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_29575071_29575189
ENSMUSG00000069682.7_29574744_29575376_3	chr10	-	359	2	NNC	ENSMUSG00000069682.7	novel	365	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGGAAAAAAAAAATCAATAG	NA	False	NA	-10	True	AATAAA	-19	NA	29575376	29574743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_29574933_29575206
ENSMUSG00000069682.7_29574744_29575376_4	chr10	-	520	2	NNC	ENSMUSG00000069682.7	novel	365	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGGAAAAAAAAAATCAATAG	NA	False	NA	-10	True	AATAAA	-19	NA	29575376	29574743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_29575077_29575189
ENSMUSG00000069727.6_42309529_42342191_1	chr7	-	3070	3	NIC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_2	158	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCGTGTCCTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	42342191	42309528	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_42312421_42314181_42314243_42342074
ENSMUSG00000069743.6_22036539_22064740_1	chr17	-	3013	5	FSM	ENSMUSG00000069743.6	ENSMUST00000084141.6	3686	5	0	673	0	310	multi-exon	FALSE	canonical	3	21	junction_3	11.3880419739304	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAAAAGAATACCTTGA	NA	False	NA	NA	False	NA	NA	NA	22064740	22036538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_22039170_22040050_22040178_22042824_22042873_22059604_22059696_22064624
ENSMUSG00000069805.11_63012567_63035975_1	chr13	-	1358	7	FSM	ENSMUSG00000069805.11	ENSMUST00000092888.11	1479	7	121	0	-34	0	multi-exon	FALSE	canonical	0	0	junction_6	4.93288286231625	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTTAGTGCGTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	63035975	63012566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_63012982_63015152_63015273_63016795_63016934_63018979_63019121_63020503_63020597_63022962_63023126_63035687
ENSMUSG00000069833.14_8966648_8981647_1	chr19	+	3187	5	FSM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	0	14913	0	1997	multi-exon	FALSE	canonical	3	15	junction_4	26.3853652618265	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTAGATGTCAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	8966647	8981647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_8979062
ENSMUSG00000069833.14_8966648_9054278_1	chr19	+	1133	7	NIC	ENSMUSG00000069833.14	novel	1188	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	26.9222130508537	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTTCTGTGATCACC	NA	False	NA	13	True	AATAAA	-14	NA	8966647	9054278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9022988_9023081_9053939
ENSMUSG00000069844.13_66943496_66955728_1	chr11	+	1742	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	0	670	0	-429	multi-exon	FALSE	canonical	3	241	junction_2	26.3469163281019	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGACAAGCATGGCTTTG	NA	False	NA	9	True	AATAAA	-21	NA	66943495	66955728	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
ENSMUSG00000069910.3_34700017_34704427_1	chr11	-	928	2	ISM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	20041	0	10351	0	3prime_fragment	FALSE	canonical	3	148	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTGTATTTTTTAAT	7504	False	NA	-7	True	AATAAA	-15	NA	34704427	34700016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_-_34700670_34704152
ENSMUSG00000069919.8_32233675_32234486_1	chr11	+	556	3	FSM	ENSMUSG00000069919.8	ENSMUST00000093209.4	699	3	164	-21	-136	21	multi-exon	FALSE	canonical	1	2	junction_2	1	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCATGCCTGGTTCTCT	7161	False	NA	NA	False	AATAAA	-17	NA	32233674	32234486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_32233802_32233923_32234129_32234262
ENSMUSG00000069920.11_105951838_105979685_1	chr8	-	2945	16	NIC	ENSMUSG00000069920.11	novel	2325	2	NA	NA	2098	27432	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	432	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCGCCCAGAGCAACTG	9717	False	NA	NA	False	NA	NA	NA	105979685	105951837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105975960_105976095_105976228_105976288_105977350_105977424_105978229
ENSMUSG00000070002.8_70992338_71044738_1	chr8	+	2302	12	FSM	ENSMUSG00000070002.8	ENSMUST00000093454.8	3072	12	0	770	0	-770	multi-exon	TRUE	canonical	3	95	junction_2	19.7818683154445	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCAAGGGGCCATCAGT	NA	False	NA	NA	False	NA	NA	NA	70992337	71044738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ENSMUSG00000070283.5_108437669_108442772_1	chr9	-	1663	14	NIC	ENSMUSG00000070283.5	novel	1487	5	NA	NA	1144	5067	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	12199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTGCCGTCCGGACCG	10004	False	NA	NA	False	NA	NA	NA	108442772	108437668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUSG00000070283.5_108437669_108442772_2	chr9	-	1657	14	NNC	ENSMUSG00000070283.5	novel	1487	5	NA	NA	1144	5067	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTGCCGTCCGGACCG	10004	False	NA	NA	False	NA	NA	NA	108442772	108437668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440529_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUSG00000070283.5_108442736_108444145_1	chr9	-	999	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	488	0	-16	0	multi-exon	FALSE	canonical	3	428	junction_3	47.1301389770919	2134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACTGGATCTGTTTTCA	8631	False	NA	NA	False	NA	NA	NA	108444145	108442735	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
ENSMUSG00000070283.5_108443060_108444145_1	chr9	-	675	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	488	324	-16	0	multi-exon	FALSE	canonical	3	428	junction_3	47.1301389770919	1993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGCTCAGTTTGGC	8631	False	NA	-2	True	NA	NA	NA	108444145	108443059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
ENSMUSG00000070284.11_107926488_107928901_1	chr9	+	1556	9	FSM	ENSMUSG00000070284.11	ENSMUST00000112295.9	2702	9	47	1099	0	0	multi-exon	FALSE	canonical	3	94	junction_7	12.9807549857472	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGACTGGAAGTCAAGC	NA	False	NA	29	True	NA	NA	NA	107926487	107928901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ENSMUSG00000070284.11_107926488_107929116_1	chr9	+	1771	9	FSM	ENSMUSG00000070284.11	ENSMUST00000112295.9	2702	9	47	884	0	1	multi-exon	FALSE	canonical	3	94	junction_7	12.9807549857472	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGTCCTTGTTGTTCA	NA	False	NA	11	True	NA	NA	NA	107926487	107929116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ENSMUSG00000070284.11_107926488_107929116_2	chr9	+	1680	10	FSM	ENSMUSG00000070284.11	ENSMUST00000047947.9	1429	10	-36	-215	0	1	multi-exon	FALSE	canonical	3	24	junction_1	31.8309578326385	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGTCCTTGTTGTTCA	NA	False	NA	11	True	NA	NA	NA	107926487	107929116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107926620_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ENSMUSG00000070315.13_35035708_35087293_1	chr9	+	1347	7	Genic_Genomic	ENSMUSG00000070315.13	novel	639	3	NA	NA	6217	45075	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2265	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAGAAGCCTCCGCCCAC	NA	False	NA	NA	False	NA	NA	NA	35035707	35087293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_35036141_35037206_35037348_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
ENSMUSG00000070319.7_20805645_20809902_1	chr9	-	1070	11	NNC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	796.826511858133	1887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5156	False	NA	-1	True	AGTAAA	-16	NA	20809902	20805644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809393_20809464_20809673_20809721_20809839
ENSMUSG00000070319.7_20805645_20809902_2	chr9	-	1077	11	NNC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	784.593550827433	3389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5156	False	NA	-1	True	AGTAAA	-16	NA	20809902	20805644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_20805739_20805928_20806036_20806135_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
ENSMUSG00000070319.7_20805645_20809902_3	chr9	-	1075	11	NNC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	800.686511688563	4664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5156	False	NA	-1	True	AGTAAA	-16	NA	20809902	20805644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807508_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
ENSMUSG00000070319.7_20805645_20809902_4	chr9	-	1059	10	NNC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	839.761929814297	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5156	False	NA	-1	True	AGTAAA	-16	NA	20809902	20805644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809817
ENSMUSG00000070319.7_20805645_20809902_5	chr9	-	1081	11	NNC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	805.179011152179	5278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5156	False	NA	-1	True	AGTAAA	-16	NA	20809902	20805644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809055_20809178_20809273_20809379_20809464_20809673_20809721_20809839
ENSMUSG00000070319.7_20805645_20809902_6	chr9	-	1076	11	NNC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	804.599925428781	3370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5156	False	NA	-1	True	AGTAAA	-16	NA	20809902	20805644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809055_20809183_20809273_20809379_20809464_20809673_20809721_20809839
ENSMUSG00000070319.7_20805645_20809902_7	chr9	-	1075	10	NNC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	839.761929814297	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5156	False	NA	-1	True	AGTAAA	-16	NA	20809902	20805644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809801
ENSMUSG00000070327.15_119327353_119332813_1	chr11	+	2683	4	ISM	ENSMUSG00000070327.15	ENSMUST00000093902.12	16716	67	43427	45428	-41530	-45428	internal_fragment	FALSE	canonical	3	20	junction_3	3.09120616516523	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAATAGCAGCAGGGCCA	NA	False	NA	NA	False	NA	NA	NA	119327352	119332813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_119327887_119328443_119328638_119328798_119328955_119331014
ENSMUSG00000070348.6_144486050_144493606_1	chr7	-	1358	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	0	2382	0	885	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTAGTTTTCTATTAAT	NA	False	NA	-2	True	AATAGA	-18	NA	144493606	144486049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ENSMUSG00000070348.6_144486217_144493606_1	chr7	-	1191	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	0	2549	0	718	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTTTTTCCTTAA	NA	False	NA	-4	True	NA	NA	NA	144493606	144486216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ENSMUSG00000070371.12_127531810_127533805_1	chr7	-	989	4	ISM	ENSMUSG00000070371.12	ENSMUST00000153110.8	1016	5	846	0	796	0	3prime_fragment	FALSE	canonical	3	15	junction_3	37.1573231902766	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127533805	127531809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_127532287_127532542_127532665_127532738_127533005_127533681
ENSMUSG00000070371.12_127531810_127534651_1	chr7	-	870	4	NIC	ENSMUSG00000070371.12	novel	1052	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	36.3409777890836	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127534651	127531809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_127532287_127532542_127532665_127533561_127533800_127534618
ENSMUSG00000070371.12_127531810_127534651_2	chr7	-	1136	5	NIC	ENSMUSG00000070371.12	novel	1016	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	30.0863341070327	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127534651	127531809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_127532287_127532542_127532665_127532738_127533005_127533561_127533800_127534618
ENSMUSG00000070372.12_104730249_104771716_1	chr3	-	2929	10	NNC	ENSMUSG00000070372.12	novel	3193	10	NA	NA	0	-154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	505.947735552904	1874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTCCTTTCTGTC	9278	False	NA	-11	True	AATACA	-18	NA	104771716	104730248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747102_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ENSMUSG00000070372.12_104730249_104771716_2	chr3	-	2934	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	105	154	0	-154	multi-exon	FALSE	canonical	3	308	junction_2	396.900211360208	1870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTCCTTTCTGTC	9278	False	NA	-11	True	AATACA	-18	NA	104771716	104730248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ENSMUSG00000070372.12_104730249_104771821_1	chr3	-	3039	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	0	154	0	-154	multi-exon	FALSE	canonical	3	308	junction_2	396.900211360208	1874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTCCTTTCTGTC	9173	False	NA	-11	True	AATACA	-18	NA	104771821	104730248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ENSMUSG00000070394.11_69729381_69730441_1	chr11	+	436	3	NNC	ENSMUSG00000070394.11	novel	603	3	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	764.5	2742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTGGTGTCTTTATTC	NA	False	NA	NA	False	ATTAAA	-18	NA	69729380	69730441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_69729486_69730013_69730095_69730191
ENSMUSG00000070426.13_101669339_101714676_1	chr7	-	1364	9	FSM	ENSMUSG00000070426.13	ENSMUST00000089052.11	2344	9	0	980	0	0	multi-exon	FALSE	canonical	3	30	junction_8	114.601483410993	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGAATTGTCCCCCATTC	NA	False	NA	-2	True	AATATA	-24	NA	101714676	101669338	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714473
ENSMUSG00000070427.5_101660151_101664162_1	chr7	-	1720	7	NIC	ENSMUSG00000070427.5	novel	1594	7	NA	NA	3200	3941	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGTAGAGGCTCTCCAG	NA	False	NA	NA	False	NA	NA	NA	101664162	101660150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ENSMUSG00000070436.13_98994597_99002204_1	chr7	-	2138	5	NIC	ENSMUSG00000070436.13	novel	2173	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	649.473777376731	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTCTTTCTAAGACAAA	NA	False	NA	89	True	ATTAAA	-16	NA	99002204	98994596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002093
ENSMUSG00000070436.13_98994597_99002321_1	chr7	-	2255	5	NIC	ENSMUSG00000070436.13	novel	2173	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	88	junction_4	649.473777376731	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTCTTTCTAAGACAAA	NA	False	NA	89	True	ATTAAA	-16	NA	99002321	98994596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002093
ENSMUSG00000070436.13_98994597_99002321_2	chr7	-	2080	5	NNC	ENSMUSG00000070436.13	novel	2173	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_4	656.33694662117	2168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTCTTTCTAAGACAAA	NA	False	NA	89	True	ATTAAA	-16	NA	99002321	98994596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998663_99002259
ENSMUSG00000070436.13_98994597_99002446_3	chr7	-	2205	5	NNC	ENSMUSG00000070436.13	novel	2215	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_4	656.33694662117	2277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTCTTTCTAAGACAAA	NA	False	NA	89	True	ATTAAA	-16	NA	99002446	98994596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998663_99002259
ENSMUSG00000070493.4_129909997_129916130_1	chr5	-	734	4	FSM	ENSMUSG00000070493.4	ENSMUST00000094280.4	915	4	181	0	-16	0	multi-exon	FALSE	canonical	3	5311	junction_3	452.984424554409	30903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGCGTCCTTATTGT	2245	False	NA	-3	True	AATAAA	-18	NA	129916130	129909996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_129910238_129911269_129911421_129912774_129913025_129916038
ENSMUSG00000070605.5_146370031_146550672_1	chr4	+	691	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-163449	-4077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	299.280871423484	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146370030	146550672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146370163_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ENSMUSG00000070605.5_146493175_146550672_1	chr4	+	623	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40305	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	313.418550025361	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146493174	146550672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146493332_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ENSMUSG00000070605.5_146500228_146550672_1	chr4	+	611	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33252	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	321.464617026509	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500227	146550672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146500373_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ENSMUSG00000070605.5_146500228_146550672_2	chr4	+	961	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33252	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	259.684049482358	4425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500227	146550672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146500544_146502756_146502850_146508052_146508139_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ENSMUSG00000070605.5_146500228_146550672_3	chr4	+	984	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33252	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	258.749557165483	4377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500227	146550672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146500544_146502756_146502850_146508052_146508139_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ENSMUSG00000070605.5_146516841_146550672_1	chr4	+	599	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	300.104148588453	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146516986_146533486_146533533_146547961_146548026_146548878_146548988_146550437
ENSMUSG00000070605.5_146516841_146550672_2	chr4	+	704	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	304.163114134505	3651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146516986_146518646_146518740_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ENSMUSG00000070605.5_146516841_146550672_3	chr4	+	553	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	375.52363440934	835	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146516986_146547961_146548026_146548878_146548988_146550437
ENSMUSG00000070605.5_146516841_146550672_4	chr4	+	655	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	318.789115247055	4239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146517030_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ENSMUSG00000070605.5_146516841_146550672_5	chr4	+	611	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	291.29827926028	5527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ENSMUSG00000070605.5_146516841_146550672_6	chr4	+	622	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	306.569221384013	3197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_146516986_146533486_146533556_146547961_146548026_146548878_146548988_146550437
ENSMUSG00000070637.3_141160213_141163416_1	chr4	-	675	2	FSM	ENSMUSG00000070637.3	ENSMUST00000094544.3	905	2	0	230	0	-230	multi-exon	FALSE	canonical	3	14	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATGCCTCTGTCCTCTTC	NA	False	NA	1	True	ATTAAA	-24	NA	141163416	141160212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_141160768_141163296
ENSMUSG00000070637.3_141160217_141162686_1	chr4	-	686	2	NNC	ENSMUSG00000070637.3	novel	905	2	NA	NA	730	-234	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTATGCCTCTGTCCT	NA	False	NA	-3	True	ATTAAA	-20	NA	141162686	141160216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_141160768_141162551
ENSMUSG00000070699.6_28441417_28453296_1	chr7	+	1870	15	NNC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	61.1642569359803	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGGAAGTGCTGGCTG	268	False	NA	25	True	AATAAA	-33	NA	28441416	28453296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_28441708_28443666_28443763_28446143_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ENSMUSG00000070699.6_28441417_28453296_3	chr7	+	2159	15	NIC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	180	junction_5	20.6265382852444	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGGAAGTGCTGGCTG	268	False	NA	25	True	AATAAA	-33	NA	28441416	28453296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ENSMUSG00000070717.2_131653213_131802632_1	chr4	+	2585	18	Genic_Genomic	ENSMUSG00000070717.2	novel	2296	1	NA	NA	-148795	-1671	multi-exon	FALSE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGCGAGGCCCCGCCC	NA	False	NA	NA	False	NA	NA	NA	131653212	131802632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ENSMUSG00000070730.12_118967482_118987445_1	chr2	-	2177	13	NNC	ENSMUSG00000070730.12	novel	2249	13	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	78.4712880967017	680	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTTTGACTGTTTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	118987445	118967481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973164_118976814_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
ENSMUSG00000070732.3_91072811_91098015_1	chr1	+	3363	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	-14	502	0	0	multi-exon	TRUE	canonical	3	84	junction_2	27.1317771871533	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGACTCCAAGCTGTAT	4250	False	NA	32	True	TATAAA	-20	NA	91072810	91098015	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ENSMUSG00000070732.3_91072811_91098015_2	chr1	+	3272	15	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	30.8108945746435	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGACTCCAAGCTGTAT	4250	False	NA	32	True	TATAAA	-20	NA	91072810	91098015	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ENSMUSG00000070737.11_127019839_127023437_1	chr4	+	1027	3	NNC	ENSMUSG00000070737.11	novel	1120	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	45	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	NA	False	NA	7	True	TTTAAA	-4	NA	127019838	127023437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_127019894_127021611_127021793_127022646
ENSMUSG00000070814.18_13012481_13045351_1	chr7	-	3363	28	NIC	ENSMUSG00000070814.18	novel	3346	4	NA	NA	-32704	-1275	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	3254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATACCGCGCGGGGCATC	9273	False	NA	NA	False	AAGAAA	-4	NA	13045351	13012480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ENSMUSG00000070837.6_6998502_7006090_1	chr7	+	1208	8	NNC	ENSMUSG00000070837.7	novel	1320	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	174.695653719752	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2914	False	NA	20	True	ATTAAA	-21	NA	6998501	7006090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_6998548_6998659_6998834_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ENSMUSG00000070837.6_6998502_7006090_10	chr7	+	1374	7	NNC	ENSMUSG00000070837.7	novel	1320	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	170.358119527332	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2914	False	NA	20	True	ATTAAA	-21	NA	6998501	7006090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_6998834_6999212_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ENSMUSG00000070837.6_6998502_7006090_2	chr7	+	1191	6	NNC	ENSMUSG00000070837.7	novel	1401	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	179.534286419057	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2914	False	NA	20	True	ATTAAA	-21	NA	6998501	7006090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_6998712_6999490_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ENSMUSG00000070837.6_6998502_7006090_3	chr7	+	1006	6	NIC	ENSMUSG00000070837.7	novel	1401	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	147.489118242669	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2914	False	NA	20	True	ATTAAA	-21	NA	6998501	7006090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_6998712_6999266_6999301_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ENSMUSG00000070837.6_6998502_7006090_4	chr7	+	1185	8	NNC	ENSMUSG00000070837.7	novel	1320	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	175.625994078093	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2914	False	NA	20	True	ATTAAA	-21	NA	6998501	7006090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_6998525_6998659_6998834_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ENSMUSG00000070837.6_6998502_7006090_6	chr7	+	1191	7	NNC	ENSMUSG00000070837.7	novel	1320	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	172.381037884746	868	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2914	False	NA	20	True	ATTAAA	-21	NA	6998501	7006090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_6998705_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ENSMUSG00000070837.6_6998502_7006090_8	chr7	+	1108	8	NNC	ENSMUSG00000070837.7	novel	1401	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	154.398107210562	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2914	False	NA	20	True	ATTAAA	-21	NA	6998501	7006090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_6998525_6998614_6998712_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ENSMUSG00000070837.6_6998502_7006090_9	chr7	+	1063	8	NNC	ENSMUSG00000070837.7	novel	1401	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	158.962195480047	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2914	False	NA	20	True	ATTAAA	-21	NA	6998501	7006090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_6998525_6998659_6998712_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ENSMUSG00000070890.4_101795659_101798638_1	chr4	+	708	3	NNC	ENSMUSG00000070890.4	novel	1452	3	NA	NA	-1945	-1742	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	1	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATTGAGGAATTGGAAA	NA	False	NA	NA	False	ATTAAA	-27	NA	101795658	101798638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_101795732_101797576_101797891_101798317
ENSMUSG00000070953.14_34667904_34689801_1	chr2	-	2509	8	FSM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	123	336	-35	-336	multi-exon	FALSE	canonical	3	258	junction_7	62.9123134503371	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCTTCCATTATTTGGT	2760	False	NA	0	True	AATAAA	-18	NA	34689801	34667903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
ENSMUSG00000070953.14_34669229_34689801_1	chr2	-	1179	8	NNC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	142.543942383407	718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2760	False	NA	-22	True	AATAAA	-17	NA	34689801	34669228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_34669537_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
ENSMUSG00000070953.14_34669229_34689801_2	chr2	-	1184	8	FSM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	123	1661	-35	0	multi-exon	FALSE	canonical	3	258	junction_7	62.9123134503371	1340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2760	False	NA	-22	True	AATAAA	-17	NA	34689801	34669228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
ENSMUSG00000070953.14_34669229_34689801_3	chr2	-	1191	8	NNC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	146.419860368066	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2760	False	NA	-22	True	AATAAA	-17	NA	34689801	34669228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689755
ENSMUSG00000071054.13_56910634_56913283_1	chr17	+	962	7	ISM	ENSMUSG00000071054.13	ENSMUST00000182378.8	3628	14	5864	-3	664	3	3prime_fragment	FALSE	canonical	3	588	junction_4	28.0639151462039	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCCTTTACTTCAGACT	NA	False	NA	24	True	AATAAA	-15	NA	56910633	56913283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ENSMUSG00000071054.13_56912350_56913284_1	chr17	+	527	4	ISM	ENSMUSG00000071054.13	ENSMUST00000182378.8	3628	14	7580	-4	128	4	3prime_fragment	FALSE	canonical	3	588	junction_1	28.1937739383873	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCTTTACTTCAGACTT	NA	False	NA	25	True	AATAAA	-16	NA	56912349	56913284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_+_56912400_56912556_56912658_56912796_56912864_56912975
ENSMUSG00000071072.13_127894880_127912862_1	chr10	+	1664	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	57	279	0	15	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	6104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTCCTTTTAAGTG	903	False	NA	14	True	AATAAA	-15	NA	127894879	127912862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ENSMUSG00000071072.13_127894880_127912862_2	chr10	+	1649	7	NNC	ENSMUSG00000071072.13	novel	2000	8	NA	NA	0	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1429.30585328061	3511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTCCTTTTAAGTG	903	False	NA	14	True	AATAAA	-15	NA	127894879	127912862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910164_127911935
ENSMUSG00000071072.13_127895014_127912862_1	chr10	+	1530	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	191	279	134	15	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	4788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTCCTTTTAAGTG	1037	False	NA	14	True	AATAAA	-15	NA	127895013	127912862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ENSMUSG00000071072.13_127895014_127913141_1	chr10	+	1809	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	191	0	134	0	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	6145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAGTGTCACCTTGTTT	1037	False	NA	39	True	AATAAA	-40	NA	127895013	127913141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ENSMUSG00000071074.10_46559051_46562830_1	chr17	+	1357	9	FSM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	45	633	0	0	multi-exon	FALSE	canonical	3	158	junction_8	7.84219357067906	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGCCAAGTGCAGAATAT	2625	False	NA	-90	True	NA	NA	NA	46559050	46562830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491
ENSMUSG00000071074.10_46559051_46562943_1	chr17	+	1470	9	FSM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	45	520	0	0	multi-exon	FALSE	canonical	3	158	junction_8	7.84219357067906	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTAGCTCCTGTTGGC	2625	False	NA	23	True	ATTAAA	-18	NA	46559050	46562943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491
ENSMUSG00000071078.7_70583997_70586402_1	chr8	+	1243	4	NNC	ENSMUSG00000071078.7	novel	1161	5	NA	NA	0	3	intron_retention	FALSE	non_canonical	0	0	junction_3	279.964680312039	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCATTTGTGGTACTCT	461	False	NA	22	True	NA	NA	NA	70583996	70586402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_70584250_70584567_70584659_70585061_70585301_70585742
ENSMUSG00000071078.7_70585916_70591885_1	chr8	+	1230	9	NIC	ENSMUSG00000071078.7	novel	1161	5	NA	NA	1919	5486	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTACAGTGGCGCATG	2380	False	NA	NA	False	NA	NA	NA	70585915	70591885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
ENSMUSG00000071172.14_29251647_29261084_1	chr17	+	1306	5	NNC	ENSMUSG00000071172.14	novel	2618	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	858.014677904755	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGCCTGTTTTTCCTTG	NA	False	NA	37	True	ATTAAA	-28	NA	29251646	29261084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_29251761_29255214_29255423_29257463_29257634_29260180_29260268_29260357
ENSMUSG00000071172.14_29251647_29261084_2	chr17	+	1310	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	45	1263	0	0	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	18619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGCCTGTTTTTCCTTG	NA	False	NA	37	True	ATTAAA	-28	NA	29251646	29261084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ENSMUSG00000071172.14_29251647_29261225_1	chr17	+	1451	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	45	1122	0	8	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	20932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTCGAGCGAACCACTG	NA	False	NA	23	True	AATAAA	-23	NA	29251646	29261225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ENSMUSG00000071172.14_29251647_29261871_1	chr17	+	2097	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	45	476	0	0	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	24928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTGTGTCTAGAAGGT	NA	False	NA	15	True	AATAAA	-17	NA	29251646	29261871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ENSMUSG00000071180.6_108180980_108184773_1	chr13	+	985	3	FSM	ENSMUSG00000071180.6	ENSMUST00000095458.6	1918	3	0	933	0	0	multi-exon	FALSE	canonical	3	97	junction_1	47	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGCTTAAAGTATTCAAG	NA	False	NA	NA	False	AGTAAA	-32	NA	108180979	108184773	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_108181021_108182958_108183103_108183973
ENSMUSG00000071180.6_108180980_108185706_1	chr13	+	2065	3	FSM	ENSMUSG00000071180.6	ENSMUST00000226042.2	1092	3	-40	-933	0	0	multi-exon	FALSE	canonical	3	16	junction_1	87.5	1463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCCTGAGTTTTTGTCT	NA	False	NA	NA	False	AATAAA	-44	NA	108180979	108185706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_108181168_108182958_108183103_108183973
ENSMUSG00000071202.6_26009480_26011347_1	chr17	+	891	5	NIC	ENSMUSG00000071202.6	novel	2118	12	NA	NA	3926	1860	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	515	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATCAGTCGCCGGAAGT	NA	False	NA	NA	False	NA	NA	NA	26009479	26011347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011026
ENSMUSG00000071202.6_26009480_26011772_1	chr17	+	641	5	NNC	ENSMUSG00000071202.6	novel	2118	12	NA	NA	3926	2285	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCGGGAAACAGAGAGTATT	NA	False	NA	NA	False	NA	NA	NA	26009479	26011772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011701
ENSMUSG00000071252.7_77283659_77341475_1	chr13	+	1195	4	FSM	ENSMUSG00000071252.7	ENSMUST00000225605.2	1539	4	-14	358	0	-358	multi-exon	FALSE	canonical	3	23	junction_3	17.5562587763516	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCCGCTCATGTATT	NA	False	NA	NA	False	AATAAA	-26	NA	77283658	77341475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_77283750_77322971_77323104_77331719_77331889_77340672
ENSMUSG00000071267.12_22145941_22181455_1	chr17	-	3215	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-10	0	at_least_one_novel_splicesite	TRUE	canonical	3	30	junction_5	22.8508205541945	345	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181455	22145940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22172962_22181236
ENSMUSG00000071281.13_67853428_67872421_1	chr13	-	3959	4	FSM	ENSMUSG00000071281.13	ENSMUST00000130891.3	1103	4	24	-2880	-8	0	multi-exon	TRUE	canonical	3	31	junction_1	3.85861230093008	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGTTATTTTATTTAT	NA	False	NA	-1	True	NA	NA	NA	67872421	67853427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67872306
ENSMUSG00000071281.13_67855937_67872421_1	chr13	-	1450	4	FSM	ENSMUSG00000071281.13	ENSMUST00000130891.3	1103	4	24	-371	-8	371	multi-exon	FALSE	canonical	3	31	junction_1	3.85861230093008	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGGTATGTTACCTGGT	NA	False	NA	NA	False	NA	NA	NA	67872421	67855936	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67872306
ENSMUSG00000071302.11_129946432_129960502_1	chr8	-	506	4	FSM	ENSMUSG00000071302.11	ENSMUST00000186619.7	2337	4	-3	1834	-3	144	multi-exon	FALSE	canonical	3	23	junction_3	18.4451137763426	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGTAATCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	129960502	129946431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_129946633_129948024_129948086_129948304_129948432_129960385
ENSMUSG00000071337.12_86381286_86400831_1	chr6	+	835	7	NIC	ENSMUSG00000071337.12	novel	823	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_6	55.5230182496913	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCCTAGCCCAGAATGT	9766	False	NA	NA	False	NA	NA	NA	86381285	86400831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86400587
ENSMUSG00000071359.14_22579778_22607260_1	chr10	-	2682	7	NNC	ENSMUSG00000071359.14	novel	2873	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	90.384364429548	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTAAGTATTCCCCCT	NA	False	NA	-7	True	AATAAA	-21	NA	22607260	22579777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587886_22607014
ENSMUSG00000071379.3_17778227_17841934_1	chr12	+	1418	4	NIC	ENSMUSG00000071379.3	novel	697	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	39.0412886854702	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGAGTTTCCTGTGT	NA	False	NA	17	True	AATAAA	-5	NA	17778226	17841934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_17778310_17836147_17836550_17837545_17837652_17841107
ENSMUSG00000071379.3_17778227_17841934_2	chr12	+	1504	5	FSM	ENSMUSG00000071379.3	ENSMUST00000222944.2	697	5	0	-807	0	0	multi-exon	FALSE	canonical	3	5	junction_1	35.2304910553344	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGAGTTTCCTGTGT	NA	False	NA	17	True	AATAAA	-5	NA	17778226	17841934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_17778310_17817214_17817301_17836147_17836550_17837545_17837652_17841107
ENSMUSG00000071415.7_97668864_97673209_1	chr11	-	494	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	54	511	-1	0	multi-exon	FALSE	canonical	3	11120	junction_4	1307.0006455622	193963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCTGGTCTTCTTGAC	NA	False	NA	-35	True	ATTAAA	-11	NA	97673209	97668863	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
ENSMUSG00000071456.7_3456229_3476753_1	chr12	-	1017	3	FSM	ENSMUSG00000071456.7	ENSMUST00000095903.7	1923	3	-13	919	-6	477	multi-exon	FALSE	canonical	3	62	junction_1	5.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGAAATTTGATCCTAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	3476753	3456228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_3456712_3457643_3457925_3476500
ENSMUSG00000071470.5_51026705_51033185_1	chr14	-	1470	4	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	82.8908251188809	827	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCTTTTCTTTTTGGC	8876	False	NA	1	True	AATAAA	-20	NA	51033185	51026704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_51027470_51029468_51029764_51031014_51031332_51033092
ENSMUSG00000071470.5_51026705_51033185_2	chr14	-	1579	5	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	80.7971998277168	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCTTTTCTTTTTGGC	8876	False	NA	1	True	AATAAA	-20	NA	51033185	51026704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_51027470_51027592_51027663_51029429_51029764_51031014_51031332_51033092
ENSMUSG00000071528.5_47071903_47079086_1	chr19	-	233	3	NNC	ENSMUSG00000071528.5	novel	362	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2955	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	NA	False	NA	0	True	AATAAA	-17	NA	47079086	47071902	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_47072009_47074393_47074487_47079052
ENSMUSG00000071528.5_47071903_47079086_2	chr19	-	359	4	NNC	ENSMUSG00000071528.5	novel	362	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	2433.92691390317	28747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	NA	False	NA	0	True	AATAAA	-17	NA	47079086	47071902	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_47072009_47074393_47074487_47074583_47074669_47079011
ENSMUSG00000071533.12_55835869_55850051_1	chr16	-	2368	6	NNC	ENSMUSG00000071533.12	novel	2200	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	1006.61305375998	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55850051	55835868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55844824_55845001_55849965
ENSMUSG00000071533.12_55835869_55850051_2	chr16	-	2443	5	FSM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	-12	-1493	-2	0	multi-exon	FALSE	canonical	3	279	junction_4	876.141113063415	2106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55850051	55835868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55845001_55849965
ENSMUSG00000071533.12_55837362_55850051_1	chr16	-	751	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	51	1493	-2	0	multi-exon	FALSE	canonical	3	1624	junction_1	369.138439477657	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTTTATATACAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	55850051	55837361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
ENSMUSG00000071533.12_55837362_55850051_2	chr16	-	875	6	NNC	ENSMUSG00000071533.12	novel	938	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	1006.61305375998	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTTTATATACAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	55850051	55837361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55844824_55845001_55849965
ENSMUSG00000071533.12_55837362_55850051_3	chr16	-	699	5	FSM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	8	1493	-2	0	multi-exon	FALSE	canonical	3	494	junction_4	790.763357459107	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTTTATATACAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	55850051	55837361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55849965
ENSMUSG00000071533.12_55838649_55850051_1	chr16	-	566	4	ISM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	8	2780	-2	-166	5prime_fragment	FALSE	canonical	3	494	junction_3	909.968131310103	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTACACACGTGCACAT	NA	False	NA	NA	False	AATAAA	-26	NA	55850051	55838648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_55838891_55842417_55842493_55844586_55844750_55849965
ENSMUSG00000071533.12_55838649_55850051_2	chr16	-	817	4	ISM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	-12	1287	-2	-166	5prime_fragment	FALSE	canonical	3	279	junction_3	1010.902676929	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTACACACGTGCACAT	NA	False	NA	NA	False	AATAAA	-26	NA	55850051	55838648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_55838891_55842417_55842493_55844586_55845001_55849965
ENSMUSG00000071553.11_30546998_30564475_1	chr6	+	1033	7	ISM	ENSMUSG00000071553.11	ENSMUST00000096066.5	1388	11	5417	0	357	0	3prime_fragment	FALSE	canonical	2	2	junction_5	2.98142396999972	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTCTGGTCATTTCCT	2006	False	NA	NA	False	ATTAAA	-22	NA	30546997	30564475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_+_30547206_30549240_30549340_30550743_30550855_30551964_30552056_30554162_30554363_30557670_30557756_30564236
ENSMUSG00000071632.11_18655331_18658910_1	chr16	+	1305	4	NNC	ENSMUSG00000071632.11	novel	1281	3	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_2	83.4386001800126	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	17	True	ATTAAA	-17	NA	18655330	18658910	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_18655624_18657839_18658616_18658644_18658664_18658693
ENSMUSG00000071632.11_18655331_18658910_3	chr16	+	1212	4	NNC	ENSMUSG00000071632.11	novel	1281	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	72.2695571377664	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	17	True	ATTAAA	-17	NA	18655330	18658910	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_18655370_18655455_18655624_18657839_18658622_18658687
ENSMUSG00000071644.11_8944405_8955546_1	chr19	+	1567	10	FSM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	0	297	0	-297	multi-exon	FALSE	canonical	3	5201	junction_1	1272.81743475733	65078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTGTCCTGCCTCC	843	False	NA	13	True	ATTAAA	-18	NA	8944404	8955546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ENSMUSG00000071644.11_8944559_8955546_1	chr19	+	1408	10	NNC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	154	-297	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2989.51105048763	63936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTGTCCTGCCTCC	997	False	NA	13	True	ATTAAA	-18	NA	8944558	8955546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950272_8950473_8954681_8954855_8954948_8955074_8955307
ENSMUSG00000071644.11_8944559_8955546_2	chr19	+	1413	10	FSM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	154	297	154	-297	multi-exon	FALSE	canonical	3	5201	junction_1	1272.81743475733	64625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTGTCCTGCCTCC	997	False	NA	13	True	ATTAAA	-18	NA	8944558	8955546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ENSMUSG00000071646.10_8919239_8926356_1	chr19	+	1776	14	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	0	3311	0	1294	5prime_fragment	FALSE	canonical	3	728	junction_3	81.340252559176	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTCCCCCTATACAAC	3469	False	NA	NA	False	NA	NA	NA	8919238	8926356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314
ENSMUSG00000071646.10_8919239_8929667_1	chr19	+	1015	7	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	338.777540905861	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCAGCTATTCTGTGTG	3469	False	NA	20	True	AATAAA	-24	NA	8919238	8929667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923678_8929551
ENSMUSG00000071646.10_8925713_8929667_1	chr19	+	1449	6	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	6474	0	1949	0	3prime_fragment	FALSE	canonical	3	833	junction_3	26.499811320083	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCAGCTATTCTGTGTG	3582	False	NA	20	True	AATAAA	-24	NA	8925712	8929667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_+_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ENSMUSG00000071649.7_8897848_8904600_1	chr19	+	1493	5	FSM	ENSMUSG00000071649.7	ENSMUST00000096243.7	1603	5	110	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	18.060661671157	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTCATGGTTTCCTTC	4822	False	NA	19	True	AATAAA	-16	NA	8897847	8904600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8898013_8899169_8899345_8902901_8903263_8903445_8903737_8904099
ENSMUSG00000071650.7_8875489_8894036_1	chr19	+	3765	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	262.745774761478	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	1917	False	NA	-56	True	GATAAA	-42	NA	8875488	8894036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886046_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ENSMUSG00000071653.10_8866263_8868110_1	chr19	+	716	5	FSM	ENSMUSG00000071653.10	ENSMUST00000185488.7	500	5	-16	-200	0	0	multi-exon	FALSE	canonical	3	137	junction_2	1592.05511839258	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATGAAGTGCAGCAGGG	NA	False	NA	32	True	AATAAA	-21	NA	8866262	8868110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8866329_8866487_8866613_8867000_8867092_8867366_8867465_8867774
ENSMUSG00000071653.10_8866263_8868110_2	chr19	+	625	4	FSM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	46	135	0	0	multi-exon	FALSE	canonical	3	2965	junction_2	196.086715511276	10844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATGAAGTGCAGCAGGG	NA	False	NA	32	True	AATAAA	-21	NA	8866262	8868110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774
ENSMUSG00000071654.7_8857634_8858287_1	chr19	-	565	2	FSM	ENSMUSG00000071654.7	ENSMUST00000096253.7	821	2	0	256	0	-256	multi-exon	FALSE	canonical	3	500	junction_1	0	1888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTCGCAGCTGGACA	NA	False	NA	-11	True	AATAAA	-18	NA	8858287	8857633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8857981_8858069
ENSMUSG00000071655.13_8848860_8853028_1	chr19	+	1189	9	FSM	ENSMUSG00000071655.13	ENSMUST00000238036.2	1291	9	-97	199	0	0	multi-exon	FALSE	canonical	3	1115	junction_4	107.257575490032	9493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGCTCCTTCCAGA	5849	False	NA	33	True	AATAAA	-21	NA	8848859	8853028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ENSMUSG00000071655.13_8848957_8853028_1	chr19	+	1087	9	NNC	ENSMUSG00000071655.13	novel	1291	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	452.122217989782	9302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGCTCCTTCCAGA	5946	False	NA	33	True	AATAAA	-21	NA	8848956	8853028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_8849121_8849227_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ENSMUSG00000071657.13_8814831_8820771_1	chr19	+	1323	4	ISM	ENSMUSG00000071657.13	ENSMUST00000171649.8	1962	12	0	5276	0	3164	5prime_fragment	FALSE	canonical	3	57	junction_1	48.787521173167	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAATGTCATTTTTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	8814830	8820771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_+_8815229_8816939_8817149_8818471_8818789_8820372
ENSMUSG00000071657.13_8816754_8826031_1	chr19	+	1734	11	FSM	ENSMUSG00000071657.13	ENSMUST00000160556.8	1795	11	62	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_6	47.8256207487158	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8816753	8826031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ENSMUSG00000071658.6_8814831_8826031_1	chr19	-	1946	12	NIC	ENSMUSG00000071658.6	novel	1643	3	NA	NA	-9473	-534	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTCGTACCCGCATGGA	NA	False	NA	NA	False	NA	NA	NA	8826031	8814830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_8815229_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ENSMUSG00000071658.6_8815051_8826031_1	chr19	-	1726	12	NIC	ENSMUSG00000071658.6	novel	1643	3	NA	NA	-9473	-754	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCCGAGCGCCCCCAGT	NA	False	NA	NA	False	NA	NA	NA	8826031	8815050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_8815229_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ENSMUSG00000071658.6_8815093_8816574_1	chr19	-	863	3	FSM	ENSMUSG00000071658.6	ENSMUST00000096259.6	1643	3	-16	796	-16	-796	multi-exon	TRUE	canonical	3	189	junction_2	8	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCGTTAGACATTGTAAG	4746	False	NA	77	True	NA	NA	NA	8816574	8815092	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8815636_8815917_8816018_8816354
ENSMUSG00000071660.11_8787492_8796658_2	chr19	-	2417	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	39	1053	0	1008	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCTTCAGCTGTCACT	1924	False	NA	-10	True	AATAAA	-16	NA	8796658	8787491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
ENSMUSG00000071660.11_8787492_8796658_3	chr19	-	1125	5	NNC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	0	1008	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	101.019800039398	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCTTCAGCTGTCACT	1924	False	NA	-10	True	AATAAA	-16	NA	8796658	8787491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_8787707_8788998_8789203_8793217_8793401_8795799_8796049_8796384
ENSMUSG00000071660.11_8788660_8796658_1	chr19	-	1249	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	39	2221	0	0	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTGTGGTGGCGCAC	1924	False	NA	NA	False	ATTAAA	-12	NA	8796658	8788659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
ENSMUSG00000071662.5_8770491_8775941_1	chr19	-	730	7	NIC	ENSMUSG00000071662.5	novel	890	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	548.478324295703	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTGGTTTTATGT	NA	False	NA	-1	True	ATTAAA	-17	NA	8775941	8770490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8775587_8775698_8775822
ENSMUSG00000071708.12_156228692_156275042_1	chrX	-	2394	10	NIC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	342	junction_4	49.2072964578563	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGATTAGCAGTGCTTCA	NA	False	NA	-46	True	ATTAAA	-27	NA	156275042	156228691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ENSMUSG00000071708.12_156228692_156275042_2	chrX	-	1539	10	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_4	144.681856174756	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGATTAGCAGTGCTTCA	NA	False	NA	-46	True	ATTAAA	-27	NA	156275042	156228691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156244177_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ENSMUSG00000071708.12_156228692_156275042_3	chrX	-	1629	11	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	141.867156170835	2147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGATTAGCAGTGCTTCA	NA	False	NA	-46	True	ATTAAA	-27	NA	156275042	156228691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243413_156244177_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ENSMUSG00000071708.12_156228692_156275042_5	chrX	-	1638	11	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	141.867156170835	2098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGATTAGCAGTGCTTCA	NA	False	NA	-46	True	ATTAAA	-27	NA	156275042	156228691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243422_156244177_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ENSMUSG00000071711.13_78290912_78295003_1	chr15	+	794	2	FSM	ENSMUSG00000071711.13	ENSMUST00000229791.2	522	2	296	-568	0	227	multi-exon	FALSE	canonical	1	3	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAAGCATCTCGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	78290911	78295003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_78290945_78294242
ENSMUSG00000071773.5_36477457_36481929_1	chrX	-	751	4	ISM	ENSMUSG00000071773.5	ENSMUST00000115210.2	883	5	3982	0	3982	0	3prime_fragment	FALSE	canonical	3	106	junction_3	6.34209919681348	373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGAATTCTCGACATGT	NA	False	NA	-23	True	AATAAA	-1	NA	36481929	36477456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_36477701_36479202_36479249_36481305_36481649_36481811
ENSMUSG00000071793.13_19834749_20042010_1	chr8	+	942	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-13	-3878	multi-exon	FALSE	canonical	3	906	junction_2	214.058403245469	441	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGCTCAGCGAGAGCCT	NA	False	NA	NA	False	AGTAAA	-27	NA	19834748	20042010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ENSMUSG00000071793.13_19834749_20042010_2	chr8	+	1109	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-13	-3878	multi-exon	FALSE	canonical	3	606	junction_2	335.627770007191	612	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGCTCAGCGAGAGCCT	NA	False	NA	NA	False	AGTAAA	-27	NA	19834748	20042010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ENSMUSG00000071793.13_19834749_20043149_1	chr8	+	2081	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-13	-2739	multi-exon	FALSE	canonical	3	906	junction_2	214.058403245469	1184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTTTATGAGTGTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	19834748	20043149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ENSMUSG00000071793.13_19834749_20043149_3	chr8	+	1905	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-13	-2739	multi-exon	FALSE	non_canonical	0	0	junction_5	531.296677949336	968	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTTTATGAGTGTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	19834748	20043149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811_20042916_20043091
ENSMUSG00000071793.13_19834749_20045128_1	chr8	+	4227	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-13	-760	multi-exon	FALSE	canonical	3	606	junction_2	335.627770007191	3259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19834748	20045128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ENSMUSG00000071793.13_20016466_20042010_1	chr8	+	1047	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	0	-3878	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	265.429369136123	532	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGCTCAGCGAGAGCCT	NA	False	NA	NA	False	AGTAAA	-27	NA	20016465	20042010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ENSMUSG00000071793.13_20016466_20042225_2	chr8	+	1253	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	0	-3663	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	548.643782430823	372	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAGTCTTGAGATATT	NA	False	NA	NA	False	ATTAAA	-25	NA	20016465	20042225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_20016689_20030550_20030748_20035860_20036160_20039783_20039904_20041811
ENSMUSG00000071793.13_20016466_20043149_1	chr8	+	2010	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	0	-2739	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	519.250844968017	1093	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTTTATGAGTGTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	20016465	20043149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811_20042916_20043091
ENSMUSG00000071793.13_20016466_20043149_3	chr8	+	2186	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	0	-2739	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	265.429369136123	1349	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTTTATGAGTGTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	20016465	20043149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ENSMUSG00000071796.14_20119987_20169269_1	chr8	+	1302	6	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-23861	-3725	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	509.882888514608	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGAGCCTCATCTTTTCT	NA	False	NA	NA	False	AGTAAA	-37	NA	20119986	20169269	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_20120262_20143455_20143649_20157802_20158009_20163109_20163409_20167037_20167158_20169060
ENSMUSG00000071866.13_6365868_6369817_1	chr11	+	729	4	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17590.1796087097	11406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365867	6369817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_6365995_6368225_6368315_6369112_6369286_6369477
ENSMUSG00000071866.13_6365868_6369817_10	chr11	+	572	4	NIC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	108	junction_3	17797.2392116181	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365867	6369817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_6365980_6368100_6368132_6368225_6368315_6369477
ENSMUSG00000071866.13_6365868_6369817_11	chr11	+	733	5	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16349.7512519304	164196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365867	6369817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_6365980_6368100_6368132_6368237_6368315_6369112_6369286_6369477
ENSMUSG00000071866.13_6365868_6369817_2	chr11	+	716	5	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16349.7512519304	27569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365867	6369817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_6365980_6368100_6368132_6368254_6368315_6369112_6369286_6369477
ENSMUSG00000071866.13_6365868_6369817_3	chr11	+	839	4	FSM	ENSMUSG00000071866.13	ENSMUST00000137829.8	677	4	-8	-154	0	0	multi-exon	FALSE	canonical	3	36680	junction_3	786.740674484858	13915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365867	6369817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_6365980_6368100_6368315_6369112_6369286_6369477
ENSMUSG00000071866.13_6365868_6369817_4	chr11	+	538	6	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15042.0886528434	6370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365867	6369817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112_6369286_6369477_6369530_6369736
ENSMUSG00000071866.13_6365868_6369817_5	chr11	+	757	5	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16128.6470914333	198272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365867	6369817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_6365992_6368100_6368132_6368225_6368315_6369112_6369286_6369477
ENSMUSG00000071866.13_6365868_6369817_6	chr11	+	714	4	NIC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17590.1796087097	5651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365867	6369817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_6365980_6368225_6368315_6369112_6369286_6369477
ENSMUSG00000071866.13_6365868_6369817_7	chr11	+	733	5	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16128.6470914333	108461	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365867	6369817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_6365968_6368100_6368132_6368225_6368315_6369112_6369286_6369477
ENSMUSG00000071866.13_6365868_6369817_8	chr11	+	755	5	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	16404.7920666493	223677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365867	6369817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112_6369296_6369477
ENSMUSG00000071866.13_6365868_6369817_9	chr11	+	735	5	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16128.2142436012	46175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365867	6369817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_6365980_6368110_6368132_6368225_6368315_6369112_6369286_6369477
ENSMUSG00000072066.8_62751428_62771996_2	chr13	-	2039	3	FSM	ENSMUSG00000072066.8	ENSMUST00000201563.4	2640	3	0	601	0	-601	multi-exon	FALSE	canonical	3	9	junction_2	2	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGACCAGTCG	NA	False	NA	-21	True	NA	NA	NA	62771996	62751427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62753195_62755186_62755314_62771851
ENSMUSG00000072082.8_24442204_24470302_1	chr17	-	3020	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	81	1032	-10	-1032	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	1635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8756	False	NA	-4	True	AATAAA	-19	NA	24470302	24442203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ENSMUSG00000072082.8_24442204_24470383_1	chr17	-	3097	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	0	-1032	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	211.338951316954	1869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8675	False	NA	-4	True	AATAAA	-19	NA	24470383	24442203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_24443321_24443881_24444044_24445444_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ENSMUSG00000072082.8_24442204_24470383_2	chr17	-	3096	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	0	-1032	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	206.336042658572	1832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8675	False	NA	-4	True	AATAAA	-19	NA	24470383	24442203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449373_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ENSMUSG00000072082.8_24442301_24470383_1	chr17	-	3004	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	0	1129	0	-1129	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCCTGTCTTTATTT	8675	False	NA	-13	True	NA	NA	NA	24470383	24442300	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ENSMUSG00000072082.8_24442956_24470302_1	chr17	-	2268	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	81	1784	-10	976	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGAGCGGTGTTCACCA	8756	False	NA	NA	False	NA	NA	NA	24470302	24442955	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ENSMUSG00000072235.7_98829306_98935207_1	chr15	-	1225	3	Fusion	ENSMUSG00000023004.9_ENSMUSG00000072235.7	novel	1743	4	NA	NA	-83623	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1379	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	2193	False	NA	NA	False	AGTAAA	-18	NA	98935207	98829305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr15_-_98829466_98847918_98848837_98935060
ENSMUSG00000072235.7_98847718_98851432_1	chr15	-	1651	4	FSM	ENSMUSG00000072235.7	ENSMUST00000097014.7	1803	4	152	0	152	0	multi-exon	FALSE	canonical	3	1268	junction_3	1593.04014038846	7920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTGTGTTCTATATT	NA	False	NA	-4	True	AATAAA	-19	NA	98851432	98847717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851331
ENSMUSG00000072244.12_103868044_103882629_1	chr7	+	2039	7	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	0	424	intron_retention	FALSE	canonical	0	0	junction_6	274.000861718029	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCACAGACTCAGTCCAT	NA	False	NA	NA	False	NA	NA	NA	103868043	103882629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881108_103881573
ENSMUSG00000072244.12_103868044_103884111_1	chr7	+	3496	8	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	0	-248	intron_retention	TRUE	canonical	0	0	junction_4	301.194628241661	1476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	13	True	AATAAA	-14	NA	103868043	103884111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877612_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ENSMUSG00000072258.12_183170325_183190194_1	chr1	+	1558	11	FSM	ENSMUSG00000072258.12	ENSMUST00000192076.3	2384	11	0	826	0	-826	multi-exon	FALSE	canonical	3	59	junction_7	9.96042167782067	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTACAGTGTAGTGGTTC	NA	False	NA	NA	False	NA	NA	NA	183170324	183190194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
ENSMUSG00000072419.6_48130840_48139541_1	chr16	+	1333	8	NNC	ENSMUSG00000072419.6	novel	1948	7	NA	NA	0	-545	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	201.815231722242	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATGGCTTTATCATGT	NA	False	NA	NA	False	AATATA	-13	NA	48130839	48139541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995_48139290_48139359
ENSMUSG00000072419.6_48130840_48139541_2	chr16	+	1403	7	FSM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	0	545	0	-545	multi-exon	FALSE	canonical	3	478	junction_4	51.0968579160098	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATGGCTTTATCATGT	NA	False	NA	NA	False	AATATA	-13	NA	48130839	48139541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
ENSMUSG00000072419.6_48130840_48139794_1	chr16	+	1586	8	NNC	ENSMUSG00000072419.6	novel	1948	7	NA	NA	0	-292	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	201.815231722242	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTCCTCGATTGATTT	NA	False	NA	-64	True	NA	NA	NA	48130839	48139794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995_48139290_48139359
ENSMUSG00000072419.6_48130840_48139922_1	chr16	+	1784	7	FSM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	0	164	0	-164	multi-exon	FALSE	canonical	3	478	junction_4	51.0968579160098	2056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTCTTGAGTATTT	NA	False	NA	64	True	NA	NA	NA	48130839	48139922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
ENSMUSG00000072419.6_48130840_48139922_2	chr16	+	1714	8	NNC	ENSMUSG00000072419.6	novel	1948	7	NA	NA	0	-164	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	201.815231722242	2065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTCTTGAGTATTT	NA	False	NA	64	True	NA	NA	NA	48130839	48139922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995_48139290_48139359
ENSMUSG00000072479.11_72180838_72192518_1	chrX	+	2944	5	NNC	ENSMUSG00000072479.11	novel	727	8	NA	NA	-11564	-8939	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAGGGGAGGAGGGGAG	NA	False	NA	NA	False	NA	NA	NA	72180837	72192518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_72183280_72185114_72185281_72186572_72186670_72186962_72187031_72192347
ENSMUSG00000072479.11_72192402_72202005_1	chrX	+	1080	8	NIC	ENSMUSG00000072479.11	novel	1652	9	NA	NA	0	306	combination_of_known_splicesites	FALSE	canonical	3	121	junction_7	152.49623615295	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72192401	72202005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_72192503_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72201393_72201499_72201594
ENSMUSG00000072479.11_72192402_72202005_2	chrX	+	1102	9	NNC	ENSMUSG00000072479.11	novel	1652	9	NA	NA	0	306	at_least_one_novel_splicesite	TRUE	canonical	3	104	junction_1	165.884749148317	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72192401	72202005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_72192426_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72200075_72200175_72201393_72201499_72201594
ENSMUSG00000072479.11_72192402_72202005_3	chrX	+	1187	9	NNC	ENSMUSG00000072479.11	novel	1652	9	NA	NA	0	306	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	174.785582929485	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72192401	72202005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_72192511_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72200075_72200175_72201393_72201499_72201594
ENSMUSG00000072479.11_72192402_72202005_4	chrX	+	1179	9	FSM	ENSMUSG00000072479.11	ENSMUST00000114518.9	1652	9	0	473	0	306	multi-exon	FALSE	canonical	3	121	junction_8	146.338167868127	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72192401	72202005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72192503_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72200075_72200175_72201393_72201499_72201594
ENSMUSG00000072479.11_72192402_72202005_5	chrX	+	1003	8	NNC	ENSMUSG00000072479.11	novel	1652	9	NA	NA	0	306	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_1	175.455093388361	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72192401	72202005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_72192426_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72201393_72201499_72201594
ENSMUSG00000072582.10_86574811_86581016_1	chr11	+	865	3	FSM	ENSMUSG00000072582.10	ENSMUST00000108021.2	3132	3	0	2267	0	-2267	multi-exon	FALSE	non_canonical	0	0	junction_2	3	1822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTCCCATGTTCCTCT	NA	False	NA	19	True	AATAAA	-26	NA	86574810	86581016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_86574950_86578861_86578956_86580384
ENSMUSG00000072591.11_128671997_128677757_1	chr5	-	989	2	ISM	ENSMUSG00000072591.11	ENSMUST00000091324.11	2403	7	-6	15805	0	-10753	5prime_fragment	FALSE	canonical	1	1	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTATTTATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	128677757	128671996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_128672829_128677600
ENSMUSG00000072640.12_78717430_78730101_2	chr11	+	420	4	FSM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	20	7595	0	0	multi-exon	FALSE	canonical	3	164	junction_1	44.0782133132559	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGAGGTGGTTCTCGT	NA	False	NA	20	True	AAGAAA	-13	NA	78717429	78730101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948
ENSMUSG00000072676.13_25924421_25928067_1	chr14	-	1421	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	29	697	0	173	multi-exon	FALSE	canonical	3	137	junction_1	7.40870359029762	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACATGCATCTGAGTT	NA	False	NA	-5	True	AGTAAA	-18	NA	25928067	25924420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
ENSMUSG00000072676.13_25924594_25928067_1	chr14	-	1248	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	29	870	0	0	multi-exon	FALSE	canonical	3	137	junction_1	7.40870359029762	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTCTCTTGATCGTGA	NA	False	NA	-13	True	NA	NA	NA	25928067	25924593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
ENSMUSG00000072761.11_17514705_17539892_1	chr17	+	2052	4	FSM	ENSMUSG00000072761.11	ENSMUST00000186431.7	526	4	0	-1526	0	119	multi-exon	FALSE	canonical	3	37	junction_1	17.5689119374726	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTAAGGGATGCAACAT	NA	False	NA	NA	False	NA	NA	NA	17514704	17539892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_17514852_17536339_17536467_17536705_17536767_17538175
ENSMUSG00000072761.11_17514705_17540056_1	chr17	+	2216	4	FSM	ENSMUSG00000072761.11	ENSMUST00000186431.7	526	4	0	-1690	0	283	multi-exon	FALSE	canonical	3	37	junction_1	17.5689119374726	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCCAAGTATGCTGCTC	NA	False	NA	21	True	NA	NA	NA	17514704	17540056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_17514852_17536339_17536467_17536705_17536767_17538175
ENSMUSG00000072762.10_109883381_109899584_1	chr5	-	2597	4	FSM	ENSMUSG00000072762.10	ENSMUST00000112547.8	2001	4	-121	-475	-121	475	multi-exon	FALSE	canonical	3	85	junction_1	29.0631496343164	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGCCATATGCCTTTTT	7825	False	NA	NA	False	NA	NA	NA	109899584	109883380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_109885666_109886815_109886877_109887064_109887192_109899460
ENSMUSG00000072762.10_109886697_109899584_1	chr5	-	431	3	FSM	ENSMUSG00000072762.10	ENSMUST00000100937.4	599	3	168	0	-121	0	multi-exon	FALSE	canonical	3	125	junction_2	15.5	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTTGATTAAATTCTCA	7825	False	NA	NA	False	NA	NA	NA	109899584	109886696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_109886877_109887064_109887192_109899460
ENSMUSG00000072763.3_109822411_109838671_1	chr5	-	3105	4	FSM	ENSMUSG00000072763.3	ENSMUST00000092720.4	3341	4	236	0	236	0	multi-exon	FALSE	canonical	3	41	junction_1	21.5148527508066	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGGTATC	6367	False	NA	-3	True	NA	NA	NA	109838671	109822410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_109825258_109826379_109826441_109826628_109826756_109838601
ENSMUSG00000072763.3_109825062_109838671_1	chr5	-	454	4	FSM	ENSMUSG00000072763.3	ENSMUST00000092720.4	3341	4	236	2651	236	-2651	multi-exon	FALSE	canonical	3	41	junction_1	21.5148527508066	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTACAAATGCAATCAATG	6367	False	NA	NA	False	NA	NA	NA	109838671	109825061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_109825258_109826379_109826441_109826628_109826756_109838601
ENSMUSG00000072763.3_109826235_109838671_1	chr5	-	403	3	ISM	ENSMUSG00000072763.3	ENSMUST00000092720.4	3341	4	236	3824	236	-3824	5prime_fragment	FALSE	canonical	3	55	junction_1	18.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAATGTCAGGTGTCTGA	6367	False	NA	NA	False	NA	NA	NA	109838671	109826234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_109826441_109826628_109826756_109838601
ENSMUSG00000072770.10_125026910_125031157_1	chr6	+	1122	4	NIC	ENSMUSG00000072770.10	novel	1498	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	51.6978400580398	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTGTCGTTGTTCTTT	NA	False	NA	17	True	ACTAAA	-24	NA	125026909	125031157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_125027016_125027396_125027613_125027809_125027905_125030452
ENSMUSG00000072770.10_125026910_125031157_2	chr6	+	1240	5	FSM	ENSMUSG00000072770.10	ENSMUST00000112414.8	1498	5	258	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	12.3490890352285	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTGTCGTTGTTCTTT	NA	False	NA	17	True	ACTAAA	-24	NA	125026909	125031157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452
ENSMUSG00000072772.4_124716149_124718028_1	chr6	-	551	3	FSM	ENSMUSG00000072772.4	ENSMUST00000004389.6	863	3	309	3	0	0	multi-exon	FALSE	canonical	3	807	junction_1	71.5	4594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGTGTCAGTCATT	9252	False	NA	NA	False	AATAAA	-14	NA	124718028	124716148	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124716377_124717481_124717659_124717882
ENSMUSG00000072774.11_104950845_105007666_2	chr5	-	1282	7	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	-7	10190	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	86.7437157506077	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGAAATTTTCTGCAAT	NA	False	NA	NA	False	AATAAA	-22	NA	105007666	104950844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_104951336_104952168_104952309_104953146_104953426_104963251_104963302_104964564_104964626_104964862_104964990_105007532
ENSMUSG00000072872.4_100208623_100264295_1	chr6	-	1255	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	151	3097	151	349	multi-exon	FALSE	canonical	3	260	junction_4	17.7552809045647	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGCAACGCTGGTGCT	NA	False	NA	NA	False	NA	NA	NA	100264295	100208622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
ENSMUSG00000072872.4_100208821_100264295_1	chr6	-	1057	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	151	3295	151	151	multi-exon	FALSE	canonical	3	260	junction_4	17.7552809045647	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGGTTTTGTTTCTGTT	NA	False	NA	NA	False	TATAAA	-36	NA	100264295	100208820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
ENSMUSG00000072898.4_59099147_59101565_1	chr11	-	1286	7	NIC	ENSMUSG00000072898.4	novel	471	2	NA	NA	-2019	-75	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTCTCGCTAACGTGCCC	NA	False	NA	NA	False	NA	NA	NA	59101565	59099146	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_59099500_59099645_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101052
ENSMUSG00000072919.5_87267814_87271882_2	chr12	-	761	4	NNC	ENSMUSG00000072919.5	novel	1626	8	NA	NA	8448	0	at_least_one_novel_splicesite	TRUE	canonical	2	11	junction_2	15.7973274814304	318	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTAGAAAATGATAAAATT	NA	False	NA	NA	False	NA	NA	NA	87271882	87267813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_87268219_87269818_87269953_87270931_87271084_87271812
ENSMUSG00000072919.5_87268029_87271882_1	chr12	-	546	4	NNC	ENSMUSG00000072919.5	novel	1101	6	NA	NA	8448	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	15.7973274814304	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGAGCCATGAGTTCTGC	NA	False	NA	-70	True	NA	NA	NA	87271882	87268028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_87268219_87269818_87269953_87270931_87271084_87271812
ENSMUSG00000072944.12_138907554_138963346_1	chrX	-	1744	8	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	199.257704124737	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCTGAACTGGGTTT	NA	False	NA	-9	True	AATAAA	-16	NA	138963346	138907553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
ENSMUSG00000072944.12_138907554_138963346_2	chrX	-	1879	9	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	238	junction_8	106.849119673491	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCTGAACTGGGTTT	NA	False	NA	-9	True	AATAAA	-16	NA	138963346	138907553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
ENSMUSG00000072944.12_138907554_138963346_3	chrX	-	1927	10	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	217.114920926428	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCTGAACTGGGTTT	NA	False	NA	-9	True	AATAAA	-16	NA	138963346	138907553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138961523_138961572_138963307
ENSMUSG00000072944.12_138907554_138963461_1	chrX	-	1994	9	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	238	junction_8	106.849119673491	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCTGAACTGGGTTT	NA	False	NA	-9	True	AATAAA	-16	NA	138963461	138907553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
ENSMUSG00000072944.12_138908422_138963346_1	chrX	-	1011	9	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-17	-868	combination_of_known_junctions	FALSE	canonical	3	238	junction_8	106.849119673491	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTGCATGCATTTAT	NA	False	NA	NA	False	ATTAAA	-42	NA	138963346	138908421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
ENSMUSG00000072946.13_84332148_84360879_1	chr12	+	1298	10	NNC	ENSMUSG00000072946.13	novel	3168	10	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	103.238785897454	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGATTCTAGTGTGAT	NA	False	NA	31	True	TTTAAA	-22	NA	84332147	84360879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344982_84349014_84349182_84352699_84352910_84354549_84354672_84355120_84355207_84357692_84357733_84360710
ENSMUSG00000072955.15_135856014_135877618_1	chrX	-	539	4	FSM	ENSMUSG00000072955.15	ENSMUST00000127404.8	816	4	0	277	0	-277	multi-exon	FALSE	canonical	3	70	junction_2	61.5918465022405	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTAACTTCCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	135877618	135856013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135856232_135857483_135857589_135876146_135876252_135877507
ENSMUSG00000072964.15_134786602_134791619_1	chrX	+	2602	5	FSM	ENSMUSG00000072964.15	ENSMUST00000180025.8	2812	5	2	208	0	6	multi-exon	FALSE	canonical	0	0	junction_1	89.3168517134365	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTGATTTCTATCTTA	NA	False	NA	NA	False	AATAAA	-24	NA	134786601	134791619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_134786837_134787593_134787676_134788009_134788067_134789120_134789229_134789499
ENSMUSG00000072966.12_134739805_134744011_2	chrX	+	2290	7	NNC	ENSMUSG00000072966.12	novel	3736	7	NA	NA	0	-1464	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.6669207311169	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGTGTACACAGCTAAG	NA	False	NA	NA	False	NA	NA	NA	134739804	134744011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_134740016_134740531_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
ENSMUSG00000072980.4_119439993_119448950_1	chr2	-	1519	7	NNC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	249.409970396801	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAGAATT	7480	False	NA	NA	False	NA	NA	NA	119448950	119439992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_119440234_119440255_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
ENSMUSG00000072980.4_119439993_119448950_2	chr2	-	1418	5	NIC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_3	272.52247613729	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAGAATT	7480	False	NA	NA	False	NA	NA	NA	119448950	119439992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_119440846_119442232_119442337_119443492_119443575_119448334_119448402_119448638
ENSMUSG00000073000.4_76491271_76497289_1	chr12	+	2710	2	FSM	ENSMUSG00000073000.4	ENSMUST00000219367.2	855	2	0	-1855	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGCCTCAGTCGTGGT	NA	False	NA	10	True	NA	NA	NA	76491270	76497289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_76491440_76494748
ENSMUSG00000073125.11_72235813_72245868_1	chrX	+	921	9	FSM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	-15	658	0	-658	multi-exon	FALSE	canonical	3	836	junction_5	296.174779479955	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGTGCAAATATGTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	72235812	72245868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
ENSMUSG00000073125.11_72235813_72245868_2	chrX	+	1736	8	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	0	-658	intron_retention	FALSE	canonical	3	856	junction_4	287.08421576042	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGTGCAAATATGTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	72235812	72245868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72243351_72243451_72245455_72245552_72245645
ENSMUSG00000073125.11_72235813_72246017_1	chrX	+	1070	9	FSM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	-15	509	0	-509	multi-exon	FALSE	canonical	3	836	junction_5	296.174779479955	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGTGGGCTATTGTTG	NA	False	NA	NA	False	NA	NA	NA	72235812	72246017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
ENSMUSG00000073125.11_72235813_72246017_2	chrX	+	1885	8	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	0	-509	intron_retention	FALSE	canonical	3	856	junction_4	287.08421576042	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGTGGGCTATTGTTG	NA	False	NA	NA	False	NA	NA	NA	72235812	72246017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72243351_72243451_72245455_72245552_72245645
ENSMUSG00000073125.11_72235813_72246536_1	chrX	+	2404	8	NIC	ENSMUSG00000073125.11	novel	3780	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	856	junction_4	287.08421576042	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235812	72246536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72243351_72243451_72245455_72245552_72245645
ENSMUSG00000073125.11_72235813_72246536_2	chrX	+	1582	9	NNC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	459.943678617285	2155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235812	72246536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_72235856_72237775_72237913_72238612_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
ENSMUSG00000073131.13_70860396_70864664_1	chrX	+	515	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	32	3648	0	74	multi-exon	FALSE	canonical	3	286	junction_1	56.5	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCTTAAAGAGTCAGTC	NA	False	NA	27	True	AATAAA	-39	NA	70860395	70864664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_70860547_70863673_70863784_70864410
ENSMUSG00000073131.13_70860396_70866035_1	chrX	+	1886	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	32	2277	0	1445	multi-exon	FALSE	canonical	3	286	junction_1	56.5	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCTATTATTGATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	70860395	70866035	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_70860547_70863673_70863784_70864410
ENSMUSG00000073147.4_23627402_23638323_1	chr5	-	615	2	NIC	ENSMUSG00000073147.4	novel	719	3	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGACATTTTATTTGGAAT	NA	False	NA	NA	False	NA	NA	NA	23638323	23627401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_23627901_23638207
ENSMUSG00000073155.13_35229651_35238465_1	chr6	+	493	3	FSM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	62	1966	0	-107	multi-exon	FALSE	canonical	3	978	junction_2	33.5	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGGATTTGGATAGCTG	NA	False	NA	-94	True	AAGAAA	-1	NA	35229650	35238465	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_35229718_35237344_35237399_35238093
ENSMUSG00000073155.13_35229651_35238574_1	chr6	+	602	3	FSM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	62	1857	0	2	multi-exon	FALSE	canonical	3	978	junction_2	33.5	4400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGGTGAATTAATCCA	NA	False	NA	15	True	ATTAAA	-19	NA	35229650	35238574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_35229718_35237344_35237399_35238093
ENSMUSG00000073155.13_35229651_35238957_1	chr6	+	985	3	FSM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	62	1474	0	0	multi-exon	FALSE	canonical	3	978	junction_2	33.5	4686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTGGTAAAGTGAGT	NA	False	NA	NA	False	NA	NA	NA	35229650	35238957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_35229718_35237344_35237399_35238093
ENSMUSG00000073164.12_23009678_23051424_1	chr12	-	873	4	NNC	ENSMUSG00000073164.12	novel	3370	5	NA	NA	8575	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.56846672960488	769	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCCAGCTGAGCTCATC	NA	False	NA	-7	True	NA	NA	NA	23051424	23009677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_23010256_23042788_23042850_23043051_23043179_23051317
ENSMUSG00000073380.3_56601111_56604975_1	chr17	-	703	2	ISM	ENSMUSG00000073380.3	ENSMUST00000097303.3	1056	3	2311	0	2291	0	3prime_fragment	FALSE	canonical	3	9	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGAGTTGTCTGCTGGGC	5021	False	NA	NA	False	ATTAAA	-20	NA	56604975	56601110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr17_-_56601665_56604826
ENSMUSG00000073406.11_36391007_36395140_1	chr17	-	935	5	FSM	ENSMUSG00000073406.11	ENSMUST00000185167.8	836	5	-25	-74	-25	0	multi-exon	FALSE	canonical	3	9	junction_4	210.516626421763	1364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTATGTTTCCTGCAT	NA	False	NA	-5	True	AATAAA	-22	NA	36395140	36391006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394832_36395051
ENSMUSG00000073411.13_35482072_35486332_2	chr17	+	1593	8	FSM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	366	143	0	3	multi-exon	FALSE	canonical	3	37	junction_3	6.54341856605645	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAAGTGACCTTGATTG	2085	False	NA	NA	False	NA	NA	NA	35482071	35486332	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
ENSMUSG00000073411.13_35482072_35486475_2	chr17	+	1736	8	FSM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	366	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	6.54341856605645	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCACTATGCTGTGT	2085	False	NA	26	True	AATAAA	-25	NA	35482071	35486475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
ENSMUSG00000073413.10_35295878_35297780_1	chr17	-	1177	3	Genic_Genomic	ENSMUSG00000073413.10	novel	690	3	NA	NA	-739	-2689	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTGTGTCTGCCGCCTT	NA	False	NA	NA	False	NA	NA	NA	35297780	35295877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_-_35296183_35296812_35296939_35297034
ENSMUSG00000073413.10_35295878_35297780_2	chr17	-	1033	4	Genic_Genomic	ENSMUSG00000073413.10	novel	690	3	NA	NA	-739	-2689	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTGTGTCTGCCGCCTT	NA	False	NA	NA	False	NA	NA	NA	35297780	35295877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_-_35295967_35296110_35296183_35296812_35296939_35297034
ENSMUSG00000073423.11_33848064_33850690_1	chr17	+	1616	6	NIC	ENSMUSG00000073423.11	novel	1211	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	63	junction_1	143.215920902671	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTACCTATGCCTTC	4917	False	NA	29	True	AATACA	-19	NA	33848063	33850690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_33848673_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ENSMUSG00000073433.12_26418157_26426760_1	chr17	-	989	6	FSM	ENSMUSG00000073433.12	ENSMUST00000176847.8	736	6	0	-253	0	0	multi-exon	TRUE	canonical	2	4	junction_5	35.4434761274907	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGCTGCTTCTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	26426760	26418156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26418504_26418586_26418651_26418725_26418803_26418988_26419073_26419164_26419345_26426523
ENSMUSG00000073435.11_25115479_25116476_1	chr17	+	654	5	NNC	ENSMUSG00000073435.11	novel	516	5	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	82.368076340291	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCGCTGGTGAAGTTTC	NA	False	NA	16	True	AATAAA	-15	NA	25115478	25116476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_25115534_25115637_25115733_25115825_25115928_25116001_25116115_25116187
ENSMUSG00000073435.11_25115479_25116476_2	chr17	+	683	5	FSM	ENSMUSG00000073435.11	ENSMUST00000150500.8	516	5	0	-167	0	18	multi-exon	FALSE	canonical	2	2	junction_1	84.0922112921286	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCGCTGGTGAAGTTTC	NA	False	NA	16	True	AATAAA	-15	NA	25115478	25116476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25115534_25115608_25115733_25115825_25115928_25116001_25116115_25116187
ENSMUSG00000073435.11_25115479_25116476_3	chr17	+	559	4	NIC	ENSMUSG00000073435.11	novel	516	5	NA	NA	0	18	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	88.6002257333467	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCGCTGGTGAAGTTTC	NA	False	NA	16	True	AATAAA	-15	NA	25115478	25116476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_25115534_25115825_25115928_25116001_25116115_25116187
ENSMUSG00000073435.11_25115479_25116476_4	chr17	+	653	5	NNC	ENSMUSG00000073435.11	novel	715	5	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	80.9706737035082	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCGCTGGTGAAGTTTC	NA	False	NA	16	True	AATAAA	-15	NA	25115478	25116476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_25115534_25115601_25115733_25115825_25115928_25116001_25116078_25116187
ENSMUSG00000073436.12_25105676_25111123_1	chr17	-	1529	7	NNC	ENSMUSG00000073436.12	novel	5226	7	NA	NA	2036	1784	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCCCGCCCCCGCCCTGC	4802	False	NA	NA	False	NA	NA	NA	25111123	25105675	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_25105735_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25110037_25110111_25110333
ENSMUSG00000073436.12_25105733_25111112_1	chr17	-	2010	7	NNC	ENSMUSG00000073436.12	novel	5226	7	NA	NA	2047	1727	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCCAAAAAGCTCCCCCG	4813	False	NA	NA	False	NA	NA	NA	25111112	25105732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_25106231_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ENSMUSG00000073460.6_13107616_13128833_1	chr17	-	1808	19	FSM	ENSMUSG00000073460.6	ENSMUST00000163394.3	2092	19	284	0	0	0	multi-exon	TRUE	canonical	3	109	junction_10	13.5984067694222	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTACATGGCCAGTGC	2974	False	NA	-8	True	GATAAA	-20	NA	13128833	13107615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
ENSMUSG00000073481.10_184545879_184556816_1	chr1	-	605	5	NNC	ENSMUSG00000073481.10	novel	572	5	NA	NA	-1584	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	410.378179244462	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTACACCCGCTATTACGT	NA	False	NA	-14	True	AATAAA	-27	NA	184556816	184545878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184556694
ENSMUSG00000073481.10_184545889_184551489_1	chr1	-	284	2	FSM	ENSMUSG00000073481.10	ENSMUST00000160318.2	433	2	151	-2	151	0	multi-exon	FALSE	canonical	3	891	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTGAATGCTACACCC	NA	False	NA	-24	True	AATAAA	-17	NA	184551489	184545888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_184546081_184551397
ENSMUSG00000073481.10_184545889_184554973_1	chr1	-	515	5	NNC	ENSMUSG00000073481.10	novel	633	5	NA	NA	259	0	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_4	396.13657682673	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTGAATGCTACACCC	NA	False	NA	-24	True	AATAAA	-17	NA	184554973	184545888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184554931
ENSMUSG00000073538.11_153281993_153283538_1	chr1	-	546	2	FSM	ENSMUSG00000073538.11	ENSMUST00000186785.7	1964	2	-2	1420	-2	0	multi-exon	FALSE	canonical	3	87	junction_1	0	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGGGGTGTGGCCTGC	NA	False	NA	NA	False	NA	NA	NA	153283538	153281992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_153282348_153283347
ENSMUSG00000073568.3_47054882_47062250_1	chr18	+	630	5	NNC	ENSMUSG00000073568.3	novel	2257	5	NA	NA	0	-5039	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	119.357393989648	15807	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTTTAAAACAGGGTT	NA	False	NA	NA	False	NA	NA	NA	47054881	47062250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_47054960_47059048_47059157_47059378_47059483_47061585_47061726_47062050
ENSMUSG00000073616.11_92564867_92569670_1	chr1	-	466	4	NNC	ENSMUSG00000073616.11	novel	649	3	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	277.022662530623	2868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGCTTTTAGATGCA	NA	False	NA	-19	True	AATAAA	-30	NA	92569670	92564866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_92565126_92567408_92567482_92569328_92569394_92569601
ENSMUSG00000073616.11_92564867_92569670_2	chr1	-	328	2	NIC	ENSMUSG00000073616.11	novel	438	3	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	0	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGCTTTTAGATGCA	NA	False	NA	-19	True	AATAAA	-30	NA	92569670	92564866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_92565126_92569601
ENSMUSG00000073639.7_6765203_6789741_1	chr18	+	1769	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	58	4688	0	501	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTTTCTAACTCCTTG	7	True	NA	19	True	AATAAA	-15	NA	6765202	6789741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ENSMUSG00000073639.7_6765203_6789951_1	chr18	+	1979	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	58	4478	0	711	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	1569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTTACTGGGTTTA	7	True	NA	11	True	GATAAA	-21	NA	6765202	6789951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ENSMUSG00000073639.7_6765203_6790183_1	chr18	+	2211	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	58	4246	0	943	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	2525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTGTCTTGTCTGTC	7	True	NA	19	True	ATTAAA	-16	NA	6765202	6790183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ENSMUSG00000073643.12_79682367_79739438_1	chr1	-	2115	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	48	2388	0	707	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTATATGGTAGCAAGTT	NA	False	NA	NA	False	NA	NA	NA	79739438	79682366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ENSMUSG00000073643.12_79682558_79739438_1	chr1	-	1924	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	48	2579	0	516	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTGGACAAAGCTTTC	NA	False	NA	NA	False	NA	NA	NA	79739438	79682557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ENSMUSG00000073643.12_79683074_79739438_1	chr1	-	1408	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	48	3095	0	0	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTTTGGGGGTATTTG	NA	False	NA	-31	True	TATAAA	-1	NA	79739438	79683073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ENSMUSG00000073643.12_79753833_79759162_1	chr1	-	1321	4	NNC	ENSMUSG00000073643.12	novel	914	7	NA	NA	-5302	-42263	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGCGGAAGGAAGACAG	3785	False	NA	NA	False	AATACA	-29	NA	79759162	79753832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_79754029_79755579_79756044_79757204_79757384_79758680
ENSMUSG00000073643.12_79753833_79759162_2	chr1	-	1162	4	NNC	ENSMUSG00000073643.12	novel	914	7	NA	NA	-5302	-42263	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGCGGAAGGAAGACAG	3785	False	NA	NA	False	AATACA	-29	NA	79759162	79753832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_79754029_79755574_79755880_79757204_79757384_79758680
ENSMUSG00000073652.11_71691996_71696406_1	chr1	+	390	2	NNC	ENSMUSG00000073652.11	novel	826	3	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCTGTTGGCAATTT	NA	False	NA	NA	False	TTTAAA	-6	NA	71691995	71696406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_71692183_71696203
ENSMUSG00000073676.5_55116994_55127402_1	chr1	+	2276	12	NIC	ENSMUSG00000073676.5	novel	774	4	NA	NA	-10297	-1672	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	15248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGCGCGCGTCGGCGTGGC	NA	False	NA	NA	False	NA	NA	NA	55116993	55127402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127303
ENSMUSG00000073676.5_55127473_55130466_1	chr1	+	593	4	NNC	ENSMUSG00000073676.5	novel	774	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3940.03979111323	55458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACAGTCTTTGGTAATT	NA	False	NA	13	True	AATAAA	-14	NA	55127472	55130466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_55127572_55128209_55128383_55129878_55129962_55130228
ENSMUSG00000073676.5_55127473_55130466_2	chr1	+	600	4	NNC	ENSMUSG00000073676.5	novel	774	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3940.03979111323	58376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACAGTCTTTGGTAATT	NA	False	NA	13	True	AATAAA	-14	NA	55127472	55130466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_55127572_55128209_55128383_55129871_55129962_55130228
ENSMUSG00000073676.5_55127473_55130466_4	chr1	+	587	4	NNC	ENSMUSG00000073676.5	novel	774	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3777.35360036921	42010	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACAGTCTTTGGTAATT	NA	False	NA	13	True	AATAAA	-14	NA	55127472	55130466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_55127572_55128209_55128375_55129871_55129962_55130233
ENSMUSG00000073676.5_55127473_55130466_5	chr1	+	657	4	NNC	ENSMUSG00000073676.5	novel	774	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	70	junction_2	3907.0816332512	12379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACAGTCTTTGGTAATT	NA	False	NA	13	True	AATAAA	-14	NA	55127472	55130466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_55127572_55128209_55128440_55129871_55129962_55130228
ENSMUSG00000073676.5_55127473_55130466_6	chr1	+	577	4	NNC	ENSMUSG00000073676.5	novel	774	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3940.03979111323	9368	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACAGTCTTTGGTAATT	NA	False	NA	13	True	AATAAA	-14	NA	55127472	55130466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_55127572_55128209_55128375_55129886_55129962_55130228
ENSMUSG00000073678.5_54529380_54596841_1	chr1	-	2439	24	ISM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	0	17227	0	-17227	5prime_fragment	TRUE	canonical	3	24	junction_15	5.49101345231091	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTTTGTTTCTAAAC	NA	False	NA	NA	False	TTTAAA	-16	NA	54596841	54529379	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr1_-_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ENSMUSG00000073684.14_155334446_155341144_1	chr4	+	1014	4	FSM	ENSMUSG00000073684.14	ENSMUST00000105627.8	710	4	0	-304	0	0	multi-exon	FALSE	canonical	2	17	junction_1	91.7617688485909	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTCCTTCATAGCAA	NA	False	NA	8	True	NA	NA	NA	155334445	155341144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155334520_155335001_155335108_155335212_155335494_155340591
ENSMUSG00000073684.14_155334562_155341144_1	chr4	+	1380	3	FSM	ENSMUSG00000073684.14	ENSMUST00000097747.9	1479	3	102	-3	102	0	multi-exon	FALSE	canonical	3	207	junction_2	4.5	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTCCTTCATAGCAA	NA	False	NA	8	True	NA	NA	NA	155334561	155341144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155335108_155335212_155335494_155340591
ENSMUSG00000073684.14_155334789_155341144_1	chr4	+	1153	3	FSM	ENSMUSG00000073684.14	ENSMUST00000097747.9	1479	3	329	-3	0	0	multi-exon	FALSE	canonical	3	207	junction_2	4.5	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTCCTTCATAGCAA	NA	False	NA	8	True	NA	NA	NA	155334788	155341144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155335108_155335212_155335494_155340591
ENSMUSG00000073702.12_39407010_39410447_1	chr1	+	417	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	87	545	0	0	multi-exon	FALSE	canonical	3	7651	junction_1	2133.80345568658	71914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTTTGGTTTTCCTT	NA	False	NA	26	True	AATAAA	-15	NA	39407009	39410447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ENSMUSG00000073702.12_39407010_39410447_2	chr1	+	411	5	NNC	ENSMUSG00000073702.12	novel	1049	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4475.90356101425	16576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTTTGGTTTTCCTT	NA	False	NA	26	True	AATAAA	-15	NA	39407009	39410447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_39407016_39407229_39407341_39409104_39409221_39410034_39410148_39410382
ENSMUSG00000073705.11_149212887_149222034_2	chr4	-	826	5	FSM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	52	232	0	110	multi-exon	FALSE	canonical	3	344	junction_3	40.8923892674419	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCTGCTGTGGCTTCA	NA	False	NA	-34	True	AATAAA	-19	NA	149222034	149212886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
ENSMUSG00000073705.11_149212887_149222034_3	chr4	-	807	5	FSM	ENSMUSG00000073705.11	ENSMUST00000177408.2	689	5	-8	-110	0	110	multi-exon	FALSE	canonical	3	47	junction_3	159.066809863026	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCTGCTGTGGCTTCA	NA	False	NA	-34	True	AATAAA	-19	NA	149222034	149212886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216734_149216840_149221932
ENSMUSG00000073725.9_24717820_24802113_1	chr1	+	1928	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	109	2416	0	639	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCCTTTGTTGCTTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	24717819	24802113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073731.13_141341544_141345344_1	chr4	+	1466	6	NIC	ENSMUSG00000073731.13	novel	880	3	NA	NA	-121	2429	intron_retention	FALSE	non_canonical	0	0	junction_1	0	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCAATGATATCACTGG	NA	False	NA	NA	False	NA	NA	NA	141341543	141345344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_141342018_141342255_141342447_141343514_141343933_141344605_141344781_141344950_141345024_141345209
ENSMUSG00000073792.12_99603913_99650559_1	chr4	+	1930	15	FSM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	11	1138	0	11	multi-exon	FALSE	non_canonical	0	0	junction_7	55.2805922322746	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTCGTAGTAGCTCATC	NA	False	NA	NA	False	AAAACA	-19	NA	99603912	99650559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ENSMUSG00000073792.12_99603913_99650712_1	chr4	+	2083	15	FSM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	11	985	0	164	multi-exon	FALSE	non_canonical	0	0	junction_7	55.2805922322746	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAATAATGGAATGCAT	NA	False	NA	NA	False	NA	NA	NA	99603912	99650712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ENSMUSG00000073792.12_99603913_99651697_1	chr4	+	2882	14	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	57.0281774016273	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGCGTGTATTTCTT	NA	False	NA	18	True	ATTAAA	-18	NA	99603912	99651697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ENSMUSG00000073987.5_20042052_20066109_1	chr4	+	1324	9	FSM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	0	641	0	-641	multi-exon	FALSE	canonical	3	51	junction_6	14.9080515158756	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTCTGTGATTATTG	-25	True	NA	NA	False	AATACA	-15	NA	20042051	20066109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_20042283_20046202_20046315_20049791_20049843_20052663_20052749_20054063_20054203_20057936_20058044_20058138_20058230_20063998_20064137_20065739
ENSMUSG00000073988.14_20008317_20030470_1	chr4	+	2552	5	FSM	ENSMUSG00000073988.14	ENSMUST00000121491.8	2862	5	310	0	-40	0	multi-exon	FALSE	canonical	3	35	junction_1	15.2212844398888	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGTTTATATTTTTC	327	False	NA	21	True	AATAAA	-17	NA	20008316	20030470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_20008347_20014630_20014785_20021191_20021386_20023784_20023896_20028407
ENSMUSG00000074039.11_114197371_114198134_1	chr9	+	370	3	NNC	ENSMUSG00000074039.11	novel	1285	4	NA	NA	0	-2098	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	7	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATGAAATCTAGATTGAC	NA	False	NA	NA	False	ATTAAA	-22	NA	114197370	114198134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_114197553_114197857_114197968_114198056
ENSMUSG00000074093.5_51646919_51655599_1	chr7	-	2886	4	FSM	ENSMUSG00000074093.5	ENSMUST00000098414.5	3053	4	167	0	-3	0	multi-exon	FALSE	canonical	3	84	junction_2	8.05536398239638	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGCAAGAGTTAGATGCA	NA	False	NA	-19	True	AATAAA	-17	NA	51655599	51646918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_51649526_51653093_51653208_51653682_51653734_51655485
ENSMUSG00000074093.5_51649360_51655599_1	chr7	-	445	4	FSM	ENSMUSG00000074093.5	ENSMUST00000098414.5	3053	4	167	2441	-3	0	multi-exon	FALSE	canonical	3	84	junction_2	8.05536398239638	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAATATTGGTAATATT	NA	False	NA	NA	False	AATATA	-9	NA	51655599	51649359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_51649526_51653093_51653208_51653682_51653734_51655485
ENSMUSG00000074129.15_44775347_44778160_1	chr7	-	651	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5965.14237474852	139156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44778160	44775346	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_44775457_44775538_44775662_44775901_44775956_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ENSMUSG00000074129.15_44775347_44778160_2	chr7	-	657	8	FSM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	25	365	0	0	multi-exon	FALSE	canonical	3	11064	junction_7	2170.0381732747	160997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44778160	44775346	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ENSMUSG00000074136.10_96466534_96534073_1	chr8	+	4988	34	NIC	ENSMUSG00000074136.10	novel	2803	4	NA	NA	-66838	-2756	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCGCGCGCTCACGTCG	NA	False	NA	NA	False	NA	NA	NA	96466533	96534073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ENSMUSG00000074136.10_96482768_96534073_1	chr8	+	2564	18	NNC	ENSMUSG00000074136.10	novel	2803	4	NA	NA	-50604	-2756	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCGCGCGCTCACGTCG	NA	False	NA	NA	False	NA	NA	NA	96482767	96534073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488065_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ENSMUSG00000074136.10_96482768_96534073_3	chr8	+	2564	18	NNC	ENSMUSG00000074136.10	novel	2803	4	NA	NA	-50604	-2756	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	141	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCGCGCGCTCACGTCG	NA	False	NA	NA	False	NA	NA	NA	96482767	96534073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500065_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ENSMUSG00000074158.10_42258950_42292017_1	chr7	-	5000	4	FSM	ENSMUSG00000074158.10	ENSMUST00000098503.9	1976	4	-46	-2978	-5	0	multi-exon	FALSE	canonical	3	68	junction_3	11.7284080571728	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATAATCTCTTCT	NA	False	NA	-23	True	NA	NA	NA	42292017	42258949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_42263648_42265396_42265458_42265656_42265784_42291903
ENSMUSG00000074170.6_37920097_37927440_1	chr7	-	1562	2	FSM	ENSMUSG00000074170.6	ENSMUST00000098513.6	5263	2	0	3701	0	-3701	multi-exon	FALSE	canonical	3	140	junction_1	0	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTGATTGTTAAGAGT	NA	False	NA	-20	True	NA	NA	NA	37927440	37920096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_37921583_37927364
ENSMUSG00000074182.9_145281987_145282647_1	chr3	+	104	2	ISM	ENSMUSG00000074182.9	ENSMUST00000197940.5	498	5	-42	5744	0	-1638	5prime_fragment	FALSE	canonical	3	509	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGGTTCCCTCAAGAG	NA	False	NA	NA	False	TATAAA	-2	NA	145281986	145282647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_145282049_145282605
ENSMUSG00000074182.9_145281987_145309868_1	chr3	+	1218	11	NNC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	309.730786329031	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGCATGTTACTGCC	NA	False	NA	49	True	ATTAAA	-23	NA	145281986	145309868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_145282174_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298577_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ENSMUSG00000074182.9_145281987_145309868_2	chr3	+	1093	11	NNC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	246.430537880353	2503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGCATGTTACTGCC	NA	False	NA	49	True	ATTAAA	-23	NA	145281986	145309868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298577_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ENSMUSG00000074182.9_145281987_145309868_3	chr3	+	1091	11	NIC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	233.599143834047	2140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGCATGTTACTGCC	NA	False	NA	49	True	ATTAAA	-23	NA	145281986	145309868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_145282040_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ENSMUSG00000074182.9_145281987_145309868_4	chr3	+	1092	11	NNC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	246.560256326927	2436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGCATGTTACTGCC	NA	False	NA	49	True	ATTAAA	-23	NA	145281986	145309868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300362_145300436_145301878_145301957_145306212_145306335_145309689
ENSMUSG00000074182.9_145281987_145309926_1	chr3	+	1150	11	NNC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	0	58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	244.511778857379	2606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAGCTCCTGGTTCACC	NA	False	NA	107	True	TATAAA	-16	NA	145281986	145309926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301886_145301957_145306212_145306335_145309689
ENSMUSG00000074207.11_137983412_137996459_1	chr3	+	1335	9	FSM	ENSMUSG00000074207.11	ENSMUST00000004232.10	1492	9	157	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	3.01817411691241	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTTCTGTGAAACCT	NA	False	NA	NA	False	AATAAA	-28	NA	137983411	137996459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_137983498_137985491_137985594_137986134_137986274_137988196_137988285_137988375_137988596_137992452_137992714_137994509_137994646_137995562_137995702_137996295
ENSMUSG00000074227.13_28955766_28981073_1	chr7	-	864	6	NNC	ENSMUSG00000074227.13	novel	1211	6	NA	NA	262	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	491.498931840141	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	731	False	NA	-16	True	AATAAA	-21	NA	28981073	28955765	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_28956178_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
ENSMUSG00000074227.13_28955766_28981073_2	chr7	-	941	5	NNC	ENSMUSG00000074227.13	novel	1211	6	NA	NA	262	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	445.694612374886	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	731	False	NA	-16	True	AATAAA	-21	NA	28981073	28955765	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_28956263_28957820_28958014_28958823_28958878_28959795_28959856_28980936
ENSMUSG00000074227.13_28955766_28981073_3	chr7	-	949	6	FSM	ENSMUSG00000074227.13	ENSMUST00000108236.5	1211	6	262	0	262	0	multi-exon	FALSE	canonical	0	0	junction_2	398.697679953119	1942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	731	False	NA	-16	True	AATAAA	-21	NA	28981073	28955765	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
ENSMUSG00000074227.13_28955766_28981073_4	chr7	-	1022	7	FSM	ENSMUSG00000074227.13	ENSMUST00000207601.2	1304	7	264	18	262	0	multi-exon	FALSE	canonical	0	0	junction_2	472.77185007382	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	731	False	NA	-16	True	AATAAA	-21	NA	28981073	28955765	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959481_28959555_28959795_28959856_28980936
ENSMUSG00000074240.6_72958179_72961282_1	chr8	-	604	3	ISM	ENSMUSG00000074240.6	ENSMUST00000098630.5	585	5	5381	-43	5381	0	3prime_fragment	FALSE	canonical	3	13	junction_2	0.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGATCTCTGCCTTTTGC	NA	False	NA	NA	False	AATAAA	-18	NA	72961282	72958178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_-_72958275_72959406_72959603_72960970
ENSMUSG00000074247.11_71921855_71927736_2	chr8	+	920	5	NNC	ENSMUSG00000074247.11	novel	1933	5	NA	NA	0	118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	353.760512211298	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCGTCTTTGCTCCGCA	NA	False	NA	18	True	AATAAA	-19	NA	71921854	71927736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_71921970_71924680_71924762_71924838_71924891_71926418_71926486_71927131
ENSMUSG00000074269.11_58489690_58560161_1	chr9	-	1909	8	NIC	ENSMUSG00000074269.11	novel	883	6	NA	NA	6414	70443	intron_retention	FALSE	non_canonical	0	0	junction_1	0	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCGGGGCCGGGGCCGGG	NA	False	NA	NA	False	NA	NA	NA	58560161	58489689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141
ENSMUSG00000074269.11_58489690_58560161_2	chr9	-	1791	8	NIC	ENSMUSG00000074269.11	novel	883	6	NA	NA	6414	70443	intron_retention	FALSE	non_canonical	0	0	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCGGGGCCGGGGCCGGG	NA	False	NA	NA	False	NA	NA	NA	58560161	58489689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58550968_58557779_58557802_58558540_58558616_58559141
ENSMUSG00000074269.11_58560164_58648850_1	chr9	-	865	6	NNC	ENSMUSG00000074269.11	novel	883	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	244.73054570282	1626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTTATCAATGTTTT	9042	False	NA	-8	True	AATAAA	-15	NA	58648850	58560163	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_58560390_58565039_58565127_58567456_58567649_58573110_58573200_58619298_58619389_58648669
ENSMUSG00000074269.11_58560164_58648850_2	chr9	-	831	6	NNC	ENSMUSG00000074269.11	novel	883	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	297.891658157794	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTTATCAATGTTTT	9042	False	NA	-8	True	AATAAA	-15	NA	58648850	58560163	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_58560390_58565039_58565127_58567491_58567655_58573115_58573200_58619298_58619389_58648669
ENSMUSG00000074280.7_57391246_57391906_1	chr9	+	540	2	Genic_Genomic	ENSMUSG00000074280.7	novel	409	1	NA	NA	0	252	multi-exon	FALSE	non_canonical	0	0	junction_1	0	448	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCAGCAATGTTCAATAT	NA	False	NA	NA	False	NA	NA	NA	57391245	57391906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_57391450_57391570
ENSMUSG00000074280.7_57391246_57391906_3	chr9	+	568	2	Genic_Genomic	ENSMUSG00000074280.7	novel	409	1	NA	NA	0	252	multi-exon	FALSE	non_canonical	0	0	junction_1	0	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCAGCAATGTTCAATAT	NA	False	NA	NA	False	NA	NA	NA	57391245	57391906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_57391478_57391570
ENSMUSG00000074284.7_56964184_56979252_1	chr9	-	1132	3	FSM	ENSMUSG00000074284.7	ENSMUST00000128125.2	1241	3	-161	270	-2	-270	multi-exon	FALSE	canonical	1	2	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTATCTCCACTGTGTCCT	NA	False	NA	NA	False	ATTAAA	-18	NA	56979252	56964183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_56964423_56964552_56965086_56978892
ENSMUSG00000074365.14_15630096_15634223_1	chr7	+	2090	3	FSM	ENSMUSG00000074365.14	ENSMUST00000150050.3	2090	3	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	3	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATCTGTGCCTGCTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	15630095	15634223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_15630183_15631328_15631478_15632369
ENSMUSG00000074476.7_21620371_21671578_1	chr9	-	1202	6	NNC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	0	46367	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1064.06755424644	5664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCTGGAGAGATGGTTC	NA	False	NA	NA	False	NA	NA	NA	21671578	21620370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_21620570_21667084_21667592_21668412_21668490_21668585_21668696_21668980_21669126_21671414
ENSMUSG00000074476.7_21667400_21671578_1	chr9	-	681	5	NNC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	944.135186294844	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCGTTCATTGATTTAT	NA	False	NA	-22	True	ATTAAA	-12	NA	21671578	21667399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_21667592_21668412_21668490_21668585_21668696_21668987_21669126_21671414
ENSMUSG00000074476.7_21667400_21671578_2	chr9	-	688	5	NNC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	944.135186294844	2376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCGTTCATTGATTTAT	NA	False	NA	-22	True	ATTAAA	-12	NA	21671578	21667399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_21667592_21668412_21668490_21668585_21668696_21668980_21669126_21671414
ENSMUSG00000074479.4_88483246_88495326_1	chr3	-	971	9	Genic_Genomic	ENSMUSG00000074479.4	novel	730	1	NA	NA	-10880	471	multi-exon	TRUE	non_canonical	0	0	junction_1	0	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTTGGCCTCAGACC	8280	False	NA	NA	False	NA	NA	NA	88495326	88483245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_-_88483288_88483545_88483689_88483806_88483911_88484401_88484504_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ENSMUSG00000074479.4_88483246_88495726_1	chr3	-	1371	9	Genic_Genomic	ENSMUSG00000074479.4	novel	730	1	NA	NA	-11280	471	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTTGGCCTCAGACC	7880	False	NA	NA	False	NA	NA	NA	88495726	88483245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_-_88483288_88483545_88483689_88483806_88483911_88484401_88484504_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ENSMUSG00000074479.4_88483246_88495726_2	chr3	-	1228	8	Genic_Genomic	ENSMUSG00000074479.4	novel	730	1	NA	NA	-11280	471	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12842	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTTGGCCTCAGACC	7880	False	NA	NA	False	NA	NA	NA	88495726	88483245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_-_88483288_88483806_88483911_88484401_88484504_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ENSMUSG00000074479.4_88483246_88495726_4	chr3	-	1489	8	Genic_Genomic	ENSMUSG00000074479.4	novel	730	1	NA	NA	-11280	471	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13064	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTTGGCCTCAGACC	7880	False	NA	NA	False	NA	NA	NA	88495726	88483245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_-_88483288_88483545_88483911_88484401_88484504_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ENSMUSG00000074489.10_88275929_88280050_1	chr3	-	697	4	NNC	ENSMUSG00000074489.10	novel	2051	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	50.4468917663803	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGGGCTGGAGTCTG	7128	False	NA	NA	False	AATAAA	-13	NA	88280050	88275928	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_88276196_88276401_88276491_88276779_88276916_88279845
ENSMUSG00000074513.10_84403400_84489995_1	chr3	-	2953	8	FSM	ENSMUSG00000074513.10	ENSMUST00000098990.10	2799	8	-154	0	-63	0	multi-exon	FALSE	canonical	3	164	junction_6	7.88954358370519	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGCCCTGTCCTTAT	NA	False	NA	-3	True	ATTAAA	-16	NA	84489995	84403399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84455240_84455343_84489720
ENSMUSG00000074521.10_177401081_177547323_1	chr2	+	1182	4	Fusion	ENSMUSG00000078864.11_ENSMUSG00000074521.10	novel	744	6	NA	NA	0	-254	multi-exon	FALSE	canonical	3	23	junction_2	151.098937418133	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTGCAAAGACTTTGA	NA	False	NA	NA	False	NA	NA	NA	177401080	177547323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_+_177401169_177404638_177404694_177546077_177546205_177546411
ENSMUSG00000074527.12_176609188_176619588_1	chr2	-	464	5	FSM	ENSMUSG00000074527.12	ENSMUST00000099007.3	3823	5	14	3345	-1	147	multi-exon	FALSE	canonical	3	18	junction_3	30.886890422961	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	176619588	176609187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_176609305_176610459_176610521_176610725_176610853_176615991_176616047_176619484
ENSMUSG00000074527.12_176610314_176619588_1	chr2	-	465	4	NNC	ENSMUSG00000074527.12	novel	3823	5	NA	NA	-1	-979	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	13.5728487143349	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATGTATGTAATTATTG	NA	False	NA	NA	False	NA	NA	NA	176619588	176610313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_176610521_176610725_176610853_176615991_176616047_176619512
ENSMUSG00000074529.11_177544854_177567454_1	chr2	-	770	2	NIC	ENSMUSG00000074529.11	novel	561	3	NA	NA	-48	279	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	0	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCTAAACTGTTATAAATC	NA	False	NA	NA	False	AATAAA	-45	NA	177567454	177544853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_177545521_177567351
ENSMUSG00000074529.11_177544854_177567454_2	chr2	-	897	3	FSM	ENSMUSG00000074529.11	ENSMUST00000108934.9	561	3	-57	-279	-48	279	multi-exon	FALSE	canonical	3	10	junction_1	2	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCTAAACTGTTATAAATC	NA	False	NA	NA	False	AATAAA	-45	NA	177567454	177544853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_177545521_177563481_177563609_177567351
ENSMUSG00000074529.11_177544854_177567454_3	chr2	-	831	3	NIC	ENSMUSG00000074529.11	novel	561	3	NA	NA	-48	279	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	4	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCTAAACTGTTATAAATC	NA	False	NA	NA	False	AATAAA	-45	NA	177567454	177544853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_177545521_177563227_177563289_177567351
ENSMUSG00000074578.15_166905143_166907782_1	chr2	+	449	5	FSM	ENSMUSG00000074578.15	ENSMUST00000189909.7	738	5	289	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	47.5105251496971	23129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905142	166907782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353_166907401_166907606
ENSMUSG00000074578.15_166905143_166907782_2	chr2	+	442	5	NNC	ENSMUSG00000074578.15	novel	738	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	409.357041590834	22394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905142	166907782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_166905218_166905555_166905648_166907078_166907138_166907360_166907401_166907606
ENSMUSG00000074582.11_166732233_166737096_1	chr2	+	947	4	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	84725	2876	62656	-2876	3prime_fragment	FALSE	canonical	3	194	junction_1	17.0163320241336	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTAAGTGCGCGGTGTTT	NA	False	NA	11	True	AATAAA	-23	NA	166732232	166737096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_166732358_166733686_166733826_166735420_166735539_166736531
ENSMUSG00000074627.12_157121231_157167977_2	chr2	-	2242	17	NNC	ENSMUSG00000074627.12	novel	3460	25	NA	NA	-46508	-15190	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	873	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCACCGGAGCCCGAGCA	NA	False	NA	NA	False	NA	NA	NA	157167977	157121230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137315_157139307_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ENSMUSG00000074627.12_157121231_157167977_3	chr2	-	2235	17	NNC	ENSMUSG00000074627.12	novel	3460	25	NA	NA	-46508	-15190	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	829	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCACCGGAGCCCGAGCA	NA	False	NA	NA	False	NA	NA	NA	157167977	157121230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152127_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ENSMUSG00000074635.4_119623797_119624919_1	chr13	-	865	2	Genic_Genomic	ENSMUSG00000074635.4	novel	1133	1	NA	NA	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTGCCGGGTCTGTCTG	NA	False	NA	NA	False	AGTAAA	-10	NA	119624919	119623796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_-_119624129_119624386
ENSMUSG00000074637.8_34704144_34706610_1	chr3	+	950	2	Genic_Genomic	ENSMUSG00000074637.8	novel	2057	1	NA	NA	-410	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCCTGAGTCTTTCATT	4197	False	NA	19	True	AATAAA	-24	NA	34704143	34706610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_34704323_34705839
ENSMUSG00000074637.8_34705542_34706610_1	chr3	+	1036	2	Genic_Genomic	ENSMUSG00000074637.8	novel	2057	1	NA	NA	988	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCCTGAGTCTTTCATT	5595	False	NA	19	True	AATAAA	-24	NA	34705541	34706610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_34705634_34705666
ENSMUSG00000074653.11_30733058_30754014_1	chr3	-	1770	9	FSM	ENSMUSG00000074653.11	ENSMUST00000126658.8	1586	9	-35	-149	-22	149	multi-exon	FALSE	canonical	3	40	junction_7	9.37333318515884	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGCTCATGATACCTTT	NA	False	NA	-5	True	NA	NA	NA	30754014	30733057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
ENSMUSG00000074656.13_154713338_154734728_1	chr2	-	2343	10	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4169.46393510879	34997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCTCCATTGCTTT	3759	False	NA	-16	True	AATAAA	-24	NA	154734728	154713337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_154714096_154714159_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ENSMUSG00000074656.13_154713338_154734788_1	chr2	-	2403	10	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4169.46393510879	38998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCTCCATTGCTTT	3699	False	NA	-16	True	AATAAA	-24	NA	154734788	154713337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_154714096_154714159_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ENSMUSG00000074656.13_154714274_154734788_1	chr2	-	1531	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	67	944	-37	-936	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	35563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATTCCTGGGCTGTGGC	3699	False	NA	58	True	AATAAA	-37	NA	154734788	154714273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ENSMUSG00000074656.13_154714355_154734728_1	chr2	-	1383	9	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	0	-1017	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4355.96415131025	5498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGAAGTCGATCTGTC	3759	False	NA	-23	True	ATTAAA	-17	NA	154734728	154714354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_154714821_154715468_154715555_154718535_154718593_154719597_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ENSMUSG00000074665.12_153795986_153805773_1	chr2	+	891	6	ISM	ENSMUSG00000074665.12	ENSMUST00000099181.2	1479	13	10143	-1	10143	1	3prime_fragment	FALSE	canonical	2	5	junction_4	2.13541565040626	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGTGTCTCCATGAAG	NA	False	NA	NA	False	NA	NA	NA	153795985	153805773	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_153796354_153799049_153799118_153799638_153799682_153801569_153801634_153803435_153803513_153805502
ENSMUSG00000074698.11_152068796_152121170_1	chr2	+	1567	13	FSM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	37	2602	0	-2602	multi-exon	FALSE	canonical	2	55	junction_1	32.1674222709181	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTCTTTCTTTCTTT	NA	False	NA	7	True	CATAAA	-18	NA	152068795	152121170	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ENSMUSG00000074698.11_152068796_152122359_1	chr2	+	2756	13	FSM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	37	1413	0	-1413	multi-exon	FALSE	canonical	2	55	junction_1	32.1674222709181	2491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTTATACAACCCTCA	NA	False	NA	99	True	NA	NA	NA	152068795	152122359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ENSMUSG00000074731.4_150313305_150327011_1	chr2	-	2340	4	FSM	ENSMUSG00000074731.4	ENSMUST00000109914.2	2734	4	0	394	0	-394	multi-exon	FALSE	canonical	3	25	junction_1	6.12825877028341	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTAGGGGCAGTCATGGT	NA	False	NA	NA	False	AATAAA	-20	NA	150327011	150313304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_150315345_150316415_150316477_150316675_150316803_150326899
ENSMUSG00000074736.11_149672842_149846312_1	chr2	+	2068	4	NIC	ENSMUSG00000074736.11	novel	2050	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	14.7044966667418	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATGATTTACTTCATG	NA	False	NA	NA	False	NA	NA	NA	149672841	149846312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_149672998_149741337_149741896_149772824_149772963_149845096
ENSMUSG00000074768.7_93753404_93774074_1	chr13	-	1874	8	FSM	ENSMUSG00000074768.7	ENSMUST00000099309.6	2490	8	395	221	0	-221	multi-exon	FALSE	canonical	1	3	junction_5	5.15474815790535	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAATTTTTTGTGGTCCAT	NA	False	NA	NA	False	AATAAA	-25	NA	93774074	93753403	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_93754171_93756589_93756819_93757901_93758085_93761321_93761470_93761804_93761997_93763754_93763874_93769743_93769877_93773971
ENSMUSG00000074781.6_95351007_95378296_1	chr10	+	644	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	0	3223	0	99	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGTGATTACATGCAC	NA	False	NA	NA	False	AATAAA	-17	NA	95351006	95378296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
ENSMUSG00000074781.6_95351007_95378869_1	chr10	+	1217	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	0	2650	0	1	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	6343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTTTGTACAGTTTA	NA	False	NA	NA	False	AGTAAA	-19	NA	95351006	95378869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
ENSMUSG00000074781.6_95351007_95378869_2	chr10	+	1212	4	NNC	ENSMUSG00000074781.6	novel	3867	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	987.68044764826	5979	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTTTGTACAGTTTA	NA	False	NA	NA	False	AGTAAA	-19	NA	95351006	95378869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_95351100_95377066_95377314_95377504_95377641_95378133
ENSMUSG00000074781.6_95351007_95379147_1	chr10	+	1495	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	0	2372	0	279	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	6678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTGATCCTTGGTGTCC	NA	False	NA	5	True	AATAAA	-16	NA	95351006	95379147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
ENSMUSG00000074796.11_130526033_130527583_1	chr2	-	1100	5	ISM	ENSMUSG00000074796.11	ENSMUST00000099362.11	3196	21	11856	0	2902	0	3prime_fragment	FALSE	canonical	3	116	junction_4	16.4544826719043	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130527583	130526032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414
ENSMUSG00000074796.11_130526033_130539396_1	chr2	-	3045	20	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_19	27.8455375458768	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539396	130526032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130539278
ENSMUSG00000074797.12_130509746_130523534_2	chr2	+	1161	7	NNC	ENSMUSG00000074797.12	novel	1390	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	191.914622220982	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTGTCTTGAGTTT	5451	False	NA	18	True	AATAAA	-18	NA	130509745	130523534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_130509856_130513320_130513379_130513475_130513541_130513979_130514054_130517529_130517665_130521254_130521332_130522892
ENSMUSG00000074797.12_130509746_130523534_3	chr2	+	1168	8	NNC	ENSMUSG00000074797.12	novel	1390	8	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	170.192208267894	2355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTGTCTTGAGTTT	5451	False	NA	18	True	AATAAA	-18	NA	130509745	130523534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_130509856_130513320_130513379_130513475_130513541_130513985_130514054_130516158_130516191_130517548_130517665_130521254_130521332_130522892
ENSMUSG00000074797.12_130509746_130523534_4	chr2	+	754	3	NNC	ENSMUSG00000074797.12	novel	1390	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	198.5	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTGTCTTGAGTTT	5451	False	NA	18	True	AATAAA	-18	NA	130509745	130523534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_130509856_130513320_130513379_130522948
ENSMUSG00000074797.12_130509746_130523534_5	chr2	+	1174	8	FSM	ENSMUSG00000074797.12	ENSMUST00000103193.5	1390	8	216	0	0	0	multi-exon	FALSE	canonical	3	338	junction_5	87.1842992792643	2513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTGTCTTGAGTTT	5451	False	NA	18	True	AATAAA	-18	NA	130509745	130523534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_130509856_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548_130517665_130521254_130521332_130522892
ENSMUSG00000074797.12_130509746_130523534_6	chr2	+	1184	8	NNC	ENSMUSG00000074797.12	novel	1390	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	176.270084975139	2277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTGTCTTGAGTTT	5451	False	NA	18	True	AATAAA	-18	NA	130509745	130523534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_130509866_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548_130517665_130521254_130521332_130522892
ENSMUSG00000074802.12_89249649_89279816_1	chr10	-	1771	11	FSM	ENSMUSG00000074802.12	ENSMUST00000099374.9	6748	11	13	4964	0	-1328	multi-exon	FALSE	canonical	3	18	junction_8	13.3450365304858	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTAAAGGAGCCATGCAC	NA	False	NA	NA	False	TATAAA	-24	NA	89279816	89249648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270151_89270224_89272364_89272472_89279716
ENSMUSG00000074813.15_128255371_128271313_1	chr2	-	464	3	NNC	ENSMUSG00000074813.15	novel	1413	7	NA	NA	0	-41336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTGTTGTTGTTGTT	NA	False	NA	NA	False	TTTAAA	-21	NA	128271313	128255370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_128255671_128271013_128271092_128271227
ENSMUSG00000074826.11_67048681_67053442_1	chr13	+	529	4	NNC	ENSMUSG00000074826.11	novel	2067	3	NA	NA	-4297	-3788	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3739	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCCTGGATACTTTAGGAA	NA	False	NA	NA	False	NA	NA	NA	67048680	67053442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_67048891_67049465_67049633_67050793_67050860_67053356
ENSMUSG00000074826.11_67048681_67053442_2	chr13	+	522	4	NNC	ENSMUSG00000074826.11	novel	2067	3	NA	NA	-4297	-3788	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1805	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCCTGGATACTTTAGGAA	NA	False	NA	NA	False	NA	NA	NA	67048680	67053442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_67048891_67049465_67049633_67050793_67050853_67053356
ENSMUSG00000074826.11_67048681_67053442_3	chr13	+	523	4	NNC	ENSMUSG00000074826.11	novel	2067	3	NA	NA	-4297	-3788	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1513	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCCTGGATACTTTAGGAA	NA	False	NA	NA	False	NA	NA	NA	67048680	67053442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_67048891_67049465_67049621_67050793_67050866_67053356
ENSMUSG00000074826.11_67048681_67064548_1	chr13	+	538	5	NNC	ENSMUSG00000074826.11	novel	2067	3	NA	NA	-4297	7248	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	16379	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGCTGAAAAGTTCTG	NA	False	NA	NA	False	AATACA	-30	NA	67048680	67064548	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_67048891_67049465_67049633_67050793_67050866_67053356_67053431_67064533
ENSMUSG00000074826.11_67048681_67064548_2	chr13	+	534	5	NNC	ENSMUSG00000074826.11	novel	2067	3	NA	NA	-4297	7248	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	16335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGCTGAAAAGTTCTG	NA	False	NA	NA	False	AATACA	-30	NA	67048680	67064548	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_67048891_67049465_67049633_67050793_67050866_67053356_67053414_67064520
ENSMUSG00000074826.11_67048681_67064548_3	chr13	+	525	5	NNC	ENSMUSG00000074826.11	novel	2067	3	NA	NA	-4297	7248	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	14908	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGCTGAAAAGTTCTG	NA	False	NA	NA	False	AATACA	-30	NA	67048680	67064548	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_67048891_67049465_67049633_67050793_67050866_67053356_67053403_67064518
ENSMUSG00000074826.11_67048681_67064548_5	chr13	+	534	5	NNC	ENSMUSG00000074826.11	novel	2067	3	NA	NA	-4297	7248	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	14316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGCTGAAAAGTTCTG	NA	False	NA	NA	False	AATACA	-30	NA	67048680	67064548	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_67048891_67049465_67049633_67050793_67050866_67053356_67053396_67064502
ENSMUSG00000074829.11_124057589_124075301_1	chr9	-	439	3	ISM	ENSMUSG00000074829.11	ENSMUST00000177714.8	2623	4	25	3155	0	-1116	5prime_fragment	FALSE	non_canonical	0	0	junction_1	3.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTAGTATAGTCTCATAA	NA	False	NA	NA	False	NA	NA	NA	124075301	124057588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_124057789_124057987_124058115_124075189
ENSMUSG00000074830.5_66638558_66828879_1	chr13	-	558	4	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	-7486	179434	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.2830920561225	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTCATCATCTATAGCAG	NA	False	NA	NA	False	NA	NA	NA	66828879	66638557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_66638818_66821007_66821069_66821267_66821395_66828769
ENSMUSG00000074832.12_66518841_66589186_1	chr13	-	543	5	Fusion	ENSMUSG00000074832.12_ENSMUSG00000094499.4	novel	515	5	NA	NA	-7	-19628	multi-exon	FALSE	canonical	0	0	junction_1	77.515724211285	1578	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCAGTGTCTATTGTTC	NA	False	NA	NA	False	NA	NA	NA	66589186	66518840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr13_-_66518940_66519392_66519543_66581478_66581540_66581739_66581867_66589080
ENSMUSG00000074832.12_66574392_66589200_1	chr13	-	544	4	NNC	ENSMUSG00000074832.12	novel	515	5	NA	NA	-21	3559	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	81.8508127971589	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGCCTTGGTCATGAAA	NA	False	NA	-1	True	NA	NA	NA	66589200	66574391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_66574628_66581478_66581540_66581739_66581867_66589080
ENSMUSG00000074832.12_66577779_66589186_1	chr13	-	2806	4	FSM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	-47	-172	-7	172	multi-exon	FALSE	canonical	3	86	junction_1	43.8254111979188	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	0	True	NA	NA	NA	66589186	66577778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_66580291_66581478_66581540_66581739_66581867_66589080
ENSMUSG00000074863.6_62819598_62832759_1	chr13	-	2467	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221999.2	615	4	-27	-1825	0	0	multi-exon	FALSE	canonical	3	52	junction_3	44.0176732183285	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTCCTGGGAAAAAAC	NA	False	NA	1	True	AATAAA	-20	NA	62832759	62819597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62821755_62823062_62823124_62823332_62823469_62832646
ENSMUSG00000074863.6_62820072_62832759_1	chr13	-	1993	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221999.2	615	4	-27	-1351	0	409	multi-exon	FALSE	canonical	3	52	junction_3	44.0176732183285	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGCGTGTACGAGTCA	NA	False	NA	NA	False	NA	NA	NA	62832759	62820071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62821755_62823062_62823124_62823332_62823469_62832646
ENSMUSG00000074863.6_62846833_62860567_1	chr13	-	2512	5	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	0	387	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	123.408620039283	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTGTCTAGGCATGTA	6808	False	NA	0	True	AATAAA	-18	NA	62860567	62846832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_62848433_62848517_62849126_62853514_62853576_62853943_62854071_62860451
ENSMUSG00000074863.6_62849223_62860579_1	chr13	-	399	4	NIC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	-12	-215	combination_of_known_junctions	FALSE	canonical	3	92	junction_1	78.7950929098168	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCTTTATATTTAGACA	6796	False	NA	NA	False	NA	NA	NA	62860579	62849222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_62849306_62853514_62853576_62853943_62854071_62860451
ENSMUSG00000074865.12_62664611_62706413_1	chr13	-	2299	5	NNC	ENSMUSG00000074865.12	novel	2439	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_4	29.9207286007544	853	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62706413	62664610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_62666545_62667985_62668047_62668231_62668359_62670268_62670333_62706300
ENSMUSG00000074865.12_62666376_62706413_3	chr13	-	470	4	FSM	ENSMUSG00000074865.12	ENSMUST00000101547.12	2147	4	-88	1765	0	0	multi-exon	FALSE	canonical	3	36	junction_3	18.9267594221045	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGTACATAAAAGAACACA	NA	False	NA	NA	False	NA	NA	NA	62706413	62666375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62666545_62667985_62668047_62668231_62668359_62706300
ENSMUSG00000074867.5_62277730_62321752_2	chr13	+	2587	8	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	0	519	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	107.8099234386	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGACCAGTCG	NA	False	NA	NA	False	NA	NA	NA	62277729	62321752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_62277843_62317255_62317383_62317567_62317629_62318963_62319241_62319323_62319833_62319916_62320193_62320444_62320638_62320721
ENSMUSG00000074884.13_121279849_121281538_1	chr2	+	520	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	173	2363	0	3	multi-exon	FALSE	canonical	3	5931	junction_1	722	33318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	NA	False	NA	0	True	ATTAAA	-17	NA	121279848	121281538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121279923_121280455_121280565_121281201
ENSMUSG00000074884.13_121279849_121283490_1	chr2	+	2472	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	173	411	0	4	multi-exon	FALSE	canonical	3	5931	junction_1	722	33682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGCATTCTGGGTAGAA	NA	False	NA	7	True	NA	NA	NA	121279848	121283490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121279923_121280455_121280565_121281201
ENSMUSG00000074887.5_42863463_42875121_1	chr7	+	542	4	NNC	ENSMUSG00000074887.5	novel	1428	4	NA	NA	0	-636	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	125.489264702426	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATCATTGCAGGCACAA	9998	False	NA	NA	False	NA	NA	NA	42863462	42875121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_42863572_42872998_42873126_42873324_42873386_42874876
ENSMUSG00000074887.5_42863463_42875455_1	chr7	+	617	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	0	811	0	-302	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTATCTTCGAATGCAT	9998	False	NA	NA	False	NA	NA	NA	42863462	42875455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
ENSMUSG00000074887.5_42863463_42875624_3	chr7	+	786	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	0	642	0	-133	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGTCTCCGAAAACATG	9998	False	NA	NA	False	NA	NA	NA	42863462	42875624	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
ENSMUSG00000074887.5_42863463_42876713_1	chr7	+	1875	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	0	-447	0	447	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGACACTCTTTGTA	9998	False	NA	12	True	AATAAA	-14	NA	42863462	42876713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
ENSMUSG00000074887.5_42863463_42876713_2	chr7	+	1916	5	NNC	ENSMUSG00000074887.5	novel	1492	5	NA	NA	0	447	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	106.302634021928	763	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGACACTCTTTGTA	9998	False	NA	12	True	AATAAA	-14	NA	42863462	42876713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_42863572_42870265_42870307_42872998_42873126_42873324_42873386_42875135
ENSMUSG00000074890.5_120970934_120987159_1	chr2	-	2579	11	Genic_Genomic	ENSMUSG00000074890.5	novel	3056	1	NA	NA	-16025	-2855	multi-exon	FALSE	non_canonical	0	0	junction_1	0	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTATCCACCGCGGCTAT	NA	False	NA	NA	False	NA	NA	NA	120987159	120970933	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ENSMUSG00000074925.5_23664828_23700165_2	chr19	+	3672	7	FSM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	35	8867	0	1789	multi-exon	FALSE	canonical	3	15	junction_4	3.54338193757822	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGTCCTCTAATATACC	NA	False	NA	NA	False	NA	NA	NA	23664827	23700165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421
ENSMUSG00000075000.12_67102468_67121084_1	chr10	-	1893	4	NNC	ENSMUSG00000075000.12	novel	1813	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	73.1619208787376	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTGAGTATGACTTG	NA	False	NA	NA	False	AATAAA	-21	NA	67121084	67102467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_67103946_67105804_67105926_67111348_67111434_67120875
ENSMUSG00000075023.12_93685712_93760857_1	chr2	-	2329	15	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-61355	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_14	11.1785143768512	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCTCCAGGCCTGCTT	NA	False	NA	-6	True	AATAAA	-17	NA	93760857	93685711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93760610
ENSMUSG00000075054.6_18162785_18167913_1	chr13	-	882	4	NIC	ENSMUSG00000113030.2	novel	558	5	NA	NA	-795	-27050	combination_of_known_splicesites	FALSE	canonical	2	19	junction_1	225.274647190195	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCTCTACATTGTATT	NA	False	NA	NA	False	ATTAAA	-16	NA	18167913	18162784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_18163191_18164161_18164368_18166212_18166335_18167765
ENSMUSG00000075054.6_18162785_18167913_2	chr13	-	1853	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	21	6870	0	635	multi-exon	FALSE	canonical	3	467	junction_2	27.5	1761	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCTCTACATTGTATT	NA	False	NA	NA	False	ATTAAA	-16	NA	18167913	18162784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_18164368_18166212_18166335_18167765
ENSMUSG00000075225.16_41414845_41420957_1	chr10	-	758	4	NNC	ENSMUSG00000075225.16	novel	2742	18	NA	NA	7888	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.86744175568088	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATTTCAAAGCTCCT	NA	False	NA	NA	False	AATAAA	-10	NA	41420957	41414844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_41415301_41415416_41415539_41417769_41417898_41420905
ENSMUSG00000075229.12_35892454_35912481_1	chr16	+	665	5	FSM	ENSMUSG00000075229.12	ENSMUST00000164916.9	1073	5	399	9	0	0	multi-exon	FALSE	canonical	3	859	junction_1	27.9284800875379	5639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTACATATTTATTT	NA	False	NA	16	True	ATTAAA	-13	NA	35892453	35912481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_35892508_35903060_35903187_35905386_35905534_35910270_35910331_35912203
ENSMUSG00000075229.12_35892454_35912481_2	chr16	+	539	4	FSM	ENSMUSG00000075229.12	ENSMUST00000163352.9	391	4	4	-152	0	0	multi-exon	FALSE	canonical	3	31	junction_1	405.618320866085	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTACATATTTATTT	NA	False	NA	16	True	ATTAAA	-13	NA	35892453	35912481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_35892508_35905386_35905534_35910270_35910331_35912203
ENSMUSG00000075232.7_40163454_40178053_1	chr10	-	3075	8	FSM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	129	0	0	0	multi-exon	FALSE	canonical	3	315	junction_3	48.542848734549	2785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTTTTCTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-29	NA	40178053	40163453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ENSMUSG00000075232.7_40164770_40178182_1	chr10	-	1888	8	FSM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	0	1316	0	550	multi-exon	FALSE	canonical	3	315	junction_3	48.542848734549	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAGTCTTTGTAAGAAAA	NA	False	NA	2	True	ATTAAA	-16	NA	40178182	40164769	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ENSMUSG00000075415.14_30922498_31031973_1	chr2	-	2531	15	FSM	ENSMUSG00000075415.14	ENSMUST00000100208.9	1859	15	-159	-513	-4	208	multi-exon	FALSE	canonical	3	84	junction_6	25.508001945768	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAAGAGGCCCAGGAT	4815	False	NA	NA	False	NA	NA	NA	31031973	30922497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ENSMUSG00000075467.5_26240307_26242112_1	chr2	-	732	3	FSM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	10	2174	0	-2174	multi-exon	FALSE	canonical	3	313	junction_2	24.5	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCACCGGGCCTGGGCTCCT	NA	False	NA	-23	True	AGTAAA	-16	NA	26242112	26240306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_26240571_26241346_26241487_26241784
ENSMUSG00000075467.5_26240308_26241651_1	chr2	-	568	2	ISM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	471	2175	461	-2175	3prime_fragment	FALSE	canonical	3	362	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCACCGGGCCTGGGCTCC	NA	False	NA	-24	True	AGTAAA	-15	NA	26241651	26240307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_26240571_26241346
ENSMUSG00000075480.3_106048867_106051357_1	chr11	+	1245	5	Genic_Genomic	ENSMUSG00000075480.3	novel	965	1	NA	NA	-2152	-626	multi-exon	FALSE	non_canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGCTCCGCCCCCTTCTT	NA	False	NA	NA	False	NA	NA	NA	106048866	106051357	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106051185
ENSMUSG00000075486.11_101871202_101877884_2	chr14	-	1028	4	NNC	ENSMUSG00000075486.11	novel	1090	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	201.894912158666	1401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATGACGTGTCTTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	101877884	101871201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_101871829_101874389_101874543_101877547_101877736_101877824
ENSMUSG00000075511.10_83241735_83251481_1	chr15	-	2193	3	NIC	ENSMUSG00000075511.10	novel	1260	4	NA	NA	2	0	intron_retention	FALSE	canonical	3	28	junction_1	13	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCCAGCTTAAGTCTCT	247	False	NA	NA	False	AATAAA	-20	NA	83251481	83241734	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_83243152_83249229_83249715_83251190
ENSMUSG00000075511.10_83241960_83251481_1	chr15	-	1968	3	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	2	-199	intron_retention	FALSE	canonical	3	28	junction_1	13	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATCTGGCCCCAGCATCC	247	False	NA	NA	False	NA	NA	NA	83251481	83241959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_83243152_83249229_83249715_83251190
ENSMUSG00000075528.14_101297665_101308232_1	chr11	-	1307	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	209	0	0	0	multi-exon	FALSE	canonical	3	448	junction_11	68.1448384565145	2345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTATACTGCCATT	NA	False	NA	-21	True	AGTAAA	-16	NA	101308232	101297664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
ENSMUSG00000075555.13_79093511_79094515_1	chr15	+	290	2	NNC	ENSMUSG00000075555.13	novel	905	4	NA	NA	0	-5853	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTGTTTTCCATTCG	3892	False	NA	NA	False	AATAAA	-26	NA	79093510	79094515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_79093676_79094390
ENSMUSG00000075592.11_56091648_56108194_1	chr14	+	3338	8	FSM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	174	3999	155	-3554	multi-exon	FALSE	canonical	3	80	junction_1	7.49965985623239	342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCTTCTACCTGGAAGT	NA	False	NA	NA	False	NA	NA	NA	56091647	56108194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_56091884_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
ENSMUSG00000075700.11_58484119_58498424_1	chr3	+	965	6	FSM	ENSMUSG00000075700.11	ENSMUST00000107924.3	3157	6	62	2130	0	-2130	multi-exon	FALSE	canonical	3	92	junction_4	12.1061967603372	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGTTAAGTCGGTTG	NA	False	NA	NA	False	NA	NA	NA	58484118	58498424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_58484295_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115
ENSMUSG00000075700.11_58484119_58500556_1	chr3	+	3069	7	NNC	ENSMUSG00000075700.11	novel	3157	6	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	3	55	junction_6	24.8758026112838	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCTTTGTGAAAATGAT	NA	False	NA	17	True	AATAAA	-20	NA	58484118	58500556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_58484295_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115_58499681_58499708
ENSMUSG00000075702.11_3464867_3467351_1	chr11	+	705	5	NNC	ENSMUSG00000075702.11	novel	707	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.8876885313182	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGAGTCTCTTCTTATTT	NA	False	NA	22	True	ACTAAA	-14	NA	3464866	3467351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_3465074_3466260_3466301_3466491_3466521_3466841_3466921_3467001
ENSMUSG00000075703.17_30437645_30472246_1	chr5	+	1558	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	66	5179	0	1	multi-exon	FALSE	canonical	3	44	junction_3	10.5725010181025	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGAGTCCATGGCGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	30437644	30472246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
ENSMUSG00000075703.17_30437645_30473972_1	chr5	+	3284	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	66	3453	0	1	multi-exon	FALSE	canonical	3	44	junction_3	10.5725010181025	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTTGTCACTGTTGAA	NA	False	NA	4	True	AGTAAA	-15	NA	30437644	30473972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
ENSMUSG00000075705.14_24955616_24961746_1	chr17	+	878	4	NNC	ENSMUSG00000075705.14	novel	886	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	79.934695568042	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTTTCCGTGTTTGTTGT	NA	False	NA	13	True	AATAAA	-13	NA	24955615	24961746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_24955737_24958472_24958622_24959053_24959199_24961283
ENSMUSG00000075706.12_79889492_79892273_1	chr10	+	789	7	FSM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	170	0	170	0	multi-exon	FALSE	canonical	3	7423	junction_5	743.006878987148	34199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	825	False	NA	4	True	AATAAA	-14	NA	79889491	79892273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ENSMUSG00000075706.12_79889492_79892273_2	chr10	+	782	7	NNC	ENSMUSG00000075706.12	novel	959	7	NA	NA	170	0	at_least_one_novel_splicesite	TRUE	canonical	3	111	junction_3	3127.64293571586	32638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	825	False	NA	4	True	AATAAA	-14	NA	79889491	79892273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_79889550_79890347_79890443_79890533_79890679_79890808_79890954_79891756_79891782_79891873_79891934_79892019
ENSMUSG00000076432.14_21440072_21467589_1	chr12	-	2148	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	49	0	0	0	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	11149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGGCTGGTATTAGAAT	NA	False	NA	-12	True	AATAAA	-18	NA	21467589	21440071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ENSMUSG00000076432.14_21440330_21467589_1	chr12	-	1890	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	49	258	0	0	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	10811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATGGCTTTGTAACA	NA	False	NA	NA	False	AATAAA	-20	NA	21467589	21440329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ENSMUSG00000076432.14_21440677_21467589_1	chr12	-	1543	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	49	605	0	-344	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	6443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCGTAGCTCTGGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	21467589	21440676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ENSMUSG00000076435.4_94449010_94492634_1	chr11	-	2009	16	FSM	ENSMUSG00000076435.4	ENSMUST00000103164.4	3154	16	63	1082	-39	-1082	multi-exon	FALSE	canonical	3	47	junction_6	8.37615663654877	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTCCTCCCACACAAAG	7348	False	NA	NA	False	AAAAAG	-21	NA	94492634	94449009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_94449184_94449465_94449535_94449690_94449802_94450288_94450431_94452065_94452218_94453636_94453745_94460135_94460213_94460766_94460859_94461128_94461287_94461439_94461536_94462096_94462263_94462387_94462507_94463051_94463106_94463347_94463477_94463858_94464055_94492468
ENSMUSG00000076437.12_84499565_84501041_1	chr2	-	760	3	ISM	ENSMUSG00000076437.12	ENSMUST00000117299.10	747	4	73	6	0	0	intron_retention	FALSE	canonical	3	1785	junction_1	215.5	14048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAGCAAGTTTAAATTT	369	False	NA	-14	True	AATAAA	-19	NA	84501041	84499564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_84499742_84500330_84500461_84500588
ENSMUSG00000076441.10_31360219_31410684_1	chr2	+	1564	15	NIC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	195	junction_12	721.33651817233	7087	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCTGCGTGTGTGCC	NA	False	NA	27	True	ATTAAA	-22	NA	31360218	31410684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31404690_31404848_31408737_31408804_31410383
ENSMUSG00000076749.3_19382057_19401194_1	chr13	+	1185	4	NNC	ENSMUSG00000076749.3	novel	924	3	NA	NA	-16216	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1.69967317119759	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTATTTTTGTCAGTC	NA	False	NA	NA	False	AATATA	-15	NA	19382056	19401194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_19382318_19398272_19398603_19400033_19400079_19400645
ENSMUSG00000077450.14_33965575_33979305_1	chr17	-	1326	4	NNC	ENSMUSG00000077450.14	novel	6109	5	NA	NA	-25	149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	288.327360246416	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACCACTCAGCTTCTGTC	NA	False	NA	-10	True	ACTAAA	-27	NA	33979305	33965574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_33966456_33967894_33968035_33968755_33968952_33979196
ENSMUSG00000077450.14_33965575_33979305_2	chr17	-	1793	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	199	4117	-25	149	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	1929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACCACTCAGCTTCTGTC	NA	False	NA	-10	True	ACTAAA	-27	NA	33979305	33965574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
ENSMUSG00000077450.14_33965575_33979305_3	chr17	-	1788	5	FSM	ENSMUSG00000077450.14	ENSMUST00000173987.2	924	5	-51	-813	-25	149	multi-exon	FALSE	canonical	0	0	junction_2	258.561767282017	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACCACTCAGCTTCTGTC	NA	False	NA	-10	True	ACTAAA	-27	NA	33979305	33965574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33966788_33967483_33967560_33967840_33968035_33968755_33968952_33979196
ENSMUSG00000077450.14_33966032_33979305_1	chr17	-	1336	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	199	4574	-25	-225	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTGAGCTGATACCCG	NA	False	NA	NA	False	NA	NA	NA	33979305	33966031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
ENSMUSG00000077450.14_33966388_33979305_1	chr17	-	980	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	199	4930	-25	0	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCCTTCACCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	33979305	33966387	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
ENSMUSG00000078193.3_156193610_156194057_1	chr1	+	319	2	Genic_Genomic	ENSMUSG00000078193.3	novel	445	1	NA	NA	0	3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	AATAAA	-21	NA	156193609	156194057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_156193657_156193785
ENSMUSG00000078193.3_156193610_156194057_2	chr1	+	346	2	Genic_Genomic	ENSMUSG00000078193.3	novel	445	1	NA	NA	0	3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	AATAAA	-21	NA	156193609	156194057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_156193675_156193776
ENSMUSG00000078193.3_156193610_156194057_3	chr1	+	346	2	Genic_Genomic	ENSMUSG00000078193.3	novel	445	1	NA	NA	0	3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	AATAAA	-21	NA	156193609	156194057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_156193684_156193785
ENSMUSG00000078193.3_156193610_156194057_4	chr1	+	354	2	Genic_Genomic	ENSMUSG00000078193.3	novel	445	1	NA	NA	0	3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	AATAAA	-21	NA	156193609	156194057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_156193664_156193757
ENSMUSG00000078193.3_156193610_156194112_1	chr1	+	425	2	Genic_Genomic	ENSMUSG00000078193.3	novel	445	1	NA	NA	0	58	multi-exon	FALSE	canonical	0	0	junction_1	0	2052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGACAGTGGGTGAGGA	NA	False	NA	NA	False	NA	NA	NA	156193609	156194112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_156193792_156193869
ENSMUSG00000078300.4_12574975_12576179_1	chr15	+	1149	2	Genic_Genomic	ENSMUSG00000078300.4	novel	1002	1	NA	NA	0	203	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCATAGAGAGTCAGAGAC	162	False	NA	NA	False	AATAAA	-37	NA	12574974	12576179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_12575528_12575583
ENSMUSG00000078300.4_12574975_12576179_2	chr15	+	474	2	Genic_Genomic	ENSMUSG00000078300.4	novel	1002	1	NA	NA	0	203	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCATAGAGAGTCAGAGAC	162	False	NA	NA	False	AATAAA	-37	NA	12574974	12576179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_12575216_12575946
ENSMUSG00000078300.4_12574975_12576179_3	chr15	+	947	2	Genic_Genomic	ENSMUSG00000078300.4	novel	1002	1	NA	NA	0	203	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCATAGAGAGTCAGAGAC	162	False	NA	NA	False	AATAAA	-37	NA	12574974	12576179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_12575421_12575678
ENSMUSG00000078427.4_128657801_128713498_1	chr10	+	889	11	NIC	ENSMUSG00000078427.4	novel	1084	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1288	junction_2	1269.59119798461	13269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128657800	128713498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_128657841_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ENSMUSG00000078427.4_128657801_128713498_2	chr10	+	886	11	NNC	ENSMUSG00000078427.4	novel	1084	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1482.17282730456	13158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128657800	128713498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713207
ENSMUSG00000078429.10_126834678_126835838_1	chr10	+	1020	2	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	3196	0	at_least_one_novel_splicesite	TRUE	canonical	3	168	junction_1	0	333	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	13	True	AATAAA	-19	NA	126834677	126835838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_126835253_126835393
ENSMUSG00000078429.10_126834764_126835838_1	chr10	+	933	2	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	3282	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	293	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	13	True	AATAAA	-19	NA	126834763	126835838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_126835238_126835379
ENSMUSG00000078495.11_147838431_147860301_1	chr4	-	2717	4	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	106.377733676847	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	8362	False	NA	NA	False	NA	NA	NA	147860301	147838430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_147840693_147842158_147842286_147845677_147845800_147860095
ENSMUSG00000078495.11_147838431_147860301_2	chr4	-	2684	4	NNC	ENSMUSG00000078495.11	novel	2405	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	106.377733676847	1734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	8362	False	NA	NA	False	NA	NA	NA	147860301	147838430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_147840693_147842158_147842286_147845677_147845826_147860154
ENSMUSG00000078495.11_147838431_147894035_1	chr4	-	2623	5	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	210	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	107.790015771406	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	9733	False	NA	NA	False	NA	NA	NA	147894035	147838430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_147840693_147842158_147842286_147845677_147845736_147891546_147891641_147893953
ENSMUSG00000078495.11_147840464_147860301_1	chr4	-	434	3	NIC	ENSMUSG00000078495.11	novel	2405	4	NA	NA	-11	-1808	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	9	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTGTAA	8362	False	NA	NA	False	AATACA	-2	NA	147860301	147840463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_147840693_147845677_147845736_147860154
ENSMUSG00000078496.10_147314730_147597037_1	chr4	+	628	4	Fusion	ENSMUSG00000078496.10_ENSMUSG00000087207.9	novel	1244	3	NA	NA	-11	-840	multi-exon	FALSE	canonical	0	0	junction_1	138.96362433705	576	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTGAATGTGACAAATG	4099	False	NA	17	True	NA	NA	NA	147314729	147597037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_147314893_147591995_147592098_147595209_147595337_147596801
ENSMUSG00000078496.10_147394999_147597037_1	chr4	+	613	4	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-181875	-840	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	137.215969268239	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTGAATGTGACAAATG	NA	False	NA	17	True	NA	NA	NA	147394998	147597037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147395147_147591995_147592098_147595209_147595337_147596801
ENSMUSG00000078496.10_147394999_147597037_2	chr4	+	566	4	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-181875	-840	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	137.652541648246	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTGAATGTGACAAATG	NA	False	NA	17	True	NA	NA	NA	147394998	147597037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147395147_147592042_147592098_147595209_147595337_147596801
ENSMUSG00000078496.10_147394999_147597205_1	chr4	+	734	4	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-181875	-672	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	137.652541648246	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTGACTGTGACAAATG	NA	False	NA	NA	False	NA	NA	NA	147394998	147597205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147395147_147592042_147592098_147595209_147595337_147596801
ENSMUSG00000078496.10_147445762_147597037_1	chr4	+	566	4	Fusion	ENSMUSG00000078496.10_ENSMUSG00000078497.10	novel	1244	3	NA	NA	2	-840	multi-exon	FALSE	canonical	0	0	junction_1	138.96362433705	527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTGAATGTGACAAATG	2371	False	NA	17	True	NA	NA	NA	147445761	147597037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_147445910_147592042_147592098_147595209_147595337_147596801
ENSMUSG00000078496.10_147449042_147597037_1	chr4	+	550	4	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-127832	-840	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.96362433705	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTGAATGTGACAAATG	5651	False	NA	17	True	NA	NA	NA	147449041	147597037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147449174_147592042_147592098_147595209_147595337_147596801
ENSMUSG00000078496.10_147533649_147597037_1	chr4	+	648	5	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43225	-840	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_2	123.817153496598	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTGAATGTGACAAATG	NA	False	NA	17	True	NA	NA	NA	147533648	147597037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147533786_147536170_147536264_147592042_147592098_147595209_147595337_147596801
ENSMUSG00000078496.10_147576874_147596904_2	chr4	+	420	4	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	0	-973	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_1	92.8906166771793	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTTAGCAATGTTATTC	NA	False	NA	NA	False	NA	NA	NA	147576873	147596904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147577009_147592042_147592098_147595209_147595337_147596801
ENSMUSG00000078496.10_147576874_147597037_1	chr4	+	651	5	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	0	-840	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	123.241632576009	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTGAATGTGACAAATG	NA	False	NA	17	True	NA	NA	NA	147576873	147597037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147577009_147578832_147578931_147592042_147592098_147595209_147595337_147596801
ENSMUSG00000078496.10_147576874_147597037_2	chr4	+	600	4	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	0	-840	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	117.848301736691	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTGAATGTGACAAATG	NA	False	NA	17	True	NA	NA	NA	147576873	147597037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147577009_147591995_147592098_147595209_147595337_147596801
ENSMUSG00000078496.10_147576874_147597037_3	chr4	+	553	4	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	0	-840	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_1	92.8906166771793	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTGAATGTGACAAATG	NA	False	NA	17	True	NA	NA	NA	147576873	147597037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147577009_147592042_147592098_147595209_147595337_147596801
ENSMUSG00000078496.10_147576874_147597205_1	chr4	+	819	5	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	0	-672	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	123.241632576009	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTGACTGTGACAAATG	NA	False	NA	NA	False	NA	NA	NA	147576873	147597205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147577009_147578832_147578931_147592042_147592098_147595209_147595337_147596801
ENSMUSG00000078496.10_147576874_147597205_2	chr4	+	721	4	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	0	-672	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_1	92.8906166771793	576	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTGACTGTGACAAATG	NA	False	NA	NA	False	NA	NA	NA	147576873	147597205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147577009_147592042_147592098_147595209_147595337_147596801
ENSMUSG00000078496.10_147576874_147600521_1	chr4	+	3214	8	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	0	2578	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	124.535545290557	3225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTTGCTTTGGTTGTTT	NA	False	NA	8	True	NA	NA	NA	147576873	147600521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147577009_147578832_147578931_147592042_147592098_147595209_147595337_147596801_147597429_147597511_147597998_147598082_147598301_147599053
ENSMUSG00000078496.10_147576874_147600521_2	chr4	+	2695	6	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	0	2578	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	129.181422813035	2447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTTGCTTTGGTTGTTT	NA	False	NA	8	True	NA	NA	NA	147576873	147600521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147577009_147592042_147592098_147595209_147595337_147596801_147597210_147597965_147598507_147599092
ENSMUSG00000078497.10_147209685_147475035_1	chr4	+	782	5	Fusion	ENSMUSG00000078497.10_ENSMUSG00000082779.2	novel	454	2	NA	NA	-28	289	multi-exon	FALSE	canonical	3	21	junction_1	206.004095833068	424	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAGTGAGATGAACACTT	NA	False	NA	NA	False	CATAAA	-18	NA	147209684	147475035	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_147209785_147447267_147447362_147469676_147469759_147472778_147472906_147474656
ENSMUSG00000078497.10_147445760_147474765_1	chr4	+	562	5	FSM	ENSMUSG00000078497.10	ENSMUST00000154154.2	1250	5	-8	696	0	19	multi-exon	FALSE	canonical	3	18	junction_1	206.815739246316	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTCTAGCAATATAATTC	2369	False	NA	NA	False	TTTAAA	-6	NA	147445759	147474765	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_147445910_147447267_147447362_147469676_147469759_147472778_147472906_147474656
ENSMUSG00000078497.10_147445760_147474918_2	chr4	+	715	5	FSM	ENSMUSG00000078497.10	ENSMUST00000154154.2	1250	5	-8	543	0	172	multi-exon	FALSE	canonical	3	18	junction_1	206.815739246316	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCTTCTATCATTAGTC	2369	False	NA	6	True	TATAAA	-21	NA	147445759	147474918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_147445910_147447267_147447362_147469676_147469759_147472778_147472906_147474656
ENSMUSG00000078497.10_147445760_147475844_1	chr4	+	1641	5	FSM	ENSMUSG00000078497.10	ENSMUST00000154154.2	1250	5	-8	-383	0	383	multi-exon	FALSE	canonical	3	18	junction_1	206.815739246316	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATCACATCTTAGTATT	2369	False	NA	NA	False	NA	NA	NA	147445759	147475844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_147445910_147447267_147447362_147469676_147469759_147472778_147472906_147474656
ENSMUSG00000078498.6_147314738_147418191_1	chr4	+	3051	6	Fusion	ENSMUSG00000087207.9_ENSMUSG00000078498.6	novel	585	4	NA	NA	-3	0	multi-exon	FALSE	canonical	0	0	junction_3	204.124079912195	3227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	4107	False	NA	NA	False	NA	NA	NA	147314737	147418191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_147314893_147316807_147316901_147337753_147337859_147409230_147409335_147413438_147413566_147415724
ENSMUSG00000078498.6_147390131_147416926_1	chr4	+	1535	4	FSM	ENSMUSG00000078498.6	ENSMUST00000148762.4	2800	4	0	1265	0	0	multi-exon	FALSE	canonical	2	12	junction_1	71.5976411777806	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAGAGAATTCATACAGG	NA	False	NA	NA	False	NA	NA	NA	147390130	147416926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_147390233_147409230_147409335_147413438_147413566_147415724
ENSMUSG00000078498.6_147390131_147422024_1	chr4	+	928	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	0	3833	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.8562793538911	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATAGTGGAAAATGTGT	NA	False	NA	13	True	NA	NA	NA	147390130	147422024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147390233_147409230_147409335_147413438_147413566_147415724_147416250_147421954
ENSMUSG00000078498.6_147394999_147415976_1	chr4	+	631	4	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	4868	-950	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	75.7935793234933	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGTTTTCTACCATT	NA	False	NA	NA	False	AATACA	-19	NA	147394998	147415976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147395147_147409230_147409335_147413438_147413566_147415724
ENSMUSG00000078500.4_145508065_145625750_1	chr4	+	688	6	NNC	ENSMUSG00000078500.4	novel	1427	4	NA	NA	-87299	-782	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	97.5807358037436	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGTTTTCTACCATT	NA	False	NA	NA	False	AATACA	-19	NA	145508064	145625750	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_145508131_145510590_145510684_145541336_145541383_145618982_145619087_145623213_145623341_145625498
ENSMUSG00000078500.4_145590657_145625750_1	chr4	+	731	5	NNC	ENSMUSG00000078500.4	novel	1427	4	NA	NA	-4707	-782	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.3495801958527	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGTTTTCTACCATT	5456	False	NA	NA	False	AATACA	-19	NA	145590656	145625750	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_145590812_145593464_145593558_145618982_145619087_145623213_145623341_145625498
ENSMUSG00000078502.11_145237359_145351915_1	chr4	+	2395	7	Fusion	ENSMUSG00000078502.11_ENSMUSG00000078503.10	novel	1221	3	NA	NA	-2	0	multi-exon	TRUE	non_canonical	0	0	junction_1	21.221058723196	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	924	False	NA	NA	False	NA	NA	NA	145237358	145351915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_145237496_145239546_145239640_145343640_145343746_145347127_145347255_145348721_145349454_145350546_145351528_145351695
ENSMUSG00000078502.11_145237359_145351915_2	chr4	+	2349	7	Fusion	ENSMUSG00000078502.11_ENSMUSG00000078503.10	novel	1221	3	NA	NA	-2	0	multi-exon	TRUE	non_canonical	0	0	junction_1	21.221058723196	491	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	924	False	NA	NA	False	NA	NA	NA	145237358	145351915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_145237496_145239546_145239640_145343687_145343746_145347127_145347255_145348721_145349420_145350511_145351528_145351695
ENSMUSG00000078502.11_145237359_145351915_3	chr4	+	2348	7	Fusion	ENSMUSG00000078502.11_ENSMUSG00000078503.10	novel	1221	3	NA	NA	-2	0	multi-exon	FALSE	non_canonical	0	0	junction_1	21.221058723196	509	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	924	False	NA	NA	False	NA	NA	NA	145237358	145351915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_145237496_145239546_145239640_145343687_145343746_145347127_145347255_145348721_145349454_145350546_145351528_145351695
ENSMUSG00000078502.11_145241441_145351915_1	chr4	+	2565	5	Fusion	ENSMUSG00000078502.11_ENSMUSG00000078503.10	novel	1221	3	NA	NA	-13	0	multi-exon	TRUE	canonical	0	0	junction_4	21.5580611373101	1407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	5006	False	NA	NA	False	NA	NA	NA	145241440	145351915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_145241589_145343640_145343746_145347127_145347255_145348721_145349454_145350462
ENSMUSG00000078502.11_145241441_145351915_2	chr4	+	2516	6	Fusion	ENSMUSG00000078502.11_ENSMUSG00000078503.10	novel	1221	3	NA	NA	-13	0	multi-exon	TRUE	canonical	0	0	junction_4	20.6533290294809	1125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	5006	False	NA	NA	False	NA	NA	NA	145241440	145351915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_145241589_145343687_145343746_145347127_145347255_145348721_145349286_145349370_145350039_145350964
ENSMUSG00000078502.11_145241441_145351915_3	chr4	+	2518	5	Fusion	ENSMUSG00000078502.11_ENSMUSG00000078503.10	novel	1221	3	NA	NA	-13	0	multi-exon	FALSE	canonical	0	0	junction_4	18.4661853126194	1386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	5006	False	NA	NA	False	NA	NA	NA	145241440	145351915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_145241589_145343687_145343746_145347127_145347255_145348721_145349454_145350462
ENSMUSG00000078502.11_145311773_145348950_1	chr4	+	639	5	NNC	ENSMUSG00000078502.11	novel	2498	5	NA	NA	0	-835	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	42.6226172354538	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTGTAA	NA	False	NA	NA	False	AATACA	-2	NA	145311772	145348950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_145311905_145314001_145314095_145343687_145343746_145347127_145347255_145348721
ENSMUSG00000078502.11_145311773_145348950_2	chr4	+	756	6	NNC	ENSMUSG00000078502.11	novel	2498	5	NA	NA	0	-835	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_3	35.3406281777786	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTGTAA	NA	False	NA	NA	False	AATACA	-2	NA	145311772	145348950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_145311905_145314001_145314095_145319501_145319572_145343640_145343746_145347127_145347255_145348721
ENSMUSG00000078502.11_145311773_145348950_3	chr4	+	773	6	NNC	ENSMUSG00000078502.11	novel	2498	5	NA	NA	0	-835	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	38.7659644533707	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTGTAA	NA	False	NA	NA	False	AATACA	-2	NA	145311772	145348950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_145311905_145311995_145312083_145314001_145314095_145343640_145343746_145347127_145347255_145348721
ENSMUSG00000078503.10_145237347_145263412_1	chr4	+	632	4	FSM	ENSMUSG00000078503.10	ENSMUST00000105742.8	2996	4	18	2346	0	1923	multi-exon	FALSE	canonical	3	98	junction_2	195.188797492752	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGTTTTCTACCATT	912	False	NA	27	True	AATACA	-19	NA	145237346	145263412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_145237496_145257381_145257486_145261385_145261513_145263160
ENSMUSG00000078503.10_145237347_145265524_1	chr4	+	2848	5	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	0	-234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	222.443251190051	2483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCTTAAAAGAGTATCTG	912	False	NA	40	True	AATAAA	-16	NA	145237346	145265524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_145237496_145239546_145239651_145257381_145257486_145261385_145261513_145263160
ENSMUSG00000078509.2_143716906_143724200_1	chr4	-	2630	4	NNC	ENSMUSG00000078509.2	novel	1753	3	NA	NA	-3261	783	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	11.4406682011537	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGAGTATTTTTTTTC	NA	False	NA	-11	True	AATAAA	-13	NA	143724200	143716905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_143718582_143719503_143720077_143720652_143720966_143724132
ENSMUSG00000078566.9_138492215_138511235_1	chr7	-	2106	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	0	-350	0	350	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	1241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTTCTTGGTTATGAT	NA	False	NA	NA	False	NA	NA	NA	138511235	138492214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
ENSMUSG00000078566.9_138492693_138511235_1	chr7	-	1628	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	0	128	0	-128	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTATATTTACATAA	NA	False	NA	-24	True	AATAAA	-19	NA	138511235	138492692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
ENSMUSG00000078566.9_138493216_138511235_1	chr7	-	1105	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	0	651	0	-651	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGGCCTTATAATCCT	NA	False	NA	NA	False	ATTAAA	-28	NA	138511235	138493215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
ENSMUSG00000078578.10_135144077_135171060_1	chr3	+	671	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	82	759	0	2	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGATTTTCTTATC	NA	False	NA	9	True	AATAAA	-16	NA	135144076	135171060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_135144077_135171821_1	chr3	+	1512	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	0	-774	0	2	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGCTGCCTGGATTA	NA	False	NA	75	True	AATAAA	-15	NA	135144076	135171821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_135144077_135172436_1	chr3	+	2047	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	82	-617	0	0	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	3102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	135144076	135172436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_135144077_135172436_2	chr3	+	2127	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	0	-1389	0	0	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	3146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	135144076	135172436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_135144294_135171060_1	chr3	+	800	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	53	1651	0	2	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGATTTTCTTATC	NA	False	NA	9	True	AATAAA	-16	NA	135144293	135171060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_135144294_135171821_1	chr3	+	1561	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	53	890	0	2	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGCTGCCTGGATTA	NA	False	NA	75	True	AATAAA	-15	NA	135144293	135171821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_135144294_135172436_1	chr3	+	2176	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	53	275	0	0	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	2414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	135144293	135172436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_135145190_135171060_1	chr3	+	849	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	292	1374	218	2	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGATTTTCTTATC	NA	False	NA	9	True	AATAAA	-16	NA	135145189	135171060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_135145190_135171821_1	chr3	+	1610	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	292	613	218	2	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGCTGCCTGGATTA	NA	False	NA	75	True	AATAAA	-15	NA	135145189	135171821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078584.10_119083206_119089884_2	chr4	-	959	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	25	6167	-2	373	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGTCTTTCTTTGTGT	NA	False	NA	-5	True	NA	NA	NA	119089884	119083205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ENSMUSG00000078584.10_119083405_119089884_1	chr4	-	612	5	NNC	ENSMUSG00000078584.10	novel	3689	5	NA	NA	-2	174	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	169.259231653697	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATGATGTAGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	119089884	119083404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089583_119089843
ENSMUSG00000078584.10_119083405_119089884_2	chr4	-	718	5	NNC	ENSMUSG00000078584.10	novel	7151	5	NA	NA	-2	174	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	164.079820514285	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATGATGTAGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	119089884	119083404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089821
ENSMUSG00000078584.10_119083405_119089884_3	chr4	-	760	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	25	6366	-2	174	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATGATGTAGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	119089884	119083404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ENSMUSG00000078588.11_117692530_117726502_1	chr4	-	3197	14	Fusion	ENSMUSG00000028541.15_ENSMUSG00000091237.2	novel	4093	13	NA	NA	-747	-34	multi-exon	FALSE	non_canonical	0	0	junction_1	0	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTGTTGTGTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	117726502	117692529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_-_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ENSMUSG00000078588.11_117692635_117726502_1	chr4	-	3092	14	Fusion	ENSMUSG00000028541.15_ENSMUSG00000091237.2	novel	4093	13	NA	NA	-747	-139	multi-exon	FALSE	non_canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGCGCCCAGGTGGCTT	NA	False	NA	NA	False	NA	NA	NA	117726502	117692634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_-_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ENSMUSG00000078622.9_106090180_106107170_1	chr11	-	3247	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	0	1946	0	1425	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	-4	True	ATTAAA	-14	NA	106107170	106090179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ENSMUSG00000078622.9_106090180_106107636_1	chr11	-	3151	13	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-466	1425	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_12	175.732336713158	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	-4	True	ATTAAA	-14	NA	106107636	106090179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106107536
ENSMUSG00000078622.9_106091482_106107170_1	chr11	-	1945	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	0	3248	0	123	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCAGTGCGTTACTTTGG	NA	False	NA	NA	False	TATAAA	-41	NA	106107170	106091481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ENSMUSG00000078630.9_101545623_101548745_1	chr7	-	708	5	NIC	ENSMUSG00000078630.9	novel	2796	4	NA	NA	4247	1954	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTTCCCCAGGTCTGAGC	2046	False	NA	NA	False	NA	NA	NA	101548745	101545622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_101545658_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUSG00000078630.9_101545623_101548745_2	chr7	-	793	6	NIC	ENSMUSG00000078630.9	novel	2796	4	NA	NA	4247	1954	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1837	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTTCCCCAGGTCTGAGC	2046	False	NA	NA	False	NA	NA	NA	101548745	101545622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUSG00000078630.9_101545623_101548745_3	chr7	-	788	6	NIC	ENSMUSG00000078630.9	novel	2796	4	NA	NA	4247	1954	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTTCCCCAGGTCTGAGC	2046	False	NA	NA	False	NA	NA	NA	101548745	101545622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_101545658_101546939_101547025_101547153_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUSG00000078630.9_101546070_101548745_1	chr7	-	942	6	NNC	ENSMUSG00000078630.9	novel	2796	4	NA	NA	4247	1507	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGATCCCGAAAGCACTGA	2046	False	NA	NA	False	AAAAAG	-11	NA	101548745	101546069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_101546254_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUSG00000078630.9_101546070_101548745_2	chr7	-	1256	6	NIC	ENSMUSG00000078630.9	novel	2796	4	NA	NA	4247	1507	intron_retention	FALSE	non_canonical	0	0	junction_1	0	471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGATCCCGAAAGCACTGA	2046	False	NA	NA	False	AAAAAG	-11	NA	101548745	101546069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_101546568_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUSG00000078630.9_101546168_101548745_1	chr7	-	844	6	NNC	ENSMUSG00000078630.9	novel	2796	4	NA	NA	4247	1409	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAATTTGACCCACGCA	2046	False	NA	NA	False	NA	NA	NA	101548745	101546167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_101546254_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUSG00000078653.5_101179088_101193067_1	chr11	+	2010	12	NIC	ENSMUSG00000078653.5	novel	2335	7	NA	NA	2207	5924	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCCGGTCGGCTAGCTG	2867	False	NA	NA	False	NA	NA	NA	101179087	101193067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553_101192683_101192957
ENSMUSG00000078653.5_101179088_101193067_2	chr11	+	2643	11	NIC	ENSMUSG00000078653.5	novel	2335	7	NA	NA	2207	5924	intron_retention	FALSE	non_canonical	0	0	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCCGGTCGGCTAGCTG	2867	False	NA	NA	False	NA	NA	NA	101179087	101193067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101187143_101189834_101189903_101192553_101192683_101192957
ENSMUSG00000078656.12_101144556_101150149_1	chr11	+	857	6	FSM	ENSMUSG00000078656.12	ENSMUST00000042477.13	1106	6	23	226	0	0	multi-exon	FALSE	canonical	3	1136	junction_3	45.4682306671372	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACCCACCTACATGCGCC	NA	False	NA	NA	False	TATAAA	-35	NA	101144555	101150149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149735
ENSMUSG00000078656.12_101144556_101150372_1	chr11	+	991	5	FSM	ENSMUSG00000078656.12	ENSMUST00000144306.9	361	5	0	-630	0	1	multi-exon	FALSE	canonical	3	19	junction_3	527.253733983933	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGCCTGTTACTACTG	NA	False	NA	17	True	ATTAAA	-14	NA	101144555	101150372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101147703_101147780_101149735
ENSMUSG00000078671.12_73154858_73191494_1	chr7	-	1142	7	ISM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	0	78472	0	2750	5prime_fragment	FALSE	canonical	3	19	junction_5	9.22707369044427	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAAAAAGCAACCTAAGAT	NA	False	NA	NA	False	NA	NA	NA	73191494	73154857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
ENSMUSG00000078681.11_65343215_65351650_1	chr7	+	773	4	NIC	ENSMUSG00000078681.11	novel	908	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	239.202842792472	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACGACAACCCAGAACTTT	NA	False	NA	17	True	AATAAA	-17	NA	65343214	65351650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_65343318_65344890_65345076_65347443_65347619_65351340
ENSMUSG00000078684.9_88682523_88724087_1	chr3	+	2692	14	ISM	ENSMUSG00000078684.9	ENSMUST00000135913.2	6190	19	0	8807	0	-8807	5prime_fragment	FALSE	non_canonical	0	0	junction_8	84.5009015742667	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTATCACCACTTTCCT	NA	False	NA	NA	False	NA	NA	NA	88682522	88724087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88702770_88702795_88706921_88707026_88715213_88715410_88715859_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316
ENSMUSG00000078684.9_88730874_88733286_1	chr3	+	1006	3	ISM	ENSMUSG00000078684.9	ENSMUST00000135913.2	6190	19	48351	-392	48351	392	3prime_fragment	FALSE	canonical	3	272	junction_2	41	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88730873	88733286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_88731105_88731656_88731842_88732696
ENSMUSG00000078684.9_88730998_88733286_1	chr3	+	882	3	ISM	ENSMUSG00000078684.9	ENSMUST00000135913.2	6190	19	48475	-392	48475	392	3prime_fragment	FALSE	canonical	3	272	junction_2	41	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88730997	88733286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_88731105_88731656_88731842_88732696
ENSMUSG00000078689.9_59964294_60007274_1	chr4	+	796	7	FSM	ENSMUSG00000078689.9	ENSMUST00000107521.8	642	7	0	-154	0	0	multi-exon	FALSE	canonical	3	12	junction_2	4.92442890089805	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTCTCTGTGTCCAGA	16	False	NA	NA	False	AATAAA	-21	NA	59964293	60007274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_59964368_60003977_60004112_60004813_60004888_60005471_60005583_60005921_60006024_60006188_60006235_60007019
ENSMUSG00000078695.9_97576652_97579447_1	chr11	+	864	3	FSM	ENSMUSG00000078695.9	ENSMUST00000107583.3	737	3	-127	0	0	0	multi-exon	FALSE	canonical	3	940	junction_1	75.5	5782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGTTTCTGTGGTCAC	2325	False	NA	-1	True	AATAAA	-21	NA	97576651	97579447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_97577042_97577326_97577447_97579093
ENSMUSG00000078695.9_97576779_97579447_1	chr11	+	718	3	NNC	ENSMUSG00000078695.9	novel	737	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	62	junction_1	514.5	5260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGTTTCTGTGGTCAC	2452	False	NA	-1	True	AATAAA	-21	NA	97576778	97579447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_97577042_97577345_97577447_97579093
ENSMUSG00000078700.11_96798642_96807240_1	chr11	+	1778	14	NIC	ENSMUSG00000078700.11	novel	3542	7	NA	NA	-8454	-37052	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1444	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACCCCGGCCCAGCCTA	9397	False	NA	NA	False	NA	NA	NA	96798641	96807240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ENSMUSG00000078700.11_96798642_96807339_1	chr11	+	1877	14	NIC	ENSMUSG00000078700.11	novel	3542	7	NA	NA	-8454	-36953	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCAATCCAAGACCACG	9397	False	NA	NA	False	NA	NA	NA	96798641	96807339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ENSMUSG00000078706.5_96142470_96160068_1	chr11	+	699	4	NNC	ENSMUSG00000078706.5	novel	1172	3	NA	NA	0	4374	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	2.82842712474619	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCACATGTCCTTTTGGGC	8814	False	NA	4	True	AATAAA	-17	NA	96142469	96160068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_96142640_96154999_96155212_96155549_96155672_96159873
ENSMUSG00000078762.11_30353141_30364385_1	chr7	-	2140	17	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	60.1308144277957	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCACTGCCCAGTTTT	NA	False	NA	-9	True	AATAAA	-10	NA	30364385	30353140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361445_30362647_30362711_30364255
ENSMUSG00000078765.12_30261288_30263052_1	chr7	+	639	4	NIC	ENSMUSG00000078765.12	novel	715	4	NA	NA	-1438	-431	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTCAAGCCTCCCCGCG	NA	False	NA	NA	False	NA	NA	NA	30261287	30263052	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_30261560_30261748_30261854_30262220_30262364_30262933
ENSMUSG00000078765.12_30262761_30264785_1	chr7	+	1036	7	NIC	ENSMUSG00000078765.12	novel	884	8	NA	NA	0	1	intron_retention	FALSE	canonical	3	411	junction_1	82.4386977631797	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTGTGGTTTCCTT	NA	False	NA	31	True	AATAAA	-19	NA	30262760	30264785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30264033_30264127_30264224_30264519
ENSMUSG00000078765.12_30262761_30264785_2	chr7	+	986	7	NIC	ENSMUSG00000078765.12	novel	884	8	NA	NA	0	1	intron_retention	FALSE	canonical	3	39	junction_1	208.616407685387	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTGTGGTTTCCTT	NA	False	NA	31	True	AATAAA	-19	NA	30262760	30264785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_30262775_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30264033_30264127_30264224_30264519
ENSMUSG00000078765.12_30262761_30264785_3	chr7	+	848	8	NIC	ENSMUSG00000078765.12	novel	860	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	195.900745380962	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTGTGGTTTCCTT	NA	False	NA	31	True	AATAAA	-19	NA	30262760	30264785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_30262834_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ENSMUSG00000078765.12_30262761_30264785_5	chr7	+	814	8	NIC	ENSMUSG00000078765.12	novel	884	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	193.245851659676	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTGTGGTTTCCTT	NA	False	NA	31	True	AATAAA	-19	NA	30262760	30264785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_30262775_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ENSMUSG00000078765.12_30263251_30264785_1	chr7	+	816	6	FSM	ENSMUSG00000078765.12	ENSMUST00000165524.9	582	6	-53	-181	0	1	multi-exon	FALSE	canonical	3	472	junction_3	63.1905056159547	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTGTGGTTTCCTT	74	False	NA	31	True	AATAAA	-19	NA	30263250	30264785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ENSMUSG00000078773.12_11558972_11585750_1	chr4	+	2459	5	NNC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	91.7261549395809	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGAATTTATGTTATG	25	True	NA	NA	False	AATAAA	-15	NA	11558971	11585750	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11578714_11583676
ENSMUSG00000078776.10_27861806_27864236_1	chr7	+	1033	3	ISM	ENSMUSG00000078776.10	ENSMUST00000150948.2	7895	19	32565	-16	32565	0	3prime_fragment	FALSE	canonical	3	5	junction_2	2.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTCTCCTGCTGTCT	1202	False	NA	NA	False	AATAAA	-15	NA	27861805	27864236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_27862400_27863693_27863966_27864069
ENSMUSG00000078779.5_27538032_27556132_1	chr7	+	3706	5	FSM	ENSMUSG00000078779.5	ENSMUST00000205701.2	3437	5	0	-269	0	269	multi-exon	FALSE	canonical	3	101	junction_4	40.2639727299729	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCACTGGGTGTAT	408	False	NA	-68	True	NA	NA	NA	27538031	27556132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27538135_27542259_27542313_27543709_27543837_27545828_27545928_27552808
ENSMUSG00000078786.10_26886432_26895578_1	chr7	+	1243	7	NNC	ENSMUSG00000078786.10	novel	1748	7	NA	NA	-8774	-8008	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGGTCCCGCCCCCTG	NA	False	NA	NA	False	NA	NA	NA	26886431	26895578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892460_26894864_26894982_26895415
ENSMUSG00000078786.10_26886432_26895578_2	chr7	+	1247	7	NIC	ENSMUSG00000078786.10	novel	1748	7	NA	NA	-8774	-8008	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	3983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGGTCCCGCCCCCTG	NA	False	NA	NA	False	NA	NA	NA	26886431	26895578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895415
ENSMUSG00000078786.10_26886432_26895578_3	chr7	+	1370	8	NIC	ENSMUSG00000078786.10	novel	7247	8	NA	NA	-8774	-8008	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGGTCCCGCCCCCTG	NA	False	NA	NA	False	NA	NA	NA	26886431	26895578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26893506_26893630_26894868_26894982_26895415
ENSMUSG00000078786.10_26886432_26895578_5	chr7	+	1238	7	NNC	ENSMUSG00000078786.10	novel	1748	7	NA	NA	-8774	-8008	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGGTCCCGCCCCCTG	NA	False	NA	NA	False	NA	NA	NA	26886431	26895578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_26886790_26888290_26888380_26888783_26888958_26891028_26891197_26892294_26892468_26894868_26894982_26895415
ENSMUSG00000078786.10_26895206_26903586_1	chr7	+	1589	7	FSM	ENSMUSG00000078786.10	ENSMUST00000179391.8	1748	7	0	159	0	0	multi-exon	FALSE	canonical	2	9	junction_1	4.48763733927875	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACATTTTCAGTCCAGT	NA	False	NA	10	True	NA	NA	NA	26895205	26903586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_26895533_26896330_26896792_26899978_26900048_26900444_26900570_26901832_26901963_26902051_26902123_26903180
ENSMUSG00000078789.10_75068522_75069631_1	chr11	-	886	2	FSM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	30	1754	-18	105	multi-exon	FALSE	canonical	3	105	junction_1	0	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTGCTGCCCC	1667	False	NA	0	True	AATAAA	-21	NA	75069631	75068521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_75069214_75069437
ENSMUSG00000078789.10_75068627_75081345_1	chr11	-	1981	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	0	158	0	-105	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACACACATAAGCCCAGA	NA	False	NA	-105	True	NA	NA	NA	75081345	75068626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
ENSMUSG00000078812.11_69807546_69812091_1	chr11	-	1222	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	121	0	-75	0	multi-exon	FALSE	canonical	3	20384	junction_3	507.007534460781	27909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	6392	False	NA	-15	True	AATAAA	-20	NA	69812091	69807545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ENSMUSG00000078812.11_69807857_69812091_1	chr11	-	911	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	121	311	-75	0	multi-exon	FALSE	canonical	3	20384	junction_3	507.007534460781	2269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAAGCTGGATTCTGG	6392	False	NA	NA	False	NA	NA	NA	69812091	69807856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ENSMUSG00000078813.4_3648289_3664099_1	chr7	-	2875	18	NIC	ENSMUSG00000078813.4	novel	2222	4	NA	NA	4740	14808	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGGCGGCGGAGGCCTCC	3116	False	NA	NA	False	NA	NA	NA	3664099	3648288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ENSMUSG00000078813.4_3661278_3664099_1	chr7	-	745	4	NIC	ENSMUSG00000078813.4	novel	2222	4	NA	NA	4740	1819	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGACAATGGTATGTTCA	3116	False	NA	NA	False	NA	NA	NA	3664099	3661277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_3661391_3661607_3661741_3662379_3662506_3663726
ENSMUSG00000078813.4_3664057_3668469_1	chr7	-	892	4	FSM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	370	960	370	-960	multi-exon	FALSE	canonical	3	158	junction_3	1.69967317119759	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTTTACCAAAAAATGTC	9073	False	NA	NA	False	TATAAA	-35	NA	3668469	3664056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_3664360_3665769_3666024_3666680_3666861_3668314
ENSMUSG00000078861.9_177696680_177720269_1	chr2	-	569	3	NNC	ENSMUSG00000078861.9	novel	1572	2	NA	NA	0	12808	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	48	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCTGGAAAGTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	177720269	177696679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_177697003_177711615_177711743_177720150
ENSMUSG00000078861.9_177701959_177720269_1	chr2	-	783	4	NNC	ENSMUSG00000078861.9	novel	1372	3	NA	NA	0	7529	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	43.3384612350534	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGTGTCTGAGTGTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	177720269	177701958	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_177702435_177711347_177711409_177711615_177711743_177720150
ENSMUSG00000078861.9_177710082_177720269_1	chr2	-	1573	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	0	-201	0	187	multi-exon	FALSE	canonical	3	51	junction_1	29	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	177720269	177710081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_177711409_177711615_177711743_177720150
ENSMUSG00000078861.9_177711196_177720269_1	chr2	-	459	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	0	913	0	-913	multi-exon	FALSE	canonical	3	51	junction_1	29	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAACTGTTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	177720269	177711195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_177711409_177711615_177711743_177720150
ENSMUSG00000078864.11_177189999_177411173_1	chr2	+	1299	4	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	-9	-582	multi-exon	FALSE	canonical	3	49	junction_2	20.8326666559997	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTTCCCATTTCATGT	NA	False	NA	NA	False	NA	NA	NA	177189998	177411173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_+_177190111_177404638_177404694_177409836_177409964_177410168
ENSMUSG00000078864.11_177189999_177411306_1	chr2	+	1432	4	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	-9	-449	multi-exon	FALSE	canonical	3	49	junction_2	20.8326666559997	475	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCATATAGATAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	177189998	177411306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_+_177190111_177404638_177404694_177409836_177409964_177410168
ENSMUSG00000078864.11_177189999_177411491_3	chr2	+	412	4	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1074	3	NA	NA	-9	-264	multi-exon	FALSE	canonical	3	66	junction_1	90.6899479913108	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	177189998	177411491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_+_177190111_177409836_177409964_177410168_177410230_177411379
ENSMUSG00000078864.11_177189999_177411491_5	chr2	+	569	6	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1074	3	NA	NA	-9	-264	multi-exon	FALSE	canonical	3	31	junction_2	89.8590006621485	400	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	177189998	177411491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_+_177190111_177193535_177193591_177405994_177406097_177409836_177409964_177410168_177410230_177411379
ENSMUSG00000078864.11_177401081_177411491_1	chr2	+	621	7	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	0	-264	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	130.74784893068	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	177401080	177411491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_177401169_177404638_177404694_177405627_177405769_177409531_177409569_177409836_177409964_177410168_177410230_177411379
ENSMUSG00000078864.11_177401081_177411491_2	chr2	+	443	5	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	0	-264	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	122.051218756717	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	177401080	177411491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_177401169_177404638_177404694_177409836_177409964_177410168_177410230_177411379
ENSMUSG00000078864.11_177401081_177411491_4	chr2	+	545	6	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	0	-264	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_3	118.732640836461	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	177401080	177411491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
ENSMUSG00000078864.11_177401081_177411491_5	chr2	+	480	6	FSM	ENSMUSG00000078864.11	ENSMUST00000148388.2	744	6	0	264	0	-264	multi-exon	FALSE	canonical	3	97	junction_4	86.0497530501977	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	177401080	177411491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_177401169_177404638_177404694_177409531_177409569_177409836_177409964_177410168_177410230_177411379
ENSMUSG00000078865.9_177259260_177275487_1	chr2	-	3076	6	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5484	1737	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	475.137706354695	3638	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTCTGTCCATCCT	NA	False	NA	NA	False	NA	NA	NA	177275487	177259259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_177261595_177261679_177262087_177263226_177263288_177263479_177263607_177266761_177266817_177275396
ENSMUSG00000078865.9_177261975_177275487_1	chr2	-	264	3	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5484	-978	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	344	266	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	177275487	177261974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_177262087_177263226_177263288_177275396
ENSMUSG00000078865.9_177261975_177275487_2	chr2	-	391	4	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5484	-978	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	500.198182945742	833	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	177275487	177261974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_177262087_177263226_177263288_177263479_177263607_177275396
ENSMUSG00000078865.9_177261975_177275487_3	chr2	-	446	5	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5484	-978	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	437.731652956466	2489	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	177275487	177261974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_177262087_177263226_177263288_177263479_177263607_177266761_177266817_177275396
ENSMUSG00000078865.9_177262176_177275487_1	chr2	-	1330	3	NNC	ENSMUSG00000078865.9	novel	531	4	NA	NA	-5484	844	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	611	3704	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATTTTAAAAGAATTCA	NA	False	NA	NA	False	NA	NA	NA	177275487	177262175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_177263288_177263479_177263607_177275396
ENSMUSG00000078866.11_177156526_177166413_1	chr2	+	1246	3	ISM	ENSMUSG00000078866.11	ENSMUST00000108952.4	1569	4	-113	1583	0	-1583	5prime_fragment	FALSE	canonical	3	64	junction_2	12	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTCCCATTTCATGTA	NA	False	NA	NA	False	NA	NA	NA	177156525	177166413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_177156642_177165078_177165206_177165410
ENSMUSG00000078867.10_176919504_177090112_1	chr2	-	1304	5	Fusion	ENSMUSG00000083817.2_ENSMUSG00000078867.10	novel	2135	3	NA	NA	0	-2238	multi-exon	FALSE	canonical	1	4	junction_2	140.284309528899	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGAGTTCTTCCTTTT	NA	False	NA	-3	True	NA	NA	NA	177090112	176919503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_-_176920428_177081219_177081347_177085086_177085189_177086489_177086545_177090016
ENSMUSG00000078867.10_177079694_177090112_2	chr2	-	485	6	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_2	99.4633600880244	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	177090112	177079693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177086489_177086545_177090016
ENSMUSG00000078867.10_177079694_177251317_2	chr2	-	478	4	NNC	ENSMUSG00000078867.10	novel	588	7	NA	NA	-161204	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	105.54725113532	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	177251317	177079693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_177079803_177080953_177081015_177081219_177081347_177251136
ENSMUSG00000078867.10_177079878_177090112_1	chr2	-	1449	4	NNC	ENSMUSG00000078867.10	novel	1415	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	24.0416305603426	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTCATATAGATAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	177090112	177079877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_177081015_177081219_177081347_177086401_177086480_177090005
ENSMUSG00000078868.4_177007591_177016172_2	chr2	-	348	4	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-72	-1278	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	17.5941909605289	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	177016172	177007590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_177007703_177008856_177008918_177009124_177009225_177016097
ENSMUSG00000078869.3_176802701_176964135_1	chr2	-	477	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5306	153746	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	13	599	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTAGGTCGTTTCTT	NA	False	NA	-4	True	AATAAA	-17	NA	176964135	176802700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_176803028_176958542_176958604_176964046
ENSMUSG00000078869.3_176957290_176964135_1	chr2	-	262	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5306	-843	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	218	1422	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATGACTGTAACCAATG	NA	False	NA	-38	True	NA	NA	NA	176964135	176957289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_176957402_176958542_176958604_176964046
ENSMUSG00000078869.3_176957290_176964135_2	chr2	-	389	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5306	-843	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_3	127.14908135291	4790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATGACTGTAACCAATG	NA	False	NA	-38	True	NA	NA	NA	176964135	176957289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_176957402_176958542_176958604_176958795_176958923_176964046
ENSMUSG00000078870.10_176885960_176969607_1	chr2	-	446	5	NNC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	-71393	682	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	131.943169584484	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	176969607	176885959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_176886072_176887228_176887290_176887494_176887622_176894619_176894675_176969516
ENSMUSG00000078870.10_176886186_176898244_2	chr2	-	1398	4	FSM	ENSMUSG00000078870.10	ENSMUST00000108964.2	912	4	-30	-456	-30	456	multi-exon	FALSE	canonical	3	79	junction_3	114.822568435923	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGATTGCTCTGTTCAA	NA	False	NA	NA	False	NA	NA	NA	176898244	176886185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_176887290_176887494_176887622_176894619_176894675_176898132
ENSMUSG00000078870.10_176886376_176898244_1	chr2	-	1208	4	FSM	ENSMUSG00000078870.10	ENSMUST00000108964.2	912	4	-30	-266	-30	266	multi-exon	FALSE	canonical	3	79	junction_3	114.822568435923	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGTGCAAACACTGTGA	NA	False	NA	NA	False	NA	NA	NA	176898244	176886375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_176887290_176887494_176887622_176894619_176894675_176898132
ENSMUSG00000078872.10_176766113_176776580_1	chr2	+	378	3	ISM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	0	2247	0	147	5prime_fragment	FALSE	canonical	3	143	junction_2	82	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAATTTTTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	176766112	176776580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_176766152_176776035_176776163_176776368
ENSMUSG00000078872.10_176766113_176778017_1	chr2	+	1815	3	ISM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	0	810	0	-810	5prime_fragment	FALSE	canonical	3	143	junction_2	82	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAATTTAAAACAATTCA	NA	False	NA	NA	False	NA	NA	NA	176766112	176778017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_176766152_176776035_176776163_176776368
ENSMUSG00000078872.10_176766113_176778218_1	chr2	+	339	4	FSM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	0	609	0	-609	multi-exon	FALSE	canonical	3	143	junction_2	72.8666971637631	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	4	True	NA	NA	NA	176766112	176778218	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_176766152_176776035_176776163_176776368_176776430_176778106
ENSMUSG00000078872.10_176766113_176778218_2	chr2	+	392	5	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	0	-609	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	64.2845237985007	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	4	True	NA	NA	NA	176766112	176778218	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_176766152_176772059_176772113_176776035_176776163_176776368_176776430_176778106
ENSMUSG00000078872.10_176766113_176781483_1	chr2	+	3604	4	FSM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	0	-2656	0	2343	multi-exon	FALSE	canonical	3	143	junction_2	72.8666971637631	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	AATAAA	-18	NA	176766112	176781483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_176766152_176776035_176776163_176776368_176776430_176778106
ENSMUSG00000078875.11_176692749_176702019_1	chr2	+	486	4	FSM	ENSMUSG00000078875.11	ENSMUST00000156844.8	752	4	-21	287	0	148	multi-exon	FALSE	canonical	3	46	junction_2	49.7482551341139	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAACTGTTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	176692748	176702019	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_176692840_176696293_176696349_176701473_176701601_176701806
ENSMUSG00000078875.11_176692749_176702908_1	chr2	+	1375	4	FSM	ENSMUSG00000078875.11	ENSMUST00000156844.8	752	4	-21	-602	0	131	multi-exon	FALSE	canonical	3	46	junction_2	49.7482551341139	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGATTGCTCTGTTCAA	NA	False	NA	NA	False	NA	NA	NA	176692748	176702908	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_176692840_176696293_176696349_176701473_176701601_176701806
ENSMUSG00000078875.11_176692749_176703134_1	chr2	+	446	5	NIC	ENSMUSG00000078875.11	novel	683	5	NA	NA	0	357	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	44.7178655572915	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	176692748	176703134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_176692840_176696293_176696349_176701473_176701601_176701806_176701868_176703022
ENSMUSG00000078881.11_176166583_176178567_1	chr2	-	1299	4	FSM	ENSMUSG00000078881.11	ENSMUST00000120959.8	1458	4	-1	160	-1	-160	multi-exon	FALSE	canonical	3	26	junction_2	108.739239569818	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTCCCATTTCATATA	NA	False	NA	NA	False	NA	NA	NA	176178567	176166582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_176167595_176167799_176167927_176174950_176175006_176178462
ENSMUSG00000078886.13_175757124_175769021_1	chr2	+	1214	4	FSM	ENSMUSG00000078886.13	ENSMUST00000109007.8	1621	4	0	407	0	-407	multi-exon	FALSE	canonical	3	28	junction_2	114.545478595476	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGAGTTCTTCCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	175757123	175769021	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_175757228_175760682_175760738_175767761_175767889_175768093
ENSMUSG00000078887.11_175661079_175667283_1	chr2	+	2538	2	FSM	ENSMUSG00000078887.11	ENSMUST00000149549.2	570	2	0	-1968	0	1968	multi-exon	FALSE	canonical	3	82	junction_1	0	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTAAAGAGATTTCAC	NA	False	NA	NA	False	NA	NA	NA	175661078	175667283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_175661175_175664841
ENSMUSG00000078887.11_175661079_175670562_1	chr2	+	491	4	FSM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	67	887	0	-887	multi-exon	FALSE	canonical	3	65	junction_2	81.1432204329001	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAACTGTTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	175661078	175670562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349
ENSMUSG00000078887.11_175661079_175671458_1	chr2	+	1489	5	ISM	ENSMUSG00000078887.11	ENSMUST00000147820.2	599	6	41	226	0	9	5prime_fragment	FALSE	canonical	3	14	junction_2	92.1259328310981	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGCTCTGTTCAATGAAA	NA	False	NA	NA	False	NA	NA	NA	175661078	175671458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_175661175_175664841_175664897_175666200_175666303_175670021_175670149_175670349
ENSMUSG00000078898.10_175116859_175222725_1	chr2	+	418	3	Fusion	ENSMUSG00000078898.10_ENSMUSG00000078901.9	novel	3382	3	NA	NA	-59	-854	multi-exon	FALSE	canonical	3	17	junction_2	20	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGCTTTCAGTTATGGA	NA	False	NA	NA	False	NA	NA	NA	175116858	175222725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_+_175116997_175222239_175222367_175222572
ENSMUSG00000078901.9_175116918_175126404_1	chr2	+	1188	3	FSM	ENSMUSG00000078901.9	ENSMUST00000109051.8	3382	3	0	2194	0	917	multi-exon	FALSE	canonical	3	19	junction_2	45	421	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTATAAATGTGAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	175116917	175126404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_175116997_175125090_175125218_175125422
ENSMUSG00000078903.11_175033920_175048677_1	chr2	-	4608	5	FSM	ENSMUSG00000078903.11	ENSMUST00000109058.9	1854	5	33	-2787	-8	-1062	multi-exon	FALSE	canonical	3	35	junction_1	82.2936814099357	2566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175048677	175033919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ENSMUSG00000078903.11_175038238_175048677_2	chr2	-	1447	4	FSM	ENSMUSG00000078903.11	ENSMUST00000109055.2	965	4	15	-497	-8	497	multi-exon	FALSE	canonical	3	66	junction_2	81.8141525382715	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCATCAGTATAATCAGT	NA	False	NA	NA	False	NA	NA	NA	175048677	175038237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_175039399_175039599_175039727_175044851_175044907_175048573
ENSMUSG00000078903.11_175038387_175048677_2	chr2	-	1298	4	FSM	ENSMUSG00000078903.11	ENSMUST00000109055.2	965	4	15	-348	-8	348	multi-exon	FALSE	canonical	3	66	junction_2	81.8141525382715	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTCCCATTTCATATA	NA	False	NA	NA	False	NA	NA	NA	175048677	175038386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_175039399_175039599_175039727_175044851_175044907_175048573
ENSMUSG00000078903.11_175039186_175048677_2	chr2	-	499	4	FSM	ENSMUSG00000078903.11	ENSMUST00000109055.2	965	4	15	451	-8	281	multi-exon	FALSE	canonical	3	66	junction_2	81.8141525382715	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAACTGTTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	175048677	175039185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_175039399_175039599_175039727_175044851_175044907_175048573
ENSMUSG00000078906.10_174846494_174860063_1	chr2	+	357	4	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-5540	658	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	489.250674217443	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	174846493	174860063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_174846551_174858430_174858558_174858749_174858811_174859951
ENSMUSG00000078906.10_174846549_174859922_1	chr2	+	1645	5	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-5485	517	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	510.300401724318	3914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACGTGTGCCAATTT	NA	False	NA	NA	False	NA	NA	NA	174846548	174859922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_174846644_174854703_174854899_174855220_174855276_174858430_174858558_174858749
ENSMUSG00000078906.10_174846549_174860063_1	chr2	+	395	4	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-5485	658	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	491.960025476325	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	174846548	174860063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_174846644_174858430_174858558_174858749_174858811_174859951
ENSMUSG00000078906.10_174846549_174860063_2	chr2	+	450	5	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-5485	658	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	432.81231498191	1769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	174846548	174860063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_174846644_174855220_174855276_174858430_174858558_174858749_174858811_174859951
ENSMUSG00000078906.10_174852034_174859744_1	chr2	+	1258	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	0	-339	0	339	multi-exon	FALSE	canonical	3	233	junction_1	395.454450249611	1984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTTCCCATTTCATGT	NA	False	NA	NA	False	NA	NA	NA	174852033	174859744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749
ENSMUSG00000078906.10_174852034_174859862_1	chr2	+	1376	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	0	-457	0	457	multi-exon	FALSE	canonical	3	233	junction_1	395.454450249611	3938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATTTTAAAAGAATTCA	NA	False	NA	NA	False	NA	NA	NA	174852033	174859862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749
ENSMUSG00000078906.10_174852034_174860063_1	chr2	+	381	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109070.3	1281	4	-78	978	0	658	multi-exon	FALSE	canonical	3	436	junction_1	343.521307765456	4322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	174852033	174860063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_174852115_174858430_174858558_174858749_174858811_174859951
ENSMUSG00000078906.10_174852034_174860063_2	chr2	+	254	3	NIC	ENSMUSG00000078906.10	novel	1281	4	NA	NA	0	658	combination_of_known_splicesites	FALSE	canonical	3	70	junction_1	222.5	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	174852033	174860063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_174852115_174858749_174858811_174859951
ENSMUSG00000078906.10_174852034_174860063_3	chr2	+	436	5	NIC	ENSMUSG00000078906.10	novel	919	4	NA	NA	0	658	combination_of_known_junctions	FALSE	canonical	3	233	junction_1	354.600743795046	5564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	174852033	174860063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749_174858811_174859951
ENSMUSG00000078906.10_174855123_174860063_1	chr2	+	326	3	NIC	ENSMUSG00000078906.10	novel	919	4	NA	NA	3011	658	combination_of_known_splicesites	FALSE	canonical	3	113	junction_1	201	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	174855122	174860063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_174855276_174858749_174858811_174859951
ENSMUSG00000078919.11_168052201_168072284_2	chr2	-	992	9	NIC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	32	junction_2	140.419683449294	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	-19	True	AATAAA	-23	NA	168072284	168052200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_168052557_168053285_168053348_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ENSMUSG00000078919.11_168052201_168072284_3	chr2	-	1035	8	NNC	ENSMUSG00000078919.11	novel	722	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	161.63438207692	2428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	-19	True	AATAAA	-23	NA	168072284	168052200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059713_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ENSMUSG00000078919.11_168052201_168072284_4	chr2	-	976	8	NIC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	20	junction_2	153.11846820721	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	-19	True	AATAAA	-23	NA	168072284	168052200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_168052557_168053285_168053401_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ENSMUSG00000078919.11_168052201_168072284_5	chr2	-	1019	8	FSM	ENSMUSG00000078919.11	ENSMUST00000099072.11	722	8	-36	-261	-2	0	multi-exon	FALSE	canonical	2	6	junction_4	159.537469209063	1581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	-19	True	AATAAA	-23	NA	168072284	168052200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ENSMUSG00000078919.11_168052436_168072284_1	chr2	-	805	9	NNC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	152	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTCCCGTGTTCATTTC	NA	False	NA	-14	True	CATAAA	-16	NA	168072284	168052435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_168052557_168053290_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ENSMUSG00000078919.11_168052436_168072284_2	chr2	-	800	8	NNC	ENSMUSG00000078919.11	novel	722	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	161.63438207692	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTCCCGTGTTCATTTC	NA	False	NA	-14	True	CATAAA	-16	NA	168072284	168052435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059713_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ENSMUSG00000078919.11_168052436_168072284_3	chr2	-	757	9	NIC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	32	junction_2	140.419683449294	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTCCCGTGTTCATTTC	NA	False	NA	-14	True	CATAAA	-16	NA	168072284	168052435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_168052557_168053285_168053348_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ENSMUSG00000078919.11_168052436_168072284_4	chr2	-	741	8	NIC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	20	junction_2	153.11846820721	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTCCCGTGTTCATTTC	NA	False	NA	-14	True	CATAAA	-16	NA	168072284	168052435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_168052557_168053285_168053401_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ENSMUSG00000078923.11_167449764_167473899_1	chr2	-	1719	4	FSM	ENSMUSG00000078923.11	ENSMUST00000109207.10	2041	4	116	206	0	0	multi-exon	FALSE	canonical	3	2167	junction_3	78.0555357848927	4011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGTGGTTTTATTTTAA	9434	False	NA	NA	False	AATAAA	-22	NA	167473899	167449763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167473859
ENSMUSG00000078923.11_167450456_167473899_1	chr2	-	1027	4	FSM	ENSMUSG00000078923.11	ENSMUST00000109207.10	2041	4	116	898	0	230	multi-exon	FALSE	canonical	3	2167	junction_3	78.0555357848927	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCCGCGGGTGAGGAAT	9434	False	NA	NA	False	NA	NA	NA	167473899	167450455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167473859
ENSMUSG00000078923.11_167450855_167473899_1	chr2	-	628	4	FSM	ENSMUSG00000078923.11	ENSMUST00000109207.10	2041	4	116	1297	0	0	multi-exon	FALSE	canonical	3	2167	junction_3	78.0555357848927	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTTGTGCTGTGTAAC	9434	False	NA	NA	False	NA	NA	NA	167473899	167450854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167473859
ENSMUSG00000078941.10_100787870_100802867_1	chr13	+	915	5	FSM	ENSMUSG00000078941.10	ENSMUST00000022135.15	1298	5	383	0	0	0	multi-exon	FALSE	canonical	3	650	junction_4	426.823734110464	2942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACATCTCTTTAATAGTA	NA	False	NA	37	True	AATAAA	-14	NA	100787869	100802867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_100787954_100790698_100790792_100800402_100800462_100800558_100800705_100802334
ENSMUSG00000078952.10_97619209_97632576_1	chr13	+	1905	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	-939	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	70.6745278646337	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATGAATGTTTTGTCT	NA	False	NA	12	True	AAAAAG	-16	NA	97619208	97632576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_97619286_97619456_97619541_97629663_97629744_97630912
ENSMUSG00000078952.10_97619209_97633148_1	chr13	+	2972	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	-367	at_least_one_novel_splicesite	FALSE	canonical	3	166	junction_3	11.8602979164381	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGATGCAATGTCCTT	NA	False	NA	5	True	NA	NA	NA	97619208	97633148	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_97619286_97619456_97619541_97629663_97630239_97630912
ENSMUSG00000078952.10_97619209_97633148_2	chr13	+	2477	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	-367	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	70.6745278646337	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGATGCAATGTCCTT	NA	False	NA	5	True	NA	NA	NA	97619208	97633148	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_97619286_97619456_97619541_97629663_97629744_97630912
ENSMUSG00000078952.10_97619209_97633515_1	chr13	+	3339	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	166	junction_3	11.8602979164381	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619208	97633515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_97619286_97619456_97619541_97629663_97630239_97630912
ENSMUSG00000078952.10_97619209_97633515_2	chr13	+	2844	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	70.6745278646337	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619208	97633515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_97619286_97619456_97619541_97629663_97629744_97630912
ENSMUSG00000078954.10_84604284_84656405_2	chr15	+	1485	12	NIC	ENSMUSG00000078954.10	novel	1527	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	58.989143138924	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGGGGGTTTTGTGCTT	NA	False	NA	9	True	ATTAAA	-16	NA	84604283	84656405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_84604309_84617096_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ENSMUSG00000078954.10_84651030_84656405_1	chr15	+	929	3	ISM	ENSMUSG00000078954.10	ENSMUST00000168811.2	1464	11	33937	0	-3057	0	3prime_fragment	FALSE	canonical	3	209	junction_1	0.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGGGGGTTTTGTGCTT	NA	False	NA	9	True	ATTAAA	-16	NA	84651029	84656405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_+_84651431_84654197_84654302_84655981
ENSMUSG00000078970.6_17153198_17161568_1	chr11	+	1539	7	Genic_Genomic	ENSMUSG00000078970.6	novel	1550	13	NA	NA	-8720	-21346	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2964	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGCCAGCCTCCACCAAT	2059	False	NA	NA	False	NA	NA	NA	17153197	17161568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_17154002_17154500_17154572_17158788_17158902_17159076_17159138_17159310_17159395_17160987_17161138_17161312
ENSMUSG00000078974.11_16451651_16458166_2	chr11	-	427	4	FSM	ENSMUSG00000078974.11	ENSMUST00000109642.8	691	4	0	264	0	0	multi-exon	FALSE	canonical	3	167	junction_3	2857.39815605425	12128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCATAACAGACATTTAT	NA	False	NA	-51	True	AATAAA	-6	NA	16458166	16451650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458099
ENSMUSG00000079003.4_84725626_84727044_1	chr8	+	1152	4	ISM	ENSMUSG00000079003.4	ENSMUST00000095228.5	2265	5	1496	-6	573	6	3prime_fragment	FALSE	canonical	3	529	junction_1	19.7709101684492	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTTTCTGTATGGAGG	2564	False	NA	29	True	AATAAA	-16	NA	84725625	84727044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_84725870_84725952_84726050_84726144_84726257_84726345
ENSMUSG00000079003.4_84725765_84727038_1	chr8	+	1007	4	ISM	ENSMUSG00000079003.4	ENSMUST00000095228.5	2265	5	1635	0	712	0	3prime_fragment	FALSE	canonical	3	529	junction_1	19.7709101684492	454	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTCATTTTCTGTA	2703	False	NA	23	True	AATAAA	-10	NA	84725764	84727038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_84725870_84725952_84726050_84726144_84726257_84726345
ENSMUSG00000079008.3_150099437_150135966_1	chr2	+	658	5	NNC	ENSMUSG00000079008.3	novel	3018	4	NA	NA	0	23746	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	20.216020874544	85	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGACTATTCAGCTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	150099436	150135966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_150099549_150108044_150108172_150108370_150108432_150135188_150135267_150135686
ENSMUSG00000079009.9_150023675_150034208_1	chr2	+	737	4	FSM	ENSMUSG00000079009.9	ENSMUST00000109926.8	1728	4	0	991	0	-864	multi-exon	FALSE	canonical	3	34	junction_3	16.0485374896143	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAAAAACCCTT	NA	False	NA	NA	False	NA	NA	NA	150023674	150034208	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_150023791_150032312_150032440_150032638_150032700_150033775
ENSMUSG00000079009.9_150023675_150034312_1	chr2	+	841	4	FSM	ENSMUSG00000079009.9	ENSMUST00000109926.8	1728	4	0	887	0	-760	multi-exon	FALSE	canonical	3	34	junction_3	16.0485374896143	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGACCAGTGTGGTA	NA	False	NA	NA	False	NA	NA	NA	150023674	150034312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_150023791_150032312_150032440_150032638_150032700_150033775
ENSMUSG00000079012.12_104343728_104360515_2	chr12	+	1802	5	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9695	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	12.328828005938	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGCTCTCAGCTTGCA	659	False	NA	17	True	AATACA	-26	NA	104343727	104360515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_104343932_104355322_104355972_104357714_104357989_104358900_104359052_104359991
ENSMUSG00000079014.5_104229416_104234825_1	chr12	+	1085	5	NIC	ENSMUSG00000079014.5	novel	2200	6	NA	NA	0	-806	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	10.6624340560681	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGATAATTATCTCTGA	NA	False	NA	NA	False	AATATA	-14	NA	104229415	104234825	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_104229474_104230560_104230695_104231352_104231972_104233914_104234066_104234702
ENSMUSG00000079014.5_104229416_104234825_2	chr12	+	1359	6	FSM	ENSMUSG00000079014.5	ENSMUST00000109958.3	2200	6	35	806	0	-806	multi-exon	FALSE	canonical	0	0	junction_3	10.7256701422335	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGATAATTATCTCTGA	NA	False	NA	NA	False	AATATA	-14	NA	104229415	104234825	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_104229474_104230560_104230695_104231352_104231972_104232703_104232978_104233914_104234066_104234702
ENSMUSG00000079036.11_87474850_87484587_1	chr12	-	1807	4	NNC	ENSMUSG00000079036.11	novel	1883	6	NA	NA	742	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_3	115.494107593803	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87484587	87474849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_87476041_87478169_87478309_87480888_87480980_87484201
ENSMUSG00000079036.11_87474850_87484587_2	chr12	-	1862	4	NNC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	742	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_3	112.570965271789	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87484587	87474849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_87476041_87478169_87478364_87480888_87480980_87484201
ENSMUSG00000079036.11_87474850_87490609_1	chr12	-	2102	8	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_6	101.263245543283	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490609	87474849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
ENSMUSG00000079038.4_69723746_69754783_1	chr8	+	491	5	NIC	ENSMUSG00000079038.4	novel	2002	6	NA	NA	0	-1031	combination_of_known_splicesites	FALSE	canonical	2	14	junction_4	0.82915619758885	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTCACAGTAGTCTTT	7161	False	NA	NA	False	NA	NA	NA	69723745	69754783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_69723844_69743913_69743975_69752904_69753032_69753409_69753474_69754642
ENSMUSG00000079042.11_65481069_65489824_1	chr8	-	441	3	NNC	ENSMUSG00000079042.11	novel	945	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	214.5	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGAGTTTATTGTGTGT	NA	False	NA	-21	True	ATTAAA	-21	NA	65489824	65481068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_65481184_65488363_65488407_65489541
ENSMUSG00000079042.11_65481069_65489988_1	chr8	-	1112	3	FSM	ENSMUSG00000079042.11	ENSMUST00000124790.8	945	3	-164	-3	0	0	multi-exon	FALSE	canonical	3	429	junction_2	5	2543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGAGTTTATTGTGTGT	NA	False	NA	-21	True	ATTAAA	-21	NA	65489988	65481068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_65481644_65488316_65488407_65489541
ENSMUSG00000079043.4_130455760_130471947_1	chr2	-	2978	2	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAAAGTCTTACTGCAT	NA	False	NA	-5	True	AATAAA	-25	NA	130471947	130455759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_130458626_130471835
ENSMUSG00000079043.4_130455760_130471947_2	chr2	-	3125	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	92.5	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAAAGTCTTACTGCAT	NA	False	NA	-5	True	AATAAA	-25	NA	130471947	130455759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_130458626_130470408_130470556_130471835
ENSMUSG00000079104.5_57277232_57288954_1	chr12	+	3972	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	34	-2286	34	2286	multi-exon	FALSE	canonical	3	317	junction_1	0	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTATGTTTTGTTTGCT	NA	False	NA	16	True	ATTAAA	-20	NA	57277231	57288954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_57277398_57285148
ENSMUSG00000079104.5_57277277_57287057_1	chr12	+	2030	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	79	-389	79	389	multi-exon	FALSE	canonical	3	317	junction_1	0	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGTAAAGTTTGTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	57277276	57287057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_57277398_57285148
ENSMUSG00000079108.7_55277226_55288810_1	chr12	+	1059	4	ISM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	273	21811	273	-20995	5prime_fragment	FALSE	canonical	3	805	junction_1	77.2628989590447	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTCTGTGTC	NA	False	NA	NA	False	AATAAA	-22	NA	55277225	55288810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157
ENSMUSG00000079109.12_143846817_143868260_1	chr5	+	2916	15	FSM	ENSMUSG00000079109.12	ENSMUST00000170083.8	5477	15	35	2526	0	0	multi-exon	FALSE	canonical	2	18	junction_1	27.3439916170083	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCATGTCTGCAGTTAC	NA	False	NA	NA	False	AAAAAG	-17	NA	143846816	143868260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_143846898_143848743_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ENSMUSG00000079111.4_143389593_143406862_1	chr5	+	1035	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	0	794	0	-794	multi-exon	FALSE	canonical	3	606	junction_2	10.3531396204243	2059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGACAGTTTCCAAAAGT	NA	False	NA	6	True	AATAAA	-18	NA	143389592	143406862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
ENSMUSG00000079111.4_143389593_143406929_1	chr5	+	1102	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	0	727	0	-727	multi-exon	FALSE	canonical	3	606	junction_2	10.3531396204243	2093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGAGGTGGTCAATTC	NA	False	NA	73	True	NA	NA	NA	143389592	143406929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
ENSMUSG00000079165.11_137639596_137641161_1	chr5	+	1201	5	FSM	ENSMUSG00000079165.11	ENSMUST00000166099.3	1101	5	-103	3	0	0	multi-exon	FALSE	canonical	3	204	junction_4	13.4976849866931	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGTCTGCAGTGGGA	1101	False	NA	23	True	AATAAA	-15	NA	137639595	137641161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ENSMUSG00000079165.11_137639871_137641161_1	chr5	+	926	5	FSM	ENSMUSG00000079165.11	ENSMUST00000166099.3	1101	5	172	3	114	0	multi-exon	FALSE	canonical	3	204	junction_4	13.4976849866931	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGTCTGCAGTGGGA	1376	False	NA	23	True	AATAAA	-15	NA	137639870	137641161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ENSMUSG00000079179.10_3285504_3288274_1	chr12	+	870	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	0	3136	0	1	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAGGACAAATTTG	NA	False	NA	11	True	AATAAA	-20	NA	3285503	3288274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
ENSMUSG00000079179.10_3285504_3288274_2	chr12	+	808	4	NNC	ENSMUSG00000079179.10	novel	4006	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	68.3569065030496	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAGGACAAATTTG	NA	False	NA	11	True	AATAAA	-20	NA	3285503	3288274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_3285930_3287346_3287413_3287590_3287661_3288028
ENSMUSG00000079179.10_3285504_3288274_3	chr12	+	773	4	NNC	ENSMUSG00000079179.10	novel	4006	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	79.4411032708439	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAGGACAAATTTG	NA	False	NA	11	True	AATAAA	-20	NA	3285503	3288274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_3285930_3287346_3287413_3287590_3287661_3288063
ENSMUSG00000079179.10_3285791_3288274_1	chr12	+	583	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	287	3136	0	1	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAGGACAAATTTG	NA	False	NA	11	True	AATAAA	-20	NA	3285790	3288274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
ENSMUSG00000079184.11_56905705_56911434_1	chr14	+	560	3	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	0	23453	0	0	5prime_fragment	FALSE	canonical	3	870	junction_1	10.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAATAAAGTG	1778	False	NA	-37	True	NA	NA	NA	56905704	56911434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_+_56906022_56909861_56910018_56911347
ENSMUSG00000079184.11_56905705_56912058_1	chr14	+	1184	3	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	0	22829	0	624	5prime_fragment	FALSE	canonical	3	870	junction_1	10.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAAGAAACCAAGACAA	1778	False	NA	NA	False	NA	NA	NA	56905704	56912058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_+_56906022_56909861_56910018_56911347
ENSMUSG00000079184.11_56905705_56912134_1	chr14	+	1254	3	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	0	700	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	445.5	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGTTCCAGACTGAGT	1778	False	NA	-56	True	NA	NA	NA	56905704	56912134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_56906022_56909867_56910018_56911347
ENSMUSG00000079184.11_56905705_56912134_2	chr14	+	1260	3	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	0	22753	0	700	5prime_fragment	FALSE	canonical	3	870	junction_1	10.5	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGTTCCAGACTGAGT	1778	False	NA	-56	True	NA	NA	NA	56905704	56912134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr14_+_56906022_56909861_56910018_56911347
ENSMUSG00000079184.11_56905705_56934887_1	chr14	+	2932	14	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	242.51058660476	1194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1778	False	NA	32	True	ATTAAA	-18	NA	56905704	56934887	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_56906022_56909861_56910018_56911347_56912197_56913985_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ENSMUSG00000079197.11_55824904_55828410_1	chr14	-	814	10	NNC	ENSMUSG00000079197.11	novel	962	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	322.110747000676	3357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATATTACCTGTGTTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	55828410	55824903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55828273
ENSMUSG00000079197.11_55824904_55828410_2	chr14	-	822	11	FSM	ENSMUSG00000079197.11	ENSMUST00000161807.8	962	11	134	6	-5	0	multi-exon	FALSE	canonical	3	915	junction_9	61.4455856835949	3897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATATTACCTGTGTTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	55828410	55824903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828298
ENSMUSG00000079224.6_100581644_100582804_1	chr6	+	1035	2	Genic_Genomic	ENSMUSG00000079224.6	novel	438	1	NA	NA	0	723	multi-exon	FALSE	non_canonical	0	0	junction_1	0	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGTGCTATTTCTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	100581643	100582804	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_100581802_100581927
ENSMUSG00000079225.4_81559651_81560748_10	chr9	+	971	2	NNC	ENSMUSG00000079225.4	novel	638	2	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAGGACTGAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	81559650	81560748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_81560207_81560333
ENSMUSG00000079225.4_81559651_81560748_2	chr9	+	1043	2	NNC	ENSMUSG00000079225.4	novel	638	2	NA	NA	0	18	intron_retention	FALSE	canonical	0	0	junction_1	0	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAGGACTGAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	81559650	81560748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_81559812_81559866
ENSMUSG00000079225.4_81559651_81560748_3	chr9	+	805	2	NNC	ENSMUSG00000079225.4	novel	638	2	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	canonical	3	2674	junction_1	0	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAGGACTGAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	81559650	81560748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_81560062_81560354
ENSMUSG00000079225.4_81559651_81560748_4	chr9	+	810	2	NNC	ENSMUSG00000079225.4	novel	638	2	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAGGACTGAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	81559650	81560748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_81560348_81560635
ENSMUSG00000079225.4_81559651_81560748_5	chr9	+	1035	2	NNC	ENSMUSG00000079225.4	novel	638	2	NA	NA	0	18	intron_retention	FALSE	non_canonical	0	0	junction_1	0	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAGGACTGAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	81559650	81560748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_81559657_81559719
ENSMUSG00000079225.4_81559651_81560748_7	chr9	+	690	2	NNC	ENSMUSG00000079225.4	novel	638	2	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAGGACTGAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	81559650	81560748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_81559947_81560354
ENSMUSG00000079225.4_81559651_81560748_8	chr9	+	558	2	NNC	ENSMUSG00000079225.4	novel	638	2	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAGGACTGAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	81559650	81560748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_81560095_81560634
ENSMUSG00000079225.4_81559651_81560748_9	chr9	+	991	2	NNC	ENSMUSG00000079225.4	novel	638	2	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAGGACTGAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	81559650	81560748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_81560227_81560333
ENSMUSG00000079260.4_114230176_114236236_1	chr9	+	2810	2	FSM	ENSMUSG00000079260.4	ENSMUST00000111820.4	2921	2	3	108	3	-108	multi-exon	FALSE	canonical	3	40	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATGGAAAGACAGGACTG	NA	False	NA	NA	False	NA	NA	NA	114230175	114236236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_114230338_114233588
ENSMUSG00000079261.3_46620977_46628066_1	chr14	+	2004	4	NIC	ENSMUSG00000079261.3	novel	733	4	NA	NA	2393	7001	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTCCCTTCCTCCCC	NA	False	NA	NA	False	NA	NA	NA	46620976	46628066	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_46622170_46623171_46623552_46624612_46624738_46627760
ENSMUSG00000079316.11_165240249_165262644_1	chrX	-	1228	3	FSM	ENSMUSG00000079316.11	ENSMUST00000112091.9	1447	3	219	0	-2	0	multi-exon	FALSE	canonical	3	555	junction_2	7.5	4134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTTGCAATGCTTTTTAA	NA	False	NA	-8	True	ATTAAA	-24	NA	165262644	165240248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_165241340_165245310_165245339_165262535
ENSMUSG00000079316.11_165240249_165262644_2	chrX	-	1218	2	NNC	ENSMUSG00000079316.11	novel	1447	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTTGCAATGCTTTTTAA	NA	False	NA	-8	True	ATTAAA	-24	NA	165262644	165240248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_165241342_165262519
ENSMUSG00000079316.11_165240587_165262644_1	chrX	-	890	3	FSM	ENSMUSG00000079316.11	ENSMUST00000112091.9	1447	3	219	338	-2	159	multi-exon	FALSE	canonical	3	555	junction_2	7.5	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTGCCTCATTAGTCG	NA	False	NA	-1	True	AATAAA	-15	NA	165262644	165240586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_165241340_165245310_165245339_165262535
ENSMUSG00000079316.11_165241265_165262644_1	chrX	-	212	3	FSM	ENSMUSG00000079316.11	ENSMUST00000112091.9	1447	3	219	1016	-2	-134	multi-exon	FALSE	canonical	3	555	junction_2	7.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGAGTTGGCAAGAGTTC	NA	False	NA	NA	False	TTTAAA	-19	NA	165262644	165241264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_165241340_165245310_165245339_165262535
ENSMUSG00000079317.11_165223772_165235541_2	chrX	+	816	5	FSM	ENSMUSG00000079317.11	ENSMUST00000116495.8	1613	5	202	595	0	568	multi-exon	FALSE	canonical	0	0	junction_3	101.671038157383	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGACTGAAATGAGTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	165223771	165235541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_165223836_165229786_165229899_165232783_165232929_165233624_165233711_165235132
ENSMUSG00000079317.11_165223772_165235889_1	chrX	+	1164	5	FSM	ENSMUSG00000079317.11	ENSMUST00000116495.8	1613	5	202	247	0	-245	multi-exon	FALSE	canonical	0	0	junction_3	101.671038157383	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCACTTTACCTTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	165223771	165235889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_165223836_165229786_165229899_165232783_165232929_165233624_165233711_165235132
ENSMUSG00000079317.11_165223772_165236136_1	chrX	+	1411	5	FSM	ENSMUSG00000079317.11	ENSMUST00000116495.8	1613	5	202	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	101.671038157383	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTCATTTGATGCC	NA	False	NA	9	True	AATAAA	-14	NA	165223771	165236136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_165223836_165229786_165229899_165232783_165232929_165233624_165233711_165235132
ENSMUSG00000079317.11_165223772_165236136_2	chrX	+	1404	5	NNC	ENSMUSG00000079317.11	novel	1613	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	101.671038157383	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTCATTTGATGCC	NA	False	NA	9	True	AATAAA	-14	NA	165223771	165236136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_165223836_165229786_165229899_165232783_165232929_165233631_165233711_165235132
ENSMUSG00000079334.9_107457875_107461249_1	chr9	+	1494	2	FSM	ENSMUSG00000079334.9	ENSMUST00000093785.6	2053	2	559	0	559	0	multi-exon	FALSE	canonical	3	8	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACAGTTTATTGGTT	NA	False	NA	12	True	AATAAA	-18	NA	107457874	107461249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107458135_107460015
ENSMUSG00000079349.10_153836057_153846141_1	chrX	-	1644	4	FSM	ENSMUSG00000079349.10	ENSMUST00000069556.4	1360	4	0	-284	0	0	multi-exon	FALSE	canonical	3	37	junction_1	7.03957069398096	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTTTAGTTTCTTTTT	NA	False	NA	0	True	AATAAA	-18	NA	153846141	153836056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_153837456_153838390_153838480_153844474_153844576_153846086
ENSMUSG00000079349.10_153836057_153846141_2	chrX	-	1748	5	NNC	ENSMUSG00000079349.10	novel	1360	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	19.2272592950738	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTTTAGTTTCTTTTT	NA	False	NA	0	True	AATAAA	-18	NA	153846141	153836056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_153837456_153838390_153838480_153844474_153844576_153845292_153845397_153846086
ENSMUSG00000079357.10_8508486_8520749_1	chr14	-	935	8	NIC	ENSMUSG00000079357.10	novel	3635	5	NA	NA	16120	10145	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2792	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTAAACAGTCATGGAGGA	NA	False	NA	NA	False	NA	NA	NA	8520749	8508485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUSG00000079357.10_8508486_8520749_2	chr14	-	1107	9	NIC	ENSMUSG00000079357.10	novel	3635	5	NA	NA	16120	10145	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	589	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTAAACAGTCATGGAGGA	NA	False	NA	NA	False	NA	NA	NA	8520749	8508485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_8508579_8512131_8512304_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUSG00000079357.10_8508486_8520749_3	chr14	-	1013	9	NIC	ENSMUSG00000079357.10	novel	3635	5	NA	NA	16120	10145	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1990	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTAAACAGTCATGGAGGA	NA	False	NA	NA	False	NA	NA	NA	8520749	8508485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_8508579_8512131_8512210_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUSG00000079357.10_8508486_8520749_4	chr14	-	908	8	NIC	ENSMUSG00000079357.10	novel	3635	5	NA	NA	16120	10145	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	796	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTAAACAGTCATGGAGGA	NA	False	NA	NA	False	NA	NA	NA	8520749	8508485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_8508579_8515106_8515198_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUSG00000079357.10_8508551_8520749_1	chr14	-	843	8	NIC	ENSMUSG00000079357.10	novel	3635	5	NA	NA	16120	10080	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCGGCGGCGGCCGAGC	NA	False	NA	NA	False	NA	NA	NA	8520749	8508550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_8508579_8515106_8515198_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUSG00000079357.10_8508551_8520749_2	chr14	-	870	8	NIC	ENSMUSG00000079357.10	novel	3635	5	NA	NA	16120	10080	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1952	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCGGCGGCGGCCGAGC	NA	False	NA	NA	False	NA	NA	NA	8520749	8508550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUSG00000079357.10_8508551_8520749_3	chr14	-	948	9	NIC	ENSMUSG00000079357.10	novel	3635	5	NA	NA	16120	10080	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	431	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCGGCGGCGGCCGAGC	NA	False	NA	NA	False	NA	NA	NA	8520749	8508550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_8508579_8512131_8512210_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUSG00000079357.10_8508551_8520749_4	chr14	-	1042	9	NIC	ENSMUSG00000079357.10	novel	3635	5	NA	NA	16120	10080	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	570	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCGGCGGCGGCCGAGC	NA	False	NA	NA	False	NA	NA	NA	8520749	8508550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_8508579_8512131_8512304_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUSG00000079426.14_113355108_113366143_1	chr6	+	972	6	FSM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	32	1266	0	0	multi-exon	FALSE	canonical	3	688	junction_1	248.294985853521	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGGGCGGGCCTGG	NA	False	NA	112	True	NA	NA	NA	113355107	113366143	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
ENSMUSG00000079426.14_113355154_113366020_1	chr6	+	803	6	FSM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	78	1389	0	44	multi-exon	FALSE	canonical	3	688	junction_1	248.294985853521	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGCTTGTAGAAGACT	NA	False	NA	-11	True	TTTAAA	-17	NA	113355153	113366020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
ENSMUSG00000079426.14_113355154_113366614_1	chr6	+	1384	6	NNC	ENSMUSG00000079426.14	novel	2270	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	522.364087586427	5048	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTGCTCTGTGTGGGT	NA	False	NA	39	True	ATTAAA	-31	NA	113355153	113366614	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362609_113365731
ENSMUSG00000079427.11_88570659_88601623_1	chr9	-	724	3	NIC	ENSMUSG00000079427.11	novel	725	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	156	junction_2	185.5	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAGAAATCAATAGAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	88601623	88570658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_88571039_88597540_88597803_88601541
ENSMUSG00000079427.11_88570659_88601866_1	chr9	-	867	4	NIC	ENSMUSG00000079427.11	novel	725	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	226.851395313222	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAGAAATCAATAGAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	88601866	88570658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_88571039_88597540_88597803_88598546_88598617_88601711
ENSMUSG00000079428.9_135114722_135116206_1	chrX	+	793	3	NNC	ENSMUSG00000079428.9	novel	453	4	NA	NA	-806	-9930	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	30962	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGAGGGCAGGTCCGAGA	NA	False	NA	NA	False	NA	NA	NA	135114721	135116206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_135115333_135115668_135115730_135116085
ENSMUSG00000079428.9_135114722_135116206_2	chrX	+	767	3	NIC	ENSMUSG00000079428.9	novel	453	4	NA	NA	-806	-9930	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	22806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGAGGGCAGGTCCGAGA	NA	False	NA	NA	False	NA	NA	NA	135114721	135116206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_135115333_135115694_135115730_135116085
ENSMUSG00000079432.2_134068212_134078381_1	chrX	-	3859	5	FSM	ENSMUSG00000079432.2	ENSMUST00000113183.2	3698	5	0	-161	0	161	multi-exon	FALSE	canonical	3	86	junction_3	56.4933624419719	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134078381	134068211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_134070935_134071511_134072097_134073399_134073700_134077932_134078052_134078249
ENSMUSG00000079435.10_133486403_133488745_1	chrX	+	416	5	NNC	ENSMUSG00000079435.10	novel	483	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5556.20547226252	69395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTTTGATTGCAGTTG	NA	False	NA	15	True	AATAAA	-14	NA	133486402	133488745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_133486469_133486826_133486933_133487259_133487328_133488199_133488323_133488692
ENSMUSG00000079435.10_133486439_133488805_1	chrX	+	440	5	NNC	ENSMUSG00000079435.10	novel	483	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5556.20547226252	132491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTTTTTCTCCTGTT	NA	False	NA	75	True	ATTAAA	-16	NA	133486438	133488805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_133486469_133486826_133486933_133487259_133487328_133488199_133488323_133488692
ENSMUSG00000079445.4_86231253_86235027_1	chr1	+	2285	2	FSM	ENSMUSG00000079445.4	ENSMUST00000113306.4	2582	2	297	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	0	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGCTTCCTTGGTCTT	NA	False	NA	36	True	AATAAA	-27	NA	86231252	86235027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_86231277_86232766
ENSMUSG00000079471.5_45911897_45912896_1	chr17	-	903	2	FSM	ENSMUSG00000079471.5	ENSMUST00000169137.3	616	2	-4	-283	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	1499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTGGTGGCTTTTGT	NA	False	NA	-5	True	AATAAA	-20	NA	45912896	45911896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45912612_45912708
ENSMUSG00000079471.5_45911897_45912896_2	chr17	-	819	2	FSM	ENSMUSG00000079471.5	ENSMUST00000208801.2	437	2	0	-382	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTGGTGGCTTTTGT	NA	False	NA	-5	True	AATAAA	-20	NA	45912896	45911896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45912612_45912792
ENSMUSG00000079477.10_87976088_88022214_1	chr6	-	2114	6	NNC	ENSMUSG00000079477.10	novel	2159	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_1	736.820086588307	2792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTGTCTTTTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	88022214	87976087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_87977506_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
ENSMUSG00000079477.10_87976425_88022214_1	chr6	-	1784	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113600.10	2159	6	38	337	-1	0	multi-exon	FALSE	canonical	3	1571	junction_1	157.281403859452	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCACTATCCTACTC	NA	False	NA	36	True	NA	NA	NA	88022214	87976424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
ENSMUSG00000079477.10_87976787_88022214_1	chr6	-	1422	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113600.10	2159	6	38	699	-1	0	multi-exon	FALSE	canonical	3	1571	junction_1	157.281403859452	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTGGATTGTGTGTTT	NA	False	NA	0	True	ATTAAA	-21	NA	88022214	87976786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
ENSMUSG00000079484.13_30156831_30169538_1	chr2	+	679	8	NIC	ENSMUSG00000079484.13	novel	751	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_7	22.4844617549134	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTATGTATATGTGT	NA	False	NA	NA	False	NA	NA	NA	30156830	30169538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169406
ENSMUSG00000079484.13_30156831_30169538_2	chr2	+	801	8	NNC	ENSMUSG00000079484.13	novel	751	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	30.9627821351864	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTATGTATATGTGT	NA	False	NA	NA	False	NA	NA	NA	30156830	30169538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167512_30167657_30169406
ENSMUSG00000079484.13_30156831_30169538_3	chr2	+	677	8	NIC	ENSMUSG00000079484.13	novel	751	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	30.5834422322849	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTATGTATATGTGT	NA	False	NA	NA	False	NA	NA	NA	30156830	30169538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_30156954_30159700_30159864_30164487_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169406
ENSMUSG00000079484.13_30156831_30172160_1	chr2	+	1297	11	NIC	ENSMUSG00000079484.13	novel	1678	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	23.5391163810369	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATATGTACGGGTACTT	NA	False	NA	NA	False	AATAAA	-17	NA	30156830	30172160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_30156954_30159700_30159864_30164487_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
ENSMUSG00000079484.13_30156831_30172160_2	chr2	+	1299	11	ISM	ENSMUSG00000079484.13	ENSMUST00000113645.8	1325	12	98	0	0	0	3prime_fragment	FALSE	canonical	2	39	junction_2	15.9185426468631	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATATGTACGGGTACTT	NA	False	NA	NA	False	AATAAA	-17	NA	30156830	30172160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
ENSMUSG00000079508.9_93410723_93456273_1	chrX	+	806	8	ISM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	0	4294	0	-4294	5prime_fragment	FALSE	canonical	3	325	junction_1	49.0588983794386	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGGCTCATGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	93410722	93456273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065
ENSMUSG00000079508.9_93410723_93460699_1	chrX	+	916	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	0	-132	0	0	multi-exon	FALSE	canonical	3	325	junction_1	51.8975854447969	2304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTGCTTTCTTTACT	NA	False	NA	NA	False	ATTAAA	-18	NA	93410722	93460699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
ENSMUSG00000079511.9_83086101_83086920_1	chr6	+	725	2	NIC	ENSMUSG00000030037.10	novel	695	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	747	junction_1	0	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	7463	False	NA	NA	False	ATTAAA	-19	NA	83086100	83086920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_83086408_83086502
ENSMUSG00000079511.9_83086101_83086920_2	chr6	+	606	3	NNC	ENSMUSG00000030037.10	novel	695	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	373.5	1526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	7463	False	NA	NA	False	ATTAAA	-19	NA	83086100	83086920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_83086176_83086294_83086408_83086502
ENSMUSG00000079523.9_72934336_72935121_1	chr6	-	526	2	FSM	ENSMUSG00000079523.9	ENSMUST00000114049.2	690	2	164	0	164	0	multi-exon	FALSE	canonical	3	26814	junction_1	0	39372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGGCGTGGTCTGAAT	NA	False	NA	-17	True	AATAAA	-14	NA	72935121	72934335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72934636_72934895
ENSMUSG00000079536.2_73523723_73525122_1	chrX	-	830	3	NNC	ENSMUSG00000079536.2	novel	627	3	NA	NA	-117	170	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11	181	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCATCTGATTTTACTT	NA	False	NA	NA	False	AATAAA	-13	NA	73525122	73523722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_73523967_73524226_73524343_73524652
ENSMUSG00000079553.12_34094642_34109580_1	chr17	-	2291	11	NNC	ENSMUSG00000079553.12	novel	2260	12	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_4	174.497249261987	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTCTTGTTTGTTT	9748	False	NA	-16	True	AATAAA	-17	NA	34109580	34094641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101416_34102068_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ENSMUSG00000079562.8_33492905_33529893_1	chr5	+	1394	9	FSM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	52	747	0	0	multi-exon	FALSE	canonical	3	507	junction_4	39.7106723690244	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGCGTTTGATTGGTA	NA	False	NA	NA	False	AAAAAG	-31	NA	33492904	33529893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ENSMUSG00000079577.2_66738443_66750635_1	chrX	+	1619	9	NNC	ENSMUSG00000079577.2	novel	782	8	NA	NA	-861	679	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	9.9365172470036	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGAAATATGTCAATTAAA	NA	False	NA	NA	False	AATAAA	-23	NA	66738442	66750635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_66738557_66739259_66739413_66739880_66739951_66740099_66740135_66741912_66742031_66742916_66743017_66743790_66743890_66749598_66749704_66749810
ENSMUSG00000079578.2_66725831_66738047_1	chrX	-	1631	9	NNC	ENSMUSG00000079578.2	novel	782	8	NA	NA	-879	675	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_8	9.82264602843857	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACTTGAAATATGTCAAT	NA	False	NA	NA	False	AATAAA	-19	NA	66738047	66725830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_66726652_66726758_66726864_66732572_66732672_66733445_66733546_66734431_66734550_66736337_66736373_66736521_66736592_66737059_66737213_66737917
ENSMUSG00000079584.3_56454514_56534133_1	chrX	+	2001	15	NNC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	211.8629827728	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTGTCTGGCCTCAGT	NA	False	NA	15	True	TATAAA	-8	NA	56454513	56534133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_56454734_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468741_56478571_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
ENSMUSG00000079584.3_56454514_56534133_2	chrX	+	438	4	NNC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	268.731588516621	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTGTCTGGCCTCAGT	NA	False	NA	15	True	TATAAA	-8	NA	56454513	56534133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_56454734_56459619_56459688_56461126_56461164_56534020
ENSMUSG00000079584.3_56454514_56534133_3	chrX	+	2095	16	NNC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	205.655850607	2306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTGTCTGGCCTCAGT	NA	False	NA	15	True	TATAAA	-8	NA	56454513	56534133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_56454734_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468741_56478571_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
ENSMUSG00000079608.11_70585284_70605551_1	chr18	+	3491	8	NIC	ENSMUSG00000079608.11	novel	1496	9	NA	NA	-20241	-10954	intron_retention	FALSE	non_canonical	0	0	junction_1	0	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCCGGGCCGCAGGGCGC	4221	False	NA	NA	False	NA	NA	NA	70585283	70605551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70601589_70602519_70602849_70604743_70605051_70605361
ENSMUSG00000079608.11_70585284_70605551_2	chr18	+	2923	9	NIC	ENSMUSG00000079608.11	novel	1496	9	NA	NA	-20241	-10954	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCCGGGCCGCAGGGCGC	4221	False	NA	NA	False	NA	NA	NA	70585283	70605551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70601124_70601589_70602519_70602849_70604743_70605051_70605361
ENSMUSG00000079610.10_36577175_36586300_1	chr1	-	1883	4	FSM	ENSMUSG00000079610.10	ENSMUST00000001172.12	2109	4	226	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	11.5566238822398	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATGTGTGGCGCTAAT	7026	False	NA	77	True	NA	NA	NA	36586300	36577174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36586166
ENSMUSG00000079610.10_36578109_36586300_2	chr1	-	949	4	FSM	ENSMUSG00000079610.10	ENSMUST00000001172.12	2109	4	226	934	0	332	multi-exon	FALSE	canonical	3	48	junction_3	11.5566238822398	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGGGGGCAGGTTTCT	7026	False	NA	NA	False	AATAAA	-19	NA	36586300	36578108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36586166
ENSMUSG00000079610.10_36578220_36586300_1	chr1	-	838	4	FSM	ENSMUSG00000079610.10	ENSMUST00000001172.12	2109	4	226	1045	0	221	multi-exon	FALSE	canonical	3	48	junction_3	11.5566238822398	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACATGGGCAAAGATAAAT	7026	False	NA	-8	True	AATAAA	-19	NA	36586300	36578219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36586166
ENSMUSG00000079610.10_36578220_36586300_2	chr1	-	1014	4	FSM	ENSMUSG00000079610.10	ENSMUST00000207843.2	2646	4	0	1632	0	221	multi-exon	FALSE	canonical	3	9	junction_3	29.9369708257569	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACATGGGCAAAGATAAAT	7026	False	NA	-8	True	AATAAA	-19	NA	36586300	36578219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36585990
ENSMUSG00000079614.5_67908045_67926672_1	chr18	+	1337	8	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	0	1009	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	657.954343679975	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGTGGTAATGTGT	NA	False	NA	10	True	AATAAA	-16	NA	67908044	67926672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921840_67924933_67925085_67926219
ENSMUSG00000079614.5_67908045_67926672_2	chr18	+	1558	9	FSM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	99	1885	0	1009	multi-exon	FALSE	canonical	3	1509	junction_8	173.331285043987	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGTGGTAATGTGT	NA	False	NA	10	True	AATAAA	-16	NA	67908044	67926672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ENSMUSG00000079614.5_67908045_67926672_3	chr18	+	1553	9	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	0	1009	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	623.632854731051	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGTGGTAATGTGT	NA	False	NA	10	True	AATAAA	-16	NA	67908044	67926672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922414_67922568_67924933_67925085_67926219
ENSMUSG00000079614.5_67908045_67928424_1	chr18	+	3310	9	FSM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	99	133	0	-133	multi-exon	FALSE	canonical	3	1509	junction_8	173.331285043987	1785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAAGGATATTTTTGTCT	NA	False	NA	13	True	AATAAA	-26	NA	67908044	67928424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ENSMUSG00000079614.5_67908045_67928557_1	chr18	+	3443	9	FSM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	99	0	0	0	multi-exon	FALSE	canonical	3	1509	junction_8	173.331285043987	1956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTGTCTTATAAAAAAG	NA	False	NA	19	True	AATAAA	-21	NA	67908044	67928557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ENSMUSG00000079627.3_36850642_36854945_1	chrX	-	390	3	NIC	ENSMUSG00000079627.3	novel	779	4	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	14.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTGCTTCTTCTG	9214	False	NA	NA	False	AATAAA	-20	NA	36854945	36850641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_36850876_36852672_36852719_36854835
ENSMUSG00000079629.6_36820768_36825123_1	chrX	-	959	3	ISM	ENSMUSG00000079629.6	ENSMUST00000115169.4	795	4	0	-2	0	0	intron_retention	FALSE	canonical	2	5	junction_2	5.5	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATATTTGTTTTGTGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	36825123	36820767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_-_36820996_36822809_36822856_36824438
ENSMUSG00000079638.9_36593720_36598461_1	chrX	+	963	3	NIC	ENSMUSG00000079638.9	novel	799	4	NA	NA	0	2	intron_retention	FALSE	canonical	3	16	junction_2	18.5	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTTGTGCTTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	36593719	36598461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_36594405_36595944_36595991_36598229
ENSMUSG00000079641.4_36346173_36348838_1	chrX	-	395	3	FSM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	217	0	-19	0	multi-exon	FALSE	canonical	3	12849	junction_1	35	263592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGACCCGATAAGGCTTC	NA	False	NA	-5	True	TATAAA	-17	NA	36348838	36346172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_36346403_36347637_36347742_36348777
ENSMUSG00000079641.4_36346173_36348893_1	chrX	-	450	3	FSM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	162	0	-74	0	multi-exon	FALSE	canonical	3	12849	junction_1	35	267111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGACCCGATAAGGCTTC	NA	False	NA	-5	True	TATAAA	-17	NA	36348893	36346172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_36346403_36347637_36347742_36348777
ENSMUSG00000079658.10_16712991_16727108_1	chr1	-	972	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	0	1042	0	0	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	5198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGTGTTTTGTTTATT	NA	False	NA	-2	True	TATAAA	-20	NA	16727108	16712990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
ENSMUSG00000079658.10_16713366_16727266_1	chr1	-	585	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	0	375	0	0	multi-exon	FALSE	canonical	3	1066	junction_3	717.825574603995	7258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAGTTGAAATTTGTTT	NA	False	NA	-82	True	NA	NA	NA	16727266	16713365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
ENSMUSG00000079658.10_16713415_16727108_1	chr1	-	548	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	0	1466	0	0	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	3379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGCTGTAAAGCTAATT	NA	False	NA	52	True	NA	NA	NA	16727108	16713414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
ENSMUSG00000079658.10_16713415_16727266_1	chr1	-	536	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	0	424	0	0	multi-exon	FALSE	canonical	3	1066	junction_3	717.825574603995	7240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGCTGTAAAGCTAATT	NA	False	NA	52	True	NA	NA	NA	16727266	16713414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
ENSMUSG00000079658.10_16713415_16727266_2	chr1	-	616	4	FSM	ENSMUSG00000079658.10	ENSMUST00000186948.7	641	4	-24	49	0	0	multi-exon	FALSE	canonical	3	147	junction_3	1146.38165062465	6219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGCTGTAAAGCTAATT	NA	False	NA	52	True	NA	NA	NA	16727266	16713414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727135
ENSMUSG00000079659.6_9168868_9211737_1	chr5	+	3577	17	NIC	ENSMUSG00000079659.6	novel	1040	5	NA	NA	5620	751	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACGGAGCCGCGAGGCC	6981	False	NA	NA	False	NA	NA	NA	9168867	9211737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9200375_9200493_9201797_9201919_9211613
ENSMUSG00000079659.6_9168868_9211737_2	chr5	+	3490	17	NIC	ENSMUSG00000079659.6	novel	1040	5	NA	NA	5620	751	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACGGAGCCGCGAGGCC	6981	False	NA	NA	False	NA	NA	NA	9168867	9211737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ENSMUSG00000079671.9_9618280_9646963_1	chr1	-	1859	13	NIC	ENSMUSG00000079671.9	novel	662	4	NA	NA	54354	12777	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCAATCCGGTCGCTG	NA	False	NA	NA	False	NA	NA	NA	9646963	9618279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_9618377_9620131_9620170_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
ENSMUSG00000079710.11_15230438_15242495_1	chr17	-	1468	12	NIC	ENSMUSG00000079710.11	novel	752	4	NA	NA	-12051	-2259	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTCTTCCCCGGCTTCC	NA	False	NA	NA	False	NA	NA	NA	15242495	15230437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239734_15240527_15240597_15242176
ENSMUSG00000079845.9_72117951_72126116_1	chrX	-	1158	9	NIC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	103.290548938419	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	72126116	72117950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125626_72125674_72125988
ENSMUSG00000079845.9_72117951_72126116_2	chrX	-	1218	9	NNC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_8	86.1506674379253	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	72126116	72117950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125590_72125674_72125964
ENSMUSG00000080268.5_5091427_5099940_2	chr19	+	1459	10	NIC	ENSMUSG00000080268.5	novel	1388	10	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	76.2029454082248	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGGCTGATGTGT	2775	False	NA	3	True	AATAAA	-14	NA	5091426	5099940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_5091640_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
ENSMUSG00000080709.2_177292130_177451666_1	chr2	+	1556	4	NNC	ENSMUSG00000080709.2	novel	3051	3	NA	NA	-83963	71116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	506	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGCCGGGCAATGATGG	NA	False	NA	NA	False	CATAAA	-5	NA	177292129	177451666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_177292231_177376092_177376220_177376411_177376473_177450399
ENSMUSG00000080717.11_97798534_97832638_1	chr16	+	487	4	NIC	ENSMUSG00000080717.11	novel	546	5	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	57.6945982451275	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTCTTAGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	97798533	97832638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_97798637_97809828_97809956_97810143_97810205_97832442
ENSMUSG00000080727.3_95791270_95798083_1	chr3	+	708	6	Genic_Genomic	ENSMUSG00000080727.3	novel	1723	4	NA	NA	12427	1678	multi-exon	TRUE	non_canonical	0	0	junction_1	0	491	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCAAACTACTCTTGGGA	NA	False	NA	NA	False	AAAACA	-34	NA	95791269	95798083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_95791550_95792281_95792384_95795452_95795609_95796168_95796228_95797034_95797122_95798059
ENSMUSG00000080727.3_95791270_95799267_1	chr3	+	755	6	Genic_Genomic	ENSMUSG00000080727.3	novel	1723	4	NA	NA	12427	2862	multi-exon	FALSE	non_canonical	0	0	junction_1	0	574	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTTAAAAGAGGAAATTGC	NA	False	NA	NA	False	TATAAA	-38	NA	95791269	95799267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_95791550_95792281_95792384_95795452_95795609_95796168_95796228_95797034_95797122_95799196
ENSMUSG00000080848.4_115869661_115870172_1	chr9	-	259	2	Genic_Genomic	ENSMUSG00000080848.4	novel	472	1	NA	NA	-40	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGGTAGAGCAGAGTT	NA	False	NA	-63	True	NA	NA	NA	115870172	115869660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_-_115869663_115869915
ENSMUSG00000080888.4_174919703_174933194_1	chr2	+	3660	4	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8591	1483	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.24264068711928	751	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	174919702	174933194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_174919826_174928293_174928421_174928631_174928693_174929845
ENSMUSG00000080977.2_90634456_90634994_1	chr2	-	316	2	Genic_Genomic	ENSMUSG00000080977.2	novel	317	1	NA	NA	-74	148	multi-exon	FALSE	non_canonical	0	0	junction_1	0	498	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTACGGTCTTTATTAA	1875	False	NA	NA	False	AGTAAA	-17	NA	90634994	90634455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_90634685_90634907
ENSMUSG00000081133.3_37029485_37034566_1	chrX	-	2410	2	NNC	ENSMUSG00000081133.3	novel	451	3	NA	NA	-87	208	intron_retention	TRUE	canonical	2	7	junction_1	0	54	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTCAATTGCCCTC	NA	False	NA	NA	False	AATAAA	-14	NA	37034566	37029484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_37031443_37034114
ENSMUSG00000081251.2_45719937_45720873_1	chr11	+	898	2	Genic_Genomic	ENSMUSG00000081251.2	novel	551	1	NA	NA	-209	177	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAAATTATTTTAGTGG	NA	False	NA	NA	False	AATAAA	-31	NA	45719936	45720873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_45720301_45720339
ENSMUSG00000081355.2_94520066_94665453_2	chr3	-	2594	13	Fusion	ENSMUSG00000081355.2_ENSMUSG00000005968.15	novel	2555	12	NA	NA	-30	0	multi-exon	FALSE	non_canonical	2	2	junction_11	35.2950854306312	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCCCCGTGGGTCTTT	NA	False	NA	-7	True	AATAAA	-14	NA	94665453	94520065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94629191_94629282_94630124_94630212_94640266_94640369_94640735_94640811_94665341
ENSMUSG00000081355.2_94520066_94665453_3	chr3	-	2519	12	Fusion	ENSMUSG00000081355.2_ENSMUSG00000005968.15	novel	2555	12	NA	NA	-30	0	multi-exon	FALSE	non_canonical	3	14	junction_10	28.4119634911332	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCCCCGTGGGTCTTT	NA	False	NA	-7	True	AATAAA	-14	NA	94665453	94520065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94629191_94629282_94630124_94630212_94640266_94640369_94665341
ENSMUSG00000081406.5_75021417_75022198_1	chr2	-	494	2	Genic_Genomic	ENSMUSG00000081406.5	novel	750	1	NA	NA	-32	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTTTAAGAGCAACAAATA	NA	False	NA	NA	False	NA	NA	NA	75022198	75021416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_75021687_75021974
ENSMUSG00000081406.5_75021417_75022198_2	chr2	-	640	2	Genic_Genomic	ENSMUSG00000081406.5	novel	750	1	NA	NA	-32	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1976	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTTTAAGAGCAACAAATA	NA	False	NA	NA	False	NA	NA	NA	75022198	75021416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_75021847_75021988
ENSMUSG00000081406.5_75021417_75022198_3	chr2	-	703	2	Genic_Genomic	ENSMUSG00000081406.5	novel	750	1	NA	NA	-32	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTTTAAGAGCAACAAATA	NA	False	NA	NA	False	NA	NA	NA	75022198	75021416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_75021685_75021763
ENSMUSG00000081434.4_152195535_152196553_1	chr2	+	196	2	Genic_Genomic	ENSMUSG00000081434.4	novel	952	1	NA	NA	0	67	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	152195534	152196553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_+_152195608_152196430
ENSMUSG00000081434.4_152195535_152196553_2	chr2	+	254	2	Genic_Genomic	ENSMUSG00000081434.4	novel	952	1	NA	NA	0	67	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	152195534	152196553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_+_152195642_152196406
ENSMUSG00000081434.4_152195535_152196553_3	chr2	+	194	2	Genic_Genomic	ENSMUSG00000081434.4	novel	952	1	NA	NA	0	67	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	152195534	152196553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_+_152195611_152196435
ENSMUSG00000081434.4_152195535_152196553_4	chr2	+	258	2	Genic_Genomic	ENSMUSG00000081434.4	novel	952	1	NA	NA	0	67	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	152195534	152196553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_+_152195652_152196412
ENSMUSG00000081534.4_97682309_97689687_1	chr15	+	1577	3	FSM	ENSMUSG00000081534.4	ENSMUST00000117892.2	2536	3	73	886	0	559	multi-exon	FALSE	canonical	3	145	junction_2	1	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGGGTGTTTCTTTGG	NA	False	NA	12	True	AATACA	-17	NA	97682308	97689687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_97682498_97687783_97687952_97688467
ENSMUSG00000081999.4_41877138_41878878_1	chr2	-	1031	2	NNC	ENSMUSG00000081999.4	novel	662	2	NA	NA	-37	347	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	864	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	41878878	41877137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_41878015_41878724
ENSMUSG00000081999.4_41877138_41878878_2	chr2	-	1038	2	NNC	ENSMUSG00000081999.4	novel	662	2	NA	NA	-37	347	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	776	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	41878878	41877137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_41878022_41878724
ENSMUSG00000081999.4_41877138_41878878_3	chr2	-	1032	2	NNC	ENSMUSG00000081999.4	novel	662	2	NA	NA	-37	347	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	884	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	41878878	41877137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_41878022_41878730
ENSMUSG00000081999.4_41877138_41878878_4	chr2	-	1034	2	NNC	ENSMUSG00000081999.4	novel	662	2	NA	NA	-37	347	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	883	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	41878878	41877137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_41878011_41878717
ENSMUSG00000081999.4_41877138_41878878_5	chr2	-	1022	2	NNC	ENSMUSG00000081999.4	novel	662	2	NA	NA	-37	347	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	821	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	41878878	41877137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_41878022_41878740
ENSMUSG00000082062.2_125397871_125398818_1	chr4	+	750	2	Genic_Genomic	ENSMUSG00000082062.2	novel	552	1	NA	NA	-210	186	multi-exon	FALSE	canonical	0	0	junction_1	0	4455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGCAGAAGGAAAAAAAA	NA	False	NA	NA	False	AATAAA	-40	NA	125397870	125398818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_125398352_125398549
ENSMUSG00000082062.2_125397871_125398818_2	chr4	+	919	2	Genic_Genomic	ENSMUSG00000082062.2	novel	552	1	NA	NA	-210	186	multi-exon	FALSE	non_canonical	0	0	junction_1	0	78862	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGCAGAAGGAAAAAAAA	NA	False	NA	NA	False	AATAAA	-40	NA	125397870	125398818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_125398516_125398544
ENSMUSG00000082062.2_125397871_125398818_3	chr4	+	646	2	Genic_Genomic	ENSMUSG00000082062.2	novel	552	1	NA	NA	-210	186	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGCAGAAGGAAAAAAAA	NA	False	NA	NA	False	AATAAA	-40	NA	125397870	125398818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_125398178_125398479
ENSMUSG00000082062.2_125397871_125398818_4	chr4	+	539	2	Genic_Genomic	ENSMUSG00000082062.2	novel	552	1	NA	NA	-210	186	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6536	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGCAGAAGGAAAAAAAA	NA	False	NA	NA	False	AATAAA	-40	NA	125397870	125398818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_125398185_125398593
ENSMUSG00000082062.2_125397871_125398818_6	chr4	+	540	2	Genic_Genomic	ENSMUSG00000082062.2	novel	552	1	NA	NA	-210	186	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGCAGAAGGAAAAAAAA	NA	False	NA	NA	False	AATAAA	-40	NA	125397870	125398818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_125398178_125398585
ENSMUSG00000082082.2_145159007_145178235_1	chr4	+	2177	3	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	375	3	NA	NA	-14303	777	multi-exon	FALSE	non_canonical	0	0	junction_2	29.5	3038	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	21	True	NA	NA	NA	145159006	145178235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_145159152_145176036_145176318_145176484
ENSMUSG00000082082.2_145159007_145178235_2	chr4	+	2398	3	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	1575	3	NA	NA	-14303	777	multi-exon	FALSE	non_canonical	0	0	junction_1	48.5	3587	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	21	True	NA	NA	NA	145159006	145178235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_145159152_145173287_145173342_145176036
ENSMUSG00000082765.4_176817871_176821178_2	chr2	-	414	4	NNC	ENSMUSG00000082765.4	novel	914	3	NA	NA	-1676	-615	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	41.3843770844345	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	176821178	176817870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_176817983_176819124_176819186_176819376_176819504_176821064
ENSMUSG00000083022.2_6122644_6123064_1	chr11	-	341	2	Genic_Genomic	ENSMUSG00000083022.2	novel	393	1	NA	NA	-28	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGTAAAGCATAAATAAAAA	NA	False	NA	-51	True	AAAACA	-35	NA	6123064	6122643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_-_6122824_6122903
ENSMUSG00000083396.2_140470689_140472176_1	chr7	+	1304	2	Genic_Genomic	ENSMUSG00000083396.2	novel	1194	1	NA	NA	-111	183	multi-exon	FALSE	non_canonical	0	0	junction_1	0	528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCAGTCCATTATCAT	NA	False	NA	NA	False	NA	NA	NA	140470688	140472176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_140471571_140471754
ENSMUSG00000083396.2_140470689_140472176_2	chr7	+	1256	2	Genic_Genomic	ENSMUSG00000083396.2	novel	1194	1	NA	NA	-111	183	multi-exon	FALSE	non_canonical	0	0	junction_1	0	566	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCAGTCCATTATCAT	NA	False	NA	NA	False	NA	NA	NA	140470688	140472176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_140470803_140471034
ENSMUSG00000083669.6_29664495_29665077_1	chr7	-	412	2	Genic_Genomic	ENSMUSG00000083669.6	novel	348	1	NA	NA	-87	148	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1008	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGTGTGGACATAACCC	NA	False	NA	NA	False	AATAAA	-42	NA	29665077	29664494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_29664734_29664904
ENSMUSG00000083773.5_28823414_28824694_1	chr2	-	1111	2	Genic_Genomic	ENSMUSG00000083773.5	novel	1000	1	NA	NA	-73	208	multi-exon	FALSE	canonical	1	1	junction_1	0	12199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCTTAGCTGGGCATG	NA	False	NA	NA	False	AATAAA	-42	NA	28824694	28823413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_28824332_28824501
ENSMUSG00000083773.5_28823414_28824694_10	chr2	-	1024	2	Genic_Genomic	ENSMUSG00000083773.5	novel	1000	1	NA	NA	-73	208	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCTTAGCTGGGCATG	NA	False	NA	NA	False	AATAAA	-42	NA	28824694	28823413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_28824276_28824532
ENSMUSG00000083773.5_28823414_28824694_2	chr2	-	788	2	Genic_Genomic	ENSMUSG00000083773.5	novel	1000	1	NA	NA	-73	208	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCTTAGCTGGGCATG	NA	False	NA	NA	False	AATAAA	-42	NA	28824694	28823413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_28823710_28824202
ENSMUSG00000083773.5_28823414_28824694_3	chr2	-	1225	2	Genic_Genomic	ENSMUSG00000083773.5	novel	1000	1	NA	NA	-73	208	multi-exon	TRUE	non_canonical	0	0	junction_1	0	27537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCTTAGCTGGGCATG	NA	False	NA	NA	False	AATAAA	-42	NA	28824694	28823413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_28824013_28824068
ENSMUSG00000083773.5_28823414_28824694_4	chr2	-	1119	2	Genic_Genomic	ENSMUSG00000083773.5	novel	1000	1	NA	NA	-73	208	multi-exon	FALSE	canonical	0	0	junction_1	0	12545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCTTAGCTGGGCATG	NA	False	NA	NA	False	AATAAA	-42	NA	28824694	28823413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_28824337_28824498
ENSMUSG00000083773.5_28823414_28824694_5	chr2	-	1145	2	Genic_Genomic	ENSMUSG00000083773.5	novel	1000	1	NA	NA	-73	208	multi-exon	FALSE	canonical	0	0	junction_1	0	12807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCTTAGCTGGGCATG	NA	False	NA	NA	False	AATAAA	-42	NA	28824694	28823413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_28824349_28824484
ENSMUSG00000083773.5_28823414_28824694_6	chr2	-	1152	2	Genic_Genomic	ENSMUSG00000083773.5	novel	1000	1	NA	NA	-73	208	multi-exon	FALSE	canonical	2	100	junction_1	0	11467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCTTAGCTGGGCATG	NA	False	NA	NA	False	AATAAA	-42	NA	28824694	28823413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_28824484_28824612
ENSMUSG00000083773.5_28823414_28824694_7	chr2	-	1209	2	Genic_Genomic	ENSMUSG00000083773.5	novel	1000	1	NA	NA	-73	208	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCTTAGCTGGGCATG	NA	False	NA	NA	False	AATAAA	-42	NA	28824694	28823413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_28823491_28823562
ENSMUSG00000083773.5_28823414_28824694_8	chr2	-	1116	2	Genic_Genomic	ENSMUSG00000083773.5	novel	1000	1	NA	NA	-73	208	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCTTAGCTGGGCATG	NA	False	NA	NA	False	AATAAA	-42	NA	28824694	28823413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_28824332_28824496
ENSMUSG00000083773.5_28823414_28824694_9	chr2	-	1017	2	Genic_Genomic	ENSMUSG00000083773.5	novel	1000	1	NA	NA	-73	208	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCTTAGCTGGGCATG	NA	False	NA	NA	False	AATAAA	-42	NA	28824694	28823413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_28824257_28824520
ENSMUSG00000083899.3_77185252_77187252_1	chr11	+	1797	2	NNC	ENSMUSG00000083899.3	novel	2255	2	NA	NA	982	528	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	588	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGTTGCAGGTGGCCA	NA	False	NA	NA	False	GATAAA	-37	NA	77185251	77187252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_77185693_77185896
ENSMUSG00000083992.2_86521254_86521889_1	chr11	-	305	2	Genic_Genomic	ENSMUSG00000083992.2	novel	599	1	NA	NA	-37	0	multi-exon	FALSE	canonical	0	0	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAATAAAGACTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	86521889	86521253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_-_86521416_86521746
ENSMUSG00000084102.3_13848735_13870883_2	chr7	-	474	3	NNC	ENSMUSG00000084102.3	novel	428	3	NA	NA	4046	20612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTAAGTCAAGTTTCGG	NA	False	NA	NA	False	NA	NA	NA	13870883	13848734	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_13848948_13869337_13869405_13870689
ENSMUSG00000084106.5_86836515_86837426_1	chr1	-	625	2	Genic_Genomic	ENSMUSG00000084106.5	novel	891	1	NA	NA	-21	0	multi-exon	FALSE	canonical	1	18	junction_1	0	1817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTTAACCTAATTAAACA	NA	False	NA	NA	False	NA	NA	NA	86837426	86836514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_-_86836834_86837120
ENSMUSG00000084106.5_86836515_86837426_2	chr1	-	773	2	Genic_Genomic	ENSMUSG00000084106.5	novel	891	1	NA	NA	-21	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTTAACCTAATTAAACA	NA	False	NA	NA	False	NA	NA	NA	86837426	86836514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_-_86836668_86836806
ENSMUSG00000084106.5_86836515_86837426_3	chr1	-	774	2	Genic_Genomic	ENSMUSG00000084106.5	novel	891	1	NA	NA	-21	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTTAACCTAATTAAACA	NA	False	NA	NA	False	NA	NA	NA	86837426	86836514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_-_86836678_86836815
ENSMUSG00000084111.5_92288153_92288825_1	chr5	-	268	2	Genic_Genomic	ENSMUSG00000084111.5	novel	636	1	NA	NA	-37	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGGAGAGTTGCA	NA	False	NA	NA	False	AAAAAG	-44	NA	92288825	92288152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_92288346_92288750
ENSMUSG00000084111.5_92288153_92288825_2	chr5	-	285	2	Genic_Genomic	ENSMUSG00000084111.5	novel	636	1	NA	NA	-37	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGGAGAGTTGCA	NA	False	NA	NA	False	AAAAAG	-44	NA	92288825	92288152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_92288332_92288719
ENSMUSG00000084111.5_92288153_92288825_3	chr5	-	531	2	Genic_Genomic	ENSMUSG00000084111.5	novel	636	1	NA	NA	-37	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGGAGAGTTGCA	NA	False	NA	NA	False	AAAAAG	-44	NA	92288825	92288152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_92288544_92288685
ENSMUSG00000084111.5_92288153_92288825_4	chr5	-	457	2	Genic_Genomic	ENSMUSG00000084111.5	novel	636	1	NA	NA	-37	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGGAGAGTTGCA	NA	False	NA	NA	False	AAAAAG	-44	NA	92288825	92288152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_92288528_92288743
ENSMUSG00000084111.5_92288153_92288825_5	chr5	-	556	2	Genic_Genomic	ENSMUSG00000084111.5	novel	636	1	NA	NA	-37	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGGAGAGTTGCA	NA	False	NA	NA	False	AAAAAG	-44	NA	92288825	92288152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_92288441_92288557
ENSMUSG00000084111.5_92288153_92288825_6	chr5	-	450	2	Genic_Genomic	ENSMUSG00000084111.5	novel	636	1	NA	NA	-37	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGGAGAGTTGCA	NA	False	NA	NA	False	AAAAAG	-44	NA	92288825	92288152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_92288528_92288750
ENSMUSG00000084291.4_146544078_146552100_1	chr6	-	857	5	Fusion	ENSMUSG00000040234.17_ENSMUSG00000084291.4	novel	552	4	NA	NA	-3014	4661	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3496	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGAGCGCGAGCGATTG	NA	False	NA	NA	False	NA	NA	NA	146552100	146544077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr6_-_146544151_146548703_146548780_146549662_146549778_146550647_146550749_146551608
ENSMUSG00000084314.2_150931570_150946350_1	chr4	+	488	2	Genic_Genomic	ENSMUSG00000084314.2	novel	395	1	NA	NA	0	14386	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2883	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGATGTTGGCAGTTGAA	1836	False	NA	NA	False	NA	NA	NA	150931569	150946350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_150932018_150946310
ENSMUSG00000084762.2_135488444_135493987_1	chr2	+	499	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	58.1969835033474	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488443	135493987	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_135488613_135490846_135490892_135493417_135493482_135493766
ENSMUSG00000084762.2_135488444_135493987_2	chr2	+	525	6	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	289.531621761769	4321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488443	135493987	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_135488469_135488964_135489065_135490846_135490892_135491052_135491123_135493417_135493482_135493766
ENSMUSG00000084762.2_135488444_135493987_3	chr2	+	529	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	4	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	239.888906579692	2093	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488443	135493987	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_135488613_135490846_135490892_135491052_135491123_135493417_135493442_135493766
ENSMUSG00000084762.2_135490827_135493987_1	chr2	+	406	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	289.483831826389	4061	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135490826	135493987	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_135490892_135491052_135491123_135493417_135493478_135493776
ENSMUSG00000084769.2_23812646_23845236_1	chr11	+	3730	22	Genic_Genomic	ENSMUSG00000084769.2	novel	479	3	NA	NA	-31914	-252	multi-exon	FALSE	non_canonical	0	0	junction_1	0	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGGCGCTACTTCCCAG	NA	False	NA	NA	False	AATACA	-15	NA	23812645	23845236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ENSMUSG00000084786.10_20556117_20558073_1	chr9	+	570	4	FSM	ENSMUSG00000084786.10	ENSMUST00000154429.9	2511	4	1943	-2	0	0	multi-exon	FALSE	canonical	3	1046	junction_3	4.78423336480244	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGCTGTCATACTTGT	NA	False	NA	18	True	AATAAA	-15	NA	20556116	20558073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_20556190_20556488_20556786_20556917_20556956_20557911
ENSMUSG00000084786.10_20556117_20558073_2	chr9	+	408	4	NNC	ENSMUSG00000084786.10	novel	489	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	532.355770764877	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGCTGTCATACTTGT	NA	False	NA	18	True	AATAAA	-15	NA	20556116	20558073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_20556190_20556488_20556556_20556701_20556786_20557889
ENSMUSG00000084786.10_20556117_20558073_3	chr9	+	444	5	FSM	ENSMUSG00000084786.10	ENSMUST00000161486.8	794	5	-13	363	0	0	multi-exon	FALSE	canonical	3	14	junction_3	472.738828530088	5263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGCTGTCATACTTGT	NA	False	NA	18	True	AATAAA	-15	NA	20556116	20558073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556897_20556956_20557911
ENSMUSG00000084786.10_20556117_20558073_4	chr9	+	418	5	NNC	ENSMUSG00000084786.10	novel	489	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	479.825684493859	4967	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGCTGTCATACTTGT	NA	False	NA	18	True	AATAAA	-15	NA	20556116	20558073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_20556190_20556494_20556556_20556701_20556786_20556917_20556956_20557911
ENSMUSG00000084799.8_63182755_63215849_1	chr1	+	2687	19	Genic_Genomic	ENSMUSG00000084799.8	novel	1576	4	NA	NA	28856	18400	multi-exon	FALSE	non_canonical	0	0	junction_1	0	686	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCGACCTGGAGGACGG	4284	False	NA	NA	False	NA	NA	NA	63182754	63215849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215586
ENSMUSG00000084799.8_63182755_63215849_2	chr1	+	2633	20	Genic_Genomic	ENSMUSG00000084799.8	novel	1576	4	NA	NA	28856	18400	multi-exon	FALSE	non_canonical	0	0	junction_1	0	852	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCGACCTGGAGGACGG	4284	False	NA	NA	False	NA	NA	NA	63182754	63215849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215744
ENSMUSG00000084799.8_63182755_63215849_3	chr1	+	2791	20	Genic_Genomic	ENSMUSG00000084799.8	novel	1576	4	NA	NA	28856	18400	multi-exon	FALSE	non_canonical	0	0	junction_1	0	906	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCGACCTGGAGGACGG	4284	False	NA	NA	False	NA	NA	NA	63182754	63215849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215586
ENSMUSG00000084799.8_63182755_63215981_2	chr1	+	2923	20	Genic_Genomic	ENSMUSG00000084799.8	novel	1576	4	NA	NA	28856	18532	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTCCGCCGGAAGTAGC	4284	False	NA	NA	False	NA	NA	NA	63182754	63215981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215586
ENSMUSG00000084799.8_63182755_63215981_3	chr1	+	2765	20	Genic_Genomic	ENSMUSG00000084799.8	novel	1576	4	NA	NA	28856	18532	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTCCGCCGGAAGTAGC	4284	False	NA	NA	False	NA	NA	NA	63182754	63215981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215744
ENSMUSG00000084803.9_155493647_155506451_1	chr4	-	2435	5	NIC	ENSMUSG00000084803.9	novel	2757	5	NA	NA	-290	328	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTAGCGGGCGGGGCTGA	NA	False	NA	NA	False	NA	NA	NA	155506451	155493646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_155494028_155500136_155500223_155503076_155503153_155503303_155503448_155504703
ENSMUSG00000084835.2_98328534_98329817_1	chr11	+	741	4	Fusion	ENSMUSG00000062312.6_ENSMUSG00000084835.2	novel	760	2	NA	NA	-329	-55	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTCACGTGGGGGGCG	2226	False	NA	NA	False	NA	NA	NA	98328533	98329817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr11_+_98328972_98329062_98329129_98329467_98329571_98329683
ENSMUSG00000084835.2_98328534_98329817_3	chr11	+	741	4	Fusion	ENSMUSG00000062312.6_ENSMUSG00000084835.2	novel	760	2	NA	NA	-329	-55	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2424	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTCACGTGGGGGGCG	2226	False	NA	NA	False	NA	NA	NA	98328533	98329817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr11_+_98328972_98329062_98329140_98329472_98329571_98329689
ENSMUSG00000084862.2_26145401_26160913_1	chr17	+	3058	11	Genic_Genomic	ENSMUSG00000084862.2	novel	2071	2	NA	NA	7338	6194	multi-exon	FALSE	non_canonical	0	0	junction_1	0	983	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGCCGGCTCCGCGGCG	6685	False	NA	NA	False	NA	NA	NA	26145400	26160913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_+_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ENSMUSG00000084862.2_26146412_26160913_1	chr17	+	2047	11	Genic_Genomic	ENSMUSG00000084862.2	novel	2071	2	NA	NA	8349	6194	multi-exon	FALSE	non_canonical	0	0	junction_1	0	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGCCGGCTCCGCGGCG	7696	False	NA	NA	False	NA	NA	NA	26146411	26160913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_+_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ENSMUSG00000084864.2_78783968_78796251_1	chr15	-	2514	18	NIC	ENSMUSG00000084864.2	novel	458	2	NA	NA	1609	12198	intron_retention	FALSE	non_canonical	0	0	junction_1	0	481	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGTGCTGGCGCTGGCG	8120	False	NA	NA	False	NA	NA	NA	78796251	78783967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ENSMUSG00000084936.2_97052358_97078476_1	chr11	+	3845	22	NIC	ENSMUSG00000084936.2	novel	466	2	NA	NA	542	25975	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2879	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGGATGGGGGTTGGG	1490	False	NA	NA	False	NA	NA	NA	97052357	97078476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ENSMUSG00000084936.2_97052358_97078766_1	chr11	+	4135	22	NIC	ENSMUSG00000084936.2	novel	466	2	NA	NA	542	26265	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	3066	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGAGGGAGGGAGGCGG	1490	False	NA	NA	False	NA	NA	NA	97052357	97078766	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ENSMUSG00000084950.8_87976088_88022214_1	chr6	+	2121	6	Genic_Genomic	ENSMUSG00000084950.8	novel	815	3	NA	NA	17423	39761	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCCGCCGCCCCGAGCGG	NA	False	NA	NA	False	NA	NA	NA	87976087	88022214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
ENSMUSG00000084950.8_87976088_88022214_2	chr6	+	2111	6	Genic_Genomic	ENSMUSG00000084950.8	novel	815	3	NA	NA	17423	39761	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1467	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCCGCCGCCCCGAGCGG	NA	False	NA	NA	False	NA	NA	NA	87976087	88022214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_87977513_87981152_87981282_87981974_87982194_87989288_87989406_87990619_87990681_88022054
ENSMUSG00000084950.8_87976088_88022214_3	chr6	+	2208	7	Genic_Genomic	ENSMUSG00000084950.8	novel	815	3	NA	NA	17423	39761	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCCGCCGCCCCGAGCGG	NA	False	NA	NA	False	NA	NA	NA	87976087	88022214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_87992613_87992701_88022054
ENSMUSG00000084950.8_87976425_88022214_1	chr6	+	1871	7	Genic_Genomic	ENSMUSG00000084950.8	novel	815	3	NA	NA	17760	39761	multi-exon	FALSE	non_canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCCGCCGCCCCGAGCGG	NA	False	NA	NA	False	NA	NA	NA	87976424	88022214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_87992613_87992701_88022054
ENSMUSG00000084950.8_87976787_88022214_1	chr6	+	1509	7	Genic_Genomic	ENSMUSG00000084950.8	novel	815	3	NA	NA	18122	39761	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCCGCCGCCCCGAGCGG	NA	False	NA	NA	False	NA	NA	NA	87976786	88022214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_87992613_87992701_88022054
ENSMUSG00000084957.4_53919441_53932909_1	chr19	-	1006	4	FSM	ENSMUSG00000084957.4	ENSMUST00000236370.2	662	4	-250	-94	0	0	multi-exon	FALSE	canonical	3	94	junction_3	45.8427263102398	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGGGCTTGTACACTAC	NA	False	NA	NA	False	AATAAA	-17	NA	53932909	53919440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932586
ENSMUSG00000084968.2_108436651_108450256_1	chr4	-	526	4	NNC	ENSMUSG00000084968.2	novel	3700	4	NA	NA	26790	12971	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGCACAGGAGAAAACTT	1110	False	NA	NA	False	NA	NA	NA	108450256	108436650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_108436773_108445872_108445979_108447849_108447975_108450083
ENSMUSG00000084968.2_108436651_108471771_1	chr4	-	2755	17	NIC	ENSMUSG00000084968.2	novel	3700	4	NA	NA	5275	12971	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	667	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGCACAGGAGAAAACTT	NA	False	NA	NA	False	NA	NA	NA	108471771	108436650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ENSMUSG00000084968.2_108436651_108471880_1	chr4	-	2864	17	NIC	ENSMUSG00000084968.2	novel	3700	4	NA	NA	5166	12971	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	976	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGCACAGGAGAAAACTT	NA	False	NA	NA	False	NA	NA	NA	108471880	108436650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_-_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ENSMUSG00000084974.2_26932448_26957370_1	chr7	-	2176	15	NIC	ENSMUSG00000084974.2	novel	2130	2	NA	NA	-13	16240	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAACGTCCGCACACCCGC	NA	False	NA	NA	False	NA	NA	NA	26957370	26932447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_26932599_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ENSMUSG00000084990.2_36078424_36080697_1	chrX	+	879	2	FSM	ENSMUSG00000084990.2	ENSMUST00000154993.2	1035	2	0	156	0	-156	multi-exon	FALSE	non_canonical	0	0	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGGATGAAGAGACTGGGG	NA	False	NA	NA	False	NA	NA	NA	36078423	36080697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36078984_36080378
ENSMUSG00000084998.2_36203569_36207995_1	chr17	+	1176	6	NIC	ENSMUSG00000084998.2	novel	2945	5	NA	NA	-4269	-15112	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCGGCGGGGGCCTCTGC	NA	False	NA	NA	False	NA	NA	NA	36203568	36207995	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207871
ENSMUSG00000084998.2_36221271_36227241_1	chr17	+	1034	7	NNC	ENSMUSG00000084998.2	novel	2945	5	NA	NA	13433	4134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3509	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGCAGCCATCTTGAC	NA	False	NA	NA	False	NA	NA	NA	36221270	36227241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_36221849_36222315_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
ENSMUSG00000084998.2_36221271_36227241_2	chr17	+	1034	7	NNC	ENSMUSG00000084998.2	novel	2945	5	NA	NA	13433	4134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGCAGCCATCTTGAC	NA	False	NA	NA	False	NA	NA	NA	36221270	36227241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225388_36225482_36225587_36225697_36227183
ENSMUSG00000084998.2_36221271_36227241_3	chr17	+	1030	7	NNC	ENSMUSG00000084998.2	novel	2945	5	NA	NA	13433	4134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	995	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGCAGCCATCTTGAC	NA	False	NA	NA	False	NA	NA	NA	36221270	36227241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_36221849_36222310_36222371_36223229_36223288_36225225_36225295_36225383_36225482_36225587_36225697_36227183
ENSMUSG00000084998.2_36221271_36227241_4	chr17	+	1027	7	NNC	ENSMUSG00000084998.2	novel	2945	5	NA	NA	13433	4134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1321	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGCAGCCATCTTGAC	NA	False	NA	NA	False	NA	NA	NA	36221270	36227241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225685_36227183
ENSMUSG00000084998.2_36221271_36227241_5	chr17	+	1033	7	NNC	ENSMUSG00000084998.2	novel	2945	5	NA	NA	13433	4134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1966	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGCAGCCATCTTGAC	NA	False	NA	NA	False	NA	NA	NA	36221270	36227241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_36221839_36222306_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
ENSMUSG00000084998.2_36221271_36227292_1	chr17	+	1081	7	NNC	ENSMUSG00000084998.2	novel	2945	5	NA	NA	13433	4185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5343	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCGCATGCTCGGGACA	NA	False	NA	NA	False	NA	NA	NA	36221270	36227292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227192
ENSMUSG00000084998.2_36221271_36227292_2	chr17	+	1145	8	NNC	ENSMUSG00000084998.2	novel	2945	5	NA	NA	13433	4185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5676	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCGCATGCTCGGGACA	NA	False	NA	NA	False	NA	NA	NA	36221270	36227292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_36221849_36222310_36222371_36223229_36223297_36224763_36224819_36225225_36225295_36225383_36225482_36225587_36225697_36227183
ENSMUSG00000084998.2_36221271_36227292_3	chr17	+	1021	6	NIC	ENSMUSG00000084998.2	novel	2945	5	NA	NA	13433	4185	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCGCATGCTCGGGACA	NA	False	NA	NA	False	NA	NA	NA	36221270	36227292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_36221849_36222310_36222371_36223229_36223297_36225383_36225482_36225587_36225697_36227183
ENSMUSG00000084998.2_36221271_36227292_4	chr17	+	772	8	NNC	ENSMUSG00000084998.2	novel	2945	5	NA	NA	13433	4185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCGCATGCTCGGGACA	NA	False	NA	NA	False	NA	NA	NA	36221270	36227292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_36221359_36221676_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
ENSMUSG00000085033.2_105927726_105945951_1	chr11	-	1523	7	Genic_Genomic	ENSMUSG00000085033.2	novel	397	2	NA	NA	-3273	14251	multi-exon	FALSE	non_canonical	0	0	junction_1	0	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCCCGCCCTCTCGGAA	9899	False	NA	NA	False	NA	NA	NA	105945951	105927725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_-_105928088_105937516_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
ENSMUSG00000085039.3_3632991_3644228_1	chr7	-	1873	14	Genic_Genomic	ENSMUSG00000085039.3	novel	1788	5	NA	NA	2021	2122	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1865	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTTACTTGCCGCCGAT	NA	False	NA	NA	False	AAGAAA	-33	NA	3644228	3632990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637867_3639211_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ENSMUSG00000085072.2_115294583_115301745_1	chr11	-	689	5	NIC	ENSMUSG00000085072.2	novel	1052	2	NA	NA	-2605	2829	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCGGTGCTCACTCTTCC	NA	False	NA	NA	False	NA	NA	NA	115301745	115294582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_115294700_115297376_115297414_115300885_115300969_115301057_115301228_115301463
ENSMUSG00000085072.2_115294583_115301745_2	chr11	-	776	5	NIC	ENSMUSG00000085072.2	novel	1052	2	NA	NA	-2605	2829	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCGGTGCTCACTCTTCC	NA	False	NA	NA	False	NA	NA	NA	115301745	115294582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_115294787_115297376_115297414_115300885_115300969_115301057_115301228_115301463
ENSMUSG00000085072.2_115294583_115301745_3	chr11	-	830	6	NNC	ENSMUSG00000085072.2	novel	1052	2	NA	NA	-2605	2829	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2815	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCGGTGCTCACTCTTCC	NA	False	NA	NA	False	NA	NA	NA	115301745	115294582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_115294787_115297376_115297418_115300315_115300366_115300885_115300969_115301057_115301228_115301463
ENSMUSG00000085085.3_128943890_128951776_1	chr4	-	1146	3	NNC	ENSMUSG00000085085.3	novel	1009	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	2	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCCTTATGACTTACAC	NA	False	NA	-18	True	AATAAA	-16	NA	128951776	128943889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_128944703_128944860_128944998_128951580
ENSMUSG00000085101.8_145138756_145176326_1	chr4	+	454	3	NNC	ENSMUSG00000085101.8	novel	545	3	NA	NA	1920	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	32	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTCATACAGGAGAGAA	NA	False	NA	67	True	NA	NA	NA	145138755	145176326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_145138851_145160315_145160385_145176036
ENSMUSG00000085105.3_33933802_33936157_1	chr7	+	700	2	FSM	ENSMUSG00000085105.3	ENSMUST00000127010.2	4175	2	0	3475	0	1180	multi-exon	FALSE	canonical	3	45	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGTTATTTTACTTATA	NA	False	NA	NA	False	AATAAA	-1	NA	33933801	33936157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_33933921_33935576
ENSMUSG00000085105.3_33936139_33944586_1	chr7	+	3103	5	NIC	ENSMUSG00000085105.3	novel	4175	2	NA	NA	2273	4954	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGAGACAGACCCGCTG	NA	False	NA	NA	False	NA	NA	NA	33936138	33944586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390
ENSMUSG00000085111.4_85774501_85793687_1	chr10	+	1175	10	Genic_Genomic	ENSMUSG00000085111.4	novel	483	3	NA	NA	9863	11617	multi-exon	FALSE	non_canonical	0	0	junction_1	0	140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGGGAAGATGGCAAGC	NA	False	NA	NA	False	NA	NA	NA	85774500	85793687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr10_+_85774531_85779222_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
ENSMUSG00000085111.4_85774501_85793687_2	chr10	+	2004	12	Genic_Genomic	ENSMUSG00000085111.4	novel	483	3	NA	NA	9863	11617	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3483	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGGGAAGATGGCAAGC	NA	False	NA	NA	False	NA	NA	NA	85774500	85793687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr10_+_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779683_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
ENSMUSG00000085118.3_120442054_120502728_1	chr7	-	2635	18	Genic_Genomic	ENSMUSG00000085118.3	novel	2176	3	NA	NA	-28207	22678	multi-exon	FALSE	non_canonical	0	0	junction_1	0	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCACGGGGCGCACGCCC	NA	False	NA	NA	False	NA	NA	NA	120502728	120442053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ENSMUSG00000085118.3_120442054_120503224_1	chr7	-	3131	18	Genic_Genomic	ENSMUSG00000085118.3	novel	2176	3	NA	NA	-28703	22678	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCACGGGGCGCACGCCC	NA	False	NA	NA	False	NA	NA	NA	120503224	120442053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ENSMUSG00000085148.2_75352470_75357502_1	chr11	+	1647	3	FSM	ENSMUSG00000085148.2	ENSMUST00000149940.2	1752	3	105	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	6.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAAAATTTTTACTCT	3943	False	NA	8	True	AATAAA	-19	NA	75352469	75357502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_75352582_75354518_75354684_75356132
ENSMUSG00000085152.2_88883712_88887370_1	chr11	-	735	2	FSM	ENSMUSG00000085152.2	ENSMUST00000128078.2	581	2	0	-154	0	154	multi-exon	FALSE	canonical	3	19	junction_1	0	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGATTTTTAATTTGTT	9039	False	NA	NA	False	NA	NA	NA	88887370	88883711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_88884304_88887227
ENSMUSG00000085156.9_6475591_6478587_1	chr11	-	419	4	FSM	ENSMUSG00000085156.9	ENSMUST00000147762.9	611	4	192	0	176	0	multi-exon	FALSE	canonical	3	436	junction_3	5.24933858267454	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	-1	True	NA	NA	NA	6478587	6475590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6475818_6476354_6476438_6478305_6478375_6478547
ENSMUSG00000085156.9_6475591_6478766_1	chr11	-	516	4	NNC	ENSMUSG00000085156.9	novel	611	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	196.105980417619	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	-1	True	NA	NA	NA	6478766	6475590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_6475818_6476354_6476438_6478305_6478375_6478629
ENSMUSG00000085156.9_6475591_6478766_2	chr11	-	592	4	NNC	ENSMUSG00000085156.9	novel	611	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	208.418382639877	2262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	-1	True	NA	NA	NA	6478766	6475590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_6475812_6476354_6476438_6478305_6478375_6478547
ENSMUSG00000085156.9_6475591_6478766_3	chr11	-	592	4	NNC	ENSMUSG00000085156.9	novel	611	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	207.929475223371	2313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	-1	True	NA	NA	NA	6478766	6475590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_6475818_6476354_6476438_6478311_6478375_6478547
ENSMUSG00000085156.9_6478033_6478818_1	chr11	-	531	3	NNC	ENSMUSG00000085156.9	novel	1540	2	NA	NA	-39	-982	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	216.5	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGACACCTGCCACGTG	NA	False	NA	-6	True	NA	NA	NA	6478818	6478032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_6478375_6478547_6478665_6478746
ENSMUSG00000085166.2_34795880_34817323_1	chr5	+	2533	18	Genic_Genomic	ENSMUSG00000085166.2	novel	785	2	NA	NA	-12182	7502	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGACGCCCCTGCGGGCG	NA	False	NA	NA	False	NA	NA	NA	34795879	34817323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ENSMUSG00000085166.2_34795880_34817492_1	chr5	+	2707	18	Genic_Genomic	ENSMUSG00000085166.2	novel	785	2	NA	NA	-12182	7671	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATGAGTGCGTCAGCTTC	NA	False	NA	NA	False	NA	NA	NA	34795879	34817492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809088_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ENSMUSG00000085166.2_34796366_34817492_1	chr5	+	2455	17	Genic_Genomic	ENSMUSG00000085166.2	novel	785	2	NA	NA	-11696	7671	multi-exon	FALSE	non_canonical	0	0	junction_1	0	812	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATGAGTGCGTCAGCTTC	NA	False	NA	NA	False	NA	NA	NA	34796365	34817492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ENSMUSG00000085169.3_91486414_91525511_1	chr16	+	1415	13	Genic_Genomic	ENSMUSG00000085169.3	novel	877	5	NA	NA	615	12981	multi-exon	FALSE	non_canonical	0	0	junction_1	0	634	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGCCTTCTTGGGTCCA	1111	False	NA	NA	False	NA	NA	NA	91486413	91525511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_91486804_91487591_91487631_91489473_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000085169.3_91486414_91525511_2	chr16	+	1409	13	Genic_Genomic	ENSMUSG00000085169.3	novel	877	5	NA	NA	615	12981	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2806	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGCCTTCTTGGGTCCA	1111	False	NA	NA	False	NA	NA	NA	91486413	91525511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000085169.3_91486494_91525511_1	chr16	+	1329	13	Genic_Genomic	ENSMUSG00000085169.3	novel	877	5	NA	NA	695	12981	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGCCTTCTTGGGTCCA	1191	False	NA	NA	False	NA	NA	NA	91486493	91525511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000085185.11_24434028_24439764_2	chr17	+	2284	9	Genic_Genomic	ENSMUSG00000085185.11	novel	826	3	NA	NA	2484	-755	multi-exon	FALSE	non_canonical	0	0	junction_1	0	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGGTAGGCTACCCAAT	7339	False	NA	NA	False	NA	NA	NA	24434027	24439764	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_+_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439490_24439590_24439664
ENSMUSG00000085185.11_24434213_24439764_1	chr17	+	2099	9	Genic_Genomic	ENSMUSG00000085185.11	novel	826	3	NA	NA	2669	-755	multi-exon	FALSE	non_canonical	0	0	junction_1	0	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGGTAGGCTACCCAAT	7524	False	NA	NA	False	NA	NA	NA	24434212	24439764	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_+_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439490_24439590_24439664
ENSMUSG00000085185.11_24434213_24439764_2	chr17	+	1573	9	Genic_Genomic	ENSMUSG00000085185.11	novel	826	3	NA	NA	2669	-755	multi-exon	FALSE	non_canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGGTAGGCTACCCAAT	7524	False	NA	NA	False	NA	NA	NA	24434212	24439764	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_+_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24439225_24439285_24439495_24439590_24439664
ENSMUSG00000085185.11_24434520_24439764_2	chr17	+	1792	9	Genic_Genomic	ENSMUSG00000085185.11	novel	826	3	NA	NA	2976	-755	multi-exon	FALSE	non_canonical	0	0	junction_1	0	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGGTAGGCTACCCAAT	7831	False	NA	NA	False	NA	NA	NA	24434519	24439764	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_+_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439490_24439590_24439664
ENSMUSG00000085208.4_86092196_86100373_1	chr11	+	2778	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	0	1645	0	-1645	multi-exon	FALSE	canonical	3	24	junction_1	0	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCGTCTCTGTTTCTGTG	NA	False	NA	9	True	NA	NA	NA	86092195	86100373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_86092379_86097778
ENSMUSG00000085227.2_138262331_138264923_1	chr5	+	938	2	FSM	ENSMUSG00000085227.2	ENSMUST00000141454.2	624	2	15	-329	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGACACAAGTTTATATT	6201	False	NA	NA	False	NA	NA	NA	138262330	138264923	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138262364_138264018
ENSMUSG00000085236.4_84264262_84339091_1	chr7	+	1593	7	NIC	ENSMUSG00000085236.4	novel	1717	5	NA	NA	-74586	-86137	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTTTGGCTGCTCGG	NA	False	NA	NA	False	ATTAAA	-2	NA	84264261	84339091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
ENSMUSG00000085241.8_132079245_132080944_2	chr4	-	802	2	ISM	ENSMUSG00000028896.14	ENSMUST00000155129.2	507	6	-28	14111	-28	-12443	5prime_fragment	FALSE	canonical	3	1001	junction_1	0	19187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	-10	True	ATTAAA	-14	NA	132080944	132079244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_-_132080010_132080907
ENSMUSG00000085241.8_132079245_132080944_3	chr4	-	378	3	NNC	ENSMUSG00000085241.8	novel	426	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	500.5	5546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	-10	True	ATTAAA	-14	NA	132080944	132079244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_132079550_132079973_132080010_132080907
ENSMUSG00000085241.8_132079439_132080944_2	chr4	-	189	3	FSM	ENSMUSG00000085241.8	ENSMUST00000152943.8	437	3	53	195	0	-124	multi-exon	FALSE	canonical	3	959	junction_1	21	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGGTAAATACATTTCT	NA	False	NA	NA	False	NA	NA	NA	132080944	132079438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132079555_132079973_132080010_132080907
ENSMUSG00000085242.2_96658703_96668357_1	chr11	+	2229	9	NIC	ENSMUSG00000085242.2	novel	791	2	NA	NA	1075	9262	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTGAGTCGCCGGTGCCC	46	False	NA	NA	False	NA	NA	NA	96658702	96668357	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793_96667888_96668280
ENSMUSG00000085278.2_117741530_117744517_1	chr4	+	967	7	Genic_Genomic	ENSMUSG00000085278.2	novel	338	2	NA	NA	712	1325	multi-exon	FALSE	non_canonical	0	0	junction_1	0	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCGCCACCTGACCGGC	NA	False	NA	NA	False	NA	NA	NA	117741529	117744517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743589_117744366
ENSMUSG00000085278.2_117741530_117744517_2	chr4	+	970	8	Genic_Genomic	ENSMUSG00000085278.2	novel	338	2	NA	NA	712	1325	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1573	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCGCCACCTGACCGGC	NA	False	NA	NA	False	NA	NA	NA	117741529	117744517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743486_117743557_117743786_117743836_117744366
ENSMUSG00000085278.2_117741530_117744517_3	chr4	+	979	8	Genic_Genomic	ENSMUSG00000085278.2	novel	338	2	NA	NA	712	1325	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3311	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCGCCACCTGACCGGC	NA	False	NA	NA	False	NA	NA	NA	117741529	117744517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743269_117743343_117743472_117743557_117743786_117743836_117744366
ENSMUSG00000085278.2_117741530_117744517_4	chr4	+	976	8	Genic_Genomic	ENSMUSG00000085278.2	novel	338	2	NA	NA	712	1325	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2014	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCGCCACCTGACCGGC	NA	False	NA	NA	False	NA	NA	NA	117741529	117744517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_117741839_117742300_117742492_117742825_117742870_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744366
ENSMUSG00000085278.2_117741530_117744517_5	chr4	+	950	7	Genic_Genomic	ENSMUSG00000085278.2	novel	338	2	NA	NA	712	1325	multi-exon	FALSE	non_canonical	0	0	junction_1	0	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCGCCACCTGACCGGC	NA	False	NA	NA	False	NA	NA	NA	117741529	117744517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_117741839_117742300_117742510_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744366
ENSMUSG00000085278.2_117741530_117744517_6	chr4	+	984	8	Genic_Genomic	ENSMUSG00000085278.2	novel	338	2	NA	NA	712	1325	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5710	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCGCCACCTGACCGGC	NA	False	NA	NA	False	NA	NA	NA	117741529	117744517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744366
ENSMUSG00000085278.2_117741530_117744517_7	chr4	+	1040	8	Genic_Genomic	ENSMUSG00000085278.2	novel	338	2	NA	NA	712	1325	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2770	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCGCCACCTGACCGGC	NA	False	NA	NA	False	NA	NA	NA	117741529	117744517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743892_117744366
ENSMUSG00000085278.2_117741530_117744517_8	chr4	+	974	8	Genic_Genomic	ENSMUSG00000085278.2	novel	338	2	NA	NA	712	1325	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCGCCACCTGACCGGC	NA	False	NA	NA	False	NA	NA	NA	117741529	117744517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744376
ENSMUSG00000085334.8_126926520_126930806_1	chr4	+	295	4	NNC	ENSMUSG00000085334.8	novel	574	3	NA	NA	-1004	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	134.514765814844	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTGTTCAAGTAGGA	NA	False	NA	18	True	AATAAA	-19	NA	126926519	126930806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_126926599_126929600_126929648_126930355_126930443_126930724
ENSMUSG00000085334.8_126929474_126930806_1	chr4	+	343	3	FSM	ENSMUSG00000085334.8	ENSMUST00000130659.8	574	3	231	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	16	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTGTTCAAGTAGGA	NA	False	NA	18	True	AATAAA	-19	NA	126929473	126930806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_126929648_126930355_126930443_126930724
ENSMUSG00000085334.8_126929575_126930806_1	chr4	+	242	3	FSM	ENSMUSG00000085334.8	ENSMUST00000130659.8	574	3	332	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	16	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTGTTCAAGTAGGA	NA	False	NA	18	True	AATAAA	-19	NA	126929574	126930806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_126929648_126930355_126930443_126930724
ENSMUSG00000085334.8_126941386_126954931_1	chr4	+	3339	8	NIC	ENSMUSG00000085334.8	novel	1970	3	NA	NA	11811	11740	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGCTCCGCCCCTCTCCC	NA	False	NA	NA	False	NA	NA	NA	126941385	126954931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ENSMUSG00000085334.8_126941386_126954931_2	chr4	+	3189	7	NIC	ENSMUSG00000085334.8	novel	1970	3	NA	NA	11811	11740	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGCTCCGCCCCTCTCCC	NA	False	NA	NA	False	NA	NA	NA	126941385	126954931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126954788
ENSMUSG00000085337.2_91418281_91443819_2	chr16	+	3447	22	NIC	ENSMUSG00000085337.2	novel	2745	2	NA	NA	9925	23070	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAAGTTGGCCCGGGGA	2223	False	NA	NA	False	NA	NA	NA	91418280	91443819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443614
ENSMUSG00000085385.8_158197705_158203412_1	chr2	-	1052	6	NIC	ENSMUSG00000085385.8	novel	1553	6	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	36.7456119829293	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAGTCTGCCTTTTAAA	8377	False	NA	-17	True	AATAAA	-12	NA	158203412	158197704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202383_158202520_158202862_158203117_158203324
ENSMUSG00000085385.8_158197705_158203463_1	chr2	-	977	6	NIC	ENSMUSG00000085385.8	novel	933	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	23.4059821413245	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAGTCTGCCTTTTAAA	8326	False	NA	-17	True	AATAAA	-12	NA	158203463	158197704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202383_158202520_158202862_158202991_158203324
ENSMUSG00000085385.8_158197705_158203463_2	chr2	-	914	6	NIC	ENSMUSG00000085385.8	novel	1046	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	30.9476978142155	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAGTCTGCCTTTTAAA	8326	False	NA	-17	True	AATAAA	-12	NA	158203463	158197704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202446_158202520_158202862_158202991_158203324
ENSMUSG00000085389.8_129854601_129855708_1	chr4	+	718	2	ISM	ENSMUSG00000085389.8	ENSMUST00000147634.8	564	4	434	1605	0	-1605	internal_fragment	FALSE	canonical	3	9	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTGTAGAATATGTGGC	5424	False	NA	NA	False	AATAAA	-16	NA	129854600	129855708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_129854602_129854991
ENSMUSG00000085412.8_52079974_52090048_1	chr6	+	1297	3	FSM	ENSMUSG00000085412.8	ENSMUST00000155758.2	408	3	-9	-880	0	540	multi-exon	FALSE	canonical	3	43	junction_2	88.5	1731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTACACAACTAAGATCCA	823	False	NA	NA	False	AATAAA	-20	NA	52079973	52090048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_52080017_52083750_52083877_52088920
ENSMUSG00000085437.9_26521680_26609252_1	chr8	+	2605	22	Genic_Genomic	ENSMUSG00000085437.9	novel	622	5	NA	NA	-50957	22702	multi-exon	FALSE	non_canonical	0	0	junction_1	0	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCACCCGGCGCCGCCAGC	NA	False	NA	NA	False	NA	NA	NA	26521679	26609252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538279_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ENSMUSG00000085438.2_119424784_119430525_1	chr2	+	842	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	0	7458	0	-702	multi-exon	FALSE	canonical	3	345	junction_2	41.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATCTAAATTCTGGCTC	NA	False	NA	10	True	AATATA	-18	NA	119424783	119430525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_119424916_119426739_119426993_119430068
ENSMUSG00000085438.2_119424784_119430525_2	chr2	+	673	3	FSM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	6	702	0	-702	multi-exon	FALSE	canonical	3	71	junction_2	178.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATCTAAATTCTGGCTC	NA	False	NA	10	True	AATATA	-18	NA	119424783	119430525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_119424916_119426739_119426824_119430068
ENSMUSG00000085438.2_119424784_119431227_1	chr2	+	1544	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	0	6756	0	0	multi-exon	FALSE	canonical	3	345	junction_2	41.5	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTTGGACAGATTTT	NA	False	NA	NA	False	TATAAA	-29	NA	119424783	119431227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_119424916_119426739_119426993_119430068
ENSMUSG00000085438.2_119424784_119431932_2	chr2	+	2249	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	0	6051	0	705	multi-exon	FALSE	canonical	3	345	junction_2	41.5	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTTTAAGGTAACCTAAA	NA	False	NA	19	True	AATAAA	-16	NA	119424783	119431932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_119424916_119426739_119426993_119430068
ENSMUSG00000085457.4_34101910_34119961_1	chr13	+	1313	7	NNC	ENSMUSG00000085457.4	novel	397	2	NA	NA	-17640	-652	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1543	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCCCAACCGCGCCCGA	NA	False	NA	NA	False	NA	NA	NA	34101909	34119961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_34102426_34102728_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119904
ENSMUSG00000085457.4_34101910_34119961_2	chr13	+	1318	7	NIC	ENSMUSG00000085457.4	novel	397	2	NA	NA	-17640	-652	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1758	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCCCAACCGCGCCCGA	NA	False	NA	NA	False	NA	NA	NA	34101909	34119961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119904
ENSMUSG00000085485.2_129110130_129127107_1	chr2	+	1997	6	NIC	ENSMUSG00000085485.2	novel	560	3	NA	NA	21834	16661	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACAGGCTTCTGATCC	9051	False	NA	NA	False	NA	NA	NA	129110129	129127107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811_129124020_129126776
ENSMUSG00000085492.8_71895552_71905741_1	chr17	-	1363	4	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.8807492274273	346	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATGTATTTTTTAA	NA	False	NA	-15	True	AATAAA	-17	NA	71905741	71895551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_71895980_71897482_71897518_71898852_71898942_71904930
ENSMUSG00000085492.8_71895552_71905741_2	chr17	-	1149	4	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.8807492274273	216	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATGTATTTTTTAA	NA	False	NA	-15	True	AATAAA	-17	NA	71905741	71895551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_71895980_71897482_71897518_71898852_71898942_71905144
ENSMUSG00000085492.8_71895552_71905762_1	chr17	-	1081	3	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	31	181	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATGTATTTTTTAA	NA	False	NA	-15	True	AATAAA	-17	NA	71905762	71895551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_71895980_71897482_71897518_71905144
ENSMUSG00000085492.8_71895852_71905762_1	chr17	-	781	3	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	-12	-300	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	31	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTTACCTTATTTTGG	NA	False	NA	NA	False	NA	NA	NA	71905762	71895851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_71895980_71897482_71897518_71905144
ENSMUSG00000085495.2_170353365_170360987_1	chr2	-	662	4	NNC	ENSMUSG00000085495.2	novel	3172	3	NA	NA	-7140	-12088	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1185	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACTGAACCACGGGGCG	NA	False	NA	NA	False	NA	NA	NA	170360987	170353364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_170353390_170357665_170357767_170358469_170358611_170360592
ENSMUSG00000085495.2_170353365_170360987_2	chr2	-	755	4	NIC	ENSMUSG00000085495.2	novel	3172	3	NA	NA	-7140	-12088	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1614	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACTGAACCACGGGGCG	NA	False	NA	NA	False	NA	NA	NA	170360987	170353364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_170353476_170357658_170357767_170358469_170358611_170360592
ENSMUSG00000085526.2_130366764_130390468_1	chr1	+	2520	10	NIC	ENSMUSG00000085526.2	novel	2547	5	NA	NA	-23549	-94344	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCAGCTGTGGCGGGGCGG	NA	False	NA	NA	False	NA	NA	NA	130366763	130390468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
ENSMUSG00000085526.2_130367891_130390468_1	chr1	+	1393	10	NIC	ENSMUSG00000085526.2	novel	2547	5	NA	NA	-22422	-94344	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCAGCTGTGGCGGGGCGG	NA	False	NA	NA	False	NA	NA	NA	130367890	130390468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
ENSMUSG00000085551.2_59812325_59812717_1	chr11	+	311	2	NNC	ENSMUSG00000085551.2	novel	274	2	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGCTCTGACGAAAGCT	2003	False	NA	NA	False	AATAAA	-18	NA	59812324	59812717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_59812469_59812550
ENSMUSG00000085587.2_10583629_10585936_1	chrX	-	2029	2	NIC	ENSMUSG00000085587.2	novel	543	2	NA	NA	-987	83	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	533	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGGGCTAAGGCAGGGCG	9799	False	NA	NA	False	NA	NA	NA	10585936	10583628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_10583944_10584222
ENSMUSG00000085596.2_167449764_167473899_1	chr2	+	1838	5	NIC	ENSMUSG00000085596.2	novel	2019	4	NA	NA	54530	24134	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	3760	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGCCGGCCCCTTCTTCA	5998	False	NA	NA	False	NA	NA	NA	167449763	167473899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_167451168_167452223_167452350_167459748_167459898_167471089_167471209_167473859
ENSMUSG00000085596.2_167449764_167473899_2	chr2	+	953	5	NNC	ENSMUSG00000085596.2	novel	2019	4	NA	NA	54530	24134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGCCGGCCCCTTCTTCA	5998	False	NA	NA	False	NA	NA	NA	167449763	167473899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_167450256_167451021_167451168_167452223_167452350_167459748_167459898_167473859
ENSMUSG00000085612.2_14117108_14135211_1	chr16	+	1352	4	Genic_Genomic	ENSMUSG00000085612.2	novel	520	2	NA	NA	-12597	3333	multi-exon	FALSE	non_canonical	0	0	junction_1	0	897	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAGTGCGTACGCACGG	NA	False	NA	NA	False	NA	NA	NA	14117107	14135211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_14118074_14122317_14122452_14131679_14131878_14135157
ENSMUSG00000085612.2_14117108_14135211_3	chr16	+	1390	5	Genic_Genomic	ENSMUSG00000085612.2	novel	520	2	NA	NA	-12597	3333	multi-exon	FALSE	non_canonical	0	0	junction_1	0	966	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAGTGCGTACGCACGG	NA	False	NA	NA	False	NA	NA	NA	14117107	14135211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_14118074_14122317_14122405_14128910_14128996_14131679_14131878_14135157
ENSMUSG00000085622.10_71056569_71062369_1	chr12	-	826	3	FSM	ENSMUSG00000085622.10	ENSMUST00000136690.3	1063	3	237	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTTCATAGATTCCATT	NA	False	NA	NA	False	AATAAA	-26	NA	71062369	71056568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_71057254_71061229_71061282_71062280
ENSMUSG00000085628.5_85082134_85125664_1	chr11	+	2125	13	NIC	ENSMUSG00000085628.5	novel	447	2	NA	NA	-43467	-385	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCCTCCGCCTCCCTCC	9687	False	NA	NA	False	NA	NA	NA	85082133	85125664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
ENSMUSG00000085687.2_4353171_4382334_1	chr10	+	2031	13	NIC	ENSMUSG00000085687.2	novel	4118	2	NA	NA	-5862	8965	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGCCCCGCCCCGCTGC	5354	False	NA	NA	False	NA	NA	NA	4353170	4382334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382063
ENSMUSG00000085687.2_4353171_4382334_2	chr10	+	1829	13	NIC	ENSMUSG00000085687.2	novel	4118	2	NA	NA	-5862	8965	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGCCCCGCCCCGCTGC	5354	False	NA	NA	False	NA	NA	NA	4353170	4382334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
ENSMUSG00000085689.2_65755972_65913360_1	chr6	-	1603	11	NIC	ENSMUSG00000085689.2	novel	816	3	NA	NA	-157127	-10444	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCCCCGCGGCCAGGCCC	NA	False	NA	NA	False	NA	NA	NA	65913360	65755971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_65756178_65771283_65771368_65808232_65808356_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ENSMUSG00000085714.2_135730679_135748969_1	chr4	+	4603	11	NIC	ENSMUSG00000085714.2	novel	507	2	NA	NA	-198	10721	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	435	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTCGCGTCGCGTCCTCG	2525	False	NA	NA	False	NA	NA	NA	135730678	135748969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
ENSMUSG00000085714.2_135732604_135748969_1	chr4	+	2678	11	Genic_Genomic	ENSMUSG00000085714.2	novel	507	2	NA	NA	1727	10721	multi-exon	FALSE	non_canonical	0	0	junction_1	0	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTCGCGTCGCGTCCTCG	4450	False	NA	NA	False	NA	NA	NA	135732603	135748969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
ENSMUSG00000085737.2_31840286_31861848_1	chr2	-	1376	6	Genic_Genomic	ENSMUSG00000085737.2	novel	663	2	NA	NA	-9289	11416	multi-exon	TRUE	non_canonical	0	0	junction_1	0	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGACGGGACCCAGGGGCG	NA	False	NA	NA	False	NA	NA	NA	31861848	31840285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
ENSMUSG00000085737.2_31840286_31863454_1	chr2	-	2982	6	Genic_Genomic	ENSMUSG00000085737.2	novel	663	2	NA	NA	-10895	11416	multi-exon	FALSE	non_canonical	0	0	junction_1	0	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGACGGGACCCAGGGGCG	NA	False	NA	NA	False	NA	NA	NA	31863454	31840285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
ENSMUSG00000085757.8_61554145_61565261_1	chrX	-	672	4	NNC	ENSMUSG00000085757.8	novel	594	3	NA	NA	5356	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	20.4993224820291	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATATGAGTTGATTT	NA	False	NA	NA	False	AATAAA	-25	NA	61565261	61554144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_61554605_61558040_61558144_61564384_61564454_61565221
ENSMUSG00000085757.8_61554145_61597019_1	chrX	-	633	3	NNC	ENSMUSG00000085757.8	novel	594	3	NA	NA	-26402	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	22.5	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATATGAGTTGATTT	NA	False	NA	NA	False	AATAAA	-25	NA	61597019	61554144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_61554605_61558040_61558144_61596949
ENSMUSG00000085772.8_31750688_31753412_1	chr11	-	753	5	NNC	ENSMUSG00000085772.8	novel	715	5	NA	NA	21061	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.11803398874989	31	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTGCTTTAAAAGTACAT	NA	False	NA	NA	False	AATAAA	-21	NA	31753412	31750687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_31750814_31750949_31751038_31752331_31752449_31752829_31752982_31753142
ENSMUSG00000085793.3_84498196_84578347_1	chr12	+	2224	6	NNC	ENSMUSG00000085793.4	novel	2270	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	52.6399088145107	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCCAGGTTTTCCTTG	NA	False	NA	5	True	AATAAA	-16	NA	84498195	84578347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509181_84576463
ENSMUSG00000085794.6_83669788_83675055_1	chr6	-	1083	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5470	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	57.155489675096	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTAGGCGGACTTTGC	2754	False	NA	-11	True	NA	NA	NA	83675055	83669787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_83670449_83671333_83671456_83672566_83672604_83672682_83672843_83674952
ENSMUSG00000085794.6_83669788_83675055_2	chr6	-	1172	6	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5470	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	56.560056577058	358	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTAGGCGGACTTTGC	2754	False	NA	-11	True	NA	NA	NA	83675055	83669787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_83670449_83671333_83671456_83672566_83672604_83672682_83672843_83673961_83674051_83674952
ENSMUSG00000085794.6_83669788_83675055_3	chr6	-	1233	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5470	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	48.1949167444037	417	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTAGGCGGACTTTGC	2754	False	NA	-11	True	NA	NA	NA	83675055	83669787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_83670449_83671333_83671456_83672566_83672825_83673961_83674051_83674952
ENSMUSG00000085794.6_83669788_83675055_4	chr6	-	1126	6	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5470	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	51.4587213210744	303	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTAGGCGGACTTTGC	2754	False	NA	-11	True	NA	NA	NA	83675055	83669787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_83670449_83671333_83671456_83672566_83672604_83672682_83672797_83673961_83674051_83674952
ENSMUSG00000085823.8_137609278_137611252_1	chr4	-	508	3	NNC	ENSMUSG00000085823.8	novel	714	2	NA	NA	-4	403	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	4.5	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTGTATTTGTGCGTT	NA	False	NA	NA	False	NA	NA	NA	137611252	137609277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_137609451_137610538_137610721_137611099
ENSMUSG00000085860.2_97489337_97514726_1	chr11	+	1619	4	FSM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	0	-1007	0	1007	multi-exon	FALSE	canonical	3	87	junction_3	12.3917535302941	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCGCATTCAACTGGAGAA	NA	False	NA	15	True	AATAAA	-16	NA	97489336	97514726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_97489494_97505749_97505855_97509262_97509326_97513432
ENSMUSG00000085912.3_29275834_29278729_1	chr17	-	1135	3	NIC	ENSMUSG00000085912.3	novel	3218	2	NA	NA	12587	570	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGAGTCAGGCGCTCAG	NA	False	NA	NA	False	NA	NA	NA	29278729	29275833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_29275960_29276834_29276933_29277818
ENSMUSG00000085912.3_29276137_29278729_1	chr17	-	1440	3	NNC	ENSMUSG00000085912.3	novel	3218	2	NA	NA	12587	267	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	60	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGCTCAGAGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	29278729	29276136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_29276569_29276835_29276933_29277818
ENSMUSG00000085955.2_98573391_98586805_1	chr11	-	2137	12	NIC	ENSMUSG00000085955.2	novel	353	2	NA	NA	-12564	356	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1942	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATGCCAGGCATGGCGA	418	False	NA	NA	False	GGGGCT	-5	NA	98586805	98573390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ENSMUSG00000085955.2_98573747_98586805_1	chr11	-	1781	12	NIC	ENSMUSG00000085955.2	novel	353	2	NA	NA	-12564	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCTCTCTCTGGGAGTG	418	False	NA	NA	False	NA	NA	NA	98586805	98573746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ENSMUSG00000085962.9_35161733_35178105_1	chr13	+	1500	10	Genic_Genomic	ENSMUSG00000085962.9	novel	982	5	NA	NA	13692	3670	multi-exon	FALSE	non_canonical	0	0	junction_1	0	471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGGGGCGGAGCCAGAG	NA	False	NA	NA	False	NA	NA	NA	35161732	35178105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177312_35177996
ENSMUSG00000085962.9_35161733_35178105_2	chr13	+	1576	10	Genic_Genomic	ENSMUSG00000085962.9	novel	982	5	NA	NA	13692	3670	multi-exon	FALSE	non_canonical	0	0	junction_1	0	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGGGGCGGAGCCAGAG	NA	False	NA	NA	False	NA	NA	NA	35161732	35178105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177812
ENSMUSG00000085962.9_35161733_35178115_1	chr13	+	1694	10	Genic_Genomic	ENSMUSG00000085962.9	novel	982	5	NA	NA	13692	3680	multi-exon	FALSE	non_canonical	0	0	junction_1	0	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCAGAGGTGCGCTCCG	NA	False	NA	NA	False	NA	NA	NA	35161732	35178115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177312_35177812
ENSMUSG00000086003.8_94029381_94046602_1	chr11	+	426	4	NIC	ENSMUSG00000086003.8	novel	695	6	NA	NA	2895	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	66.6949939817242	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTTTACCTGCTTGTA	NA	False	NA	15	True	AATAAA	-22	NA	94029380	94046602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_94029490_94042163_94042239_94046281_94046324_94046402
ENSMUSG00000086003.8_94041909_94046602_1	chr11	+	373	4	NNC	ENSMUSG00000086003.8	novel	695	6	NA	NA	15423	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	65.6725885654653	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTTTACCTGCTTGTA	NA	False	NA	15	True	AATAAA	-22	NA	94041908	94046602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_94041965_94042163_94042239_94046281_94046324_94046402
ENSMUSG00000086061.8_141131664_141135644_1	chr4	+	939	7	Genic_Genomic	ENSMUSG00000086061.8	novel	561	4	NA	NA	5496	-1740	multi-exon	FALSE	non_canonical	0	0	junction_1	0	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTGACCCTGCCTCCAG	NA	False	NA	NA	False	NA	NA	NA	141131663	141135644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_141131944_141132063_141132151_141132362_141132447_141132582_141132672_141134399_141134534_141135114_141135329_141135593
ENSMUSG00000086061.8_141131664_141135644_3	chr4	+	1248	5	Genic_Genomic	ENSMUSG00000086061.8	novel	561	4	NA	NA	5496	-1740	multi-exon	FALSE	non_canonical	0	0	junction_1	0	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTGACCCTGCCTCCAG	NA	False	NA	NA	False	NA	NA	NA	141131663	141135644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_141132447_141132582_141132672_141134399_141134534_141135114_141135329_141135616
ENSMUSG00000086075.2_117527204_117528844_1	chr5	+	773	2	FSM	ENSMUSG00000086075.2	ENSMUST00000140833.2	3492	2	0	2719	0	195	multi-exon	FALSE	canonical	3	12	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGCAGTAGACTCATGC	NA	False	NA	NA	False	NA	NA	NA	117527203	117528844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_117527351_117528218
ENSMUSG00000086083.2_33776967_33787373_1	chr16	+	1627	6	Genic_Genomic	ENSMUSG00000086083.2	novel	869	2	NA	NA	-9642	-309	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1051	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGCCGAGGGGCTTGGGG	NA	False	NA	NA	False	NA	NA	NA	33776966	33787373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784289_33787195
ENSMUSG00000086083.2_33776967_33787373_2	chr16	+	1626	6	Genic_Genomic	ENSMUSG00000086083.2	novel	869	2	NA	NA	-9642	-309	multi-exon	FALSE	non_canonical	0	0	junction_1	0	639	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGCCGAGGGGCTTGGGG	NA	False	NA	NA	False	NA	NA	NA	33776966	33787373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_33777306_33779422_33779538_33780546_33780723_33781938_33782603_33784141_33784296_33787195
ENSMUSG00000086083.2_33776967_33787373_3	chr16	+	1629	6	Genic_Genomic	ENSMUSG00000086083.2	novel	869	2	NA	NA	-9642	-309	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1190	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGCCGAGGGGCTTGGGG	NA	False	NA	NA	False	NA	NA	NA	33776966	33787373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787200
ENSMUSG00000086083.2_33776967_33787373_4	chr16	+	1626	6	Genic_Genomic	ENSMUSG00000086083.2	novel	869	2	NA	NA	-9642	-309	multi-exon	FALSE	non_canonical	0	0	junction_1	0	648	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGCCGAGGGGCTTGGGG	NA	False	NA	NA	False	NA	NA	NA	33776966	33787373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_33777306_33779422_33779538_33780546_33780723_33781946_33782611_33784141_33784296_33787195
ENSMUSG00000086083.2_33776967_33787373_5	chr16	+	1343	4	Genic_Genomic	ENSMUSG00000086083.2	novel	869	2	NA	NA	-9642	-309	multi-exon	FALSE	non_canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGCCGAGGGGCTTGGGG	NA	False	NA	NA	False	NA	NA	NA	33776966	33787373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_33777306_33781938_33782611_33784141_33784296_33787195
ENSMUSG00000086103.2_11558922_11615805_1	chr4	-	2719	14	Genic_Genomic	ENSMUSG00000086103.2	novel	432	3	NA	NA	-798	52217	multi-exon	FALSE	non_canonical	0	0	junction_1	0	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGGCCGGGCGCCGAGCAT	NA	False	NA	NA	False	NA	NA	NA	11615805	11558921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_-_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11615442
ENSMUSG00000086103.2_11558922_11615805_2	chr4	-	2920	15	Genic_Genomic	ENSMUSG00000086103.2	novel	432	3	NA	NA	-798	52217	multi-exon	FALSE	non_canonical	0	0	junction_1	0	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGGCCGGGCGCCGAGCAT	NA	False	NA	NA	False	NA	NA	NA	11615805	11558921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_-_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ENSMUSG00000086147.3_147056433_147073635_1	chr4	+	798	6	NNC	ENSMUSG00000086147.3	novel	2295	5	NA	NA	0	-1577	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	124.698997590197	143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGTTTTCTACCATT	NA	False	NA	NA	False	AATACA	-19	NA	147056432	147073635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147056575_147058404_147058498_147065612_147065693_147067150_147067255_147071090_147071218_147073383
ENSMUSG00000086147.3_147056433_147075934_1	chr4	+	2751	6	NNC	ENSMUSG00000086147.3	novel	2295	5	NA	NA	0	722	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	17.2788888531641	1121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	147056432	147075934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147056575_147065612_147065693_147067150_147067255_147071090_147071218_147073383_147074794_147075046
ENSMUSG00000086147.3_147056433_147075934_2	chr4	+	2855	7	NNC	ENSMUSG00000086147.3	novel	2295	5	NA	NA	0	722	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	120.495389492249	1358	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	147056432	147075934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147056575_147058404_147058509_147065612_147065693_147067150_147067255_147071090_147071218_147073383_147074794_147075046
ENSMUSG00000086147.3_147056433_147075934_3	chr4	+	2746	6	NNC	ENSMUSG00000086147.3	novel	2295	5	NA	NA	0	722	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.2788888531641	1092	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	147056432	147075934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147056575_147065617_147065693_147067150_147067255_147071090_147071218_147073383_147074794_147075046
ENSMUSG00000086147.3_147056433_147114014_1	chr4	+	1166	3	NNC	ENSMUSG00000086147.3	novel	2295	5	NA	NA	0	38802	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	168.5	650	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGCGAGACTGT	NA	False	NA	NA	False	NA	NA	NA	147056432	147114014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_147056575_147058404_147058498_147113083
ENSMUSG00000086196.8_60122447_60213575_1	chr2	+	6829	35	NIC	ENSMUSG00000086196.8	novel	1381	6	NA	NA	-46085	11997	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGTCCCAAGCCTCTCC	NA	False	NA	NA	False	NA	NA	NA	60122446	60213575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ENSMUSG00000086196.8_60180259_60213647_1	chr2	+	1989	12	NIC	ENSMUSG00000086196.8	novel	1381	6	NA	NA	-5437	12069	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACCTCTGAGGCGCGCAG	NA	False	NA	NA	False	NA	NA	NA	60180258	60213647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ENSMUSG00000086202.2_45586617_45588459_1	chr2	+	830	3	NIC	ENSMUSG00000086202.2	novel	635	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_1	10	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTTTATATCAGA	NA	False	NA	NA	False	ATTAAA	-17	NA	45586616	45588459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_45586642_45586810_45587155_45587998
ENSMUSG00000086202.2_45586617_45588459_2	chr2	+	999	2	FSM	ENSMUSG00000086202.2	ENSMUST00000134308.2	424	2	-195	-380	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTTTATATCAGA	NA	False	NA	NA	False	ATTAAA	-17	NA	45586616	45588459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_45587155_45587998
ENSMUSG00000086228.4_65278985_65285487_1	chr9	+	1137	4	NNC	ENSMUSG00000086228.4	novel	846	4	NA	NA	-143	156	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	403.291733391874	2477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGTGTAGTGACACATG	NA	False	NA	20	True	NA	NA	NA	65278984	65285487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_65279411_65281039_65281242_65284190_65284293_65285080
ENSMUSG00000086228.4_65278985_65287251_1	chr9	+	2909	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	-143	-1920	-143	-408	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	2742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGACCTGAGCAACTGTC	NA	False	NA	NA	False	NA	NA	NA	65278984	65287251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
ENSMUSG00000086228.4_65278985_65287497_1	chr9	+	3155	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	-143	-2166	-143	-162	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	3466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTTTTCTCATTCA	NA	False	NA	NA	False	NA	NA	NA	65278984	65287497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
ENSMUSG00000086237.2_45551512_45563276_1	chr16	+	1198	4	Genic_Genomic	ENSMUSG00000086237.2	novel	627	2	NA	NA	-5354	5595	multi-exon	FALSE	non_canonical	0	0	junction_1	0	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACAGACGCGCGCAGGTC	NA	False	NA	NA	False	NA	NA	NA	45551511	45563276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_45552323_45557255_45557394_45557886_45557999_45563139
ENSMUSG00000086237.2_45551737_45563276_1	chr16	+	973	4	Genic_Genomic	ENSMUSG00000086237.2	novel	627	2	NA	NA	-5129	5595	multi-exon	FALSE	non_canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACAGACGCGCGCAGGTC	NA	False	NA	NA	False	NA	NA	NA	45551736	45563276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_45552323_45557255_45557394_45557886_45557999_45563139
ENSMUSG00000086237.2_45551737_45563276_2	chr16	+	1199	6	Genic_Genomic	ENSMUSG00000086237.2	novel	627	2	NA	NA	-5129	5595	multi-exon	FALSE	non_canonical	0	0	junction_1	0	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACAGACGCGCGCAGGTC	NA	False	NA	NA	False	NA	NA	NA	45551736	45563276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_45552323_45553100_45553143_45557255_45557394_45557886_45557999_45560681_45560866_45563139
ENSMUSG00000086247.8_110283726_110319838_1	chr5	-	3222	19	NIC	ENSMUSG00000086247.8	novel	1250	3	NA	NA	-2076	18540	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	427	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGATCCACGGGAGGCGA	NA	False	NA	NA	False	NA	NA	NA	110319838	110283725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ENSMUSG00000086288.2_94882187_94913932_1	chr3	-	3325	11	Fusion	ENSMUSG00000019338.14_ENSMUSG00000086288.2_ENSMUSG00000084846.2	novel	814	2	NA	NA	-1752	19534	multi-exon	FALSE	non_canonical	0	0	junction_1	0	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAGCAGGACACAAAATAAC	NA	False	NA	NA	False	NA	NA	NA	94913932	94882186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr3_-_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ENSMUSG00000086290.10_132035987_132037383_1	chr4	+	467	2	FSM	ENSMUSG00000086290.10	ENSMUST00000137343.9	1416	2	-1	950	0	-218	multi-exon	FALSE	canonical	3	139	junction_1	0	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGGCCTCAAGTTGAGC	NA	False	NA	NA	False	NA	NA	NA	132035986	132037383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132036219_132037148
ENSMUSG00000086290.10_132035987_132038075_1	chr4	+	912	3	FSM	ENSMUSG00000086290.10	ENSMUST00000126380.4	1213	3	41	260	0	-231	multi-exon	FALSE	canonical	3	139	junction_1	32	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGGAAAGCCTGAGTTGG	NA	False	NA	NA	False	NA	NA	NA	132035986	132038075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132036219_132037148_132037215_132037461
ENSMUSG00000086290.10_132035987_132038335_1	chr4	+	642	5	FSM	ENSMUSG00000086290.10	ENSMUST00000128000.9	422	5	-220	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	86.7478385897885	4680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	False	NA	27	True	AATAAA	-16	NA	132035986	132038335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132036253_132037148_132037215_132037461_132037527_132037761_132037816_132038144
ENSMUSG00000086316.9_152506623_152524292_1	chrX	+	705	3	FSM	ENSMUSG00000086316.9	ENSMUST00000185492.7	1346	3	17	624	0	32	multi-exon	FALSE	canonical	3	65	junction_2	49	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAGAGCTATACGATTA	NA	False	NA	41	True	AATAAA	-16	NA	152506622	152524292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_152506934_152508700_152508838_152524035
ENSMUSG00000086341.3_55797939_55807521_1	chr14	-	2702	15	Genic_Genomic	ENSMUSG00000086341.3	novel	535	4	NA	NA	5927	5677	multi-exon	FALSE	non_canonical	0	0	junction_1	0	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTCCCTCCCCCTCGGCC	NA	False	NA	NA	False	NA	NA	NA	55807521	55797938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr14_-_55798085_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUSG00000086341.3_55798428_55807521_1	chr14	-	2561	15	Genic_Genomic	ENSMUSG00000086341.3	novel	535	4	NA	NA	5927	5188	multi-exon	FALSE	non_canonical	0	0	junction_1	0	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCCCCGGCCCGGGATG	NA	False	NA	NA	False	NA	NA	NA	55807521	55798427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr14_-_55798433_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUSG00000086347.2_101339270_101349290_1	chr11	-	1091	7	NIC	ENSMUSG00000086347.2	novel	333	2	NA	NA	-1074	8132	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTCCACTTTCATTTCT	NA	False	NA	NA	False	NA	NA	NA	101349290	101339269	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_101339449_101347391_101347491_101348015_101348164_101348241_101348349_101348445_101348633_101348716_101348824_101349026
ENSMUSG00000086389.2_89221787_89230085_1	chr3	+	1595	5	NIC	ENSMUSG00000086389.2	novel	1844	3	NA	NA	-959	3871	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAGCGGCACGGGCACG	6569	False	NA	NA	False	NA	NA	NA	89221786	89230085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_89222875_89223114_89223193_89223376_89223443_89223769_89224060_89230012
ENSMUSG00000086401.2_110921533_110928481_2	chr5	+	1485	6	Genic_Genomic	ENSMUSG00000086401.2	novel	2260	2	NA	NA	2718	1355	multi-exon	FALSE	non_canonical	0	0	junction_1	0	532	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAAGGCGGCCGAAGGC	NA	False	NA	NA	False	NA	NA	NA	110921532	110928481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928453
ENSMUSG00000086407.2_150425000_150450464_1	chr2	+	2212	9	Genic_Genomic	ENSMUSG00000086407.2	novel	2658	3	NA	NA	-23153	-1710	multi-exon	TRUE	non_canonical	0	0	junction_1	0	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCCTGGCGCGAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	150424999	150450464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_+_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150442163_150442281_150450307
ENSMUSG00000086418.2_20524429_20748516_1	chr2	-	1333	6	NIC	ENSMUSG00000086418.2	novel	839	2	NA	NA	-30471	189757	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCTGTGTCTTGTAGGC	NA	False	NA	NA	False	NA	NA	NA	20748516	20524428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269
ENSMUSG00000086418.2_20524429_20749089_1	chr2	-	1906	6	NIC	ENSMUSG00000086418.2	novel	839	2	NA	NA	-31044	189757	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCTGTGTCTTGTAGGC	NA	False	NA	NA	False	NA	NA	NA	20749089	20524428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269
ENSMUSG00000086418.2_20524622_20749089_1	chr2	-	1713	6	NIC	ENSMUSG00000086418.2	novel	839	2	NA	NA	-31044	189564	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTCGGAAAGCTCGCAGA	NA	False	NA	NA	False	NA	NA	NA	20749089	20524621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269
ENSMUSG00000086421.2_118644713_118665021_1	chr2	-	1217	9	Genic_Genomic	ENSMUSG00000086421.2	novel	874	2	NA	NA	-418	15642	multi-exon	TRUE	non_canonical	0	0	junction_1	0	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGAGTCTGCCGCCGCGCT	NA	False	NA	NA	False	NA	NA	NA	118665021	118644712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ENSMUSG00000086421.2_118644713_118665128_1	chr2	-	1324	9	Genic_Genomic	ENSMUSG00000086421.2	novel	874	2	NA	NA	-525	15642	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGAGTCTGCCGCCGCGCT	NA	False	NA	NA	False	NA	NA	NA	118665128	118644712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ENSMUSG00000086429.10_113023288_113044857_1	chr6	-	1684	10	NIC	ENSMUSG00000086429.10	novel	551	3	NA	NA	9281	21101	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCGGAAACGGAAGTCAG	1313	False	NA	NA	False	NA	NA	NA	113044857	113023287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ENSMUSG00000086429.10_113023288_113045234_1	chr6	-	2061	10	NIC	ENSMUSG00000086429.10	novel	551	3	NA	NA	8904	21101	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCGGAAACGGAAGTCAG	936	False	NA	NA	False	NA	NA	NA	113045234	113023287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ENSMUSG00000086429.10_113023288_113045234_2	chr6	-	2044	10	NNC	ENSMUSG00000086429.10	novel	551	3	NA	NA	8904	21101	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCGGAAACGGAAGTCAG	936	False	NA	NA	False	NA	NA	NA	113045234	113023287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_113023335_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ENSMUSG00000086429.10_113023288_113045234_3	chr6	-	2241	11	NNC	ENSMUSG00000086429.10	novel	551	3	NA	NA	8904	21101	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCGGAAACGGAAGTCAG	936	False	NA	NA	False	NA	NA	NA	113045234	113023287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_113023352_113024375_113024666_113026299_113026378_113027717_113027898_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ENSMUSG00000086429.10_113047359_113054205_1	chr6	-	1109	2	FSM	ENSMUSG00000086429.10	ENSMUST00000159544.3	822	2	89	-376	-34	0	multi-exon	FALSE	canonical	3	30	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGAATGACTTTTTAAT	NA	False	NA	0	True	NA	NA	NA	113054205	113047358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_113048397_113054134
ENSMUSG00000086430.2_5025453_5051010_1	chr2	+	2001	12	Genic_Genomic	ENSMUSG00000086430.2	novel	1065	2	NA	NA	-16638	5066	multi-exon	FALSE	non_canonical	0	0	junction_1	0	398	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGAAGACCAGGAATGAG	NA	False	NA	NA	False	NA	NA	NA	5025452	5051010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_+_5026040_5026133_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797
ENSMUSG00000086434.2_42554962_42578455_1	chr10	-	2956	6	NIC	ENSMUSG00000086434.2	novel	410	2	NA	NA	-3941	19070	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATAGCTCGCCCGGTGCT	5200	False	NA	NA	False	NA	NA	NA	42578455	42554961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42574103_42574270_42576478
ENSMUSG00000086453.8_164588060_164610144_1	chr2	-	1124	13	Genic_Genomic	ENSMUSG00000086453.8	novel	490	5	NA	NA	1395	8102	multi-exon	FALSE	non_canonical	0	0	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGCCCGCGTCGCCCAG	3534	False	NA	NA	False	NA	NA	NA	164610144	164588059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
ENSMUSG00000086454.8_104389524_104391285_1	chr2	+	1421	3	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	0	-7110	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	77	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	104389523	104391285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104389830_104390068_104390321_104390422
ENSMUSG00000086454.8_104389524_104399270_1	chr2	+	1463	4	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	0	93	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_1	171.663106759205	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAGAAGTTTCCACTT	NA	False	NA	5	True	AAGAAA	-1	NA	104389523	104399270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104389830_104390068_104390321_104398205_104398836_104398995
ENSMUSG00000086454.8_104389524_104399270_10	chr2	+	1454	4	NNC	ENSMUSG00000086454.8	novel	677	3	NA	NA	0	93	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	222.40653467618	1086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAGAAGTTTCCACTT	NA	False	NA	5	True	AAGAAA	-1	NA	104389523	104399270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104389821_104390068_104390321_104398205_104398836_104398995
ENSMUSG00000086454.8_104389524_104399270_11	chr2	+	627	4	NIC	ENSMUSG00000086454.8	novel	582	4	NA	NA	0	93	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	244.852790241175	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAGAAGTTTCCACTT	NA	False	NA	5	True	AAGAAA	-1	NA	104389523	104399270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_104389552_104390068_104390321_104398205_104398278_104398995
ENSMUSG00000086454.8_104389524_104399270_12	chr2	+	1144	3	NIC	ENSMUSG00000086454.8	novel	677	3	NA	NA	0	93	intron_retention	FALSE	canonical	3	23	junction_2	277	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAGAAGTTTCCACTT	NA	False	NA	5	True	AAGAAA	-1	NA	104389523	104399270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_104390321_104398205_104398278_104398995
ENSMUSG00000086454.8_104389524_104399270_2	chr2	+	1623	3	FSM	ENSMUSG00000086454.8	ENSMUST00000146553.8	770	3	16	-869	0	93	multi-exon	FALSE	canonical	3	184	junction_1	196.5	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAGAAGTTTCCACTT	NA	False	NA	5	True	AAGAAA	-1	NA	104389523	104399270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_104389830_104390068_104390321_104398205
ENSMUSG00000086454.8_104389524_104399270_3	chr2	+	1862	2	FSM	ENSMUSG00000086454.8	ENSMUST00000127237.2	707	2	-280	-875	0	93	multi-exon	FALSE	canonical	3	577	junction_1	0	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAGAAGTTTCCACTT	NA	False	NA	5	True	AAGAAA	-1	NA	104389523	104399270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_104390321_104398205
ENSMUSG00000086454.8_104389524_104399270_4	chr2	+	1702	3	NNC	ENSMUSG00000086454.8	novel	677	3	NA	NA	0	93	intron_retention	FALSE	canonical	3	251	junction_2	163	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAGAAGTTTCCACTT	NA	False	NA	5	True	AAGAAA	-1	NA	104389523	104399270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104390321_104398205_104398836_104398995
ENSMUSG00000086454.8_104389524_104399270_5	chr2	+	1228	4	NNC	ENSMUSG00000086454.8	novel	677	3	NA	NA	0	93	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	214.187353086549	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAGAAGTTTCCACTT	NA	False	NA	5	True	AAGAAA	-1	NA	104389523	104399270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104389595_104390068_104390321_104398205_104398836_104398995
ENSMUSG00000086454.8_104389524_104399270_6	chr2	+	1185	4	NNC	ENSMUSG00000086454.8	novel	536	3	NA	NA	0	93	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	198.704694347052	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAGAAGTTTCCACTT	NA	False	NA	5	True	AAGAAA	-1	NA	104389523	104399270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104389552_104390068_104390321_104398205_104398836_104398995
ENSMUSG00000086454.8_104389524_104399270_7	chr2	+	1345	3	FSM	ENSMUSG00000086454.8	ENSMUST00000127350.2	536	3	-13	-796	0	93	multi-exon	FALSE	canonical	3	101	junction_1	238	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAGAAGTTTCCACTT	NA	False	NA	5	True	AAGAAA	-1	NA	104389523	104399270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_104389552_104390068_104390321_104398205
ENSMUSG00000086454.8_104389524_104399270_8	chr2	+	1614	3	NNC	ENSMUSG00000086454.8	novel	677	3	NA	NA	0	93	intron_retention	FALSE	canonical	3	36	junction_1	270.5	1108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAGAAGTTTCCACTT	NA	False	NA	5	True	AAGAAA	-1	NA	104389523	104399270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104389821_104390068_104390321_104398205
ENSMUSG00000086454.8_104389524_104399270_9	chr2	+	1389	4	NNC	ENSMUSG00000086454.8	novel	677	3	NA	NA	0	93	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	219.022068903265	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAGAAGTTTCCACTT	NA	False	NA	5	True	AAGAAA	-1	NA	104389523	104399270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_104389756_104390068_104390321_104398205_104398836_104398995
ENSMUSG00000086459.3_23440427_23447959_2	chr11	+	1072	9	Fusion	ENSMUSG00000056342.17_ENSMUSG00000086459.3	novel	555	3	NA	NA	3622	-687	multi-exon	FALSE	non_canonical	0	0	junction_1	0	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGGCCGCCCCGGCCA	NA	False	NA	NA	False	NA	NA	NA	23440426	23447959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr11_+_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ENSMUSG00000086495.8_90865972_90876074_1	chr2	-	1620	8	Genic_Genomic	ENSMUSG00000086495.8	novel	537	3	NA	NA	8189	8465	multi-exon	FALSE	non_canonical	0	0	junction_1	0	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTGGTTCAGCCCCTGT	NA	False	NA	NA	False	AAAAAG	-43	NA	90876074	90865971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
ENSMUSG00000086527.2_121179288_121203112_1	chr6	-	1574	5	NNC	ENSMUSG00000086527.2	novel	1162	2	NA	NA	0	21363	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTCCTGGAAGCCAAAG	NA	False	NA	NA	False	NA	NA	NA	121203112	121179287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_121179441_121197342_121197566_121198259_121198409_121199692_121200374_121202744
ENSMUSG00000086561.2_142406841_142450099_1	chr3	-	1674	14	NIC	ENSMUSG00000086561.2	novel	674	2	NA	NA	343	42581	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGCAGCAGGAACCCTC	NA	False	NA	NA	False	NA	NA	NA	142450099	142406840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_142406937_142412449_142412557_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ENSMUSG00000086561.2_142406841_142450288_1	chr3	-	1863	14	NIC	ENSMUSG00000086561.2	novel	674	2	NA	NA	154	42581	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGCAGCAGGAACCCTC	NA	False	NA	NA	False	NA	NA	NA	142450288	142406840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_142406937_142412449_142412557_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ENSMUSG00000086582.2_39569522_39576405_1	chr6	-	375	4	NNC	ENSMUSG00000086582.2	novel	388	2	NA	NA	-6687	-8496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	243	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCGTCACTTCCCCGAGT	NA	False	NA	NA	False	NA	NA	NA	39576405	39569521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_39569647_39573384_39573459_39575199_39575296_39576325
ENSMUSG00000086582.2_39569522_39576405_2	chr6	-	446	4	NIC	ENSMUSG00000086582.2	novel	388	2	NA	NA	-6687	-8496	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	5650	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCGTCACTTCCCCGAGT	NA	False	NA	NA	False	NA	NA	NA	39576405	39569521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_39569647_39573384_39573530_39575199_39575296_39576325
ENSMUSG00000086582.2_39569522_39576405_3	chr6	-	434	4	NNC	ENSMUSG00000086582.2	novel	388	2	NA	NA	-6687	-8496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1947	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCGTCACTTCCCCGAGT	NA	False	NA	NA	False	NA	NA	NA	39576405	39569521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_39569647_39573384_39573530_39575199_39575296_39576337
ENSMUSG00000086594.3_59307106_59320292_1	chr17	+	3545	7	Genic_Genomic	ENSMUSG00000086594.3	novel	939	4	NA	NA	3836	1159	multi-exon	FALSE	non_canonical	0	0	junction_1	0	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCAGCCTTCCGGACTT	NA	False	NA	NA	False	NA	NA	NA	59307105	59320292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_+_59309287_59310323_59310524_59313498_59313613_59314618_59314787_59316849_59317440_59318037_59318250_59320212
ENSMUSG00000086594.3_59309052_59320292_1	chr17	+	1599	7	Genic_Genomic	ENSMUSG00000086594.3	novel	939	4	NA	NA	5782	1159	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCAGCCTTCCGGACTT	NA	False	NA	NA	False	NA	NA	NA	59309051	59320292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_+_59309287_59310323_59310524_59313498_59313613_59314618_59314787_59316849_59317440_59318037_59318250_59320212
ENSMUSG00000086617.2_101501440_101507464_1	chr11	+	848	4	NNC	ENSMUSG00000086617.2	novel	472	3	NA	NA	0	682	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	2.05480466765633	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGCCTGTGGGGTTTT	NA	False	NA	7	True	AAAACA	-27	NA	101501439	101507464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_101501538_101501917_101502004_101506606_101506824_101507017
ENSMUSG00000086629.9_107878285_107930503_1	chrX	+	738	3	FSM	ENSMUSG00000086629.9	ENSMUST00000131640.8	546	3	22	-214	0	1	multi-exon	FALSE	canonical	3	8	junction_2	2.5	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTGTAACAGACAATGA	NA	False	NA	NA	False	AATAAA	-17	NA	107878284	107930503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_107878380_107879871_107879962_107929950
ENSMUSG00000086680.3_97096668_97171234_1	chr11	+	3987	23	NIC	ENSMUSG00000086680.3	novel	637	3	NA	NA	-74286	-2489	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	661	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGAGCAGGCGGCGAGC	NA	False	NA	NA	False	NA	NA	NA	97096667	97171234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ENSMUSG00000086680.3_97097329_97171234_1	chr11	+	3326	23	NIC	ENSMUSG00000086680.3	novel	637	3	NA	NA	-73625	-2489	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGAGCAGGCGGCGAGC	NA	False	NA	NA	False	NA	NA	NA	97097328	97171234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ENSMUSG00000086718.2_89084780_89090072_1	chr3	-	1483	9	NNC	ENSMUSG00000086718.2	novel	545	2	NA	NA	-472	3282	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1356	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTGAAACAACCGGAAGAG	4786	False	NA	NA	False	NA	NA	NA	89090072	89084779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_89084965_89085296_89085375_89086398_89086531_89086623_89086736_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ENSMUSG00000086718.2_89084780_89090072_2	chr3	-	1492	9	NIC	ENSMUSG00000086718.2	novel	545	2	NA	NA	-472	3282	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTGAAACAACCGGAAGAG	4786	False	NA	NA	False	NA	NA	NA	89090072	89084779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ENSMUSG00000086718.2_89084827_89090070_1	chr3	-	1443	9	NIC	ENSMUSG00000086718.2	novel	545	2	NA	NA	-470	3235	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCCTCCGGTGTGCTTG	4788	False	NA	NA	False	NA	NA	NA	89090070	89084826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ENSMUSG00000086725.2_29122890_29169667_1	chr11	-	3995	16	NIC	ENSMUSG00000086725.2	novel	2203	2	NA	NA	-46109	-1981	intron_retention	FALSE	non_canonical	0	0	junction_1	0	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCGAACACACTTCCGG	3074	False	NA	NA	False	GGGGCT	-35	NA	29169667	29122889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ENSMUSG00000086728.3_57018161_57035650_1	chr9	-	2235	7	NIC	ENSMUSG00000086728.3	novel	452	2	NA	NA	2532	-10927	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAACACCATTGTGCTTC	NA	False	NA	NA	False	ACTAAA	-27	NA	57035650	57018160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ENSMUSG00000086745.2_102627547_102634438_1	chr3	-	425	3	ISM	ENSMUSG00000086745.2	ENSMUST00000146624.2	590	4	8295	0	8295	0	3prime_fragment	FALSE	canonical	2	4	junction_1	3	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTTGAATTAGCAAATT	NA	False	NA	NA	False	NA	NA	NA	102634438	102627546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_102627764_102633643_102633728_102634314
ENSMUSG00000086748.2_10344094_10370046_1	chr2	-	640	4	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8806	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	238.302795246347	1491	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGTGTTCATTCTGT	NA	False	NA	-13	True	AATAAA	-14	NA	10370046	10344093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_10344284_10346331_10346540_10350061_10350197_10369939
ENSMUSG00000086748.2_10344094_10370046_2	chr2	-	701	5	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8806	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	256.084336693988	1546	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGTGTTCATTCTGT	NA	False	NA	-13	True	AATAAA	-14	NA	10370046	10344093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_10344284_10346331_10346540_10350061_10350197_10351920_10352011_10369968
ENSMUSG00000086748.2_10344094_10370046_4	chr2	-	615	4	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8806	0	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_3	186.111674957687	1454	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGTGTTCATTCTGT	NA	False	NA	-13	True	AATAAA	-14	NA	10370046	10344093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_10344284_10346331_10346540_10350061_10350197_10369964
ENSMUSG00000086753.2_123649967_123662196_1	chr5	+	1328	6	NNC	ENSMUSG00000086753.2	novel	1862	2	NA	NA	3509	10122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	164	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCCGGACGCACGCGCCG	8203	False	NA	NA	False	NA	NA	NA	123649966	123662196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_123650765_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUSG00000086753.2_123649967_123662196_2	chr5	+	1334	6	NIC	ENSMUSG00000086753.2	novel	1862	2	NA	NA	3509	10122	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCCGGACGCACGCGCCG	8203	False	NA	NA	False	NA	NA	NA	123649966	123662196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUSG00000086753.2_123650145_123662196_1	chr5	+	1156	6	NIC	ENSMUSG00000086753.2	novel	1862	2	NA	NA	3687	10122	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCCGGACGCACGCGCCG	8381	False	NA	NA	False	NA	NA	NA	123650144	123662196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUSG00000086767.2_149980740_150039494_1	chr4	+	3086	3	Genic_Genomic	ENSMUSG00000086767.2	novel	768	3	NA	NA	-7723	46888	multi-exon	FALSE	non_canonical	0	0	junction_1	0	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTAAGGTGGGAGGGCG	NA	False	NA	NA	False	AAAAAG	-9	NA	149980739	150039494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_149982799_149990872_149991715_150039309
ENSMUSG00000086816.2_46140987_46259159_1	chr19	-	3272	24	NIC	ENSMUSG00000086816.2	novel	892	3	NA	NA	-3051	111991	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAACTAGCCTCAGTCTAG	8552	False	NA	NA	False	NA	NA	NA	46259159	46140986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112
ENSMUSG00000086838.2_67815545_67878346_1	chr10	-	2464	12	NIC	ENSMUSG00000086838.2	novel	282	3	NA	NA	-15890	45735	intron_retention	TRUE	non_canonical	0	0	junction_1	0	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCGCTCGGCCGTACC	NA	False	NA	NA	False	NA	NA	NA	67878346	67815544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
ENSMUSG00000086841.2_62493703_62495633_1	chr11	+	457	5	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1876.6681912368	9149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_62493850_62494060_62494109_62494422_62494473_62495228_62495301_62495493
ENSMUSG00000086841.2_62493703_62495633_10	chr11	+	776	4	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	3662	junction_1	454.557904879993	674	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_62493850_62494060_62494473_62495228_62495293_62495480
ENSMUSG00000086841.2_62493703_62495633_11	chr11	+	600	3	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	410	junction_2	1626	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_62493850_62494060_62494109_62495228
ENSMUSG00000086841.2_62493703_62495633_12	chr11	+	673	4	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	3941	junction_3	324.165938302524	1518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_62494109_62494422_62494473_62495228_62495293_62495480
ENSMUSG00000086841.2_62493703_62495633_13	chr11	+	456	4	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2070.48416238006	1650	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_62493850_62494380_62494473_62495228_62495293_62495480
ENSMUSG00000086841.2_62493703_62495633_14	chr11	+	472	5	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	1867.01606849004	25015	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_62493860_62494060_62494109_62494422_62494473_62495228_62495293_62495480
ENSMUSG00000086841.2_62493703_62495633_15	chr11	+	434	4	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1795.66038610374	623	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_62493850_62494060_62494131_62495228_62495293_62495480
ENSMUSG00000086841.2_62493703_62495633_2	chr11	+	650	4	ISM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	0	0	0	0	intron_retention	FALSE	canonical	3	3662	junction_1	442.481135818868	717	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_62493850_62494060_62494109_62494422_62494473_62495228
ENSMUSG00000086841.2_62493703_62495633_3	chr11	+	444	5	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1876.6681912368	2910	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_62493850_62494060_62494109_62494422_62494473_62495228_62495293_62495498
ENSMUSG00000086841.2_62493703_62495633_4	chr11	+	439	4	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1795.66038610374	694	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_62493850_62494060_62494136_62495228_62495293_62495480
ENSMUSG00000086841.2_62493703_62495633_6	chr11	+	463	5	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1823.82763714119	21499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_62493850_62494060_62494124_62494436_62494473_62495228_62495293_62495480
ENSMUSG00000086841.2_62493703_62495633_7	chr11	+	1720	2	ISM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	0	0	0	0	intron_retention	FALSE	canonical	3	3662	junction_1	0	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_62493850_62494060
ENSMUSG00000086841.2_62493703_62495633_8	chr11	+	964	3	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	3662	junction_1	536.5	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_62493850_62494060_62494473_62495228
ENSMUSG00000086841.2_62493703_62495633_9	chr11	+	468	5	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1823.82763714119	26122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_62493850_62494060_62494115_62494422_62494473_62495228_62495293_62495480
ENSMUSG00000086841.2_62493905_62495633_1	chr11	+	471	4	ISM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	202	0	202	0	3prime_fragment	FALSE	canonical	3	3941	junction_3	324.165938302524	1249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493904	62495633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_62494109_62494422_62494473_62495228_62495293_62495480
ENSMUSG00000086841.2_62494063_62495633_1	chr11	+	313	4	ISM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	360	0	360	0	3prime_fragment	FALSE	canonical	3	3941	junction_3	324.165938302524	956	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62494062	62495633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_62494109_62494422_62494473_62495228_62495293_62495480
ENSMUSG00000086859.5_116969050_116969781_1	chr11	+	296	2	ISM	ENSMUSG00000086859.5	ENSMUST00000233355.2	1090	3	1436	-2	1422	0	3prime_fragment	FALSE	canonical	1	3	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCATTGTTCAAT	2316	False	NA	20	True	AATAAA	-16	NA	116969049	116969781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_116969166_116969601
ENSMUSG00000086877.8_20818162_20828217_1	chrX	+	575	7	NIC	ENSMUSG00000086877.8	novel	1144	6	NA	NA	-9761	-24745	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	3741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTATGAGCCGCGGCTT	NA	False	NA	NA	False	NA	NA	NA	20818161	20828217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ENSMUSG00000086877.8_20818162_20828217_2	chrX	+	620	7	NIC	ENSMUSG00000086877.8	novel	1144	6	NA	NA	-9761	-24745	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTATGAGCCGCGGCTT	NA	False	NA	NA	False	NA	NA	NA	20818161	20828217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827873_20828026_20828172
ENSMUSG00000086951.2_72132815_72157430_1	chr11	+	3274	12	NIC	ENSMUSG00000086951.2	novel	1516	3	NA	NA	-24432	-1953	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGCTAGAAGCTTCAC	NA	False	NA	NA	False	NA	NA	NA	72132814	72157430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848_72152978_72157289
ENSMUSG00000086951.2_72134214_72157430_1	chr11	+	1875	12	NIC	ENSMUSG00000086951.2	novel	1516	3	NA	NA	-23033	-1953	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGCTAGAAGCTTCAC	NA	False	NA	NA	False	NA	NA	NA	72134213	72157430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848_72152978_72157289
ENSMUSG00000086951.2_72150656_72157430_1	chr11	+	960	4	NIC	ENSMUSG00000086951.2	novel	1516	3	NA	NA	-6591	-1953	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGCTAGAAGCTTCAC	NA	False	NA	NA	False	NA	NA	NA	72150655	72157430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_72151209_72152438_72152576_72152848_72152978_72157289
ENSMUSG00000086968.9_107803162_107806002_1	chr3	-	920	8	NIC	ENSMUSG00000086968.9	novel	5407	3	NA	NA	-2473	-1717	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTCTATGCTCCACCCGC	NA	False	NA	NA	False	NA	NA	NA	107806002	107803161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_107803315_107803613_107803690_107803941_107804007_107804603_107804686_107804777_107804879_107805282_107805379_107805481_107805593_107805766
ENSMUSG00000086976.2_70503360_70505304_1	chr11	-	1348	5	Genic_Genomic	ENSMUSG00000086976.2	novel	406	2	NA	NA	-1267	-1322	multi-exon	FALSE	non_canonical	0	0	junction_1	0	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACGGAGTTCTTCAGGG	9325	False	NA	NA	False	CATAAA	-2	NA	70505304	70503359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_-_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ENSMUSG00000086993.2_97345902_97368086_1	chr7	-	1438	7	NNC	ENSMUSG00000086993.2	novel	706	2	NA	NA	-22051	-812	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4137	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCGGCTCGCACGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	97368086	97345901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_97346077_97354795_97354933_97360906_97361006_97361838_97361942_97363113_97363288_97365657_97365747_97367425
ENSMUSG00000086998.2_45946885_46035949_1	chr11	-	4096	23	NIC	ENSMUSG00000087607.2	novel	480	2	NA	NA	-108	87839	intron_retention	FALSE	non_canonical	0	0	junction_1	0	894	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCTAGCGGCGGCGGAG	NA	False	NA	NA	False	NA	NA	NA	46035949	45946884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ENSMUSG00000087009.2_30164839_30186660_1	chr7	-	2771	19	NIC	ENSMUSG00000087009.2	novel	1339	3	NA	NA	-21644	-3250	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAGGTGCCCTTCTCAA	8906	False	NA	NA	False	NA	NA	NA	30186660	30164838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ENSMUSG00000087026.8_85786726_85793753_1	chr8	-	1868	10	NIC	ENSMUSG00000087026.8	novel	2086	3	NA	NA	-6664	-6908	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGAGCCGCGTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	85793753	85786725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
ENSMUSG00000087030.2_62891382_62893246_1	chr10	-	366	2	NIC	ENSMUSG00000087030.2	novel	538	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCCTGTCTTTGATGT	NA	False	NA	NA	False	AATAAA	-17	NA	62893246	62891381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_62891640_62893138
ENSMUSG00000087050.2_77914421_77921365_1	chr11	-	2039	7	NIC	ENSMUSG00000087050.2	novel	2429	2	NA	NA	2126	6417	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGGGTACCAAACTCCTC	2013	False	NA	NA	False	NA	NA	NA	77921365	77914420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ENSMUSG00000087097.2_23539512_23553378_1	chr13	+	2605	4	NIC	ENSMUSG00000087097.2	novel	881	4	NA	NA	41817	-16591	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCCCGAGGCACGTAACT	4092	False	NA	NA	False	NA	NA	NA	23539511	23553378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_23541884_23546972_23547046_23552289_23552376_23553304
ENSMUSG00000087107.9_83115312_83117430_1	chr11	+	1217	2	ISM	ENSMUSG00000087107.9	ENSMUST00000143673.2	1428	4	910	0	337	0	3prime_fragment	FALSE	canonical	3	15	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGTATGTATGTATGTA	NA	False	NA	NA	False	NA	NA	NA	83115311	83117430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr11_+_83115458_83116359
ENSMUSG00000087138.2_44640646_44646994_1	chr7	+	1124	8	NNC	ENSMUSG00000087138.2	novel	899	3	NA	NA	4249	2973	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCAACCGCCCCAACGTC	NA	False	NA	NA	False	NA	NA	NA	44640645	44646994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_44640879_44642167_44642456_44643234_44643293_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ENSMUSG00000087138.2_44640646_44646994_2	chr7	+	974	6	NIC	ENSMUSG00000087138.2	novel	899	3	NA	NA	4249	2973	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCAACCGCCCCAACGTC	NA	False	NA	NA	False	NA	NA	NA	44640645	44646994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_44640879_44642167_44642456_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ENSMUSG00000087138.2_44640646_44646994_3	chr7	+	1066	7	NIC	ENSMUSG00000087138.2	novel	899	3	NA	NA	4249	2973	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCAACCGCCCCAACGTC	NA	False	NA	NA	False	NA	NA	NA	44640645	44646994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_44640879_44642167_44642456_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ENSMUSG00000087165.8_57686325_57692273_1	chr11	-	658	3	FSM	ENSMUSG00000087165.8	ENSMUST00000140069.2	502	3	-49	-107	-30	0	multi-exon	FALSE	canonical	3	13	junction_2	6.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCTTGTCTCAGTGATT	NA	False	NA	-3	True	NA	NA	NA	57692273	57686324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_57686621_57686851_57687000_57692059
ENSMUSG00000087166.10_98615030_98626717_1	chr4	+	3115	4	NIC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	192	junction_2	120.477752671972	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTACTTAATGTCCCT	NA	False	NA	32	True	NA	NA	NA	98615029	98626717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_98615078_98615631_98615708_98621359_98622316_98624682
ENSMUSG00000087166.10_98615030_98626717_2	chr4	+	3095	4	ISM	ENSMUSG00000087166.10	ENSMUST00000154279.3	2942	5	45	0	0	0	intron_retention	FALSE	canonical	3	363	junction_2	40.8765077873452	1506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTACTTAATGTCCCT	NA	False	NA	32	True	NA	NA	NA	98615029	98626717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr4_+_98615078_98615631_98615708_98621379_98622316_98624682
ENSMUSG00000087166.10_98615030_98626717_3	chr4	+	3073	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	184.711937892492	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTACTTAATGTCCCT	NA	False	NA	32	True	NA	NA	NA	98615029	98626717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_98615078_98615631_98615708_98621379_98622316_98624682_98625040_98625061
ENSMUSG00000087168.2_5062743_5073820_1	chr16	+	1392	8	Fusion	ENSMUSG00000039427.15_ENSMUSG00000087168.2	novel	1669	12	NA	NA	4805	11044	multi-exon	FALSE	non_canonical	0	0	junction_1	0	349	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGAAACGGGCGGAAGC	NA	False	NA	NA	False	NA	NA	NA	5062742	5073820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr16_+_5063250_5065340_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ENSMUSG00000087174.8_104087409_104113693_1	chrX	-	639	5	NIC	ENSMUSG00000087174.8	novel	709	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	44.3790491110389	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTGGATTTACATGTA	NA	False	NA	-3	True	AATAAA	-17	NA	104113693	104087408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_-_104087718_104110364_104110484_104112176_104112235_104113216_104113282_104113605
ENSMUSG00000087174.8_104087409_104113693_2	chrX	-	746	5	FSM	ENSMUSG00000087174.8	ENSMUST00000138460.8	3732	5	37	2949	0	0	multi-exon	FALSE	canonical	3	29	junction_1	38.5940409908058	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTGGATTTACATGTA	NA	False	NA	-3	True	AATAAA	-17	NA	104113693	104087408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_104087718_104110364_104110484_104112069_104112235_104113216_104113282_104113605
ENSMUSG00000087179.9_156672626_156681812_1	chr2	-	3108	4	NIC	ENSMUSG00000087179.9	novel	874	4	NA	NA	0	2343	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	55.3915356550279	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTTTCGTGTTTCCT	NA	False	NA	1	True	NA	NA	NA	156681812	156672625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_156675347_156679742_156679834_156680337_156680457_156681635
ENSMUSG00000087190.3_91722109_91728451_1	chr16	+	707	7	NIC	ENSMUSG00000087190.3	novel	1871	6	NA	NA	-6016	-31352	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	28958	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGGCTGTAGGTCAAACC	NA	False	NA	NA	False	NA	NA	NA	91722108	91728451	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727293_91728407
ENSMUSG00000087193.8_7915487_7937416_1	chrX	+	949	3	ISM	ENSMUSG00000087193.8	ENSMUST00000126286.8	1449	4	0	1782	0	-1064	5prime_fragment	FALSE	canonical	3	19	junction_1	28	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGCCGTGGCTCCCAG	7727	False	NA	3	True	NA	NA	NA	7915486	7937416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_7915823_7926454_7926526_7936874
ENSMUSG00000087193.8_7915487_7939198_1	chrX	+	1378	3	NIC	ENSMUSG00000087193.8	novel	1449	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	48	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGCCACTGGATTTT	7727	False	NA	29	True	TATAAA	-19	NA	7915486	7939198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_7915823_7936874_7937304_7938585
ENSMUSG00000087193.8_7917830_7937416_1	chrX	+	609	2	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	0	-1064	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGCCGTGGCTCCCAG	NA	False	NA	3	True	NA	NA	NA	7917829	7937416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_7917897_7936874
ENSMUSG00000087193.8_7917830_7937416_2	chrX	+	680	3	ISM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	0	1779	0	-1064	5prime_fragment	FALSE	canonical	3	56	junction_1	9.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGCCGTGGCTCCCAG	NA	False	NA	3	True	NA	NA	NA	7917829	7937416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chrX_+_7917897_7926454_7926526_7936874
ENSMUSG00000087193.8_7917830_7939031_2	chrX	+	942	3	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	0	-164	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	23	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGGCCTTAAGCTGCCT	NA	False	NA	NA	False	CATAAA	-20	NA	7917829	7939031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_7917897_7936874_7937304_7938585
ENSMUSG00000087193.8_7917830_7939198_1	chrX	+	1109	3	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	23	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGCCACTGGATTTT	NA	False	NA	29	True	TATAAA	-19	NA	7917829	7939198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_7917897_7936874_7937304_7938585
ENSMUSG00000087193.8_7917830_7939365_1	chrX	+	1276	3	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	0	167	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	23	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTCACTTTTAAAAATC	NA	False	NA	NA	False	ATTAAA	-14	NA	7917829	7939365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chrX_+_7917897_7936874_7937304_7938585
ENSMUSG00000087207.9_147314741_147418191_2	chr4	+	3048	6	Fusion	ENSMUSG00000087207.9_ENSMUSG00000078498.6	novel	585	4	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_3	204.124079912195	3213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	4110	False	NA	NA	False	NA	NA	NA	147314740	147418191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr4_+_147314893_147316807_147316901_147337753_147337859_147409230_147409335_147413438_147413566_147415724
ENSMUSG00000087249.2_59708621_59730578_1	chr11	+	1560	12	Fusion	ENSMUSG00000087249.2_ENSMUSG00000032615.15	novel	1316	5	NA	NA	7715	21261	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTAAGCTCGCGCGGGA	2251	False	NA	NA	False	NA	NA	NA	59708620	59730578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr11_+_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ENSMUSG00000087249.2_59708621_59730578_2	chr11	+	1555	12	Fusion	ENSMUSG00000087249.2_ENSMUSG00000032615.15	novel	1316	5	NA	NA	7715	21261	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTAAGCTCGCGCGGGA	2251	False	NA	NA	False	NA	NA	NA	59708620	59730578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr11_+_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727721_59727847_59730495
ENSMUSG00000087249.2_59708621_59730638_1	chr11	+	1688	12	Fusion	ENSMUSG00000087249.2_ENSMUSG00000032615.15	novel	1316	5	NA	NA	7715	21321	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2098	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTGGAGGCAGGTTGT	2251	False	NA	NA	False	AAAAAG	-36	NA	59708620	59730638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr11_+_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721134_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ENSMUSG00000087249.2_59708621_59730664_1	chr11	+	1641	12	Fusion	ENSMUSG00000087249.2_ENSMUSG00000032615.15	novel	1316	5	NA	NA	7715	21347	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2980	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCCGGCCAAGCGCCGCG	2251	False	NA	NA	False	ACTAAA	-24	NA	59708620	59730664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr11_+_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727721_59727847_59730495
ENSMUSG00000087253.2_21271673_21320478_1	chr11	+	2149	10	NIC	ENSMUSG00000087253.2	novel	2788	2	NA	NA	-48727	-3683	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGGTAAAACCAGACG	6673	False	NA	NA	False	NA	NA	NA	21271672	21320478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21320186
ENSMUSG00000087260.6_107186315_107191398_1	chr3	+	736	4	NNC	ENSMUSG00000087260.6	novel	743	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	535.8496887084	5641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTCATTTCTGGTCT	3151	False	NA	12	True	AATAAA	-16	NA	107186314	107191398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_107186430_107187192_107187248_107189224_107189343_107190950
ENSMUSG00000087288.2_133732721_133746152_1	chr4	+	1425	4	NIC	ENSMUSG00000087288.2	novel	664	2	NA	NA	-12737	-1028	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCCCCCGCACAATAGC	NA	False	NA	NA	False	NA	NA	NA	133732720	133746152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_133733633_133735221_133735407_133745363_133745561_133746021
ENSMUSG00000087291.2_3480373_3489295_1	chr11	+	1181	9	NIC	ENSMUSG00000087291.2	novel	3941	4	NA	NA	216	2439	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGCCAAGCTGTCCCAG	NA	False	NA	NA	False	NA	NA	NA	3480372	3489295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
ENSMUSG00000087307.2_123557021_123562521_1	chr4	+	392	3	NNC	ENSMUSG00000087307.2	novel	678	3	NA	NA	-2653	1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	3	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGCCGCCTTTTATTG	NA	False	NA	NA	False	NA	NA	NA	123557020	123562521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_123557174_123561406_123561541_123562416
ENSMUSG00000087307.2_123557088_123565010_1	chr4	+	519	3	NNC	ENSMUSG00000087307.2	novel	431	2	NA	NA	-2586	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	12.5	190	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGACCATTGTGGTTCAC	NA	False	NA	9	True	NA	NA	NA	123557087	123565010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_123557174_123561406_123561541_123564711
ENSMUSG00000087307.2_123557088_123565155_1	chr4	+	664	3	NNC	ENSMUSG00000087307.2	novel	431	2	NA	NA	-2586	145	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	12.5	240	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAAACCTCATTGGGCA	NA	False	NA	NA	False	GATAAA	-25	NA	123557087	123565155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_123557174_123561406_123561541_123564711
ENSMUSG00000087327.2_124689299_124693913_1	chr6	-	1313	9	NNC	ENSMUSG00000087327.2	novel	643	3	NA	NA	1881	3237	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4671	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATCGGCGGCCTTAGAGC	NA	False	NA	NA	False	NA	NA	NA	124693913	124689298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692135_124692551_124692623_124692916_124692994_124693568
ENSMUSG00000087332.2_99457737_99461961_1	chr4	+	1067	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	0	-713	0	713	multi-exon	TRUE	canonical	3	84	junction_1	0	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATAGCTGGTCTCTTCA	NA	False	NA	3	True	AATAAA	-24	NA	99457736	99461961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_99457876_99461033
ENSMUSG00000087332.2_99457737_99462703_1	chr4	+	1809	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	0	-1455	0	1455	multi-exon	FALSE	canonical	3	84	junction_1	0	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTTTGGCTGATGAA	NA	False	NA	NA	False	AATACA	-17	NA	99457736	99462703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_99457876_99461033
ENSMUSG00000087332.2_99457737_99462879_1	chr4	+	1985	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	0	-1631	0	1631	multi-exon	FALSE	canonical	3	84	junction_1	0	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTGCGAATGGATTAAG	NA	False	NA	5	True	AATAAA	-16	NA	99457736	99462879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_99457876_99461033
ENSMUSG00000087338.3_88814846_88832509_1	chr11	+	1640	9	Genic_Genomic	ENSMUSG00000087338.3	novel	811	5	NA	NA	18092	5622	multi-exon	FALSE	non_canonical	0	0	junction_1	0	546	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGATTCCTCAGGACGT	NA	False	NA	NA	False	NA	NA	NA	88814845	88832509	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88832324
ENSMUSG00000087338.3_88814846_88846291_1	chr11	+	2091	13	Genic_Genomic	ENSMUSG00000087338.3	novel	811	5	NA	NA	18092	19404	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3096	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCCCTGACACTCCT	NA	False	NA	NA	False	NA	NA	NA	88814845	88846291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835351_88837970_88838061_88843231_88843381_88846119
ENSMUSG00000087338.3_88814846_88846291_2	chr11	+	2096	13	Genic_Genomic	ENSMUSG00000087338.3	novel	811	5	NA	NA	18092	19404	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5000	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCCCTGACACTCCT	NA	False	NA	NA	False	NA	NA	NA	88814845	88846291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835351_88837965_88838061_88843231_88843381_88846119
ENSMUSG00000087338.3_88814846_88846291_3	chr11	+	2070	12	Genic_Genomic	ENSMUSG00000087338.3	novel	811	5	NA	NA	18092	19404	multi-exon	FALSE	non_canonical	0	0	junction_1	0	643	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCCCTGACACTCCT	NA	False	NA	NA	False	NA	NA	NA	88814845	88846291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88832098_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ENSMUSG00000087338.3_88814846_88846291_4	chr11	+	2092	13	Genic_Genomic	ENSMUSG00000087338.3	novel	811	5	NA	NA	18092	19404	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6469	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCCCTGACACTCCT	NA	False	NA	NA	False	NA	NA	NA	88814845	88846291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_88815551_88819990_88820150_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ENSMUSG00000087338.3_88814846_88846291_5	chr11	+	2087	13	Genic_Genomic	ENSMUSG00000087338.3	novel	811	5	NA	NA	18092	19404	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2809	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCCCTGACACTCCT	NA	False	NA	NA	False	NA	NA	NA	88814845	88846291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843241_88843381_88846119
ENSMUSG00000087338.3_88814846_88846291_6	chr11	+	2092	13	Genic_Genomic	ENSMUSG00000087338.3	novel	811	5	NA	NA	18092	19404	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2357	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCCCTGACACTCCT	NA	False	NA	NA	False	NA	NA	NA	88814845	88846291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827844_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ENSMUSG00000087338.3_88814846_88846291_8	chr11	+	2091	13	Genic_Genomic	ENSMUSG00000087338.3	novel	811	5	NA	NA	18092	19404	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2415	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCCCTGACACTCCT	NA	False	NA	NA	False	NA	NA	NA	88814845	88846291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827872_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ENSMUSG00000087338.3_88814846_88846291_9	chr11	+	2088	13	Genic_Genomic	ENSMUSG00000087338.3	novel	811	5	NA	NA	18092	19404	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2298	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCCCTGACACTCCT	NA	False	NA	NA	False	NA	NA	NA	88814845	88846291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832174_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ENSMUSG00000087338.3_88815087_88846291_1	chr11	+	1850	13	Genic_Genomic	ENSMUSG00000087338.3	novel	811	5	NA	NA	18333	19404	multi-exon	FALSE	non_canonical	0	0	junction_1	0	240	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCCCTGACACTCCT	NA	False	NA	NA	False	NA	NA	NA	88815086	88846291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835351_88837970_88838061_88843231_88843381_88846119
ENSMUSG00000087338.3_88815087_88846291_3	chr11	+	1851	13	Genic_Genomic	ENSMUSG00000087338.3	novel	811	5	NA	NA	18333	19404	multi-exon	FALSE	non_canonical	0	0	junction_1	0	252	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCCCTGACACTCCT	NA	False	NA	NA	False	NA	NA	NA	88815086	88846291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827844_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ENSMUSG00000087341.5_108587182_108600136_1	chr6	-	757	5	NNC	ENSMUSG00000087341.5	novel	544	4	NA	NA	-9180	112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.0656759649376	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAGAAGTCTTGTGTCA	NA	False	NA	-7	True	AATAAA	-14	NA	108600136	108587181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_108587583_108589268_108589394_108590092_108590176_108590909_108590955_108600033
ENSMUSG00000087341.5_108587182_108600136_2	chr6	-	772	5	NNC	ENSMUSG00000087341.5	novel	544	4	NA	NA	-9180	112	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	14.0779082253011	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAGAAGTCTTGTGTCA	NA	False	NA	-7	True	AATAAA	-14	NA	108600136	108587181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_108587583_108589268_108589374_108590092_108590176_108590909_108590955_108599998
ENSMUSG00000087341.5_108637590_108642893_1	chr6	-	2120	5	NIC	ENSMUSG00000087341.5	novel	1734	7	NA	NA	-4998	-50296	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGGGGCGGGCGGAG	NA	False	NA	NA	False	NA	NA	NA	108642893	108637589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
ENSMUSG00000087341.5_108637590_108643115_1	chr6	-	2342	5	NIC	ENSMUSG00000087341.5	novel	1734	7	NA	NA	-5220	-50296	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGGGGCGGGCGGAG	NA	False	NA	NA	False	NA	NA	NA	108643115	108637589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
ENSMUSG00000087341.5_108637590_108643734_1	chr6	-	2961	5	NIC	ENSMUSG00000087341.5	novel	1734	7	NA	NA	-5839	-50296	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	888	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGGGGCGGGCGGAG	NA	False	NA	NA	False	NA	NA	NA	108643734	108637589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
ENSMUSG00000087352.2_132257866_132260906_1	chr4	+	475	3	Genic_Genomic	ENSMUSG00000087352.2	novel	485	2	NA	NA	-2132	-6	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25565	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGCGTGGCTGCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	132257865	132260906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_132258135_132260606_132260699_132260792
ENSMUSG00000087352.2_132258073_132260906_1	chr4	+	268	3	Genic_Genomic	ENSMUSG00000087352.2	novel	485	2	NA	NA	-1925	-6	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1941	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGCGTGGCTGCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	132258072	132260906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_+_132258135_132260606_132260699_132260792
ENSMUSG00000087367.2_45736173_45738003_1	chr19	+	1157	5	NIC	ENSMUSG00000087367.2	novel	751	2	NA	NA	-1774	-2746	intron_retention	FALSE	non_canonical	0	0	junction_1	0	917	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGAGCGCCCCGCCCC	NA	False	NA	NA	False	NA	NA	NA	45736172	45738003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495
ENSMUSG00000087367.2_45736173_45738003_2	chr19	+	849	6	NNC	ENSMUSG00000087367.2	novel	751	2	NA	NA	-1774	-2746	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6517	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGAGCGCCCCGCCCC	NA	False	NA	NA	False	NA	NA	NA	45736172	45738003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495_45737582_45737889
ENSMUSG00000087367.2_45736173_45738003_3	chr19	+	864	6	NNC	ENSMUSG00000087367.2	novel	751	2	NA	NA	-1774	-2746	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	7563	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGAGCGCCCCGCCCC	NA	False	NA	NA	False	NA	NA	NA	45736172	45738003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_45736486_45736594_45736720_45736984_45737079_45737188_45737309_45737495_45737582_45737877
ENSMUSG00000087367.2_45736173_45738003_4	chr19	+	853	6	NNC	ENSMUSG00000087367.2	novel	751	2	NA	NA	-1774	-2746	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6254	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGAGCGCCCCGCCCC	NA	False	NA	NA	False	NA	NA	NA	45736172	45738003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495_45737574_45737877
ENSMUSG00000087377.2_132095277_132102841_1	chr2	+	483	3	NNC	ENSMUSG00000087377.2	novel	921	2	NA	NA	0	-412	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16	191	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGTTTCTAGAATGTCC	545	False	NA	NA	False	NA	NA	NA	132095276	132102841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_132095450_132102505_132102663_132102688
ENSMUSG00000087411.2_90357898_90362404_1	chr3	+	789	4	Genic_Genomic	ENSMUSG00000087411.2	novel	663	4	NA	NA	-992	-1998	multi-exon	FALSE	non_canonical	0	0	junction_1	0	964	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCCAATGCGCAAGCGC	NA	False	NA	NA	False	NA	NA	NA	90357897	90362404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_90358490_90358612_90358705_90362124_90362224_90362398
ENSMUSG00000087429.2_88269050_88283186_1	chr10	-	3441	9	Genic_Genomic	ENSMUSG00000087429.2	novel	342	3	NA	NA	-1390	11048	multi-exon	FALSE	non_canonical	0	0	junction_1	0	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGTCGCTGTAGGTCCC	NA	False	NA	NA	False	NA	NA	NA	88283186	88269049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr10_-_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ENSMUSG00000087435.2_30291949_30305538_1	chr2	+	2710	14	Genic_Genomic	ENSMUSG00000087435.2	novel	556	2	NA	NA	-11779	188	multi-exon	FALSE	non_canonical	0	0	junction_1	0	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTCACGGGGCGGAGCT	5524	False	NA	NA	False	NA	NA	NA	30291948	30305538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_+_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
ENSMUSG00000087439.2_110422161_110433985_1	chr5	+	983	5	NNC	ENSMUSG00000087439.2	novel	613	4	NA	NA	12126	8852	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1001	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCCCTCAGCGAGCCCGG	NA	False	NA	NA	False	NA	NA	NA	110422160	110433985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_110422495_110425520_110425641_110429062_110429248_110431511_110431620_110433749
ENSMUSG00000087439.2_110422161_110434058_1	chr5	+	1056	5	NNC	ENSMUSG00000087439.2	novel	613	4	NA	NA	12126	8925	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1026	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACCCTCTGCGCTCGC	NA	False	NA	NA	False	NA	NA	NA	110422160	110434058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_110422495_110425520_110425641_110429062_110429248_110431511_110431620_110433749
ENSMUSG00000087440.3_51162651_51184836_1	chr3	+	2886	7	Genic_Genomic	ENSMUSG00000087440.3	novel	1625	1	NA	NA	-21529	-968	multi-exon	FALSE	non_canonical	0	0	junction_1	0	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCTCCGACAGGAAGCGG	NA	False	NA	NA	False	NA	NA	NA	51162650	51184836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51184625
ENSMUSG00000087440.3_51162651_51184836_2	chr3	+	2850	7	Genic_Genomic	ENSMUSG00000087440.3	novel	1625	1	NA	NA	-21529	-968	multi-exon	FALSE	non_canonical	0	0	junction_1	0	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCTCCGACAGGAAGCGG	NA	False	NA	NA	False	NA	NA	NA	51162650	51184836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51184625
ENSMUSG00000087440.3_51163086_51184836_1	chr3	+	2451	7	Genic_Genomic	ENSMUSG00000087440.3	novel	1625	1	NA	NA	-21094	-968	multi-exon	FALSE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCTCCGACAGGAAGCGG	NA	False	NA	NA	False	NA	NA	NA	51163085	51184836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51184625
ENSMUSG00000087443.2_36172230_36176294_1	chr17	-	965	5	NNC	ENSMUSG00000087443.2	novel	784	2	NA	NA	1484	-420	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTGGCCCTGCCCAGG	NA	False	NA	NA	False	NA	NA	NA	36176294	36172229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_36172410_36174330_36174528_36175003_36175181_36175402_36175475_36175955
ENSMUSG00000087444.2_100290444_100320898_1	chr15	+	4430	16	NIC	ENSMUSG00000087444.2	novel	2608	2	NA	NA	-29584	-4458	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGACCCAGTCAACCTCCT	9550	False	NA	NA	False	NA	NA	NA	100290443	100320898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ENSMUSG00000087444.2_100292840_100320898_1	chr15	+	2034	16	NIC	ENSMUSG00000087444.2	novel	2608	2	NA	NA	-27188	-4458	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGACCCAGTCAACCTCCT	NA	False	NA	NA	False	NA	NA	NA	100292839	100320898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ENSMUSG00000087478.2_8502684_8516494_1	chr17	-	859	4	NNC	ENSMUSG00000087478.2	novel	1193	2	NA	NA	754	9514	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	361	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACCGCTGTGGACTCGGC	8371	False	NA	NA	False	NA	NA	NA	8516494	8502683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_8502794_8515366_8515464_8515655_8515789_8515975
ENSMUSG00000087528.2_129040721_129053536_1	chr2	-	3279	11	Fusion	ENSMUSG00000103009.2_ENSMUSG00000087528.2	novel	3362	9	NA	NA	-12422	-1549	intron_retention	FALSE	non_canonical	0	0	junction_1	0	951	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGCATGCCGCCGGCTC	2277	False	NA	NA	False	AAAACA	-28	NA	129053536	129040720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_-_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ENSMUSG00000087547.2_157437503_157439240_1	chr2	-	448	2	NNC	ENSMUSG00000087547.2	novel	629	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACATCTGGCCAAATATG	8707	False	NA	-13	True	NA	NA	NA	157439240	157437502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_157437906_157439195
ENSMUSG00000087549.2_31560746_31571362_1	chr2	-	1684	9	NIC	ENSMUSG00000087549.2	novel	794	4	NA	NA	7119	5630	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	79271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATGACTTGCGCAGGCG	NA	False	NA	NA	False	NA	NA	NA	31571362	31560745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_31560874_31562483_31562599_31564526_31564573_31564706_31564797_31565850_31565917_31566676_31566749_31568462_31568640_31569862_31569992_31570501
ENSMUSG00000087552.3_64066408_64088139_1	chr5	+	2782	4	Genic_Genomic	ENSMUSG00000087552.3	novel	481	2	NA	NA	-14836	5826	multi-exon	FALSE	non_canonical	0	0	junction_1	0	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAACACACAGAACCCAAG	NA	False	NA	NA	False	TTTAAA	-19	NA	64066407	64088139	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_64068495_64082077_64082217_64084331_64084569_64087820
ENSMUSG00000087552.3_64066408_64090106_1	chr5	+	2711	5	Genic_Genomic	ENSMUSG00000087552.3	novel	481	2	NA	NA	-14836	7793	multi-exon	FALSE	non_canonical	0	0	junction_1	0	403	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGATTAAGAAGAAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	64066407	64090106	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64089916
ENSMUSG00000087552.3_64066408_64126166_1	chr5	+	2999	7	Genic_Genomic	ENSMUSG00000087552.3	novel	481	2	NA	NA	-14836	43853	multi-exon	FALSE	non_canonical	0	0	junction_1	0	773	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGCTCGGCCCCCGCGA	NA	False	NA	NA	False	NA	NA	NA	64066407	64126166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
ENSMUSG00000087552.3_64066860_64126166_1	chr5	+	2547	7	Genic_Genomic	ENSMUSG00000087552.3	novel	481	2	NA	NA	-14384	43853	multi-exon	FALSE	non_canonical	0	0	junction_1	0	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGCTCGGCCCCCGCGA	NA	False	NA	NA	False	NA	NA	NA	64066859	64126166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
ENSMUSG00000087552.3_64068102_64126166_1	chr5	+	1305	7	Genic_Genomic	ENSMUSG00000087552.3	novel	481	2	NA	NA	-13142	43853	multi-exon	FALSE	non_canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGCTCGGCCCCCGCGA	NA	False	NA	NA	False	NA	NA	NA	64068101	64126166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
ENSMUSG00000087589.4_36601777_36722264_1	chr1	+	2405	16	Genic_Genomic	ENSMUSG00000087589.4	novel	910	3	NA	NA	4337	117570	multi-exon	FALSE	non_canonical	0	0	junction_1	0	353	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGCGCCCTCGGGTCGCGT	NA	False	NA	NA	False	NA	NA	NA	36601776	36722264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_36602102_36603410_36603564_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36695891_36696015_36698444_36698507_36699815_36700131_36721948
ENSMUSG00000087589.4_36601777_36722264_2	chr1	+	2282	15	Genic_Genomic	ENSMUSG00000087589.4	novel	910	3	NA	NA	4337	117570	multi-exon	FALSE	non_canonical	0	0	junction_1	0	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGCGCCCTCGGGTCGCGT	NA	False	NA	NA	False	NA	NA	NA	36601776	36722264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_36602102_36603410_36603564_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
ENSMUSG00000087590.3_33928134_33929042_1	chr18	+	244	3	FSM	ENSMUSG00000087590.3	ENSMUST00000146010.3	430	3	189	-3	142	3	multi-exon	FALSE	canonical	3	377	junction_1	24	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTATGTTGTGTGATT	NA	False	NA	18	True	AATAAA	-22	NA	33928133	33929042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_33928178_33928435_33928499_33928905
ENSMUSG00000087596.2_107057489_107080178_1	chr11	+	3069	18	NIC	ENSMUSG00000087596.2	novel	695	3	NA	NA	9255	22202	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	756	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGCGACCCCTGGCGG	NA	False	NA	NA	False	NA	NA	NA	107057488	107080178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ENSMUSG00000087596.2_107057753_107080178_1	chr11	+	2805	18	NIC	ENSMUSG00000087596.2	novel	695	3	NA	NA	9519	22202	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGCGACCCCTGGCGG	NA	False	NA	NA	False	NA	NA	NA	107057752	107080178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ENSMUSG00000087598.10_23897084_23907552_1	chr7	-	2668	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	22	3712	0	423	multi-exon	TRUE	canonical	3	37	junction_1	10.4986771653491	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTAGTCTTTTTTATTGT	NA	False	NA	NA	False	TATAAA	-30	NA	23907552	23897083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
ENSMUSG00000087601.4_66833585_66844577_1	chr5	-	992	9	NNC	ENSMUSG00000087601.4	novel	1685	5	NA	NA	-10736	-20450	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	587	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTGGAGCCGCCCAGGC	NA	False	NA	NA	False	AAAACA	-1	NA	66844577	66833584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_66833666_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184_66844316_66844337
ENSMUSG00000087601.4_66833585_66844577_2	chr5	-	1019	8	NNC	ENSMUSG00000087601.4	novel	1685	5	NA	NA	-10736	-20450	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1757	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTGGAGCCGCCCAGGC	NA	False	NA	NA	False	AAAACA	-1	NA	66844577	66833584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_66833683_66834298_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ENSMUSG00000087601.4_66833585_66844577_3	chr5	-	995	9	NNC	ENSMUSG00000087601.4	novel	1685	5	NA	NA	-10736	-20450	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.681030533919	3037	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTGGAGCCGCCCAGGC	NA	False	NA	NA	False	AAAACA	-1	NA	66844577	66833584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_66833683_66834298_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184_66844324_66844347
ENSMUSG00000087601.4_66833585_66844577_4	chr5	-	990	9	NNC	ENSMUSG00000087601.4	novel	1685	5	NA	NA	-10736	-20450	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.681030533919	4219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTGGAGCCGCCCAGGC	NA	False	NA	NA	False	AAAACA	-1	NA	66844577	66833584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_66833666_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184_66844324_66844347
ENSMUSG00000087606.2_139994444_140307307_1	chr5	+	2499	17	Genic_Genomic	ENSMUSG00000087606.2	novel	2253	3	NA	NA	-92510	213961	multi-exon	FALSE	non_canonical	0	0	junction_1	0	492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCGCCGGTGTCTATAT	NA	False	NA	NA	False	NA	NA	NA	139994443	140307307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ENSMUSG00000087610.2_96485188_96501475_1	chr3	+	1405	8	Genic_Genomic	ENSMUSG00000087610.2	novel	550	2	NA	NA	888	13496	multi-exon	FALSE	non_canonical	0	0	junction_1	0	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCCGCCTCCCCGAGCTC	NA	False	NA	NA	False	NA	NA	NA	96485187	96501475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96489403_96489572_96501399
ENSMUSG00000087610.2_96485188_96501475_2	chr3	+	1237	7	Genic_Genomic	ENSMUSG00000087610.2	novel	550	2	NA	NA	888	13496	multi-exon	FALSE	non_canonical	0	0	junction_1	0	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCCGCCTCCCCGAGCTC	NA	False	NA	NA	False	NA	NA	NA	96485187	96501475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96501399
ENSMUSG00000087651.4_83558790_83598157_2	chr10	+	659	6	NIC	ENSMUSG00000087651.4	novel	1194	6	NA	NA	0	130	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	34.6098251945889	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGCCTCTTGTCTTCA	NA	False	NA	8	True	CATAAA	-18	NA	83558789	83598157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_83558899_83573772_83573798_83593308_83593345_83593997_83594078_83595461_83595495_83597781
ENSMUSG00000087651.4_83558790_83598157_3	chr10	+	658	5	NNC	ENSMUSG00000087651.4	novel	1194	6	NA	NA	0	130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.1418169086865	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGCCTCTTGTCTTCA	NA	False	NA	8	True	CATAAA	-18	NA	83558789	83598157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_83558918_83593308_83593345_83593997_83594078_83595456_83595495_83597781
ENSMUSG00000087651.4_83558790_83598626_2	chr10	+	1127	5	NNC	ENSMUSG00000087651.4	novel	1194	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.1418169086865	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTCTTAATTATTT	NA	False	NA	6	True	ATTAAA	-19	NA	83558789	83598626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_83558918_83593308_83593345_83593997_83594078_83595456_83595495_83597781
ENSMUSG00000087651.4_83558790_83598626_3	chr10	+	1128	6	NIC	ENSMUSG00000087651.4	novel	1194	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	34.6098251945889	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTCTTAATTATTT	NA	False	NA	6	True	ATTAAA	-19	NA	83558789	83598626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_83558899_83573772_83573798_83593308_83593345_83593997_83594078_83595461_83595495_83597781
ENSMUSG00000087658.3_52135412_52139091_1	chr6	+	436	2	FSM	ENSMUSG00000087658.3	ENSMUST00000159006.2	253	2	-92	-91	0	-8	multi-exon	FALSE	canonical	3	38	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACTCCACTCGTCCTAG	NA	False	NA	51	True	NA	NA	NA	52135411	52139091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_52135667_52138910
ENSMUSG00000087675.2_119456717_119459872_1	chr11	+	583	3	NNC	ENSMUSG00000087675.2	novel	1705	4	NA	NA	17261	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	3	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAGAACTAACCTCACTG	2112	False	NA	NA	False	ATTAAA	-17	NA	119456716	119459872	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_119456892_119459088_119459263_119459638
ENSMUSG00000087687.4_3671551_3673372_1	chr8	+	330	4	FSM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	0	863	0	0	multi-exon	FALSE	canonical	3	539	junction_1	68.3715340376876	1911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTAGTGCCAAGTGTT	5587	False	NA	10	True	NA	NA	NA	3671550	3673372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_3671612_3672341_3672429_3672592_3672626_3673223
ENSMUSG00000087687.4_3671551_3673372_4	chr8	+	692	4	NNC	ENSMUSG00000087687.4	novel	363	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	310.762860643861	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTAGTGCCAAGTGTT	5587	False	NA	10	True	NA	NA	NA	3671550	3673372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_3671974_3672341_3672429_3672592_3672626_3673223
ENSMUSG00000087700.3_73973255_73996616_1	chr12	-	493	2	NIC	ENSMUSG00000087700.3	novel	1451	7	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCCTGTTTACTGTAT	NA	False	NA	NA	False	AATAAA	-11	NA	73996616	73973254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_73973529_73996397
ENSMUSG00000087703.2_35854524_35897377_1	chr5	+	4295	18	Genic_Genomic	ENSMUSG00000087703.2	novel	770	4	NA	NA	-25375	15548	multi-exon	FALSE	non_canonical	0	0	junction_1	0	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGATGAATGTCTCAGGC	NA	False	NA	NA	False	GGGGCT	-20	NA	35854523	35897377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897301
ENSMUSG00000088651.3_81545916_81579651_1	chr12	+	3420	4	Genic_Genomic	ENSMUSG00000088651.3	novel	121	1	NA	NA	-2098	31517	multi-exon	FALSE	non_canonical	0	0	junction_1	0	534	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCTCAGCGGTCAGAC	NA	False	NA	NA	False	NA	NA	NA	81545915	81579651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr12_+_81548941_81551317_81551414_81557602_81557740_81579489
ENSMUSG00000089663.2_22367051_22368793_1	chr16	+	914	4	NNC	ENSMUSG00000089663.2	novel	2507	2	NA	NA	-252	-1106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTATTAGACTCCGTG	NA	False	NA	NA	False	NA	NA	NA	22367050	22368793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_22367125_22367243_22367331_22367420_22367502_22368121
ENSMUSG00000089715.13_79716614_79718438_1	chr15	-	617	5	FSM	ENSMUSG00000089715.13	ENSMUST00000127721.8	546	5	88	-159	0	159	multi-exon	FALSE	canonical	1	2	junction_1	65.9445790038878	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGGTTTCTGGAATCC	NA	False	NA	NA	False	NA	NA	NA	79718438	79716613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79716959_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ENSMUSG00000089781.3_90527787_90576151_1	chr6	-	3125	23	NIC	ENSMUSG00000089781.3	novel	670	2	NA	NA	779	45892	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	593	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGGGTCAGTGCTCCTC	NA	False	NA	NA	False	NA	NA	NA	90576151	90527786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_90527953_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ENSMUSG00000089782.2_97876382_97877227_1	chr1	-	728	2	Genic_Genomic	ENSMUSG00000089782.2	novel	489	1	NA	NA	-113	244	multi-exon	FALSE	non_canonical	0	0	junction_1	0	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATGTA	8430	False	NA	NA	False	AATAAA	-44	NA	97877227	97876381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_-_97876691_97876808
ENSMUSG00000089847.9_105284831_105289558_1	chr7	+	1789	8	NIC	ENSMUSG00000089847.9	novel	3273	3	NA	NA	-4432	-933	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACATGCTCTCTGGGCAG	NA	False	NA	NA	False	NA	NA	NA	105284830	105289558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
ENSMUSG00000089847.9_105284831_105289558_2	chr7	+	1956	8	NIC	ENSMUSG00000089847.9	novel	3273	3	NA	NA	-4432	-933	intron_retention	FALSE	non_canonical	0	0	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACATGCTCTCTGGGCAG	NA	False	NA	NA	False	NA	NA	NA	105284830	105289558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_105285601_105286017_105286193_105286327_105286486_105286858_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
ENSMUSG00000089847.9_105289655_105291053_1	chr7	+	1090	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	392	1791	0	3	multi-exon	FALSE	canonical	3	351	junction_1	22.5	1482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGCTTTCTTGTCTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	105289654	105291053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_105289830_105289968_105290065_105290234
ENSMUSG00000089847.9_105289758_105290557_1	chr7	+	491	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	495	2287	0	2	multi-exon	FALSE	canonical	3	351	junction_1	22.5	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGTCTATGGGTACC	NA	False	NA	9	True	AATAAA	-18	NA	105289757	105290557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_105289830_105289968_105290065_105290234
ENSMUSG00000089847.9_105289758_105290557_2	chr7	+	661	2	FSM	ENSMUSG00000089847.9	ENSMUST00000151193.2	1083	2	-13	435	0	2	multi-exon	FALSE	canonical	3	351	junction_1	0	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGTCTATGGGTACC	NA	False	NA	9	True	AATAAA	-18	NA	105289757	105290557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_105289830_105289968
ENSMUSG00000089854.3_63459949_63579519_1	chr13	+	2119	12	Genic_Genomic	ENSMUSG00000021458.18_ENSMUSG00000089854.3	novel	2824	6	NA	NA	10862	91744	multi-exon	FALSE	non_canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGGGGCTGCGCGCGCG	NA	False	NA	NA	False	NA	NA	NA	63459948	63579519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63579263
ENSMUSG00000089876.4_69695216_69696307_1	chr11	-	1003	2	FSM	ENSMUSG00000089876.4	ENSMUST00000051025.5	1933	2	143	787	143	-787	multi-exon	FALSE	canonical	3	73	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGGAGGCTCCAAAGGCAT	NA	False	NA	NA	False	NA	NA	NA	69696307	69695215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69695757_69695845
ENSMUSG00000089876.4_69695216_69696450_1	chr11	-	1146	2	FSM	ENSMUSG00000089876.4	ENSMUST00000051025.5	1933	2	0	787	0	-787	multi-exon	FALSE	canonical	3	73	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGGAGGCTCCAAAGGCAT	NA	False	NA	NA	False	NA	NA	NA	69696450	69695215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69695757_69695845
ENSMUSG00000089902.2_69691967_69702190_1	chr2	-	2000	12	NIC	ENSMUSG00000051730.16	novel	968	7	NA	NA	2204	9575	intron_retention	FALSE	non_canonical	0	0	junction_1	0	6678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAAAGATGGGGGCTTTC	3330	False	NA	NA	False	NA	NA	NA	69702190	69691966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ENSMUSG00000089917.8_181210945_181223775_1	chr2	-	1762	14	NNC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	40.1066625225563	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCGTGTGGCAGAATGTA	4573	False	NA	-2	True	AATAAA	-20	NA	181223775	181210944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212099_181212196_181212292_181212349_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ENSMUSG00000089917.8_181210945_181223775_2	chr2	-	1828	14	NNC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	42.2748123983254	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCGTGTGGCAGAATGTA	4573	False	NA	-2	True	AATAAA	-20	NA	181223775	181210944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_181211184_181211260_181211418_181211488_181211597_181211689_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214853_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ENSMUSG00000089989.11_44775347_44775650_1	chr7	-	223	2	NNC	ENSMUSG00000074129.15	novel	464	4	NA	NA	311	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44775650	44775346	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_44775462_44775542
ENSMUSG00000089997.3_87689007_87699783_1	chr6	-	1230	7	ISM	ENSMUSG00000089997.3	ENSMUST00000238521.2	3678	16	0	36432	0	-36432	5prime_fragment	TRUE	canonical	3	8	junction_6	5.95585612840188	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTGTCCATCGACCCA	NA	False	NA	NA	False	ATTAAA	-17	NA	87699783	87689006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr6_-_87689250_87690283_87690357_87691104_87691249_87694858_87695064_87695769_87695958_87698819_87699089_87699675
ENSMUSG00000090000.3_77017741_77028422_1	chr18	+	488	3	FSM	ENSMUSG00000090000.3	ENSMUST00000026487.6	1402	3	28	886	0	37	multi-exon	FALSE	canonical	3	1641	junction_2	78	3154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTTTTTTTTTTTTTT	NA	False	NA	21	True	AATAAA	-18	NA	77017740	77028422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_77017913_77027263_77027366_77028208
ENSMUSG00000090015.9_110071510_110088804_1	chr5	+	449	3	ISM	ENSMUSG00000090015.9	ENSMUST00000112544.8	2417	4	244	2998	244	134	5prime_fragment	FALSE	canonical	3	75	junction_1	62	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACATCAATGCCAGGTGT	NA	False	NA	NA	False	NA	NA	NA	110071509	110088804	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_110071633_110088291_110088419_110088605
ENSMUSG00000090015.9_110071510_110091802_2	chr5	+	2173	4	FSM	ENSMUSG00000090015.9	ENSMUST00000112544.8	2417	4	244	0	244	0	multi-exon	FALSE	canonical	3	75	junction_1	50.6315667894601	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGCTATC	NA	False	NA	NA	False	NA	NA	NA	110071509	110091802	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940
ENSMUSG00000090026.2_111679720_111721487_1	chr12	-	665	6	NIC	ENSMUSG00000090026.2	novel	762	2	NA	NA	-23222	16808	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTACGGCAGGATCGCGAC	NA	False	NA	NA	False	NA	NA	NA	111721487	111679719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111717620_111717710_111721397
ENSMUSG00000090062.3_100589694_100618392_1	chr15	+	3831	12	Genic_Genomic	ENSMUSG00000090062.3	novel	726	3	NA	NA	-3960	15615	multi-exon	FALSE	non_canonical	0	0	junction_1	0	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCAAGTCCTGCGCAT	NA	False	NA	NA	False	GGGGCT	-12	NA	100589693	100618392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100618287
ENSMUSG00000090069.3_8164827_8198336_1	chr17	-	1527	8	NIC	ENSMUSG00000090069.3	novel	2050	3	NA	NA	-33078	-13236	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAACCCGAGGTTCCGCC	NA	False	NA	NA	False	NA	NA	NA	8198336	8164826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_8165136_8171380_8171469_8188978_8189121_8191655_8191802_8192768_8192973_8194876_8195040_8197549_8197637_8197948
ENSMUSG00000090075.2_19654654_19661688_1	chr7	+	494	2	FSM	ENSMUSG00000090075.2	ENSMUST00000162649.2	338	2	0	-156	0	156	multi-exon	FALSE	canonical	2	3	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGCCTTAATTTTTC	NA	False	NA	NA	False	AATAAA	-37	NA	19654653	19661688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_19654818_19661358
ENSMUSG00000090083.12_29833764_29860625_1	chr17	+	2064	8	FSM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	0	3340	0	2	multi-exon	FALSE	canonical	3	261	junction_5	10.0387006232919	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCAGCTGGGCTTCGG	NA	False	NA	18	True	AATAAA	-17	NA	29833763	29860625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ENSMUSG00000090083.12_29833864_29860509_1	chr17	+	1848	8	FSM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	100	3456	0	0	multi-exon	FALSE	canonical	3	261	junction_5	10.0387006232919	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGGTGTGAGTCCTGT	NA	False	NA	61	True	NA	NA	NA	29833863	29860509	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ENSMUSG00000090083.12_29833864_29860625_1	chr17	+	1964	8	FSM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	100	3340	0	2	multi-exon	FALSE	canonical	3	261	junction_5	10.0387006232919	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCAGCTGGGCTTCGG	NA	False	NA	18	True	AATAAA	-17	NA	29833863	29860625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ENSMUSG00000090110.9_74448452_74460190_1	chrX	-	813	4	NNC	ENSMUSG00000090110.9	novel	507	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	27.1825107171668	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	74460190	74448451	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_74448825_74453151_74453220_74459620_74459820_74460017
ENSMUSG00000090110.9_74448452_74460190_2	chrX	-	687	4	FSM	ENSMUSG00000090110.9	ENSMUST00000149863.3	507	4	0	-180	0	0	multi-exon	FALSE	canonical	3	61	junction_2	9.20144916122817	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	74460190	74448451	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_74448825_74453151_74453220_74459620_74459820_74460143
ENSMUSG00000090118.2_125563684_125589753_1	chr8	+	3692	8	Genic_Genomic	ENSMUSG00000090118.2	novel	1119	2	NA	NA	5247	-689	multi-exon	FALSE	non_canonical	0	0	junction_2	52.4890659167824	3829	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTTCCGCTTCCGGCGC	NA	False	NA	NA	False	NA	NA	NA	125563683	125589753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_125565620_125565704_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ENSMUSG00000090118.2_125566094_125589753_1	chr8	+	1133	7	Genic_Genomic	ENSMUSG00000090118.2	novel	1119	2	NA	NA	7657	-689	multi-exon	FALSE	non_canonical	0	0	junction_1	0	230	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTTCCGCTTCCGGCGC	NA	False	NA	NA	False	NA	NA	NA	125566093	125589753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125587792_125589638
ENSMUSG00000090118.2_125566094_125589753_2	chr8	+	1061	8	Genic_Genomic	ENSMUSG00000090118.2	novel	1119	2	NA	NA	7657	-689	multi-exon	FALSE	non_canonical	0	0	junction_1	0	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTTCCGCTTCCGGCGC	NA	False	NA	NA	False	NA	NA	NA	125566093	125589753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_125566155_125566460_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ENSMUSG00000090118.2_125566094_125589753_3	chr8	+	1358	7	Genic_Genomic	ENSMUSG00000090118.2	novel	1119	2	NA	NA	7657	-689	multi-exon	FALSE	non_canonical	0	0	junction_1	0	652	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTTCCGCTTCCGGCGC	NA	False	NA	NA	False	NA	NA	NA	125566093	125589753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_125566706_125567186_125567246_125568032_125568111_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ENSMUSG00000090136.5_37164218_37164665_1	chr9	+	269	2	Genic_Genomic	ENSMUSG00000090136.5	novel	444	1	NA	NA	0	4	multi-exon	FALSE	non_canonical	0	0	junction_1	0	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGGCAAGCTCAGTCG	NA	False	NA	NA	False	NA	NA	NA	37164217	37164665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_37164260_37164438
ENSMUSG00000090207.3_106765952_106769137_1	chr9	+	863	4	Genic_Genomic	ENSMUSG00000090207.3	novel	2289	1	NA	NA	-2794	-1895	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1828	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCGCACCCGGCGCGGTG	NA	False	NA	NA	False	NA	NA	NA	106765951	106769137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_106766420_106767359_106767502_106768269_106768398_106769012
ENSMUSG00000090247.8_128755783_128758895_1	chr10	-	700	3	ISM	ENSMUSG00000090247.8	ENSMUST00000026405.10	550	4	498	0	0	0	3prime_fragment	FALSE	canonical	3	559	junction_1	44.5	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTGTTTGAAGGAG	NA	False	NA	-1	True	AATAAA	-19	NA	128758895	128755782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr10_-_128755977_128756427_128756561_128758522
ENSMUSG00000090247.8_128755783_128759393_1	chr10	-	545	4	NNC	ENSMUSG00000090247.8	novel	550	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_3	281.193093008266	3068	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTGTTTGAAGGAG	NA	False	NA	-1	True	AATAAA	-19	NA	128759393	128755782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_128755977_128756427_128756561_128758522_128758591_128759243
ENSMUSG00000090258.8_76812349_76829957_1	chr12	+	446	5	NNC	ENSMUSG00000090258.8	novel	676	4	NA	NA	0	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	214.20317457965	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATGTTTTCTTTTCTA	NA	False	NA	12	True	AATGAA	-6	NA	76812348	76829957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586_76829733_76829928
ENSMUSG00000090258.8_76812349_76830068_1	chr12	+	557	5	NNC	ENSMUSG00000090258.8	novel	676	4	NA	NA	0	114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	214.20317457965	1769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGCTAGAGTGAGATGT	NA	False	NA	8	True	GATAAA	-18	NA	76812348	76830068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586_76829733_76829928
ENSMUSG00000090266.11_116734411_116736881_1	chr11	+	483	2	FSM	ENSMUSG00000090266.11	ENSMUST00000128784.2	585	2	24	78	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCCACCCCTCAGT	8975	False	NA	-54	True	NA	NA	NA	116734410	116736881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116734601_116736588
ENSMUSG00000090266.11_116734411_116740458_1	chr11	+	861	5	FSM	ENSMUSG00000090266.11	ENSMUST00000106370.10	1276	5	307	108	0	3	multi-exon	FALSE	canonical	3	104	junction_1	13.3603892158874	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAATGGGTATGAAGATGA	8975	False	NA	20	True	CATAAA	-20	NA	116734410	116740458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116734601_116739079_116739185_116739726_116739965_116740041_116740127_116740215
ENSMUSG00000090266.11_116734411_116740458_2	chr11	+	988	6	NIC	ENSMUSG00000090266.11	novel	1276	5	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	49.6733328859661	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAATGGGTATGAAGATGA	8975	False	NA	20	True	CATAAA	-20	NA	116734410	116740458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_+_116734601_116736644_116736772_116739079_116739185_116739726_116739965_116740041_116740127_116740215
ENSMUSG00000090266.11_116734411_116740566_1	chr11	+	969	5	FSM	ENSMUSG00000090266.11	ENSMUST00000106370.10	1276	5	307	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	13.3603892158874	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTACTCCCAATCATTAAA	8975	False	NA	15	True	ATTAAA	-17	NA	116734410	116740566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116734601_116739079_116739185_116739726_116739965_116740041_116740127_116740215
ENSMUSG00000090266.11_116734501_116740566_1	chr11	+	879	5	FSM	ENSMUSG00000090266.11	ENSMUST00000106370.10	1276	5	397	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	13.3603892158874	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTACTCCCAATCATTAAA	9065	False	NA	15	True	ATTAAA	-17	NA	116734500	116740566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116734601_116739079_116739185_116739726_116739965_116740041_116740127_116740215
ENSMUSG00000090317.2_78355490_78381288_1	chr9	-	2220	12	Genic_Genomic	ENSMUSG00000090317.2	novel	922	1	NA	NA	-25220	-343	multi-exon	FALSE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTGCGTCCAGCGACGC	NA	False	NA	NA	False	NA	NA	NA	78381288	78355489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_-_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
ENSMUSG00000090322.2_91226060_91248365_1	chr1	-	1770	12	NIC	ENSMUSG00000090322.2	novel	490	3	NA	NA	458	6754	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTCGGGTCCCGGAGT	3025	False	NA	NA	False	NA	NA	NA	91248365	91226059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_91226171_91228249_91228363_91230490_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91237518_91237626_91243210_91243248_91244785_91244870_91245313_91245414_91246759_91246836_91247798
ENSMUSG00000090327.2_110625526_110633379_1	chr12	-	2503	15	NIC	ENSMUSG00000090327.2	novel	411	2	NA	NA	-1537	5800	intron_retention	FALSE	non_canonical	0	0	junction_1	0	625	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGAAGTGGGGGACAG	NA	False	NA	NA	False	NA	NA	NA	110633379	110625525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ENSMUSG00000090374.2_63729796_63746217_1	chr14	+	1557	9	NIC	ENSMUSG00000090374.2	novel	453	4	NA	NA	-1352	8896	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	17557	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCAAGAGTTTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	63729795	63746217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ENSMUSG00000090459.2_32014881_32027353_1	chr14	-	589	3	Fusion	ENSMUSG00000090459.2_ENSMUSG00000115691.2	novel	391	2	NA	NA	-10422	0	multi-exon	FALSE	canonical	3	32	junction_1	10	326	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTCATTGACAAAGTTT	NA	False	NA	-13	True	ATTAAA	-17	NA	32027353	32014880	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr14_-_32015223_32016885_32016987_32027207
ENSMUSG00000090553.9_133531614_133538003_2	chr1	-	464	5	NNC	ENSMUSG00000090553.9	novel	503	5	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1852.68418450096	30522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACATTGTTTCATTCTG	NA	False	NA	-14	True	AATAAA	-25	NA	133538003	133531613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_133531815_133534238_133534306_133536630_133536698_133537455_133537483_133537901
ENSMUSG00000090553.9_133531614_133538003_3	chr1	-	418	4	NNC	ENSMUSG00000090553.9	novel	653	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	2129.83447452822	1147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACATTGTTTCATTCTG	NA	False	NA	-14	True	AATAAA	-25	NA	133538003	133531613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_133531815_133534238_133534318_133536634_133536698_133537928
ENSMUSG00000090553.9_133531614_133538003_4	chr1	-	463	4	NNC	ENSMUSG00000090553.9	novel	503	5	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2134.95688220837	19423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACATTGTTTCATTCTG	NA	False	NA	-14	True	AATAAA	-25	NA	133538003	133531613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_133531815_133534238_133534318_133536634_133536716_133537901
ENSMUSG00000090553.9_133531614_133538003_5	chr1	-	459	4	NNC	ENSMUSG00000090553.9	novel	653	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2134.95688220837	20273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACATTGTTTCATTCTG	NA	False	NA	-14	True	AATAAA	-25	NA	133538003	133531613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_133531815_133534238_133534318_133536634_133536698_133537887
ENSMUSG00000090564.10_21897247_21898975_1	chr14	+	1106	6	NIC	ENSMUSG00000090564.10	novel	2176	3	NA	NA	-399	-2133	intron_retention	TRUE	non_canonical	0	0	junction_1	0	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGTAGCGAGGATGGG	NA	False	NA	NA	False	NA	NA	NA	21897246	21898975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
ENSMUSG00000090608.2_123528722_123546627_1	chr9	+	1362	10	NIC	ENSMUSG00000090608.2	novel	2022	3	NA	NA	21561	16516	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACCGGGGCCTGAGGAAC	8121	False	NA	NA	False	NA	NA	NA	123528721	123546627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
ENSMUSG00000090625.2_174169550_174188537_1	chr2	-	1587	12	NIC	ENSMUSG00000090625.2	novel	1484	13	NA	NA	-32	2562	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTCCCCGCCGCGGAGC	NA	False	NA	NA	False	NA	NA	NA	174188537	174169549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_174169735_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000090625.2_174172080_174188537_1	chr2	-	1508	11	NIC	ENSMUSG00000090625.2	novel	1484	13	NA	NA	-32	32	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCGCGGCCGGGCTGCGG	NA	False	NA	NA	False	NA	NA	NA	174188537	174172079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_-_174172228_174176004_174176078_174183442_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000090641.3_67187521_67209236_1	chr13	-	3109	4	FSM	ENSMUSG00000090641.3	ENSMUST00000167565.3	3968	4	-2	861	-2	-861	multi-exon	FALSE	canonical	1	1	junction_3	4.10960933531265	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTATCAAAATATTTGG	NA	False	NA	NA	False	NA	NA	NA	67209236	67187520	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67190297_67192821_67192918_67200350_67200478_67209126
ENSMUSG00000090706.2_73380449_73420129_1	chr14	-	2125	15	NIC	ENSMUSG00000090706.2	novel	698	2	NA	NA	4632	30811	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAAGGGAGCGAGGGAA	NA	False	NA	NA	False	NA	NA	NA	73420129	73380448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ENSMUSG00000090706.2_73380602_73420129_1	chr14	-	1972	15	NIC	ENSMUSG00000090706.2	novel	698	2	NA	NA	4632	30658	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCAGCGGGGACTGCTCG	NA	False	NA	NA	False	NA	NA	NA	73420129	73380601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ENSMUSG00000090733.7_90119978_90120955_1	chr3	-	337	4	NNC	ENSMUSG00000090733.7	novel	345	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8818.28286383844	135275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTTTGTCTTGTTTAA	NA	False	NA	-6	True	AATAAA	-15	NA	90120955	90119977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_90120061_90120240_90120352_90120499_90120600_90120912
ENSMUSG00000090744.8_41193704_41210253_1	chr7	-	2838	4	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	0	1394	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	110.605404730309	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTTTCTTTTTTTTTTAA	NA	False	NA	-1	True	NA	NA	NA	41210253	41193703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_41196224_41197139_41197201_41197407_41197549_41210137
ENSMUSG00000090758.2_120563882_120600273_1	chr11	-	1756	16	NIC	ENSMUSG00000090758.2	novel	357	3	NA	NA	0	16090	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	791	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGCAGCCGGCTCGCCTC	NA	False	NA	NA	False	NA	NA	NA	120600273	120563881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000090758.2_120563882_120600273_2	chr11	-	1693	15	NIC	ENSMUSG00000090758.2	novel	357	3	NA	NA	0	16090	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGCAGCCGGCTCGCCTC	NA	False	NA	NA	False	NA	NA	NA	120600273	120563881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000090758.2_120564200_120600273_1	chr11	-	2069	16	NIC	ENSMUSG00000090758.2	novel	357	3	NA	NA	0	15772	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCCCCGGGACCCAGATC	NA	False	NA	NA	False	NA	NA	NA	120600273	120564199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_120564628_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000090758.2_120595987_120600273_1	chr11	-	559	5	NNC	ENSMUSG00000090758.2	novel	357	3	NA	NA	0	-16015	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGGGGCTTGGGGAG	NA	False	NA	NA	False	NA	NA	NA	120600273	120595986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_-_120596144_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000090841.3_128326732_128329726_1	chr10	-	402	5	NNC	ENSMUSG00000090841.3	novel	608	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1086.15638261716	1043	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTTCTTTCTTTCT	8242	False	NA	-7	True	AATAAA	-18	NA	128329726	128326731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_128326839_128328197_128328272_128328470_128328615_128329407_128329436_128329677
ENSMUSG00000090841.3_128326843_128329726_1	chr10	-	533	6	FSM	ENSMUSG00000090841.3	ENSMUST00000164181.2	665	6	18	114	0	0	multi-exon	FALSE	canonical	3	2189	junction_3	223.361948415571	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTGATTTCTGTGTGG	8242	False	NA	NA	False	NA	NA	NA	128329726	128326842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ENSMUSG00000090860.2_79690439_79700195_1	chr10	-	2849	13	Fusion	ENSMUSG00000035835.15_ENSMUSG00000091994.3	novel	3063	9	NA	NA	2920	-3053	intron_retention	FALSE	non_canonical	0	0	junction_1	0	805	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCCCGCGCGCGATCCTC	NA	False	NA	NA	False	NA	NA	NA	79700195	79690438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr10_-_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79698260_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000090860.2_79690439_79700195_2	chr10	-	2790	12	Fusion	ENSMUSG00000035835.15_ENSMUSG00000091994.3	novel	3063	9	NA	NA	2920	-3053	intron_retention	FALSE	non_canonical	0	0	junction_1	0	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCCCGCGCGCGATCCTC	NA	False	NA	NA	False	NA	NA	NA	79700195	79690438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr10_-_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79698241_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000090860.2_79690439_79700269_1	chr10	-	2935	14	Fusion	ENSMUSG00000035835.15_ENSMUSG00000091994.3	novel	3063	9	NA	NA	2846	-3053	intron_retention	FALSE	non_canonical	0	0	junction_1	0	4307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCCCGCGCGCGATCCTC	NA	False	NA	NA	False	NA	NA	NA	79700269	79690438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr10_-_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000090860.2_79690501_79700195_1	chr10	-	2799	14	Fusion	ENSMUSG00000035835.15_ENSMUSG00000091994.3	novel	3063	9	NA	NA	2920	-3115	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAACCGACCCAACGGC	NA	False	NA	NA	False	NA	NA	NA	79700195	79690500	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr10_-_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000090861.2_26359229_26377996_1	chr14	-	1682	6	NNC	ENSMUSG00000090861.2	novel	566	2	NA	NA	-18658	-9667	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.2	1710	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGAGCCCGCTACGCC	NA	False	NA	NA	False	NA	NA	NA	26377996	26359228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_26359642_26367813_26367895_26368068_26368179_26374260_26374301_26375025_26375118_26377050
ENSMUSG00000090861.2_26359229_26377996_2	chr14	-	1681	6	NNC	ENSMUSG00000090861.2	novel	566	2	NA	NA	-18658	-9667	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1555	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGAGCCCGCTACGCC	NA	False	NA	NA	False	NA	NA	NA	26377996	26359228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_26359642_26367813_26367895_26368068_26368179_26374260_26374304_26375029_26375118_26377050
ENSMUSG00000090861.2_26359229_26377996_3	chr14	-	1647	5	NNC	ENSMUSG00000090861.2	novel	566	2	NA	NA	-18658	-9667	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	308	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGAGCCCGCTACGCC	NA	False	NA	NA	False	NA	NA	NA	26377996	26359228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_26359642_26367813_26367895_26368068_26368179_26375020_26375118_26377050
ENSMUSG00000090861.2_26359229_26377996_4	chr14	-	1748	6	NIC	ENSMUSG00000090861.2	novel	566	2	NA	NA	-18658	-9667	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	3296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGAGCCCGCTACGCC	NA	False	NA	NA	False	NA	NA	NA	26377996	26359228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ENSMUSG00000090952.3_33965724_33979305_1	chr17	+	1569	5	NIC	ENSMUSG00000090952.3	novel	925	2	NA	NA	-13242	-1539	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCCGCGTAGAGCGGCGG	9636	False	NA	NA	False	NA	NA	NA	33965723	33979305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_33966788_33967483_33967565_33967840_33968035_33968755_33968877_33979196
ENSMUSG00000091021.2_132059234_132080944_1	chr4	+	2495	13	NIC	ENSMUSG00000091021.2	novel	1527	2	NA	NA	-19849	251	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACCCGCGCCGACGCAG	NA	False	NA	NA	False	NA	NA	NA	132059233	132080944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132075310_132075432_132079432_132079555_132079973_132080010_132080907
ENSMUSG00000091021.2_132079245_132080944_1	chr4	+	1281	2	NIC	ENSMUSG00000091021.2	novel	1527	2	NA	NA	162	251	intron_retention	FALSE	non_canonical	0	0	junction_1	0	2807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACCCGCGCCGACGCAG	3638	False	NA	NA	False	NA	NA	NA	132079244	132080944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_132079555_132079973
ENSMUSG00000091110.2_40986695_41010436_2	chr14	+	1977	5	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-14067	-336	at_least_one_novel_splicesite	TRUE	canonical	3	3	junction_3	8.44097150806707	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACC	NA	False	NA	NA	False	AATAAA	-15	NA	40986694	41010436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_40987404_41001646_41001810_41002809_41002942_41003619_41003802_41009645
ENSMUSG00000091119.3_3309983_3333038_1	chr15	-	717	6	NIC	ENSMUSG00000091119.3	novel	798	9	NA	NA	-30	126	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	10.2878569196893	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATTGCATTTATTTTG	8066	False	NA	NA	False	AATAAA	-20	NA	3333038	3309982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_3310232_3310504_3310589_3312299_3312428_3327582_3327689_3330586_3330676_3332977
ENSMUSG00000091133.2_69760168_69782454_1	chr13	-	2802	19	NIC	ENSMUSG00000091133.2	novel	2877	2	NA	NA	-19434	-1551	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	717	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGCACGCACGCTGCACT	NA	False	NA	NA	False	NA	NA	NA	69782454	69760167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ENSMUSG00000091154.3_27532626_27544596_1	chr8	-	1996	8	Genic_Genomic	ENSMUSG00000091154.3	novel	666	1	NA	NA	-11526	-216	multi-exon	FALSE	non_canonical	0	0	junction_1	0	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACCCGCGACTCACCGA	NA	False	NA	NA	False	NA	NA	NA	27544596	27532625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
ENSMUSG00000091154.3_27532626_27546160_1	chr8	-	2534	9	Genic_Genomic	ENSMUSG00000091154.3	novel	666	1	NA	NA	-13090	-216	multi-exon	FALSE	non_canonical	0	0	junction_1	0	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACCCGCGACTCACCGA	NA	False	NA	NA	False	NA	NA	NA	27546160	27532625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313_27544060_27545085
ENSMUSG00000091183.6_62915057_62933622_1	chr13	-	594	5	NNC	ENSMUSG00000091183.6	novel	358	2	NA	NA	0	4957	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	11.6081867662439	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATCTTCCTGAGAGACTA	NA	False	NA	NA	False	NA	NA	NA	62933622	62915056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_62915265_62915471_62915542_62924530_62924592_62924776_62924904_62933494
ENSMUSG00000091183.6_62920630_62933607_1	chr13	-	2648	4	FSM	ENSMUSG00000091183.6	ENSMUST00000201047.4	3279	4	15	616	-9	-616	multi-exon	FALSE	canonical	3	25	junction_3	2.05480466765633	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGGACCAGTTGT	NA	False	NA	3	True	NA	NA	NA	62933607	62920629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62922977_62924530_62924592_62924776_62924904_62933494
ENSMUSG00000091183.6_62922745_62933607_1	chr13	-	533	4	FSM	ENSMUSG00000091183.6	ENSMUST00000201047.4	3279	4	15	2731	-9	-1323	multi-exon	FALSE	canonical	3	25	junction_3	2.05480466765633	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCATGTCCCAGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	62933607	62922744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62922977_62924530_62924592_62924776_62924904_62933494
ENSMUSG00000091191.4_53660875_53668150_1	chr11	-	2103	10	Genic_Genomic	ENSMUSG00000091191.4	novel	3144	1	NA	NA	-4129	3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCGCGGCGCCGCGAAG	7845	False	NA	NA	False	NA	NA	NA	53668150	53660874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_-_53661105_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ENSMUSG00000091238.2_38376111_38411746_1	chr16	-	1896	10	Genic_Genomic	ENSMUSG00000091238.2	novel	549	2	NA	NA	-18084	13574	multi-exon	FALSE	non_canonical	0	0	junction_1	0	373	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGACCAACGCCCACATG	NA	False	NA	NA	False	NA	NA	NA	38411746	38376110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_-_38376146_38377506_38377590_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408670_38411273
ENSMUSG00000091238.2_38376111_38411746_2	chr16	-	1969	10	Genic_Genomic	ENSMUSG00000091238.2	novel	549	2	NA	NA	-18084	13574	multi-exon	FALSE	non_canonical	0	0	junction_1	0	419	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGACCAACGCCCACATG	NA	False	NA	NA	False	NA	NA	NA	38411746	38376110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_-_38376219_38377506_38377590_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408670_38411273
ENSMUSG00000091238.2_38379060_38411746_1	chr16	-	1759	8	Genic_Genomic	ENSMUSG00000091238.2	novel	549	2	NA	NA	-18084	10625	multi-exon	FALSE	non_canonical	0	0	junction_1	0	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTCAAATCCTGGGTCTA	NA	False	NA	NA	False	NA	NA	NA	38411746	38379059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_-_38379125_38384476_38384664_38393415_38393639_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408670_38411273
ENSMUSG00000091238.2_38383223_38411746_1	chr16	-	1840	9	Genic_Genomic	ENSMUSG00000091238.2	novel	549	2	NA	NA	-18084	6462	multi-exon	FALSE	non_canonical	0	0	junction_1	0	606	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGAGCTGAGGAGACGTG	NA	False	NA	NA	False	NA	NA	NA	38411746	38383222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_-_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUSG00000091264.4_41403650_41427453_1	chr13	+	1553	2	FSM	ENSMUSG00000091264.4	ENSMUST00000165561.4	4483	2	330	2600	330	-2600	multi-exon	FALSE	canonical	3	181	junction_1	0	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGGGCGATGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	41403649	41427453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_41403791_41426041
ENSMUSG00000091423.3_117357252_117409795_1	chr13	-	1323	9	Genic_Genomic	ENSMUSG00000091423.3	novel	2375	1	NA	NA	-52184	-2013	multi-exon	FALSE	non_canonical	0	0	junction_1	0	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGAGTGGGAGGGGCCC	NA	False	NA	NA	False	NA	NA	NA	117409795	117357251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_-_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
ENSMUSG00000091423.3_117357252_117410230_1	chr13	-	1758	9	Genic_Genomic	ENSMUSG00000091423.3	novel	2375	1	NA	NA	-52619	-2013	multi-exon	FALSE	non_canonical	0	0	junction_1	0	554	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGAGTGGGAGGGGCCC	NA	False	NA	NA	False	NA	NA	NA	117410230	117357251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_-_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
ENSMUSG00000091423.3_117357252_117410637_1	chr13	-	2165	9	Genic_Genomic	ENSMUSG00000091423.3	novel	2375	1	NA	NA	-53026	-2013	multi-exon	FALSE	non_canonical	0	0	junction_1	0	952	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGAGTGGGAGGGGCCC	NA	False	NA	NA	False	NA	NA	NA	117410637	117357251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_-_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
ENSMUSG00000091443.2_13127189_13154833_1	chr8	+	2229	14	Genic_Genomic	ENSMUSG00000091443.2	novel	448	3	NA	NA	1112	22093	multi-exon	FALSE	non_canonical	0	0	junction_1	0	897	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCACTTCCGGCGCAGGT	NA	False	NA	NA	False	NA	NA	NA	13127188	13154833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145873_13147607_13147669_13148562_13148637_13150324_13150415_13154774
ENSMUSG00000091443.2_13127518_13154833_1	chr8	+	1900	14	Genic_Genomic	ENSMUSG00000091443.2	novel	448	3	NA	NA	1441	22093	multi-exon	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCACTTCCGGCGCAGGT	NA	False	NA	NA	False	NA	NA	NA	13127517	13154833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145873_13147607_13147669_13148562_13148637_13150324_13150415_13154774
ENSMUSG00000091474.3_41248709_41277957_1	chr7	+	3959	7	NNC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	79.7191249882291	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGGTAATGAATTTCT	NA	False	NA	45	True	AATAAA	-27	NA	41248708	41277957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676_41277103_41277123
ENSMUSG00000091475.5_25789803_25793997_1	chr17	+	1311	2	FSM	ENSMUSG00000091475.5	ENSMUST00000163493.4	1802	2	471	20	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTGTCTGTCCTGCA	3203	False	NA	2	True	AATAAA	-5	NA	25789802	25793997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25790076_25792959
ENSMUSG00000091477.2_43735071_43788670_1	chr14	+	1289	3	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-45962	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	3	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTGGTATCACCCTA	NA	False	NA	NA	False	AATAAA	-42	NA	43735070	43788670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_43735407_43783111_43783244_43787849
ENSMUSG00000091490.4_43633578_43646921_1	chr8	+	2123	8	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	173.163365122096	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTGCATGTGTT	NA	False	NA	24	True	AATAAA	-15	NA	43633577	43646921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640023_43640749_43643105_43643129_43643305_43643407_43646239
ENSMUSG00000091490.4_43633578_43646921_2	chr8	+	1534	8	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	176.319052184571	2476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTGCATGTGTT	NA	False	NA	24	True	AATAAA	-15	NA	43633577	43646921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_43633650_43636163_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ENSMUSG00000091490.4_43633578_43646921_3	chr8	+	1599	9	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	193.213895398338	2456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTGCATGTGTT	NA	False	NA	24	True	AATAAA	-15	NA	43633577	43646921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_43633650_43635378_43635439_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ENSMUSG00000091490.4_43633578_43646921_4	chr8	+	1530	7	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	181.358760472165	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTGCATGTGTT	NA	False	NA	24	True	AATAAA	-15	NA	43633577	43646921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643291_43643407_43646239
ENSMUSG00000091512.6_137624267_137634526_1	chr3	+	1301	7	NNC	ENSMUSG00000091512.6	novel	1295	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	113.98745057632	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTGTATAGGCCT	60	False	NA	2	True	AATAAA	-22	NA	137624266	137634526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_137624411_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
ENSMUSG00000091512.6_137624267_137634526_2	chr3	+	697	7	NNC	ENSMUSG00000091512.6	novel	1295	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	103.238666313655	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTGTATAGGCCT	60	False	NA	2	True	AATAAA	-22	NA	137624266	137634526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137634325
ENSMUSG00000091512.6_137624287_137634526_1	chr3	+	1259	7	FSM	ENSMUSG00000091512.6	ENSMUST00000197064.5	733	7	20	-546	0	0	multi-exon	FALSE	canonical	2	2	junction_1	115.993773779266	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTGTATAGGCCT	80	False	NA	2	True	AATAAA	-22	NA	137624286	137634526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_137624389_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
ENSMUSG00000091514.3_26254566_26275226_1	chr8	+	4787	5	NIC	ENSMUSG00000091514.3	novel	2322	2	NA	NA	10058	15494	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCCCACGACCGTCCCAT	NA	False	NA	NA	False	NA	NA	NA	26254565	26275226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ENSMUSG00000091514.3_26257222_26275226_1	chr8	+	2131	5	NIC	ENSMUSG00000091514.3	novel	2322	2	NA	NA	12714	15494	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCCCACGACCGTCCCAT	NA	False	NA	NA	False	NA	NA	NA	26257221	26275226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ENSMUSG00000091514.3_26257222_26275315_1	chr8	+	2220	5	NIC	ENSMUSG00000091514.3	novel	2322	2	NA	NA	12714	15583	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGCCGGTCCCGCCCCTTG	NA	False	NA	NA	False	NA	NA	NA	26257221	26275315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ENSMUSG00000091537.3_108907056_108911446_1	chr9	-	634	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	209	101	0	-101	multi-exon	FALSE	canonical	3	4656	junction_3	487.196743284134	17555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTGTGTGTGCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	108911446	108907055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
ENSMUSG00000091537.3_108907056_108911446_2	chr9	-	628	4	NNC	ENSMUSG00000091537.3	novel	944	4	NA	NA	0	-101	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	2344.67003127424	17459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTGTGTGTGCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	108911446	108907055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_108907488_108911069_108911158_108911238_108911295_108911394
ENSMUSG00000091537.3_108907254_108911446_1	chr9	-	430	4	NNC	ENSMUSG00000091537.3	novel	944	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	2344.67003127424	3076	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAACTTTTGTAAAAAAA	NA	False	NA	NA	False	AATGAA	-30	NA	108911446	108907253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_108907488_108911069_108911158_108911238_108911295_108911394
ENSMUSG00000091537.3_108907254_108911446_2	chr9	-	436	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	209	299	0	0	multi-exon	FALSE	canonical	3	4656	junction_3	487.196743284134	4343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAACTTTTGTAAAAAAA	NA	False	NA	NA	False	AATGAA	-30	NA	108911446	108907253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
ENSMUSG00000091586.3_32725436_32749132_1	chr17	+	2957	13	FSM	ENSMUSG00000091586.3	ENSMUST00000165999.2	1693	13	0	-1264	0	15	multi-exon	FALSE	canonical	2	14	junction_12	8.54725426997206	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAATTACTTAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	32725435	32749132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747333_32747690
ENSMUSG00000091623.3_100108862_100126799_1	chr5	+	1044	7	Genic_Genomic	ENSMUSG00000091623.3	novel	2011	2	NA	NA	-16683	-723	multi-exon	FALSE	non_canonical	0	0	junction_1	0	630	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGAAGAACGGCGCGTCC	NA	False	NA	NA	False	NA	NA	NA	100108861	100126799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126747
ENSMUSG00000091705.9_35562107_35565738_1	chr17	+	1603	5	NIC	ENSMUSG00000091705.9	novel	1150	5	NA	NA	889	0	combination_of_known_splicesites	TRUE	canonical	1	3	junction_4	2.23606797749979	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTTGTTTCTGTT	5769	False	NA	NA	False	NA	NA	NA	35562106	35565738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_35562365_35563730_35564007_35564133_35564251_35564429_35564463_35564819
ENSMUSG00000091709.2_74668723_74671664_1	chr15	+	620	4	Genic_Genomic	ENSMUSG00000091709.2	novel	1630	3	NA	NA	12809	-825	multi-exon	FALSE	non_canonical	0	0	junction_1	0	628	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGCGAAGTCGGAGACT	NA	False	NA	NA	False	NA	NA	NA	74668722	74671664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_74669121_74670383_74670483_74671267_74671345_74671618
ENSMUSG00000091735.3_106331098_106341211_1	chr9	-	1978	13	Genic_Genomic	ENSMUSG00000091735.3	novel	1977	1	NA	NA	1926	10063	multi-exon	FALSE	non_canonical	0	0	junction_1	0	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGTTTGACAGGCGCGG	NA	False	NA	NA	False	NA	NA	NA	106341211	106331097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_-_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ENSMUSG00000091768.2_55253124_55282638_1	chr13	-	3349	7	NIC	ENSMUSG00000091768.2	novel	39	2	NA	NA	-1277	27651	intron_retention	TRUE	non_canonical	0	0	junction_1	0	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCGGCCTGCTACCACGA	NA	False	NA	NA	False	NA	NA	NA	55282638	55253123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55278346_55278441_55280119
ENSMUSG00000091780.4_89239966_89257030_2	chr15	-	3273	20	NIC	ENSMUSG00000022615.8	novel	2037	11	NA	NA	4212	16168	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCGGAAGTACGTAGCCA	NA	False	NA	NA	False	NA	NA	NA	89257030	89239965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUSG00000091803.8_81405800_81531869_1	chr12	-	743	5	FSM	ENSMUSG00000091803.8	ENSMUST00000166723.8	579	5	-22	-142	-10	0	multi-exon	FALSE	canonical	1	1	junction_1	163.084908866517	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTCTCAGTGTTCC	1013	False	NA	-46	True	AATAAA	-19	NA	81531869	81405799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_81406119_81421191_81421282_81521360_81521424_81527704_81527777_81531670
ENSMUSG00000091803.8_81518869_81531869_1	chr12	-	591	4	FSM	ENSMUSG00000091803.8	ENSMUST00000002757.11	2007	4	25	1391	-10	0	multi-exon	FALSE	canonical	3	142	junction_1	95.530099968544	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGTATGCTTTTCAGT	1013	False	NA	-8	True	ATTAAA	-12	NA	81531869	81518868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_81519126_81521360_81521424_81527704_81527777_81531670
ENSMUSG00000091896.9_35904641_35938669_1	chr18	+	898	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	30	1552	0	0	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAAGTCCTTTTGATTT	NA	False	NA	-9	True	AATAAA	-20	NA	35904640	35938669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
ENSMUSG00000091896.9_35904641_35939490_1	chr18	+	1719	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	30	731	0	617	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGAATAGGCTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	35904640	35939490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
ENSMUSG00000091908.8_57701969_57744062_1	chr9	+	938	5	Genic_Genomic	ENSMUSG00000091908.8	novel	663	4	NA	NA	16821	2484	multi-exon	FALSE	non_canonical	0	0	junction_1	0	50	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGGCGGGGCCCGCAC	4354	False	NA	NA	False	NA	NA	NA	57701968	57744062	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_57702318_57703389_57703636_57703754_57703916_57741431_57741516_57743964
ENSMUSG00000091931.6_102719534_102724062_1	chr12	-	953	3	NNC	ENSMUSG00000091931.6	novel	1152	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	118.5	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTTCTGTAGCCTCTT	6359	False	NA	-1	True	AATAAA	-20	NA	102724062	102719533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_102719714_102719915_102720426_102723799
ENSMUSG00000091931.6_102719719_102724062_1	chr12	-	970	2	FSM	ENSMUSG00000091931.6	ENSMUST00000173969.2	1152	2	-3	185	0	-185	multi-exon	FALSE	canonical	3	237	junction_1	0	8071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCGTTGAATCAAATGGT	6359	False	NA	NA	False	NA	NA	NA	102724062	102719718	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_102720426_102723799
ENSMUSG00000091957.4_61392079_61393058_1	chr18	-	504	2	Genic_Genomic	ENSMUSG00000091957.4	novel	965	1	NA	NA	-15	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGACCTGCAGAGATGG	7408	False	NA	NA	False	NA	NA	NA	61393058	61392078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_-_61392394_61392869
ENSMUSG00000092074.3_6360819_6367709_1	chr17	-	403	4	NNC	ENSMUSG00000092074.3	novel	3321	5	NA	NA	-16	-2550	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2200.72366885683	1781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6367709	6360818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_6361021_6362009_6362108_6365191_6365234_6367648
ENSMUSG00000092074.3_6360819_6367709_2	chr17	-	705	5	FSM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	66	2550	-16	-2550	multi-exon	TRUE	canonical	3	2579	junction_4	2048.76394138027	9806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6367709	6360818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6367648
ENSMUSG00000092074.3_6360819_6371876_1	chr17	-	796	5	Fusion	ENSMUSG00000118494.2_ENSMUSG00000092074.3	novel	3321	5	NA	NA	135	-2550	multi-exon	FALSE	canonical	3	145	junction_4	3028.61844534765	2142	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6371876	6360818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6371724
ENSMUSG00000092134.2_134012932_134243744_1	chr6	-	2061	9	NIC	ENSMUSG00000092134.2	novel	1394	4	NA	NA	-23070	197189	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGGGGGAGGGGGGGCTC	5065	False	NA	NA	False	NA	NA	NA	134243744	134012931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_134013102_134043269_134043429_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
ENSMUSG00000092203.8_35169218_35171448_1	chr17	-	414	3	NNC	ENSMUSG00000092203.8	novel	434	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAATAGACTTTTTCTG	6006	False	NA	NA	False	AATAAA	-15	NA	35171448	35169217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35169452_35171090_35171150_35171327
ENSMUSG00000092203.8_35169218_35171448_10	chr17	-	455	4	NNC	ENSMUSG00000092203.8	novel	434	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	36.0030862874591	1362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAATAGACTTTTTCTG	6006	False	NA	NA	False	AATAAA	-15	NA	35171448	35169217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35169452_35170860_35170902_35171090_35171150_35171327
ENSMUSG00000092203.8_35169218_35171448_11	chr17	-	794	4	NIC	ENSMUSG00000092203.8	novel	579	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	94	junction_3	41.9947086613963	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAATAGACTTTTTCTG	6006	False	NA	NA	False	AATAAA	-15	NA	35171448	35169217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_35169452_35169673_35169824_35170860_35171150_35171327
ENSMUSG00000092203.8_35169218_35171448_2	chr17	-	578	5	NNC	ENSMUSG00000092203.8	novel	579	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	67.7509225029446	4719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAATAGACTTTTTCTG	6006	False	NA	NA	False	AATAAA	-15	NA	35171448	35169217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35169452_35169673_35169818_35170860_35170902_35171111_35171150_35171327
ENSMUSG00000092203.8_35169218_35171448_3	chr17	-	564	4	NNC	ENSMUSG00000092203.8	novel	579	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.5686076250495	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAATAGACTTTTTCTG	6006	False	NA	NA	False	AATAAA	-15	NA	35171448	35169217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35169452_35169673_35169824_35171090_35171150_35171327
ENSMUSG00000092203.8_35169218_35171448_4	chr17	-	428	3	NNC	ENSMUSG00000092203.8	novel	579	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAATAGACTTTTTCTG	6006	False	NA	NA	False	AATAAA	-15	NA	35171448	35169217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35169452_35170860_35170902_35171295
ENSMUSG00000092203.8_35169218_35171448_5	chr17	-	1843	3	FSM	ENSMUSG00000092203.8_ENSMUSG00000093009.3	ENSMUST00000174173.2	635	3	-4	-1204	-1	0	multi-exon	FALSE	canonical	3	94	junction_2	10.5	588	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAATAGACTTTTTCTG	6006	False	NA	NA	False	AATAAA	-15	NA	35171448	35169217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35170902_35171111_35171150_35171327
ENSMUSG00000092203.8_35169218_35171448_6	chr17	-	369	5	NNC	ENSMUSG00000092203.8	novel	579	5	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	45.4223238066922	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAATAGACTTTTTCTG	6006	False	NA	NA	False	AATAAA	-15	NA	35171448	35169217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35169281_35169345_35169452_35170860_35170902_35171111_35171150_35171327
ENSMUSG00000092203.8_35169218_35171448_7	chr17	-	578	4	NNC	ENSMUSG00000092203.8	novel	747	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.8888096369862	2759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAATAGACTTTTTCTG	6006	False	NA	NA	False	AATAAA	-15	NA	35171448	35169217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35169452_35169673_35169824_35170860_35170902_35171295
ENSMUSG00000092203.8_35169218_35171448_8	chr17	-	561	4	NNC	ENSMUSG00000092203.8	novel	747	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.8888096369862	1888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAATAGACTTTTTCTG	6006	False	NA	NA	False	AATAAA	-15	NA	35171448	35169217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35169452_35169673_35169824_35170860_35170902_35171312
ENSMUSG00000092203.8_35169218_35171448_9	chr17	-	546	4	NIC	ENSMUSG00000092203.8	novel	579	5	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	76.6072233321811	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAATAGACTTTTTCTG	6006	False	NA	NA	False	AATAAA	-15	NA	35171448	35169217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_35169452_35169673_35169824_35170860_35170902_35171327
ENSMUSG00000092260.8_70194565_70202612_1	chr8	-	2015	4	FSM	ENSMUSG00000092260.8	ENSMUST00000130458.8	2291	4	0	276	0	-276	multi-exon	FALSE	canonical	3	15	junction_3	1.24721912892465	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAAGTCACTCTGTCGTC	9672	False	NA	NA	False	NA	NA	NA	70202612	70194564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70196261_70196841_70196903_70197110_70197238_70202481
ENSMUSG00000092335.2_42226955_42241971_1	chr7	-	3677	4	FSM	ENSMUSG00000092335.2_ENSMUSG00000108446.2	ENSMUST00000173283.2	1425	4	0	-2252	0	2252	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTGTTTTTCTTATCT	NA	False	NA	-2	True	AGTAAA	-24	NA	42241971	42226954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
ENSMUSG00000092335.2_42226955_42241971_2	chr7	-	3550	3	Fusion	ENSMUSG00000092335.2_ENSMUSG00000108446.2	novel	1425	4	NA	NA	0	2252	multi-exon	FALSE	canonical	3	30	junction_2	106	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTGTTTTTCTTATCT	NA	False	NA	-2	True	AGTAAA	-24	NA	42241971	42226954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr7_-_42230333_42232070_42232132_42241860
ENSMUSG00000092335.2_42229508_42241971_1	chr7	-	1124	4	FSM	ENSMUSG00000092335.2	ENSMUST00000173283.2	1425	4	0	301	0	-301	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGTCTCCGAATACACA	NA	False	NA	NA	False	NA	NA	NA	42241971	42229507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
ENSMUSG00000092335.2_42230128_42241971_1	chr7	-	504	4	FSM	ENSMUSG00000092335.2	ENSMUST00000173283.2	1425	4	0	921	0	-921	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAATGAATGTGATAAATC	NA	False	NA	5	True	NA	NA	NA	42241971	42230127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
ENSMUSG00000092335.2_42230128_42241971_2	chr7	-	377	3	NIC	ENSMUSG00000092335.2	novel	1425	4	NA	NA	0	-921	combination_of_known_splicesites	FALSE	canonical	3	30	junction_2	106	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAATGAATGTGATAAATC	NA	False	NA	5	True	NA	NA	NA	42241971	42230127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_42230333_42232070_42232132_42241860
ENSMUSG00000092341.4_5851371_5852699_1	chr19	-	876	2	NNC	ENSMUSG00000092341.4	novel	485	2	NA	NA	0	573	intron_retention	FALSE	canonical	0	0	junction_1	0	994	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGACAGGAGCGGCAGA	4062	False	NA	NA	False	NA	NA	NA	5852699	5851370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_5851408_5851860
ENSMUSG00000092349.2_34124109_34125649_1	chr17	+	820	3	NNC	ENSMUSG00000092349.2	novel	807	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	60.5	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGTGTTCTGACTTAAAT	1259	False	NA	13	True	NA	NA	NA	34124108	34125649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_34124182_34124501_34124892_34125292
ENSMUSG00000092354.8_101988021_101990357_1	chr5	+	818	2	ISM	ENSMUSG00000092354.8	ENSMUST00000174312.2	619	3	0	1841	0	-1749	5prime_fragment	FALSE	canonical	3	132	junction_1	0	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCCAGCTATCCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	101988020	101990357	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_+_101988098_101989616
ENSMUSG00000092354.8_101988021_101992198_1	chr5	+	849	3	NIC	ENSMUSG00000092354.8	novel	619	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	132	junction_1	6	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATTTCCTTTGGCTCA	NA	False	NA	15	True	ATTAAA	-25	NA	101988020	101992198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_101988098_101989616_101989940_101991749
ENSMUSG00000092354.8_101988021_101992198_2	chr5	+	789	3	NNC	ENSMUSG00000092354.8	novel	619	3	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	72	258	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATTTCCTTTGGCTCA	NA	False	NA	15	True	ATTAAA	-25	NA	101988020	101992198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_101988038_101989616_101989940_101991749
ENSMUSG00000092381.2_19450569_19483458_1	chr7	+	2695	9	Genic_Genomic	ENSMUSG00000092381.2	novel	618	2	NA	NA	1628	27802	multi-exon	FALSE	non_canonical	0	0	junction_1	0	591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCCCCGCCCCTCTTCG	NA	False	NA	NA	False	NA	NA	NA	19450568	19483458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ENSMUSG00000092381.2_19451099_19483458_1	chr7	+	2165	9	Genic_Genomic	ENSMUSG00000092381.2	novel	618	2	NA	NA	2158	27802	multi-exon	FALSE	non_canonical	0	0	junction_1	0	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCCCCGCCCCTCTTCG	NA	False	NA	NA	False	NA	NA	NA	19451098	19483458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ENSMUSG00000092386.2_72585415_72593733_1	chr6	+	4763	4	NIC	ENSMUSG00000092386.2	novel	406	2	NA	NA	-1404	560	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	475	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTGAGAGCGGCGCACGA	NA	False	NA	NA	False	NA	NA	NA	72585414	72593733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_72589094_72591054_72591139_72592506_72593433_72593659
ENSMUSG00000092386.2_72587456_72593733_1	chr6	+	2722	4	Genic_Genomic	ENSMUSG00000092386.2	novel	406	2	NA	NA	637	560	multi-exon	FALSE	non_canonical	0	0	junction_1	0	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTGAGAGCGGCGCACGA	NA	False	NA	NA	False	NA	NA	NA	72587455	72593733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_72589094_72591054_72591139_72592506_72593433_72593659
ENSMUSG00000092386.2_72588486_72593733_1	chr6	+	1692	4	Genic_Genomic	ENSMUSG00000092386.2	novel	406	2	NA	NA	1667	560	multi-exon	FALSE	non_canonical	0	0	junction_1	0	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTGAGAGCGGCGCACGA	NA	False	NA	NA	False	NA	NA	NA	72588485	72593733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_72589094_72591054_72591139_72592506_72593433_72593659
ENSMUSG00000092390.2_38306768_38323488_1	chr17	+	1710	4	NNC	ENSMUSG00000092390.2	novel	1406	3	NA	NA	-13770	201	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	1.4142135623731	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGCCTCCTCCTATATA	NA	False	NA	2	True	NA	NA	NA	38306767	38323488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_38306872_38320538_38320666_38320869_38320931_38322070
ENSMUSG00000092395.2_34820065_34822350_1	chr17	+	924	6	NIC	ENSMUSG00000092395.2	novel	366	2	NA	NA	-60	1800	intron_retention	FALSE	non_canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAGACATATATTACAT	NA	False	NA	NA	False	AATACA	-37	NA	34820064	34822350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_34820641_34820714_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
ENSMUSG00000092395.2_34820065_34822635_1	chr17	+	1209	6	NIC	ENSMUSG00000092395.2	novel	366	2	NA	NA	-60	2085	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1762	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAGAATTCAAAGGACAC	NA	False	NA	NA	False	NA	NA	NA	34820064	34822635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_34820641_34820714_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
ENSMUSG00000092395.2_34820065_34822635_2	chr17	+	1358	4	NIC	ENSMUSG00000092395.2	novel	366	2	NA	NA	-60	2085	intron_retention	FALSE	non_canonical	0	0	junction_1	0	709	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAGAATTCAAAGGACAC	NA	False	NA	NA	False	NA	NA	NA	34820064	34822635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_34820963_34821058_34821172_34821264_34821284_34822307
ENSMUSG00000092416.3_42122810_42155150_1	chr7	-	4001	6	NIC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_5	88.2813683627525	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTACTTACTGCTGTCTT	NA	False	NA	-15	True	AATAAA	-15	NA	42155150	42122809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42155033
ENSMUSG00000092416.3_42123776_42155150_1	chr7	-	3035	6	NIC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	0	-966	combination_of_known_junctions	FALSE	canonical	3	125	junction_5	88.2813683627525	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGTTA	NA	False	NA	-19	True	NA	NA	NA	42155150	42123775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42155033
ENSMUSG00000092417.4_35335176_35340974_1	chr17	+	999	7	NIC	ENSMUSG00000092417.4	novel	1518	3	NA	NA	-5255	-345	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGCGGAGGGTGGCGAAG	NA	False	NA	NA	False	NA	NA	NA	35335175	35340974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340769
ENSMUSG00000092417.4_35340458_35343791_1	chr17	+	1272	3	NIC	ENSMUSG00000092417.4	novel	676	2	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4588	False	NA	15	True	AATAAA	-15	NA	35340457	35343791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_35340527_35342028_35342636_35343195
ENSMUSG00000092482.2_124697683_124710073_1	chr6	+	2333	15	NIC	ENSMUSG00000092482.2	novel	1373	2	NA	NA	-11448	-4930	intron_retention	TRUE	non_canonical	0	0	junction_1	0	348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGGGGCAGCCAGCAGG	NA	False	NA	NA	False	NA	NA	NA	124697682	124710073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
ENSMUSG00000092490.8_8857755_8865850_1	chr7	-	2545	5	FSM	ENSMUSG00000092490.8	ENSMUST00000174729.2	825	5	-199	-1521	0	1091	multi-exon	FALSE	canonical	3	19	junction_4	6.67083203206317	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTGTCTCACTTGTTT	NA	False	NA	NA	False	NA	NA	NA	8865850	8857754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_8859771_8860940_8861028_8861801_8861928_8863073_8863113_8865573
ENSMUSG00000092558.4_47922523_47935176_1	chr17	+	1865	4	NNC	ENSMUSG00000092558.4	novel	2054	4	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	114.135397177602	827	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTTGGCCTTCTGGTCT	NA	False	NA	11	True	AATAAA	-16	NA	47922522	47935176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_47922618_47923887_47924043_47929733_47929982_47933809
ENSMUSG00000092558.4_47922523_47935176_2	chr17	+	1871	4	FSM	ENSMUSG00000092558.4	ENSMUST00000024778.3	2054	4	16	167	-10	3	multi-exon	FALSE	canonical	3	195	junction_2	32.2937902527543	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTTGGCCTTCTGGTCT	NA	False	NA	11	True	AATAAA	-16	NA	47922522	47935176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_47922618_47923887_47924043_47929733_47929988_47933809
ENSMUSG00000092564.3_34127156_34128213_1	chr17	-	901	2	FSM	ENSMUSG00000092564.3	ENSMUST00000172526.3	978	2	-61	138	-30	0	multi-exon	FALSE	canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATATTCCCTTTTACG	1193	False	NA	-5	True	AATAAA	-23	NA	34128213	34127155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34127561_34127717
ENSMUSG00000092564.3_34127156_34128213_2	chr17	-	510	2	NNC	ENSMUSG00000092564.3	novel	462	2	NA	NA	-30	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATATTCCCTTTTACG	1193	False	NA	-5	True	AATAAA	-23	NA	34128213	34127155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_34127561_34128108
ENSMUSG00000092564.3_34127156_34128291_1	chr17	-	542	2	FSM	ENSMUSG00000092564.3	ENSMUST00000174321.2	430	2	0	-112	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATATTCCCTTTTACG	1115	False	NA	-5	True	AATAAA	-23	NA	34128291	34127155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34127561_34128154
ENSMUSG00000092586.9_35284364_35289026_1	chr17	+	1016	4	NNC	ENSMUSG00000092586.9	novel	598	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	2.16024689946929	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTGTGTTTATTGTTAGA	NA	False	NA	NA	False	AATAAA	-17	NA	35284363	35289026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_35284420_35286302_35286421_35287842_35287954_35288295
ENSMUSG00000092607.10_95037031_95041250_1	chr3	-	832	7	NNC	ENSMUSG00000092607.10	novel	1054	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	139.962395743365	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGAGTCCGGTTCCTT	1310	False	NA	-24	True	AATAAA	-27	NA	95041250	95037030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_95037195_95037474_95037670_95040101_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ENSMUSG00000092607.10_95037031_95041263_1	chr3	-	806	7	NNC	ENSMUSG00000092607.10	novel	1054	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	149.532326493861	1168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGAGTCCGGTTCCTT	1297	False	NA	-24	True	AATAAA	-27	NA	95041263	95037030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_95037195_95037474_95037665_95040135_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ENSMUSG00000092607.10_95037031_95041263_2	chr3	-	722	6	NIC	ENSMUSG00000092607.10	novel	1054	7	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_2	146.199042404525	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGAGTCCGGTTCCTT	1297	False	NA	-24	True	AATAAA	-27	NA	95041263	95037030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_95037195_95037474_95037670_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ENSMUSG00000092607.10_95037031_95041322_1	chr3	-	904	7	NNC	ENSMUSG00000092607.10	novel	1054	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	139.962395743365	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGAGTCCGGTTCCTT	1238	False	NA	-24	True	AATAAA	-27	NA	95041322	95037030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_95037195_95037474_95037670_95040101_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ENSMUSG00000092607.10_95039829_95041322_1	chr3	-	818	5	ISM	ENSMUSG00000092607.10	ENSMUST00000173462.3	666	6	0	2789	0	-2225	5prime_fragment	FALSE	canonical	3	372	junction_4	25.2623732060153	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTTTCAGGTTTTTTG	1238	False	NA	NA	False	NA	NA	NA	95041322	95039828	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ENSMUSG00000092627.3_89857956_89860263_1	chr1	+	755	2	NNC	ENSMUSG00000092627.3	novel	1372	2	NA	NA	0	679	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	61	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCGACCCGATTCTTTG	NA	False	NA	14	True	GATAAA	-21	NA	89857955	89860263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_89858176_89859728
ENSMUSG00000092837.3_51044906_51045225_1	chr14	-	299	2	NNC	ENSMUSG00000071470.5	novel	444	3	NA	NA	-36	-13644	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	14505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTGATCGAGATCC	5443	False	NA	NA	False	NA	NA	NA	51045225	51044905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_51045000_51045020
ENSMUSG00000093392.2_122050377_122051087_1	chr3	+	501	2	NNC	ENSMUSG00000028124.16	novel	762	3	NA	NA	1141	467	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2548	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGCCCAAATGTCTGT	5895	False	NA	NA	False	NA	NA	NA	122050376	122051087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_122050791_122051000
ENSMUSG00000093445.8_137627440_137638764_1	chr5	+	2429	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	57	592	0	263	multi-exon	FALSE	canonical	3	234	junction_8	20.6479805391719	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTGTGCGTGTGTG	2241	False	NA	28	True	TATAAA	-16	NA	137627439	137638764	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ENSMUSG00000093483.2_83182525_83185457_1	chr11	+	314	3	NNC	ENSMUSG00000093483.2	novel	383	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.5	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTATTTGTTTGGGTAAG	5848	False	NA	9	True	ATTAAA	-18	NA	83182524	83185457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr11_+_83182626_83182827_83182924_83185340
ENSMUSG00000093516.2_35816915_35821669_1	chr17	-	1036	5	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1556	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820304_35820436_35820877_35820983_35821456
ENSMUSG00000093516.2_35816915_35821669_10	chr17	-	938	4	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	712	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820304_35820436_35821449
ENSMUSG00000093516.2_35816915_35821669_11	chr17	-	1220	4	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1802	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820304_35820453_35821184
ENSMUSG00000093516.2_35816915_35821669_12	chr17	-	1347	5	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	12002	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820304_35820436_35820892_35821037_35821184
ENSMUSG00000093516.2_35816915_35821669_13	chr17	-	1183	6	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184_35821278_35821456
ENSMUSG00000093516.2_35816915_35821669_14	chr17	-	1141	6	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	922	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820309_35820436_35820877_35821037_35821184_35821241_35821456
ENSMUSG00000093516.2_35816915_35821669_15	chr17	-	1146	6	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1600	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184_35821234_35821449
ENSMUSG00000093516.2_35816915_35821669_16	chr17	-	1352	5	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	7195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820111_35820304_35820436_35820877_35821037_35821184
ENSMUSG00000093516.2_35816915_35821669_17	chr17	-	1002	5	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1489	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820304_35820436_35820877_35820951_35821458
ENSMUSG00000093516.2_35816915_35821669_18	chr17	-	1171	6	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3752	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184_35821259_35821449
ENSMUSG00000093516.2_35816915_35821669_19	chr17	-	1352	5	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	9382	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821194
ENSMUSG00000093516.2_35816915_35821669_2	chr17	-	1175	6	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184_35821270_35821456
ENSMUSG00000093516.2_35816915_35821669_20	chr17	-	1347	5	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	15141	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820111_35820309_35820436_35820877_35821037_35821184
ENSMUSG00000093516.2_35816915_35821669_3	chr17	-	995	5	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1296	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820304_35820436_35820877_35820964_35821478
ENSMUSG00000093516.2_35816915_35821669_4	chr17	-	1151	6	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3057	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184_35821246_35821456
ENSMUSG00000093516.2_35816915_35821669_5	chr17	-	1349	5	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	7385	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820317_35820436_35820877_35821037_35821184
ENSMUSG00000093516.2_35816915_35821669_6	chr17	-	1357	5	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	26081	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820309_35820436_35820877_35821037_35821184
ENSMUSG00000093516.2_35816915_35821669_7	chr17	-	1004	5	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1515	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820304_35820436_35820877_35820951_35821456
ENSMUSG00000093516.2_35816915_35821669_8	chr17	-	1208	6	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184_35821241_35821394
ENSMUSG00000093516.2_35816915_35821669_9	chr17	-	1124	6	NNC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	863	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184_35821241_35821478
ENSMUSG00000093594.2_147878312_147894269_1	chr4	-	369	4	NNC	ENSMUSG00000093594.2	novel	2516	4	NA	NA	28	-11536	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	37.5440482041502	482	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTGTTGGTTTTTT	9499	False	NA	NA	False	NA	NA	NA	147894269	147878311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_-_147878372_147880114_147880185_147891546_147891641_147894124
ENSMUSG00000093622.2_71141659_71143181_1	chr17	+	527	2	FSM	ENSMUSG00000093622.2	ENSMUST00000175668.2	385	2	0	-142	0	142	multi-exon	FALSE	canonical	3	64	junction_1	0	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTCTATCTTTTTTTT	280	False	NA	138	True	AATACA	-14	NA	71141658	71143181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_71141798_71142793
ENSMUSG00000093674.8_128383983_128384983_1	chr10	-	497	2	NNC	ENSMUSG00000093674.8	novel	544	3	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_1	0	41405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128384983	128383982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_128384299_128384802
ENSMUSG00000093768.2_126485392_126497425_1	chr7	+	918	6	NIC	ENSMUSG00000093768.2	novel	198	2	NA	NA	-5402	1017	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	318	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTCATGGGTGGCTTG	NA	False	NA	NA	False	NA	NA	NA	126485391	126497425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126496400_126497395
ENSMUSG00000093803.6_124197647_124202493_1	chr9	+	1329	11	NNC	ENSMUSG00000093803.6	novel	422	4	NA	NA	-282	1097	at_least_one_novel_splicesite	TRUE	canonical	3	98	junction_3	32.5799017800852	123	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGTGCACAGTCAGG	NA	False	NA	20	True	AATAAA	-21	NA	124197646	124202493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ENSMUSG00000093803.6_124203004_124239779_1	chr9	+	899	2	NNC	ENSMUSG00000093803.6	novel	777	2	NA	NA	765	35020	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGGCAGGTCAGCCTAAA	NA	False	NA	NA	False	NA	NA	NA	124203003	124239779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_124203757_124239633
ENSMUSG00000093904.3_127660891_127672594_1	chr8	-	1432	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-4	3474	0	845	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	10183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTCAGTTGCTACT	NA	False	NA	-20	True	ATTAAA	-19	NA	127672594	127660890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ENSMUSG00000093904.3_127661318_127672594_1	chr8	-	1005	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-4	3901	0	418	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	9865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCTCGTTTACTTAAGA	NA	False	NA	NA	False	ATTAAA	-14	NA	127672594	127661317	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ENSMUSG00000093904.3_127661536_127672594_1	chr8	-	787	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-4	4119	0	200	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	4509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATGGATTTCCGTTTGT	NA	False	NA	NA	False	TATAAA	-19	NA	127672594	127661535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ENSMUSG00000093930.3_120151915_120168370_1	chr13	+	2123	11	FSM	ENSMUSG00000093930.3	ENSMUST00000224188.2	3464	11	-85	1426	0	-1248	multi-exon	FALSE	canonical	3	184	junction_1	180.959553491934	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTTTTTTTTTCTTTTTT	NA	False	NA	NA	False	TTTAAA	-5	NA	120151914	120168370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_120152050_120156524_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ENSMUSG00000093930.3_120152000_120169618_1	chr13	+	3286	11	FSM	ENSMUSG00000093930.3	ENSMUST00000224188.2	3464	11	0	178	0	0	multi-exon	FALSE	canonical	3	184	junction_1	180.959553491934	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTCTTTGAGTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	120151999	120169618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_120152050_120156524_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ENSMUSG00000093930.3_120152000_120169618_2	chr13	+	3385	11	NIC	ENSMUSG00000093930.3	novel	3464	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	216.614611695518	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTCTTTGAGTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	120151999	120169618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_120152050_120156425_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ENSMUSG00000093966.3_53836285_53837184_1	chr14	+	728	2	FSM	ENSMUSG00000093966.3	ENSMUST00000103655.3	411	2	0	-317	0	317	multi-exon	FALSE	canonical	1	2	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCATTTAGGTCATTTCT	NA	False	NA	NA	False	NA	NA	NA	53836284	53837184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_53836417_53836588
ENSMUSG00000094076.8_81648020_81659738_1	chr10	+	1938	5	NNC	ENSMUSG00000094076.8	novel	4725	4	NA	NA	0	544	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	20.8851023459307	450	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATACTGCCATCTATTT	4193	False	NA	NA	False	AATAAA	-20	NA	81648019	81659738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_81648118_81656960_81657088_81657287_81657349_81657885_81659477_81659677
ENSMUSG00000094132.8_17592865_17614202_1	chr14	-	2095	8	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	-5	1057	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.6961751699056	695	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTATGCTTCAGCT	NA	False	NA	NA	False	AATAAA	-17	NA	17614202	17592864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17599386_17599522_17609286_17609438_17612629_17612744_17614118
ENSMUSG00000094372.2_135661577_135673002_1	chr5	-	1874	4	NIC	ENSMUSG00000094372.2	novel	378	2	NA	NA	188	11232	intron_retention	FALSE	non_canonical	0	0	junction_1	0	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCGGCCTCGGTACTCCC	NA	False	NA	NA	False	NA	NA	NA	135673002	135661576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_135661773_135664848_135665257_135667943_135668095_135671883
ENSMUSG00000094475.8_174846530_175443705_1	chr2	+	872	4	NNC	ENSMUSG00000094475.8	novel	1497	4	NA	NA	-589241	511	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127.185778380376	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAATTTTCACTTGTTA	NA	False	NA	NA	False	NA	NA	NA	174846529	175443705	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_174846644_175435718_175435774_175442797_175442925_175443129
ENSMUSG00000094475.8_174846530_175444233_1	chr2	+	1400	4	NNC	ENSMUSG00000094475.8	novel	1497	4	NA	NA	-589241	1039	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127.185778380376	846	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGATTGCTCTGTTCAA	NA	False	NA	NA	False	NA	NA	NA	174846529	175444233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_174846644_175435718_175435774_175442797_175442925_175443129
ENSMUSG00000094487.2_54600279_54624872_1	chr3	-	1920	21	NNC	ENSMUSG00000094487.2	novel	648	2	NA	NA	-3098	20318	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCTGCTGTAACGCCCA	9755	False	NA	NA	False	NA	NA	NA	54624872	54600278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759
ENSMUSG00000094497.2_43228316_43228933_1	chr1	+	591	2	Genic_Genomic	ENSMUSG00000094497.2	novel	483	1	NA	NA	0	135	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20587	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAGGCAGATGTGTTA	NA	False	NA	NA	False	AATAAA	-35	NA	43228315	43228933	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_43228465_43228491
ENSMUSG00000094786.2_177156544_177199955_1	chr2	+	1200	4	Fusion	ENSMUSG00000094786.2_ENSMUSG00000078866.11	novel	794	4	NA	NA	18	-707	multi-exon	FALSE	canonical	3	142	junction_1	48.0578355271599	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTGAGTTCGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	177156543	177199955	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_+_177156642_177193535_177193591_177198701_177198829_177199035
ENSMUSG00000094786.2_177156544_177200358_2	chr2	+	453	5	Fusion	ENSMUSG00000094786.2_ENSMUSG00000078866.11	novel	794	4	NA	NA	18	-304	multi-exon	FALSE	canonical	3	142	junction_1	41.6833300013327	605	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	17	True	NA	NA	NA	177156543	177200358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_+_177156642_177193535_177193591_177198701_177198829_177199035_177199097_177200246
ENSMUSG00000094786.2_177190008_177199243_2	chr2	+	493	4	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	0	-1419	combination_of_known_junctions	FALSE	canonical	3	153	junction_2	39.4208066888541	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGATATGTAATTATTG	NA	False	NA	NA	False	NA	NA	NA	177190007	177199243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035
ENSMUSG00000094786.2_177190008_177199623_1	chr2	+	873	4	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	0	-1039	combination_of_known_junctions	FALSE	canonical	3	153	junction_2	39.4208066888541	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTATTCTTCTTTTGAT	NA	False	NA	NA	False	NA	NA	NA	177190007	177199623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035
ENSMUSG00000094786.2_177190008_177199623_2	chr2	+	818	3	ISM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	-100	1641	0	-1039	5prime_fragment	FALSE	canonical	3	122	junction_1	63.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTATTCTTCTTTTGAT	NA	False	NA	NA	False	NA	NA	NA	177190007	177199623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_177190111_177198701_177198829_177199035
ENSMUSG00000094786.2_177190008_177200041_1	chr2	+	1291	4	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	0	-621	combination_of_known_junctions	FALSE	canonical	3	153	junction_2	39.4208066888541	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTTCCCATTTCATGT	NA	False	NA	NA	False	NA	NA	NA	177190007	177200041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035
ENSMUSG00000094786.2_177190008_177200041_2	chr2	+	1236	3	ISM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	-100	1223	0	-621	5prime_fragment	FALSE	canonical	3	122	junction_1	63.5	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTTCCCATTTCATGT	NA	False	NA	NA	False	NA	NA	NA	177190007	177200041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_177190111_177198701_177198829_177199035
ENSMUSG00000094786.2_177190008_177200358_1	chr2	+	560	6	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	0	-304	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	82.9216497665115	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	17	True	NA	NA	NA	177190007	177200358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246
ENSMUSG00000094786.2_177190008_177200358_2	chr2	+	403	4	FSM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	-100	906	0	-304	multi-exon	FALSE	canonical	3	122	junction_1	52.0405824546788	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	17	True	NA	NA	NA	177190007	177200358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246
ENSMUSG00000095180.11_36891636_36897311_1	chrX	+	1009	6	NNC	ENSMUSG00000095180.11	novel	893	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	1592.14803331851	13916	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTGATTCGAGTAATAT	8505	False	NA	20	True	ATTAAA	-17	NA	36891635	36897311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_36891820_36892583_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
ENSMUSG00000095180.11_36891636_36897311_2	chrX	+	888	6	NNC	ENSMUSG00000095180.11	novel	893	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1550.62782123887	14093	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTGATTCGAGTAATAT	8505	False	NA	20	True	ATTAAA	-17	NA	36891635	36897311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_36891707_36892583_36892653_36893274_36893357_36893532_36893883_36894500_36894547_36897041
ENSMUSG00000095199.9_176031650_176221326_1	chr2	+	573	3	NNC	ENSMUSG00000095199.9	novel	461	4	NA	NA	-181143	-324	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	11.5	556	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTAATTATTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	176031649	176221326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_176031884_176220781_176220909_176221114
ENSMUSG00000095199.9_176031703_176412412_1	chr2	+	481	4	Fusion	ENSMUSG00000078878.10_ENSMUSG00000095199.9	novel	461	4	NA	NA	-181090	416	multi-exon	FALSE	canonical	3	6	junction_3	17.1723291631883	325	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	176031702	176412412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr2_+_176031884_176220781_176220909_176221114_176221176_176412300
ENSMUSG00000095304.10_25888828_25902911_1	chr14	-	410	4	NNC	ENSMUSG00000095304.10	novel	536	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	82.174610839764	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCTAGCCATGACCTCT	NA	False	NA	-14	True	AATAAA	-18	NA	25902911	25888827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_25888951_25889319_25889444_25891184_25891280_25902843
ENSMUSG00000095315.3_150153351_150170958_2	chr2	+	4185	4	FSM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	0	-2026	0	2026	multi-exon	FALSE	canonical	3	122	junction_3	5.43650214343336	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGGAGGTGTCCTGTGGT	NA	False	NA	7	True	NA	NA	NA	150153350	150170958	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_150153479_150165621_150165749_150165947_150166009_150167089
ENSMUSG00000095362.8_177475263_177482116_1	chr2	-	1056	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	13	-759	-5	759	multi-exon	FALSE	canonical	3	312	junction_1	213.5	2504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTGCATTTGTTCA	NA	False	NA	-5	True	NA	NA	NA	177482116	177475262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_177476105_177476312_177476440_177482029
ENSMUSG00000095362.8_177475530_177482116_1	chr2	-	789	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	13	-492	-5	492	multi-exon	FALSE	canonical	3	312	junction_1	213.5	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAATTTTCACTTGTTA	NA	False	NA	-12	True	NA	NA	NA	177482116	177475529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_177476105_177476312_177476440_177482029
ENSMUSG00000095362.8_177475893_177482116_1	chr2	-	426	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	13	-129	-5	129	multi-exon	FALSE	canonical	3	312	junction_1	213.5	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGAAATTATTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	177482116	177475892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_177476105_177476312_177476440_177482029
ENSMUSG00000095403.9_21090243_21123101_1	chr8	+	1343	4	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17370	314	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	55.8350745997134	949	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCATTCAAAGTTAGGGC	5842	False	NA	NA	False	AATAAA	-15	NA	21090242	21123101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_21090445_21107448_21107822_21112754_21113050_21122628
ENSMUSG00000095403.9_21090327_21122607_1	chr8	+	1294	6	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17286	-180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	216.584948692193	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	5926	False	NA	NA	False	AATAAA	-14	NA	21090326	21122607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_21090445_21107448_21107822_21112754_21113054_21116684_21116805_21118696_21118865_21122391
ENSMUSG00000095432.10_67687357_67701257_1	chr13	-	4004	4	FSM	ENSMUSG00000095432.10	ENSMUST00000181892.9	5293	4	692	597	0	-597	multi-exon	FALSE	canonical	3	55	junction_1	6.68331255192114	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAGTCATGGCATTTA	NA	False	NA	0	True	NA	NA	NA	67701257	67687356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67691030_67693442_67693539_67694743_67694871_67701149
ENSMUSG00000095432.10_67689214_67701257_1	chr13	-	2147	4	FSM	ENSMUSG00000095432.10	ENSMUST00000181892.9	5293	4	692	2454	0	-2454	multi-exon	FALSE	canonical	3	55	junction_1	6.68331255192114	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTCGAAACACCAGAGAT	NA	False	NA	NA	False	NA	NA	NA	67701257	67689213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67691030_67693442_67693539_67694743_67694871_67701149
ENSMUSG00000095432.10_67692220_67701257_1	chr13	-	1554	3	FSM	ENSMUSG00000095432.10	ENSMUST00000053289.11	700	3	0	-854	0	854	multi-exon	FALSE	canonical	3	60	junction_2	5.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTATGTCTGCATTCTT	NA	False	NA	NA	False	ATTAAA	-20	NA	67701257	67692219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67693539_67694743_67694871_67701149
ENSMUSG00000095595.3_55171254_55185800_1	chr12	+	833	5	FSM	ENSMUSG00000095595.3	ENSMUST00000177768.3	3922	5	0	3089	0	-3089	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCCAATCAGGAGCTTT	NA	False	NA	NA	False	TATAAA	-16	NA	55171253	55185800	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902_55184001_55185560
ENSMUSG00000095595.3_55171254_55186379_1	chr12	+	1412	5	FSM	ENSMUSG00000095595.3	ENSMUST00000177768.3	3922	5	0	2510	0	-2510	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGATTTCCTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	55171253	55186379	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902_55184001_55185560
ENSMUSG00000095597.3_151692501_151693151_1	chrX	-	586	2	Genic_Genomic	ENSMUSG00000095597.3	novel	651	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	1	11	junction_1	0	2583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	151693151	151692500	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chrX_-_151692761_151692825
ENSMUSG00000095648.8_175885147_176024502_1	chr2	-	1284	4	NNC	ENSMUSG00000095648.8	novel	195	3	NA	NA	-132884	946	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	65.335033991471	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTCCCATTTCATATA	NA	False	NA	NA	False	NA	NA	NA	176024502	175885146	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_175886158_175886363_175886491_175891615_175891671_176024411
ENSMUSG00000095648.8_175885582_176024502_1	chr2	-	849	4	NNC	ENSMUSG00000095648.8	novel	195	3	NA	NA	-132884	511	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	65.335033991471	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAATTTTCACTTGTTA	NA	False	NA	NA	False	NA	NA	NA	176024502	175885581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_175886158_175886363_175886491_175891615_175891671_176024411
ENSMUSG00000095677.3_6916337_6923240_1	chr17	-	705	5	NNC	ENSMUSG00000095677.3	novel	771	5	NA	NA	-23	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	3388.49327688576	10823	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6923240	6916336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_6916737_6917085_6917164_6917501_6917619_6920709_6920752_6923172
ENSMUSG00000095687.3_8347426_8366620_1	chr17	-	966	9	FSM	ENSMUSG00000095687.3	ENSMUST00000097420.7	1793	9	309	518	-3	-518	multi-exon	FALSE	canonical	0	0	junction_6	240.913852600883	755	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGGCTTTTTCTTGT	NA	False	NA	-4	True	AAAAAG	-11	NA	8366620	8347425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
ENSMUSG00000095909.3_66261294_66269165_1	chr13	+	408	4	FSM	ENSMUSG00000095909.3	ENSMUST00000238623.2	1525	4	0	1117	0	-1117	multi-exon	FALSE	canonical	3	113	junction_1	62.9620697104393	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTCCTCTCACAGTTG	NA	False	NA	NA	False	NA	NA	NA	66261293	66269165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026
ENSMUSG00000095909.3_66261294_66270901_1	chr13	+	2059	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	0	251	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	91.7234293951115	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACCTCATGAACATAAT	NA	False	NA	NA	False	NA	NA	NA	66261293	66270901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269602_66269686
ENSMUSG00000095909.3_66261294_66271632_2	chr13	+	2875	4	FSM	ENSMUSG00000095909.3	ENSMUST00000238623.2	1525	4	0	-1350	0	982	multi-exon	FALSE	canonical	3	113	junction_1	62.9620697104393	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAAAAGAACACATAATG	NA	False	NA	NA	False	NA	NA	NA	66261293	66271632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026
ENSMUSG00000095909.3_66261294_66271632_4	chr13	+	2790	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	0	982	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	91.7234293951115	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAAAAGAACACATAATG	NA	False	NA	NA	False	NA	NA	NA	66261293	66271632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269602_66269686
ENSMUSG00000095909.3_66261294_66271971_1	chr13	+	3214	4	FSM	ENSMUSG00000095909.3	ENSMUST00000238623.2	1525	4	0	-1689	0	1321	multi-exon	FALSE	canonical	3	113	junction_1	62.9620697104393	1575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261293	66271971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026
ENSMUSG00000095909.3_66261294_66271971_3	chr13	+	3129	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	0	1321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	91.7234293951115	1568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261293	66271971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269602_66269686
ENSMUSG00000095909.3_66261294_66328219_1	chr13	+	1603	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	0	2305	multi-exon	FALSE	canonical	3	19	junction_4	47.642837866777	1852	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATAAAGTTTCTTC	NA	False	NA	6	True	AATAAA	-24	NA	66261293	66328219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325840_66326525_66327712
ENSMUSG00000095930.2_120173460_120217489_1	chr13	-	2344	4	FSM	ENSMUSG00000095930.2	ENSMUST00000178142.2	4103	4	-71	1830	-71	-1830	multi-exon	FALSE	canonical	3	6	junction_2	3.55902608401044	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAAAGTCTCTTAGCCTA	NA	False	NA	NA	False	AATAAA	-23	NA	120217489	120173459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_120174332_120175643_120175913_120189115_120190060_120217230
ENSMUSG00000095941.4_110828073_110838646_1	chr8	+	1473	9	NNC	ENSMUSG00000095941.4	novel	1649	10	NA	NA	234	53	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	7.68114574786861	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGATTGTGTGTTTCAG	NA	False	NA	11	True	AATAAA	-18	NA	110828072	110838646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_110828167_110835615_110835754_110836017_110836077_110836409_110836623_110836712_110836955_110837152_110837295_110837438_110837593_110837930_110838005_110838289
ENSMUSG00000095990.2_17284340_17367100_1	chr17	+	2697	4	Fusion	ENSMUSG00000095990.2_ENSMUSG00000096696.2	novel	2667	4	NA	NA	-35	7	multi-exon	FALSE	canonical	3	169	junction_3	41.6973220562984	1839	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTAAGGGATGCAACAT	NA	False	NA	NA	False	NA	NA	NA	17284339	17367100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_+_17284469_17362997_17363125_17363366_17363428_17364720
ENSMUSG00000095990.2_17284340_17367100_2	chr17	+	2277	6	Fusion	ENSMUSG00000095990.2_ENSMUSG00000096696.2	novel	2667	4	NA	NA	-35	7	multi-exon	TRUE	non_canonical	0	0	junction_4	109.232595867717	2296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTAAGGGATGCAACAT	NA	False	NA	NA	False	NA	NA	NA	17284339	17367100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr17_+_17284469_17362997_17363125_17363366_17363428_17364720_17366130_17366465_17366734_17366817
ENSMUSG00000095990.2_17341677_17367100_1	chr17	+	2270	6	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	0	7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	117.263122933001	2252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTAAGGGATGCAACAT	NA	False	NA	NA	False	NA	NA	NA	17341676	17367100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_17341800_17362997_17363125_17363366_17363428_17364720_17366130_17366465_17366767_17366851
ENSMUSG00000095990.2_17341677_17367100_2	chr17	+	2271	6	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	117.263122933001	2294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTAAGGGATGCAACAT	NA	False	NA	NA	False	NA	NA	NA	17341676	17367100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_17341800_17362997_17363125_17363366_17363428_17364720_17366130_17366465_17366734_17366817
ENSMUSG00000096145.3_127492235_127494626_1	chr7	-	585	3	FSM	ENSMUSG00000096145.3	ENSMUST00000033074.8	748	3	163	0	-145	0	multi-exon	FALSE	canonical	3	262	junction_2	18.5	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTAGCATATGTCTGCC	NA	False	NA	-11	True	AATAAA	-19	NA	127494626	127492234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127492664_127493676_127493787_127494580
ENSMUSG00000096145.3_127492235_127494789_1	chr7	-	743	3	NNC	ENSMUSG00000096145.3	novel	748	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	131	1974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTAGCATATGTCTGCC	NA	False	NA	-11	True	AATAAA	-19	NA	127494789	127492234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_127492664_127493681_127493787_127494580
ENSMUSG00000096175.4_120373631_120375032_1	chr13	-	853	2	NNC	ENSMUSG00000096175.4	novel	1374	3	NA	NA	-744	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	114	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTGTTTATTTGTT	NA	False	NA	-63	True	NA	NA	NA	120375032	120373630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_120374317_120374865
ENSMUSG00000096199.3_4263482_4284294_1	chr12	+	2503	7	Fusion	ENSMUSG00000020654.16_ENSMUSG00000096199.3	novel	3840	2	NA	NA	10214	-5656	multi-exon	FALSE	non_canonical	0	0	junction_1	0	324	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCGGAGGGACCCTAAACG	NA	False	NA	NA	False	NA	NA	NA	4263481	4284294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr12_+_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283781
ENSMUSG00000096199.3_4284027_4286698_1	chr12	+	588	2	FSM	ENSMUSG00000096199.3	ENSMUST00000179139.3	3840	2	0	3252	0	-3252	multi-exon	FALSE	canonical	3	212	junction_1	0	926	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTACTATCATCATTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	4284026	4286698	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_4284279_4286362
ENSMUSG00000096221.4_155789592_155818336_1	chr4	-	1137	5	Genic_Genomic	ENSMUSG00000096221.4	novel	2183	1	NA	NA	748	27410	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCGCGTGACGTCACAGGA	NA	False	NA	NA	False	NA	NA	NA	155818336	155789591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_-_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
ENSMUSG00000096221.4_155789786_155818336_1	chr4	-	943	5	Genic_Genomic	ENSMUSG00000096221.4	novel	2183	1	NA	NA	748	27216	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1674	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTCCGCGCGAGGAAGAT	NA	False	NA	NA	False	NA	NA	NA	155818336	155789785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_-_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
ENSMUSG00000096299.4_149467588_149484039_1	chr6	+	444	3	FSM	ENSMUSG00000096299.4	ENSMUST00000203729.3	1352	3	-42	950	0	-950	multi-exon	FALSE	canonical	3	8	junction_1	5.5	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGGTGTCTGATTTGTG	NA	False	NA	NA	False	NA	NA	NA	149467587	149484039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_149467693_149483509_149483637_149483827
ENSMUSG00000096316.8_99110990_99119292_1	chr9	-	1224	5	FSM	ENSMUSG00000096316.8	ENSMUST00000178051.8	785	5	0	-439	0	439	multi-exon	FALSE	canonical	3	6	junction_3	2.6809513236909	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTCTTCGTACTTTTTT	NA	False	NA	NA	False	AATAAA	-34	NA	99119292	99110989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_99111671_99114500_99114551_99116351_99116581_99118292_99118411_99119146
ENSMUSG00000096370.9_4835180_4843911_1	chr19	-	907	3	FSM	ENSMUSG00000094936.9	ENSMUST00000164209.9	801	3	17	-123	0	1	multi-exon	FALSE	canonical	3	15	junction_1	27.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTGTGCTTTGAGAAA	NA	False	NA	-3	True	AATAAA	-17	NA	4843911	4835179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4835596_4842425_4842849_4843843
ENSMUSG00000096370.9_4835180_4843911_2	chr19	-	1589	4	FSM	ENSMUSG00000094936.9	ENSMUST00000179189.9	1411	4	-23	-155	0	1	multi-exon	FALSE	canonical	3	70	junction_3	11.4406682011537	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTGTGCTTTGAGAAA	NA	False	NA	-3	True	AATAAA	-17	NA	4843911	4835179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843843
ENSMUSG00000096370.9_4835180_4843911_3	chr19	-	1733	4	FSM	ENSMUSG00000094936.9	ENSMUST00000180248.8	2610	4	18	859	0	1	multi-exon	FALSE	canonical	3	26	junction_3	29.8923996285938	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTGTGCTTTGAGAAA	NA	False	NA	-3	True	AATAAA	-17	NA	4843911	4835179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843699
ENSMUSG00000096370.9_4842113_4861631_1	chr19	-	1362	3	NIC	ENSMUSG00000096370.9	novel	2432	3	NA	NA	0	550	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	17.5	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAATGATGGTCTAGAGG	7796	False	NA	NA	False	AATAAA	-12	NA	4861631	4842112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_4842849_4843843_4844038_4861199
ENSMUSG00000096401.3_20697888_20725126_1	chr8	+	2971	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-97	-2140	multi-exon	FALSE	canonical	3	200	junction_2	399.990234255788	1658	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTAAGTATACCAATTAAG	NA	False	NA	NA	False	NA	NA	NA	20697887	20725126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr8_+_20698090_20711891_20712265_20717197_20717497_20721120_20721241_20723149
ENSMUSG00000096401.3_20697888_20726473_1	chr8	+	4318	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-97	-793	multi-exon	FALSE	canonical	3	200	junction_2	399.990234255788	3274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20697887	20726473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr8_+_20698090_20711891_20712265_20717197_20717497_20721120_20721241_20723149
ENSMUSG00000096401.3_20717387_20725126_1	chr8	+	2203	3	ISM	ENSMUSG00000096401.3	ENSMUST00000096485.6	930	5	5284	2140	5284	-2140	internal_fragment	FALSE	canonical	3	42	junction_1	579.5	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTAAGTATACCAATTAAG	NA	False	NA	NA	False	NA	NA	NA	20717386	20725126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_20717493_20721120_20721241_20723149
ENSMUSG00000096401.3_20717387_20726473_1	chr8	+	3550	3	ISM	ENSMUSG00000096401.3	ENSMUST00000096485.6	930	5	5284	793	5284	-793	internal_fragment	FALSE	canonical	3	42	junction_1	579.5	1403	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20717386	20726473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_20717493_20721120_20721241_20723149
ENSMUSG00000096472.3_21199762_21202298_1	chr9	-	1061	2	FSM	ENSMUSG00000096472.3	ENSMUST00000215619.2	1423	2	306	56	151	0	multi-exon	FALSE	canonical	3	236	junction_1	0	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGTTTTGTGTGA	NA	False	NA	NA	False	TATAAA	-18	NA	21202298	21199761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21200629_21202104
ENSMUSG00000096472.3_21199762_21202449_1	chr9	-	1212	2	FSM	ENSMUSG00000096472.3	ENSMUST00000215619.2	1423	2	155	56	0	0	multi-exon	FALSE	canonical	3	236	junction_1	0	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGTTTTGTGTGA	NA	False	NA	NA	False	TATAAA	-18	NA	21202449	21199761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21200629_21202104
ENSMUSG00000096472.3_21199762_21202604_1	chr9	-	1111	3	FSM	ENSMUSG00000096472.3	ENSMUST00000213407.2	691	3	99	-519	0	0	multi-exon	FALSE	canonical	3	31	junction_2	102.5	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGTTTTGTGTGA	NA	False	NA	NA	False	TATAAA	-18	NA	21202604	21199761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21200629_21202104_21202262_21202517
ENSMUSG00000096574.8_19114974_19137146_1	chr14	-	1971	7	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.46249406456535	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	AATAAA	-17	NA	19137146	19114973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19132241_19132393_19135569_19135684_19137061
ENSMUSG00000096574.8_19114974_19137146_2	chr14	-	2106	8	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.38505138783324	709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	AATAAA	-17	NA	19137146	19114973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19122451_19122587_19132241_19132393_19135569_19135684_19137061
ENSMUSG00000096655.3_95739722_95756454_1	chr9	-	2639	12	NIC	ENSMUSG00000096655.3	novel	506	2	NA	NA	-16079	-2117	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTCCGGTGGAGAGGGCG	NA	False	NA	NA	False	AAAACA	-31	NA	95756454	95739721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403
ENSMUSG00000096696.2_17284375_17309890_1	chr17	+	2246	6	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	105.978110947497	1761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGATGCAACATAGTTT	NA	False	NA	NA	False	NA	NA	NA	17284374	17309890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505_17308915_17309250_17309552_17309636
ENSMUSG00000096727.4_34401004_34406313_1	chr17	-	884	6	FSM	ENSMUSG00000096727.4	ENSMUST00000174576.4	1352	6	425	43	-1	0	multi-exon	FALSE	canonical	2	4	junction_1	3.70944739819828	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGTTGCAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	34406313	34401003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34401326_34402062_34402205_34402588_34402719_34403255_34403388_34404703_34404772_34406223
ENSMUSG00000096740.9_8866263_8869991_1	chr19	+	2307	5	NNC	ENSMUSG00000071653.10	novel	500	5	NA	NA	0	1746	at_least_one_novel_splicesite	FALSE	non_canonical	3	20	junction_4	1387.41215938163	11115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTTTTGTTTTTTTT	NA	False	NA	15	True	NA	NA	NA	8866262	8869991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774_8868258_8868456
ENSMUSG00000096740.9_8866263_8869991_2	chr19	+	2506	4	FSM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	46	-1746	0	1746	multi-exon	FALSE	canonical	3	2965	junction_2	196.086715511276	11135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTTTTGTTTTTTTT	NA	False	NA	15	True	NA	NA	NA	8866262	8869991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774
ENSMUSG00000096768.9_90796321_90833671_1	chrY	+	907	3	NNC	ENSMUSG00000096768.9	novel	774	4	NA	NA	141	5937	intron_retention	FALSE	canonical	3	68	junction_1	974.5	418	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	4266	False	NA	NA	False	AATAAA	-18	NA	90796320	90833671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrY_+_90796989_90804564_90804687_90833554
ENSMUSG00000096768.9_90796855_90833671_1	chrY	+	373	3	NNC	ENSMUSG00000096768.9	novel	774	4	NA	NA	0	5937	intron_retention	FALSE	canonical	3	68	junction_1	974.5	285	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	4800	False	NA	NA	False	AATAAA	-18	NA	90796854	90833671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrY_+_90796989_90804564_90804687_90833554
ENSMUSG00000096768.9_90797217_90833671_1	chrY	+	271	3	NNC	ENSMUSG00000096768.9	novel	696	4	NA	NA	100	5937	intron_retention	FALSE	canonical	3	607	junction_1	705	311	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	5162	False	NA	NA	False	AATAAA	-18	NA	90797216	90833671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrY_+_90797249_90804564_90804687_90833554
ENSMUSG00000096768.9_90797217_90833671_2	chrY	+	289	3	NNC	ENSMUSG00000096768.9	novel	774	4	NA	NA	100	5937	intron_retention	FALSE	non_canonical	0	0	junction_1	1008.5	328	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	5162	False	NA	NA	False	AATAAA	-18	NA	90797216	90833671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrY_+_90797249_90804546_90804687_90833554
ENSMUSG00000096768.9_90803343_90833671_1	chrY	+	939	3	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	1623	5937	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1008.5	474	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	90803342	90833671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrY_+_90803749_90804270_90804687_90833554
ENSMUSG00000096768.9_90803725_90833671_1	chrY	+	1002	3	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	2005	5937	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1008.5	802	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	90803724	90833671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrY_+_90804081_90804157_90804687_90833554
ENSMUSG00000096780.8_6723808_6744541_1	chr17	-	1071	6	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10120	-15007	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	282.126638231841	6290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGTGTTTCTTTTCCCC	2348	False	NA	NA	False	AATAAA	-15	NA	6744541	6723807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_6723893_6723915_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ENSMUSG00000096780.8_6723808_6744541_2	chr17	-	1094	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10120	-15007	at_least_one_novel_splicesite	FALSE	canonical	3	324	junction_3	195.078670028273	6453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGTGTTTCTTTTCCCC	2348	False	NA	NA	False	AATAAA	-15	NA	6744541	6723807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ENSMUSG00000096780.8_6723929_6744541_2	chr17	-	973	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10120	-15128	at_least_one_novel_splicesite	FALSE	canonical	3	324	junction_3	195.078670028273	5885	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTTTATCGTTTGTA	2348	False	NA	NA	False	NA	NA	NA	6744541	6723928	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ENSMUSG00000096788.9_36712105_36723468_1	chrX	+	767	5	NNC	ENSMUSG00000096788.9	novel	735	5	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	31.4523449046331	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTTGTGCTTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	36712104	36723468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_36712216_36712377_36712790_36720942_36720989_36721255_36721305_36723319
ENSMUSG00000096788.9_36712105_36723468_2	chrX	+	718	4	NNC	ENSMUSG00000096788.9	novel	799	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_3	23.6690139681023	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTTGTGCTTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	36712104	36723468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_36712216_36712377_36712790_36720942_36720989_36723319
ENSMUSG00000096834.8_147446594_147486845_1	chrX	+	1978	8	NNC	ENSMUSG00000096834.8	novel	2026	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	5.31843156256751	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	147446593	147486845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_+_147446686_147463739_147463866_147464585_147464666_147468313_147468969_147469016_147469273_147478430_147478513_147479317_147479368_147486208
ENSMUSG00000096904.8_16042668_16063946_1	chr14	+	1697	5	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14623	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.6624340560681	250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTATGCTTCAGCT	NA	False	NA	NA	False	AATAAA	-17	NA	16042667	16063946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_16042755_16058159_16058323_16059272_16059405_16060080_16060263_16062813
ENSMUSG00000096916.8_27686493_27713581_1	chr7	-	3985	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-41	1644	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	28.6454184818445	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713581	27686492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713445
ENSMUSG00000096916.8_27686493_27713581_2	chr7	-	3990	6	FSM	ENSMUSG00000096916.8	ENSMUST00000180502.8	6163	6	-41	2214	-41	1644	multi-exon	FALSE	canonical	3	64	junction_5	35.6482818660311	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713581	27686492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713440
ENSMUSG00000096916.8_27689844_27713581_1	chr7	-	639	6	FSM	ENSMUSG00000096916.8	ENSMUST00000180502.8	6163	6	-41	5565	-41	-1707	multi-exon	FALSE	canonical	3	64	junction_5	35.6482818660311	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGGGCTCCAGTTTTAG	NA	False	NA	NA	False	TATAAA	-44	NA	27713581	27689843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713440
ENSMUSG00000096917.3_57941088_57963296_1	chr8	+	809	4	NNC	ENSMUSG00000096917.3	novel	2618	3	NA	NA	0	1385	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	55.8629274802768	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGTCTATTGGTTTTG	NA	False	NA	14	True	NA	NA	NA	57941087	57963296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_57941228_57943373_57943502_57959561_57959836_57963029
ENSMUSG00000096917.3_57941088_57963296_2	chr8	+	717	4	NNC	ENSMUSG00000096917.3	novel	2618	3	NA	NA	0	1385	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	50.4799189997589	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGTCTATTGGTTTTG	NA	False	NA	14	True	NA	NA	NA	57941087	57963296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_57941228_57943373_57943502_57959561_57959836_57963121
ENSMUSG00000096917.3_57942657_57963296_1	chr8	+	737	4	NNC	ENSMUSG00000096917.3	novel	2618	3	NA	NA	1569	1385	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	57.092517509351	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGTCTATTGGTTTTG	NA	False	NA	14	True	NA	NA	NA	57942656	57963296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_57942817_57943373_57943502_57959561_57959836_57963121
ENSMUSG00000096917.3_57958849_57959765_1	chr8	+	322	2	NNC	ENSMUSG00000096917.3	novel	298	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTCCTGCTTCTTTCAA	NA	False	NA	9	True	NA	NA	NA	57958848	57959765	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_57958967_57959561
ENSMUSG00000096917.3_57958849_57963296_1	chr8	+	567	3	NNC	ENSMUSG00000096917.3	novel	298	2	NA	NA	0	1385	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	13	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGTCTATTGGTTTTG	NA	False	NA	14	True	NA	NA	NA	57958848	57963296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_57958967_57959561_57959836_57963121
ENSMUSG00000096917.3_57958849_57963296_2	chr8	+	543	3	NNC	ENSMUSG00000096917.3	novel	298	2	NA	NA	0	1385	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	11	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGTCTATTGGTTTTG	NA	False	NA	14	True	NA	NA	NA	57958848	57963296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_57958943_57959561_57959836_57963121
ENSMUSG00000096935.6_88079316_88085330_1	chr3	-	580	3	NNC	ENSMUSG00000096935.6	novel	987	3	NA	NA	-238	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0.5	42	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCGTAAGAATCTCGAG	NA	False	NA	NA	False	AGTAAA	-39	NA	88085330	88079315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_88079566_88083157_88083243_88085085
ENSMUSG00000096968.2_170701757_170712993_1	chr1	+	1250	6	Genic_Genomic	ENSMUSG00000096968.2_ENSMUSG00000053925.5	novel	1671	2	NA	NA	5543	-457	multi-exon	FALSE	non_canonical	0	0	junction_1	0	672	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGCCGCTGCCCGCCAC	NA	False	NA	NA	False	NA	NA	NA	170701756	170712993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708590_170712635
ENSMUSG00000096981.3_21983542_21996723_1	chr9	+	1555	8	Genic_Genomic	ENSMUSG00000096981.3	novel	567	4	NA	NA	1214	247	multi-exon	FALSE	non_canonical	0	0	junction_1	0	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTACGAGTCGAAGGTGAC	NA	False	NA	NA	False	NA	NA	NA	21983541	21996723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21995318_21995505_21996644
ENSMUSG00000096981.3_21983542_21996723_2	chr9	+	1479	8	Genic_Genomic	ENSMUSG00000096981.3	novel	567	4	NA	NA	1214	247	multi-exon	FALSE	non_canonical	0	0	junction_1	0	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTACGAGTCGAAGGTGAC	NA	False	NA	NA	False	NA	NA	NA	21983541	21996723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21996652
ENSMUSG00000097000.3_73246788_73258444_1	chr8	+	2085	2	FSM	ENSMUSG00000097000.3	ENSMUST00000181452.2	2994	2	10	899	0	-899	multi-exon	FALSE	canonical	3	10	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCATCCTGCTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	73246787	73258444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_73246895_73256466
ENSMUSG00000097032.3_135144077_135171821_2	chr3	-	1642	8	NIC	ENSMUSG00000097032.3	novel	511	3	NA	NA	-27395	-2090	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	915	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCTCGCAGCAGCTCCG	NA	False	NA	NA	False	NA	NA	NA	135171821	135144076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_135144324_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000097032.3_135144294_135171060_1	chr3	-	664	8	NIC	ENSMUSG00000097032.3	novel	511	3	NA	NA	-26634	-2307	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGGCGGGGGACGGAGG	NA	False	NA	NA	False	NA	NA	NA	135171060	135144293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_135144324_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000097032.3_135144294_135171821_1	chr3	-	1425	8	NIC	ENSMUSG00000097032.3	novel	511	3	NA	NA	-27395	-2307	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGGCGGGGGACGGAGG	NA	False	NA	NA	False	NA	NA	NA	135171821	135144293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_135144324_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000097039.9_61909878_62121376_1	chr15	+	1338	7	NIC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	7.7817450199525	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGAAGTCATGATTGTC	NA	False	NA	26	True	AATAAA	-34	NA	61909877	62121376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_61910051_61978996_61979315_62047315_62047398_62114022_62114151_62114282_62114411_62116567_62116707_62121006
ENSMUSG00000097048.8_86503229_86541431_1	chr6	+	594	5	NNC	ENSMUSG00000097048.8	novel	713	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	46.0129057982649	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTATTTTTAAATTTA	NA	False	NA	9	True	NA	NA	NA	86503228	86541431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_86503344_86504872_86504957_86509174_86509290_86540413_86540520_86541257
ENSMUSG00000097048.8_86503792_86541431_1	chr6	+	491	5	NNC	ENSMUSG00000097048.8	novel	2099	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.2493386197098	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTATTTTTAAATTTA	NA	False	NA	9	True	NA	NA	NA	86503791	86541431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_86503804_86504872_86504957_86509174_86509290_86540413_86540520_86541257
ENSMUSG00000097048.8_86504301_86541431_1	chr6	+	632	5	NNC	ENSMUSG00000097048.8	novel	594	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	37.6231311828242	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTATTTTTAAATTTA	NA	False	NA	9	True	NA	NA	NA	86504300	86541431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_86504416_86504872_86504957_86509136_86509290_86540413_86540520_86541257
ENSMUSG00000097055.3_21440677_21467589_2	chr12	+	1592	6	NNC	ENSMUSG00000097055.3	novel	1431	4	NA	NA	-26647	-1432	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5035	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGAGCCGACGAGCTCGC	NA	False	NA	NA	False	NA	NA	NA	21440676	21467589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467455
ENSMUSG00000097057.2_77843198_77854722_1	chr15	+	1832	15	NIC	ENSMUSG00000097057.2	novel	4343	2	NA	NA	-2676	3396	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCGTGCCTGGGACCACC	2924	False	NA	NA	False	NA	NA	NA	77843197	77854722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854658
ENSMUSG00000097057.2_77843198_77855013_1	chr15	+	1892	15	NNC	ENSMUSG00000097057.2	novel	4343	2	NA	NA	-2676	3687	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6301	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCTGTCGTAAATGGCCC	2924	False	NA	NA	False	NA	NA	NA	77843197	77855013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852415_77852656_77852790_77854882
ENSMUSG00000097057.2_77843198_77855013_2	chr15	+	1884	15	NNC	ENSMUSG00000097057.2	novel	4343	2	NA	NA	-2676	3687	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2996	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCTGTCGTAAATGGCCC	2924	False	NA	NA	False	NA	NA	NA	77843197	77855013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_77843323_77843711_77843996_77844168_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ENSMUSG00000097057.2_77843198_77855013_3	chr15	+	1888	15	NNC	ENSMUSG00000097057.2	novel	4343	2	NA	NA	-2676	3687	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2512	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCTGTCGTAAATGGCCC	2924	False	NA	NA	False	NA	NA	NA	77843197	77855013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846056_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ENSMUSG00000097057.2_77843198_77855013_4	chr15	+	1892	15	NNC	ENSMUSG00000097057.2	novel	4343	2	NA	NA	-2676	3687	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3067	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCTGTCGTAAATGGCCC	2924	False	NA	NA	False	NA	NA	NA	77843197	77855013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852783_77854882
ENSMUSG00000097057.2_77843198_77855013_5	chr15	+	1889	14	NNC	ENSMUSG00000097057.2	novel	4343	2	NA	NA	-2676	3687	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCTGTCGTAAATGGCCC	2924	False	NA	NA	False	NA	NA	NA	77843197	77855013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852620_77852790_77854882
ENSMUSG00000097077.2_56266174_56274951_1	chr17	-	1326	8	NIC	ENSMUSG00000097077.2	novel	1960	3	NA	NA	-8570	-4403	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCGCCTCAGTGTCGCCA	1810	False	NA	NA	False	NA	NA	NA	56274951	56266173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
ENSMUSG00000097080.9_38383312_38395682_1	chr18	-	2389	13	NNC	ENSMUSG00000097080.9	novel	1173	2	NA	NA	-12064	-11125	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGCAAGGAGCCCTGCC	NA	False	NA	NA	False	NA	NA	NA	38395682	38383311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_38383453_38384138_38384254_38384340_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
ENSMUSG00000097119.3_45722872_45744663_1	chr17	+	1588	10	NIC	ENSMUSG00000097119.3	novel	437	3	NA	NA	-21652	-2454	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGCGAGATGCCAGAGTT	NA	False	NA	NA	False	AAAACA	-5	NA	45722871	45744663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ENSMUSG00000097133.2_71886045_71956344_1	chr6	-	6101	34	NIC	ENSMUSG00000097133.2	novel	1719	3	NA	NA	-15585	52084	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	486	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCGCTTGCGTGCGAGAA	NA	False	NA	NA	False	NA	NA	NA	71956344	71886044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ENSMUSG00000097149.2_30829552_30851494_1	chr7	+	2759	19	Genic_Genomic	ENSMUSG00000097149.2	novel	2135	3	NA	NA	-19401	-638	multi-exon	FALSE	non_canonical	0	0	junction_1	0	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAAGCCCTACCCTGG	NA	False	NA	NA	False	NA	NA	NA	30829551	30851494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30851261
ENSMUSG00000097167.2_95124768_95126858_1	chr3	+	711	2	ISM	ENSMUSG00000097167.2	ENSMUST00000181819.2	956	4	0	7111	0	-7111	5prime_fragment	FALSE	canonical	3	12	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGCGATGTTTTTCCTCA	246	False	NA	NA	False	ATTAAA	-17	NA	95124767	95126858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_95125370_95126749
ENSMUSG00000097170.2_141142121_141211564_1	chr7	-	3251	22	NIC	ENSMUSG00000097170.2	novel	2620	4	NA	NA	-17904	47858	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCGCTGGCGCGCACGC	4124	False	NA	NA	False	NA	NA	NA	141211564	141142120	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ENSMUSG00000097195.11_88403105_88404941_1	chr9	-	669	5	NNC	ENSMUSG00000097195.11	novel	939	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	469.34069448536	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_88403496_88403966_88404029_88404359_88404435_88404536_88404640_88404903
ENSMUSG00000097195.11_88403105_88404941_2	chr9	-	664	5	NNC	ENSMUSG00000097195.11	novel	939	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	474.860176788915	7381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536_88404633_88404903
ENSMUSG00000097195.11_88403105_88404941_3	chr9	-	671	5	NIC	ENSMUSG00000097195.11	novel	939	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	461	junction_1	309.579553588411	9152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536_88404640_88404903
ENSMUSG00000097195.11_88403105_88404941_4	chr9	-	690	6	NNC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_5	420.463268312465	1560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404592_88404903
ENSMUSG00000097195.11_88403105_88404941_5	chr9	-	1266	3	NIC	ENSMUSG00000097195.11	novel	1534	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	461	junction_1	364.5	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_88403502_88403970_88404435_88404536
ENSMUSG00000097221.2_12321912_12351353_1	chr15	-	2278	4	Genic_Genomic	ENSMUSG00000097221.2	novel	462	1	NA	NA	-29368	-388	multi-exon	FALSE	non_canonical	0	0	junction_1	0	377	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTCCCGCCGCCCGCTCC	NA	False	NA	NA	False	NA	NA	NA	12351353	12321911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_-_12322043_12339713_12339846_12343122_12343238_12349453
ENSMUSG00000097248.10_88199744_88252182_1	chr8	+	553	5	NIC	ENSMUSG00000097248.10	novel	432	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	86.1434124004848	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTCCATTCCTCCT	209	False	NA	7	True	AATAAA	-15	NA	88199743	88252182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_88199859_88240436_88240525_88248363_88248442_88250923_88251056_88252042
ENSMUSG00000097253.3_128333963_128339874_1	chr6	+	1643	4	NIC	ENSMUSG00000097253.3	novel	2237	2	NA	NA	996	4074	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGATTGGCGACGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	128333962	128339874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_128335157_128336068_128336318_128339020_128339148_128339801
ENSMUSG00000097253.3_128334328_128339874_1	chr6	+	1278	4	NIC	ENSMUSG00000097253.3	novel	2237	2	NA	NA	1361	4074	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGATTGGCGACGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	128334327	128339874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_128335157_128336068_128336318_128339020_128339148_128339801
ENSMUSG00000097277.8_81173319_81181250_1	chr7	+	780	4	NIC	ENSMUSG00000097277.8	novel	725	4	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	41.2148840428633	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGGTATTATGTTTT	NA	False	NA	12	True	AATAAA	-17	NA	81173318	81181250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_81173472_81178534_81178689_81179094_81179276_81180958
ENSMUSG00000097290.10_21613112_21627790_1	chr16	+	772	5	NIC	ENSMUSG00000097290.10	novel	701	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	57.7164404654341	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGTTGAAAGGTCCATG	NA	False	NA	30	True	AATAAA	-35	NA	21613111	21627790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_21613197_21614599_21614726_21619464_21619587_21620030_21620107_21627427
ENSMUSG00000097309.3_84458156_84520110_1	chr10	-	2200	19	NIC	ENSMUSG00000097309.3	novel	3500	2	NA	NA	-61668	-3951	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTGACCGAGCCGGATG	7601	False	NA	NA	False	NA	NA	NA	84520110	84458155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040
ENSMUSG00000097313.3_29757637_29765396_1	chr16	-	374	2	ISM	ENSMUSG00000097313.3	ENSMUST00000232297.2	699	4	-62	31295	-61	5561	5prime_fragment	FALSE	canonical	3	93	junction_1	0	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTAATGATAGCGGTGT	NA	False	NA	NA	False	ATTAAA	-40	NA	29765396	29757636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_29757886_29765271
ENSMUSG00000097313.3_29757691_29765572_1	chr16	-	496	2	ISM	ENSMUSG00000097313.3	ENSMUST00000232297.2	699	4	-238	31349	0	5507	5prime_fragment	FALSE	canonical	3	93	junction_1	0	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAATTATTAAATGATC	NA	False	NA	NA	False	NA	NA	NA	29765572	29757690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_29757886_29765271
ENSMUSG00000097318.3_33193637_33201097_1	chr16	-	717	3	NNC	ENSMUSG00000097318.3	novel	737	2	NA	NA	0	6587	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	4	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAGAACAGGCTTGCC	NA	False	NA	NA	False	NA	NA	NA	33201097	33193636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_33194022_33200608_33200729_33200885
ENSMUSG00000097360.9_67701353_67709355_1	chr13	+	382	3	NNC	ENSMUSG00000097360.9	novel	1084	4	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	3.5	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTAGTTCAGTAGCACA	NA	False	NA	NA	False	ATTAAA	-18	NA	67701352	67709355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_67701473_67701692_67701749_67709149
ENSMUSG00000097379.3_17594571_17613998_1	chr17	-	2057	10	NIC	ENSMUSG00000097379.3	novel	2529	5	NA	NA	18257	15634	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGATTGGAATTAAGGCCG	NA	False	NA	NA	False	NA	NA	NA	17613998	17594570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ENSMUSG00000097379.3_17594834_17613998_1	chr17	-	1794	10	NIC	ENSMUSG00000097379.3	novel	2529	5	NA	NA	18257	15371	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACGCAAAGTTGCTGGGT	NA	False	NA	NA	False	NA	NA	NA	17613998	17594833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ENSMUSG00000097379.3_17594834_17614230_1	chr17	-	2119	11	NNC	ENSMUSG00000097379.3	novel	2529	5	NA	NA	18025	15371	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	929	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACGCAAAGTTGCTGGGT	NA	False	NA	NA	False	NA	NA	NA	17614230	17594833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_17594933_17597007_17597101_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ENSMUSG00000097379.3_17594834_17614230_2	chr17	-	2026	10	NIC	ENSMUSG00000097379.3	novel	2529	5	NA	NA	18025	15371	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACGCAAAGTTGCTGGGT	NA	False	NA	NA	False	NA	NA	NA	17614230	17594833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ENSMUSG00000097397.3_4756976_4758883_1	chr16	-	1259	3	NNC	ENSMUSG00000097397.3	novel	1694	3	NA	NA	-1386	-4063	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1651	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCATGCGCGACCCCGCC	NA	False	NA	NA	False	NA	NA	NA	4758883	4756975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_4757158_4757241_4757495_4758059
ENSMUSG00000097398.3_88682676_88683458_1	chr1	+	301	2	NIC	ENSMUSG00000097398.3	novel	358	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	0	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGTCTTGGCTCCTT	NA	False	NA	17	True	NA	NA	NA	88682675	88683458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_88682774_88683255
ENSMUSG00000097403.3_136343009_136367896_1	chr1	-	2076	7	NIC	ENSMUSG00000097403.3	novel	2097	3	NA	NA	-24639	-2428	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGCCCTCGCGGTGACGC	NA	False	NA	NA	False	NA	NA	NA	136367896	136343008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_136343162_136344319_136345135_136347147_136347316_136360049_136360302_136361450_136361604_136362243_136362373_136367490
ENSMUSG00000097404.3_6038574_6065236_1	chr19	+	3060	21	Genic_Genomic	ENSMUSG00000097404.3	novel	1969	5	NA	NA	-24076	-3256	multi-exon	FALSE	non_canonical	0	0	junction_1	0	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTCCCTGCCCTCCTCCC	1858	False	NA	NA	False	NA	NA	NA	6038573	6065236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr19_+_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
ENSMUSG00000097411.3_118516803_118523296_1	chr13	+	941	5	Genic_Genomic	ENSMUSG00000097411.3	novel	1494	1	NA	NA	-6363	-1363	multi-exon	FALSE	non_canonical	0	0	junction_1	0	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCGGGGCCGGCGGCGCC	NA	False	NA	NA	False	NA	NA	NA	118516802	118523296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ENSMUSG00000097412.3_86521389_86524760_1	chr10	+	564	3	FSM	ENSMUSG00000097412.3	ENSMUST00000218095.2	1622	3	0	1058	0	267	multi-exon	FALSE	canonical	3	71	junction_1	95.5	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTCTTACTATACATTC	NA	False	NA	NA	False	NA	NA	NA	86521388	86524760	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_86521473_86521743_86521861_86524397
ENSMUSG00000097412.3_86526704_86541326_1	chr10	+	2778	18	Genic_Genomic	ENSMUSG00000097412.3	novel	323	4	NA	NA	4951	10656	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCGCGCGCAGGTCGGG	NA	False	NA	NA	False	NA	NA	NA	86526703	86541326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr10_+_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ENSMUSG00000097414.3_98710678_98729335_1	chr15	+	2128	12	NIC	ENSMUSG00000097414.3	novel	2224	3	NA	NA	-531	15377	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	775	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCAGCTTGGAAAGCTC	2441	False	NA	NA	False	NA	NA	NA	98710677	98729335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98728767
ENSMUSG00000097414.3_98710678_98729351_1	chr15	+	1601	12	NIC	ENSMUSG00000097414.3	novel	2224	3	NA	NA	-531	15393	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	872	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCTGGCGCCAGACCCC	2441	False	NA	NA	False	NA	NA	NA	98710677	98729351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_+_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
ENSMUSG00000097415.3_75418786_75431847_1	chr7	-	1380	3	FSM	ENSMUSG00000097415.3	ENSMUST00000181224.2	656	3	0	-724	0	0	multi-exon	FALSE	canonical	3	19	junction_1	6.5	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTAGTGGTCTTGCCC	NA	False	NA	0	True	NA	NA	NA	75431847	75418785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_75419986_75430372_75430505_75431799
ENSMUSG00000097415.3_75429837_75431847_1	chr7	-	716	2	ISM	ENSMUSG00000097415.3	ENSMUST00000181224.2	656	3	0	10327	0	-10327	5prime_fragment	FALSE	canonical	3	32	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATCCTCACCTCCACCC	NA	False	NA	NA	False	NA	NA	NA	75431847	75429836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_-_75430505_75431799
ENSMUSG00000097419.2_144944884_144994542_1	chr6	+	2512	11	Genic_Genomic	ENSMUSG00000097419.2	novel	2461	2	NA	NA	-48401	-1614	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGCTCAGGAGCACCCG	NA	False	NA	NA	False	NA	NA	NA	144944883	144994542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_144946031_144950076_144950152_144953341_144953477_144955771_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_144994288
ENSMUSG00000097439.7_21141027_21150116_1	chr9	+	2921	6	NIC	ENSMUSG00000097439.7	novel	508	5	NA	NA	4328	5774	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCCGCGCGGGTCACGGT	4267	False	NA	NA	False	NA	NA	NA	21141026	21150116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
ENSMUSG00000097439.7_21141363_21150116_1	chr9	+	2585	6	NIC	ENSMUSG00000097439.7	novel	508	5	NA	NA	4664	5774	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCCGCGCGGGTCACGGT	4603	False	NA	NA	False	NA	NA	NA	21141362	21150116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
ENSMUSG00000097445.2_57428557_57439710_1	chr9	-	637	5	NNC	ENSMUSG00000097445.2	novel	2505	2	NA	NA	5202	10013	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3701	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGGTACAGCAGTTCGCG	9623	False	NA	NA	False	NA	NA	NA	57439710	57428556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_57428699_57436238_57436356_57437523_57437646_57438951_57439076_57439578
ENSMUSG00000097445.2_57428557_57439710_2	chr9	-	645	5	NNC	ENSMUSG00000097445.2	novel	2505	2	NA	NA	5202	10013	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	14594	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGGTACAGCAGTTCGCG	9623	False	NA	NA	False	NA	NA	NA	57439710	57428556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_57428699_57436238_57436356_57437523_57437640_57438951_57439076_57439564
ENSMUSG00000097445.2_57428557_57439710_3	chr9	-	651	5	NIC	ENSMUSG00000097445.2	novel	2505	2	NA	NA	5202	10013	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	28139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGGTACAGCAGTTCGCG	9623	False	NA	NA	False	NA	NA	NA	57439710	57428556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_57428699_57436238_57436356_57437523_57437646_57438951_57439076_57439564
ENSMUSG00000097445.2_57428557_57439710_4	chr9	-	645	5	NNC	ENSMUSG00000097445.2	novel	2505	2	NA	NA	5202	10013	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	10417	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGGTACAGCAGTTCGCG	9623	False	NA	NA	False	NA	NA	NA	57439710	57428556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_57428699_57436238_57436350_57437523_57437646_57438951_57439076_57439564
ENSMUSG00000097445.2_57428557_57439710_5	chr9	-	606	5	NNC	ENSMUSG00000097445.2	novel	2505	2	NA	NA	5202	10013	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1123	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGGTACAGCAGTTCGCG	9623	False	NA	NA	False	NA	NA	NA	57439710	57428556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_57428699_57436238_57436356_57437523_57437646_57438996_57439076_57439564
ENSMUSG00000097445.2_57428557_57439710_6	chr9	-	644	5	NNC	ENSMUSG00000097445.2	novel	2505	2	NA	NA	5202	10013	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	12653	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGGTACAGCAGTTCGCG	9623	False	NA	NA	False	NA	NA	NA	57439710	57428556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_57428699_57436238_57436356_57437523_57437646_57438958_57439076_57439564
ENSMUSG00000097445.2_57428557_57439710_7	chr9	-	656	5	NNC	ENSMUSG00000097445.2	novel	2505	2	NA	NA	5202	10013	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	23189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGGTACAGCAGTTCGCG	9623	False	NA	NA	False	NA	NA	NA	57439710	57428556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_57428704_57436238_57436356_57437523_57437646_57438951_57439076_57439564
ENSMUSG00000097451.12_109612564_109628150_1	chr12	+	3221	10	NIC	ENSMUSG00000097451.12	novel	2746	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	66	junction_7	180.249484169054	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
ENSMUSG00000097451.12_109612564_109628150_2	chr12	+	2370	11	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	190.764252416432	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624491_109624556_109626156_109626242_109627179
ENSMUSG00000097451.12_109612564_109628150_3	chr12	+	2322	10	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	206.409756683934	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624486_109624556_109626156_109626242_109627179
ENSMUSG00000097451.12_109612564_109628150_4	chr12	+	3230	10	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	549	junction_7	35.1002092779804	1559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ENSMUSG00000097451.12_109612564_109628150_5	chr12	+	2366	11	ISM	ENSMUSG00000097451.12	ENSMUST00000238333.2	2746	13	1254	0	0	0	3prime_fragment	FALSE	canonical	3	66	junction_8	178.955888419465	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
ENSMUSG00000097451.12_109617102_109628150_1	chr12	+	1918	8	FSM	ENSMUSG00000097451.12	ENSMUST00000238357.2	1651	8	0	-267	0	0	multi-exon	FALSE	canonical	3	23	junction_5	215.030040616066	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	1330	False	NA	NA	False	ACTAAA	-5	NA	109617101	109628150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624491_109624556_109626156_109626242_109627179
ENSMUSG00000097451.12_109617102_109628150_2	chr12	+	1870	7	NIC	ENSMUSG00000097451.12	novel	1929	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	238.812339156362	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	1330	False	NA	NA	False	ACTAAA	-5	NA	109617101	109628150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624486_109624556_109626156_109626242_109627179
ENSMUSG00000097451.12_109617102_109628150_3	chr12	+	1865	7	NIC	ENSMUSG00000097451.12	novel	1929	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	233.986051341148	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	1330	False	NA	NA	False	ACTAAA	-5	NA	109617101	109628150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_+_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624491_109624556_109626156_109626242_109627179
ENSMUSG00000097451.12_109617102_109628150_4	chr12	+	1914	8	ISM	ENSMUSG00000097451.12	ENSMUST00000238333.2	2746	13	5792	0	0	0	3prime_fragment	FALSE	canonical	3	66	junction_5	200.057746765319	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	1330	False	NA	NA	False	ACTAAA	-5	NA	109617101	109628150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
ENSMUSG00000097451.12_109617102_109628150_5	chr12	+	1923	8	FSM	ENSMUSG00000097451.12	ENSMUST00000238384.2	2352	8	429	0	0	0	multi-exon	FALSE	canonical	3	549	junction_5	36.3862499259469	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	1330	False	NA	NA	False	ACTAAA	-5	NA	109617101	109628150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ENSMUSG00000097472.2_72889102_72906612_1	chr8	-	1755	8	NIC	ENSMUSG00000097472.2	novel	1745	2	NA	NA	-11948	2131	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGCCGGGGCCGCCCCC	NA	False	NA	NA	False	NA	NA	NA	72906612	72889101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUSG00000097472.2_72889102_72906986_1	chr8	-	2129	8	NIC	ENSMUSG00000097472.2	novel	1745	2	NA	NA	-12322	2131	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGCCGGGGCCGCCCCC	NA	False	NA	NA	False	NA	NA	NA	72906986	72889101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUSG00000097472.2_72889418_72906986_1	chr8	-	2105	8	NNC	ENSMUSG00000097472.2	novel	1745	2	NA	NA	-12322	1815	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	808	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCATGCGGAGCTGGGA	NA	False	NA	NA	False	NA	NA	NA	72906986	72889417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_72889590_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUSG00000097472.2_72889652_72906986_1	chr8	-	2270	8	NNC	ENSMUSG00000097472.2	novel	1745	2	NA	NA	-12322	1581	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	862	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACGTGCCGGGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	72906986	72889651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_72889989_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUSG00000097472.2_72889652_72906986_2	chr8	-	2046	8	NIC	ENSMUSG00000097472.2	novel	1745	2	NA	NA	-12322	1581	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	862	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACGTGCCGGGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	72906986	72889651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_72889765_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUSG00000097483.3_66651224_66667587_1	chr13	-	1096	4	NNC	ENSMUSG00000097483.3	novel	1519	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	25.7207222984806	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGAACTGTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	66667587	66651223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_66652035_66652807_66652875_66653226_66653268_66667410
ENSMUSG00000097483.3_66651224_66667587_2	chr13	-	1161	4	FSM	ENSMUSG00000097483.3	ENSMUST00000180403.3	1519	4	364	-6	0	0	multi-exon	FALSE	canonical	3	52	junction_2	5.09901951359278	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGAACTGTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	66667587	66651223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_66652035_66652807_66652875_66653161_66653268_66667410
ENSMUSG00000097502.3_59882376_59885288_1	chr13	+	452	3	NNC	ENSMUSG00000097502.3	novel	1239	3	NA	NA	912	4	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_2	0.5	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGTAGATGATGTTTAA	6325	False	NA	NA	False	AATAAA	-17	NA	59882375	59885288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_59882455_59882560_59882653_59885007
ENSMUSG00000097525.3_127064433_127086513_1	chr6	+	1295	6	Genic_Genomic	ENSMUSG00000097525.3	novel	1466	3	NA	NA	-12827	-917	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1089	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCGTCTGCACGGCGGA	NA	False	NA	NA	False	NA	NA	NA	127064432	127086513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_127065266_127066155_127066267_127068146_127068225_127069583_127069700_127078807_127078850_127086398
ENSMUSG00000097525.3_127064433_127086513_2	chr6	+	1291	6	Genic_Genomic	ENSMUSG00000097525.3	novel	1466	3	NA	NA	-12827	-917	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1409	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCGTCTGCACGGCGGA	NA	False	NA	NA	False	NA	NA	NA	127064432	127086513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_127065260_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ENSMUSG00000097532.3_95334642_95338400_2	chr3	+	1141	3	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-340	2	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	55	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGTGTCTTCCTCTAT	NA	False	NA	10	True	AGTAAA	-24	NA	95334641	95338400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95334711_95335864_95336134_95337597
ENSMUSG00000097532.3_95334642_95338400_3	chr3	+	896	4	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-340	2	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	52.0917993119412	261	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGTGTCTTCCTCTAT	NA	False	NA	10	True	AGTAAA	-24	NA	95334641	95338400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95334711_95335864_95336134_95337597_95337750_95337994
ENSMUSG00000097532.3_95334982_95338400_1	chr3	+	852	4	NNC	ENSMUSG00000097532.3	novel	2559	2	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	55.6437078403499	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGTGTCTTCCTCTAT	NA	False	NA	10	True	AGTAAA	-24	NA	95334981	95338400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_95335007_95335864_95336134_95337597_95337750_95337994
ENSMUSG00000097620.8_140842624_140866679_1	chr4	+	998	4	NNC	ENSMUSG00000097620.8	novel	2114	3	NA	NA	-347	21281	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCAGACGGAGCTCAAGA	NA	False	NA	NA	False	NA	NA	NA	140842623	140866679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_140843176_140845837_140846093_140847634_140847685_140866538
ENSMUSG00000097620.8_140842624_140867077_1	chr4	+	1036	5	NNC	ENSMUSG00000097620.8	novel	2114	3	NA	NA	-347	21679	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	617	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAACCCCTCCCCGCGCCT	NA	False	NA	NA	False	NA	NA	NA	140842623	140867077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr4_+_140843176_140843847_140843952_140845837_140846093_140847634_140847685_140867002
ENSMUSG00000097624.3_15451843_15461045_1	chr17	-	1192	5	NNC	ENSMUSG00000097624.3	novel	1179	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	14.4805904575746	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTTTTCTTTCTTTCT	NA	False	NA	-4	True	GATAAA	-16	NA	15461045	15451842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_15452674_15453032_15453145_15454190_15454265_15460531_15460624_15460962
ENSMUSG00000097624.3_15451843_15461045_2	chr17	-	1006	3	NIC	ENSMUSG00000097624.3	novel	1179	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	27.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTTTTCTTTCTTTCT	NA	False	NA	-4	True	GATAAA	-16	NA	15461045	15451842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_15452674_15460531_15460624_15460962
ENSMUSG00000097639.3_41439898_41447627_1	chr3	-	1024	3	NNC	ENSMUSG00000097639.3	novel	2161	2	NA	NA	0	-1439	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	43	1234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGGACTCTTAACTGTG	NA	False	NA	NA	False	TTTAAA	-4	NA	41447627	41439897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_41440396_41443750_41444172_41447522
ENSMUSG00000097639.3_41443239_41447627_1	chr3	-	1038	2	FSM	ENSMUSG00000097639.3	ENSMUST00000199155.2	2161	2	-2	1125	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCTCCAAATCCTGAA	NA	False	NA	-3	True	NA	NA	NA	41447627	41443238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_41444172_41447522
ENSMUSG00000097641.3_4375603_4396785_1	chr18	-	2090	9	NNC	ENSMUSG00000097641.3	novel	3289	2	NA	NA	-16800	-1934	intron_retention	FALSE	non_canonical	0	0	junction_1	0	589	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGCCAAAGGTCAGCGGG	NA	False	NA	NA	False	NA	NA	NA	4396785	4375602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396109
ENSMUSG00000097665.2_21279167_21316617_1	chr9	-	3549	21	NIC	ENSMUSG00000097665.2	novel	1986	5	NA	NA	6399	37371	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCGGCCCGCCCCCGCA	5056	False	NA	NA	False	NA	NA	NA	21316617	21279166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ENSMUSG00000097665.2_21279167_21316617_2	chr9	-	3510	20	NIC	ENSMUSG00000097665.2	novel	1986	5	NA	NA	6399	37371	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCGGCCCGCCCCCGCA	5056	False	NA	NA	False	NA	NA	NA	21316617	21279166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ENSMUSG00000097665.2_21279234_21316659_1	chr9	-	3485	20	NIC	ENSMUSG00000097665.2	novel	1986	5	NA	NA	6357	37304	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	548	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGGACCGGGGGCGAGC	5014	False	NA	NA	False	GGGGCT	-43	NA	21316659	21279233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ENSMUSG00000097665.2_21279234_21316659_2	chr9	-	3524	21	NIC	ENSMUSG00000097665.2	novel	1986	5	NA	NA	6357	37304	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGGACCGGGGGCGAGC	5014	False	NA	NA	False	GGGGCT	-43	NA	21316659	21279233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ENSMUSG00000097680.2_135181317_135186195_1	chr1	+	1980	9	Genic_Genomic	ENSMUSG00000097680.2	novel	2782	3	NA	NA	5018	-7986	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1091	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGGCGCTGCCCCCAC	NA	False	NA	NA	False	AAGAAA	-42	NA	135181316	135186195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135186086
ENSMUSG00000097680.2_135181317_135186195_2	chr1	+	1920	9	Genic_Genomic	ENSMUSG00000097680.2	novel	2782	3	NA	NA	5018	-7986	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGGCGCTGCCCCCAC	NA	False	NA	NA	False	AAGAAA	-42	NA	135181316	135186195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135184965_135185352_135185521_135186086
ENSMUSG00000097680.2_135181317_135186195_3	chr1	+	1832	10	Genic_Genomic	ENSMUSG00000097680.2	novel	2782	3	NA	NA	5018	-7986	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGGCGCTGCCCCCAC	NA	False	NA	NA	False	AAGAAA	-42	NA	135181316	135186195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_135181885_135181972_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135184965_135185352_135185521_135186086
ENSMUSG00000097680.2_135181317_135186306_1	chr1	+	2091	9	Genic_Genomic	ENSMUSG00000097680.2	novel	2782	3	NA	NA	5018	-7875	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGATTTCCTGGCCTTC	NA	False	NA	NA	False	NA	NA	NA	135181316	135186306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135186086
ENSMUSG00000097680.2_135181317_135186306_2	chr1	+	2031	9	Genic_Genomic	ENSMUSG00000097680.2	novel	2782	3	NA	NA	5018	-7875	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGATTTCCTGGCCTTC	NA	False	NA	NA	False	NA	NA	NA	135181316	135186306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135184965_135185352_135185521_135186086
ENSMUSG00000097685.3_79527475_79570389_1	chr7	+	2681	7	NNC	ENSMUSG00000097685.3	novel	1490	2	NA	NA	-39210	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	918	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAACACTTCCTGTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	79527474	79570389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_79527736_79528457_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
ENSMUSG00000097685.3_79529511_79570389_1	chr7	+	1367	6	NIC	ENSMUSG00000097685.3	novel	1490	2	NA	NA	-37174	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	760	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAACACTTCCTGTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	79529510	79570389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
ENSMUSG00000097692.3_85858053_85884188_1	chr10	-	1656	9	Genic_Genomic	ENSMUSG00000097692.3	novel	1889	1	NA	NA	-25995	-409	multi-exon	FALSE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCGCGCCATCCCCCGAG	NA	False	NA	NA	False	NA	NA	NA	85884188	85858052	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr10_-_85858195_85860431_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ENSMUSG00000097692.3_85858053_85884188_2	chr10	-	1808	9	Genic_Genomic	ENSMUSG00000097692.3	novel	1889	1	NA	NA	-25995	-409	multi-exon	FALSE	non_canonical	0	0	junction_1	0	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCGCGCCATCCCCCGAG	NA	False	NA	NA	False	NA	NA	NA	85884188	85858052	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr10_-_85858195_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ENSMUSG00000097743.2_56905705_56934887_1	chr14	-	2975	14	NNC	ENSMUSG00000097743.2	novel	1299	3	NA	NA	1931	28032	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGTGAGGCAAGCCAGCC	NA	False	NA	NA	False	NA	NA	NA	56934887	56905704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_56906022_56909861_56910018_56911347_56912233_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ENSMUSG00000097743.2_56905705_56934887_2	chr14	-	2933	14	NNC	ENSMUSG00000097743.2	novel	1299	3	NA	NA	1931	28032	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1115	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGTGAGGCAAGCCAGCC	NA	False	NA	NA	False	NA	NA	NA	56934887	56905704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934593
ENSMUSG00000097743.2_56912045_56934887_1	chr14	-	1769	12	NIC	ENSMUSG00000097743.2	novel	1299	3	NA	NA	1931	21692	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTTCTAAAAAGGCATTC	NA	False	NA	NA	False	NA	NA	NA	56934887	56912044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ENSMUSG00000097763.2_87864910_87889373_1	chr6	-	2822	24	Genic_Genomic	ENSMUSG00000097763.2	novel	1115	3	NA	NA	2068	20915	multi-exon	TRUE	non_canonical	0	0	junction_1	0	963	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGGACTGCGCCTGCGC	NA	False	NA	NA	False	NA	NA	NA	87889373	87864909	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ENSMUSG00000097763.2_87864910_87889512_1	chr6	-	2955	24	Genic_Genomic	ENSMUSG00000097763.2	novel	1115	3	NA	NA	1929	20915	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1164	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGGACTGCGCCTGCGC	NA	False	NA	NA	False	NA	NA	NA	87889512	87864909	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880472_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ENSMUSG00000097763.2_87864910_87889512_2	chr6	-	2961	24	Genic_Genomic	ENSMUSG00000097763.2	novel	1115	3	NA	NA	1929	20915	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGGACTGCGCCTGCGC	NA	False	NA	NA	False	NA	NA	NA	87889512	87864909	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ENSMUSG00000097763.2_87864910_87890577_1	chr6	-	4026	24	Genic_Genomic	ENSMUSG00000097763.2	novel	1115	3	NA	NA	864	20915	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGGACTGCGCCTGCGC	NA	False	NA	NA	False	NA	NA	NA	87890577	87864909	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ENSMUSG00000097768.3_93589024_93591789_1	chr16	-	1687	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	9	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACACCTTTAAATAATA	6571	False	NA	NA	False	AATAAA	-28	NA	93591789	93589023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_93590271_93590397_93590505_93591456
ENSMUSG00000097768.3_93589024_93591789_2	chr16	-	1624	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	34	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACACCTTTAAATAATA	6571	False	NA	NA	False	AATAAA	-28	NA	93591789	93589023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_93590208_93590397_93590505_93591456
ENSMUSG00000097768.3_93589024_93591948_1	chr16	-	1846	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-159	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	9	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACACCTTTAAATAATA	6412	False	NA	NA	False	AATAAA	-28	NA	93591948	93589023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_93590271_93590397_93590505_93591456
ENSMUSG00000097772.8_100568701_100577374_3	chr5	-	693	4	ISM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	20	0	0	0	intron_retention	FALSE	canonical	3	348	junction_3	11.0453610171873	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTAGAATGTTGTGTT	NA	False	NA	-7	True	AATAAA	-31	NA	100577374	100568700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955
ENSMUSG00000097772.8_100568701_100577374_4	chr5	-	750	6	NNC	ENSMUSG00000097772.8	novel	626	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	170.027527183101	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTAGAATGTTGTGTT	NA	False	NA	-7	True	AATAAA	-31	NA	100577374	100568700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_100568832_100569826_100569901_100571146_100571291_100574594_100574664_100576955_100577098_100577184
ENSMUSG00000097779.3_53449053_53451162_1	chr19	+	1214	2	NNC	ENSMUSG00000097779.3	novel	1494	2	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	50	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGACTCAGCTCTGTTT	NA	False	NA	NA	False	AATAAA	-39	NA	53449052	53451162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_53449251_53450146
ENSMUSG00000097786.4_30847485_30873893_1	chr3	-	1363	9	Genic_Genomic	ENSMUSG00000097786.4	novel	995	1	NA	NA	-26180	-198	multi-exon	FALSE	non_canonical	0	0	junction_1	0	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGGTTCCTTCTGACGTG	NA	False	NA	NA	False	NA	NA	NA	30873893	30847484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_-_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873709
ENSMUSG00000097786.4_30847485_30874238_1	chr3	-	1708	9	Genic_Genomic	ENSMUSG00000097786.4	novel	995	1	NA	NA	-26525	-198	multi-exon	FALSE	non_canonical	0	0	junction_1	0	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGGTTCCTTCTGACGTG	NA	False	NA	NA	False	NA	NA	NA	30874238	30847484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_-_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873709
ENSMUSG00000097793.2_81931397_81945038_1	chr13	-	783	5	NNC	ENSMUSG00000097793.2	novel	4608	2	NA	NA	-13170	-4505	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCCACGCCTCGGGGAC	NA	False	NA	NA	False	NA	NA	NA	81945038	81931396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_81931477_81932759_81932896_81934961_81935077_81940080_81940267_81944772
ENSMUSG00000097793.2_81931397_81945038_2	chr13	-	789	5	NIC	ENSMUSG00000097793.2	novel	4608	2	NA	NA	-13170	-4505	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	3160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCCACGCCTCGGGGAC	NA	False	NA	NA	False	NA	NA	NA	81945038	81931396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944772
ENSMUSG00000097817.3_29886361_29898254_1	chr7	+	1624	12	NIC	ENSMUSG00000097817.3	novel	779	2	NA	NA	-7018	-1976	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCAAGGCTGACTTCG	8466	False	NA	NA	False	AATAAA	-3	NA	29886360	29898254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430_29894590_29898182
ENSMUSG00000097828.3_99481294_99552070_1	chr13	-	1846	11	NNC	ENSMUSG00000097828.3	novel	3997	2	NA	NA	-2686	52138	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGCGGGCGTGGGGGGA	NA	False	NA	NA	False	NA	NA	NA	99552070	99481293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_99481388_99484846_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
ENSMUSG00000097874.4_97798534_97811514_1	chr16	-	487	4	NIC	ENSMUSG00000097874.4	novel	720	2	NA	NA	-12895	-2671	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGACACCACCGCACCCG	NA	False	NA	NA	False	NA	NA	NA	97811514	97798533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_97798637_97809828_97809956_97810143_97810205_97811318
ENSMUSG00000097874.4_97798534_97817956_1	chr16	-	1310	6	NIC	ENSMUSG00000097874.4	novel	720	2	NA	NA	-19337	-2671	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGACACCACCGCACCCG	NA	False	NA	NA	False	NA	NA	NA	97817956	97798533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_97798637_97809828_97809956_97810143_97810205_97811318_97811369_97816865_97816920_97817041
ENSMUSG00000097876.2_56989225_56994936_1	chr16	+	2021	4	NNC	ENSMUSG00000097876.2	novel	1726	4	NA	NA	1461	160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	199	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCCACCTCCACTCCAC	NA	False	NA	NA	False	NA	NA	NA	56989224	56994936	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_56990804_56991985_56992181_56993386_56993523_56994825
ENSMUSG00000097876.2_56989225_57051756_1	chr16	+	3579	18	NIC	ENSMUSG00000097876.2	novel	1726	4	NA	NA	1461	56980	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTGGACCTGGCACCG	NA	False	NA	NA	False	NA	NA	NA	56989224	57051756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_+_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ENSMUSG00000097906.2_67958365_67959404_1	chr13	+	276	2	Genic_Genomic	ENSMUSG00000097906.2	novel	955	1	NA	NA	0	85	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCACATTCCCCATCAG	NA	False	NA	NA	False	AATAAA	-33	NA	67958364	67959404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_67958482_67959245
ENSMUSG00000097908.8_136948000_136962539_1	chr5	+	823	4	FSM	ENSMUSG00000097908.8	ENSMUST00000197095.5	617	4	-206	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	17.326921891156	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTTCATCTATGGTCT	NA	False	NA	NA	False	NA	NA	NA	136947999	136962539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_136948286_136951160_136951282_136954557_136954750_136962315
ENSMUSG00000097988.2_135036236_135037614_1	chr1	+	402	3	NIC	ENSMUSG00000097988.2	novel	915	3	NA	NA	-463	-3502	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTCCTTTGGTCCGGCC	NA	False	NA	NA	False	NA	NA	NA	135036235	135037614	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_135036434_135036656_135036793_135037546
ENSMUSG00000097988.2_135036236_135037965_2	chr1	+	887	6	NIC	ENSMUSG00000097988.2	novel	915	3	NA	NA	-463	-3151	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTGTATCCCGTGAGAC	NA	False	NA	NA	False	NA	NA	NA	135036235	135037965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_+_135036434_135036656_135036793_135037023_135037188_135037300_135037418_135037546_135037676_135037822
ENSMUSG00000097990.2_47489472_47525475_1	chr19	+	1909	10	Genic_Genomic	ENSMUSG00000097990.2	novel	2765	3	NA	NA	-11949	20458	multi-exon	FALSE	non_canonical	0	0	junction_1	0	454	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGAGCACACTCCCGCCG	NA	False	NA	NA	False	NA	NA	NA	47489471	47525475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr19_+_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ENSMUSG00000098022.8_29755462_29772226_1	chr7	-	1807	5	NIC	ENSMUSG00000098022.8	novel	2181	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	15.8804124631572	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGTTCCACTGTGTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	29772226	29755461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29772205
ENSMUSG00000098090.9_95057540_95082560_1	chr17	+	1159	9	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_3	47.0790558528949	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGTGTCCCCTCCCAT	NA	False	NA	NA	False	AATAAA	-14	NA	95057539	95082560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_95057661_95062638_95062734_95063861_95063952_95069889_95070049_95071199_95071353_95074284_95074376_95078561_95078667_95079284_95079389_95082319
ENSMUSG00000098090.9_95057540_95101578_8	chr17	+	453	5	NNC	ENSMUSG00000098090.9	novel	799	3	NA	NA	0	19018	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_1	29.2232783924049	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	11	True	AATAAA	-16	NA	95057539	95101578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092936_95101454
ENSMUSG00000098098.8_61772613_61780543_2	chr18	+	699	3	FSM	ENSMUSG00000098098.8	ENSMUST00000183087.2	588	3	-111	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	11.5	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAATGACTTTCTTAATAG	NA	False	NA	17	True	AATAAA	-17	NA	61772612	61780543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_61772840_61778233_61778437_61780274
ENSMUSG00000098098.8_61772724_61780543_1	chr18	+	385	2	NIC	ENSMUSG00000098098.8	novel	588	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAATGACTTTCTTAATAG	NA	False	NA	17	True	AATAAA	-17	NA	61772723	61780543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_+_61772840_61780274
ENSMUSG00000098098.8_61772724_61780543_2	chr18	+	644	4	NNC	ENSMUSG00000098098.8	novel	588	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	31.6262900483478	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAATGACTTTCTTAATAG	NA	False	NA	17	True	AATAAA	-17	NA	61772723	61780543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_61772840_61777285_61777342_61778233_61778437_61780274
ENSMUSG00000098112.9_100538964_100567436_1	chr15	-	1993	12	NNC	ENSMUSG00000098112.9	novel	2036	11	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	non_canonical	1	10	junction_1	41.9606269599971	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGGTGTCTTGCCCTGAA	NA	False	NA	-5	True	AATAAA	-17	NA	100567436	100538963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_100539166_100539204_100539446_100542693_100543421_100546960_100547044_100548080_100548157_100549839_100549926_100550265_100550374_100554075_100554172_100554590_100554686_100554940_100554996_100560397_100560479_100567293
ENSMUSG00000098161.2_118232912_118235202_1	chr9	-	697	4	NNC	ENSMUSG00000098161.2	novel	388	4	NA	NA	-35	253	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	17.5562587763516	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGGCTTTATTTATGTTG	NA	False	NA	NA	False	CATAAA	-14	NA	118235202	118232911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_118233232_118233371_118233558_118233797_118233891_118235104
ENSMUSG00000098176.3_75852520_75853804_1	chr15	-	1172	2	FSM	ENSMUSG00000098176.3	ENSMUST00000183130.3	2458	2	487	799	487	-799	multi-exon	FALSE	canonical	3	5	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGACGCTCTGACAC	NA	False	NA	NA	False	AATAAA	-13	NA	75853804	75852519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75853537_75853649
ENSMUSG00000098183.2_61863570_61864299_1	chr14	-	251	2	NNC	ENSMUSG00000098183.2	novel	863	2	NA	NA	487	-195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4731	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAAGTATTTCTTGAGC	NA	False	NA	NA	False	NA	NA	NA	61864299	61863569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_61863744_61864222
ENSMUSG00000098184.2_122677314_122752917_1	chr8	-	2081	12	Genic_Genomic	ENSMUSG00000098184.2	novel	972	1	NA	NA	-75533	-901	multi-exon	FALSE	non_canonical	0	0	junction_1	0	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTCTGCGCAGGCGCCG	NA	False	NA	NA	False	NA	NA	NA	122752917	122677313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
ENSMUSG00000098184.2_122677314_122752917_2	chr8	-	2198	13	Genic_Genomic	ENSMUSG00000098184.2	novel	972	1	NA	NA	-75533	-901	multi-exon	FALSE	non_canonical	0	0	junction_1	0	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTCTGCGCAGGCGCCG	NA	False	NA	NA	False	NA	NA	NA	122752917	122677313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
ENSMUSG00000098197.3_34313477_34314207_1	chr17	-	454	3	Genic_Genomic	ENSMUSG00000098197.3	novel	1668	5	NA	NA	49	-10550	multi-exon	FALSE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAACTTCCGGAACCTG	1706	False	NA	NA	False	NA	NA	NA	34314207	34313476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_-_34313564_34313656_34313793_34313976
ENSMUSG00000098234.8_10012250_10014343_1	chr1	-	1709	3	FSM	ENSMUSG00000098234.8	ENSMUST00000182819.8	816	3	-895	2	0	0	multi-exon	FALSE	canonical	3	538	junction_1	75	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTGTGGGCAGTAATT	NA	False	NA	-15	True	AATAAA	-12	NA	10014343	10012249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_10012381_10012547_10012617_10012834
ENSMUSG00000098274.8_55786784_55791798_1	chr16	+	519	6	NNC	ENSMUSG00000098274.8	novel	677	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5218.49868832023	70914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	55786783	55791798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791685
ENSMUSG00000098274.8_55786784_55791798_2	chr16	+	531	6	FSM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	146	0	0	0	multi-exon	FALSE	canonical	3	9815	junction_1	1495.09793659145	113312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	55786783	55791798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791673
ENSMUSG00000098318.8_134905955_134928539_1	chr6	+	540	2	FSM	ENSMUSG00000098318.8	ENSMUST00000183867.7	5662	2	-100	5222	-100	1	multi-exon	FALSE	canonical	3	145	junction_1	0	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTTTCTGGGCTCTGT	7865	False	NA	25	True	NA	NA	NA	134905954	134928539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_134906224_134928268
ENSMUSG00000098318.8_134906096_134928539_3	chr6	+	399	2	FSM	ENSMUSG00000098318.8	ENSMUST00000183867.7	5662	2	41	5222	0	1	multi-exon	FALSE	canonical	3	145	junction_1	0	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTTTCTGGGCTCTGT	8006	False	NA	25	True	NA	NA	NA	134906095	134928539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_134906224_134928268
ENSMUSG00000098609.2_25842607_25887228_1	chr14	-	2445	16	Genic_Genomic	ENSMUSG00000098609.2	novel	2479	2	NA	NA	-16538	14594	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACTCTCCGGGCGCGG	NA	False	NA	NA	False	NA	NA	NA	25887228	25842606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr14_-_25842720_25843130_25843209_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ENSMUSG00000098702.2_61863332_61870428_1	chr18	+	1698	5	Genic_Genomic	ENSMUSG00000098702.2	novel	890	2	NA	NA	3828	1440	multi-exon	FALSE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGTGACGTCACTCACA	NA	False	NA	NA	False	NA	NA	NA	61863331	61870428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_+_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870253
ENSMUSG00000098721.3_70641758_70663341_1	chr18	+	2330	9	Genic_Genomic	ENSMUSG00000098721.3	novel	104	1	NA	NA	-8099	13381	multi-exon	FALSE	non_canonical	0	0	junction_1	0	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGACTCCACCCCCATCTT	NA	False	NA	NA	False	NA	NA	NA	70641757	70663341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_+_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658414_70658600_70659627_70659793_70663258
ENSMUSG00000098789.8_119857974_119863075_1	chr2	+	1436	8	ISM	ENSMUSG00000033852.17	ENSMUST00000162393.8	5092	27	0	10439	0	-2399	5prime_fragment	FALSE	canonical	3	18	junction_5	45.292248289327	756	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857973	119863075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119861982_119862133_119862321_119862482_119862594
ENSMUSG00000098789.8_119857974_119863075_2	chr2	+	1267	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	49.0736408087093	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857973	119863075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119862055_119862133_119862321_119862482_119862594
ENSMUSG00000098789.8_119857974_119863075_3	chr2	+	1286	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	49.2084568161025	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857973	119863075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862321_119862482_119862594
ENSMUSG00000098894.2_76219740_76228128_1	chr9	+	633	3	NNC	ENSMUSG00000098894.2	novel	581	2	NA	NA	-7119	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	3	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCAGACTTGACAGTGA	NA	False	NA	NA	False	AATAAA	-22	NA	76219739	76228128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_76219851_76226917_76227020_76227708
ENSMUSG00000098894.2_76219740_76228600_1	chr9	+	1105	3	NNC	ENSMUSG00000098894.2	novel	581	2	NA	NA	-7119	472	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	3	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTTTATAACTATTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	76219739	76228600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_76219851_76226917_76227020_76227708
ENSMUSG00000098894.2_76221452_76228128_1	chr9	+	644	3	NNC	ENSMUSG00000098894.2	novel	581	2	NA	NA	-5407	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	4	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCAGACTTGACAGTGA	NA	False	NA	NA	False	AATAAA	-22	NA	76221451	76228128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_76221574_76226917_76227020_76227708
ENSMUSG00000098923.2_119454172_119455953_1	chr1	+	1406	2	FSM	ENSMUSG00000098923.2	ENSMUST00000183607.2	681	2	269	-994	269	-760	multi-exon	FALSE	canonical	2	5	junction_1	0	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTCTGTGTGAAGATA	215	False	NA	32	True	NA	NA	NA	119454171	119455953	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_119454278_119454653
ENSMUSG00000098950.8_155936802_155953842_1	chr2	-	3709	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	34	2924	-6	2603	multi-exon	FALSE	canonical	3	245	junction_2	24	629	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTATGTACCTTTAT	NA	False	NA	-12	True	AATAAA	-16	NA	155953842	155936801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155940293_155945268_155945350_155953705
ENSMUSG00000099354.7_83738738_83739925_1	chr6	-	647	2	FSM	ENSMUSG00000099354.7	ENSMUST00000189308.3	546	2	-101	0	-78	0	multi-exon	FALSE	canonical	1	1	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGGCTGGTGACCCTCA	NA	False	NA	NA	False	AATAAA	-21	NA	83739925	83738737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83739043_83739583
ENSMUSG00000099370.2_75554753_75563038_1	chr3	-	1887	2	NIC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	230	junction_1	0	1855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCTCATGGTCATGGTG	NA	False	NA	-5	True	NA	NA	NA	75563038	75554752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_75556298_75562696
ENSMUSG00000099370.2_75554753_75563059_1	chr3	-	1783	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-21	0	intron_retention	FALSE	canonical	3	71	junction_2	79.5	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCTCATGGTCATGGTG	NA	False	NA	-5	True	NA	NA	NA	75563059	75554752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_75556298_75562696_75562869_75562993
ENSMUSG00000099370.2_75554753_75563059_2	chr3	-	1833	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-21	0	intron_retention	FALSE	canonical	3	11	junction_2	109.5	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCTCATGGTCATGGTG	NA	False	NA	-5	True	NA	NA	NA	75563059	75554752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_75556298_75562696_75562888_75562962
ENSMUSG00000099370.2_75554753_75563059_3	chr3	-	1814	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-21	0	intron_retention	FALSE	canonical	3	25	junction_2	102.5	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCTCATGGTCATGGTG	NA	False	NA	-5	True	NA	NA	NA	75563059	75554752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_75556298_75562696_75562869_75562962
ENSMUSG00000099370.2_75555289_75563038_1	chr3	-	1351	2	ISM	ENSMUSG00000099370.2	ENSMUST00000190602.2	1026	3	0	536	0	-142	5prime_fragment	FALSE	canonical	3	230	junction_1	0	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGGTGGTCTCCATTCT	NA	False	NA	-4	True	AATAAA	-15	NA	75563038	75555288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_75556298_75562696
ENSMUSG00000099370.2_75555289_75563059_1	chr3	-	1297	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-21	-142	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	109.5	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGGTGGTCTCCATTCT	NA	False	NA	-4	True	AATAAA	-15	NA	75563059	75555288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_75556298_75562696_75562888_75562962
ENSMUSG00000099370.2_75555289_75563059_2	chr3	-	1278	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-21	-142	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	102.5	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGGTGGTCTCCATTCT	NA	False	NA	-4	True	AATAAA	-15	NA	75563059	75555288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_75556298_75562696_75562869_75562962
ENSMUSG00000099370.2_75555677_75563038_1	chr3	-	963	2	ISM	ENSMUSG00000099370.2	ENSMUST00000190602.2	1026	3	0	924	0	-530	5prime_fragment	FALSE	canonical	3	230	junction_1	0	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGGGGCTATTAGACATT	NA	False	NA	NA	False	ATTAAA	-2	NA	75563038	75555676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_75556298_75562696
ENSMUSG00000099370.2_75555677_75563059_2	chr3	-	909	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-21	-530	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	109.5	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGGGGCTATTAGACATT	NA	False	NA	NA	False	ATTAAA	-2	NA	75563059	75555676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_75556298_75562696_75562888_75562962
ENSMUSG00000099370.2_75555677_75563059_3	chr3	-	890	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-21	-530	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	102.5	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGGGGCTATTAGACATT	NA	False	NA	NA	False	ATTAAA	-2	NA	75563059	75555676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_75556298_75562696_75562869_75562962
ENSMUSG00000099474.2_30841415_30846342_1	chr17	-	841	2	NIC	ENSMUSG00000099474.2	novel	845	4	NA	NA	-463	0	combination_of_known_splicesites	FALSE	canonical	3	432	junction_1	0	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTTTCCTCTGAGATG	NA	False	NA	-1	True	AATAAA	-25	NA	30846342	30841414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_30841669_30845755
ENSMUSG00000099481.7_101714718_101719210_1	chr7	+	401	2	ISM	ENSMUSG00000099481.7	ENSMUST00000153176.8	2456	8	-9	10292	0	0	5prime_fragment	FALSE	canonical	3	50	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTGTACTGTTACTGC	NA	False	NA	NA	False	NA	NA	NA	101714717	101719210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_101715012_101719103
ENSMUSG00000099498.2_13144948_13164731_1	chr1	+	488	3	NNC	ENSMUSG00000099498.2	novel	288	4	NA	NA	5886	15845	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCCTCCATTTTTTACA	NA	False	NA	NA	False	AATAAA	-41	NA	13144947	13164731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_13145004_13148829_13148887_13164356
ENSMUSG00000099590.2_140414931_140417879_1	chr7	-	798	4	NIC	ENSMUSG00000099590.2	novel	1077	4	NA	NA	7723	2203	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	861	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTTTGGGCCTCAG	NA	False	NA	NA	False	NA	NA	NA	140417879	140414930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_140415172_140415524_140415665_140416659_140416796_140417598
ENSMUSG00000099590.2_140415054_140417879_1	chr7	-	675	4	NIC	ENSMUSG00000099590.2	novel	1077	4	NA	NA	7723	2080	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	824	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGCTCTCTAGTCAGCC	NA	False	NA	NA	False	NA	NA	NA	140417879	140415053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_140415172_140415524_140415665_140416659_140416796_140417598
ENSMUSG00000099708.2_83679027_83728687_1	chr12	-	3015	19	Genic_Genomic	ENSMUSG00000099708.2	novel	2000	1	NA	NA	-48080	-419	multi-exon	FALSE	non_canonical	0	0	junction_1	0	401	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGGGCTTCCTCTTGCCC	2773	False	NA	NA	False	AAAACA	-25	NA	83728687	83679026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr12_-_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ENSMUSG00000099708.2_83679027_83728687_2	chr12	-	3079	20	Genic_Genomic	ENSMUSG00000099708.2	novel	2000	1	NA	NA	-48080	-419	multi-exon	FALSE	non_canonical	0	0	junction_1	0	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGGGCTTCCTCTTGCCC	2773	False	NA	NA	False	AAAACA	-25	NA	83728687	83679026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr12_-_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ENSMUSG00000099708.2_83679027_83728922_2	chr12	-	3250	19	Genic_Genomic	ENSMUSG00000099708.2	novel	2000	1	NA	NA	-48315	-419	multi-exon	FALSE	non_canonical	0	0	junction_1	0	456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGGGCTTCCTCTTGCCC	2538	False	NA	NA	False	AAAACA	-25	NA	83728922	83679026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr12_-_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ENSMUSG00000099708.2_83679027_83729901_1	chr12	-	4229	19	Genic_Genomic	ENSMUSG00000099708.2	novel	2000	1	NA	NA	-49294	-419	multi-exon	FALSE	non_canonical	0	0	junction_1	0	834	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGGGCTTCCTCTTGCCC	1559	False	NA	NA	False	AAAACA	-25	NA	83729901	83679026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr12_-_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ENSMUSG00000099847.2_37635792_37637226_1	chr13	-	792	2	FSM	ENSMUSG00000099847.2	ENSMUST00000187093.2	354	2	-42	-396	-42	396	multi-exon	FALSE	canonical	3	19	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCTCAGTAAGTTGGCT	NA	False	NA	NA	False	ATTAAA	-36	NA	37637226	37635791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_37636445_37637087
ENSMUSG00000099847.2_37635955_37637226_1	chr13	-	629	2	FSM	ENSMUSG00000099847.2	ENSMUST00000187093.2	354	2	-42	-233	-42	233	multi-exon	FALSE	canonical	3	19	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTCTACCCTCCTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	37637226	37635954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_37636445_37637087
ENSMUSG00000099913.2_53336270_53365326_1	chr1	-	1864	10	NIC	ENSMUSG00000099913.2	novel	3142	7	NA	NA	26500	28396	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACCGCTTCCGGAAGG	NA	False	NA	NA	False	NA	NA	NA	53365326	53336269	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_53336348_53338130_53338312_53344613_53344766_53354018_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ENSMUSG00000099913.2_53352813_53365326_1	chr1	-	1202	6	NIC	ENSMUSG00000099913.2	novel	3142	7	NA	NA	26500	11853	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACTACGCAGGCGCCCGG	NA	False	NA	NA	False	NA	NA	NA	53365326	53352812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_53353018_53354014_53354259_53359101_53359456_53360238_53360370_53362325_53362430_53365162
ENSMUSG00000100081.2_115696418_115736447_1	chr4	-	2520	13	Genic_Genomic	ENSMUSG00000100081.2	novel	260	1	NA	NA	-674	39096	multi-exon	FALSE	non_canonical	0	0	junction_1	0	457	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGGAAGAGGCGGAGCTAAA	NA	False	NA	NA	False	NA	NA	NA	115736447	115696417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr4_-_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ENSMUSG00000100084.3_99870717_99899731_1	chr15	-	1501	12	Genic_Genomic	ENSMUSG00000100084.3	novel	1130	1	NA	NA	-28563	-678	multi-exon	FALSE	non_canonical	0	0	junction_1	0	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTCAGCCGCTGCGCCCT	5640	False	NA	NA	False	NA	NA	NA	99899731	99870716	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_-_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682
ENSMUSG00000100153.3_119340089_119341458_1	chr7	+	506	2	FSM	ENSMUSG00000100153.3	ENSMUST00000207161.2	1437	2	940	-9	738	9	multi-exon	FALSE	canonical	3	469	junction_1	0	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAACGTGGAGCTTG	NA	False	NA	NA	False	NA	NA	NA	119340088	119341458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_119340294_119341157
ENSMUSG00000100215.2_55374560_55375090_1	chr1	+	151	2	Genic_Genomic	ENSMUSG00000100215.2	novel	396	1	NA	NA	0	135	multi-exon	FALSE	non_canonical	0	0	junction_1	0	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAAGTCATGCCTGATA	NA	False	NA	NA	False	NA	NA	NA	55374559	55375090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_55374563_55374942
ENSMUSG00000100280.3_34508061_34508702_1	chr1	-	191	2	Genic_Genomic	ENSMUSG00000100280.3	novel	1601	1	NA	NA	813	-146	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCATTCTTATTATGGG	NA	False	NA	NA	False	NA	NA	NA	34508702	34508060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_-_34508194_34508644
ENSMUSG00000100572.2_69582710_69584203_1	chr17	-	411	3	FSM	ENSMUSG00000100572.2	ENSMUST00000187090.2	764	3	0	353	0	-353	multi-exon	FALSE	canonical	3	43	junction_1	7	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGGGAGTTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	69584203	69582709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_69582902_69583120_69583191_69584054
ENSMUSG00000100599.3_99140698_99149801_2	chr15	+	1863	14	Fusion	ENSMUSG00000037579.8_ENSMUSG00000100599.3	novel	3698	15	NA	NA	4547	-1345	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCGGCTTCCGTGAGAC	NA	False	NA	NA	False	NA	NA	NA	99140697	99149801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr15_+_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142511_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
ENSMUSG00000100599.3_99140698_99149801_3	chr15	+	2015	15	Fusion	ENSMUSG00000037579.8_ENSMUSG00000100599.3	novel	3698	15	NA	NA	4547	-1345	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCGGCTTCCGTGAGAC	NA	False	NA	NA	False	NA	NA	NA	99140697	99149801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr15_+_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149602
ENSMUSG00000100755.2_37768889_37769377_1	chr3	+	331	2	Genic_Genomic	ENSMUSG00000100755.2	novel	425	1	NA	NA	0	64	multi-exon	FALSE	canonical	0	0	junction_1	0	5500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGTGGAATAGGATTG	7664	False	NA	NA	False	AATAAA	-30	NA	37768888	37769377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_37768897_37769054
ENSMUSG00000100927.2_93549624_93563389_1	chr1	+	2043	12	Fusion	ENSMUSG00000100927.2_ENSMUSG00000034066.14	novel	3937	27	NA	NA	-13291	-842	multi-exon	FALSE	non_canonical	0	0	junction_1	0	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGGCGTCGTGGCGAG	NA	False	NA	NA	False	NA	NA	NA	93549623	93563389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr1_+_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ENSMUSG00000100954.5_151220269_151239137_1	chr1	-	2434	15	Genic_Genomic	ENSMUSG00000100954.6	novel	2498	1	NA	NA	-18155	-1784	multi-exon	FALSE	non_canonical	0	0	junction_1	0	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCACTCCCTCGCACGTC	NA	False	NA	NA	False	NA	NA	NA	151239137	151220268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_-_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUSG00000100985.2_30829552_30855321_1	chr7	+	2867	20	NIC	ENSMUSG00000100985.2	novel	496	3	NA	NA	-25541	-7654	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTTTCTCCCTGCGT	NA	False	NA	NA	False	NA	NA	NA	30829551	30855321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30854291_30854572_30855260
ENSMUSG00000101009.7_76915485_76924548_1	chr14	+	610	2	NIC	ENSMUSG00000101009.7	novel	857	5	NA	NA	391	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTTCACGAGTGTGT	NA	False	NA	NA	False	AATAAA	-31	NA	76915484	76924548	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_76915820_76924273
ENSMUSG00000101144.3_82992001_83028619_1	chr9	+	823	6	Genic_Genomic	ENSMUSG00000101144.3_ENSMUSG00000102882.2	novel	1185	2	NA	NA	-4160	-715	multi-exon	FALSE	non_canonical	0	0	junction_1	0	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGCACCTCCGCTTCCT	6090	False	NA	NA	False	NA	NA	NA	82992000	83028619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_82992483_82993086_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
ENSMUSG00000101162.3_125437229_125471754_1	chr6	+	1113	8	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	807	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437690_125438188_125438273_125439076_125439107_125439344_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_10	chr6	+	1124	9	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	548	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437438_125437541_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_11	chr6	+	1194	9	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1595	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437447_125437480_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_12	chr6	+	1003	8	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	339	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437465_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_13	chr6	+	1222	8	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	12618	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437690_125438188_125438273_125439076_125439167_125439289_125439379_125440643_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_15	chr6	+	1015	6	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	694	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437690_125438188_125438249_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_16	chr6	+	1162	8	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	656	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437624_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_17	chr6	+	1212	8	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4503	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449459_125471536
ENSMUSG00000101162.3_125437229_125471754_18	chr6	+	1171	9	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437586_125437642_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_19	chr6	+	1125	7	NIC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125471536
ENSMUSG00000101162.3_125437229_125471754_2	chr6	+	1111	7	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	734	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437690_125438188_125438260_125439303_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_20	chr6	+	1213	8	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4622	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437690_125438188_125438273_125439076_125439148_125439285_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_21	chr6	+	955	5	NIC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	570	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_125437690_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_22	chr6	+	1138	7	NIC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_125437690_125438188_125438273_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_23	chr6	+	1205	8	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1545	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437690_125438211_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_3	chr6	+	1222	8	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	19718	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437690_125438188_125438273_125439082_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_4	chr6	+	1006	9	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437387_125437608_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_5	chr6	+	1234	8	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	18824	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440641_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_6	chr6	+	959	5	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	560	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437690_125440643_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_7	chr6	+	1214	8	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	8968	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437690_125438188_125438273_125439090_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_8	chr6	+	900	4	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	517	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437690_125441332_125441451_125449371_125449475_125471536
ENSMUSG00000101162.3_125437229_125471754_9	chr6	+	1207	8	NNC	ENSMUSG00000101162.3	novel	595	4	NA	NA	-34158	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2447	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGGAGGGATGCCG	2899	False	NA	NA	False	AAAAAG	-36	NA	125437228	125471754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_125437690_125438188_125438273_125439076_125439167_125439289_125439368_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000101438.3_34138548_34148265_1	chr17	-	2655	8	NIC	ENSMUSG00000101438.3	novel	569	2	NA	NA	-8806	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	324	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGTTGGAGGAACGCCGCC	NA	False	NA	NA	False	NA	NA	NA	34148265	34138547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113
ENSMUSG00000101503.2_74319005_74323839_1	chr1	+	1748	11	NNC	ENSMUSG00000101503.2	novel	334	2	NA	NA	-1315	2814	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	4118	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCGACGACGCGGAACTCG	NA	False	NA	NA	False	NA	NA	NA	74319004	74323839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320974_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ENSMUSG00000101503.2_74319005_74323865_2	chr1	+	1773	11	NNC	ENSMUSG00000101503.2	novel	334	2	NA	NA	-1315	2840	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCCGGGAGGAAGTAGG	NA	False	NA	NA	False	NA	NA	NA	74319004	74323865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322258_74322373_74323044_74323201_74323661
ENSMUSG00000101549.2_132196005_132206195_1	chr1	-	737	4	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1954	6449	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_1	10.077477638554	999	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCCACTGTAGAACAGGC	NA	False	NA	NA	False	AATAAA	-14	NA	132206195	132196004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_132196405_132202453_132202560_132202761_132202875_132206077
ENSMUSG00000101549.2_132196244_132206195_1	chr1	-	498	4	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1954	6210	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_1	10.077477638554	863	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCCTTCTTAATTTCGAG	NA	False	NA	2	True	AATAAA	-20	NA	132206195	132196243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_-_132196405_132202453_132202560_132202761_132202875_132206077
ENSMUSG00000101555.2_69896748_69914715_1	chr9	-	1544	10	Genic_Genomic	ENSMUSG00000101555.2	novel	1569	1	NA	NA	-17465	-1066	multi-exon	FALSE	non_canonical	0	0	junction_1	0	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCCGGGCGCGGCCGAGG	NA	False	NA	NA	False	NA	NA	NA	69914715	69896747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_-_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
ENSMUSG00000101555.2_69896748_69915539_1	chr9	-	2368	10	Genic_Genomic	ENSMUSG00000101555.2	novel	1569	1	NA	NA	-18289	-1066	multi-exon	FALSE	non_canonical	0	0	junction_1	0	550	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCCGGGCGCGGCCGAGG	NA	False	NA	NA	False	NA	NA	NA	69915539	69896747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_-_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
ENSMUSG00000101711.2_34478932_34484040_2	chr1	-	1295	9	Genic_Genomic	ENSMUSG00000101711.2	novel	529	2	NA	NA	-229	-340	multi-exon	FALSE	non_canonical	0	0	junction_1	0	358	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAAAGGCCTTTAGAG	1917	False	NA	NA	False	NA	NA	NA	34484040	34478931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_-_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483326_34483557
ENSMUSG00000101878.2_116150592_116151475_2	chr6	+	630	2	Genic_Genomic	ENSMUSG00000101878.2	novel	387	1	NA	NA	-106	391	multi-exon	FALSE	canonical	3	43	junction_1	0	719	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACCAAAACACCAAATGCA	NA	False	NA	NA	False	AATAAA	-32	NA	116150591	116151475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_116150708_116150961
ENSMUSG00000101878.2_116150592_116151475_3	chr6	+	746	2	Genic_Genomic	ENSMUSG00000101878.2	novel	387	1	NA	NA	-106	391	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1557	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACCAAAACACCAAATGCA	NA	False	NA	NA	False	AATAAA	-32	NA	116150591	116151475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_116150714_116150851
ENSMUSG00000101878.2_116150592_116151475_4	chr6	+	704	2	Genic_Genomic	ENSMUSG00000101878.2	novel	387	1	NA	NA	-106	391	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1017	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACCAAAACACCAAATGCA	NA	False	NA	NA	False	AATAAA	-32	NA	116150591	116151475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_116150729_116150908
ENSMUSG00000101892.2_57885666_57897711_1	chr15	-	1418	6	NNC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_4	316.693795329179	5119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTCCCAGGTAATTTCA	NA	False	NA	-20	True	AATAAA	-29	NA	57897711	57885665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895291_57895476_57897479
ENSMUSG00000101892.2_57885666_57897711_2	chr15	-	1335	6	NNC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	296.54719691813	5090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTCCCAGGTAATTTCA	NA	False	NA	-20	True	AATAAA	-29	NA	57897711	57885665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_57885960_57888664_57888803_57892009_57892441_57894352_57894497_57895379_57895476_57897479
ENSMUSG00000101952.2_93633113_93682372_1	chr1	+	1972	6	Genic_Genomic	ENSMUSG00000101952.2	novel	982	3	NA	NA	-25713	3578	multi-exon	FALSE	non_canonical	0	0	junction_1	0	393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCAAGATGGCTGCGCGC	NA	False	NA	NA	False	NA	NA	NA	93633112	93682372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_93633378_93642619_93642724_93644353_93644464_93652878_93653039_93677568_93678708_93682178
ENSMUSG00000101970.9_73193784_73207603_1	chr7	-	629	5	FSM	ENSMUSG00000101970.9	ENSMUST00000187421.7	519	5	118	-228	118	0	multi-exon	FALSE	canonical	3	58	junction_4	79.8780320238299	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCAGTTTGGGCCTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	73207603	73193783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_73194131_73199344_73199401_73205002_73205082_73205602_73205669_73207522
ENSMUSG00000102047.2_75421726_75428422_1	chr18	-	588	2	NNC	ENSMUSG00000102047.2	novel	650	2	NA	NA	1966	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAACCTGCTGTCTC	NA	False	NA	NA	False	AATAAA	-32	NA	75428422	75421725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_75422241_75428349
ENSMUSG00000102114.3_41594837_41685626_1	chr10	+	2272	12	Genic_Genomic	ENSMUSG00000102114.3	novel	3561	4	NA	NA	-27880	26193	multi-exon	FALSE	non_canonical	0	0	junction_1	0	565	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTCGCGGTGGCATCTG	NA	False	NA	NA	False	NA	NA	NA	41594836	41685626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr10_+_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41657479_41657547_41685568
ENSMUSG00000102135.2_6986783_6993866_1	chr1	+	683	2	NNC	ENSMUSG00000102135.2	novel	626	2	NA	NA	0	54	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	4858	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGTGACAGCAGATACT	NA	False	NA	NA	False	AATAAA	-33	NA	6986782	6993866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_6987235_6993635
ENSMUSG00000102252.6_59632862_59654859_1	chr7	-	1306	10	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	0	-612	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	645.515546666116	6491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTTTTTCTTTGTCTG	NA	False	NA	-9	True	AATAAA	-18	NA	59654859	59632861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636625_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
ENSMUSG00000102252.6_59632862_59654859_2	chr7	-	1313	10	FSM	ENSMUSG00000102252.6	ENSMUST00000059305.17	1932	10	0	619	0	-612	multi-exon	FALSE	canonical	3	1774	junction_5	121.666210044805	6502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTTTTTCTTTGTCTG	NA	False	NA	-9	True	AATAAA	-18	NA	59654859	59632861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
ENSMUSG00000102299.2_155653905_155688635_1	chr1	+	2481	13	Genic_Genomic	ENSMUSG00000102299.2	novel	235	1	NA	NA	-10965	23531	multi-exon	FALSE	non_canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGAGCTAAGAGGCT	NA	False	NA	NA	False	NA	NA	NA	155653904	155688635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_155654598_155655463_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
ENSMUSG00000102428.2_37901427_37974926_1	chr18	+	2286	4	FSM	ENSMUSG00000102428.2	ENSMUST00000044851.8	5080	4	2794	0	2601	0	multi-exon	FALSE	canonical	3	109	junction_1	53.597263611743	575	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	NA	False	NA	17	True	AATAAA	-20	NA	37901426	37974926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_37901594_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000102457.2_16634562_16689513_1	chr1	+	671	6	Genic_Genomic	ENSMUSG00000102457.2	novel	2980	1	NA	NA	-54222	-2250	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGGGGCGGAGCCGCCGT	NA	False	NA	NA	False	NA	NA	NA	16634561	16689513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_16634753_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ENSMUSG00000102595.2_82915168_82922356_2	chr3	-	1558	10	Genic_Genomic	ENSMUSG00000102595.2	novel	447	4	NA	NA	-6561	-81094	multi-exon	TRUE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTCTTGGGCTTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	82922356	82915167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_-_82915290_82915459_82915505_82915680_82915865_82915954_82916049_82917370_82917502_82917762_82917897_82918651_82918837_82920070_82920349_82921444_82921615_82922141
ENSMUSG00000102840.2_191553622_191565162_1	chr1	-	3140	8	Genic_Genomic	ENSMUSG00000102840.2	novel	1624	1	NA	NA	-11057	-1140	multi-exon	FALSE	non_canonical	0	0	junction_1	0	967	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCGGGCTTCGGCCTCGC	746	False	NA	NA	False	NA	NA	NA	191565162	191553621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_-_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563269
ENSMUSG00000102918.2_37939417_37974926_1	chr18	+	2333	4	NNC	ENSMUSG00000102918.2	novel	4687	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	99.533355659743	509	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	NA	False	NA	17	True	AATAAA	-20	NA	37939416	37974926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_37939631_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000102976.7_133549153_133589112_1	chr1	-	2899	18	FSM	ENSMUSG00000102976.7	ENSMUST00000191896.6	4396	18	-56	1553	4	-1553	multi-exon	FALSE	canonical	3	129	junction_16	96.2094744595279	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATACCTCTGAAGTA	NA	False	NA	-91	True	NA	NA	NA	133589112	133549152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588974
ENSMUSG00000102976.7_133549153_133589112_2	chr1	-	2826	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	6	-1544	combination_of_known_splicesites	FALSE	canonical	3	25	junction_16	101.178060863015	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATACCTCTGAAGTA	NA	False	NA	-91	True	NA	NA	NA	133589112	133549152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588993
ENSMUSG00000102976.7_133549153_133589112_3	chr1	-	2880	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	4	-1553	combination_of_known_junctions	FALSE	canonical	3	78	junction_17	104.361959952471	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATACCTCTGAAGTA	NA	False	NA	-91	True	NA	NA	NA	133589112	133549152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588993
ENSMUSG00000102976.7_133549459_133589112_1	chr1	-	2520	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	6	-1850	combination_of_known_splicesites	FALSE	canonical	3	25	junction_16	101.178060863015	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCGCGCCGGCTGAGCT	NA	False	NA	NA	False	NA	NA	NA	133589112	133549458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588993
ENSMUSG00000102976.7_133549459_133589112_2	chr1	-	2593	18	FSM	ENSMUSG00000102976.7	ENSMUST00000191896.6	4396	18	-56	1859	4	-1859	multi-exon	FALSE	canonical	3	129	junction_16	96.2094744595279	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCGCGCCGGCTGAGCT	NA	False	NA	NA	False	NA	NA	NA	133589112	133549458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588974
ENSMUSG00000102976.7_133549459_133589112_3	chr1	-	2574	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	4	-1859	combination_of_known_junctions	FALSE	canonical	3	78	junction_17	104.361959952471	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCGCGCCGGCTGAGCT	NA	False	NA	NA	False	NA	NA	NA	133589112	133549458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588993
ENSMUSG00000103072.2_33784565_33796808_1	chr1	+	1792	3	Genic_Genomic	ENSMUSG00000103072.2	novel	341	1	NA	NA	-2523	9380	multi-exon	FALSE	non_canonical	0	0	junction_1	0	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCGAGCCGCACGTCGCC	NA	False	NA	NA	False	NA	NA	NA	33784564	33796808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_33786098_33787297_33787408_33796659
ENSMUSG00000103156.2_180590129_180596221_1	chr1	-	1533	2	FSM	ENSMUSG00000103156.2	ENSMUST00000193209.2	600	2	0	-933	0	933	multi-exon	FALSE	canonical	1	1	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGTTATAGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	180596221	180590128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_180591486_180596045
ENSMUSG00000103341.2_86135388_86159443_2	chr8	+	1568	4	Genic_Genomic	ENSMUSG00000103341.2	novel	630	1	NA	NA	-23927	-501	multi-exon	FALSE	non_canonical	0	0	junction_1	0	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCGCGTGCGCGTGCGCGG	NA	False	NA	NA	False	NA	NA	NA	86135387	86159443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_86136520_86138741_86138925_86153488_86153586_86159287
ENSMUSG00000103341.2_86136447_86159443_1	chr8	+	509	4	Genic_Genomic	ENSMUSG00000103341.2	novel	630	1	NA	NA	-22868	-501	multi-exon	FALSE	non_canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCGCGTGCGCGTGCGCGG	NA	False	NA	NA	False	NA	NA	NA	86136446	86159443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_86136520_86138741_86138925_86153488_86153586_86159287
ENSMUSG00000103380.2_171910372_171949897_1	chr1	-	4346	33	Genic_Genomic	ENSMUSG00000103380.2	novel	942	2	NA	NA	-29651	7105	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1451	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGGACAAGGACTTCCG	NA	False	NA	NA	False	NA	NA	NA	171949897	171910371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_-_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944497_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ENSMUSG00000103380.2_171910372_171949897_2	chr1	-	4351	33	Genic_Genomic	ENSMUSG00000103380.2	novel	942	2	NA	NA	-29651	7105	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGGACAAGGACTTCCG	NA	False	NA	NA	False	NA	NA	NA	171949897	171910371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_-_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ENSMUSG00000103409.3_107464925_107470237_1	chr9	-	2075	11	NIC	ENSMUSG00000103409.3	novel	1424	4	NA	NA	1387	4904	intron_retention	FALSE	non_canonical	0	0	junction_1	0	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTCAAATGGGTCGCT	NA	False	NA	NA	False	NA	NA	NA	107470237	107464924	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474
ENSMUSG00000103409.3_107464925_107470237_2	chr9	-	1972	12	NIC	ENSMUSG00000103409.3	novel	1424	4	NA	NA	1387	4904	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1706	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTCAAATGGGTCGCT	NA	False	NA	NA	False	NA	NA	NA	107470237	107464924	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ENSMUSG00000103481.2_3726903_3759011_1	chr16	-	1565	12	Genic_Genomic	ENSMUSG00000103481.2_ENSMUSG00000085048.2	novel	485	3	NA	NA	-11790	-182	multi-exon	FALSE	non_canonical	0	0	junction_1	0	747	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCTTGGACAGCGTGC	NA	False	NA	NA	False	NA	NA	NA	3759011	3726902	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_-_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
ENSMUSG00000103638.2_99125495_99146983_1	chr9	-	1789	6	Genic_Genomic	ENSMUSG00000103638.2	novel	1755	1	NA	NA	-21325	-1591	multi-exon	FALSE	non_canonical	0	0	junction_1	0	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCCTACGCGACCGTTAG	NA	False	NA	NA	False	NA	NA	NA	99146983	99125494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_-_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681
ENSMUSG00000103638.2_99125495_99182457_1	chr9	-	2650	18	Fusion	ENSMUSG00000100281.2_ENSMUSG00000103638.2	novel	948	2	NA	NA	4271	-1591	multi-exon	FALSE	non_canonical	0	0	junction_1	0	527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCCTACGCGACCGTTAG	NA	False	NA	NA	False	NA	NA	NA	99182457	99125494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr9_-_99125544_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ENSMUSG00000103672.2_100994701_100995992_1	chr9	+	191	2	Genic_Genomic	ENSMUSG00000103672.2	novel	5531	1	NA	NA	801	-3438	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2041	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGCTTTTTAAGGAGT	NA	False	NA	NA	False	NA	NA	NA	100994700	100995992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_100994872_100995972
ENSMUSG00000103672.2_100994701_100995992_2	chr9	+	192	2	Genic_Genomic	ENSMUSG00000103672.2	novel	5531	1	NA	NA	801	-3438	multi-exon	TRUE	canonical	0	0	junction_1	0	2458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGCTTTTTAAGGAGT	NA	False	NA	NA	False	NA	NA	NA	100994700	100995992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_100994859_100995958
ENSMUSG00000103715.2_85569413_85631367_1	chr9	+	5630	29	Genic_Genomic	ENSMUSG00000103715.2	novel	1352	1	NA	NA	-61718	-1115	multi-exon	FALSE	non_canonical	0	0	junction_1	0	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAACCTGAGCTAGAGC	NA	False	NA	NA	False	NA	NA	NA	85569412	85631367	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ENSMUSG00000103715.2_85569595_85631367_1	chr9	+	5448	29	Genic_Genomic	ENSMUSG00000103715.2	novel	1352	1	NA	NA	-61536	-1115	multi-exon	FALSE	non_canonical	0	0	junction_1	0	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAACCTGAGCTAGAGC	NA	False	NA	NA	False	NA	NA	NA	85569594	85631367	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_+_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ENSMUSG00000103730.2_51181980_51189469_1	chr14	-	1321	6	NIC	ENSMUSG00000103730.2	novel	469	2	NA	NA	-8	6036	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	596	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGGTCAAGACTGTTAGT	9474	False	NA	NA	False	NA	NA	NA	51189469	51181979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_-_51182051_51185308_51185479_51187714_51187819_51187999_51188176_51188288_51188480_51188860
ENSMUSG00000103766.6_88186748_88204213_1	chr3	-	434	4	Fusion	ENSMUSG00000103766.6_ENSMUSG00000010538.15	novel	600	2	NA	NA	-10	3316	multi-exon	FALSE	canonical	2	4	junction_2	67.3250820026732	90	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCACCTCTGCCTGG	NA	False	NA	NA	False	NA	NA	NA	88204213	88186747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr3_-_88186818_88187238_88187460_88202697_88202758_88204130
ENSMUSG00000104208.2_108183638_108215133_1	chr9	-	1887	6	NIC	ENSMUSG00000104208.2	novel	347	2	NA	NA	339	30650	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	13374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGACGGAGGACCGCGGGC	NA	False	NA	NA	False	NA	NA	NA	108215133	108183637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
ENSMUSG00000104444.2_28859659_28861571_1	chr3	-	509	4	NNC	ENSMUSG00000104444.2	novel	274	2	NA	NA	6563	1695	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	10428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGGCTTGCGCCGCACGCA	NA	False	NA	NA	False	NA	NA	NA	28861571	28859658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_28859693_28860651_28860742_28860858_28861008_28861335
ENSMUSG00000104444.2_28859659_28861571_2	chr3	-	587	4	NIC	ENSMUSG00000104444.2	novel	274	2	NA	NA	6563	1695	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	4660	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGGCTTGCGCCGCACGCA	NA	False	NA	NA	False	NA	NA	NA	28861571	28859658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_28859731_28860651_28860742_28860818_28861008_28861335
ENSMUSG00000104444.2_28859659_28861571_3	chr3	-	523	4	NIC	ENSMUSG00000104444.2	novel	274	2	NA	NA	6563	1695	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	17028	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGGCTTGCGCCGCACGCA	NA	False	NA	NA	False	NA	NA	NA	28861571	28859658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_28859731_28860648_28860742_28860885_28861008_28861335
ENSMUSG00000104444.2_28859659_28861571_4	chr3	-	473	4	NNC	ENSMUSG00000104444.2	novel	274	2	NA	NA	6563	1695	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	7321	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGGCTTGCGCCGCACGCA	NA	False	NA	NA	False	NA	NA	NA	28861571	28859658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_28859693_28860648_28860742_28860885_28860996_28861335
ENSMUSG00000104444.2_28859659_28861571_5	chr3	-	476	4	NNC	ENSMUSG00000104444.2	novel	274	2	NA	NA	6563	1695	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	13198	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGGCTTGCGCCGCACGCA	NA	False	NA	NA	False	NA	NA	NA	28861571	28859658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_28859693_28860651_28860742_28860891_28861008_28861335
ENSMUSG00000104444.2_28859659_28861571_6	chr3	-	464	4	NNC	ENSMUSG00000104444.2	novel	274	2	NA	NA	6563	1695	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3424	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGGCTTGCGCCGCACGCA	NA	False	NA	NA	False	NA	NA	NA	28861571	28859658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_28859693_28860651_28860742_28860903_28861008_28861335
ENSMUSG00000104444.2_28859659_28878961_1	chr3	-	527	5	NNC	ENSMUSG00000104444.2	novel	274	2	NA	NA	-10827	1695	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	46563	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGGCTTGCGCCGCACGCA	NA	False	NA	NA	False	NA	NA	NA	28878961	28859658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_28859693_28860648_28860742_28860885_28861008_28861335_28861575_28878922
ENSMUSG00000104444.2_28859659_28878961_2	chr3	-	502	5	NNC	ENSMUSG00000104444.2	novel	274	2	NA	NA	-10827	1695	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	46678	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGGCTTGCGCCGCACGCA	NA	False	NA	NA	False	NA	NA	NA	28878961	28859658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_28859693_28860648_28860742_28860885_28861008_28861335_28861575_28878947
ENSMUSG00000104445.2_88150431_88155179_1	chr3	-	1294	8	ISM	ENSMUSG00000104445.2	ENSMUST00000171887.4	1937	10	6837	250	6837	-250	3prime_fragment	TRUE	canonical	2	4	junction_4	1.39970842444753	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCGCCTCTCCC	6135	False	NA	NA	False	GATAAA	-24	NA	88155179	88150430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_-_88150756_88150899_88150974_88151831_88151954_88152439_88152574_88152742_88152881_88153121_88153289_88154738_88154887_88154993
ENSMUSG00000104453.2_81173298_81181250_1	chr7	-	856	5	Genic_Genomic	ENSMUSG00000104453.2	novel	2213	1	NA	NA	1019	6759	multi-exon	FALSE	non_canonical	0	0	junction_1	0	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTTCCGGCTTCTTAGC	NA	False	NA	NA	False	NA	NA	NA	81181250	81173297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_81173425_81178534_81178689_81178904_81179007_81179094_81179276_81180958
ENSMUSG00000104529.5_143150534_143151512_1	chr5	-	605	3	NNC	ENSMUSG00000104529.5	novel	520	3	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	8	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTCGCCTCCTATTC	3471	False	NA	0	True	AATAAA	-19	NA	143151512	143150533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_143150848_143151105_143151305_143151420
ENSMUSG00000104535.2_8783288_8797933_1	chr5	-	1740	6	Genic_Genomic	ENSMUSG00000104535.2	novel	4108	1	NA	NA	-12165	-1627	multi-exon	TRUE	non_canonical	0	0	junction_1	0	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGTAGGACACCTCCC	NA	False	NA	NA	False	NA	NA	NA	8797933	8783287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ENSMUSG00000104535.2_8783288_8798570_1	chr5	-	2377	6	Genic_Genomic	ENSMUSG00000104535.2	novel	4108	1	NA	NA	-12802	-1627	multi-exon	FALSE	non_canonical	0	0	junction_1	0	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGTAGGACACCTCCC	NA	False	NA	NA	False	NA	NA	NA	8798570	8783287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ENSMUSG00000104548.2_152052152_152098975_1	chr3	-	3854	24	Genic_Genomic	ENSMUSG00000105710.2_ENSMUSG00000104548.2_ENSMUSG00000104822.2	novel	2312	1	NA	NA	902	34342	multi-exon	FALSE	non_canonical	0	0	junction_1	0	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTTCCGGTGTCTCCG	9779	False	NA	NA	False	NA	NA	NA	152098975	152052151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_-_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ENSMUSG00000104548.2_152052152_152098975_2	chr3	-	3878	24	Genic_Genomic	ENSMUSG00000105710.2_ENSMUSG00000104548.2_ENSMUSG00000104822.2	novel	2312	1	NA	NA	902	34342	multi-exon	FALSE	non_canonical	0	0	junction_1	0	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTTCCGGTGTCTCCG	9779	False	NA	NA	False	NA	NA	NA	152098975	152052151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_-_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ENSMUSG00000104559.2_111478629_111536225_5	chr5	-	2734	11	Genic_Genomic	ENSMUSG00000104559.2	novel	775	1	NA	NA	-70	56752	multi-exon	FALSE	non_canonical	0	0	junction_1	0	384	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACACGCAAGCGTAGCCC	NA	False	NA	NA	False	NA	NA	NA	111536225	111478628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_111478700_111483360_111483392_111486179_111486299_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ENSMUSG00000104574.2_122213642_122323840_1	chr3	-	3096	12	NIC	ENSMUSG00000104574.2	novel	728	2	NA	NA	-71131	6450	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCGGCAGCGCGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	122323840	122213641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_122213833_122220093_122220404_122248701_122248742_122298575_122298705_122301774_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
ENSMUSG00000104686.2_138602878_138618000_2	chr5	+	3762	6	Genic_Genomic	ENSMUSG00002075951.1_ENSMUSG00000104686.2	novel	83	1	NA	NA	-2083	-1019	multi-exon	FALSE	non_canonical	0	0	junction_1	0	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGACCGGTGACAGCCAAA	NA	False	NA	NA	False	NA	NA	NA	138602877	138618000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_138606084_138610085_138610176_138610300_138610428_138614731_138614828_138615316_138615430_138617870
ENSMUSG00000104686.2_138604382_138618000_1	chr5	+	2162	5	Genic_Genomic	ENSMUSG00002075951.1_ENSMUSG00000104686.2	novel	83	1	NA	NA	-579	-1019	multi-exon	FALSE	non_canonical	0	0	junction_1	0	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGACCGGTGACAGCCAAA	NA	False	NA	NA	False	NA	NA	NA	138604381	138618000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_138606084_138610085_138610176_138610300_138610428_138615316_138615430_138617870
ENSMUSG00000104686.2_138604382_138618000_2	chr5	+	2258	6	Genic_Genomic	ENSMUSG00002075951.1_ENSMUSG00000104686.2	novel	83	1	NA	NA	-579	-1019	multi-exon	FALSE	non_canonical	0	0	junction_1	0	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGACCGGTGACAGCCAAA	NA	False	NA	NA	False	NA	NA	NA	138604381	138618000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_138606084_138610085_138610176_138610300_138610428_138614731_138614828_138615316_138615430_138617870
ENSMUSG00000104950.2_3646371_3686967_1	chr5	-	3985	24	Fusion	ENSMUSG00000007415.16_ENSMUSG00000040302.18	novel	2368	5	NA	NA	4572	-4114	multi-exon	FALSE	non_canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCGGAGAGCGGAGTCCA	NA	False	NA	NA	False	NA	NA	NA	3686967	3646370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr5_-_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ENSMUSG00000104960.2_123301204_123301799_1	chr3	-	191	3	FSM	ENSMUSG00000104960.2	ENSMUST00000196466.2	448	3	254	3	180	0	multi-exon	FALSE	canonical	3	427	junction_1	15.5	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGACTGTGTCCTGTTTCT	NA	False	NA	45	True	AATAAA	-18	NA	123301799	123301203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_123301310_123301465_123301512_123301760
ENSMUSG00000104985.2_121509795_121523643_1	chr5	+	2444	12	NIC	ENSMUSG00000104985.2	novel	928	4	NA	NA	-12278	-7885	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGCCCAGCTGCCCAGCC	2884	False	NA	NA	False	NA	NA	NA	121509794	121523643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_121510476_121510665_121510739_121511200_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
ENSMUSG00000105004.2_97479720_97517508_1	chr3	+	2023	16	Genic_Genomic	ENSMUSG00000105004.2	novel	3905	1	NA	NA	-37528	-3644	multi-exon	FALSE	non_canonical	0	0	junction_1	0	56	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCGCGCGTGCGGAGTA	NA	False	NA	NA	False	NA	NA	NA	97479719	97517508	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ENSMUSG00000105039.2_125315378_125317323_1	chr5	-	528	3	NNC	ENSMUSG00000105039.2	novel	764	4	NA	NA	32556	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	0.5	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCCTGTTGGCTTTAA	9037	False	NA	NA	False	AATAAA	-35	NA	125317323	125315377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_125315796_125316932_125317002_125317282
ENSMUSG00000105104.2_127347138_127355087_1	chr3	-	941	5	NIC	ENSMUSG00000105104.2	novel	499	2	NA	NA	-3877	2739	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCCGCCAACTTAAGTG	NA	False	NA	NA	False	CATAAA	-15	NA	127355087	127347137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544
ENSMUSG00000105255.2_45591395_45607522_1	chr5	+	1319	7	NNC	ENSMUSG00000105255.2	novel	338	2	NA	NA	-336	42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2531	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTCAGAAAGGTTGCCC	NA	False	NA	NA	False	NA	NA	NA	45591394	45607522	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_45592021_45595189_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
ENSMUSG00000105260.2_41432012_41447627_1	chr3	-	790	4	Fusion	ENSMUSG00000105260.2_ENSMUSG00000097639.3	novel	305	2	NA	NA	0	0	multi-exon	FALSE	canonical	3	25	junction_3	23.3666428910958	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAAGCTCTCCTTCGTGT	NA	False	NA	-10	True	AGTAAA	-16	NA	41447627	41432011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr3_-_41432228_41436231_41436380_41436506_41436880_41447574
ENSMUSG00000105260.2_41432012_41447627_2	chr3	-	1210	4	Fusion	ENSMUSG00000105260.2_ENSMUSG00000097639.3	novel	504	2	NA	NA	0	0	multi-exon	FALSE	canonical	3	17	junction_1	26.5455583227527	597	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAAGCTCTCCTTCGTGT	NA	False	NA	-10	True	AGTAAA	-16	NA	41447627	41432011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr3_-_41432596_41436231_41436380_41436506_41436880_41447522
ENSMUSG00000105339.2_116424813_116456259_1	chr3	+	2715	12	NIC	ENSMUSG00000105339.2	novel	367	2	NA	NA	-507	30401	intron_retention	FALSE	non_canonical	0	0	junction_1	0	550	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCGGGCGGCGCGTCACA	NA	False	NA	NA	False	NA	NA	NA	116424812	116456259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ENSMUSG00000105339.2_116424950_116456259_1	chr3	+	2578	12	NIC	ENSMUSG00000105339.2	novel	367	2	NA	NA	-370	30401	intron_retention	FALSE	non_canonical	0	0	junction_1	0	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCGGGCGGCGCGTCACA	NA	False	NA	NA	False	NA	NA	NA	116424949	116456259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ENSMUSG00000105339.2_116425652_116456259_1	chr3	+	1876	12	NIC	ENSMUSG00000105339.2	novel	367	2	NA	NA	332	30401	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCGGGCGGCGCGTCACA	NA	False	NA	NA	False	NA	NA	NA	116425651	116456259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ENSMUSG00000105512.2_88593121_88617006_1	chr3	-	2228	11	NIC	ENSMUSG00000105512.2	novel	1204	2	NA	NA	-23302	-790	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGCCCTCCCGCCACT	6133	False	NA	NA	False	NA	NA	NA	88617006	88593120	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086
ENSMUSG00000105512.2_88593121_88620161_1	chr3	-	2900	14	NIC	ENSMUSG00000105512.2	novel	1204	2	NA	NA	-26457	-790	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGCCCTCCCGCCACT	2978	False	NA	NA	False	NA	NA	NA	88620161	88593120	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
ENSMUSG00000105552.2_89913527_89959782_1	chr3	+	3436	26	NIC	ENSMUSG00000105552.2	novel	493	3	NA	NA	5105	31030	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	704	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGGCCGCGCCGCCCC	631	False	NA	NA	False	NA	NA	NA	89913526	89959782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_+_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ENSMUSG00000105552.2_89916563_89959782_1	chr3	+	2744	23	Genic_Genomic	ENSMUSG00000105552.2	novel	493	3	NA	NA	8141	31030	multi-exon	FALSE	non_canonical	0	0	junction_1	0	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGGCCGCGCCGCCCC	3667	False	NA	NA	False	NA	NA	NA	89916562	89959782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ENSMUSG00000105552.2_89916563_89959782_2	chr3	+	2711	23	Genic_Genomic	ENSMUSG00000105552.2	novel	493	3	NA	NA	8141	31030	multi-exon	FALSE	non_canonical	0	0	junction_1	0	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGGCCGCGCCGCCCC	3667	False	NA	NA	False	NA	NA	NA	89916562	89959782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ENSMUSG00000105552.2_89916563_89959782_3	chr3	+	2836	24	Genic_Genomic	ENSMUSG00000105552.2	novel	493	3	NA	NA	8141	31030	multi-exon	FALSE	non_canonical	0	0	junction_1	0	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGGCCGCGCCGCCCC	3667	False	NA	NA	False	NA	NA	NA	89916562	89959782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ENSMUSG00000105552.2_89916563_89959782_4	chr3	+	2851	24	Genic_Genomic	ENSMUSG00000105552.2	novel	493	3	NA	NA	8141	31030	multi-exon	FALSE	non_canonical	0	0	junction_1	0	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGGCCGCGCCGCCCC	3667	False	NA	NA	False	NA	NA	NA	89916562	89959782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ENSMUSG00000105662.5_35672772_35691163_1	chr3	-	1086	7	NNC	ENSMUSG00000105662.5	novel	3135	19	NA	NA	551	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	14.0564338768172	77	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGGTTAGACTCCAAT	NA	False	NA	NA	False	AATAAA	-15	NA	35691163	35672771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_35673025_35673834_35673956_35677231_35677418_35678500_35678611_35681522_35681682_35682985_35683124_35691044
ENSMUSG00000105662.5_35672772_35691297_1	chr3	-	1220	7	NNC	ENSMUSG00000105662.5	novel	3135	19	NA	NA	417	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	14.0564338768172	239	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGGTTAGACTCCAAT	NA	False	NA	NA	False	AATAAA	-15	NA	35691297	35672771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_35673025_35673834_35673956_35677231_35677418_35678500_35678611_35681522_35681682_35682985_35683124_35691044
ENSMUSG00000105692.2_89116394_89121214_1	chr3	+	1079	8	Genic_Genomic	ENSMUSG00000105692.2	novel	2740	1	NA	NA	-1338	743	multi-exon	TRUE	non_canonical	0	0	junction_1	0	660	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCGGAAGCACCTTCTCG	NA	False	NA	NA	False	NA	NA	NA	89116393	89121214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117981_89119989_89120070_89120183_89120254_89121125
ENSMUSG00000105692.2_89116394_89121214_2	chr3	+	1083	8	Genic_Genomic	ENSMUSG00000105692.2	novel	2740	1	NA	NA	-1338	743	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1778	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCGGAAGCACCTTCTCG	NA	False	NA	NA	False	NA	NA	NA	89116393	89121214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_+_89116724_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
ENSMUSG00000105813.2_121220146_121251599_1	chr3	-	1787	7	Genic_Genomic	ENSMUSG00000105813.2	novel	3339	1	NA	NA	-30376	-2261	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2859	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCCCCGGGCCTCCAG	NA	False	NA	NA	False	NA	NA	NA	121251599	121220145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_-_121220478_121243597_121243720_121243940_121244008_121245031_121245165_121245531_121245649_121248595_121248743_121250730
ENSMUSG00000105813.2_121220146_121251599_2	chr3	-	1792	7	Genic_Genomic	ENSMUSG00000105813.2	novel	3339	1	NA	NA	-30376	-2261	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3045	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCCCCGGGCCTCCAG	NA	False	NA	NA	False	NA	NA	NA	121251599	121220145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_-_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
ENSMUSG00000105813.2_121220146_121251848_1	chr3	-	2036	7	Genic_Genomic	ENSMUSG00000105813.2	novel	3339	1	NA	NA	-30625	-2261	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6714	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCCCCGGGCCTCCAG	NA	False	NA	NA	False	NA	NA	NA	121251848	121220145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr3_-_121220478_121243597_121243720_121243940_121244008_121245031_121245165_121245531_121245649_121248595_121248743_121250730
ENSMUSG00000105837.5_129326035_129427999_1	chr3	-	1958	4	NIC	ENSMUSG00000105837.5	novel	421	3	NA	NA	-101962	-4754	intron_retention	FALSE	non_canonical	0	0	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTTTTTACTCGTCTACA	NA	False	NA	NA	False	AATGAA	-37	NA	129427999	129326034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_129326418_129398689_129398822_129421931_129422084_129426708
ENSMUSG00000105837.5_129326035_129428768_1	chr3	-	2727	4	NIC	ENSMUSG00000105837.5	novel	421	3	NA	NA	-102731	-4754	intron_retention	FALSE	non_canonical	0	0	junction_1	0	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTTTTTACTCGTCTACA	NA	False	NA	NA	False	AATGAA	-37	NA	129428768	129326034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr3_-_129326418_129398689_129398822_129421931_129422084_129426708
ENSMUSG00000105960.2_129551568_129557534_1	chr3	+	2467	2	ISM	ENSMUSG00000105960.2	ENSMUST00000199846.2	3871	5	4161	-1	4161	1	3prime_fragment	FALSE	canonical	3	92	junction_1	0	586	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAGCACTGTCTAATT	NA	False	NA	3	True	NA	NA	NA	129551567	129557534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr3_+_129551788_129555287
ENSMUSG00000105987.5_23903294_23917664_1	chr5	-	2281	4	FSM	ENSMUSG00000105987.5	ENSMUST00000198984.5	345	4	-4	-1932	0	0	multi-exon	FALSE	canonical	2	2	junction_3	6.68331255192114	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTCTAGTCTGAGGTCT	5257	False	NA	NA	False	NA	NA	NA	23917664	23903293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_23905472_23915363_23915407_23916113_23916149_23917639
ENSMUSG00000105987.5_23903294_23917664_2	chr5	-	1672	5	NNC	ENSMUSG00000105987.5	novel	345	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.74536878161602	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTCTAGTCTGAGGTCT	5257	False	NA	NA	False	NA	NA	NA	23917664	23903293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_23904335_23904943_23905472_23915363_23915407_23916113_23916149_23917639
ENSMUSG00000105987.5_23903294_23917664_3	chr5	-	2264	4	NIC	ENSMUSG00000105987.5	novel	345	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_1	7.54247233265651	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTCTAGTCTGAGGTCT	5257	False	NA	NA	False	NA	NA	NA	23917664	23903293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_23905455_23915363_23915407_23916113_23916149_23917639
ENSMUSG00000105987.5_23903411_23917664_2	chr5	-	2164	4	FSM	ENSMUSG00000105987.5	ENSMUST00000198984.5	345	4	-4	-1815	0	-117	multi-exon	FALSE	canonical	2	2	junction_3	6.68331255192114	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAACTGGTTCTAAAAGG	5257	False	NA	NA	False	NA	NA	NA	23917664	23903410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_23905472_23915363_23915407_23916113_23916149_23917639
ENSMUSG00000105987.5_23904537_23917664_1	chr5	-	1038	4	FSM	ENSMUSG00000105987.5	ENSMUST00000198984.5	345	4	-4	-689	0	-469	multi-exon	FALSE	canonical	2	2	junction_3	6.68331255192114	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGCCTCTGAAGTAAGA	5257	False	NA	NA	False	AATAAA	-26	NA	23917664	23904536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_23905472_23915363_23915407_23916113_23916149_23917639
ENSMUSG00000106035.2_104194392_104213245_1	chr5	-	1523	8	Genic_Genomic	ENSMUSG00000106035.2	novel	2779	1	NA	NA	-17982	-1907	multi-exon	FALSE	non_canonical	0	0	junction_1	0	504	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCAGGCCAGTCACGTG	NA	False	NA	NA	False	NA	NA	NA	104213245	104194391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_104194705_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ENSMUSG00000106035.2_104194661_104213245_1	chr5	-	1254	8	Genic_Genomic	ENSMUSG00000106035.2	novel	2779	1	NA	NA	-17982	-2176	multi-exon	FALSE	non_canonical	0	0	junction_1	0	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCGCGGCAGGACGCGGA	NA	False	NA	NA	False	NA	NA	NA	104213245	104194660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_104194705_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ENSMUSG00000106223.2_41461644_41482880_1	chr3	-	833	5	NNC	ENSMUSG00000106223.2	novel	643	3	NA	NA	-1	14038	at_least_one_novel_splicesite	FALSE	non_canonical	1	17	junction_1	46.618129520606	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTGGTCATGGTGTC	NA	False	NA	1	True	NA	NA	NA	41482880	41461643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_41461800_41464877_41465010_41476693_41476891_41477378_41477680_41482833
ENSMUSG00000106223.2_41461644_41482880_2	chr3	-	847	5	NNC	ENSMUSG00000106223.2	novel	643	3	NA	NA	-1	14038	at_least_one_novel_splicesite	FALSE	non_canonical	1	17	junction_1	37.1374137494791	461	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTGGTCATGGTGTC	NA	False	NA	1	True	NA	NA	NA	41482880	41461643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_41461800_41464877_41465010_41476693_41476891_41477364_41477680_41482833
ENSMUSG00000106223.2_41476639_41482880_1	chr3	-	485	3	NNC	ENSMUSG00000106223.2	novel	643	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_2	22	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGACTTGTTTAACTATT	NA	False	NA	-2	True	AATAAA	-27	NA	41482880	41476638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_-_41476891_41477378_41477565_41482833
ENSMUSG00000106588.2_3394312_3571069_1	chr5	-	1314	7	NIC	ENSMUSG00000106588.2	novel	1232	2	NA	NA	-40196	128549	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACACGCCTCGGGGAGTCG	NA	False	NA	NA	False	NA	NA	NA	3571069	3394311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ENSMUSG00000106631.3_107696888_107745505_1	chr5	+	1960	19	Fusion	ENSMUSG00000033773.15_ENSMUSG00000089798.11	novel	2992	12	NA	NA	14265	-4158	multi-exon	FALSE	non_canonical	0	0	junction_1	0	625	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTCCGCCGCTCGCCCCG	8719	False	NA	NA	False	NA	NA	NA	107696887	107745505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr5_+_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ENSMUSG00000106674.2_149565075_149572328_1	chr5	+	1350	3	NNC	ENSMUSG00000106674.2	novel	299	2	NA	NA	0	1073	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6.5	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTTTGAGTCCTGGG	NA	False	NA	5	True	NA	NA	NA	149565074	149572328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_149565217_149571098_149571848_149571869
ENSMUSG00000106698.2_92431869_92457848_1	chr5	+	4985	22	NIC	ENSMUSG00000106698.2	novel	528	2	NA	NA	-6042	7229	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	656	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACGGCACGTGGGACAC	NA	False	NA	NA	False	NA	NA	NA	92431868	92457848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ENSMUSG00000106698.2_92434600_92457848_1	chr5	+	2254	22	NIC	ENSMUSG00000106698.2	novel	528	2	NA	NA	-3311	7229	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACGGCACGTGGGACAC	NA	False	NA	NA	False	NA	NA	NA	92434599	92457848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ENSMUSG00000106820.2_147355411_147359584_1	chr5	+	811	3	FSM	ENSMUSG00000106820.2	ENSMUST00000201128.2	1081	3	0	270	0	-270	multi-exon	FALSE	canonical	3	33	junction_2	30.5	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGATGATTTGAATATG	NA	False	NA	4	True	NA	NA	NA	147355410	147359584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_147355512_147357439_147357607_147359041
ENSMUSG00000106864.4_31314552_31337255_1	chr5	-	3116	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	233	1203	0	236	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTGGGTGTTTGGA	NA	False	NA	0	True	AGTAAA	-24	NA	31337255	31314551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ENSMUSG00000106864.4_31314788_31337255_1	chr5	-	3009	20	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	165	junction_17	146.210507369935	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTTTAGGCCTACATG	NA	False	NA	NA	False	NA	NA	NA	31337255	31314787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ENSMUSG00000106864.4_31314788_31337255_2	chr5	-	2880	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	233	1439	0	0	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTTTAGGCCTACATG	NA	False	NA	NA	False	NA	NA	NA	31337255	31314787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ENSMUSG00000106864.4_31315091_31337255_1	chr5	-	2577	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	233	1742	0	-303	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTATGGATGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	31337255	31315090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ENSMUSG00000106864.4_31315091_31337255_2	chr5	-	2706	20	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	0	-303	combination_of_known_junctions	FALSE	canonical	3	165	junction_17	146.210507369935	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTATGGATGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	31337255	31315090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ENSMUSG00000106864.4_31315745_31337488_1	chr5	-	2623	17	ISM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	0	2396	0	-957	5prime_fragment	FALSE	canonical	3	356	junction_16	87.2019701253934	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACCTACACTGAAACCA	NA	False	NA	NA	False	NA	NA	NA	31337488	31315744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ENSMUSG00000106894.2_31855340_32242083_1	chr5	-	1353	12	NIC	ENSMUSG00000106894.2	novel	2683	3	NA	NA	-73876	307981	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCGAACCGCGGGCCGG	NA	False	NA	NA	False	NA	NA	NA	32242083	31855339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
ENSMUSG00000106894.2_31855340_32242306_1	chr5	-	1570	12	NNC	ENSMUSG00000106894.2	novel	2683	3	NA	NA	-74099	307981	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCGAACCGCGGGCCGG	NA	False	NA	NA	False	NA	NA	NA	32242306	31855339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162059_32162125_32164578_32164662_32214854_32215009_32241924
ENSMUSG00000106918.4_31771316_31779988_1	chr5	+	455	3	NNC	ENSMUSG00000106918.4	novel	478	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1166.5	5847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCTCTTAGAGGTAT	NA	False	NA	19	True	AATAAA	-22	NA	31771315	31779988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_31771367_31773695_31773832_31779720
ENSMUSG00000106918.4_31771316_31779988_2	chr5	+	426	3	NIC	ENSMUSG00000106918.4	novel	478	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	1111.5	4944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCTCTTAGAGGTAT	NA	False	NA	19	True	AATAAA	-22	NA	31771315	31779988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_31771367_31773724_31773832_31779720
ENSMUSG00000106918.4_31771316_31779988_3	chr5	+	434	3	NNC	ENSMUSG00000106918.4	novel	478	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1166.5	5847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCTCTTAGAGGTAT	NA	False	NA	19	True	AATAAA	-22	NA	31771315	31779988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_+_31771375_31773724_31773832_31779720
ENSMUSG00000106943.3_74253744_74254998_1	chr5	+	787	2	NIC	ENSMUSG00000106943.3	novel	575	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	119	junction_1	0	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTTCACTTGTTCTT	NA	False	NA	19	True	AATAAA	-21	NA	74253743	74254998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_+_74254081_74254548
ENSMUSG00000106967.2_4826594_4831400_1	chr16	+	1374	11	Genic_Genomic	ENSMUSG00000106967.2	novel	469	3	NA	NA	360	118	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1431	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCAGGAGCTTGGCGC	NA	False	NA	NA	False	NA	NA	NA	4826593	4831400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
ENSMUSG00000106967.2_4826594_4831400_2	chr16	+	1328	11	Genic_Genomic	ENSMUSG00000106967.2	novel	469	3	NA	NA	360	118	multi-exon	FALSE	non_canonical	0	0	junction_1	0	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCAGGAGCTTGGCGC	NA	False	NA	NA	False	NA	NA	NA	4826593	4831400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828761_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
ENSMUSG00000106967.2_4826594_4831400_3	chr16	+	1368	11	Genic_Genomic	ENSMUSG00000106967.2	novel	469	3	NA	NA	360	118	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1041	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCAGGAGCTTGGCGC	NA	False	NA	NA	False	NA	NA	NA	4826593	4831400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831332
ENSMUSG00000106967.2_4826594_4831400_4	chr16	+	1922	10	Genic_Genomic	ENSMUSG00000106967.2	novel	469	3	NA	NA	360	118	multi-exon	FALSE	non_canonical	0	0	junction_1	0	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCAGGAGCTTGGCGC	NA	False	NA	NA	False	NA	NA	NA	4826593	4831400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4830160_4830290_4830374_4831166_4831239_4831326
ENSMUSG00000106968.2_74103724_74106673_1	chr5	+	1802	2	FSM	ENSMUSG00000106968.2	ENSMUST00000202711.2	848	2	0	-954	0	954	multi-exon	FALSE	canonical	3	15	junction_1	0	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGGAATCTGTTTCCTT	NA	False	NA	NA	False	ACTAAA	-16	NA	74103723	74106673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_74103968_74105115
ENSMUSG00000107142.2_31643977_31646494_1	chr5	-	1424	2	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1202	0	intron_retention	FALSE	canonical	3	94	junction_1	0	1203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTGGTTATGTCTTT	720	False	NA	-2	True	NA	NA	NA	31646494	31643976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_31645334_31646427
ENSMUSG00000107142.2_31643977_31646494_2	chr5	-	1296	2	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1202	0	intron_retention	FALSE	canonical	3	124	junction_1	0	1122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTGGTTATGTCTTT	720	False	NA	-2	True	NA	NA	NA	31646494	31643976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_31645206_31646427
ENSMUSG00000107142.2_31652111_31668359_1	chr5	-	1229	14	NIC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-15836	-8134	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCCACGCCCACCACTCA	NA	False	NA	NA	False	NA	NA	NA	31668359	31652110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ENSMUSG00000107142.2_31652111_31668761_1	chr5	-	1622	14	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-16238	-8134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1366	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCCACGCCCACCACTCA	NA	False	NA	NA	False	NA	NA	NA	31668761	31652110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr5_-_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662371_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ENSMUSG00000107142.2_31652111_31668761_2	chr5	-	1631	14	NIC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-16238	-8134	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCCACGCCCACCACTCA	NA	False	NA	NA	False	NA	NA	NA	31668761	31652110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ENSMUSG00000107142.2_31652111_31670248_1	chr5	-	3118	14	NIC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-17725	-8134	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCCACGCCCACCACTCA	NA	False	NA	NA	False	NA	NA	NA	31670248	31652110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ENSMUSG00000107179.2_120938259_120950553_1	chr5	+	1889	7	Genic_Genomic	ENSMUSG00000107179.2	novel	859	3	NA	NA	22398	6865	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACATTCTTCCCTGGGCCG	NA	False	NA	NA	False	AAGAAA	-28	NA	120938258	120950553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_120939129_120940105_120940260_120940886_120941123_120943468_120943666_120946024_120946314_120946645_120946734_120950498
ENSMUSG00000107181.2_42727475_42748727_1	chr7	+	2293	4	NNC	ENSMUSG00000107181.2	novel	378	4	NA	NA	0	2884	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_3	9.20144916122817	142	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATAACATGGTCAACTT	NA	False	NA	NA	False	NA	NA	NA	42727474	42748727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_42727598_42741712_42741840_42742038_42742100_42746745
ENSMUSG00000107191.2_120751192_120765692_1	chr5	-	2969	20	Genic_Genomic	ENSMUSG00000107191.2	novel	1307	1	NA	NA	-6	13188	multi-exon	TRUE	non_canonical	0	0	junction_1	0	486	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTAGACCCGGAAGAGG	8443	False	NA	NA	False	NA	NA	NA	120765692	120751191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ENSMUSG00000107230.2_85924494_85938625_1	chr6	+	1167	9	NIC	ENSMUSG00000107230.2	novel	894	3	NA	NA	-14111	-40283	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	787	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCGACGCGTCGACGTCT	8701	False	NA	NA	False	NA	NA	NA	85924493	85938625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
ENSMUSG00000107265.2_31273956_31294974_1	chr5	-	1536	9	NIC	ENSMUSG00000107265.2	novel	961	3	NA	NA	-286	19141	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCCCTTCCTCCCTAG	928	False	NA	NA	False	NA	NA	NA	31294974	31273955	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr5_-_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294096_31294120_31294231_31294357_31294464_31294558_31294820
ENSMUSG00000107276.2_38196626_38294163_1	chr5	-	1516	11	Genic_Genomic	ENSMUSG00000107276.2	novel	1704	1	NA	NA	-722	95112	multi-exon	FALSE	non_canonical	0	0	junction_1	0	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGACCCCGGCAAGAACTC	NA	False	NA	NA	False	NA	NA	NA	38294163	38196625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293606
ENSMUSG00000107283.4_31298007_31311566_2	chr5	-	1692	8	FSM	ENSMUSG00000107283.4	ENSMUST00000202241.4	903	8	6	-795	0	0	multi-exon	FALSE	canonical	3	21	junction_2	130.575335984048	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAATTGTGTCTTTA	NA	False	NA	NA	False	TTTAAA	-4	NA	31311566	31298006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31299195_31302043_31302097_31302583_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
ENSMUSG00000107283.4_31298802_31311566_1	chr5	-	891	8	FSM	ENSMUSG00000107283.4	ENSMUST00000154241.8	1724	8	29	804	0	0	multi-exon	FALSE	canonical	3	233	junction_7	57.209960599853	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCATGCTATGGGGTTG	NA	False	NA	11	True	NA	NA	NA	31311566	31298801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
ENSMUSG00000107319.2_67418039_67443872_1	chr5	-	1184	8	Genic_Genomic	ENSMUSG00000107319.2	novel	1292	1	NA	NA	-25267	-725	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACCGGAAGTGATCCTT	NA	False	NA	NA	False	NA	NA	NA	67443872	67418038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ENSMUSG00000107319.2_67418039_67445101_1	chr5	-	1620	9	Genic_Genomic	ENSMUSG00000107319.2	novel	1292	1	NA	NA	-26496	-725	multi-exon	FALSE	non_canonical	0	0	junction_1	0	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACCGGAAGTGATCCTT	NA	False	NA	NA	False	NA	NA	NA	67445101	67418038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
ENSMUSG00000107319.2_67418097_67443872_1	chr5	-	1283	7	Genic_Genomic	ENSMUSG00000107319.2	novel	1292	1	NA	NA	-25267	-783	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGAGCTTCGGAGAAAGGC	NA	False	NA	NA	False	NA	NA	NA	67443872	67418096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ENSMUSG00000107319.2_67418097_67445101_1	chr5	-	2355	8	Genic_Genomic	ENSMUSG00000107319.2	novel	1292	1	NA	NA	-26496	-783	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGAGCTTCGGAGAAAGGC	NA	False	NA	NA	False	NA	NA	NA	67445101	67418096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_-_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ENSMUSG00000107335.2_135038545_135041029_1	chr5	-	1095	6	Fusion	ENSMUSG00000085042.9_ENSMUSG00000107335.2	novel	604	4	NA	NA	613	2423	multi-exon	FALSE	non_canonical	0	0	junction_1	0	682	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTAGGGCTGTCCTGCG	NA	False	NA	NA	False	NA	NA	NA	135041029	135038544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr5_-_135038694_135038835_135038972_135039740_135039915_135040063_135040229_135040337_135040520_135040740
ENSMUSG00000107335.2_135038545_135041029_2	chr5	-	1212	5	Fusion	ENSMUSG00000085042.9_ENSMUSG00000107335.2	novel	604	4	NA	NA	613	2423	intron_retention	FALSE	non_canonical	0	0	junction_1	0	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTAGGGCTGTCCTGCG	NA	False	NA	NA	False	NA	NA	NA	135041029	135038544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr5_-_135038972_135039740_135039915_135040094_135040235_135040337_135040520_135040740
ENSMUSG00000107335.2_135038545_135041029_3	chr5	-	1101	6	Fusion	ENSMUSG00000085042.9_ENSMUSG00000107335.2	novel	604	4	NA	NA	613	2423	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1752	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTAGGGCTGTCCTGCG	NA	False	NA	NA	False	NA	NA	NA	135041029	135038544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr5_-_135038694_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
ENSMUSG00000107335.2_135038545_135041029_4	chr5	-	1120	6	Fusion	ENSMUSG00000085042.9_ENSMUSG00000107335.2	novel	604	4	NA	NA	613	2423	multi-exon	FALSE	non_canonical	0	0	junction_1	0	891	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTAGGGCTGTCCTGCG	NA	False	NA	NA	False	NA	NA	NA	135041029	135038544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr5_-_135038694_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040721
ENSMUSG00000107368.2_126798959_126826088_1	chr6	+	1170	11	Genic_Genomic	ENSMUSG00000107368.2	novel	398	2	NA	NA	-381	23948	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5063	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCACGGCCGGTGCTTCC	NA	False	NA	NA	False	NA	NA	NA	126798958	126826088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826026
ENSMUSG00000107406.2_71520876_71557154_1	chr6	-	1150	6	NIC	ENSMUSG00000107406.2	novel	541	2	NA	NA	-36056	-700	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1718	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGCCCAGAGAAGGGCGC	NA	False	NA	NA	False	GGGGCT	-16	NA	71557154	71520875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ENSMUSG00000107406.2_71520913_71557154_1	chr6	-	1113	6	NIC	ENSMUSG00000107406.2	novel	541	2	NA	NA	-36056	-737	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCAGCCGCCTGGGCGGGG	NA	False	NA	NA	False	NA	NA	NA	71557154	71520912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ENSMUSG00000107476.4_48499315_48502034_1	chr6	+	2024	3	Genic_Genomic	ENSMUSG00000107476.4	novel	1776	6	NA	NA	9943	688	multi-exon	TRUE	non_canonical	0	0	junction_1	0	435	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCTCCCCCTGCAGCCC	NA	False	NA	NA	False	NA	NA	NA	48499314	48502034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_48500391_48500868_48501778_48501995
ENSMUSG00000107476.4_48499315_48502034_2	chr6	+	2190	3	Genic_Genomic	ENSMUSG00000107476.4	novel	1776	6	NA	NA	9943	688	multi-exon	FALSE	non_canonical	0	0	junction_1	220.5	1317	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCTCCCCCTGCAGCCC	NA	False	NA	NA	False	NA	NA	NA	48499314	48502034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_48500380_48500857_48501909_48501960
ENSMUSG00000107476.4_48499315_48502034_3	chr6	+	2190	3	Genic_Genomic	ENSMUSG00000107476.4	novel	1776	6	NA	NA	9943	688	multi-exon	FALSE	non_canonical	0	0	junction_1	220.5	1245	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCTCCCCCTGCAGCCC	NA	False	NA	NA	False	NA	NA	NA	48499314	48502034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_48500391_48500868_48501909_48501960
ENSMUSG00000107476.4_48501307_48502034_1	chr6	+	510	2	NNC	ENSMUSG00000107476.4	novel	1776	6	NA	NA	11935	688	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCTCCCCCTGCAGCCC	NA	False	NA	NA	False	NA	NA	NA	48501306	48502034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_48501778_48501995
ENSMUSG00000107482.3_43093554_43104222_1	chr7	+	674	4	ISM	ENSMUSG00000004610.5	ENSMUST00000206196.2	551	5	0	1775	0	-1775	5prime_fragment	FALSE	canonical	3	1745	junction_1	133.129844721443	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTGTAACAGCTTTAC	1955	False	NA	NA	False	NA	NA	NA	43093553	43104222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941
ENSMUSG00000107561.2_88234316_88423489_1	chr6	+	2647	7	Genic_Genomic	ENSMUSG00000107561.2	novel	742	2	NA	NA	-188353	-6	multi-exon	FALSE	non_canonical	0	0	junction_1	0	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCCAGCCCCGCGGTCC	NA	False	NA	NA	False	NA	NA	NA	88234315	88423489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ENSMUSG00000107561.2_88234855_88423489_1	chr6	+	2108	7	Genic_Genomic	ENSMUSG00000107561.2	novel	742	2	NA	NA	-187814	-6	multi-exon	FALSE	non_canonical	0	0	junction_1	0	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCCAGCCCCGCGGTCC	NA	False	NA	NA	False	NA	NA	NA	88234854	88423489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ENSMUSG00000107561.2_88289555_88423489_1	chr6	+	1003	5	Genic_Genomic	ENSMUSG00000107561.2	novel	742	2	NA	NA	-133114	-6	multi-exon	FALSE	non_canonical	0	0	junction_1	0	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCCAGCCCCGCGGTCC	NA	False	NA	NA	False	NA	NA	NA	88289554	88423489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_88289786_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ENSMUSG00000107593.2_87606731_87649143_1	chr6	+	1951	10	Fusion	ENSMUSG00000107593.2_ENSMUSG00000071332.13	novel	381	5	NA	NA	-28005	-4175	intron_retention	FALSE	non_canonical	0	0	junction_1	0	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACGCACACCCACAATCT	NA	False	NA	NA	False	NA	NA	NA	87606730	87649143	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr6_+_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
ENSMUSG00000107593.2_87630518_87649179_1	chr6	+	1221	6	Fusion	ENSMUSG00000107593.2_ENSMUSG00000071332.13	novel	381	5	NA	NA	-4218	-4139	multi-exon	FALSE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGACTCATGGAACGCTG	NA	False	NA	NA	False	NA	NA	NA	87630517	87649179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr6_+_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
ENSMUSG00000107608.2_117883407_117902583_1	chr6	-	2177	4	Genic_Genomic	ENSMUSG00000042087.6_ENSMUSG00000107608.2	novel	1192	1	NA	NA	-7900	-638	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4332	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAATGACCGCATGCGT	5174	False	NA	NA	False	NA	NA	NA	117902583	117883406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_117883479_117894430_117894560_117896059_117896121_117900668
ENSMUSG00000107608.2_117883756_117902583_1	chr6	-	2140	4	Genic_Genomic	ENSMUSG00000042087.6_ENSMUSG00000107608.2	novel	1192	1	NA	NA	-7900	315	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9133	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGCAAGACGGTGATGG	5174	False	NA	NA	False	NA	NA	NA	117902583	117883755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_117883801_117894430_117894560_117896059_117896111_117900668
ENSMUSG00000107608.2_117883756_117902583_2	chr6	-	2144	4	Genic_Genomic	ENSMUSG00000042087.6_ENSMUSG00000107608.2	novel	1192	1	NA	NA	-7900	315	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9235	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGCAAGACGGTGATGG	5174	False	NA	NA	False	NA	NA	NA	117902583	117883755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_117883801_117894436_117894560_117896059_117896121_117900668
ENSMUSG00000107608.2_117883756_117902583_3	chr6	-	2131	4	Genic_Genomic	ENSMUSG00000042087.6_ENSMUSG00000107608.2	novel	1192	1	NA	NA	-7900	315	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6715	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGCAAGACGGTGATGG	5174	False	NA	NA	False	NA	NA	NA	117902583	117883755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_117883801_117894430_117894560_117896059_117896121_117900687
ENSMUSG00000107702.2_136495844_136576701_1	chr6	-	3237	12	NIC	ENSMUSG00000107702.2	novel	675	3	NA	NA	-80672	-3870	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAACAAACCCGCTTCTC	NA	False	NA	NA	False	NA	NA	NA	136576701	136495843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_136495962_136536761_136538438_136540757_136540845_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647
ENSMUSG00000107702.2_136495844_136583524_1	chr6	-	3679	15	NIC	ENSMUSG00000107702.2	novel	675	3	NA	NA	-87495	-3870	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAACAAACCCGCTTCTC	NA	False	NA	NA	False	NA	NA	NA	136583524	136495843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ENSMUSG00000107702.2_136495844_136584066_1	chr6	-	4221	15	NIC	ENSMUSG00000107702.2	novel	675	3	NA	NA	-88037	-3870	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAACAAACCCGCTTCTC	NA	False	NA	NA	False	NA	NA	NA	136584066	136495843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_-_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ENSMUSG00000107909.2_148672181_148732962_1	chr6	+	5357	25	Genic_Genomic	ENSMUSG00000107909.2	novel	1661	1	NA	NA	-60769	-1648	multi-exon	FALSE	non_canonical	0	0	junction_1	0	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCCGGTGGGAGGTGGA	NA	False	NA	NA	False	NA	NA	NA	148672180	148732962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ENSMUSG00000107909.2_148673817_148732962_1	chr6	+	3721	25	Genic_Genomic	ENSMUSG00000107909.2	novel	1661	1	NA	NA	-59133	-1648	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCCGGTGGGAGGTGGA	NA	False	NA	NA	False	NA	NA	NA	148673816	148732962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ENSMUSG00000107944.2_113392290_113396296_2	chr6	+	1332	8	Genic_Genomic	ENSMUSG00000107944.2	novel	3111	1	NA	NA	-1143	-247	multi-exon	FALSE	non_canonical	0	0	junction_1	0	984	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACGCATGCGTGTCCACG	1574	False	NA	NA	False	NA	NA	NA	113392289	113396296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_+_113392684_113393267_113393408_113393749_113393874_113394101_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
ENSMUSG00000107961.2_86713829_86770546_1	chr6	+	1976	13	NIC	ENSMUSG00000107961.2	novel	336	2	NA	NA	3358	56499	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGACCCGCCCAGTCTC	NA	False	NA	NA	False	NA	NA	NA	86713828	86770546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr6_+_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
ENSMUSG00000108111.2_90495784_90496469_1	chr6	+	607	2	NNC	ENSMUSG00000108111.2	novel	661	2	NA	NA	32409	7	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	0	198	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTGTGTAATTATACAA	9363	False	NA	NA	False	AATACA	-18	NA	90495783	90496469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_90495862_90495940
ENSMUSG00000108170.2_52690748_52743473_1	chr6	-	2959	18	Genic_Genomic	ENSMUSG00000108170.2	novel	612	1	NA	NA	-52533	-419	multi-exon	FALSE	non_canonical	0	0	junction_1	0	568	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGGAGAGCCGGCGGTGC	NA	False	NA	NA	False	NA	NA	NA	52743473	52690747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ENSMUSG00000108170.2_52690748_52743765_1	chr6	-	3251	18	Genic_Genomic	ENSMUSG00000108170.2	novel	612	1	NA	NA	-52825	-419	multi-exon	FALSE	non_canonical	0	0	junction_1	0	716	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGGAGAGCCGGCGGTGC	NA	False	NA	NA	False	NA	NA	NA	52743765	52690747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ENSMUSG00000108175.2_53821955_53835998_1	chr6	+	618	5	NNC	ENSMUSG00000108175.2	novel	2065	5	NA	NA	26227	-9170	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	6.80073525436772	97	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTTGTTCTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	53821954	53835998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_+_53822096_53828082_53828119_53834180_53834359_53835502_53835591_53835823
ENSMUSG00000108353.2_127591805_127592911_1	chr7	+	637	4	Genic_Genomic	ENSMUSG00000108353.2	novel	3330	1	NA	NA	-636	-2859	multi-exon	FALSE	non_canonical	0	0	junction_1	0	241	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGTCAGCTGCTTAGGC	3039	False	NA	NA	False	NA	NA	NA	127591804	127592911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_127591883_127591992_127592138_127592286_127592344_127592554
ENSMUSG00000108368.2_72575611_72584471_1	chr6	-	1931	11	Genic_Genomic	ENSMUSG00000108368.2	novel	2499	1	NA	NA	-1986	4376	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTGCCAGGGCTCGGAA	NA	False	NA	NA	False	NA	NA	NA	72584471	72575610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_72575780_72577955_72578139_72578458_72578695_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ENSMUSG00000108368.2_72575611_72584471_2	chr6	-	1932	11	Genic_Genomic	ENSMUSG00000108368.2	novel	2499	1	NA	NA	-1986	4376	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1243	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTGCCAGGGCTCGGAA	NA	False	NA	NA	False	NA	NA	NA	72584471	72575610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580830_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ENSMUSG00000108368.2_72575611_72584471_3	chr6	-	1931	11	Genic_Genomic	ENSMUSG00000108368.2	novel	2499	1	NA	NA	-1986	4376	multi-exon	FALSE	non_canonical	0	0	junction_1	0	577	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTGCCAGGGCTCGGAA	NA	False	NA	NA	False	NA	NA	NA	72584471	72575610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583862_72584017_72584224
ENSMUSG00000108368.2_72575611_72584471_4	chr6	-	1928	11	Genic_Genomic	ENSMUSG00000108368.2	novel	2499	1	NA	NA	-1986	4376	multi-exon	FALSE	non_canonical	0	0	junction_1	0	643	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTGCCAGGGCTCGGAA	NA	False	NA	NA	False	NA	NA	NA	72584471	72575610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_72575780_72577964_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ENSMUSG00000108414.2_8700851_8701967_1	chr19	+	270	3	ISM	ENSMUSG00000108414.2	ENSMUST00000206155.2	605	10	12	1840	0	-249	5prime_fragment	FALSE	canonical	3	444	junction_1	168.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAAGAAAGAAGGTGCTG	NA	False	NA	NA	False	NA	NA	NA	8700850	8701967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_+_8700871_8701504_8701554_8701766
ENSMUSG00000108414.2_8700851_8703709_1	chr19	+	495	10	FSM	ENSMUSG00000108414.2	ENSMUST00000206155.2	605	10	12	98	0	0	multi-exon	FALSE	canonical	3	444	junction_1	203.637719952995	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTACCACATTGTTAAC	NA	False	NA	31	True	AATAAA	-39	NA	8700850	8703709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUSG00000108414.2_8700851_8703709_2	chr19	+	497	9	NNC	ENSMUSG00000108414.2	novel	605	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	365.157414685776	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTACCACATTGTTAAC	NA	False	NA	31	True	AATAAA	-39	NA	8700850	8703709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702811_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUSG00000108414.2_8700851_8703807_1	chr19	+	586	10	NNC	ENSMUSG00000108414.2	novel	605	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	327.75220239205	18746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700850	8703807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_8700871_8701511_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUSG00000108414.2_8700851_8703807_10	chr19	+	578	9	NNC	ENSMUSG00000108414.2	novel	605	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	337.49953703672	2380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700850	8703807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703212_8703602
ENSMUSG00000108414.2_8700851_8703807_11	chr19	+	604	9	NNC	ENSMUSG00000108414.2	novel	605	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	365.157414685776	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700850	8703807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702802_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUSG00000108414.2_8700851_8703807_2	chr19	+	833	9	NIC	ENSMUSG00000108414.2	novel	605	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	444	junction_1	193.874274660152	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700850	8703807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703467_8703602
ENSMUSG00000108414.2_8700851_8703807_3	chr19	+	595	9	NNC	ENSMUSG00000108414.2	novel	605	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	365.157414685776	1731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700850	8703807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702811_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUSG00000108414.2_8700851_8703807_5	chr19	+	580	8	NNC	ENSMUSG00000108414.2	novel	605	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	408.07697353138	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700850	8703807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702811_8702888_8703145_8703212_8703602
ENSMUSG00000108414.2_8700851_8703807_6	chr19	+	768	9	NIC	ENSMUSG00000108414.2	novel	605	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	444	junction_1	215.570717805086	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700850	8703807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUSG00000108414.2_8700851_8703807_7	chr19	+	781	9	NIC	ENSMUSG00000108414.2	novel	605	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	444	junction_1	212.636279830136	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700850	8703807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_8700871_8701504_8701554_8701766_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUSG00000108414.2_8700851_8703807_8	chr19	+	544	9	NIC	ENSMUSG00000108414.2	novel	605	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	346.176955291654	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700850	8703807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_8700871_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUSG00000108414.2_8700851_8703807_9	chr19	+	587	10	NNC	ENSMUSG00000108414.2	novel	605	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_9	342.417584929769	14063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700850	8703807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703608
ENSMUSG00000108420.2_125989888_125995186_1	chr7	+	225	3	Genic_Genomic	ENSMUSG00000108420.2	novel	1888	1	NA	NA	-5142	-1731	multi-exon	FALSE	non_canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACGAAGACAAAAGGGGGA	NA	False	NA	NA	False	NA	NA	NA	125989887	125995186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_125989916_125990442_125990567_125995113
ENSMUSG00000108466.2_71808363_71851690_1	chr6	-	2094	14	Genic_Genomic	ENSMUSG00000108466.2	novel	626	1	NA	NA	-42996	-294	multi-exon	FALSE	non_canonical	0	0	junction_1	0	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGCCTAGCTGCGTCCG	NA	False	NA	NA	False	NA	NA	NA	71851690	71808362	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000108466.2_71808363_71852241_1	chr6	-	2645	14	Genic_Genomic	ENSMUSG00000108466.2	novel	626	1	NA	NA	-43547	-294	multi-exon	FALSE	non_canonical	0	0	junction_1	0	908	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGCCTAGCTGCGTCCG	NA	False	NA	NA	False	NA	NA	NA	71852241	71808362	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000108466.2_71808363_71852241_2	chr6	-	2444	12	Genic_Genomic	ENSMUSG00000108466.2	novel	626	1	NA	NA	-43547	-294	multi-exon	FALSE	non_canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGCCTAGCTGCGTCCG	NA	False	NA	NA	False	NA	NA	NA	71852241	71808362	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000108466.2_71808363_71852241_3	chr6	-	2673	14	Genic_Genomic	ENSMUSG00000108466.2	novel	626	1	NA	NA	-43547	-294	multi-exon	FALSE	non_canonical	0	0	junction_1	0	374	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGCCTAGCTGCGTCCG	NA	False	NA	NA	False	NA	NA	NA	71852241	71808362	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829722_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000108466.2_71808363_71852241_4	chr6	-	2586	13	Genic_Genomic	ENSMUSG00000108466.2	novel	626	1	NA	NA	-43547	-294	multi-exon	FALSE	non_canonical	0	0	junction_1	0	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGCCTAGCTGCGTCCG	NA	False	NA	NA	False	NA	NA	NA	71852241	71808362	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr6_-_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000108491.2_42155252_42158298_1	chr7	-	352	3	NNC	ENSMUSG00000108491.2	novel	417	3	NA	NA	460	1772	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCGCGCCGTCCCCGAA	NA	False	NA	NA	False	NA	NA	NA	42158298	42155251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_42155413_42157017_42157122_42158211
ENSMUSG00000108573.2_121690056_121701059_1	chr7	+	617	5	Genic_Genomic	ENSMUSG00000108573.2	novel	2829	1	NA	NA	-5250	2925	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12265	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGCACTGCGCCGCAGC	NA	False	NA	NA	False	NA	NA	NA	121690055	121701059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_121690187_121690815_121690909_121692839_121692928_121695831_121695955_121700877
ENSMUSG00000108621.2_39201925_39214745_1	chr7	+	753	6	FSM	ENSMUSG00000108621.2	ENSMUST00000188038.3	16021	6	0	15268	0	111	multi-exon	FALSE	canonical	3	26	junction_1	12.1819538662728	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCCAGTAAAGCTCTGAG	NA	False	NA	NA	False	NA	NA	NA	39201924	39214745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_39202036_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
ENSMUSG00000108645.2_63835207_63861176_2	chr7	-	1904	10	Genic_Genomic	ENSMUSG00000108645.2	novel	436	1	NA	NA	-8904	16630	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCAGCCTCGTGACCTG	NA	False	NA	NA	False	NA	NA	NA	63861176	63835206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858034_63858199_63858616_63858741_63859704_63859778_63860585
ENSMUSG00000108645.2_63835298_63861176_1	chr7	-	1910	11	Genic_Genomic	ENSMUSG00000108645.2	novel	436	1	NA	NA	-8904	16539	multi-exon	FALSE	non_canonical	0	0	junction_1	0	890	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAATGAGGGGGGCTCAC	NA	False	NA	NA	False	NA	NA	NA	63861176	63835297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_63835372_63836134_63836221_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ENSMUSG00000108645.2_63835298_63861176_2	chr7	-	1818	10	Genic_Genomic	ENSMUSG00000108645.2	novel	436	1	NA	NA	-8904	16539	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1819	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAATGAGGGGGGCTCAC	NA	False	NA	NA	False	NA	NA	NA	63861176	63835297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_63835372_63847030_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ENSMUSG00000108688.2_121758730_121769098_1	chr7	-	2100	11	Genic_Genomic	ENSMUSG00000108688.2	novel	1016	1	NA	NA	-1831	7522	multi-exon	FALSE	non_canonical	0	0	junction_1	0	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGAGGGTCCTGCTCTGC	NA	False	NA	NA	False	NA	NA	NA	121769098	121758729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609_121768885_121768917
ENSMUSG00000108688.2_121758730_121769098_4	chr7	-	2103	11	Genic_Genomic	ENSMUSG00000108688.2	novel	1016	1	NA	NA	-1831	7522	multi-exon	TRUE	non_canonical	0	0	junction_1	0	712	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGAGGGTCCTGCTCTGC	NA	False	NA	NA	False	NA	NA	NA	121769098	121758729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609_121768878_121768907
ENSMUSG00000108720.2_128346667_128385511_1	chr7	-	3456	19	Genic_Genomic	ENSMUSG00000108720.2	novel	1098	1	NA	NA	-38511	-764	multi-exon	FALSE	non_canonical	0	0	junction_1	0	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCACTTCCGCACTTGCG	8140	False	NA	NA	False	NA	NA	NA	128385511	128346666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151
ENSMUSG00000108955.2_3508816_3517648_1	chr8	+	1127	5	Genic_Genomic	ENSMUSG00000108955.2	novel	1456	1	NA	NA	777	8154	multi-exon	FALSE	non_canonical	0	0	junction_1	0	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCCAGGGCGGGGTCAA	8276	False	NA	NA	False	NA	NA	NA	3508815	3517648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_3509435_3510271_3510335_3513921_3514101_3515782_3515972_3517571
ENSMUSG00000108955.2_3508816_3517648_2	chr8	+	938	4	Genic_Genomic	ENSMUSG00000108955.2	novel	1456	1	NA	NA	777	8154	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCCAGGGCGGGGTCAA	8276	False	NA	NA	False	NA	NA	NA	3508815	3517648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_3509435_3510271_3510335_3513921_3514101_3517571
ENSMUSG00000108979.2_118339970_118440712_1	chr7	-	3094	31	Genic_Genomic	ENSMUSG00000108979.2	novel	733	1	NA	NA	-100308	-298	multi-exon	FALSE	non_canonical	0	0	junction_1	0	763	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATCGCCTGTTTTCCGCG	7487	False	NA	NA	False	NA	NA	NA	118440712	118339969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374604_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ENSMUSG00000109032.2_75375898_75393963_1	chr9	+	2416	4	NIC	ENSMUSG00000109032.2	novel	505	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	3.2659863237109	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTATGTGTGTGCATT	NA	False	NA	16	True	AATAAA	-21	NA	75375897	75393963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_75375966_75388729_75388947_75390380_75390480_75391931
ENSMUSG00000109111.2_44608796_44624202_1	chr7	+	2721	19	NIC	ENSMUSG00000109111.2	novel	773	4	NA	NA	-11057	475	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCCCTGAACTGGGTGT	6158	False	NA	NA	False	NA	NA	NA	44608795	44624202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ENSMUSG00000109128.2_152506623_152524292_1	chrX	-	675	4	NNC	ENSMUSG00000109128.2	novel	545	3	NA	NA	-17415	-2470	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAGGCACGGGGCTGGC	NA	False	NA	NA	False	NA	NA	NA	152524292	152506622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chrX_-_152506826_152508700_152508838_152511857_152511936_152524035
ENSMUSG00000109168.2_28014316_28038171_1	chr7	+	3537	29	NNC	ENSMUSG00000109168.2	novel	448	2	NA	NA	-7	19873	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	2034	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGCCTGAGCGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	28014315	28038171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ENSMUSG00000109198.2_44545520_44550048_1	chr7	-	1483	10	Fusion	ENSMUSG00000109198.2_ENSMUSG00000060279.15	novel	3376	23	NA	NA	1070	-1791	intron_retention	FALSE	non_canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGATTCTTTTTCCGCC	3880	False	NA	NA	False	NA	NA	NA	44550048	44545519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr7_-_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
ENSMUSG00000109274.2_5059855_5063784_1	chr7	-	1344	6	Fusion	ENSMUSG00000109274.2_ENSMUSG00000086604.3	novel	1172	4	NA	NA	1264	2421	multi-exon	FALSE	non_canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAGCGGCAGAGGAGGGGG	NA	False	NA	NA	False	NA	NA	NA	5063784	5059854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr7_-_5059967_5060497_5060659_5060797_5060903_5060990_5061168_5062494_5062705_5063205
ENSMUSG00000109324.3_44626188_44635756_1	chr7	-	1266	11	FSM	ENSMUSG00000109324.3	ENSMUST00000107843.11	1508	11	236	6	-7	0	multi-exon	FALSE	canonical	3	222	junction_9	1333.46760365597	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCCACTTCTCGCCCT	NA	False	NA	-36	True	AATAAA	-11	NA	44635756	44626187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633503_44633558_44635706
ENSMUSG00000109324.3_44626188_44635756_2	chr7	-	1212	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	160	775	-7	0	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	3512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCCACTTCTCGCCCT	NA	False	NA	-36	True	AATAAA	-11	NA	44635756	44626187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ENSMUSG00000109324.3_44626188_44635858_1	chr7	-	1314	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	58	775	0	0	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	3774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCCACTTCTCGCCCT	NA	False	NA	-36	True	AATAAA	-11	NA	44635858	44626187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ENSMUSG00000109324.3_44626324_44635756_1	chr7	-	1076	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	160	911	-7	0	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGCCAGGCTGGCCCT	NA	False	NA	NA	False	NA	NA	NA	44635756	44626323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ENSMUSG00000109350.2_19405511_19407689_1	chr7	-	577	4	NNC	ENSMUSG00000109350.2	novel	587	4	NA	NA	7646	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2.49443825784929	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGGCGTCGTGTGGCTTC	7347	False	NA	NA	False	AATAAA	-13	NA	19407689	19405510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_-_19405774_19407153_19407305_19407471_19407587_19407641
ENSMUSG00000109398.3_6346758_6358611_1	chr7	+	2606	5	FSM	ENSMUSG00000109398.3	ENSMUST00000207173.3	2950	5	0	344	0	-344	multi-exon	FALSE	canonical	3	12	junction_1	2.6809513236909	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTTTGTGTGTGTG	3012	False	NA	7	True	ATTAAA	-15	NA	6346757	6358611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_6346862_6349343_6349432_6351435_6351563_6352716_6352813_6356420
ENSMUSG00000109445.2_119701618_119720209_1	chr7	-	1442	5	Genic_Genomic	ENSMUSG00000109445.2	novel	1595	1	NA	NA	-17781	-784	multi-exon	TRUE	non_canonical	0	0	junction_1	0	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAAGCGCTCTTCCTCTA	563	False	NA	NA	False	NA	NA	NA	119720209	119701617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_119701739_119703852_119704053_119714608_119714778_119715442_119715582_119719396
ENSMUSG00000109445.2_119701713_119720209_1	chr7	-	1347	5	Genic_Genomic	ENSMUSG00000109445.2	novel	1595	1	NA	NA	-17781	-879	multi-exon	FALSE	non_canonical	0	0	junction_1	0	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCAGCCACAGAGGGCG	563	False	NA	NA	False	NA	NA	NA	119720209	119701712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_119701739_119703852_119704053_119714608_119714778_119715442_119715582_119719396
ENSMUSG00000109455.2_28086161_28092133_1	chr7	+	796	5	Genic_Genomic	ENSMUSG00000109455.2	novel	471	2	NA	NA	7756	194	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTAGCTCCTCAGCTTTT	742	False	NA	NA	False	CATAAA	-11	NA	28086160	28092133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_28086450_28086623_28086729_28090236_28090322_28090514_28090574_28091875
ENSMUSG00000109482.3_72622776_72640834_1	chr12	-	381	3	NNC	ENSMUSG00000109482.3	novel	873	6	NA	NA	15032	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	1	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAAGTAGTAGGGTTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	72640834	72622775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_72622893_72624511_72624657_72640715
ENSMUSG00000109511.2_44465617_44480233_1	chr7	+	2614	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	105	3	105	0	multi-exon	FALSE	canonical	3	986	junction_1	0	2512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCTGTGAGTATGGG	180	False	NA	18	True	AATAAA	-18	NA	44465616	44480233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44465908_44477910
ENSMUSG00000109511.2_44465724_44480233_1	chr7	+	1683	3	NNC	ENSMUSG00000109511.2	novel	2722	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	493	586	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCTGTGAGTATGGG	287	False	NA	18	True	AATAAA	-18	NA	44465723	44480233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_44465908_44477910_44477959_44478782
ENSMUSG00000109511.2_44465724_44480233_2	chr7	+	2507	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	212	3	0	0	multi-exon	FALSE	canonical	3	986	junction_1	0	2481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCTGTGAGTATGGG	287	False	NA	18	True	AATAAA	-18	NA	44465723	44480233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44465908_44477910
ENSMUSG00000109511.2_44465820_44480233_1	chr7	+	1587	3	NNC	ENSMUSG00000109511.2	novel	2722	2	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	493	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCTGTGAGTATGGG	383	False	NA	18	True	AATAAA	-18	NA	44465819	44480233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr7_+_44465908_44477910_44477959_44478782
ENSMUSG00000109511.2_44465820_44480233_2	chr7	+	2411	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	308	3	13	0	multi-exon	FALSE	canonical	3	986	junction_1	0	1825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCTGTGAGTATGGG	383	False	NA	18	True	AATAAA	-18	NA	44465819	44480233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44465908_44477910
ENSMUSG00000109556.2_82780750_82783107_1	chr6	-	304	3	NNC	ENSMUSG00000109556.2	novel	323	3	NA	NA	-1043	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	4	76	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	-3	True	NA	NA	NA	82783107	82780749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr6_-_82780876_82781189_82781307_82783046
ENSMUSG00000109704.2_36623164_36627753_1	chr8	+	480	4	NNC	ENSMUSG00000109704.2	novel	1488	4	NA	NA	0	-435	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGTTCGCCATCT	NA	False	NA	NA	False	NA	NA	NA	36623163	36627753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_36623247_36623480_36623563_36626900_36627001_36627538
ENSMUSG00000109715.2_75422964_75464709_1	chr11	-	3432	14	Genic_Genomic	ENSMUSG00000109715.2	novel	2795	1	NA	NA	-40812	-1861	multi-exon	FALSE	non_canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCCTTCAACCACAAAAT	6066	False	NA	NA	False	NA	NA	NA	75464709	75422963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_-_75423241_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ENSMUSG00000109771.2_110228200_110242316_1	chr5	-	458	3	ISM	ENSMUSG00000109771.2	ENSMUST00000210052.2	3523	4	-30	4198	-30	-1060	5prime_fragment	FALSE	canonical	3	35	junction_2	13	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGGTGTCTGAATTGTG	NA	False	NA	NA	False	NA	NA	NA	110242316	110228199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr5_-_110228411_110228603_110228731_110242196
ENSMUSG00000109772.2_11919999_11944289_1	chr8	+	725	3	NNC	ENSMUSG00000109772.2	novel	429	2	NA	NA	-4160	176	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1.5	486	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTCTTGATTTCTT	6869	False	NA	NA	False	NA	NA	NA	11919998	11944289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_+_11920098_11924137_11924331_11943856
ENSMUSG00000109865.2_3489887_3513794_2	chr2	-	1743	14	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	281.012876371156	3044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGAGTCTTTGTTTTCTT	3999	False	NA	-5	True	ATTAAA	-20	NA	3513794	3489886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512205_3512292_3513670
ENSMUSG00000109865.2_3489887_3513794_3	chr2	-	1730	14	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	283.053259880529	3039	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGAGTCTTTGTTTTCTT	3999	False	NA	-5	True	ATTAAA	-20	NA	3513794	3489886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503815_3512051_3512135_3512210_3512292_3513670
ENSMUSG00000109865.2_3489887_3513794_4	chr2	-	1732	14	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	283.331177622615	3039	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGAGTCTTTGTTTTCTT	3999	False	NA	-5	True	ATTAAA	-20	NA	3513794	3489886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502170_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ENSMUSG00000109865.2_3496879_3513796_1	chr2	-	1681	9	ISM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	55	6992	-16	130	5prime_fragment	FALSE	canonical	3	947	junction_4	44.2081369772579	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTAGTTGTTTCCCCGCC	3997	False	NA	NA	False	NA	NA	NA	3513796	3496878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr2_-_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ENSMUSG00000109946.2_27332515_27334233_1	chr2	+	1606	2	NNC	ENSMUSG00000109946.2	novel	509	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTTCTCATTTTTCTT	NA	False	NA	3	True	AATAAA	-15	NA	27332514	27334233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr2_+_27332827_27332939
ENSMUSG00000109947.2_44732337_44741621_1	chr7	+	1374	7	NIC	ENSMUSG00000109947.2	novel	459	2	NA	NA	-8496	-6123	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	513	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGCTGCCGCCCTCTGAC	NA	False	NA	NA	False	NA	NA	NA	44732336	44741621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_+_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741583
ENSMUSG00000109975.2_21593308_21604688_1	chr12	+	625	5	NNC	ENSMUSG00000109975.2	novel	363	4	NA	NA	0	166	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	52.9952828089444	663	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTTCTGTCTTAGTTA	6100	False	NA	NA	False	ATTAAA	-18	NA	21593307	21604688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_21593347_21595309_21595401_21599867_21599956_21604011_21604108_21604377
ENSMUSG00000110013.2_52809646_52812641_1	chr8	+	1163	2	ISM	ENSMUSG00000110013.2	ENSMUST00000210977.2	763	4	0	43733	0	-43733	5prime_fragment	FALSE	canonical	3	54	junction_1	0	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTTTTTGGCCCCC	NA	False	NA	7	True	NA	NA	NA	52809645	52812641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_52809842_52811674
ENSMUSG00000110013.2_52809646_52813549_1	chr8	+	2071	2	ISM	ENSMUSG00000110013.2	ENSMUST00000210977.2	763	4	0	42825	0	-42825	5prime_fragment	FALSE	canonical	3	54	junction_1	0	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTTGCATCTTTCCTG	NA	False	NA	21	True	NA	NA	NA	52809645	52813549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_52809842_52811674
ENSMUSG00000110013.2_52809646_52813735_1	chr8	+	2257	2	ISM	ENSMUSG00000110013.2	ENSMUST00000210977.2	763	4	0	42639	0	-42639	5prime_fragment	FALSE	canonical	3	54	junction_1	0	429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGTTTCTCGTGAGTGAT	NA	False	NA	23	True	NA	NA	NA	52809645	52813735	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_52809842_52811674
ENSMUSG00000110138.2_92040186_92393953_1	chr8	-	2417	9	Genic_Genomic	ENSMUSG00000110138.2	novel	2929	4	NA	NA	-192727	135963	multi-exon	FALSE	non_canonical	0	0	junction_1	0	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCCACCGTGGGCCGTGT	NA	False	NA	NA	False	ACTAAA	-7	NA	92393953	92040185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ENSMUSG00000110138.2_92040186_92395067_1	chr8	-	3531	9	Genic_Genomic	ENSMUSG00000110138.2	novel	2929	4	NA	NA	-193841	135963	multi-exon	FALSE	non_canonical	0	0	junction_1	0	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCCACCGTGGGCCGTGT	NA	False	NA	NA	False	ACTAAA	-7	NA	92395067	92040185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ENSMUSG00000110256.2_23731362_23747082_1	chr8	+	1997	5	Genic_Genomic	ENSMUSG00000110256.2	novel	2275	1	NA	NA	-15289	-1843	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1739	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGTCCTGTCGCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23731361	23747082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689
ENSMUSG00000110279.2_44771803_44773796_1	chr7	+	589	5	Genic_Genomic	ENSMUSG00000110279.2	novel	778	3	NA	NA	462	228	multi-exon	FALSE	non_canonical	0	0	junction_1	0	56950	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCGGGGCGGAAGTGAC	NA	False	NA	NA	False	NA	NA	NA	44771802	44773796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44771983_44772252_44772383_44772591_44772663_44772842_44772975_44773720
ENSMUSG00000110279.2_44771803_44773796_2	chr7	+	602	5	Genic_Genomic	ENSMUSG00000110279.2	novel	778	3	NA	NA	462	228	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCGGGGCGGAAGTGAC	NA	False	NA	NA	False	NA	NA	NA	44771802	44773796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44771983_44772252_44772383_44772586_44772663_44772842_44772975_44773712
ENSMUSG00000110279.2_44771803_44773796_3	chr7	+	466	5	Genic_Genomic	ENSMUSG00000110279.2	novel	778	3	NA	NA	462	228	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2081	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCGGGGCGGAAGTGAC	NA	False	NA	NA	False	NA	NA	NA	44771802	44773796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44771895_44772292_44772383_44772586_44772663_44772842_44772975_44773720
ENSMUSG00000110279.2_44771803_44773796_4	chr7	+	446	5	Genic_Genomic	ENSMUSG00000110279.2	novel	778	3	NA	NA	462	228	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1982	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCGGGGCGGAAGTGAC	NA	False	NA	NA	False	NA	NA	NA	44771802	44773796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44771895_44772312_44772383_44772586_44772663_44772842_44772975_44773720
ENSMUSG00000110279.2_44771803_44773796_5	chr7	+	580	5	Genic_Genomic	ENSMUSG00000110279.2	novel	778	3	NA	NA	462	228	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13170	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCGGGGCGGAAGTGAC	NA	False	NA	NA	False	NA	NA	NA	44771802	44773796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44771983_44772252_44772369_44772586_44772663_44772842_44772975_44773720
ENSMUSG00000110279.2_44771803_44773796_6	chr7	+	584	5	Genic_Genomic	ENSMUSG00000110279.2	novel	778	3	NA	NA	462	228	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCGGGGCGGAAGTGAC	NA	False	NA	NA	False	NA	NA	NA	44771802	44773796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44771973_44772252_44772383_44772586_44772663_44772842_44772975_44773720
ENSMUSG00000110279.2_44771803_44773796_7	chr7	+	579	5	Genic_Genomic	ENSMUSG00000110279.2	novel	778	3	NA	NA	462	228	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7426	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCGGGGCGGAAGTGAC	NA	False	NA	NA	False	NA	NA	NA	44771802	44773796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44771983_44772252_44772383_44772601_44772663_44772842_44772975_44773720
ENSMUSG00000110279.2_44771803_44773796_8	chr7	+	587	5	Genic_Genomic	ENSMUSG00000110279.2	novel	778	3	NA	NA	462	228	multi-exon	FALSE	non_canonical	0	0	junction_1	0	70708	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCGGGGCGGAAGTGAC	NA	False	NA	NA	False	NA	NA	NA	44771802	44773796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44771983_44772259_44772383_44772586_44772663_44772842_44772975_44773720
ENSMUSG00000110279.2_44771803_44773906_1	chr7	+	699	5	Genic_Genomic	ENSMUSG00000110279.2	novel	778	3	NA	NA	462	338	multi-exon	FALSE	non_canonical	0	0	junction_1	0	70456	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGCGGGAAGATCCTAT	NA	False	NA	NA	False	NA	NA	NA	44771802	44773906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44771983_44772252_44772383_44772591_44772663_44772842_44772975_44773720
ENSMUSG00000110279.2_44771803_44773906_2	chr7	+	697	5	Genic_Genomic	ENSMUSG00000110279.2	novel	778	3	NA	NA	462	338	multi-exon	FALSE	non_canonical	0	0	junction_1	0	83420	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGCGGGAAGATCCTAT	NA	False	NA	NA	False	NA	NA	NA	44771802	44773906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44771983_44772259_44772383_44772586_44772663_44772842_44772975_44773720
ENSMUSG00000110279.2_44771857_44773759_1	chr7	+	498	5	Genic_Genomic	ENSMUSG00000110279.2	novel	778	3	NA	NA	516	191	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1434	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCAGGGCCGCTCCCGGC	NA	False	NA	NA	False	NA	NA	NA	44771856	44773759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44771983_44772252_44772383_44772591_44772663_44772842_44772975_44773720
ENSMUSG00000110279.2_44771857_44773759_2	chr7	+	489	5	Genic_Genomic	ENSMUSG00000110279.2	novel	778	3	NA	NA	516	191	multi-exon	FALSE	non_canonical	0	0	junction_1	0	561	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCAGGGCCGCTCCCGGC	NA	False	NA	NA	False	NA	NA	NA	44771856	44773759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44771983_44772252_44772369_44772586_44772663_44772842_44772975_44773720
ENSMUSG00000110279.2_44771857_44773759_3	chr7	+	496	5	Genic_Genomic	ENSMUSG00000110279.2	novel	778	3	NA	NA	516	191	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1840	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCAGGGCCGCTCCCGGC	NA	False	NA	NA	False	NA	NA	NA	44771856	44773759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44771983_44772259_44772383_44772586_44772663_44772842_44772975_44773720
ENSMUSG00000110279.2_44771857_44773759_4	chr7	+	375	5	Genic_Genomic	ENSMUSG00000110279.2	novel	778	3	NA	NA	516	191	multi-exon	FALSE	non_canonical	0	0	junction_1	0	265	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCAGGGCCGCTCCCGGC	NA	False	NA	NA	False	NA	NA	NA	44771856	44773759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_44771895_44772292_44772383_44772586_44772663_44772842_44772975_44773720
ENSMUSG00000110350.2_45096050_45109263_1	chr7	+	939	5	Genic_Genomic	ENSMUSG00000110350.2	novel	832	1	NA	NA	-12843	-461	multi-exon	FALSE	non_canonical	0	0	junction_1	0	164977	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCGGGCAAGGAGCGC	NA	False	NA	NA	False	NA	NA	NA	45096049	45109263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_45096066_45107367_45107708_45107958_45108085_45108507_45108655_45108953
ENSMUSG00000110350.2_45107368_45109263_1	chr7	+	904	4	Genic_Genomic	ENSMUSG00000110350.2	novel	832	1	NA	NA	-1525	-461	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10387	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCGGGCAAGGAGCGC	NA	False	NA	NA	False	NA	NA	NA	45107367	45109263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_45107708_45107958_45108085_45108507_45108636_45108953
ENSMUSG00000110350.2_45107368_45109263_10	chr7	+	349	2	Genic_Genomic	ENSMUSG00000110350.2	novel	832	1	NA	NA	-1525	-461	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1553	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCGGGCAAGGAGCGC	NA	False	NA	NA	False	NA	NA	NA	45107367	45109263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_45107412_45108958
ENSMUSG00000110350.2_45107368_45109263_11	chr7	+	915	4	Genic_Genomic	ENSMUSG00000110350.2	novel	832	1	NA	NA	-1525	-461	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29808	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCGGGCAAGGAGCGC	NA	False	NA	NA	False	NA	NA	NA	45107367	45109263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_45107708_45107958_45108085_45108507_45108655_45108961
ENSMUSG00000110350.2_45107368_45109263_12	chr7	+	881	5	Genic_Genomic	ENSMUSG00000110350.2	novel	832	1	NA	NA	-1525	-461	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCGGGCAAGGAGCGC	NA	False	NA	NA	False	NA	NA	NA	45107367	45109263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_45107708_45107958_45108085_45108507_45108553_45108594_45108655_45108953
ENSMUSG00000110350.2_45107368_45109263_2	chr7	+	907	4	Genic_Genomic	ENSMUSG00000110350.2	novel	832	1	NA	NA	-1525	-461	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10963	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCGGGCAAGGAGCGC	NA	False	NA	NA	False	NA	NA	NA	45107367	45109263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_45107708_45107958_45108085_45108507_45108655_45108969
ENSMUSG00000110350.2_45107368_45109263_3	chr7	+	910	4	Genic_Genomic	ENSMUSG00000110350.2	novel	832	1	NA	NA	-1525	-461	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30416	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCGGGCAAGGAGCGC	NA	False	NA	NA	False	NA	NA	NA	45107367	45109263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_45107708_45107958_45108085_45108507_45108642_45108953
ENSMUSG00000110350.2_45107368_45109263_4	chr7	+	887	4	Genic_Genomic	ENSMUSG00000110350.2	novel	832	1	NA	NA	-1525	-461	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5441	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCGGGCAAGGAGCGC	NA	False	NA	NA	False	NA	NA	NA	45107367	45109263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_45107708_45107958_45108085_45108507_45108619_45108953
ENSMUSG00000110350.2_45107368_45109263_5	chr7	+	900	4	Genic_Genomic	ENSMUSG00000110350.2	novel	832	1	NA	NA	-1525	-461	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11248	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCGGGCAAGGAGCGC	NA	False	NA	NA	False	NA	NA	NA	45107367	45109263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_45107708_45107981_45108085_45108507_45108655_45108953
ENSMUSG00000110350.2_45107368_45109263_6	chr7	+	910	4	Genic_Genomic	ENSMUSG00000110350.2	novel	832	1	NA	NA	-1525	-461	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19666	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCGGGCAAGGAGCGC	NA	False	NA	NA	False	NA	NA	NA	45107367	45109263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_45107708_45107958_45108072_45108507_45108655_45108953
ENSMUSG00000110350.2_45107368_45109263_7	chr7	+	918	4	Genic_Genomic	ENSMUSG00000110350.2	novel	832	1	NA	NA	-1525	-461	multi-exon	FALSE	non_canonical	0	0	junction_1	0	82398	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCGGGCAAGGAGCGC	NA	False	NA	NA	False	NA	NA	NA	45107367	45109263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_45107708_45107958_45108085_45108507_45108655_45108958
ENSMUSG00000110350.2_45107368_45109263_8	chr7	+	944	4	Genic_Genomic	ENSMUSG00000110350.2	novel	832	1	NA	NA	-1525	-461	multi-exon	FALSE	non_canonical	0	0	junction_1	0	47973	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCGGGCAAGGAGCGC	NA	False	NA	NA	False	NA	NA	NA	45107367	45109263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_45107708_45107958_45108106_45108507_45108655_45108953
ENSMUSG00000110350.2_45107368_45109263_9	chr7	+	900	4	Genic_Genomic	ENSMUSG00000110350.2	novel	832	1	NA	NA	-1525	-461	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5939	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCGGGCAAGGAGCGC	NA	False	NA	NA	False	NA	NA	NA	45107367	45109263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_45107708_45107958_45108085_45108530_45108655_45108953
ENSMUSG00000110350.2_45107513_45109263_1	chr7	+	773	4	Genic_Genomic	ENSMUSG00000110350.2	novel	832	1	NA	NA	-1380	-461	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1071	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCGGGCAAGGAGCGC	NA	False	NA	NA	False	NA	NA	NA	45107512	45109263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_+_45107708_45107958_45108085_45108507_45108655_45108958
ENSMUSG00000110357.2_45285769_45288517_1	chr7	-	967	4	NIC	ENSMUSG00000110357.2	novel	1542	2	NA	NA	-328	-665	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTCTGGGGGAGGAAA	9694	False	NA	NA	False	NA	NA	NA	45288517	45285768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr7_-_45286006_45286143_45286317_45287293_45287442_45288108
ENSMUSG00000110378.2_65399906_65421685_1	chr8	-	1053	6	Genic_Genomic	ENSMUSG00000110378.2	novel	2129	1	NA	NA	-21315	-1664	multi-exon	FALSE	non_canonical	0	0	junction_1	0	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGCCGACGGCCCGGGAC	NA	False	NA	NA	False	NA	NA	NA	65421685	65399905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
ENSMUSG00000110419.2_57976862_58106069_2	chr8	+	4317	12	NIC	ENSMUSG00000110419.2	novel	1446	3	NA	NA	-127929	-9513	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCTTCCCCCTCCCCC	NA	False	NA	NA	False	NA	NA	NA	57976861	58106069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ENSMUSG00000110444.3_69823693_69848191_1	chr8	-	3154	4	FSM	ENSMUSG00000110444.3	ENSMUST00000072427.7	7668	4	-17	4531	0	1104	multi-exon	FALSE	canonical	3	36	junction_3	3.85861230093008	1042	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCGTTCACTTCCTAAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	69848191	69823692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69848092
ENSMUSG00000110457.3_106700145_106706070_1	chr8	+	1707	10	NIC	ENSMUSG00000110457.3	novel	3186	3	NA	NA	416	-4555	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTTCCACTCCTACAA	NA	False	NA	NA	False	NA	NA	NA	106700144	106706070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_+_106700484_106701326_106701463_106701813_106701890_106702751_106702837_106703892_106704070_106704191_106704262_106704531_106704674_106704773_106704904_106705343_106705471_106705645
ENSMUSG00000110489.2_96535180_96544326_1	chr8	-	321	3	FSM	ENSMUSG00000110489.2	ENSMUST00000212957.2	153	3	-7	-161	-7	0	multi-exon	FALSE	canonical	3	213	junction_1	80.5	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAATAGTACTGGTATG	NA	False	NA	-4	True	TTTAAA	-1	NA	96544326	96535179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_96535388_96539088_96539129_96544253
ENSMUSG00000110588.2_94899292_94900196_1	chr8	-	502	3	Genic_Genomic	ENSMUSG00000110588.2	novel	2665	1	NA	NA	-156	-1916	multi-exon	FALSE	non_canonical	0	0	junction_1	0	106497	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAAGGGATATGGCCAGC	NA	False	NA	NA	False	NA	NA	NA	94900196	94899291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_94899495_94899754_94899821_94899963
ENSMUSG00000110588.2_94899292_94900196_2	chr8	-	493	3	Genic_Genomic	ENSMUSG00000110588.2	novel	2665	1	NA	NA	-156	-1916	multi-exon	FALSE	non_canonical	0	0	junction_1	0	70867	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAAGGGATATGGCCAGC	NA	False	NA	NA	False	NA	NA	NA	94900196	94899291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_94899504_94899754_94899803_94899963
ENSMUSG00000110588.2_94899488_94900196_1	chr8	-	236	3	Genic_Genomic	ENSMUSG00000110588.2	novel	2665	1	NA	NA	-156	-2112	multi-exon	FALSE	non_canonical	0	0	junction_1	0	622	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGTCCATGGCGAGTG	NA	False	NA	NA	False	NA	NA	NA	94900196	94899487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_94899504_94899754_94899821_94900042
ENSMUSG00000110588.2_94899488_94900196_10	chr8	-	297	3	Genic_Genomic	ENSMUSG00000110588.2	novel	2665	1	NA	NA	-156	-2112	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1365	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGTCCATGGCGAGTG	NA	False	NA	NA	False	NA	NA	NA	94900196	94899487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_94899504_94899754_94899803_94899963
ENSMUSG00000110588.2_94899488_94900196_12	chr8	-	566	2	Genic_Genomic	ENSMUSG00000110588.2	novel	2665	1	NA	NA	-156	-2112	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2607	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGTCCATGGCGAGTG	NA	False	NA	NA	False	NA	NA	NA	94900196	94899487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_94899821_94899963
ENSMUSG00000110588.2_94899488_94900196_13	chr8	-	285	2	Genic_Genomic	ENSMUSG00000110588.2	novel	2665	1	NA	NA	-156	-2112	multi-exon	FALSE	non_canonical	0	0	junction_1	0	985	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGTCCATGGCGAGTG	NA	False	NA	NA	False	NA	NA	NA	94900196	94899487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_94899504_94899927
ENSMUSG00000110588.2_94899488_94900196_14	chr8	-	291	3	Genic_Genomic	ENSMUSG00000110588.2	novel	2665	1	NA	NA	-156	-2112	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2006	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGTCCATGGCGAGTG	NA	False	NA	NA	False	NA	NA	NA	94900196	94899487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_94899495_94899769_94899821_94899963
ENSMUSG00000110588.2_94899488_94900196_2	chr8	-	306	3	Genic_Genomic	ENSMUSG00000110588.2	novel	2665	1	NA	NA	-156	-2112	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2037	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGTCCATGGCGAGTG	NA	False	NA	NA	False	NA	NA	NA	94900196	94899487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_94899495_94899754_94899821_94899963
ENSMUSG00000110588.2_94899488_94900196_3	chr8	-	279	4	Genic_Genomic	ENSMUSG00000110588.2	novel	2665	1	NA	NA	-156	-2112	multi-exon	FALSE	non_canonical	0	0	junction_1	0	921	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGTCCATGGCGAGTG	NA	False	NA	NA	False	NA	NA	NA	94900196	94899487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_94899504_94899754_94899821_94899963_94900025_94900060
ENSMUSG00000110588.2_94899488_94900196_4	chr8	-	280	3	Genic_Genomic	ENSMUSG00000110588.2	novel	2665	1	NA	NA	-156	-2112	multi-exon	FALSE	non_canonical	0	0	junction_1	0	894	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGTCCATGGCGAGTG	NA	False	NA	NA	False	NA	NA	NA	94900196	94899487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_94899504_94899754_94899821_94899998
ENSMUSG00000110588.2_94899488_94900196_5	chr8	-	271	3	Genic_Genomic	ENSMUSG00000110588.2	novel	2665	1	NA	NA	-156	-2112	multi-exon	FALSE	non_canonical	0	0	junction_1	0	748	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGTCCATGGCGAGTG	NA	False	NA	NA	False	NA	NA	NA	94900196	94899487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_94899504_94899754_94899821_94900007
ENSMUSG00000110588.2_94899488_94900196_6	chr8	-	273	4	Genic_Genomic	ENSMUSG00000110588.2	novel	2665	1	NA	NA	-156	-2112	multi-exon	FALSE	non_canonical	0	0	junction_1	0	635	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGTCCATGGCGAGTG	NA	False	NA	NA	False	NA	NA	NA	94900196	94899487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_94899504_94899754_94899821_94899963_94900026_94900067
ENSMUSG00000110588.2_94899488_94900196_7	chr8	-	303	3	Genic_Genomic	ENSMUSG00000110588.2	novel	2665	1	NA	NA	-156	-2112	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2854	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGTCCATGGCGAGTG	NA	False	NA	NA	False	NA	NA	NA	94900196	94899487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_94899504_94899754_94899821_94899975
ENSMUSG00000110588.2_94899488_94900196_8	chr8	-	279	3	Genic_Genomic	ENSMUSG00000110588.2	novel	2665	1	NA	NA	-156	-2112	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1390	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGTCCATGGCGAGTG	NA	False	NA	NA	False	NA	NA	NA	94900196	94899487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_-_94899495_94899781_94899821_94899963
ENSMUSG00000110593.2_75720307_75757320_1	chr8	-	2703	12	NIC	ENSMUSG00000110593.2	novel	259	2	NA	NA	3249	30418	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGCAACAAGGGCGCCTC	NA	False	NA	NA	False	NA	NA	NA	75757320	75720306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ENSMUSG00000110593.2_75720307_75757320_2	chr8	-	2599	11	NIC	ENSMUSG00000110593.2	novel	259	2	NA	NA	3249	30418	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGCAACAAGGGCGCCTC	NA	False	NA	NA	False	NA	NA	NA	75757320	75720306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_75720378_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ENSMUSG00000110593.2_75720307_75758606_1	chr8	-	3885	11	NIC	ENSMUSG00000110593.2	novel	259	2	NA	NA	1963	30418	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	442	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGCAACAAGGGCGCCTC	NA	False	NA	NA	False	NA	NA	NA	75758606	75720306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_75720378_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ENSMUSG00000110593.2_75742850_75757320_1	chr8	-	1435	7	NIC	ENSMUSG00000110593.2	novel	259	2	NA	NA	3249	7875	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATGCCTTTACAGACGT	NA	False	NA	NA	False	NA	NA	NA	75757320	75742849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_75743035_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ENSMUSG00000110593.2_75742850_75758542_1	chr8	-	2657	7	NIC	ENSMUSG00000110593.2	novel	259	2	NA	NA	2027	7875	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATGCCTTTACAGACGT	NA	False	NA	NA	False	NA	NA	NA	75758542	75742849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr8_-_75743035_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ENSMUSG00000110594.2_69423797_69480246_1	chr8	-	568	3	NNC	ENSMUSG00000110594.2	novel	527	2	NA	NA	-25911	0	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_2	3.5	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATATCCTCTGACATGAT	NA	False	NA	NA	False	NA	NA	NA	69480246	69423796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr8_-_69424161_69454172_69454288_69480157
ENSMUSG00000110605.2_129990122_129994049_1	chr8	+	168	2	ISM	ENSMUSG00000110605.2	ENSMUST00000212145.2	3767	3	-7	4300	0	-4300	5prime_fragment	FALSE	canonical	3	11	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTCTCTCATGATTCTT	NA	False	NA	NA	False	NA	NA	NA	129990121	129994049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr8_+_129990206_129993965
ENSMUSG00000110615.2_124626039_124675994_1	chr8	+	3621	26	Fusion	ENSMUSG00000110615.2_ENSMUSG00000110547.2	novel	1895	2	NA	NA	3027	-3530	multi-exon	FALSE	non_canonical	0	0	junction_1	0	685	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGGGAAGGCGCCTAGAG	NA	False	NA	NA	False	NA	NA	NA	124626038	124675994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr8_+_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ENSMUSG00000110630.2_105145569_105169445_1	chr8	+	3136	13	Genic_Genomic	ENSMUSG00000110630.2	novel	1516	1	NA	NA	-23334	-973	multi-exon	FALSE	non_canonical	0	0	junction_1	0	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACAAAGAGGGCCCTCC	NA	False	NA	NA	False	NA	NA	NA	105145568	105169445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ENSMUSG00000110630.2_105147139_105169445_1	chr8	+	1566	13	Genic_Genomic	ENSMUSG00000110630.2	novel	1516	1	NA	NA	-21764	-973	multi-exon	FALSE	non_canonical	0	0	junction_1	0	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACAAAGAGGGCCCTCC	NA	False	NA	NA	False	NA	NA	NA	105147138	105169445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ENSMUSG00000110711.2_96590762_96615020_1	chr8	+	2370	10	Genic_Genomic	ENSMUSG00000110711.2	novel	1782	1	NA	NA	-6680	15797	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1361	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACAGTGACTTCCCTGG	NA	False	NA	NA	False	NA	NA	NA	96590761	96615020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_96591880_96593448_96593600_96596099_96596261_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000110711.2_96590762_96615020_2	chr8	+	2369	10	Genic_Genomic	ENSMUSG00000110711.2	novel	1782	1	NA	NA	-6680	15797	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1279	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACAGTGACTTCCCTGG	NA	False	NA	NA	False	NA	NA	NA	96590761	96615020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598524_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000110711.2_96590762_96615020_3	chr8	+	2367	10	Genic_Genomic	ENSMUSG00000110711.2	novel	1782	1	NA	NA	-6680	15797	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1035	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACAGTGACTTCCCTGG	NA	False	NA	NA	False	NA	NA	NA	96590761	96615020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601039_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000110711.2_96590762_96615020_4	chr8	+	2370	10	Genic_Genomic	ENSMUSG00000110711.2	novel	1782	1	NA	NA	-6680	15797	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2206	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACAGTGACTTCCCTGG	NA	False	NA	NA	False	NA	NA	NA	96590761	96615020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_96591880_96593448_96593600_96596099_96596266_96597407_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000110711.2_96590762_96615020_5	chr8	+	2367	10	Genic_Genomic	ENSMUSG00000110711.2	novel	1782	1	NA	NA	-6680	15797	multi-exon	FALSE	non_canonical	0	0	junction_1	0	978	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACAGTGACTTCCCTGG	NA	False	NA	NA	False	NA	NA	NA	96590761	96615020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr8_+_96591880_96593448_96593592_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000110790.2_20930322_20940113_1	chr9	-	2311	6	NIC	ENSMUSG00000110790.2	novel	3485	2	NA	NA	3540	9281	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	876	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGAGGTCCTCCTTGC	1679	False	NA	NA	False	NA	NA	NA	20940113	20930321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938977_20939066
ENSMUSG00000110834.2_124031169_124044816_1	chr9	-	1698	4	NNC	ENSMUSG00000110834.2	novel	461	4	NA	NA	-47	1819	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	29.8477618740315	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	NNNNNNNNNNNNNNNNNNNN	NA	False	NA	NA	False	NA	NA	NA	124044816	124031168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_-_124032567_124033755_124033817_124033999_124034127_124044704
ENSMUSG00000110834.2_124033614_124034127_1	chr9	-	331	2	ISM	ENSMUSG00000110834.2	ENSMUST00000214845.2	461	4	10642	626	10642	-626	internal_fragment	FALSE	canonical	3	133	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAATGTCAGGTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	124034127	124033613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_124033817_124033999
ENSMUSG00000110899.2_44953994_44965313_1	chr9	-	2836	6	Genic_Genomic	ENSMUSG00000110899.2	novel	3921	1	NA	NA	1329	8728	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGGACTCCAGCACCCA	9039	False	NA	NA	False	NA	NA	NA	44965313	44953993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr9_-_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
ENSMUSG00000110949.2_4050580_4052103_1	chr19	+	654	3	NIC	ENSMUSG00000110949.2	novel	787	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	39.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGGCATCTTCCGTGT	3513	False	NA	9	True	ATTAAA	-18	NA	4050579	4052103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_4050848_4051627_4051706_4051795
ENSMUSG00000111147.2_60959649_60960257_1	chr9	+	287	2	NNC	ENSMUSG00000111147.2	novel	3468	7	NA	NA	20155	-6141	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGTGCACACAGCTC	NA	False	NA	NA	False	NA	NA	NA	60959648	60960257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_60959709_60960030
ENSMUSG00000111147.2_60959670_60966606_1	chr9	+	995	3	NNC	ENSMUSG00000111147.2	novel	3468	7	NA	NA	20176	208	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	2	902	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCATTTTTATCTTATG	NA	False	NA	NA	False	NA	NA	NA	60959669	60966606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_60959709_60960349_60960452_60965752
ENSMUSG00000111149.2_34106210_34109527_1	chr10	-	471	3	NNC	ENSMUSG00000111149.2	novel	378	3	NA	NA	0	693	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	27.5	426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTCGGTCTCTTTCT	NA	False	NA	-1	True	NA	NA	NA	34109527	34106209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_34106388_34106902_34107071_34109402
ENSMUSG00000111149.2_34106210_34109527_2	chr10	-	576	4	NNC	ENSMUSG00000111149.2	novel	378	3	NA	NA	0	693	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	34.5671648951558	775	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTCGGTCTCTTTCT	NA	False	NA	-1	True	NA	NA	NA	34109527	34106209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_34106388_34106902_34107071_34107314_34107420_34109402
ENSMUSG00000111149.2_34106210_34109577_1	chr10	-	491	3	NNC	ENSMUSG00000111149.2	novel	378	3	NA	NA	-50	693	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	46	345	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTCGGTCTCTTTCT	NA	False	NA	-1	True	NA	NA	NA	34109577	34106209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_34106388_34106902_34107041_34109402
ENSMUSG00000111390.2_27008907_27066689_1	chr9	+	1715	9	NIC	ENSMUSG00000111390.2	novel	3539	2	NA	NA	-940	53050	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGCGGAGAACCGGCCT	9190	False	NA	NA	False	GGGGCT	-6	NA	27008906	27066689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
ENSMUSG00000111390.2_27009132_27066689_1	chr9	+	1490	9	NIC	ENSMUSG00000111390.2	novel	3539	2	NA	NA	-715	53050	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGCGGAGAACCGGCCT	9415	False	NA	NA	False	GGGGCT	-6	NA	27009131	27066689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_+_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
ENSMUSG00000111423.2_78179280_78180328_1	chr9	+	538	3	NNC	ENSMUSG00000111423.2	novel	348	3	NA	NA	0	463	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1450	18088	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	3338	False	NA	NA	False	AATAAA	-24	NA	78179279	78180328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_78179399_78179483_78179660_78180085
ENSMUSG00000111423.2_78179280_78180328_2	chr9	+	542	3	NNC	ENSMUSG00000111423.2	novel	348	3	NA	NA	0	463	at_least_one_novel_splicesite	FALSE	canonical	3	2900	junction_2	19775.5	24937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	3338	False	NA	NA	False	AATAAA	-24	NA	78179279	78180328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_78179395_78179475_78179660_78180085
ENSMUSG00000111497.2_20978816_20984810_2	chr9	-	727	4	NIC	ENSMUSG00000079677.3	novel	812	5	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_3	142.14312036348	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGACATGTTTTGTGT	NA	False	NA	-7	True	AATAAA	-12	NA	20984810	20978815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr9_-_20979222_20979325_20979414_20984370_20984478_20984684
ENSMUSG00000111497.2_20985454_20990664_1	chr9	-	1802	5	ISM	ENSMUSG00000111497.2	ENSMUST00000217282.2	4234	12	1984	6638	1984	-6638	internal_fragment	FALSE	canonical	3	483	junction_3	27.9407856009812	403	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	20990664	20985453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504
ENSMUSG00000111497.2_20985568_21003295_1	chr9	-	3347	13	FSM	ENSMUSG00000010205.12	ENSMUST00000115487.3	3470	13	9	114	9	-114	multi-exon	FALSE	canonical	3	416	junction_7	41.8140725912541	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATAACCCAAACCCACTC	NA	False	NA	NA	False	GGGGCT	-45	NA	21003295	20985567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ENSMUSG00000111856.2_22038023_22046987_1	chr9	+	1493	6	NNC	ENSMUSG00000111856.2	novel	610	4	NA	NA	9055	-2065	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	439	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGCTCCAGAGTTCCT	NA	False	NA	NA	False	NA	NA	NA	22038022	22046987	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr9_+_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22045889_22046027_22046908
ENSMUSG00000111889.2_8363432_8391891_2	chr12	-	1026	7	Genic_Genomic	ENSMUSG00000111889.2	novel	773	2	NA	NA	-5174	22028	multi-exon	FALSE	non_canonical	0	0	junction_1	0	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGTCCTGGGCGTCGCTGC	NA	False	NA	NA	False	NA	NA	NA	8391891	8363431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr12_-_8363498_8367784_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ENSMUSG00000111889.2_8363432_8393824_1	chr12	-	3005	7	Genic_Genomic	ENSMUSG00000111889.2	novel	773	2	NA	NA	-7107	22028	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1016	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGTCCTGGGCGTCGCTGC	NA	False	NA	NA	False	NA	NA	NA	8393824	8363431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr12_-_8363498_8367784_8367997_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ENSMUSG00000111905.2_33872551_33895582_1	chr10	+	1052	7	Genic_Genomic	ENSMUSG00000111905.2	novel	1948	1	NA	NA	-22260	-1176	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1092	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCGGCTCCGCGGGCCG	NA	False	NA	NA	False	NA	NA	NA	33872550	33895582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr10_+_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33895361
ENSMUSG00000111905.2_33872551_33895620_1	chr10	+	991	8	Genic_Genomic	ENSMUSG00000111905.2	novel	1948	1	NA	NA	-22260	-1138	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1088	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGACTCATCGCGCCTGG	NA	False	NA	NA	False	NA	NA	NA	33872550	33895620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr10_+_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33895361_33895469_33895567
ENSMUSG00000112022.3_55188560_55201730_1	chr12	-	1233	8	FSM	ENSMUSG00000112022.3	ENSMUST00000219562.3	850	8	-49	-334	-49	334	multi-exon	FALSE	canonical	2	2	junction_7	67.4325059384779	5414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACAGCAAATATCTTGC	NA	False	NA	NA	False	AATAAA	-19	NA	55201730	55188559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_55189069_55190157_55190218_55192016_55192155_55195887_55196025_55196405_55196482_55196565_55196622_55197660_55197794_55201606
ENSMUSG00000112160.2_81919187_81958758_1	chr10	+	718	5	NNC	ENSMUSG00000112160.2	novel	2726	4	NA	NA	0	11708	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	9.08295106229247	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATTGTTTCCTTGCCTTC	NA	False	NA	8	True	NA	NA	NA	81919186	81958758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_81919247_81943643_81943771_81943972_81944034_81944572_81944605_81958320
ENSMUSG00000112188.2_95553156_95575225_1	chr10	+	463	3	NNC	ENSMUSG00000112188.2	novel	632	3	NA	NA	-12889	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTAGGTGTTTATTCA	NA	False	NA	NA	False	NA	NA	NA	95553155	95575225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_95553215_95570676_95570791_95574935
ENSMUSG00000112227.2_15667417_15682813_3	chr10	+	747	3	NNC	ENSMUSG00000112227.2	novel	628	3	NA	NA	-108	0	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_1	1	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACTAAAGATCAAGTATT	NA	False	NA	NA	False	NA	NA	NA	15667416	15682813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_15667792_15677163_15677341_15682618
ENSMUSG00000112227.2_15667525_15682813_2	chr10	+	639	3	NNC	ENSMUSG00000112227.2	novel	628	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	1	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACTAAAGATCAAGTATT	NA	False	NA	NA	False	NA	NA	NA	15667524	15682813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_15667792_15677163_15677341_15682618
ENSMUSG00000112294.2_122949133_123032900_2	chr10	+	3300	22	NNC	ENSMUSG00000112294.2	novel	625	3	NA	NA	-83467	-2423	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCCGCCGGCAGGTCTG	4407	False	NA	NA	False	NA	NA	NA	122949132	123032900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007125_123011743_123011879_123017577_123017706_123032731
ENSMUSG00000112400.2_95729305_95733232_1	chr10	+	966	3	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	0	113	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	59.5	647	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTTTGGAGGACCGAA	NA	False	NA	NA	False	NA	NA	NA	95729304	95733232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_95729523_95730062_95730152_95732573
ENSMUSG00000112400.2_95729305_95733737_1	chr10	+	1471	3	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	0	618	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	59.5	912	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAACTCAGAATATCAT	NA	False	NA	25	True	AATAAA	-18	NA	95729304	95733737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_95729523_95730062_95730152_95732573
ENSMUSG00000112400.2_95729418_95733232_1	chr10	+	764	2	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	113	113	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	176	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTTTGGAGGACCGAA	NA	False	NA	NA	False	NA	NA	NA	95729417	95733232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_95729523_95732573
ENSMUSG00000112428.2_88485834_88494140_1	chr10	-	1140	2	NNC	ENSMUSG00000112428.2	novel	960	2	NA	NA	-48	134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTAATAGGAGGGGCTT	9822	False	NA	NA	False	NA	NA	NA	88494140	88485833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_-_88486771_88493937
ENSMUSG00000112449.2_55201889_55235125_1	chr12	+	2413	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	0	1233	0	-1233	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	2486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCGTTAACTTTCTTTA	2354	False	NA	NA	False	AATAAA	-20	NA	55201888	55235125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
ENSMUSG00000112449.2_55202155_55213746_1	chr12	+	1066	4	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	266	22612	0	0	5prime_fragment	FALSE	canonical	3	808	junction_1	80.4335474510204	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTCTGTGTC	2620	False	NA	NA	False	AATAAA	-22	NA	55202154	55213746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093
ENSMUSG00000112449.2_55202155_55230334_1	chr12	+	1464	14	NNC	ENSMUSG00000112449.2	novel	3646	16	NA	NA	0	-162	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	256.274192103812	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTTCAGAACTGGAC	2620	False	NA	NA	False	AATGAA	-30	NA	55202154	55230334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230269
ENSMUSG00000112449.2_55202155_55235038_1	chr12	+	2060	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	266	1320	0	-1320	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTACATTTATAAACAGT	2620	False	NA	NA	False	TTTAAA	-26	NA	55202154	55235038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
ENSMUSG00000112449.2_55202155_55235125_1	chr12	+	2147	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	266	1233	0	-1233	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	2319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCGTTAACTTTCTTTA	2620	False	NA	NA	False	AATAAA	-20	NA	55202154	55235125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
ENSMUSG00000112654.2_21171917_21218622_1	chr10	-	1653	6	Genic_Genomic	ENSMUSG00000112654.2	novel	1018	4	NA	NA	-666	23070	multi-exon	FALSE	non_canonical	0	0	junction_1	0	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCCGAGCGTCCGCGCA	NA	False	NA	NA	False	NA	NA	NA	21218622	21171916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr10_-_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612
ENSMUSG00000112654.2_21171917_21244784_1	chr10	-	2750	18	Genic_Genomic	ENSMUSG00000112654.2	novel	1018	4	NA	NA	-26828	23070	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCCGAGCGTCCGCGCA	NA	False	NA	NA	False	NA	NA	NA	21244784	21171916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr10_-_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ENSMUSG00000112684.2_117977737_118004904_1	chr10	-	3076	14	NIC	ENSMUSG00000112684.2	novel	541	2	NA	NA	-3837	22153	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGACGACGCGCCGGCGCA	7048	False	NA	NA	False	NA	NA	NA	118004904	117977736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_-_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ENSMUSG00000112819.2_4602547_4603808_1	chr12	-	317	2	NIC	ENSMUSG00000112819.2	novel	457	3	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	0	3192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAACTGTCTTGGCTAC	NA	False	NA	NA	False	NA	NA	NA	4603808	4602546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_4602746_4603690
ENSMUSG00000113019.2_74656133_74670580_1	chr13	-	1979	4	FSM	ENSMUSG00000113019.2	ENSMUST00000220784.2	395	4	0	-1584	0	1584	multi-exon	FALSE	canonical	3	31	junction_3	21.249836600679	3357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	74670580	74656132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_74657816_74659212_74659274_74659474_74659602_74670472
ENSMUSG00000113047.2_74699445_74711993_1	chr13	-	3409	4	ISM	ENSMUSG00000113047.2	ENSMUST00000222092.2	704	5	382	-2774	0	2584	3prime_fragment	FALSE	canonical	3	33	junction_3	16.8720676464584	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTGACTCTCCAGTTA	NA	False	NA	-1	True	ATTAAA	-19	NA	74711993	74699444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_74702530_74703925_74703987_74704201_74704329_74711857
ENSMUSG00000113047.2_74699969_74711993_1	chr13	-	2885	4	ISM	ENSMUSG00000113047.2	ENSMUST00000222092.2	704	5	382	-2250	0	2060	3prime_fragment	FALSE	canonical	3	33	junction_3	16.8720676464584	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	74711993	74699968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_74702530_74703925_74703987_74704201_74704329_74711857
ENSMUSG00000113081.2_62403227_62421101_1	chr13	+	440	3	NNC	ENSMUSG00000113081.2	novel	1044	3	NA	NA	-8153	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	232	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATTGCAGGTATCTGAA	NA	False	NA	13	True	NA	NA	NA	62403226	62421101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_62403345_62420579_62420707_62420906
ENSMUSG00000113081.2_62403227_62423345_1	chr13	+	1521	4	NNC	ENSMUSG00000113081.2	novel	1044	3	NA	NA	-8153	278	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	203.201049866054	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGGCCCGTTGTTTAT	NA	False	NA	14	True	AATAAA	-16	NA	62403226	62423345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_62403345_62420579_62420707_62420906_62420968_62422130
ENSMUSG00000113081.2_62411380_62423345_1	chr13	+	1533	4	NNC	ENSMUSG00000113081.2	novel	452	3	NA	NA	0	278	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	193.294823750893	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGGCCCGTTGTTTAT	NA	False	NA	14	True	AATAAA	-16	NA	62411379	62423345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_62411510_62420579_62420707_62420906_62420968_62422130
ENSMUSG00000113087.2_88327324_88428488_1	chr12	-	2345	11	NIC	ENSMUSG00000113087.2	novel	402	2	NA	NA	-19464	73559	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGAAACAGTGCTTTCG	NA	False	NA	NA	False	NA	NA	NA	88428488	88327323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUSG00000113204.2_74727477_74739499_1	chr13	-	399	4	NIC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18654	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	25.3508711224421	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGAGAAACCTTATGAAT	NA	False	NA	NA	False	NA	NA	NA	74739499	74727476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_74727579_74728971_74729033_74729232_74729360_74739390
ENSMUSG00000113204.2_74753064_74765429_2	chr13	-	3313	5	FSM	ENSMUSG00000113204.2	ENSMUST00000222003.2	1371	5	250	-2192	0	0	multi-exon	FALSE	canonical	3	38	junction_3	23.1786539729985	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGATGTC	5218	False	NA	-5	True	NA	NA	NA	74765429	74753063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761068_74765320
ENSMUSG00000113204.2_74753064_74765429_3	chr13	-	3371	6	FSM	ENSMUSG00000113204.2	ENSMUST00000220929.2	1179	6	0	-2192	0	0	multi-exon	FALSE	canonical	3	7	junction_4	38.8453343401753	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGATGTC	5218	False	NA	-5	True	NA	NA	NA	74765429	74753063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759441_74760842_74761068_74765320
ENSMUSG00000113298.2_65012578_65027477_1	chr12	-	2638	4	NIC	ENSMUSG00000113298.2	novel	317	2	NA	NA	2233	14826	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGCCCCCGCTGAGCC	NA	False	NA	NA	False	NA	NA	NA	65027477	65012577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_65014803_65023468_65023626_65024942_65025078_65027356
ENSMUSG00000113311.2_74547813_74556113_1	chr13	-	1940	4	Genic_Genomic	ENSMUSG00000113311.2	novel	661	2	NA	NA	-1257	4489	multi-exon	FALSE	non_canonical	0	0	junction_1	0	143286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTTGCCCGCGAGGCT	7739	False	NA	NA	False	NA	NA	NA	74556113	74547812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_-_74547912_74553897_74554023_74554221_74554283_74554458
ENSMUSG00000113311.2_74554528_74555478_1	chr13	-	400	2	NNC	ENSMUSG00000113311.2	novel	661	2	NA	NA	-622	-2226	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1000	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCGCTGCTCCTAAAGTT	8374	False	NA	NA	False	NA	NA	NA	74555478	74554527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_74554849_74555399
ENSMUSG00000113380.2_13612136_13684130_1	chr13	-	3767	19	Genic_Genomic	ENSMUSG00000113380.2	novel	1209	2	NA	NA	-27140	36792	multi-exon	FALSE	non_canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGAGGGCCCGCCCACCC	NA	False	NA	NA	False	GGGGCT	-3	NA	13684130	13612135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_-_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017
ENSMUSG00000113406.2_65480981_65496411_1	chr13	-	467	4	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	0	3055	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.3666538560063	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCTTGGTCATGAAATC	7281	False	NA	1	True	NA	NA	NA	65496411	65480980	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_65481146_65488362_65488424_65488791_65488919_65496297
ENSMUSG00000113406.2_65487099_65496411_1	chr13	-	428	4	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	0	-3063	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	30.12566274052	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGTGGTAAAGCCTTTT	7281	False	NA	NA	False	NA	NA	NA	65496411	65487098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_65487225_65488362_65488424_65488791_65488919_65496297
ENSMUSG00000113450.2_62601286_62614646_1	chr13	-	2036	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	0	456	0	0	multi-exon	FALSE	canonical	3	15	junction_1	11.5566238822398	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGCATATCACAGTTA	9512	False	NA	-4	True	NA	NA	NA	62614646	62601285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
ENSMUSG00000113529.2_84332148_84360879_1	chr12	-	1299	10	Genic_Genomic	ENSMUSG00000113529.2	novel	3223	1	NA	NA	2971	28480	multi-exon	FALSE	non_canonical	0	0	junction_1	0	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGCGGGCTTAATCC	941	False	NA	NA	False	NA	NA	NA	84360879	84332147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr12_-_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ENSMUSG00000113529.2_84332148_84361628_1	chr12	-	2048	10	Genic_Genomic	ENSMUSG00000113529.2	novel	3223	1	NA	NA	2222	28480	multi-exon	FALSE	non_canonical	0	0	junction_1	0	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGCGGGCTTAATCC	192	False	NA	NA	False	NA	NA	NA	84361628	84332147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr12_-_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ENSMUSG00000113529.2_84332148_84362606_1	chr12	-	3026	10	Genic_Genomic	ENSMUSG00000113529.2	novel	3223	1	NA	NA	1244	28480	multi-exon	FALSE	non_canonical	0	0	junction_1	0	707	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGCGGGCTTAATCC	NA	False	NA	NA	False	NA	NA	NA	84362606	84332147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr12_-_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ENSMUSG00000113555.2_86892552_86893280_4	chr12	-	522	2	NNC	ENSMUSG00000113555.2	novel	483	2	NA	NA	-39	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	5780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTACACAAAGAAATAAAAA	3742	False	NA	NA	False	NA	NA	NA	86893280	86892551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_86892966_86893172
ENSMUSG00000113555.2_86892685_86893280_1	chr12	-	389	2	FSM	ENSMUSG00000113555.2	ENSMUST00000222765.2	483	2	-39	133	-39	-133	multi-exon	TRUE	canonical	0	0	junction_1	0	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGCCAAAGAGAAGGGCA	3742	False	NA	NA	False	NA	NA	NA	86893280	86892684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_86892971_86893177
ENSMUSG00000113559.2_66124441_66138899_1	chr13	-	2483	3	NNC	ENSMUSG00000113559.2	novel	1005	4	NA	NA	-8294	0	intron_retention	FALSE	canonical	3	49	junction_2	59.5	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCATGAATGTTATCAAT	NA	False	NA	NA	False	NA	NA	NA	66138899	66124440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_66126651_66126851_66126979_66138753
ENSMUSG00000113559.2_66124534_66138899_1	chr13	-	2390	3	NNC	ENSMUSG00000113559.2	novel	1005	4	NA	NA	-8294	0	intron_retention	FALSE	canonical	3	49	junction_2	59.5	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGAGAAACCGTGTGAAT	NA	False	NA	NA	False	NA	NA	NA	66138899	66124533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_66126651_66126851_66126979_66138753
ENSMUSG00000113559.2_66125087_66138899_1	chr13	-	1837	3	NNC	ENSMUSG00000113559.2	novel	1005	4	NA	NA	-8294	-553	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	59.5	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTGGCTATCATTGC	NA	False	NA	NA	False	NA	NA	NA	66138899	66125086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_66126651_66126851_66126979_66138753
ENSMUSG00000113566.2_62126860_62260150_1	chr13	+	1286	4	NNC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-118702	289	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	214.715832878921	1911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTAATGGTGTC	1165	False	NA	7	True	NA	NA	NA	62126859	62260150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_62126970_62254561_62254689_62254881_62254943_62259162
ENSMUSG00000113566.2_62126860_62260832_1	chr13	+	1968	4	NNC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-118702	971	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	214.715832878921	2895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGTGCATATTTGTGT	1165	False	NA	NA	False	ATTAAA	-38	NA	62126859	62260832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_62126970_62254561_62254689_62254881_62254943_62259162
ENSMUSG00000113566.2_62245562_62260150_1	chr13	+	1561	5	NNC	ENSMUSG00000113566.2	novel	886	4	NA	NA	0	289	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_2	230.419590095981	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTAATGGTGTC	NA	False	NA	7	True	NA	NA	NA	62245561	62260150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_62245653_62250218_62250513_62254561_62254689_62254881_62254943_62259162
ENSMUSG00000113566.2_62245562_62260150_2	chr13	+	1191	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222089.2	478	4	0	-713	0	289	multi-exon	FALSE	canonical	3	66	junction_3	212.90112467737	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTAATGGTGTC	NA	False	NA	7	True	NA	NA	NA	62245561	62260150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259238
ENSMUSG00000113566.2_62245562_62260150_3	chr13	+	1267	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-22	-359	0	289	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTAATGGTGTC	NA	False	NA	7	True	NA	NA	NA	62245561	62260150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
ENSMUSG00000113566.2_62245562_62260905_1	chr13	+	2022	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-22	-1114	0	1044	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	3171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTTCCACCCCATCTTT	NA	False	NA	NA	False	GATAAA	-33	NA	62245561	62260905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
ENSMUSG00000113572.2_71315518_71316364_1	chr12	-	494	2	NNC	ENSMUSG00000113572.2	novel	1078	2	NA	NA	767	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAAGGTTGTAGCGGCTG	NA	False	NA	NA	False	NA	NA	NA	71316364	71315517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_71315914_71316266
ENSMUSG00000113623.2_62549874_62564857_1	chr13	-	1553	3	NIC	ENSMUSG00000113623.2	novel	633	4	NA	NA	0	433	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	60.5	1599	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGTGCATATTTGTGT	NA	False	NA	NA	False	ATTAAA	-38	NA	62564857	62549873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_-_62551194_62555482_62555610_62564751
ENSMUSG00000113623.2_62549874_62564857_2	chr13	-	1538	4	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	0	433	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	48.0300831655421	1606	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGTGCATATTTGTGT	NA	False	NA	NA	False	ATTAAA	-38	NA	62564857	62549873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_62551118_62555228_62555290_62555482_62555610_62564751
ENSMUSG00000113626.2_61952080_61974328_1	chr13	+	482	2	NNC	ENSMUSG00000113626.2	novel	353	2	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCTCCTGAGAGAATAAG	NA	False	NA	NA	False	NA	NA	NA	61952079	61974328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_61952356_61974122
ENSMUSG00000113626.2_61952080_62009951_2	chr13	+	2594	5	NNC	ENSMUSG00000113626.2	novel	2239	3	NA	NA	0	462	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	29.7772983999556	764	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGTGGTAAAAGCTTGT	NA	False	NA	NA	False	NA	NA	NA	61952079	62009951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_61952220_62005782_62005910_62006094_62006156_62007517_62009074_62009241
ENSMUSG00000113626.2_61987814_62009951_1	chr13	+	2554	5	NNC	ENSMUSG00000113626.2	novel	419	3	NA	NA	-20816	462	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	69.5215793836705	746	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGTGGTAAAAGCTTGT	NA	False	NA	NA	False	NA	NA	NA	61987813	62009951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_61987915_62005782_62005910_62006094_62006156_62007517_62009023_62009191
ENSMUSG00000113642.2_17942189_17951187_1	chr12	+	448	3	NNC	ENSMUSG00000113642.2	novel	550	2	NA	NA	-8546	-161278	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	55.5	805	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTATTATAT	NA	False	NA	NA	False	NA	NA	NA	17942188	17951187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_17942310_17950660_17950788_17950987
ENSMUSG00000113726.2_33211399_33224564_1	chr13	-	1950	7	Genic_Genomic	ENSMUSG00000113726.2	novel	1798	3	NA	NA	-6021	3786	multi-exon	FALSE	non_canonical	0	0	junction_1	0	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGAGGGTTGGGGAAAA	NA	False	NA	NA	False	NA	NA	NA	33224564	33211398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_-_33211584_33213434_33213613_33216898_33217037_33217509_33217628_33219498_33219642_33221954_33222111_33223532
ENSMUSG00000113726.2_33211534_33224564_1	chr13	-	1815	7	Genic_Genomic	ENSMUSG00000113726.2	novel	1798	3	NA	NA	-6021	3651	multi-exon	FALSE	non_canonical	0	0	junction_1	0	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAACACAGCAGCCTTCC	NA	False	NA	NA	False	NA	NA	NA	33224564	33211533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_-_33211584_33213434_33213613_33216898_33217037_33217509_33217628_33219498_33219642_33221954_33222111_33223532
ENSMUSG00000113760.2_66098405_66186860_1	chr13	+	553	3	NNC	ENSMUSG00000113760.2	novel	569	4	NA	NA	-81618	-1201	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	37	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTCTGTATAGTCTCATA	NA	False	NA	NA	False	NA	NA	NA	66098404	66186860	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66098504_66186206_66186334_66186533
ENSMUSG00000113760.2_66180023_66187927_1	chr13	+	435	4	FSM	ENSMUSG00000113760.2	ENSMUST00000221828.2	569	4	0	134	0	-134	multi-exon	FALSE	canonical	3	110	junction_1	62.055530687352	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTTCCTCTCACAATTG	NA	False	NA	NA	False	NA	NA	NA	66180022	66187927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_66180131_66186206_66186334_66186533_66186595_66187788
ENSMUSG00000113760.2_66180023_66190141_1	chr13	+	463	4	NNC	ENSMUSG00000113760.2	novel	569	4	NA	NA	0	2080	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	53.8041716680862	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTTGACTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	66180022	66190141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66180131_66186206_66186334_66186533_66186595_66189974
ENSMUSG00000113902.2_101934361_101941967_1	chr12	-	294	3	NNC	ENSMUSG00000113902.2	novel	861	3	NA	NA	219	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	826.5	10859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAATTTAAAGTGTGATT	NA	False	NA	-9	True	AATAAA	-20	NA	101941967	101934360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_-_101934461_101935751_101935897_101941918
ENSMUSG00000113902.2_101942247_101970245_1	chr12	-	3294	15	NIC	ENSMUSG00000113902.2	novel	861	3	NA	NA	-26918	-240	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGAGCGGCTGAGGCG	6660	False	NA	NA	False	NA	NA	NA	101970245	101942246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr12_-_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ENSMUSG00000113949.2_80438726_80450797_1	chr10	+	972	7	FSM	ENSMUSG00000113949.2	ENSMUST00000079883.12	1804	7	12	820	0	0	multi-exon	FALSE	canonical	3	584	junction_5	41.6239781322684	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCTGCTCCCACCTGTT	NA	False	NA	NA	False	NA	NA	NA	80438725	80450797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ENSMUSG00000113949.2_80438726_80451618_1	chr10	+	1785	7	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	244.873720290457	1120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438725	80451618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450445
ENSMUSG00000113949.2_80438726_80451618_2	chr10	+	1759	7	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	238.087285581477	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438725	80451618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_80438784_80444636_80444685_80445163_80445259_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ENSMUSG00000113949.2_80438726_80451618_3	chr10	+	1788	7	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	242.047802900355	1175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438725	80451618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr10_+_80438784_80444636_80444685_80445168_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ENSMUSG00000113949.2_80439086_80451618_1	chr10	+	1797	7	FSM	ENSMUSG00000113949.2	ENSMUST00000180350.3	1271	7	295	-821	295	1	multi-exon	FALSE	canonical	3	35	junction_1	236.742945453972	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80439085	80451618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80439148_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ENSMUSG00000113955.2_65639603_65651504_1	chr13	-	416	3	NNC	ENSMUSG00000113955.2	novel	364	2	NA	NA	-6897	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	204	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCCTTCGTTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65651504	65639602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_65639775_65644415_65644596_65651440
ENSMUSG00000113955.2_65639603_65651642_1	chr13	-	554	3	NNC	ENSMUSG00000113955.2	novel	364	2	NA	NA	-7035	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	204	2947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCCTTCGTTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65651642	65639602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_65639775_65644415_65644596_65651440
ENSMUSG00000113955.2_65639603_65787442_1	chr13	-	513	3	NNC	ENSMUSG00000113955.2	novel	364	2	NA	NA	-142835	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	204	3058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCCTTCGTTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65787442	65639602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_65639775_65644415_65644605_65787290
ENSMUSG00000113955.2_65643920_65651576_1	chr13	-	514	3	NNC	ENSMUSG00000113955.2	novel	364	2	NA	NA	-6969	-4317	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	14	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCTTTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	65651576	65643919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_65644113_65644415_65644605_65651444
ENSMUSG00000114172.2_62788918_62801026_1	chr13	-	621	4	NNC	ENSMUSG00000114172.2	novel	1732	3	NA	NA	-9960	-1218	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.8561808316413	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTAGTCTCCAAACACATAT	NA	False	NA	3	True	NA	NA	NA	62801026	62788917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_62789244_62790690_62790749_62790936_62791064_62800916
ENSMUSG00000114235.2_36387148_36433604_1	chr19	-	1638	10	Genic_Genomic	ENSMUSG00000114235.2	novel	1120	2	NA	NA	-5047	39244	multi-exon	FALSE	non_canonical	0	0	junction_1	0	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCGATAGGGCGCGGCGG	NA	False	NA	NA	False	NA	NA	NA	36433604	36387147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr19_-_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
ENSMUSG00000114270.2_36080687_36090328_1	chr13	+	1134	8	NIC	ENSMUSG00000114270.2	novel	1036	2	NA	NA	-8753	-15044	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCACCGCCTCTTGGCCCG	NA	False	NA	NA	False	NA	NA	NA	36080686	36090328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36090186
ENSMUSG00000114270.2_36080687_36090328_2	chr13	+	1113	8	NNC	ENSMUSG00000114270.2	novel	1036	2	NA	NA	-8753	-15044	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCACCGCCTCTTGGCCCG	NA	False	NA	NA	False	NA	NA	NA	36080686	36090328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086071_36087670_36087740_36088401_36088547_36090186
ENSMUSG00000114270.2_36080687_36090328_3	chr13	+	1128	8	NNC	ENSMUSG00000114270.2	novel	1036	2	NA	NA	-8753	-15044	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2222	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCACCGCCTCTTGGCCCG	NA	False	NA	NA	False	NA	NA	NA	36080686	36090328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_36080909_36082547_36082683_36082797_36082991_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36090186
ENSMUSG00000114327.2_66829133_66856896_1	chr13	+	686	4	NNC	ENSMUSG00000114327.2	novel	818	2	NA	NA	115	-125	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_3	19.5959179422654	418	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCGTCTGTTCATGAT	NA	False	NA	NA	False	NA	NA	NA	66829132	66856896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66829202_66843359_66843401_66843752_66843820_66856387
ENSMUSG00000114353.2_66820741_66950634_1	chr13	-	561	3	Fusion	ENSMUSG00000074830.5_ENSMUSG00000114353.2	novel	1562	3	NA	NA	-10	-1906	multi-exon	FALSE	canonical	3	69	junction_1	44	395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTGTATAGTCTCATAA	NA	False	NA	NA	False	NA	NA	NA	66950634	66820740	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr13_-_66821069_66942962_66943090_66950528
ENSMUSG00000114353.2_66939250_66950624_1	chr13	-	573	5	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	884	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	66.5807780068692	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	1	True	NA	NA	NA	66950624	66939249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_66939417_66941473_66941596_66942701_66942763_66942962_66943090_66950528
ENSMUSG00000114353.2_66939250_66950624_2	chr13	-	2630	4	FSM	ENSMUSG00000114353.2	ENSMUST00000224917.2	464	4	0	-2166	0	884	multi-exon	FALSE	canonical	3	149	junction_1	5.73488351136175	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	1	True	NA	NA	NA	66950624	66939249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_66941596_66942701_66942763_66942962_66943090_66950528
ENSMUSG00000114353.2_66939586_66950624_1	chr13	-	2294	4	FSM	ENSMUSG00000114353.2	ENSMUST00000224917.2	464	4	0	-1830	0	548	multi-exon	FALSE	canonical	3	149	junction_1	5.73488351136175	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAAAAGAACACATAATG	NA	False	NA	NA	False	NA	NA	NA	66950624	66939585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_66941596_66942701_66942763_66942962_66943090_66950528
ENSMUSG00000114353.2_66942436_66950624_1	chr13	-	550	3	ISM	ENSMUSG00000114353.2	ENSMUST00000224917.2	464	4	0	1020	0	-1020	5prime_fragment	FALSE	canonical	3	157	junction_2	3	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTCTGTATAGTCTCATA	NA	False	NA	NA	False	NA	NA	NA	66950624	66942435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr13_-_66942763_66942962_66943090_66950528
ENSMUSG00000114426.2_66711974_66721635_1	chr13	+	564	3	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	-2340	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_2	10	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTGTATAGTCTCATAA	5534	False	NA	NA	False	NA	NA	NA	66711973	66721635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66712084_66720982_66721110_66721308
ENSMUSG00000114426.2_66711974_66723631_1	chr13	+	1417	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	-344	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	41.3548331180555	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACCTCATGAATATAAT	5534	False	NA	NA	False	NA	NA	NA	66711973	66723631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66722512
ENSMUSG00000114426.2_66711974_66724360_1	chr13	+	2146	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	385	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	41.3548331180555	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAAAAGAACACATAATG	5534	False	NA	NA	False	NA	NA	NA	66711973	66724360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66722512
ENSMUSG00000114426.2_66711974_66724360_2	chr13	+	3289	3	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	385	intron_retention	FALSE	canonical	3	96	junction_2	10	454	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAAAAGAACACATAATG	5534	False	NA	NA	False	NA	NA	NA	66711973	66724360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66712084_66720982_66721110_66721308
ENSMUSG00000114426.2_66711974_66724696_1	chr13	+	465	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	721	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_3	16.3299316185545	873	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	5534	False	NA	11	True	NA	NA	NA	66711973	66724696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66724529
ENSMUSG00000114426.2_66711974_66724696_2	chr13	+	2482	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	721	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	41.3548331180555	646	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	5534	False	NA	11	True	NA	NA	NA	66711973	66724696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66722512
ENSMUSG00000114493.3_56221435_56283700_1	chr13	+	1843	9	Genic_Genomic	ENSMUSG00000114493.3	novel	2677	6	NA	NA	71357	51038	multi-exon	FALSE	non_canonical	0	0	junction_1	0	575	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGGTCAGCACCAACTCC	NA	False	NA	NA	False	NA	NA	NA	56221434	56283700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr13_+_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56283614
ENSMUSG00000114549.2_66831232_66846327_1	chr13	-	1405	4	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9911	-329	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	19.1543438647449	252	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGATGTTTTTTTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	66846327	66831231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_66832305_66833395_66833450_66834628_66834801_66846221
ENSMUSG00000114616.2_66392084_66448940_1	chr13	+	512	3	NNC	ENSMUSG00000114616.2	novel	463	3	NA	NA	0	-4287	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	10	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCTTTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	66392083	66448940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66392214_66448255_66448445_66448747
ENSMUSG00000114616.2_66392084_66599466_1	chr13	+	488	3	FSM	ENSMUSG00000114616.2	ENSMUST00000225647.2	360	3	0	-128	0	128	multi-exon	FALSE	canonical	3	35	junction_1	18.5	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGCCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	66392083	66599466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_66392214_66448255_66448445_66599297
ENSMUSG00000114616.2_66439439_66448940_1	chr13	+	531	3	NNC	ENSMUSG00000114616.2	novel	463	3	NA	NA	47355	-4287	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0.5	586	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCTTTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	66439438	66448940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66439588_66448255_66448445_66448747
ENSMUSG00000114616.2_66439439_66453252_1	chr13	+	488	3	NNC	ENSMUSG00000114616.2	novel	463	3	NA	NA	47355	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.5	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGCCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	66439438	66453252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66439592_66448278_66448445_66453083
ENSMUSG00000114616.2_66439439_66599466_1	chr13	+	507	3	NNC	ENSMUSG00000114616.2	novel	463	3	NA	NA	47355	128	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	29	2120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGCCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	66439438	66599466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66439588_66448255_66448445_66599297
ENSMUSG00000114633.2_55678223_55684346_1	chr13	+	2071	17	NNC	ENSMUSG00000114633.2	novel	523	2	NA	NA	-5585	-91	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCATCTGAGCTCCAATC	NA	False	NA	NA	False	NA	NA	NA	55678222	55684346	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683850_55684108_55684220_55684293
ENSMUSG00000114633.2_55678223_55684346_2	chr13	+	2161	16	NIC	ENSMUSG00000114633.2	novel	523	2	NA	NA	-5585	-91	intron_retention	FALSE	non_canonical	0	0	junction_1	0	997	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCATCTGAGCTCCAATC	NA	False	NA	NA	False	NA	NA	NA	55678222	55684346	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683859_55684108_55684220_55684293
ENSMUSG00000114689.2_98849582_98854191_1	chr13	-	1630	3	NNC	ENSMUSG00000114689.2	novel	570	2	NA	NA	-1173	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	22.5	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCTCCATCTTTGAACA	NA	False	NA	-6	True	ATTAAA	-23	NA	98854191	98849581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_98850076_98852942_98853093_98853205
ENSMUSG00000114689.2_98849582_98854191_2	chr13	-	721	3	NNC	ENSMUSG00000114689.2	novel	570	2	NA	NA	-1173	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.5	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCTCCATCTTTGAACA	NA	False	NA	-6	True	ATTAAA	-23	NA	98854191	98849581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_98850076_98852942_98853093_98854114
ENSMUSG00000114726.2_67537731_67547894_1	chr13	+	1756	4	NIC	ENSMUSG00000114726.2	novel	622	2	NA	NA	-863	-9083	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTCAGAAGGGGATTTCC	NA	False	NA	NA	False	NA	NA	NA	67537730	67547894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr13_+_67539184_67544162_67544259_67544748_67544876_67547814
ENSMUSG00000114753.2_26036337_26041053_1	chr14	-	527	4	NNC	ENSMUSG00000114753.2	novel	5711	2	NA	NA	5056	-171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.55902608401044	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTGGCTTCATTCT	1657	False	NA	NA	False	NA	NA	NA	26041053	26036336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_-_26036463_26036786_26036931_26040411_26040567_26040951
ENSMUSG00000114777.2_66667717_66674703_1	chr13	+	565	3	NNC	ENSMUSG00000114777.2	novel	1568	3	NA	NA	-6326	-2705	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	19.5	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTATAGTCTCATAATA	NA	False	NA	NA	False	NA	NA	NA	66667716	66674703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_+_66667826_66674049_66674177_66674374
ENSMUSG00000114797.2_60455527_60488855_1	chr14	-	3812	15	FSM	ENSMUSG00000114797.2	ENSMUST00000041905.8	3913	15	101	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	25.178546099278	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGTAGGTCTCAGCA	NA	False	NA	-16	True	AATAAA	-18	NA	60488855	60455526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ENSMUSG00000114797.2_60456917_60488855_1	chr14	-	2422	15	FSM	ENSMUSG00000114797.2	ENSMUST00000041905.8	3913	15	101	1390	0	949	multi-exon	FALSE	canonical	3	173	junction_2	25.178546099278	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCCTCAGACTGTTAT	NA	False	NA	2	True	CATAAA	-23	NA	60488855	60456916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ENSMUSG00000114839.2_66886435_66901046_1	chr13	-	1400	4	NNC	ENSMUSG00000114839.2	novel	1153	3	NA	NA	-11669	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	77.0295758495109	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGTCCAAAGACATAAAGG	4300	False	NA	NA	False	NA	NA	NA	66901046	66886434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_66887399_66888839_66889043_66889243_66889330_66900899
ENSMUSG00000114839.2_66887358_66892960_1	chr13	-	476	4	NNC	ENSMUSG00000114839.2	novel	1153	3	NA	NA	-3583	-923	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	79.79974937304	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATGTGGTAAAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	66892960	66887357	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_66887399_66888839_66889043_66889243_66889330_66892814
ENSMUSG00000114839.2_66887423_66901050_1	chr13	-	1857	3	NNC	ENSMUSG00000114839.2	novel	1153	3	NA	NA	-11673	-988	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	69.5	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTGCTGGCTATCATT	4296	False	NA	NA	False	NA	NA	NA	66901050	66887422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_66889043_66889243_66889330_66900899
ENSMUSG00000115003.2_47013024_47025820_1	chr14	+	1490	5	Genic_Genomic	ENSMUSG00000115003.2	novel	898	1	NA	NA	-12066	-167	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4068	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCCGCGGCCTCCTCCCG	NA	False	NA	NA	False	NA	NA	NA	47013023	47025820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr14_+_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
ENSMUSG00000115003.2_47013127_47025791_1	chr14	+	1351	5	Genic_Genomic	ENSMUSG00000115003.2	novel	898	1	NA	NA	-11963	-196	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3624	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCACTTCCCCCGGCCTCA	NA	False	NA	NA	False	NA	NA	NA	47013126	47025791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr14_+_47014007_47016345_47016490_47017569_47017683_47021568_47021631_47025639
ENSMUSG00000115003.2_47013127_47025791_2	chr14	+	1289	4	Genic_Genomic	ENSMUSG00000115003.2	novel	898	1	NA	NA	-11963	-196	multi-exon	FALSE	non_canonical	0	0	junction_1	0	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCACTTCCCCCGGCCTCA	NA	False	NA	NA	False	NA	NA	NA	47013126	47025791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr14_+_47014007_47016345_47016490_47017569_47017683_47025639
ENSMUSG00000115003.2_47013127_47025791_3	chr14	+	1273	6	Genic_Genomic	ENSMUSG00000115003.2	novel	898	1	NA	NA	-11963	-196	multi-exon	FALSE	non_canonical	0	0	junction_1	0	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCACTTCCCCCGGCCTCA	NA	False	NA	NA	False	NA	NA	NA	47013126	47025791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr14_+_47013871_47013955_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
ENSMUSG00000115003.2_47013744_47025791_1	chr14	+	741	5	Genic_Genomic	ENSMUSG00000115003.2	novel	898	1	NA	NA	-11346	-196	multi-exon	FALSE	non_canonical	0	0	junction_1	0	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCACTTCCCCCGGCCTCA	NA	False	NA	NA	False	NA	NA	NA	47013743	47025791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr14_+_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
ENSMUSG00000115090.2_79086632_79302708_1	chr14	-	3468	26	Genic_Genomic	ENSMUSG00000115090.2	novel	614	2	NA	NA	-118041	95988	multi-exon	FALSE	non_canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGGAGGCGGGTCCGCC	NA	False	NA	NA	False	NA	NA	NA	79302708	79086631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr14_-_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293
ENSMUSG00000115092.2_76753426_76767555_1	chr14	+	665	3	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10606	-501	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	3.5	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTTTTGTGTGTGCTTG	NA	False	NA	NA	False	NA	NA	NA	76753425	76767555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_76753538_76766569_76766669_76767101
ENSMUSG00000115092.2_76753426_76767555_2	chr14	+	834	4	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10606	-501	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	6.54896090146283	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTTTTGTGTGTGCTTG	NA	False	NA	NA	False	NA	NA	NA	76753425	76767555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_76753538_76764032_76764202_76766569_76766669_76767101
ENSMUSG00000115092.2_76753426_76768195_1	chr14	+	476	3	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10606	9	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	0	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCACCCTCCTGTTCACTG	NA	False	NA	15	True	AATAAA	-31	NA	76753425	76768195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_76753538_76766569_76766669_76767930
ENSMUSG00000115092.2_76753426_76768195_2	chr14	+	1474	4	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10606	9	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	6.54896090146283	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCACCCTCCTGTTCACTG	NA	False	NA	15	True	AATAAA	-31	NA	76753425	76768195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_76753538_76764032_76764202_76766569_76766669_76767101
ENSMUSG00000115092.2_76753426_76768195_3	chr14	+	645	4	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10606	9	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	4.24264068711928	287	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCACCCTCCTGTTCACTG	NA	False	NA	15	True	AATAAA	-31	NA	76753425	76768195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_76753538_76764032_76764202_76766569_76766669_76767930
ENSMUSG00000115092.2_76753426_76768195_4	chr14	+	496	3	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10606	9	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	1.5	238	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCACCCTCCTGTTCACTG	NA	False	NA	15	True	AATAAA	-31	NA	76753425	76768195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_76753538_76766569_76766669_76767910
ENSMUSG00000115097.2_47478401_47514293_1	chr14	+	4264	25	NIC	ENSMUSG00000115097.2	novel	344	2	NA	NA	-35426	40	intron_retention	FALSE	non_canonical	0	0	junction_1	0	569	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTCTGGCGCGCTCGCCC	4897	False	NA	NA	False	NA	NA	NA	47478400	47514293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ENSMUSG00000115097.2_47503215_47514293_1	chr14	+	1475	11	NIC	ENSMUSG00000115097.2	novel	344	2	NA	NA	-10612	40	intron_retention	FALSE	non_canonical	0	0	junction_1	0	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTCTGGCGCGCTCGCCC	9003	False	NA	NA	False	NA	NA	NA	47503214	47514293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ENSMUSG00000115154.2_55937491_55950952_1	chr14	+	2731	15	Genic_Genomic	ENSMUSG00000115154.2	novel	449	3	NA	NA	18116	1213	multi-exon	FALSE	non_canonical	0	0	junction_1	0	482	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGCGGGCCGGGTAAGC	NA	False	NA	NA	False	NA	NA	NA	55937490	55950952	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr14_+_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950843
ENSMUSG00000115219.3_20430343_20437619_1	chr16	+	992	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	0	142	0	0	multi-exon	FALSE	canonical	3	220	junction_2	23	1491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCTGGCTTCTAGGATT	5899	False	NA	20	True	AATACA	-30	NA	20430342	20437619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_20430571_20436375_20436660_20437139
ENSMUSG00000115423.3_136723191_136733087_1	chr2	-	722	3	FSM	ENSMUSG00000115423.3	ENSMUST00000227806.2	944	3	222	0	222	0	multi-exon	FALSE	canonical	3	323	junction_1	8.5	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGCTGCCTTCACAAGT	NA	False	NA	NA	False	AATAAA	-21	NA	136733087	136723190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_136723560_136727392_136727621_136732962
ENSMUSG00000115423.3_136723333_136733087_1	chr2	-	580	3	FSM	ENSMUSG00000115423.3	ENSMUST00000227806.2	944	3	222	142	222	-142	multi-exon	FALSE	canonical	3	323	junction_1	8.5	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTAATCTATGCTGGT	NA	False	NA	-21	True	AATAAA	-22	NA	136733087	136723332	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_136723560_136727392_136727621_136732962
ENSMUSG00000115483.2_43129175_43163125_1	chr14	+	1375	5	NNC	ENSMUSG00000115483.2	novel	1591	4	NA	NA	-3318	-336	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	16.5283846760656	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	43129174	43163125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_43129304_43132676_43132821_43157302_43157435_43158114_43158297_43162337
ENSMUSG00000115509.2_34312575_34317885_1	chr14	+	1328	5	NIC	ENSMUSG00000115509.2	novel	1558	2	NA	NA	-474	-9772	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTCTGGACCGTCTCCG	1309	False	NA	NA	False	NA	NA	NA	34312574	34317885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr14_+_34313288_34314909_34315027_34315786_34315968_34316723_34316832_34317676
ENSMUSG00000115546.2_38488482_38519510_1	chr15	+	4220	13	Genic_Genomic	ENSMUSG00000115546.2	novel	1266	1	NA	NA	-30548	-785	multi-exon	FALSE	non_canonical	0	0	junction_1	0	889	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCGGTGCCAGAGACGCC	NA	False	NA	NA	False	NA	NA	NA	38488481	38519510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ENSMUSG00000115546.2_38488482_38519510_2	chr15	+	3812	12	Genic_Genomic	ENSMUSG00000115546.2	novel	1266	1	NA	NA	-30548	-785	multi-exon	FALSE	non_canonical	0	0	junction_1	0	754	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCGGTGCCAGAGACGCC	NA	False	NA	NA	False	NA	NA	NA	38488481	38519510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_38490624_38491874_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ENSMUSG00000115546.2_38488482_38519510_3	chr15	+	4060	12	Genic_Genomic	ENSMUSG00000115546.2	novel	1266	1	NA	NA	-30548	-785	multi-exon	FALSE	non_canonical	0	0	junction_1	0	923	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCGGTGCCAGAGACGCC	NA	False	NA	NA	False	NA	NA	NA	38488481	38519510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ENSMUSG00000115546.2_38489695_38519510_2	chr15	+	2599	12	Genic_Genomic	ENSMUSG00000115546.2	novel	1266	1	NA	NA	-29335	-785	multi-exon	FALSE	non_canonical	0	0	junction_1	0	198	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCGGTGCCAGAGACGCC	NA	False	NA	NA	False	NA	NA	NA	38489694	38519510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_38490624_38491874_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ENSMUSG00000115546.2_38489695_38519510_3	chr15	+	2847	12	Genic_Genomic	ENSMUSG00000115546.2	novel	1266	1	NA	NA	-29335	-785	multi-exon	FALSE	non_canonical	0	0	junction_1	0	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCGGTGCCAGAGACGCC	NA	False	NA	NA	False	NA	NA	NA	38489694	38519510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ENSMUSG00000115546.2_38490038_38519510_2	chr15	+	2504	12	Genic_Genomic	ENSMUSG00000115546.2	novel	1266	1	NA	NA	-28992	-785	multi-exon	FALSE	non_canonical	0	0	junction_1	0	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCGGTGCCAGAGACGCC	NA	False	NA	NA	False	NA	NA	NA	38490037	38519510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ENSMUSG00000115546.2_38490038_38519510_3	chr15	+	2256	12	Genic_Genomic	ENSMUSG00000115546.2	novel	1266	1	NA	NA	-28992	-785	multi-exon	FALSE	non_canonical	0	0	junction_1	0	153	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCGGTGCCAGAGACGCC	NA	False	NA	NA	False	NA	NA	NA	38490037	38519510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_38490624_38491874_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ENSMUSG00000115685.2_34440651_34443368_1	chr15	+	468	5	Genic_Genomic	ENSMUSG00000115685.2	novel	1833	1	NA	NA	-2475	-1590	multi-exon	FALSE	non_canonical	0	0	junction_1	0	129431	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGCTCCCACAATGCAA	6460	False	NA	NA	False	NA	NA	NA	34440650	34443368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443330
ENSMUSG00000115685.2_34440651_34443421_1	chr15	+	628	4	Genic_Genomic	ENSMUSG00000115685.2	novel	1833	1	NA	NA	-2475	-1537	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13488	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCGGAAGAGAAGCCGG	6460	False	NA	NA	False	NA	NA	NA	34440650	34443421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_34440751_34441377_34441509_34442780_34442927_34443170
ENSMUSG00000115685.2_34440651_34443686_1	chr15	+	786	5	Genic_Genomic	ENSMUSG00000115685.2	novel	1833	1	NA	NA	-2475	-1272	multi-exon	FALSE	non_canonical	0	0	junction_1	0	132400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTCTTGGGCGTGCT	6460	False	NA	NA	False	NA	NA	NA	34440650	34443686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr15_+_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443330
ENSMUSG00000115728.2_47535723_47560552_1	chr14	-	4509	5	Genic_Genomic	ENSMUSG00000115728.2_ENSMUSG00000114977.2	novel	647	1	NA	NA	-2039	-758	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGACCTGGCCGCCCGTTA	7879	False	NA	NA	False	NA	NA	NA	47560552	47535722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr14_-_47535863_47546023_47546046_47547871_47548571_47556868_47557353_47557388
ENSMUSG00000115823.2_47778350_47814275_1	chr14	+	3802	12	NNC	ENSMUSG00000115823.2	novel	538	2	NA	NA	-1087	32601	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	239	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGTTGGAAAGGAAAGCAA	NA	False	NA	NA	False	AAGAAA	-36	NA	47778349	47814275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr14_+_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47813988_47814069_47814201
ENSMUSG00000115829.2_35371692_35472084_1	chr15	-	2646	17	NIC	ENSMUSG00000115829.2	novel	1426	3	NA	NA	-98791	-3093	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTACCTGGCGTCCGCCGC	NA	False	NA	NA	False	NA	NA	NA	35472084	35371691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028
ENSMUSG00000115923.2_16130102_16176829_1	chr16	+	4027	19	Genic_Genomic	ENSMUSG00000115923.2	novel	600	2	NA	NA	-36965	-46	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCCCGCACCCATTGGG	NA	False	NA	NA	False	NA	NA	NA	16130101	16176829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUSG00000115923.2_16131247_16176829_1	chr16	+	2882	19	Genic_Genomic	ENSMUSG00000115923.2	novel	600	2	NA	NA	-35820	-46	multi-exon	FALSE	non_canonical	0	0	junction_1	0	653	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCCCGCACCCATTGGG	NA	False	NA	NA	False	NA	NA	NA	16131246	16176829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUSG00000115923.2_16131698_16176829_1	chr16	+	2431	19	Genic_Genomic	ENSMUSG00000115923.2	novel	600	2	NA	NA	-35369	-46	multi-exon	FALSE	non_canonical	0	0	junction_1	0	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCCCGCACCCATTGGG	NA	False	NA	NA	False	NA	NA	NA	16131697	16176829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUSG00000115923.2_16132276_16176829_1	chr16	+	2073	18	Genic_Genomic	ENSMUSG00000115923.2	novel	600	2	NA	NA	-34791	-46	multi-exon	FALSE	non_canonical	0	0	junction_1	0	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCCCGCACCCATTGGG	NA	False	NA	NA	False	NA	NA	NA	16132275	16176829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUSG00000115987.2_76506309_76509253_1	chr15	-	1186	8	ISM	ENSMUSG00000115987.2	ENSMUST00000229019.2	941	10	953	0	953	0	3prime_fragment	FALSE	canonical	3	946	junction_3	80.0211706681553	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9296	False	NA	-25	True	AATAAA	-17	NA	76509253	76506308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791
ENSMUSG00000115987.2_76506309_76510274_1	chr15	-	888	9	NNC	ENSMUSG00000115987.2	novel	911	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	341.849382038347	2953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9603	False	NA	-25	True	AATAAA	-17	NA	76510274	76506308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76509327_76509406_76510188
ENSMUSG00000115987.2_76506309_76510274_2	chr15	-	882	9	NIC	ENSMUSG00000115987.2	novel	911	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_7	331.20912483656	2862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9603	False	NA	-25	True	AATAAA	-17	NA	76510274	76506308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76509333_76509406_76510188
ENSMUSG00000116048.2_93406743_93435679_1	chr1	+	1415	13	FSM	ENSMUSG00000116048.2	ENSMUST00000179353.8	3219	13	28	1776	28	-1776	multi-exon	FALSE	canonical	3	41	junction_1	266.051999929838	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGAAGTACTTTTA	NA	False	NA	NA	False	NA	NA	NA	93406742	93435679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_93406791_93416849_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000116048.2_93406743_93437192_1	chr1	+	2928	13	FSM	ENSMUSG00000116048.2	ENSMUST00000179353.8	3219	13	28	263	28	-263	multi-exon	FALSE	canonical	3	41	junction_1	266.051999929838	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCGGTGTGAGTCCCAT	NA	False	NA	NA	False	AATGAA	-12	NA	93406742	93437192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_93406791_93416849_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000116048.2_93406743_93437455_1	chr1	+	3186	13	NNC	ENSMUSG00000116048.2	novel	3219	13	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	363.294751391881	2848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406742	93437455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr1_+_93406791_93416849_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429233_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000116223.2_98825958_98832319_1	chr15	+	1623	5	NNC	ENSMUSG00000116223.2	novel	1345	2	NA	NA	-6248	-5024	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	65114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCGCCCGCTCCGAGCC	NA	False	NA	NA	False	NA	NA	NA	98825957	98832319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_98825967_98829307_98830444_98830572_98830722_98830853_98831077_98832213
ENSMUSG00000116223.2_98829306_98832319_1	chr15	+	1610	4	NNC	ENSMUSG00000116223.2	novel	1345	2	NA	NA	-2900	-5024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	14006	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCGCCCGCTCCGAGCC	NA	False	NA	NA	False	NA	NA	NA	98829305	98832319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_98830444_98830572_98830722_98830853_98831071_98832213
ENSMUSG00000116223.2_98829306_98832319_10	chr15	+	1592	4	NNC	ENSMUSG00000116223.2	novel	1345	2	NA	NA	-2900	-5024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4318	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCGCCCGCTCCGAGCC	NA	False	NA	NA	False	NA	NA	NA	98829305	98832319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_98830444_98830596_98830722_98830853_98831077_98832213
ENSMUSG00000116223.2_98829306_98832319_2	chr15	+	1610	4	NNC	ENSMUSG00000116223.2	novel	1345	2	NA	NA	-2900	-5024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	28267	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCGCCCGCTCCGAGCC	NA	False	NA	NA	False	NA	NA	NA	98829305	98832319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_98830444_98830572_98830716_98830853_98831077_98832213
ENSMUSG00000116223.2_98829306_98832319_3	chr15	+	921	5	NNC	ENSMUSG00000116223.2	novel	1345	2	NA	NA	-2900	-5024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1665	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCGCCCGCTCCGAGCC	NA	False	NA	NA	False	NA	NA	NA	98829305	98832319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_98829411_98830105_98830444_98830572_98830722_98830853_98831077_98832213
ENSMUSG00000116223.2_98829306_98832319_4	chr15	+	1591	4	NNC	ENSMUSG00000116223.2	novel	1345	2	NA	NA	-2900	-5024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4592	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCGCCCGCTCCGAGCC	NA	False	NA	NA	False	NA	NA	NA	98829305	98832319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_98830444_98830572_98830722_98830878_98831077_98832213
ENSMUSG00000116223.2_98829306_98832319_5	chr15	+	948	5	NNC	ENSMUSG00000116223.2	novel	1345	2	NA	NA	-2900	-5024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1898	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCGCCCGCTCCGAGCC	NA	False	NA	NA	False	NA	NA	NA	98829305	98832319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_98829449_98830116_98830444_98830572_98830722_98830853_98831077_98832213
ENSMUSG00000116223.2_98829306_98832319_6	chr15	+	1604	4	NNC	ENSMUSG00000116223.2	novel	1345	2	NA	NA	-2900	-5024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	14346	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCGCCCGCTCCGAGCC	NA	False	NA	NA	False	NA	NA	NA	98829305	98832319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_98830444_98830572_98830722_98830853_98831077_98832225
ENSMUSG00000116223.2_98829306_98832319_7	chr15	+	1061	5	NNC	ENSMUSG00000116223.2	novel	1345	2	NA	NA	-2900	-5024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCGCCCGCTCCGAGCC	NA	False	NA	NA	False	NA	NA	NA	98829305	98832319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_98829517_98830071_98830444_98830572_98830722_98830853_98831077_98832213
ENSMUSG00000116223.2_98829306_98832319_8	chr15	+	1609	4	NNC	ENSMUSG00000116223.2	novel	1345	2	NA	NA	-2900	-5024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	16988	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCGCCCGCTCCGAGCC	NA	False	NA	NA	False	NA	NA	NA	98829305	98832319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_98830444_98830572_98830722_98830860_98831077_98832213
ENSMUSG00000116223.2_98829306_98832319_9	chr15	+	1600	4	NNC	ENSMUSG00000116223.2	novel	1345	2	NA	NA	-2900	-5024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	14503	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCGCCCGCTCCGAGCC	NA	False	NA	NA	False	NA	NA	NA	98829305	98832319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_98830428_98830572_98830722_98830853_98831077_98832213
ENSMUSG00000116223.2_98830134_98832319_1	chr15	+	782	4	NNC	ENSMUSG00000116223.2	novel	1345	2	NA	NA	-2072	-5024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	346	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCGCCCGCTCCGAGCC	NA	False	NA	NA	False	NA	NA	NA	98830133	98832319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_+_98830444_98830572_98830722_98830853_98831071_98832213
ENSMUSG00000116295.2_97057873_97065124_1	chr15	-	1707	4	FSM	ENSMUSG00000116295.2	ENSMUST00000229999.2	510	4	0	-1197	0	941	multi-exon	FALSE	canonical	3	275	junction_3	214.206027511418	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTGTTGCTTGCTTGCT	NA	False	NA	-5	True	NA	NA	NA	97065124	97057872	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_97059277_97059835_97059964_97064383_97064492_97065057
ENSMUSG00000116295.2_97057873_97065124_2	chr15	-	1723	4	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	0	941	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	16.5797734872612	2281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTGTTGCTTGCTTGCT	NA	False	NA	-5	True	NA	NA	NA	97065124	97057872	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_97059277_97059835_97059964_97064383_97064508_97065057
ENSMUSG00000116295.2_97058639_97065124_1	chr15	-	941	4	FSM	ENSMUSG00000116295.2	ENSMUST00000229999.2	510	4	0	-431	0	175	multi-exon	FALSE	canonical	3	275	junction_3	214.206027511418	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTTCTACCCTGCC	NA	False	NA	NA	False	NA	NA	NA	97065124	97058638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_97059277_97059835_97059964_97064383_97064492_97065057
ENSMUSG00000116295.2_97058639_97065124_2	chr15	-	957	4	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	0	175	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	16.5797734872612	1781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTTCTACCCTGCC	NA	False	NA	NA	False	NA	NA	NA	97065124	97058638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_97059277_97059835_97059964_97064383_97064508_97065057
ENSMUSG00000116295.2_97058814_97065124_1	chr15	-	856	5	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	335.890607192282	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTGATCATACCATAGC	NA	False	NA	-10	True	AATAAA	-17	NA	97065124	97058813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_97059277_97059835_97059964_97063982_97064057_97064383_97064508_97065057
ENSMUSG00000116295.2_97058814_97065124_3	chr15	-	782	4	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	16.5797734872612	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTGATCATACCATAGC	NA	False	NA	-10	True	AATAAA	-17	NA	97065124	97058813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_97059277_97059835_97059964_97064383_97064508_97065057
ENSMUSG00000116396.2_84604284_84656405_1	chr15	-	1510	12	NIC	ENSMUSG00000116396.2	novel	1237	3	NA	NA	-51938	-5454	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCCGTCCCCGGACA	NA	False	NA	NA	False	NA	NA	NA	84656405	84604283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr15_-_84604329_84617091_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ENSMUSG00000116396.2_84604284_84656405_2	chr15	-	1490	12	NNC	ENSMUSG00000116396.2	novel	1237	3	NA	NA	-51938	-5454	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCCGTCCCCGGACA	NA	False	NA	NA	False	NA	NA	NA	84656405	84604283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_84604314_84617096_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ENSMUSG00000116396.2_84604284_84656405_3	chr15	-	1624	13	NNC	ENSMUSG00000116396.2	novel	1237	3	NA	NA	-51938	-5454	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCCGTCCCCGGACA	NA	False	NA	NA	False	NA	NA	NA	84656405	84604283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr15_-_84604309_84604580_84604715_84617091_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ENSMUSG00000116469.2_8951132_8980201_1	chr16	+	738	3	Fusion	ENSMUSG00000116469.2_ENSMUSG00000116123.2	novel	673	3	NA	NA	-25502	3	multi-exon	FALSE	canonical	0	0	junction_2	18.5	189	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACTTCCCATTCCAACT	6232	False	NA	18	True	AATAAA	-19	NA	8951131	8980201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr16_+_8951217_8953545_8953645_8979647
ENSMUSG00000116564.2_17594834_17614230_3	chr17	+	2021	10	NNC	ENSMUSG00000116564.2	novel	3220	10	NA	NA	0	-931	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	136.524135251511	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAATCTGTAGTTCTCTCT	NA	False	NA	8	True	AATAAA	-17	NA	17594833	17614230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_17594933_17597980_17598120_17598744_17598857_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ENSMUSG00000116564.2_17594834_17615161_1	chr17	+	409	3	NNC	ENSMUSG00000116564.2	novel	1596	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	214.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGGCTTTACTTCA	NA	False	NA	10	True	AATAAA	-15	NA	17594833	17615161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_17594933_17597980_17598120_17614990
ENSMUSG00000116627.2_21053853_21071251_1	chr12	+	396	4	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	13316	-19178	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	35.4400902933387	382	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	21053852	21071251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr12_+_21053965_21062987_21063115_21063316_21063378_21071155
ENSMUSG00000116641.2_94544918_94554300_1	chr16	+	920	5	NNC	ENSMUSG00000116641.2	novel	1200	5	NA	NA	22165	3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	5.44862367942584	141	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACCATTATTTGTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	94544917	94554300	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_94545201_94549749_94549952_94553485_94553564_94553805_94553999_94554136
ENSMUSG00000116673.2_97864468_97883192_1	chr16	-	3689	4	ISM	ENSMUSG00000116673.2	ENSMUST00000232614.2	497	5	18	11138	0	-756	5prime_fragment	FALSE	canonical	3	34	junction_3	16.6599986661331	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAAAGAGAGAGATGCC	NA	False	NA	NA	False	NA	NA	NA	97883192	97864467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr16_-_97867866_97868954_97869016_97869203_97869331_97883089
ENSMUSG00000116802.2_17455134_17486437_1	chr17	+	2306	4	FSM	ENSMUSG00000116802.2	ENSMUST00000231355.2	2194	4	0	-112	0	112	multi-exon	FALSE	canonical	3	89	junction_3	12.3917535302941	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCTAAGGGATGCAACAT	6224	False	NA	NA	False	NA	NA	NA	17455133	17486437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_17455288_17482739_17482867_17483108_17483170_17484473
ENSMUSG00000116802.2_17455134_17486602_1	chr17	+	2471	4	FSM	ENSMUSG00000116802.2	ENSMUST00000231355.2	2194	4	0	-277	0	277	multi-exon	FALSE	canonical	3	89	junction_3	12.3917535302941	1268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCCAAGTATGCTGCTC	6224	False	NA	15	True	NA	NA	NA	17455133	17486602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_17455288_17482739_17482867_17483108_17483170_17484473
ENSMUSG00000116831.2_22677904_22713136_1	chr16	-	463	3	NNC	ENSMUSG00000116831.2	novel	1769	4	NA	NA	0	15829	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	5	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAAGCAGTGAGTTTCCC	NA	False	NA	NA	False	TTTAAA	-6	NA	22713136	22677903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_22678205_22705778_22705854_22713049
ENSMUSG00000116835.2_33827213_33827862_1	chr16	-	380	2	Genic_Genomic	ENSMUSG00000116835.2	novel	615	1	NA	NA	-35	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACGTGATATTTGTAAAA	NA	False	NA	NA	False	NA	NA	NA	33827862	33827212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_-_33827487_33827756
ENSMUSG00000116835.2_33827213_33827862_2	chr16	-	120	2	Genic_Genomic	ENSMUSG00000116835.2	novel	615	1	NA	NA	-35	0	multi-exon	FALSE	canonical	0	0	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACGTGATATTTGTAAAA	NA	False	NA	NA	False	NA	NA	NA	33827862	33827212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_-_33827247_33827776
ENSMUSG00000116836.2_90722697_90731714_1	chr16	+	1074	6	Genic_Genomic	ENSMUSG00000116836.2	novel	2579	1	NA	NA	277	6716	multi-exon	FALSE	non_canonical	0	0	junction_1	0	806	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGGAACCGTGGAACGC	NA	False	NA	NA	False	NA	NA	NA	90722696	90731714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90727881_90728050_90731469
ENSMUSG00000116840.2_34842798_34926788_1	chr16	-	839	7	NIC	ENSMUSG00000116840.2	novel	544	5	NA	NA	-83213	-18830	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	0	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTACGAGGGGGCGGAGG	NA	False	NA	NA	False	NA	NA	NA	34926788	34842797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_34843006_34846194_34846313_34869089_34869109_34895975_34896065_34920125_34920248_34922315_34922495_34926684
ENSMUSG00000116840.2_34842798_34926948_1	chr16	-	999	7	NIC	ENSMUSG00000116840.2	novel	544	5	NA	NA	-83373	-18830	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1864	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTACGAGGGGGCGGAGG	NA	False	NA	NA	False	NA	NA	NA	34926948	34842797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr16_-_34843006_34846194_34846313_34869089_34869109_34895975_34896065_34920125_34920248_34922315_34922495_34926684
ENSMUSG00000116840.2_34842798_34926948_2	chr16	-	998	6	NNC	ENSMUSG00000116840.2	novel	544	5	NA	NA	-83373	-18830	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	569	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTACGAGGGGGCGGAGG	NA	False	NA	NA	False	NA	NA	NA	34926948	34842797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_34843006_34846194_34846313_34895957_34896065_34920125_34920248_34922315_34922495_34926684
ENSMUSG00000116840.2_34842798_34926948_3	chr16	-	991	6	NNC	ENSMUSG00000116840.2	novel	544	5	NA	NA	-83373	-18830	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	192	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTACGAGGGGGCGGAGG	NA	False	NA	NA	False	NA	NA	NA	34926948	34842797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_34843006_34846194_34846330_34895975_34896065_34920131_34920248_34922315_34922495_34926684
ENSMUSG00000116840.2_34842798_34926948_4	chr16	-	991	6	NNC	ENSMUSG00000116840.2	novel	544	5	NA	NA	-83373	-18830	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1062	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTACGAGGGGGCGGAGG	NA	False	NA	NA	False	NA	NA	NA	34926948	34842797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_-_34843006_34846194_34846313_34895964_34896065_34920125_34920248_34922315_34922495_34926684
ENSMUSG00000116852.2_3607831_3610138_1	chr17	+	625	2	NNC	ENSMUSG00000116852.2	novel	350	2	NA	NA	-268	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	33	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTCTTTCTGTTGTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	3607830	3610138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_+_3608135_3609817
ENSMUSG00000116875.2_24348144_24349784_2	chr16	+	1062	2	Genic_Genomic	ENSMUSG00000116875.2	novel	969	1	NA	NA	0	672	multi-exon	FALSE	canonical	0	0	junction_1	0	1069	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTACCAACTAGCTAATAAA	NA	False	NA	NA	False	AATAAA	-40	NA	24348143	24349784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_24348349_24348927
ENSMUSG00000116875.2_24348144_24349784_5	chr16	+	1526	2	Genic_Genomic	ENSMUSG00000116875.2	novel	969	1	NA	NA	0	672	multi-exon	FALSE	non_canonical	1	15	junction_1	0	1501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTACCAACTAGCTAATAAA	NA	False	NA	NA	False	AATAAA	-40	NA	24348143	24349784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_24348184_24348298
ENSMUSG00000116875.2_24348144_24349784_6	chr16	+	1446	2	Genic_Genomic	ENSMUSG00000116875.2	novel	969	1	NA	NA	0	672	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTACCAACTAGCTAATAAA	NA	False	NA	NA	False	AATAAA	-40	NA	24348143	24349784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr16_+_24348483_24348677
ENSMUSG00000116947.2_93811726_93815011_2	chr16	+	2571	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-574	1916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	116.802777744748	783	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2290	False	NA	17	True	NA	NA	NA	93811725	93815011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_93811971_93812291_93812370_93812713_93814317_93814366
ENSMUSG00000116947.2_93811826_93815011_1	chr16	+	1117	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-474	1916	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	116.802777744748	1074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2390	False	NA	17	True	NA	NA	NA	93811825	93815011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_93811971_93812291_93812370_93812713_93813006_93814409
ENSMUSG00000116947.2_93811826_93815011_2	chr16	+	954	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-474	1916	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_3	36.1693547388148	923	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2390	False	NA	17	True	NA	NA	NA	93811825	93815011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_93811971_93812291_93812370_93812713_93813006_93814572
ENSMUSG00000116947.2_93811826_93815011_3	chr16	+	876	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-474	1916	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	67.5	480	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2390	False	NA	17	True	NA	NA	NA	93811825	93815011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr16_+_93811971_93812713_93813006_93814572
ENSMUSG00000117216.2_28120100_28128113_1	chr17	+	2637	5	Genic_Genomic	ENSMUSG00000117216.2	novel	547	1	NA	NA	-6677	790	multi-exon	FALSE	non_canonical	0	0	junction_1	0	705	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGGCGTAGACCGCGCCT	NA	False	NA	NA	False	NA	NA	NA	28120099	28128113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_+_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
ENSMUSG00000117284.2_22504852_22533818_1	chr17	-	3584	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_6	14.4501057281791	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22533818	22504851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528185_22528296_22528485_22528579_22532217_22532302_22533727
ENSMUSG00000117358.2_74826660_74834386_1	chr17	-	381	3	NNC	ENSMUSG00000117358.2	novel	327	3	NA	NA	253	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.5	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCATTGGTCTCAGTGTT	NA	False	NA	-5	True	AATAAA	-14	NA	74834386	74826659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_74826911_74830509_74830574_74834320
ENSMUSG00000117358.2_74826660_74834386_2	chr17	-	486	4	NNC	ENSMUSG00000117358.2	novel	1389	4	NA	NA	253	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.08248290463863	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCATTGGTCTCAGTGTT	NA	False	NA	-5	True	AATAAA	-14	NA	74834386	74826659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_74826911_74827487_74827593_74830509_74830574_74834320
ENSMUSG00000117431.2_84316038_84320842_1	chr17	+	647	2	NIC	ENSMUSG00000117431.2	novel	440	3	NA	NA	-285	5	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGGTTGCTCTGGAT	2193	False	NA	NA	False	ATTAAA	-20	NA	84316037	84320842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_+_84316398_84320555
ENSMUSG00000117477.2_24206786_24215105_1	chr7	-	889	3	Genic_Genomic	ENSMUSG00000117477.2	novel	1973	1	NA	NA	-3225	3122	multi-exon	FALSE	non_canonical	0	0	junction_1	0	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGAGCGGGCGAGCGAAC	NA	False	NA	NA	False	NA	NA	NA	24215105	24206785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr7_-_24206862_24209970_24210179_24214500
ENSMUSG00000117494.2_12888385_12996374_2	chr18	+	2532	13	Genic_Genomic	ENSMUSG00000117494.2	novel	2858	1	NA	NA	-107101	-1969	multi-exon	FALSE	non_canonical	0	0	junction_1	0	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGATTTAGAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	12888384	12996374	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_+_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12996128
ENSMUSG00000117494.2_12888385_12996440_1	chr18	+	2761	14	Genic_Genomic	ENSMUSG00000117494.2	novel	2858	1	NA	NA	-107101	-1903	multi-exon	TRUE	non_canonical	0	0	junction_1	0	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTTTTAGAAGGCAGT	NA	False	NA	NA	False	GATAAA	-11	NA	12888384	12996440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_+_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
ENSMUSG00000117494.2_12888385_12996440_2	chr18	+	2484	14	Genic_Genomic	ENSMUSG00000117494.2	novel	2858	1	NA	NA	-107101	-1903	multi-exon	FALSE	non_canonical	0	0	junction_1	0	216	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTTTTAGAAGGCAGT	NA	False	NA	NA	False	GATAAA	-11	NA	12888384	12996440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_+_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996405
ENSMUSG00000117494.2_12889249_12996440_1	chr18	+	1734	13	Genic_Genomic	ENSMUSG00000117494.2	novel	2858	1	NA	NA	-106237	-1903	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTTTTAGAAGGCAGT	NA	False	NA	NA	False	GATAAA	-11	NA	12889248	12996440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_+_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12996128
ENSMUSG00000117494.2_12889249_12996440_2	chr18	+	1620	14	Genic_Genomic	ENSMUSG00000117494.2	novel	2858	1	NA	NA	-106237	-1903	multi-exon	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTTTTAGAAGGCAGT	NA	False	NA	NA	False	GATAAA	-11	NA	12889248	12996440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_+_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996405
ENSMUSG00000117494.2_12889249_12996440_3	chr18	+	1897	14	Genic_Genomic	ENSMUSG00000117494.2	novel	2858	1	NA	NA	-106237	-1903	multi-exon	FALSE	non_canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTTTTAGAAGGCAGT	NA	False	NA	NA	False	GATAAA	-11	NA	12889248	12996440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_+_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
ENSMUSG00000117710.2_5158352_5168326_1	chr19	+	2366	16	Genic_Genomic	ENSMUSG00000117710.2	novel	1292	1	NA	NA	-9714	-1031	multi-exon	FALSE	non_canonical	0	0	junction_1	0	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCCGCCTTAAAGGTGAAG	NA	False	NA	NA	False	NA	NA	NA	5158351	5168326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr19_+_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167498_5168149
ENSMUSG00000117783.2_83377156_83386534_1	chr18	+	961	5	NNC	ENSMUSG00000117783.2	novel	937	6	NA	NA	3446	264	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	3.57071421427143	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTTCCTATATTTAATT	NA	False	NA	NA	False	ATTAAA	-18	NA	83377155	83386534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_+_83377264_83381662_83381799_83385018_83385238_83385879_83385988_83386144
ENSMUSG00000117869.2_35686465_35691267_1	chr18	+	1047	4	FSM	ENSMUSG00000117869.2	ENSMUST00000235679.2	1190	4	41	102	0	-102	multi-exon	FALSE	canonical	3	167	junction_1	16.2685791225499	2184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTTATGTGTAGGT	NA	False	NA	NA	False	NA	NA	NA	35686464	35691267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389
ENSMUSG00000117916.2_27454049_27461633_1	chr17	-	736	3	NNC	ENSMUSG00000117916.2	novel	2149	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_1	34.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTCCGACTTGGGTT	6249	False	NA	-9	True	NA	NA	NA	27461633	27454048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr17_-_27454490_27455902_27456112_27461547
ENSMUSG00000118030.2_35695270_35723860_1	chr18	-	3175	15	NIC	ENSMUSG00000118030.2	novel	363	2	NA	NA	7766	22302	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAACGGCGCTGGCAGGAG	NA	False	NA	NA	False	NA	NA	NA	35723860	35695269	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUSG00000118030.2_35695270_35724476_1	chr18	-	3791	15	NIC	ENSMUSG00000118030.2	novel	363	2	NA	NA	7150	22302	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1432	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAACGGCGCTGGCAGGAG	NA	False	NA	NA	False	NA	NA	NA	35724476	35695269	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUSG00000118038.2_29044747_29046922_1	chr19	+	766	2	NNC	ENSMUSG00000118038.2	novel	618	2	NA	NA	0	19	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTATTAGCTGGCTAGA	NA	False	NA	NA	False	NA	NA	NA	29044746	29046922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_29044983_29046392
ENSMUSG00000118038.2_29044747_29046922_2	chr19	+	842	2	NNC	ENSMUSG00000118038.2	novel	618	2	NA	NA	0	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTATTAGCTGGCTAGA	NA	False	NA	NA	False	NA	NA	NA	29044746	29046922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_+_29044983_29046316
ENSMUSG00000118057.2_82356482_82358117_1	chr18	-	342	2	NNC	ENSMUSG00000118057.2	novel	3579	4	NA	NA	21608	-2107	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTGCTTTCTGATGGGC	NA	False	NA	NA	False	NA	NA	NA	82358117	82356481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_82356739_82358032
ENSMUSG00000118057.2_82356482_82358117_2	chr18	-	1075	2	NNC	ENSMUSG00000118057.2	novel	3579	4	NA	NA	21608	-2107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2927	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTGCTTTCTGATGGGC	NA	False	NA	NA	False	NA	NA	NA	82358117	82356481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_82357333_82357893
ENSMUSG00000118057.2_82356482_82358117_3	chr18	-	208	2	NNC	ENSMUSG00000118057.2	novel	3579	4	NA	NA	21608	-2107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTGCTTTCTGATGGGC	NA	False	NA	NA	False	NA	NA	NA	82358117	82356481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_82356582_82358009
ENSMUSG00000118057.2_82356482_82358117_4	chr18	-	431	2	NNC	ENSMUSG00000118057.2	novel	3579	4	NA	NA	21608	-2107	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1025	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTGCTTTCTGATGGGC	NA	False	NA	NA	False	NA	NA	NA	82358117	82356481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_82356716_82357920
ENSMUSG00000118057.2_82356482_82358117_5	chr18	-	373	2	NNC	ENSMUSG00000118057.2	novel	3579	4	NA	NA	21608	-2107	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTGCTTTCTGATGGGC	NA	False	NA	NA	False	NA	NA	NA	82358117	82356481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_82356739_82358001
ENSMUSG00000118057.2_82356482_82358117_6	chr18	-	184	2	NNC	ENSMUSG00000118057.2	novel	3579	4	NA	NA	21608	-2107	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTGCTTTCTGATGGGC	NA	False	NA	NA	False	NA	NA	NA	82358117	82356481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr18_-_82356545_82357996
ENSMUSG00000118081.2_31605228_31695133_1	chr17	-	1894	19	Genic_Genomic	ENSMUSG00000118081.2	novel	1107	2	NA	NA	-14324	60236	multi-exon	FALSE	non_canonical	0	0	junction_1	0	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTCGCCGCGGCCGCC	NA	False	NA	NA	False	NA	NA	NA	31695133	31605227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_-_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694898
ENSMUSG00000118081.2_31605228_31695284_1	chr17	-	2045	19	Genic_Genomic	ENSMUSG00000118081.2	novel	1107	2	NA	NA	-14475	60236	multi-exon	FALSE	non_canonical	0	0	junction_1	0	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTCGCCGCGGCCGCC	NA	False	NA	NA	False	NA	NA	NA	31695284	31605227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_-_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694898
ENSMUSG00000118134.2_67908045_67926672_1	chr18	-	1552	9	Genic_Genomic	ENSMUSG00000118134.2	novel	585	4	NA	NA	6341	1058	multi-exon	FALSE	non_canonical	0	0	junction_1	0	195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCGGTGCGGCCCGCAGC	NA	False	NA	NA	False	NA	NA	NA	67926672	67908044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_-_67908191_67912274_67912326_67916984_67917132_67917962_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ENSMUSG00000118134.2_67908045_67926672_2	chr18	-	1550	9	Genic_Genomic	ENSMUSG00000118134.2	novel	585	4	NA	NA	6341	1058	multi-exon	FALSE	non_canonical	0	0	junction_1	0	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCGGTGCGGCCCGCAGC	NA	False	NA	NA	False	NA	NA	NA	67926672	67908044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_-_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922560_67924933_67925085_67926219
ENSMUSG00000118134.2_67908045_67926672_3	chr18	-	1507	8	Genic_Genomic	ENSMUSG00000118134.2	novel	585	4	NA	NA	6341	1058	multi-exon	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCGGTGCGGCCCGCAGC	NA	False	NA	NA	False	NA	NA	NA	67926672	67908044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_-_67908191_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ENSMUSG00000118243.2_5323960_5345450_1	chr19	+	3816	20	Genic_Genomic	ENSMUSG00000118243.2	novel	833	1	NA	NA	-21264	-606	multi-exon	TRUE	non_canonical	0	0	junction_1	0	753	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGAAGCTCGGGTCAGCCG	NA	False	NA	NA	False	NA	NA	NA	5323959	5345450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr19_+_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ENSMUSG00000118243.2_5323960_5345450_2	chr19	+	3183	21	Genic_Genomic	ENSMUSG00000118243.2	novel	833	1	NA	NA	-21264	-606	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3413	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGAAGCTCGGGTCAGCCG	NA	False	NA	NA	False	NA	NA	NA	5323959	5345450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr19_+_5324550_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ENSMUSG00000118243.2_5323960_5345450_3	chr19	+	3189	21	Genic_Genomic	ENSMUSG00000118243.2	novel	833	1	NA	NA	-21264	-606	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGAAGCTCGGGTCAGCCG	NA	False	NA	NA	False	NA	NA	NA	5323959	5345450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr19_+_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ENSMUSG00000118295.2_31515189_31569683_1	chr17	-	3371	20	Genic_Genomic	ENSMUSG00000118295.2	novel	2938	1	NA	NA	-54020	-2463	multi-exon	FALSE	non_canonical	0	0	junction_1	0	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGAGCGGCCGCCCTT	NA	False	NA	NA	False	NA	NA	NA	31569683	31515188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_-_31515890_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ENSMUSG00000118346.2_8749890_8751817_1	chr19	-	695	4	NIC	ENSMUSG00000118346.2	novel	818	5	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	96.6885032807245	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATGGATTTCTTGATG	5088	False	NA	-5	True	AATATA	-16	NA	8751817	8749889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_8750199_8750391_8750471_8750868_8751057_8751698
ENSMUSG00000118346.2_8749890_8751817_2	chr19	-	1023	4	NIC	ENSMUSG00000118346.2	novel	818	5	NA	NA	-8	0	intron_retention	FALSE	canonical	3	161	junction_3	44.0302926025556	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATGGATTTCTTGATG	5088	False	NA	-5	True	AATATA	-16	NA	8751817	8749889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_-_8750471_8750653_8750789_8750868_8751057_8751698
ENSMUSG00000118346.2_8749890_8751817_3	chr19	-	843	5	NNC	ENSMUSG00000118346.2	novel	818	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	105.570770102335	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATGGATTTCTTGATG	5088	False	NA	-5	True	AATATA	-16	NA	8751817	8749889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8751070_8751698
ENSMUSG00000118346.2_8749890_8751817_4	chr19	-	1735	2	ISM	ENSMUSG00000118346.2	ENSMUST00000235756.2	499	3	-8	0	-8	0	intron_retention	FALSE	canonical	3	253	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATGGATTTCTTGATG	5088	False	NA	-5	True	AATATA	-16	NA	8751817	8749889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	ISM_chr19_-_8750199_8750391
ENSMUSG00000118382.2_30812840_30831596_1	chr17	+	886	6	Genic_Genomic	ENSMUSG00000118382.2	novel	2107	1	NA	NA	-9239	7411	multi-exon	FALSE	non_canonical	0	0	junction_1	0	237	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGACGCCTTTGCAGTCG	NA	False	NA	NA	False	NA	NA	NA	30812839	30831596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_+_30813189_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ENSMUSG00000118382.2_30812840_30831596_2	chr17	+	889	6	Genic_Genomic	ENSMUSG00000118382.2	novel	2107	1	NA	NA	-9239	7411	multi-exon	FALSE	non_canonical	0	0	junction_1	0	340	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGACGCCTTTGCAGTCG	NA	False	NA	NA	False	NA	NA	NA	30812839	30831596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_+_30813201_30815347_30815438_30816787_30816847_30819012_30819154_30822993_30823077_30831441
ENSMUSG00000118386.2_35399449_35631947_1	chr18	+	1668	10	Genic_Genomic	ENSMUSG00000118386.2	novel	478	2	NA	NA	-232265	-399	multi-exon	FALSE	non_canonical	0	0	junction_1	0	600	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCTGAAGGCGCGTGGC	NA	False	NA	NA	False	NA	NA	NA	35399448	35631947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_+_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
ENSMUSG00000118386.2_35473577_35631947_1	chr18	+	828	6	Genic_Genomic	ENSMUSG00000118386.2	novel	478	2	NA	NA	-158137	-399	multi-exon	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCTGAAGGCGCGTGGC	NA	False	NA	NA	False	NA	NA	NA	35473576	35631947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr18_+_35473827_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
ENSMUSG00000118403.2_119209443_119272676_1	chr4	+	1826	9	NIC	ENSMUSG00000118403.2	novel	855	3	NA	NA	-41254	15555	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCAGCCGCCCAGCCGC	NA	False	NA	NA	False	NA	NA	NA	119209442	119272676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr4_+_119209850_119210266_119210422_119213834_119214045_119216754_119216935_119250738_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
ENSMUSG00000118504.2_89960121_89973376_1	chr3	+	2018	10	NNC	ENSMUSG00000118504.2	novel	1545	10	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	189.742580654897	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTAGGCCACAGGGCTT	NA	False	NA	15	True	AAAAAG	-4	NA	89960120	89973376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944_89969426_89970515_89970557_89971731_89971862_89972816
ENSMUSG00000118666.1_66427983_66439269_1	chr13	-	2622	5	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7304	967	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	30.4415423393756	1146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	1890	False	NA	-1	True	NA	NA	NA	66439269	66427982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_66429686_66429768_66430404_66431569_66431631_66431830_66431958_66439173
ENSMUSG00000118666.1_66427983_66439269_2	chr13	-	2620	5	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7304	967	intron_retention	TRUE	canonical	0	0	junction_1	30.4415423393756	1132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	1890	False	NA	-1	True	NA	NA	NA	66439269	66427982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_66429660_66429744_66430404_66431569_66431631_66431830_66431958_66439173
ENSMUSG00000118666.1_66428319_66439269_2	chr13	-	2286	5	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7304	631	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.4415423393756	497	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAAAAGAACACATAATG	1890	False	NA	NA	False	NA	NA	NA	66439269	66428318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_66429686_66429768_66430404_66431569_66431631_66431830_66431958_66439173
ENSMUSG00000118666.1_66428950_66439269_1	chr13	-	1655	5	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7304	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.4415423393756	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATCAGTGTTGTAAAGCA	1890	False	NA	NA	False	NA	NA	NA	66439269	66428949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_66429686_66429768_66430404_66431569_66431631_66431830_66431958_66439173
ENSMUSG00000118666.1_66431304_66439269_1	chr13	-	550	3	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7304	-2354	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_1	7.5	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTCTGTATAGTCTCATA	1890	False	NA	NA	False	NA	NA	NA	66439269	66431303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_chr13_-_66431631_66431830_66431958_66439173
ENSMUSG00000118669.2_18225636_18245135_1	chr16	+	1608	7	Fusion	ENSMUSG00000118669.2_ENSMUSG00000075704.18	novel	4232	17	NA	NA	3390	-11425	multi-exon	FALSE	non_canonical	0	0	junction_1	0	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCGCGGACGCTCAGGCA	7739	False	NA	NA	False	NA	NA	NA	18225635	18245135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr16_+_18226051_18226278_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ENSMUSG00000118669.2_18225636_18245135_2	chr16	+	1597	7	Fusion	ENSMUSG00000118669.2_ENSMUSG00000075704.18	novel	4232	17	NA	NA	3390	-11425	multi-exon	FALSE	non_canonical	0	0	junction_1	0	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCGCGGACGCTCAGGCA	7739	False	NA	NA	False	NA	NA	NA	18225635	18245135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr16_+_18226039_18226277_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ENSMUSG00000118669.2_18225636_18245135_3	chr16	+	1549	6	Fusion	ENSMUSG00000118669.2_ENSMUSG00000075704.18	novel	4232	17	NA	NA	3390	-11425	multi-exon	FALSE	non_canonical	0	0	junction_2	5.6	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCGCGGACGCTCAGGCA	7739	False	NA	NA	False	NA	NA	NA	18225635	18245135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr16_+_18226049_18226278_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18245105
ENSMUSG00000118669.2_18225636_18245135_4	chr16	+	1595	7	Fusion	ENSMUSG00000118669.2_ENSMUSG00000075704.18	novel	4232	17	NA	NA	3390	-11425	multi-exon	TRUE	non_canonical	0	0	junction_1	0	258	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCGCGGACGCTCAGGCA	7739	False	NA	NA	False	NA	NA	NA	18225635	18245135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr16_+_18226054_18226294_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ENSMUSG00000118669.2_18225636_18245239_1	chr16	+	1699	7	Fusion	ENSMUSG00000118669.2_ENSMUSG00000075704.18	novel	532	4	NA	NA	3390	-11321	multi-exon	FALSE	non_canonical	0	0	junction_1	0	458	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCGCTTCCGGCCGCG	7739	False	NA	NA	False	NA	NA	NA	18225635	18245239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr16_+_18226054_18226294_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ENSMUSG00000118669.2_18225636_18245354_1	chr16	+	1768	6	Fusion	ENSMUSG00000118669.2_ENSMUSG00000075704.18	novel	532	4	NA	NA	3390	-11206	multi-exon	FALSE	non_canonical	0	0	junction_2	5.6	285	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTCCACAGGGGGTCGC	7739	False	NA	NA	False	NA	NA	NA	18225635	18245354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr16_+_18226049_18226278_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18245105
ENSMUSG00000118669.2_18225636_18245354_3	chr16	+	1816	7	Fusion	ENSMUSG00000118669.2_ENSMUSG00000075704.18	novel	532	4	NA	NA	3390	-11206	multi-exon	FALSE	non_canonical	0	0	junction_1	0	345	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTCCACAGGGGGTCGC	7739	False	NA	NA	False	NA	NA	NA	18225635	18245354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr16_+_18226039_18226277_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ENSMUSG00002075511.1_100568381_100577374_1	chr5	+	926	5	Genic_Genomic	ENSMUSG00002075511.1_ENSMUSG00002076301.1_ENSMUSG00002075475.1	novel	179	1	NA	NA	-1446	8	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGAGAACGTGCCCACGG	NA	False	NA	NA	False	NA	NA	NA	100568380	100577374	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100577184
ENSMUSG00002075511.1_100568701_100577374_1	chr5	+	606	5	Genic_Genomic	ENSMUSG00002075511.1_ENSMUSG00002076301.1_ENSMUSG00002075475.1	novel	179	1	NA	NA	-1126	8	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1918	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGAGAACGTGCCCACGG	NA	False	NA	NA	False	NA	NA	NA	100568700	100577374	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr5_+_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100577184
ENSMUSG00002075873.1_29779837_29821758_1	chr2	-	3797	21	Genic_Genomic	ENSMUSG00002075873.1	novel	97	1	NA	NA	-223	41602	multi-exon	FALSE	non_canonical	0	0	junction_1	0	863	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTCCCGCGGCGGCTCCT	5277	False	NA	NA	False	NA	NA	NA	29821758	29779836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ENSMUSG00002075873.1_29779837_29821758_2	chr2	-	3586	20	Genic_Genomic	ENSMUSG00002075873.1	novel	97	1	NA	NA	-223	41602	multi-exon	FALSE	non_canonical	0	0	junction_1	0	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTCCCGCGGCGGCTCCT	5277	False	NA	NA	False	NA	NA	NA	29821758	29779836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr2_-_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ENSMUSG00002076029.1_37269484_37276515_1	chr17	-	971	3	Genic_Genomic	ENSMUSG00002076029.1	novel	76	1	NA	NA	-1191	5765	multi-exon	FALSE	non_canonical	0	0	junction_1	0	772	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCAACGGCCACCAGGAC	NA	False	NA	NA	False	NA	NA	NA	37276515	37269483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_-_37269589_37275248_37275325_37275725
ENSMUSG00002076029.1_37269533_37276515_1	chr17	-	1021	3	Genic_Genomic	ENSMUSG00002076029.1	novel	76	1	NA	NA	-1191	5716	multi-exon	FALSE	non_canonical	0	0	junction_1	0	681	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGGCTTAAACTGCCTCC	NA	False	NA	NA	False	NA	NA	NA	37276515	37269532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr17_-_37269688_37275248_37275325_37275725
ENSMUSG00002076244.1_61869748_61886211_1	chr14	+	493	4	Genic_Genomic	ENSMUSG00002075420.1_ENSMUSG00002076244.1	novel	85	1	NA	NA	-11072	-12	multi-exon	FALSE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCAGGCATCACTCGAAA	8067	False	NA	NA	False	NA	NA	NA	61869747	61886211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr14_+_61869933_61872973_61873041_61880808_61880905_61886066
ENSMUSG00002076463.1_51989870_52013441_1	chr11	-	1576	7	Genic_Genomic	ENSMUSG00002076463.1	novel	111	1	NA	NA	-23461	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGCCCGAACCGGCTGCC	NA	False	NA	NA	False	NA	NA	NA	52013441	51989869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_-_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ENSMUSG00002076463.1_51989870_52013566_1	chr11	-	1701	7	Genic_Genomic	ENSMUSG00002076463.1	novel	111	1	NA	NA	-23586	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	812	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGCCCGAACCGGCTGCC	NA	False	NA	NA	False	NA	NA	NA	52013566	51989869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_-_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ENSMUST00000000001.5	chr3	-	3262	9	FSM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_4	42.0652395095998	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTTTTATTTGTCTTG	NA	False	NA	-10	True	ATTAAA	-32	NA	108053462	108014595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
ENSMUST00000000028.14	chr16	-	2143	20	FSM	ENSMUSG00000000028.16	ENSMUST00000000028.14	2143	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	120.274616521947	2287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCTGTGATCTTATT	NA	False	NA	-2	True	AATAAA	-21	NA	18630722	18599196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264_18630460_18630553
ENSMUST00000000080.8	chr13	+	4225	4	FSM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	9.7410927974683	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGCCTGATTGTTTTT	NA	False	NA	8	True	CATAAA	-18	NA	5911480	5920393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_5911842_5914766_5915344_5916637_5916762_5917230
ENSMUST00000000087.13	chr4	+	3353	17	FSM	ENSMUSG00000000085.17	ENSMUST00000000087.13	3353	17	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_13	8.94776508408664	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTGTCTTTTTAACCAG	NA	False	NA	12	True	AATAAA	-14	NA	120262503	120387381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
ENSMUST00000000090.8	chr9	+	645	5	FSM	ENSMUSG00000000088.8	ENSMUST00000000090.8	645	5	0	0	0	0	multi-exon	FALSE	canonical	3	7868	junction_4	746.021908190369	22413	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGGTCTTGTGATGTTGT	377	False	NA	22	True	AATAAA	-22	NA	57428561	57439709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_57428699_57436238_57436356_57437523_57437646_57438951_57439076_57439564
ENSMUST00000000122.7	chr11	-	3446	6	FSM	ENSMUSG00000000120.7	ENSMUST00000000122.7	3446	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	5.88557558782486	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACGATGCCAAGAGAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	95478561	95459643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_95461922_95462645_95462807_95465016_95465270_95468799_95469160_95471778_95471921_95478309
ENSMUST00000000137.8	chr11	-	3631	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	1648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATTTTGTCTTTTTCT	1336	False	NA	-4	True	AATAAA	-19	NA	20062913	20012303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ENSMUST00000000175.6	chr9	-	1231	4	FSM	ENSMUSG00000000171.6	ENSMUST00000000175.6	1231	4	0	0	0	0	multi-exon	FALSE	canonical	3	1351	junction_3	46.783187863448	5593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTATATAATGAAAATACAT	NA	False	NA	NA	False	AATAAA	-3	NA	50515112	50507656	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_50508551_50510060_50510206_50511847_50511965_50515037
ENSMUST00000000260.13	chr13	+	1580	9	FSM	ENSMUSG00000000253.14	ENSMUST00000000260.13	1580	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	10.0428768288773	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGCTGGAGTTTGCGT	NA	False	NA	22	True	AATATA	-16	NA	45660919	45699858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
ENSMUST00000000284.7	chr11	+	5566	8	FSM	ENSMUSG00000000275.17	ENSMUST00000000284.7	5566	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	189.00091782522	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACATTGTCCTGCCTTTTG	NA	False	NA	24	True	NA	NA	NA	88890201	88911119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88906358_88906458_88906544_88906644_88907020
ENSMUST00000000287.9	chr11	+	2097	13	Genic_Genomic	ENSMUSG00000087338.3	novel	811	5	NA	NA	18092	19404	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9011	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCCCTGACACTCCT	NA	False	NA	NA	False	NA	NA	NA	88814845	88846291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr11_+_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ENSMUST00000000304.14	chr10	+	858	6	FSM	ENSMUSG00000000295.14	ENSMUST00000000304.14	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_4	15.6025638918737	2288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTGTCTTCTGTTTTGC	NA	False	NA	20	True	ATTAAA	-27	NA	31189378	31204200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_31189480_31190510_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
ENSMUST00000000305.7	chr10	-	1308	7	FSM	ENSMUSG00000000296.9	ENSMUST00000000305.7	1308	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	224.403654159196	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGGATCTTTTATTTC	NA	False	NA	-3	True	ATTAAA	-17	NA	31321954	31208371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_31208966_31214180_31214242_31217135_31217175_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ENSMUST00000000312.12	chr8	+	4430	16	FSM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_8	93.5918799896658	2231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5049	False	NA	26	True	ATTAAA	-18	NA	107329982	107396878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ENSMUST00000000317.13	chr2	+	1620	9	FSM	ENSMUSG00000000308.15	ENSMUST00000000317.13	1620	9	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_3	17.8881070826401	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGTGTTATTTCTAT	1635	False	NA	32	True	AGTAAA	-20	NA	121189090	121194218	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
ENSMUST00000000349.11	chr3	+	3301	11	FSM	ENSMUSG00000000340.11	ENSMUST00000000349.11	3301	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_7	26.1091937830336	411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATGCCTTCATAGTA	NA	False	NA	10	True	AATAAA	-19	NA	116306718	116343630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_116306841_116313885_116314010_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
ENSMUST00000000356.10	chr15	+	2135	4	FSM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	569.007518013212	1920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGCATTCTTTACTTAG	NA	False	NA	18	True	AATAAA	-25	NA	100513229	100518642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248
ENSMUST00000000365.3	chrX	-	783	6	Antisense	novelGene_ENSMUSG00000000355.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1764	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCGGAAGGCGAAAACAC	NA	False	NA	NA	False	NA	NA	NA	37702303	37689531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chrX_-_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
ENSMUST00000000388.15	chr11	+	1858	10	FSM	ENSMUSG00000000378.16	ENSMUST00000000388.15	1858	10	0	0	0	0	multi-exon	TRUE	canonical	3	315	junction_9	41.5204843093617	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTTGTCAAGCATTT	NA	False	NA	15	True	AAAACA	-27	NA	6496886	6546744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUST00000000394.14	chr11	-	2290	12	FSM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_8	40.423788103394	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTATCTTCCCAGGCT	NA	False	NA	-27	True	AATAAA	-19	NA	6576043	6566422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ENSMUST00000000412.3	chrX	-	2704	12	FSM	ENSMUSG00000000402.3	ENSMUST00000000412.3	2704	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	3.09892009982897	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGTTGAAACACTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	165368716	165306002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_165306968_165310309_165310576_165314967_165315070_165319195_165319277_165321409_165321731_165329416_165329540_165331818_165331954_165335420_165335541_165339965_165340086_165345937_165346031_165351404_165351518_165368451
ENSMUST00000000451.14	chr6	-	3070	17	FSM	ENSMUSG00000000441.18	ENSMUST00000000451.14	3070	17	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_8	72.4119076878934	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGTGCAGTTTCTTGT	8144	False	NA	0	True	AATAAA	-43	NA	115653596	115595529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ENSMUST00000000466.13	chr4	-	1888	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_2	61.6944412539141	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTATGTTGTTACATGT	NA	False	NA	NA	False	AAGAAA	-42	NA	86588297	86574801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
ENSMUST00000000544.12	chr15	+	4418	9	FSM	ENSMUSG00000000532.12	ENSMUST00000000544.12	4418	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	3.66571957465379	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGATCCCGTCTGCCTT	NA	False	NA	21	True	ATTAAA	-18	NA	101071947	101111565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_101072117_101091812_101092053_101092689_101092939_101096664_101096896_101099858_101100027_101100818_101100976_101102333_101102459_101106960_101107092_101108617
ENSMUST00000000590.16	chr9	+	4380	14	FSM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_13	85.8483594974439	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTGGAGGTCCGCTGTT	NA	False	NA	15	True	AATAAA	-15	NA	51959414	52000029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ENSMUST00000000642.11	chr6	-	5513	18	FSM	ENSMUSG00000000628.11	ENSMUST00000000642.11	5513	18	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_14	56.0328005768445	1832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGTGTGTGATTGGAT	9398	False	NA	-1	True	AATAAA	-23	NA	82751435	82702005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
ENSMUST00000000696.7	chr4	-	514	2	FSM	ENSMUSG00000000682.8	ENSMUST00000000696.7	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCCCACGTGTGATCG	NA	False	NA	-3	True	AATAAA	-19	NA	133822393	133820846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_133821212_133822244
ENSMUST00000000727.4	chr10	-	3180	6	FSM	ENSMUSG00000000711.4	ENSMUST00000000727.4	3180	6	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_5	17.0528589978338	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACTGGACTGTTGTTTT	NA	False	NA	NA	False	AGTAAA	-16	NA	128532133	128513043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128532054
ENSMUST00000000746.12	chr10	+	1676	13	FSM	ENSMUSG00000000730.14	ENSMUST00000000746.12	1676	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	3.51484945149386	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTCTGGTGTGGTGTGTG	5591	False	NA	29	True	AATATA	-21	NA	77885675	77899456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_77885746_77885849_77886038_77886431_77886519_77886749_77886795_77887664_77887745_77887825_77887939_77888545_77888718_77889762_77889851_77890805_77890901_77892678_77892755_77893101_77893242_77895480_77895567_77899020
ENSMUST00000000756.6	chr8	-	780	6	Antisense	novelGene_ENSMUSG00000098550.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	139807	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGCGAAAGGGAAGTGAC	NA	False	NA	NA	False	NA	NA	NA	123831983	123829088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr8_-_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
ENSMUST00000000759.9	chr8	-	2140	7	FSM	ENSMUSG00000000743.10	ENSMUST00000000759.9	2140	7	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_1	74.3544439380279	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCAGACTTTTTTTTTT	9745	False	NA	-4	True	AATAAA	-16	NA	123939499	123931002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935838_123936954_123936975_123939404
ENSMUST00000000767.6	chr11	-	2942	18	FSM	ENSMUSG00000000751.14	ENSMUST00000000767.6	2942	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	554.797565874568	3546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCTTTGACTGTAAAG	NA	False	NA	-16	True	AATAAA	-21	NA	75239136	75191175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75230538_75230602_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ENSMUST00000000776.15	chr8	-	3797	22	FSM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_11	12.9206544206397	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATGTGGTTTCTGAA	NA	False	NA	1	True	ATTAAA	-18	NA	12722248	12664276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ENSMUST00000000895.13	chr2	-	1829	13	FSM	ENSMUSG00000027489.16	ENSMUST00000000895.13	1829	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	10.0840220150494	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCCCCTGTCTCT	7311	False	NA	-15	True	AATAAA	-24	NA	154400786	154386318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388801_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
ENSMUST00000000904.15	chr16	+	1412	8	FSM	ENSMUSG00000000884.18	ENSMUST00000000904.15	1412	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	116.273604143022	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTCAAGGTGGGAACTT	NA	False	NA	17	True	AATAAA	-19	NA	18317533	18383292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18317602_18317795_18317891_18359184_18359326_18359721_18359848_18362864_18363024_18366842_18366942_18371116_18371333_18382784
ENSMUST00000000924.13	chr10	-	2288	8	FSM	ENSMUSG00000000901.18	ENSMUST00000000924.13	2288	8	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	14.5349683908307	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	5056	False	NA	-3	True	ATTAAA	-17	NA	75768336	75759055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ENSMUST00000000925.10	chr10	-	1660	9	FSM	ENSMUSG00000000902.14	ENSMUST00000000925.10	1660	9	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_7	283.203990084886	4260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTAGCATAAAACTG	6861	False	NA	-2	True	AATAAA	-20	NA	75757451	75732602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752606_75752746_75757136
ENSMUST00000000940.15	chr5	+	2243	10	FSM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_9	22.1966519552993	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATGTTTAAATATTT	NA	False	NA	NA	False	AATAAA	-12	NA	135398806	135405652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ENSMUST00000000958.9	chr15	-	1903	14	FSM	ENSMUSG00000000934.10	ENSMUST00000000958.9	1903	14	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	11.6872458678823	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTGTCACTGTGAC	NA	False	NA	-7	True	AATAAA	-11	NA	75550649	75528883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75529064_75529532_75529680_75535204_75535300_75535863_75535992_75537435_75537551_75538101_75538171_75539268_75539455_75539670_75539815_75540474_75540620_75541135_75541324_75541910_75542034_75546140_75546263_75547867_75547981_75550501
ENSMUST00000000964.6	chr6	-	2251	2	FSM	ENSMUSG00000029844.10	ENSMUST00000000964.6	2251	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTAAGCATCTTGTGTA	NA	False	NA	-6	True	AATAAA	-19	NA	52135297	52132569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_52134070_52134546
ENSMUST00000000985.7	chr14	+	2538	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_4	29.1475598792348	2704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTTCAGAGTTGAAGCT	NA	False	NA	NA	False	AATAAA	-21	NA	54598297	54607130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ENSMUST00000001036.11	chr9	-	4619	23	FSM	ENSMUSG00000032175.12	ENSMUST00000001036.11	4619	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_20	22.0371587015287	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGTTGCTTGCATT	NA	False	NA	-3	True	NA	NA	NA	21038642	21015364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035506_21035706_21035855_21036159_21036278_21038419
ENSMUST00000001042.10	chr3	+	2027	14	FSM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	0	0	0	0	multi-exon	FALSE	canonical	3	1252	junction_8	67.3276893371464	4538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTACAAGCATTTATTTA	NA	False	NA	18	True	AATAAA	-23	NA	90383453	90395686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ENSMUST00000001043.14	chr3	-	3257	5	FSM	ENSMUSG00000001017.16	ENSMUST00000001043.14	3257	5	0	0	0	0	multi-exon	TRUE	canonical	3	892	junction_3	258.017804618208	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	-1	True	NA	NA	NA	90416758	90406262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90414934_90416497
ENSMUST00000001063.15	chr11	-	4243	10	FSM	ENSMUSG00000001036.18	ENSMUST00000001063.15	4243	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	113.072029921715	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470511	61408074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61470392
ENSMUST00000001080.16	chr11	-	2367	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGAGGAATGTTATTC	NA	False	NA	0	True	AATATA	-32	NA	51541669	51533889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
ENSMUST00000001081.10	chr11	-	1946	10	FSM	ENSMUSG00000001054.10	ENSMUST00000001081.10	1946	10	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	13.1581078605222	636	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATGATTGCATGGTCTT	NA	False	NA	-9	True	AATATA	-19	NA	51526723	51514499	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
ENSMUST00000001083.4	chr11	+	825	3	FSM	ENSMUSG00000001056.4	ENSMUST00000001083.4	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	5400	junction_2	19.5	17888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTGGCAAGTGTGTGG	NA	False	NA	16	True	AGTAAA	-11	NA	51510597	51514256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_51510979_51513311_51513418_51513918
ENSMUST00000001109.11	chr5	-	1907	13	FSM	ENSMUSG00000001082.13	ENSMUST00000001109.11	1907	13	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_12	65.1670929227321	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTCTTACTATTCTTT	NA	False	NA	0	True	AATAAA	-24	NA	34794533	34790985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
ENSMUST00000001126.4	chr11	+	1978	5	FSM	ENSMUSG00000020829.10	ENSMUST00000001126.4	1978	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	12.7549010188241	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTTTGGGGCTTTCTG	8337	False	NA	26	True	AGTAAA	-27	NA	78356522	78362771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78356832_78357176_78358030_78359450_78359535_78361520_78361678_78362196
ENSMUST00000001127.11	chr11	+	2054	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	0	0	0	0	multi-exon	FALSE	canonical	3	1074	junction_9	50.3904752904753	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1635	False	NA	18	True	ATTAAA	-15	NA	78403018	78413562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ENSMUST00000001155.11	chrX	+	2358	16	FSM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	0	0	0	0	multi-exon	FALSE	non_canonical	1	66	junction_12	87.7031356337959	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	6273	False	NA	23	True	NA	NA	NA	20714781	20726758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ENSMUST00000001156.8	chrX	-	1636	9	FSM	ENSMUSG00000001128.8	ENSMUST00000001156.8	1636	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	23.4837044564949	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATAATATTGTGAAATAT	NA	False	NA	73	True	AATAGA	-13	NA	20797794	20791692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_20791999_20793519_20793632_20793773_20793963_20794191_20794366_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20797542_20797629
ENSMUST00000001171.13	chr1	-	2174	7	FSM	ENSMUSG00000001143.14	ENSMUST00000001171.13	2174	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	67.569717082926	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCTGGCTCAGTGGCC	NA	False	NA	-3	True	CATAAA	-21	NA	36484352	36462266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36478689_36478808_36482571_36482691_36484130
ENSMUST00000001186.11	chr6	-	885	6	FSM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	1763	junction_5	100.541732628794	5797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGACTTGTTTTGTTT	7646	False	NA	1	True	ATTAAA	-29	NA	86661504	86652132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
ENSMUST00000001187.15	chr6	-	2002	13	FSM	ENSMUSG00000029994.18	ENSMUST00000001187.15	2002	13	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	17.8737858950537	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATTCTTTCTCTGAT	4606	False	NA	-2	True	ATTAAA	-18	NA	86770566	86713822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
ENSMUST00000001242.9	chr10	-	1378	7	FSM	ENSMUSG00000053329.8	ENSMUST00000001242.9	1378	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	5.05799696849784	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGTCTCAGGCCTTGTG	4131	False	NA	-2	True	AATAAA	-29	NA	78005616	77997899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_77998553_77999230_77999388_78000671_78000765_78003228_78003349_78004642_78004757_78005206_78005260_78005428
ENSMUST00000001247.12	chr5	+	1600	10	FSM	ENSMUSG00000029130.13	ENSMUST00000001247.12	1600	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	13.0421917418852	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTAGCTAGTGTCTGA	NA	False	NA	89	True	AATAAA	-19	NA	29400994	29430520	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_29401111_29401577_29401644_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411171_29411297_29411693_29411803_29429114_29429283_29430040
ENSMUST00000001258.15	chr17	+	3586	17	FSM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	0	0	0	0	multi-exon	FALSE	canonical	3	1413	junction_6	319.856779473251	3265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	420	False	NA	36	True	AATAAA	-20	NA	56610320	56630486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUST00000001304.9	chr12	-	1472	8	FSM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	0	0	0	0	multi-exon	FALSE	canonical	3	7551	junction_6	311.265160273359	48507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638772	111635794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
ENSMUST00000001331.13	chr15	+	981	6	FSM	ENSMUSG00000001285.13	ENSMUST00000001331.13	981	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	200.273213386114	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTATTCACCTCTAACTG	5968	False	NA	-1	True	NA	NA	NA	102240184	102246269	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245535_102245659_102245763_102245946_102246070
ENSMUST00000001335.7	chr15	+	570	5	FSM	ENSMUSG00000001289.13	ENSMUST00000001335.7	570	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	370.883741892254	1861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGGGGTGGTCTATTCT	407	False	NA	26	True	AATAAA	-14	NA	102234623	102239921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102234696_102234867_102234971_102236956_102237032_102237146_102237253_102239707
ENSMUST00000001339.6	chr1	-	1321	5	FSM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_3	58.7962583843564	1710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTATCTTTTCTATT	NA	False	NA	-30	True	CATAAA	-6	NA	186481555	186453174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472061_186481360
ENSMUST00000001402.14	chr9	-	1850	13	FSM	ENSMUSG00000001366.15	ENSMUST00000001402.14	1850	13	0	0	0	0	multi-exon	FALSE	non_canonical	2	18	junction_12	15.7920514464996	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTGTGGATGGCCTT	NA	False	NA	0	True	AATAAA	-28	NA	78016347	77988783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78002426_78002542_78003149_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78016283
ENSMUST00000001416.8	chr18	-	1989	13	FSM	ENSMUSG00000001380.8	ENSMUST00000001416.8	1989	13	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_8	68.8118913334671	2001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTGTGTCCTTGATGC	NA	False	NA	-2	True	AATAAA	-16	NA	36916258	36899580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
ENSMUST00000001419.10	chr18	+	2310	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_5	81.4331627778266	4799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGACTTTTCTTTGAT	6616	False	NA	22	True	AATAAA	-22	NA	36926928	36932719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
ENSMUST00000001452.14	chr3	+	1977	14	FSM	ENSMUSG00000001416.14	ENSMUST00000001452.14	1977	14	0	0	0	0	multi-exon	FALSE	canonical	3	2266	junction_3	121.304155843285	12325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTGTCATGTGTTTTT	3804	False	NA	23	True	ATTAAA	-15	NA	88204422	88229074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ENSMUST00000001460.14	chr6	+	3482	24	FSM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_3	55.1049865830108	1486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGGAGCCAGAACACTG	-7	True	NA	30	True	AATAAA	-31	NA	28480346	28888831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ENSMUST00000001479.5	chr11	-	5894	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	0	0	0	0	multi-exon	TRUE	canonical	3	682	junction_21	133.681077140662	3578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGCTGCTTCGTTCTTT	NA	False	NA	-4	True	AATAAA	-25	NA	97078707	97050539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ENSMUST00000001485.10	chr11	+	1708	5	FSM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_1	35.8643276808586	2124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTATGTTTATATCTGTA	873	False	NA	10	True	NA	NA	NA	96932385	96940039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_96932479_96935353_96935524_96937855_96938021_96938238_96938384_96938904
ENSMUST00000001507.5	chr5	-	3931	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	1595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGATTTTCTTTGCCAAT	NA	False	NA	-22	True	ATTAAA	-22	NA	4154746	4131144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ENSMUST00000001513.8	chr18	+	1758	4	FSM	ENSMUSG00000001473.8	ENSMUST00000001513.8	1758	4	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_3	34.2928563989645	2089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGGTCTCTTGAACTTC	NA	False	NA	12	True	AATAAA	-14	NA	67523786	67535819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_67523885_67524394_67524504_67526015_67526127_67534379
ENSMUST00000001522.10	chr8	+	3214	13	FSM	ENSMUSG00000001482.16	ENSMUST00000001522.10	3214	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	97.6160278278567	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169724	124190009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124169791_124172836_124172924_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ENSMUST00000001559.11	chr6	-	2320	12	FSM	ENSMUSG00000001518.13	ENSMUST00000001559.11	2320	12	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_3	19.6628609101919	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTCTCCAATCTGGAC	NA	False	NA	0	True	AATAAA	-24	NA	128401894	128386406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ENSMUST00000001565.15	chr17	-	1679	14	FSM	ENSMUSG00000001524.15	ENSMUST00000001565.15	1679	14	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_8	17.8418429806661	673	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCGGCTTCAGACGTCTG	NA	False	NA	-1	True	AATAAA	-17	NA	35984631	35978621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
ENSMUST00000001566.10	chr17	-	2649	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	0	0	0	0	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	44091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGAGGCTGTGTGCTC	NA	False	NA	-7	True	AATAAA	-16	NA	36149198	36144812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
ENSMUST00000001569.15	chr17	+	1825	13	FSM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_8	11.7434970184448	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATACTTCTTTCCTCACT	NA	False	NA	25	True	ATTAAA	-23	NA	36134121	36143683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_36134394_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
ENSMUST00000001595.10	chr11	+	2584	10	FSM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	6.35959467611297	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTCCAGAAGTGGACAGA	NA	False	NA	13	True	AATAAA	-14	NA	100306522	100315650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100306852_100311225_100311372_100311716_100311907_100312019_100312166_100312469_100312660_100312769_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
ENSMUST00000001620.13	chr3	+	2459	17	FSM	ENSMUSG00000027680.16	ENSMUST00000001620.13	2459	17	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_14	394.615947591769	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTATTTTGTTTTCAA	4694	False	NA	17	True	ATTAAA	-20	NA	34074091	34123491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34119122_34119204_34122309_34122402_34123065
ENSMUST00000001626.10	chr11	-	2778	14	FSM	ENSMUSG00000001583.14	ENSMUST00000001626.10	2778	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	5.7316726185222	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGACACAGCCTCCTTC	9080	False	NA	-6	True	AAAAAG	-27	NA	69749556	69741830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743719_69743942_69744108_69744406_69744502_69745783_69746058_69746345_69746630_69746736_69746893_69747203_69747396_69747518_69747590_69747737_69747952_69749230_69749336_69749532
ENSMUST00000001631.7	chr11	-	2482	22	FSM	ENSMUSG00000001588.13	ENSMUST00000001631.7	2482	22	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_20	9.40183800238705	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCTTAGTTCATTTA	9573	False	NA	-6	True	ATTAAA	-15	NA	69786365	69772392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689_69781810_69785425_69785484_69786111
ENSMUST00000001675.14	chr6	+	4550	14	FSM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_10	10.7620855417108	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTGGGGTGTTTGTTTT	NA	False	NA	15	True	AATAAA	-20	NA	146626492	146680310	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ENSMUST00000001713.10	chr10	-	1037	5	FSM	ENSMUSG00000001663.11	ENSMUST00000001713.10	1037	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.87228132326901	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCCGTGTTGTTTCTTT	9576	False	NA	NA	False	AATAAA	-24	NA	75634418	75619646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_75620068_75622628_75622806_75629910_75630062_75632876_75632965_75634218
ENSMUST00000001715.10	chr10	-	1880	5	FSM	ENSMUSG00000001665.12	ENSMUST00000001715.10	1880	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	2.34520787991171	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGCTTCTGGATCCT	NA	False	NA	5	True	AATAAA	-23	NA	75617248	75609948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_75610845_75611704_75611882_75612577_75612729_75613934_75614023_75616680
ENSMUST00000001716.8	chr10	-	649	3	FSM	ENSMUSG00000001666.9	ENSMUST00000001716.8	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_2	12	3885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGACTTCTTTGCTTC	NA	False	NA	-7	True	AATAAA	-18	NA	75609248	75607066	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_75607341_75608571_75608748_75609049
ENSMUST00000001724.12	chr1	+	2258	13	Antisense	novelGene_ENSMUSG00000001674.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCCTGGTGAGAGCTGG	NA	False	NA	NA	False	NA	NA	NA	121481563	121495718	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr1_+_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ENSMUST00000001801.11	chr19	-	2688	20	FSM	ENSMUSG00000001750.17	ENSMUST00000001801.11	2688	20	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	8.58007741992203	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTCCTCTCTG	NA	False	NA	0	True	AATAAA	-20	NA	3957133	3946049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
ENSMUST00000001806.10	chr11	+	2138	10	FSM	ENSMUSG00000001755.13	ENSMUST00000001806.10	2138	10	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	26.2908705931015	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3511	False	NA	25	True	ATTAAA	-16	NA	100973390	100977445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100973517_100973824_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ENSMUST00000001809.15	chr15	+	2817	15	Antisense	novelGene_ENSMUSG00000022283.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8456	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACCGCCTCCTGCACCC	NA	False	NA	NA	False	NA	NA	NA	36595904	36609217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr15_+_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ENSMUST00000001834.4	chr10	-	2009	12	FSM	ENSMUSG00000001783.4	ENSMUST00000001834.4	2009	12	0	0	0	0	multi-exon	FALSE	canonical	3	1317	junction_1	96.7988457003782	3487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTCTCTTCCTGTG	NA	False	NA	-12	True	ATTAAA	-17	NA	85793687	85774500	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
ENSMUST00000001836.11	chr10	+	2572	15	FSM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	18.5957258639765	1967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCACCTCACTTTGACT	NA	False	NA	8	True	AATAAA	-19	NA	85707694	85724960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
ENSMUST00000001845.13	chr7	-	1600	12	FSM	ENSMUSG00000001794.14	ENSMUST00000001845.13	1600	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	486.143841584714	2151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTAACTTGGTTATTTT	8309	False	NA	-8	True	NA	NA	NA	29898236	29886366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430_29894590_29898182
ENSMUST00000001900.9	chr5	-	1364	8	FSM	ENSMUSG00000001844.11	ENSMUST00000001900.9	1364	8	0	0	0	0	multi-exon	TRUE	canonical	3	167	junction_7	40.248209492435	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTTCTCATCATTG	5269	False	NA	-13	True	AATACA	-26	NA	143315011	143302243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
ENSMUST00000001950.12	chr7	-	3788	6	FSM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_2	12.1556571192182	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTGTTCTTGAGTAT	2697	False	NA	-5	True	AATAAA	-21	NA	141456224	141435319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141456012
ENSMUST00000002007.5	chr9	+	3339	9	FSM	ENSMUSG00000001942.9	ENSMUST00000002007.5	3339	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.683932183404	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGCGTTTCCAGTTTG	1820	False	NA	NA	False	AATATA	-14	NA	37532949	37559551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_37533161_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
ENSMUST00000002013.11	chr9	-	696	5	FSM	ENSMUSG00000001948.11	ENSMUST00000002013.11	696	5	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	1.92028643696715	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGGTTGTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	37525018	37514585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_37514783_37517088_37517167_37518912_37518984_37523131_37523315_37524851
ENSMUST00000002048.8	chr11	+	1383	5	FSM	ENSMUSG00000001983.8	ENSMUST00000002048.8	1383	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	5.93717104351896	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTTGAGGTGTCCTGA	874	False	NA	26	True	NA	NA	NA	105956886	105964438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_105957345_105960331_105960439_105962692_105962821_105963356_105963535_105963926
ENSMUST00000002064.15	chr2	+	1160	8	FSM	ENSMUSG00000001999.16	ENSMUST00000002064.15	1160	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	50.5988626152721	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAATAGTGTTGATGACT	2211	False	NA	NA	False	AATAAA	-20	NA	126912586	126939004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
ENSMUST00000002090.3	chrX	+	765	6	FSM	ENSMUSG00000002014.13	ENSMUST00000002090.3	765	6	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	441.755135793575	6906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	5466	False	NA	48	True	AATAAA	-30	NA	72830667	72834432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72830913_72832443_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ENSMUST00000002091.6	chrX	-	1219	8	FSM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	0	0	0	0	multi-exon	FALSE	canonical	3	2403	junction_7	231.225131040053	8071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTGTGTCTAACTGAG	NA	False	NA	-13	True	AATAAA	-17	NA	72759781	72729783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
ENSMUST00000002112.15	chr7	+	785	6	FSM	ENSMUSG00000002043.18	ENSMUST00000002112.15	785	6	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_1	62.2009646227452	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCAGTGCTTATCACA	507	False	NA	21	True	AGTAAA	-22	NA	19242636	19250070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_19242758_19248125_19248194_19248346_19248465_19248931_19249016_19249128_19249223_19249770
ENSMUST00000002128.14	chr11	+	1368	11	FSM	ENSMUSG00000002059.19	ENSMUST00000002128.14	1368	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	27.8790243731735	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTTTCTTTAAAG	6025	False	NA	21	True	ATTAAA	-15	NA	78079255	78083014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78079338_78080003_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
ENSMUST00000002133.9	chr11	+	1268	3	FSM	ENSMUSG00000002064.11	ENSMUST00000002133.9	1268	3	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	4	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTCATTTATTAAG	NA	False	NA	19	True	NA	NA	NA	78136571	78146322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78136997_78141841_78142039_78145676
ENSMUST00000002275.15	chr7	+	1969	15	FSM	ENSMUSG00000002205.17	ENSMUST00000002275.15	1969	15	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	19.1081775420785	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGAGAGTTCAGTGTTC	NA	False	NA	16	True	AATAAA	-16	NA	44397836	44426939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
ENSMUST00000002280.11	chr7	+	2242	14	FSM	ENSMUSG00000002210.12	ENSMUST00000002280.11	2242	14	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	14.7828462881374	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGTTTGTTCTTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	24099043	24122203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_24099317_24102816_24102973_24104951_24105027_24105112_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
ENSMUST00000002284.11	chr7	+	1506	7	FSM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	5.84284938098603	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGCTAGGTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	24161908	24175392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_24161993_24164555_24164667_24166099_24166244_24171323_24171480_24171997_24172133_24173634_24173782_24174663
ENSMUST00000002297.12	chr3	-	3498	20	FSM	ENSMUSG00000002227.16	ENSMUST00000002297.12	3498	20	0	0	0	0	multi-exon	TRUE	canonical	2	35	junction_17	294.113899959836	2218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725558	104702151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711702_104711786_104712030_104712219_104712424_104725251
ENSMUST00000002298.7	chr3	+	1721	10	FSM	ENSMUSG00000002228.8	ENSMUST00000002298.7	1721	10	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_1	13.4200881305638	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGTCATTATTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	104688371	104693334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713_104692866_104693017
ENSMUST00000002303.12	chr3	+	1202	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	22.8965062837106	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696203	104701775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
ENSMUST00000002368.16	chr5	-	2401	12	FSM	ENSMUSG00000002297.17	ENSMUST00000002368.16	2401	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	130.994164276048	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATAATTTCAAGTGAG	NA	False	NA	NA	False	AATAAA	-25	NA	8472680	8446972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454914_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ENSMUST00000002391.15	chr14	-	2382	5	FSM	ENSMUSG00000002320.16	ENSMUST00000002391.15	2382	5	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	41.5060236592232	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATATTTGAACTTTTTA	5206	False	NA	-44	True	ATTAAA	-22	NA	55880797	55873516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050
ENSMUST00000002395.8	chr14	+	2184	20	FSM	ENSMUSG00000002324.9	ENSMUST00000002395.8	2184	20	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	6.49738920505725	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTCTTTTTTTTTTT	1328	False	NA	9	True	ATTAAA	-21	NA	55855493	55862852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55855811_55856002_55856116_55856198_55856268_55856354_55856498_55856577_55856654_55857036_55857158_55858691_55858777_55859671_55859752_55859883_55860020_55860101_55860175_55860250_55860343_55860620_55860671_55860953_55861092_55861377_55861445_55861532_55861700_55861805_55861855_55862179_55862244_55862341_55862459_55862529_55862637_55862732
ENSMUST00000002400.7	chr14	-	1733	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_4	50.5750926840476	1982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTAAGCTGTATCTG	2285	False	NA	-8	True	AATAAA	-29	NA	55897965	55895335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
ENSMUST00000002403.10	chr14	-	1477	9	FSM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_7	15.4833580014156	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTTCTCATTCTGT	NA	False	NA	0	True	AATAAA	-20	NA	55983147	55976476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910_55980991_55981114_55981259_55982374_55982546_55982897
ENSMUST00000002413.15	chr8	+	3018	12	FSM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	38.6768771547844	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGATCCTTATCTTTT	5866	False	NA	NA	False	AATAAA	-44	NA	70625054	70636331	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUST00000002444.15	chr17	-	3350	18	FSM	ENSMUSG00000024206.16	ENSMUST00000002444.15	3350	18	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_12	62.8192882463543	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTGGTGTCCGTGTTTG	NA	False	NA	-4	True	NA	NA	NA	57138008	57082899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ENSMUST00000002445.10	chr17	+	2373	16	FSM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_2	28.8962896503263	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980357	57018764	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ENSMUST00000002452.8	chr17	+	545	4	FSM	ENSMUSG00000002379.8	ENSMUST00000002452.8	545	4	0	0	0	0	multi-exon	FALSE	canonical	3	2627	junction_1	54.2975342186201	15283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATGTCTTAAAGGCAGG	NA	False	NA	18	True	AATAAA	-18	NA	57024766	57029137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_57024943_57028034_57028128_57028318_57028442_57028984
ENSMUST00000002473.10	chr8	+	1433	9	FSM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_4	29.4573314303927	584	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGTATGGCTTCAGGC	NA	False	NA	89	True	ACTAAA	-7	NA	71849504	71857263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
ENSMUST00000002490.7	chr6	+	491	4	FSM	ENSMUSG00000002416.14	ENSMUST00000002490.7	491	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1056.98470502967	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTCATTAAAGGTGTAAAT	NA	False	NA	-19	True	AAGAAA	-7	NA	39569518	39576356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_39569738_39573384_39573530_39575199_39575296_39576325
ENSMUST00000002502.12	chr3	+	4955	25	FSM	ENSMUSG00000002428.13	ENSMUST00000002502.12	4955	25	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_12	28.4765680965168	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6938	False	NA	16	True	AATAAA	-20	NA	20111974	20172654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ENSMUST00000002518.9	chr10	+	1411	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	0	0	0	0	multi-exon	FALSE	canonical	3	2772	junction_6	274.064925397858	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTGTCCCTGCTTCT	57	False	NA	14	True	AATAAA	-16	NA	81395327	81402196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ENSMUST00000002529.7	chr2	+	3054	21	FSM	ENSMUSG00000002455.15	ENSMUST00000002529.7	3054	21	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_3	47.7921280128851	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGGGCTTGGGCCTCA	2494	False	NA	28	True	ATTAAA	-16	NA	181243111	181297453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263579_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278685_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818_181290939_181291214_181291392_181291889_181292024_181292878_181292971_181294226_181294342_181296628_181296756_181297214
ENSMUST00000002532.9	chr2	-	1511	6	FSM	ENSMUSG00000002458.14	ENSMUST00000002532.9	1511	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	20.8461027532726	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTGTTCTTTCAAGTT	NA	False	NA	-15	True	AATAAA	-14	NA	181335770	181330214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
ENSMUST00000002551.5	chr18	+	858	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	14352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCGGTGCATGTCTTTA	-32	True	NA	8	True	AATAAA	-15	NA	10617774	10628230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
ENSMUST00000002599.11	chr15	-	1821	11	FSM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	1143	junction_7	140.604729650179	2835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952761	75942038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ENSMUST00000002625.15	chr2	-	2005	7	FSM	ENSMUSG00000002550.17	ENSMUST00000002625.15	2005	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	20.9741904889478	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTCCTGTTTTATTT	NA	False	NA	NA	False	AATAAA	-17	NA	32150171	32145013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
ENSMUST00000002655.8	chr11	-	747	4	FSM	ENSMUSG00000002580.8	ENSMUST00000002655.8	747	4	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_2	62.9567752950829	2431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTGTGTTTATGTCCA	NA	False	NA	1	True	AATAAA	-26	NA	98329817	98328533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_98328972_98329062_98329140_98329472_98329571_98329683
ENSMUST00000002683.3	chr7	-	3032	5	FSM	ENSMUSG00000002608.9	ENSMUST00000002683.3	3032	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	5.52268050859363	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTCATCTGTTATGTAA	NA	False	NA	-3	True	ATTAAA	-24	NA	25418513	25410530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25418342
ENSMUST00000002699.7	chr17	-	3731	14	FSM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	0	0	0	0	multi-exon	TRUE	canonical	3	426	junction_6	74.0811964579343	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGTTCATTAATTAC	NA	False	NA	-1	True	AATAAA	-16	NA	32540159	32522645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ENSMUST00000002710.10	chr7	-	1295	7	FSM	ENSMUSG00000002635.12	ENSMUST00000002710.10	1295	7	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_2	61.3994209165599	3133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTGGTTTATTGTTCA	5732	False	NA	-6	True	TATAAA	-15	NA	33896086	33883923	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ENSMUST00000002733.7	chr17	-	1717	13	FSM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_7	59.552672763977	2837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGTGCGAGTCATCA	NA	False	NA	-6	True	AATAAA	-13	NA	57318288	57310404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
ENSMUST00000002735.9	chr17	+	983	6	FSM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	0	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_4	119.017645750536	6060	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAAGCACCTTCCATT	NA	False	NA	33	True	ATTAAA	-21	NA	57297304	57303188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_57297514_57297605_57297678_57298293_57298391_57299825_57300014_57300447_57300554_57302877
ENSMUST00000002737.7	chr17	+	917	4	FSM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_1	15.369522511198	2012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAACAAAAAACC	371	False	NA	NA	False	NA	NA	NA	57304342	57306322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_57304568_57305388_57305563_57305670_57305796_57305929
ENSMUST00000002756.14	chr12	-	1003	8	FSM	ENSMUSG00000002679.15	ENSMUST00000002756.14	1003	8	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_7	64.9976451692753	2245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATCATGCCTTTCCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	81641732	81620338	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
ENSMUST00000002790.14	chr2	-	3641	25	Antisense	novelGene_ENSMUSG00000090397.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2069	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCGGCCACTGCGCATG	NA	False	NA	NA	False	NA	NA	NA	166788309	166747978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr2_-_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ENSMUST00000002805.14	chr2	+	1172	6	FSM	ENSMUSG00000002728.15	ENSMUST00000002805.14	1172	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	436.248094551713	2365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTAATCATCCCTGTC	NA	False	NA	31	True	TATAAA	-16	NA	145745160	145758345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_145745283_145750510_145750536_145753592_145753714_145754312_145754449_145757453_145757600_145757723
ENSMUST00000002818.9	chr11	+	2541	7	FSM	ENSMUSG00000002741.10	ENSMUST00000002818.9	2541	7	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_4	17.3205080756888	448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGTGTTTACTTT	NA	False	NA	19	True	GATAAA	-20	NA	5905692	5917780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_5906005_5909296_5909380_5911187_5911289_5912336_5912442_5912692_5912759_5914560_5914663_5916008
ENSMUST00000002837.11	chr5	-	3800	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	14.1656862405839	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATTGTTACCTACTCC	NA	False	NA	0	True	AATAAA	-31	NA	108280486	108269492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
ENSMUST00000002839.9	chr17	-	2926	15	FSM	ENSMUSG00000059409.10	ENSMUST00000002839.9	2926	15	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_9	37.0099958918988	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1109	False	NA	NA	False	AATAAA	-15	NA	47015928	46993916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ENSMUST00000002844.14	chr17	+	1031	7	FSM	ENSMUSG00000002767.14	ENSMUST00000002844.14	1031	7	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_4	70.4430423975443	4884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	False	NA	28	True	AATAAA	-17	NA	46957154	46961058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960035_46960809
ENSMUST00000002845.8	chr17	+	859	4	FSM	ENSMUSG00000002768.9	ENSMUST00000002845.8	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	390.850639275699	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCTGTGCTCCTGAATCC	NA	False	NA	5	True	AATAAA	-30	NA	46992049	46994037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46992132_46992542_46992824_46992934_46993038_46993644
ENSMUST00000002846.9	chr17	-	1035	6	FSM	ENSMUSG00000002769.10	ENSMUST00000002846.9	1035	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	8.1338797630651	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCCTGGTGTTTCTT	2979	False	NA	NA	False	AGTAAA	-23	NA	47040094	47036589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47036898_47036986_47037109_47037194_47037338_47037531_47037643_47038190_47038319_47039871
ENSMUST00000002855.14	chr7	+	1599	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	0	0	0	0	multi-exon	TRUE	canonical	3	208	junction_1	16.5378354085412	1911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTCCCTGCCCGCT	3944	False	NA	17	True	AATAAA	-21	NA	45522195	45533156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
ENSMUST00000002881.5	chr12	-	734	5	FSM	ENSMUSG00000002804.5	ENSMUST00000002881.5	734	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	82.3995600716412	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAAAGCTTGTGTAAGT	8854	False	NA	-32	True	GGGGCT	-44	NA	112905737	112898374	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_112898671_112901975_112902178_112902414_112902480_112902898_112902943_112905610
ENSMUST00000002883.7	chr13	+	1764	6	FSM	ENSMUSG00000021319.8	ENSMUST00000002883.7	1764	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	1.72046505340853	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGTGTTTGTTGTCTGC	NA	False	NA	NA	False	GATAAA	-28	NA	19807344	19816999	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_19808048_19809197_19809279_19809363_19809430_19811275_19811475_19814235_19814300_19816348
ENSMUST00000002885.8	chr13	-	2363	3	FSM	ENSMUSG00000002808.8	ENSMUST00000002885.8	2363	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	5.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAGCCTATTAAGTCTC	NA	False	NA	NA	False	AATAAA	-34	NA	19803974	19775875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_19777519_19778616_19778826_19803463
ENSMUST00000002889.5	chr11	-	4060	30	FSM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	0	0	0	0	multi-exon	TRUE	canonical	3	227	junction_19	35.2603363548522	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	60618089	60604968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ENSMUST00000002891.11	chr11	-	3741	19	FSM	ENSMUSG00000002814.16	ENSMUST00000002891.11	3741	19	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_8	18.9965071513323	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGGTGGCATTCAGTC	NA	False	NA	1	True	AATAAA	-16	NA	60668191	60630883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ENSMUST00000002902.8	chr9	+	1316	10	FSM	ENSMUSG00000002825.9	ENSMUST00000002902.8	1316	10	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_5	65.5845510263914	2624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGCTCTTGTGTCTGTC	2369	False	NA	42	True	TATAAA	-28	NA	21323132	21331570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
ENSMUST00000002911.10	chr17	+	2264	16	FSM	ENSMUSG00000002833.12	ENSMUST00000002911.10	2264	16	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	225.638196136105	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386637	56407596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403850_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
ENSMUST00000002923.10	chr16	-	2966	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	0	0	0	0	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	6212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGCTGGAGACCTTT	NA	False	NA	NA	False	NA	NA	NA	38273065	38264391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
ENSMUST00000002924.15	chr16	+	2871	9	FSM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	0	0	0	0	multi-exon	FALSE	canonical	1	126	junction_1	222.417084269622	2920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCTATTTGTGAGCAT	NA	False	NA	4	True	AATAAA	-15	NA	38383173	38412524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUST00000002925.6	chr16	-	1573	7	FSM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_6	22.2666916167525	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTGTCTGGATCGCCT	NA	False	NA	-16	True	AGTAAA	-22	NA	38343025	38318708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
ENSMUST00000002979.16	chr12	+	5784	33	FSM	ENSMUSG00000002900.18	ENSMUST00000002979.16	5784	33	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_13	20.6626313894794	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTTTCTTTTATTGT	NA	False	NA	NA	False	AATAAA	-23	NA	31315291	31379643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ENSMUST00000003029.14	chr8	-	1790	13	FSM	ENSMUSG00000002949.16	ENSMUST00000003029.14	1790	13	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_5	35.4920765805553	2111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	False	NA	-13	True	AATAAA	-22	NA	4325913	4309730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ENSMUST00000003035.12	chr1	-	4984	10	FSM	ENSMUSG00000030768.13	ENSMUST00000003035.12	4984	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	20.4420288428002	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGTCTCCGTCGTTCT	NA	False	NA	2	True	AATAAA	-34	NA	183003049	182867829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_182984515_182984604_183002886
ENSMUST00000003044.14	chr7	+	2184	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGACTTAGCAGCTGTGT	9335	False	NA	90	True	NA	NA	NA	44506582	44512416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUST00000003061.14	chr7	-	2429	15	FSM	ENSMUSG00000002980.15	ENSMUST00000003061.14	2429	15	0	0	0	0	multi-exon	TRUE	canonical	3	510	junction_11	49.5145824737624	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCGCCAGGTTCTCTTCT	3912	False	NA	-5	True	AATAAA	-26	NA	19504472	19490055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ENSMUST00000003066.16	chr7	-	1128	4	FSM	ENSMUSG00000002985.17	ENSMUST00000003066.16	1128	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4936.24555935199	5328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGAGTCTCTGTGAGT	NA	False	NA	-30	True	AATAAA	-14	NA	19432977	19430196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_19431029_19431403_19431573_19432112_19432198_19432935
ENSMUST00000003071.10	chr7	-	538	3	FSM	ENSMUSG00000074336.6	ENSMUST00000003071.10	538	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	3.5	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGCATAGCTTCTCTTGA	5934	False	NA	3	True	AATAAA	-27	NA	19415404	19412007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_19412238_19412534_19412668_19415229
ENSMUST00000003115.9	chr6	+	2393	3	FSM	ENSMUSG00000003031.15	ENSMUST00000003115.9	2393	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1.5	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAGTGCAACTGTCC	NA	False	NA	13	True	AATAAA	-18	NA	134897363	134902476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_134898358_134898918_134899047_134901205
ENSMUST00000003135.14	chr1	-	2095	9	FSM	ENSMUSG00000003051.14	ENSMUST00000003135.14	2095	9	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_7	111.074791807142	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGAGCTCTCTGTGTAC	NA	False	NA	-6	True	AATAAA	-27	NA	135186306	135181312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135186086
ENSMUST00000003156.15	chr10	+	931	4	FSM	ENSMUSG00000003072.16	ENSMUST00000003156.15	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	2420	junction_3	40.5983031938802	21844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTTTCTAACTGCAC	4445	False	NA	20	True	ATTAAA	-19	NA	79978148	79981652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79978441_79979665_79979820_79981052_79981142_79981256
ENSMUST00000003183.12	chr7	-	2072	13	FSM	ENSMUSG00000003099.12	ENSMUST00000003183.12	2072	13	0	0	0	0	multi-exon	FALSE	canonical	3	1050	junction_5	57.0079794609686	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCTCGACGTGTGTCCA	NA	False	NA	-3	True	AATAAA	-37	NA	16761841	16738564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
ENSMUST00000003268.11	chr17	-	2073	10	FSM	ENSMUSG00000003200.11	ENSMUST00000003268.11	2073	10	0	0	0	0	multi-exon	FALSE	canonical	3	585	junction_1	54.5914116159513	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343635	56323749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ENSMUST00000003290.12	chr7	-	1075	7	FSM	ENSMUSG00000003190.13	ENSMUST00000003290.12	1075	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	18.8473399243029	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	44647003	44640645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44640879_44642167_44642456_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ENSMUST00000003319.6	chr16	+	3090	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	0	0	0	0	multi-exon	TRUE	canonical	3	293	junction_13	17.6705970470723	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACACGTGCAAGAGCATG	NA	False	NA	10	True	AATAAA	-19	NA	20367326	20380129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ENSMUST00000003320.14	chr16	+	2554	16	FSM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	0	0	0	0	multi-exon	FALSE	canonical	3	2657	junction_7	154.998007155648	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317566	20328073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ENSMUST00000003370.14	chr2	+	2092	13	FSM	ENSMUSG00000003283.16	ENSMUST00000109799.8	2092	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_9	8.17346655682615	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCAGCTTCTCTGTCTCC	NA	False	NA	19	True	AATAAA	-29	NA	152950387	152993361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_152950675_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152973245_152975988_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
ENSMUST00000003386.7	chr9	+	1288	9	FSM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_5	79.3851371479574	4573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGGTCACTGCTGTGG	NA	False	NA	26	True	AATAAA	-26	NA	20914033	20920135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919037_20919118_20919196_20919789
ENSMUST00000003416.15	chr17	+	2227	13	FSM	ENSMUSG00000048440.17	ENSMUST00000003416.15	2227	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_12	10.7625895273086	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGTCTTGGTTCCAT	NA	False	NA	20	True	NA	NA	NA	32755542	32770771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ENSMUST00000003438.11	chr10	-	2682	4	FSM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	9.97775303139718	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGGCTGCTCCTTGTTG	9117	False	NA	-1	True	AATAAA	-16	NA	80537689	80521086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80523008_80525685_80525889_80526902_80527402_80537630
ENSMUST00000003445.8	chr15	-	734	6	FSM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_4	33.5177564881661	3258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTGTATTTTTCACT	NA	False	NA	NA	False	AATAAA	-15	NA	98626079	98622250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091_98625180_98625563_98625630_98625837
ENSMUST00000003450.15	chr15	-	3187	17	FSM	ENSMUSG00000003360.16	ENSMUST00000003450.15	3187	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	5.44252641243017	803	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCAGCCCCGAGCTCC	6999	False	NA	-14	True	AATAAA	-15	NA	98560770	98543014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98549480_98549798_98549938_98550353_98550420_98550768_98550863_98554482_98554594_98556110_98556317_98560703
ENSMUST00000003461.15	chr11	+	4127	23	FSM	ENSMUSG00000020456.18	ENSMUST00000003461.15	4127	23	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_8	60.360778272973	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241632	6306642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUST00000003493.9	chr9	+	2012	18	FSM	ENSMUSG00000003402.15	ENSMUST00000003493.9	2012	18	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_11	125.012497645132	1892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	20	True	AATAAA	-16	NA	21914313	21925518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ENSMUST00000003502.4	chr4	+	1053	4	FSM	ENSMUSG00000003411.11	ENSMUST00000003502.4	1053	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	6.34209919681348	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGCTTGTTTCCTATC	NA	False	NA	7	True	ATTAAA	-18	NA	108747486	108798385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_108747733_108781102_108781222_108786598_108786724_108797822
ENSMUST00000003512.9	chr7	-	1770	7	FSM	ENSMUSG00000003420.9	ENSMUST00000003512.9	1770	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	11.6583303550151	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACACCTCTTGATTGCTA	765	False	NA	67	True	AATAAA	-26	NA	44753275	44742413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751837_44752096_44752426_44752698_44753063
ENSMUST00000003513.11	chr7	+	1814	9	FSM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	63.7582102556212	1625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTTGTTGTTTTATT	3085	False	NA	25	True	NA	NA	NA	44711879	44727634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ENSMUST00000003521.10	chr7	-	661	5	FSM	ENSMUSG00000003429.12	ENSMUST00000003521.10	661	5	0	0	0	0	multi-exon	FALSE	canonical	3	18027	junction_3	5229.01092463957	128344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGGAGTCTCATGTGTC	NA	False	NA	-1	True	AATAAA	-24	NA	44773863	44771802	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772975_44773720
ENSMUST00000003527.10	chr7	-	3513	30	FSM	ENSMUSG00000003435.10	ENSMUST00000003527.10	3513	30	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_29	71.450522531579	1958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038144	28014318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28029455_28030004_28030071_28030794_28030955_28037776_28037861_28038119
ENSMUST00000003550.11	chr1	-	2901	17	FSM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_8	31.8580224394108	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGTTTGGTATTCTTC	8996	False	NA	50	True	ATTAAA	-21	NA	171910362	171893579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ENSMUST00000003572.10	chr6	+	2380	17	FSM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	747.261037786495	1923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATCTGTTGTGTTTCCAT	NA	False	NA	35	True	ATTAAA	-29	NA	55014991	55056485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045154_55046325_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ENSMUST00000003575.11	chr8	+	2158	8	FSM	ENSMUSG00000031799.11	ENSMUST00000003575.11	2158	8	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_1	35.3714978074559	1302	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGATTTATTCTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	72889072	72906986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUST00000003612.13	chr11	-	4212	3	FSM	ENSMUSG00000003518.14	ENSMUST00000003612.13	4212	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTCTGTTTTGTGTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	101875625	101861968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_101865766_101872442_101872670_101875437
ENSMUST00000003620.13	chr16	-	2386	14	FSM	ENSMUSG00000003526.13	ENSMUST00000003620.13	2386	14	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	13.1900087703135	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTCTCTTGGTACCT	7943	False	NA	0	True	AATAAA	-20	NA	17907156	17889588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906751
ENSMUST00000003621.10	chr16	-	2821	10	FSM	ENSMUSG00000003527.10	ENSMUST00000003621.10	2821	10	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_7	18.4397584408805	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTTTCTATCAATTGT	NA	False	NA	0	True	NA	NA	NA	17729212	17718572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725787_17727768_17727865_17727951_17728121_17729025
ENSMUST00000003622.16	chr16	-	1666	9	FSM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	0	0	0	0	multi-exon	FALSE	canonical	3	1593	junction_8	124.030175259894	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	-21	True	AATAAA	-16	NA	17746083	17743086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
ENSMUST00000003635.7	chr17	+	1131	2	FSM	ENSMUSG00000003541.7	ENSMUST00000003635.7	1131	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCGAAGTGTATCATTC	NA	False	NA	16	True	AATAAA	-29	NA	36132575	36133815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_36132821_36132929
ENSMUST00000003642.7	chr17	-	2322	16	FSM	ENSMUSG00000003546.11	ENSMUST00000003642.7	2322	16	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_15	25.3531501439608	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTGTGTTCGGAGTC	NA	False	NA	-9	True	AATAAA	-11	NA	46956070	46941556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006
ENSMUST00000003655.9	chr19	+	1736	11	FSM	ENSMUSG00000003559.9	ENSMUST00000003655.9	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_6	16.3612346722367	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGATGTCTGTAGTTT	5974	False	NA	30	True	AATAAA	-40	NA	46695896	46729534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
ENSMUST00000003754.8	chr8	-	1431	11	FSM	ENSMUSG00000003657.10	ENSMUST00000003754.8	1431	11	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_9	44.1960405466372	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCACCCGTTTCTTGTCG	7616	False	NA	-12	True	AATAAA	-22	NA	110894838	110869169	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110881284_110881375_110883551_110883629_110894675
ENSMUST00000003759.11	chr2	-	3075	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTTTTAGTTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	127089736	127082857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
ENSMUST00000003818.14	chr1	-	2697	6	FSM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_4	17.805617091244	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTCCTTTTTATTC	NA	False	NA	-1	True	ATTAAA	-17	NA	121255753	121232081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247702_121255419
ENSMUST00000003857.7	chr7	-	2358	18	FSM	ENSMUSG00000089832.9	ENSMUST00000003857.7	2358	18	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_5	29.8825845289775	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTATAGTCTTGGTTTG	NA	False	NA	-28	True	AATAAA	-17	NA	27055444	27041557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
ENSMUST00000003860.13	chr7	+	2181	15	FSM	ENSMUSG00000003762.14	ENSMUST00000003860.13	2181	15	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_1	14.7544528041883	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTTCTCTCTGTGCTA	NA	False	NA	22	True	AATAAA	-22	NA	26932447	26957375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_26932599_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ENSMUST00000003876.10	chr18	-	4468	22	FSM	ENSMUSG00000003778.15	ENSMUST00000003876.10	4468	22	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_21	99.9950565671548	94690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAACTAGTATGACCC	NA	False	NA	NA	False	AATAAA	-17	NA	34757654	34731667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ENSMUST00000003906.13	chr8	+	1826	13	FSM	ENSMUSG00000003808.19	ENSMUST00000003906.13	1826	13	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_9	56.0676055212713	1584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTGTCATTCATTTCA	NA	False	NA	38	True	AATAAA	-38	NA	85583617	85595886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ENSMUST00000003907.14	chr8	-	2167	11	FSM	ENSMUSG00000003809.15	ENSMUST00000003907.14	2167	11	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	21.1293634546808	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATACTTTGGCTTCTCAA	NA	False	NA	-5	True	AATAAA	-9	NA	85620546	85613021	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183
ENSMUST00000003910.13	chr8	+	1715	6	FSM	ENSMUSG00000003812.14	ENSMUST00000003910.13	1715	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	11.7711511756497	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGACTTGAATTTGTTT	NA	False	NA	18	True	NA	NA	NA	85635188	85638098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314
ENSMUST00000003911.13	chr8	-	2074	9	FSM	ENSMUSG00000003813.16	ENSMUST00000003911.13	2074	9	0	0	0	0	multi-exon	TRUE	canonical	3	805	junction_3	189.238440862315	2371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCATCTGCTCCTTCA	NA	False	NA	NA	False	NA	NA	NA	85567270	85561280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ENSMUST00000003922.6	chr8	+	685	4	FSM	ENSMUSG00000003824.13	ENSMUST00000003922.6	685	4	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_2	470.355184940062	1868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTCCTTTGCTCTTTCCC	NA	False	NA	91	True	AAAACA	-4	NA	85598821	85614085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85598883_85599348_85599462_85612563_85612753_85613763
ENSMUST00000003946.9	chr8	-	1658	9	FSM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_2	34.7902195307819	2207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTGTTTTATTT	NA	False	NA	-3	True	AATAAA	-14	NA	108151681	108139120	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
ENSMUST00000003947.9	chr8	-	1553	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_5	9.8264947972306	435	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTGGCGCATGCCTTT	NA	False	NA	-2	True	AATAAA	-18	NA	108129838	108114856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
ENSMUST00000003964.17	chr7	+	3678	16	FSM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_1	61.1041369757855	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTGGACATAAGCTC	1027	False	NA	25	True	AATACA	-21	NA	45084267	45106043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ENSMUST00000003971.10	chr7	-	735	6	FSM	ENSMUSG00000003872.10	ENSMUST00000003971.10	735	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	1.93907194296653	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTGTCTTGTGTGTCTG	7942	False	NA	1	True	TTTAAA	-16	NA	45020007	45017314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45017423_45017727_45017892_45018564_45018775_45019338_45019411_45019550_45019670_45019945
ENSMUST00000004072.10	chr15	+	851	6	FSM	ENSMUSG00000003970.10	ENSMUST00000004072.10	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	5295	junction_1	2369.37927736359	140459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788277	76790514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ENSMUST00000004136.10	chr3	-	1311	8	FSM	ENSMUSG00000004038.10	ENSMUST00000004136.10	1311	8	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_5	50.6947648547014	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTCTTTTTCTTTTGC	NA	False	NA	0	True	AATAAA	-20	NA	107876599	107871011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875081_107875164_107875451_107875517_107876078_107876155_107876420
ENSMUST00000004140.11	chr3	-	1289	8	FSM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_3	56.1666616201374	2673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTGTCTTTTTCT	6583	False	NA	-4	True	AATAAA	-18	NA	107925289	107919570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
ENSMUST00000004172.15	chr16	+	1730	6	FSM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_2	14.4277510374971	2081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACCTGTGATTTTTCCT	NA	False	NA	9	True	CATAAA	-17	NA	4544226	4584606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
ENSMUST00000004200.9	chr9	+	1111	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	6230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATACAGCTTATAAAAAG	NA	False	NA	3	True	AATAAA	-27	NA	14411912	14421873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ENSMUST00000004202.17	chr9	-	5367	39	FSM	ENSMUSG00000004099.17	ENSMUST00000004202.17	5367	39	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_35	116.269340570878	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864275	20818504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ENSMUST00000004203.6	chr9	+	1670	11	FSM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_9	65.2172523186925	1785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799470	20803474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
ENSMUST00000004206.10	chr9	-	1101	11	FSM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	0	0	0	0	multi-exon	FALSE	canonical	3	2112	junction_10	212.212370044727	6148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5139	False	NA	-1	True	AGTAAA	-16	NA	20809919	20805644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
ENSMUST00000004232.10	chr3	+	1492	9	FSM	ENSMUSG00000074207.11	ENSMUST00000004232.10	1492	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	3.01817411691241	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTTCTGTGAAACCT	NA	False	NA	NA	False	AATAAA	-28	NA	137983254	137996459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_137983498_137985491_137985594_137986134_137986274_137988196_137988285_137988375_137988596_137992452_137992714_137994509_137994646_137995562_137995702_137996295
ENSMUST00000004316.15	chr10	+	2654	14	FSM	ENSMUSG00000004207.15	ENSMUST00000004316.15	2654	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	282.946207278023	1506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGGCCTTGTGTCTCT	6990	False	NA	NA	False	AATAAA	-16	NA	60113449	60138376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134870_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUST00000004327.11	chrX	-	2652	13	FSM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_8	19.8990507869653	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTTGTTCTTTTC	NA	False	NA	-6	True	ATTAAA	-18	NA	73472800	73453088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
ENSMUST00000004375.16	chr6	+	1318	10	FSM	ENSMUSG00000004264.18	ENSMUST00000004375.16	1318	10	0	0	0	0	multi-exon	FALSE	canonical	1	924	junction_9	595.782978965236	4760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTGAGTGTGTAC	NA	False	NA	24	True	AATAAA	-25	NA	124689298	124693913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692994_124693387_124693394_124693568
ENSMUST00000004378.15	chr6	-	2795	12	FSM	ENSMUSG00000004267.17	ENSMUST00000004378.15	2795	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_11	8.77449346328266	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGGCTGAACTAAGGAT	9866	False	NA	-3	True	NA	NA	NA	124746636	124737017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
ENSMUST00000004379.8	chr6	-	1034	6	FSM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	0	0	0	0	multi-exon	FALSE	canonical	3	1245	junction_5	105.298433036774	8420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTCAGACCTGATT	NA	False	NA	-14	True	TATAAA	-19	NA	124689141	124681343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
ENSMUST00000004381.14	chr6	+	2281	13	FSM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	0	0	0	0	multi-exon	TRUE	canonical	3	738	junction_2	58.4776785524946	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATACAGTGTTGTCTC	NA	False	NA	NA	False	AATAAA	-25	NA	124639989	124681381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ENSMUST00000004396.13	chr6	+	703	2	FSM	ENSMUSG00000004285.13	ENSMUST00000004396.13	703	2	0	0	0	0	multi-exon	FALSE	canonical	3	1924	junction_1	0	9414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTGGTATGGATACG	NA	False	NA	37	True	ATTAAA	-19	NA	29467716	29470511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_29467974_29470065
ENSMUST00000004453.9	chr13	+	1340	5	FSM	ENSMUSG00000004341.9	ENSMUST00000004453.9	1340	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	5.71729831301464	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGACTCTGAGTGATGT	925	False	NA	NA	False	NA	NA	NA	21496294	21503794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_21496515_21497817_21497972_21501154_21501273_21501738_21501839_21503046
ENSMUST00000004473.15	chr10	-	1763	6	FSM	ENSMUSG00000004359.17	ENSMUST00000004473.15	1763	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	182.911563330479	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	88518885	88510633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88518836
ENSMUST00000004507.11	chr11	-	1956	14	FSM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	0	0	0	0	multi-exon	FALSE	canonical	3	937	junction_7	74.9654752883426	2595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTGTCTGGCTCTG	4489	False	NA	-2	True	NA	NA	NA	6217772	6208918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ENSMUST00000004508.13	chr11	-	2003	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_4	49.7663289785373	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTCTCCCTTTGTTTT	5338	False	NA	NA	False	ATTAAA	-24	NA	6224870	6220368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ENSMUST00000004554.14	chr7	+	761	6	FSM	ENSMUSG00000012848.16	ENSMUST00000004554.14	761	6	0	0	0	0	multi-exon	FALSE	canonical	3	14799	junction_5	1601.25238485381	115312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656216	12660613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ENSMUST00000004565.15	chr1	-	2289	5	FSM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_4	66.8169140263152	1509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGCCCTTTTTCCTGCAT	NA	False	NA	-4	True	AATAAA	-21	NA	119432524	119398034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
ENSMUST00000004574.14	chr16	+	1927	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	0	0	0	0	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGTATCTGTCCAAG	NA	False	NA	30	True	AATAAA	-34	NA	22676594	22691138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ENSMUST00000004576.8	chr16	-	2803	8	FSM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	24.7526539496479	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGCCAGAGTTGGTT	NA	False	NA	NA	False	AATAAA	-21	NA	22676419	22631963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
ENSMUST00000004614.15	chr7	+	3591	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	17.0617127163813	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGACTATAGCGTGT	NA	False	NA	27	True	NA	NA	NA	12568687	12584504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ENSMUST00000004646.13	chr5	-	3491	11	FSM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_1	46.3810306051946	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	114046819	113980496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ENSMUST00000004729.5	chr7	+	893	6	FSM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_1	117.194539121923	8454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGATGTCCTTGTTT	1908	False	NA	52	True	AATAAA	-35	NA	43093506	43107224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43105902_43106062_43106993
ENSMUST00000004745.9	chr8	+	1847	19	FSM	ENSMUSG00000004626.15	ENSMUST00000004745.9	1847	19	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_17	74.555886735479	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4602	False	NA	16	True	AATAAA	-22	NA	3681169	3692795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691894_3692056_3692645
ENSMUST00000004756.14	chr8	+	2244	9	FSM	ENSMUSG00000004637.16	ENSMUST00000004756.14	2244	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	27.9013328534678	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTGTCTGAAGTGTAT	NA	False	NA	12	True	AATAAA	-15	NA	115166394	116079447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115406526_115406616_115432940_115433127_115438726_115438992_116078376
ENSMUST00000004786.10	chr10	-	1148	7	FSM	ENSMUSG00000004667.19	ENSMUST00000004786.10	1148	7	0	0	0	0	multi-exon	FALSE	canonical	3	2552	junction_2	153.800375667797	14756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5515	False	NA	-19	True	ATTAAA	-19	NA	79875629	79871782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
ENSMUST00000004868.6	chr11	-	1411	4	FSM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	5.18544972870135	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTTCATTTCCTCTT	NA	False	NA	1	True	AATAAA	-17	NA	4045445	4041479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_4042300_4043800_4044034_4044388_4044517_4045215
ENSMUST00000004910.12	chr12	+	1605	8	FSM	ENSMUSG00000004788.12	ENSMUST00000004910.12	1605	8	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_7	13.1661284657074	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGAAAGGGCCCCAAAC	NA	False	NA	NA	False	AATAAA	-21	NA	85266254	85273402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
ENSMUST00000004955.14	chr11	-	1837	12	FSM	ENSMUSG00000020528.15	ENSMUST00000004955.14	1837	12	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_11	44.7137821487915	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTATGTGGATAGTTG	242	False	NA	-7	True	AATAAA	-22	NA	61652888	61620479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652779
ENSMUST00000004965.8	chr16	-	1872	6	FSM	ENSMUSG00000004843.8	ENSMUST00000004965.8	1872	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_5	16.0573970493352	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCCTAACGCGCATCA	NA	False	NA	-8	True	AATAAA	-19	NA	65359612	65336013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65347848_65347941_65359360
ENSMUST00000005003.12	chr1	-	3510	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	0	0	0	0	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	2900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGTTAGAGCCTCA	NA	False	NA	-50	True	AATAAA	-33	NA	181669944	181642899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ENSMUST00000005015.10	chr3	-	2099	7	FSM	ENSMUSG00000004895.10	ENSMUST00000005015.10	2099	7	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_5	35.6401770789964	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGTGTCTGGATCTCAGA	2299	False	NA	1	True	AATAAA	-27	NA	87792915	87766209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_87766654_87767452_87767519_87769437_87769582_87774621_87774718_87776889_87777457_87779516_87779565_87792181
ENSMUST00000005019.6	chr3	+	931	4	FSM	ENSMUSG00000004885.6	ENSMUST00000005019.6	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	3.29983164553722	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGGCTCCCTGAG	8831	False	NA	8	True	ATTAAA	-19	NA	87855972	87860683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_87856218_87859421_87859601_87859784_87859902_87860293
ENSMUST00000005041.15	chr7	+	2183	12	FSM	ENSMUSG00000030435.17	ENSMUST00000005041.15	2183	12	0	0	0	0	multi-exon	FALSE	canonical	3	1559	junction_7	130.155406157663	1217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCCTCATCTGTGTCCA	72	False	NA	33	True	ATTAAA	-23	NA	5065141	5082937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ENSMUST00000005051.6	chr7	+	1766	8	FSM	ENSMUSG00000063229.16	ENSMUST00000005051.6	1766	8	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	2898.88755580904	9248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGCTCTTTTATTA	NA	False	NA	18	True	AATAAA	-14	NA	46496554	46505050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_46496813_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ENSMUST00000005053.14	chr17	-	948	4	FSM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	16.0485374896143	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGGGGGCGTGTGTGTCTG	3468	False	NA	-8	True	NA	NA	NA	5490518	5461144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_5461743_5483716_5483855_5489806_5489908_5490407
ENSMUST00000005066.9	chr9	-	2436	11	FSM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	0	0	0	0	multi-exon	TRUE	canonical	3	469	junction_6	51.6454257412987	824	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTGTGGCACACCTT	NA	False	NA	-13	True	AATAAA	-38	NA	64160913	64093051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
ENSMUST00000005073.13	chr5	+	1323	8	FSM	ENSMUSG00000004948.13	ENSMUST00000005073.13	1323	8	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_4	3.97953950776689	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGTGGTTTAATG	NA	False	NA	NA	False	AATAAA	-13	NA	136008952	136017478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_136009297_136011492_136011612_136013015_136013120_136013201_136013386_136014398_136014517_136016108_136016201_136016325_136016463_136017253
ENSMUST00000005077.7	chr5	+	903	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	0	0	0	0	multi-exon	FALSE	canonical	3	2181	junction_2	11	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTCCAGAGTTATTA	NA	False	NA	7	True	AATAAA	-25	NA	135916772	135918417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135917289_135917902_135917967_135918094
ENSMUST00000005120.12	chr8	-	1441	9	FSM	ENSMUSG00000004994.13	ENSMUST00000005120.12	1441	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	76.6823806359714	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCCTTGTTTCTAAACT	NA	False	NA	-22	True	ATTAAA	-15	NA	84996976	84984929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84985556_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ENSMUST00000005185.8	chr10	+	603	3	FSM	ENSMUSG00000005054.8	ENSMUST00000005185.8	603	3	0	0	0	0	multi-exon	TRUE	canonical	3	3631	junction_2	117.5	19399	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGTGTCCTTAGTTTT	NA	False	NA	23	True	AATATA	-18	NA	78261502	78263456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_78261692_78262760_78262863_78263144
ENSMUST00000005234.13	chr5	-	3089	15	FSM	ENSMUSG00000005103.13	ENSMUST00000005234.13	3089	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	233.56139122164	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATCACTGGCTCTAT	NA	False	NA	-7	True	ATTAAA	-16	NA	38719149	38684155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692684_38694481_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ENSMUST00000005256.14	chr15	-	2889	16	FSM	ENSMUSG00000005125.14	ENSMUST00000005256.14	2889	16	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_13	7.67854152818099	256	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTCTTTTCCTCTCC	NA	False	NA	0	True	AATAAA	-18	NA	66841489	66801166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66831210_66831247_66832320_66832402_66841352
ENSMUST00000005292.15	chr8	+	1500	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	0	0	0	0	multi-exon	FALSE	canonical	3	3496	junction_3	236.69169820676	16628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTAGGCTCTGACCC	NA	False	NA	NA	False	AATAAA	-37	NA	85696239	85701463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUST00000005336.9	chr11	-	2313	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	0	0	0	0	multi-exon	FALSE	canonical	3	762	junction_10	82.7371742326265	1724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8530	False	NA	-5	True	AATAAA	-17	NA	69572672	69563940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ENSMUST00000005365.15	chr2	-	1352	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	0	0	0	0	multi-exon	FALSE	canonical	3	811	junction_6	34.6121365997536	3185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	False	NA	-10	True	NA	NA	NA	69036538	69024238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
ENSMUST00000005394.13	chr16	+	1996	12	FSM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_10	35.0072011482124	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGATATGGTATGTTGT	NA	False	NA	10	True	AATAAA	-20	NA	18631043	18654011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUST00000005487.12	chr15	-	1298	4	FSM	ENSMUSG00000005354.17	ENSMUST00000005487.12	1298	4	0	0	0	0	multi-exon	FALSE	canonical	3	1083	junction_2	92.120693778446	4742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGCTGTTCTGTGGGC	14	True	NA	-5	True	AATAAA	-19	NA	77813206	77799246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_77800058_77808742_77808867_77811891_77812155_77813106
ENSMUST00000005493.14	chr15	-	4163	10	FSM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	8.52447456836295	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTATGTTATTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	8740248	8663607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8739822
ENSMUST00000005503.5	chr17	+	4251	10	FSM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	0	0	0	0	multi-exon	FALSE	canonical	3	2207	junction_2	252.867310151411	2558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88282489	88298320	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ENSMUST00000005532.9	chr13	+	6091	20	FSM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	184.261632008595	1197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATGTGTTTTTGCTGT	NA	False	NA	12	True	ATTAAA	-27	NA	13612135	13686854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ENSMUST00000005548.8	chr8	+	1569	5	FSM	ENSMUSG00000005413.9	ENSMUST00000005548.8	1569	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	104.358456772798	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGAAGTGCATTCATGTC	NA	False	NA	10	True	AATAAA	-19	NA	75820248	75827217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_75820401_75822483_75822605_75823477_75823970_75825393_75825494_75826513
ENSMUST00000005583.12	chr7	-	901	6	FSM	ENSMUSG00000005447.13	ENSMUST00000005583.12	901	6	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_5	66.0714764478591	1747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	8499	False	NA	-2	True	ATTAAA	-15	NA	24997411	24994473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796_24996896_24997267
ENSMUST00000005601.9	chr8	-	2664	14	FSM	ENSMUSG00000005465.10	ENSMUST00000005601.9	2664	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_12	6.10848667572056	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCCAGAGTGCCTTAAC	5259	False	NA	NA	False	NA	NA	NA	84769218	84756922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84757822_84757941_84758051_84758147_84758239_84758645_84758772_84760579_84760739_84760820_84760923_84762713_84762903_84762991_84763176_84765924_84765999_84766106_84766264_84767302_84767461_84767560_84767719_84768715_84768834_84769078
ENSMUST00000005607.9	chr8	+	1788	4	FSM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_2	3.39934634239519	1425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGCTTTTTTCTCTC	5716	False	NA	23	True	AATAAA	-16	NA	84682135	84696826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_84682567_84691659_84691776_84694462_84694640_84695762
ENSMUST00000005647.4	chr2	-	1046	7	FSM	ENSMUSG00000005510.10	ENSMUST00000005647.4	1046	7	0	0	0	0	multi-exon	FALSE	canonical	3	1877	junction_6	40.2105569333339	4263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTTCCTCTGTGGTGGT	NA	False	NA	-11	True	AATAAA	-16	NA	90735171	90724979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
ENSMUST00000005711.6	chr7	-	949	6	FSM	ENSMUSG00000033916.6	ENSMUST00000005711.6	949	6	0	0	0	0	multi-exon	FALSE	canonical	3	2610	junction_5	213.695671458268	9027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAAGGCTGTGAGCTT	6935	False	NA	-11	True	AATAAA	-17	NA	12768734	12765940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768561
ENSMUST00000005798.9	chr12	-	1928	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	0	0	0	0	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	2585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGTGAAGGTCTTTTCT	NA	False	NA	-10	True	AATAAA	-20	NA	54842488	54793133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ENSMUST00000005810.9	chr6	-	2085	8	FSM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	0	0	0	0	multi-exon	FALSE	canonical	3	2400	junction_5	123.349677166756	7770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTGTCTCAGTCAGAC	NA	False	NA	2	True	AATAAA	-35	NA	83294588	83282672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ENSMUST00000005815.7	chr5	+	5214	21	FSM	ENSMUSG00000005672.13	ENSMUST00000005815.7	5214	21	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_9	204.916348786523	2381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTCTGTTTGTTTT	766	False	NA	14	True	NA	NA	NA	75735614	75817382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ENSMUST00000005825.8	chr10	+	4445	26	FSM	ENSMUSG00000005682.10	ENSMUST00000005825.8	4445	26	0	0	0	0	multi-exon	FALSE	canonical	2	78	junction_17	49.8603810655314	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139203	128157222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ENSMUST00000005826.9	chr10	+	2926	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	0	0	0	0	multi-exon	TRUE	canonical	3	1246	junction_9	132.722869167299	8064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTTGCTCTTACGTA	NA	False	NA	18	True	AATAAA	-18	NA	128173602	128198348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ENSMUST00000005830.15	chr3	+	1467	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	0	0	0	0	multi-exon	FALSE	canonical	3	3472	junction_4	166.601987449797	40435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATATGTT	4929	False	NA	NA	False	NA	NA	NA	103078970	103086468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ENSMUST00000005964.7	chr3	+	1604	9	FSM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	0	0	0	0	multi-exon	FALSE	canonical	3	1845	junction_1	151.305103598656	9813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGTATTCAGAAAACTT	4924	False	NA	NA	False	AATAAA	-18	NA	138148853	138161260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ENSMUST00000005975.8	chr17	-	2064	17	FSM	ENSMUSG00000005823.10	ENSMUST00000005975.8	2064	17	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_12	32.0784560686764	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAATAAAGAAAAAGTG	NA	False	NA	-59	True	CATAAA	-13	NA	57554689	57541971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ENSMUST00000006027.7	chr18	-	2852	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_1	38.3495436739474	2568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTAAAATGTTGTTTT	5561	False	NA	-7	True	AATAAA	-27	NA	34506422	34477937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
ENSMUST00000006029.11	chr15	+	1527	13	FSM	ENSMUSG00000078954.10	ENSMUST00000006029.11	1527	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	73.837800843019	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGGTTTTGTGCTTCTG	NA	False	NA	12	True	ATTAAA	-19	NA	84604252	84656408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_84604309_84614744_84614755_84617098_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ENSMUST00000006035.13	chr2	+	1377	13	FSM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_4	74.7846445171437	2961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCTCAGTGTGATT	NA	False	NA	16	True	AATAAA	-19	NA	155849964	155860199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ENSMUST00000006046.5	chr6	-	1384	3	FSM	ENSMUSG00000005892.5	ENSMUST00000006046.5	1384	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	3.5	461	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGCTTTGCTCTTCTG	NA	False	NA	-13	True	AATAAA	-15	NA	92221631	92219041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_92220107_92220652_92220869_92221528
ENSMUST00000006061.13	chr5	+	4433	23	FSM	ENSMUSG00000005907.15	ENSMUST00000006061.13	4433	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	19.3072696453182	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTGTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	3646065	3687230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ENSMUST00000006103.9	chr11	-	2570	11	FSM	ENSMUSG00000005949.10	ENSMUST00000006103.9	2570	11	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_10	9.23525852372309	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCGGAACGTTTACTAGA	4465	False	NA	0	True	ATTAAA	-24	NA	73089868	73074421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
ENSMUST00000006123.11	chr3	-	2631	13	FSM	ENSMUSG00000005968.15	ENSMUST00000006123.11	2631	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_11	22.9474036294596	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCCGTGGGTCTTTTA	6441	False	NA	-5	True	AATAAA	-16	NA	94566178	94520063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94546701_94546777_94566031
ENSMUST00000006137.9	chr16	-	2320	18	FSM	ENSMUSG00000005981.12	ENSMUST00000006137.9	2320	18	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_15	112.803285922348	2650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	False	NA	-3	True	ATTAAA	-22	NA	3895691	3857834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ENSMUST00000006178.5	chr7	+	1630	12	FSM	ENSMUSG00000006021.6	ENSMUST00000006178.5	1630	12	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	5.62609034427847	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTCTGGCAAGCA	NA	False	NA	32	True	NA	NA	NA	15853819	15861441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_15854107_15854414_15854498_15854636_15854722_15854794_15854850_15856959_15857036_15857124_15857199_15857696_15857807_15857879_15857958_15858641_15858718_15859637_15859774_15859861_15860033_15861042
ENSMUST00000006181.7	chr7	+	2517	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	0	0	0	0	multi-exon	FALSE	canonical	3	1130	junction_8	65.9754499795189	3437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCACATCTCATTCAT	NA	False	NA	2	True	AATAAA	-17	NA	15832382	15851900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ENSMUST00000006209.5	chr18	-	695	5	FSM	ENSMUSG00000006050.13	ENSMUST00000006209.5	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	590.993443280042	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGACTTCCTATGCCTT	NA	False	NA	NA	False	NA	NA	NA	36803338	36800481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_36800713_36800843_36800947_36801704_36801902_36803056_36803183_36803300
ENSMUST00000006217.10	chr11	+	1004	8	FSM	ENSMUSG00000006058.11	ENSMUST00000006217.10	1004	8	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_5	23.859281341282	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTTCCCCCAGTAT	3197	False	NA	21	True	AATAAA	-43	NA	95925710	95938256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95937105_95937181_95938020
ENSMUST00000006235.9	chr14	+	4743	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	0	0	0	0	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	10708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCTGTCATCATT	NA	False	NA	NA	False	ATTAAA	-18	NA	63359910	63383372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ENSMUST00000006254.6	chr7	-	1416	6	FSM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_4	26.4529771481397	2934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAAGTCTCTTGATTCC	NA	False	NA	-5	True	NA	NA	NA	29931697	29923555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
ENSMUST00000006286.9	chr11	+	2679	12	FSM	ENSMUSG00000006127.10	ENSMUST00000006286.9	2679	12	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	22.5527847321246	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGACTCCTTTGATGGG	5439	False	NA	27	True	TATAAA	-18	NA	75521813	75539697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ENSMUST00000006293.5	chr16	+	5042	3	FSM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_1	8	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGTGTTTCAGTGTCTC	3459	False	NA	20	True	AATAAA	-27	NA	17269850	17305298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_17270653_17286756_17287223_17301524
ENSMUST00000006353.14	chr13	-	2629	16	FSM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	17.6728291138937	405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTTTATTGGACTTT	NA	False	NA	NA	False	AATAAA	-23	NA	30039657	29509283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ENSMUST00000006362.4	chrX	+	1010	4	FSM	ENSMUSG00000006200.4	ENSMUST00000006362.4	1010	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	47.588514020367	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGCTCCATTGTCTTGG	NA	False	NA	14	True	AATAAA	-18	NA	36915786	36918734	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36916057_36916242_36916703_36917291_36917338_36918500
ENSMUST00000006377.13	chr4	+	2722	16	FSM	ENSMUSG00000006215.13	ENSMUST00000006377.13	2722	16	0	0	0	0	multi-exon	TRUE	canonical	3	129	junction_3	19.5436832648187	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCCTGTGGTCCCTGTG	NA	False	NA	5	True	AATAAA	-15	NA	141171964	141194536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ENSMUST00000006381.11	chr4	-	3101	9	FSM	ENSMUSG00000006219.13	ENSMUST00000006381.11	3101	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	521.665826343839	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141325535	141303372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325393
ENSMUST00000006451.8	chr14	-	1842	10	FSM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_6	38.5313724991294	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATAGTTCTGTCTCTTT	NA	False	NA	-6	True	ATTAAA	-21	NA	51022976	51002871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718_51014870_51015213_51015426_51018931_51019065_51022894
ENSMUST00000006452.13	chr14	-	1308	11	FSM	ENSMUSG00000006289.15	ENSMUST00000006452.13	1308	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	238.07706735425	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTTGTGTTTTTCAGTT	NA	False	NA	-1	True	AATAAA	-24	NA	51162287	51153138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154839_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
ENSMUST00000006462.14	chr1	-	1817	11	FSM	ENSMUSG00000006299.14	ENSMUST00000006462.14	1817	11	0	0	0	0	multi-exon	FALSE	canonical	3	1233	junction_8	50.6802722960325	4160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTGCATTTTGTG	NA	False	NA	1	True	AATAAA	-19	NA	74323897	74318998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ENSMUST00000006467.14	chr1	+	1404	10	FSM	ENSMUSG00000006304.15	ENSMUST00000006467.14	1404	10	0	0	0	0	multi-exon	FALSE	canonical	3	1867	junction_3	197.32307280632	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAATTC	7848	False	NA	17	True	NA	NA	NA	74275675	74307146	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ENSMUST00000006478.10	chr7	-	870	7	FSM	ENSMUSG00000006315.10	ENSMUST00000006478.10	870	7	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_6	21.1850314032233	2390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTGTTATGTCCATCT	9257	False	NA	-16	True	AGTAAA	-14	NA	30428965	30427129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
ENSMUST00000006496.15	chr7	+	751	5	FSM	ENSMUSG00000006333.15	ENSMUST00000006496.15	751	5	0	0	0	0	multi-exon	FALSE	canonical	3	8457	junction_1	2746.02161089457	125829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1264	False	NA	3	True	AATAAA	-18	NA	3706991	3709896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709649
ENSMUST00000006565.13	chr4	-	1793	10	FSM	ENSMUSG00000006398.16	ENSMUST00000006565.13	1793	10	0	0	0	0	multi-exon	FALSE	canonical	3	1043	junction_4	200.755117703013	1988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	False	NA	-11	True	AATAAA	-17	NA	118294549	118290097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ENSMUST00000006614.3	chr4	+	3913	17	FSM	ENSMUSG00000006445.4	ENSMUST00000006614.3	3913	17	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_7	17.9965274428152	315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTCATTCCTGGA	NA	False	NA	8	True	AATAAA	-22	NA	141028550	141056695	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_141028746_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ENSMUST00000006625.8	chr19	-	3165	3	FSM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	19	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGGATGGTTCTGGCT	7765	False	NA	NA	False	AATAAA	-17	NA	4861662	4850596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4851834_4852578_4854044_4861199
ENSMUST00000006632.8	chr19	+	2558	3	FSM	ENSMUSG00000006463.14	ENSMUST00000006632.8	2558	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	34	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCTTTTTGTTTGTTT	NA	False	NA	22	True	NA	NA	NA	4928699	4935425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4929058_4930148_4930427_4933503
ENSMUST00000006692.6	chr8	-	1756	10	FSM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_4	22.2211110833319	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	False	NA	-8	True	AATAAA	-17	NA	123170161	123160339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376_123166492_123166920_123166992_123170032
ENSMUST00000006754.14	chr11	-	3213	20	FSM	ENSMUSG00000020923.18	ENSMUST00000006754.14	3213	20	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	260.634926855464	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGTCTA	9007	False	NA	60	True	NA	NA	NA	102209922	102196749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102197593_102197681_102197826_102197908_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
ENSMUST00000006760.3	chr8	+	2189	10	FSM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	0	0	0	0	multi-exon	FALSE	canonical	3	858	junction_2	66.8792905627208	1022	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGAACCTGTCACCGTA	2586	False	NA	27	True	AATAAA	-36	NA	123294753	123299867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ENSMUST00000006764.9	chr8	-	849	5	FSM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	617.095414016342	10291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCTTCTCCTCAGTTT	NA	False	NA	-7	True	AATAAA	-15	NA	123303629	123301375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123303361_123303491
ENSMUST00000006774.11	chr7	+	2736	15	FSM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_5	47.1406925910002	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	4706	False	NA	4	True	AATAAA	-15	NA	46445526	46473224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ENSMUST00000006900.7	chr13	-	721	3	FSM	ENSMUSG00000006717.8	ENSMUST00000006900.7	721	3	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	3	1273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGGAAGTATTTTCTTT	4817	False	NA	-3	True	AATAAA	-19	NA	25015500	25001930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_25002175_25004697_25004883_25015208
ENSMUST00000006915.14	chr10	+	1791	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	1366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGAGTGTTTGCCTG	NA	False	NA	13	True	TTTAAA	-18	NA	126877800	126882234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
ENSMUST00000006956.9	chr7	-	555	4	FSM	ENSMUSG00000040026.9	ENSMUST00000006956.9	555	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	7.31816613336672	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCGCTGTCACTGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	46365124	46361421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_46361689_46362012_46362152_46364433_46364529_46365070
ENSMUST00000007005.14	chr17	-	2250	9	FSM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	0	0	0	0	multi-exon	FALSE	canonical	3	922	junction_2	90.2592619901138	1914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCTGGGAGGTATGCA	NA	False	NA	NA	False	AATAAA	-19	NA	13179634	13161776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ENSMUST00000007042.6	chr18	+	1996	20	FSM	ENSMUSG00000024474.8	ENSMUST00000007042.6	1996	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	168.043095646503	1748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTGTTGGGCATTCC	NA	False	NA	10	True	ATTAAA	-20	NA	36877708	36890692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ENSMUST00000007046.9	chr18	+	1823	12	FSM	ENSMUSG00000006850.9	ENSMUST00000007046.9	1823	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	9.25845604107201	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTTGCCTCAGTGTTGC	NA	False	NA	53	True	AATAAA	-20	NA	36868120	36875450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
ENSMUST00000007130.15	chr9	+	3623	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_2	74.0160283248135	1403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120762465	120789573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ENSMUST00000007131.16	chr11	-	4393	28	FSM	ENSMUSG00000020917.18	ENSMUST00000007131.16	4393	28	0	0	0	0	multi-exon	FALSE	canonical	3	2198	junction_15	363.337822300204	2867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418826	100367181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ENSMUST00000007139.6	chr9	+	1035	4	FSM	ENSMUSG00000006941.6	ENSMUST00000007139.6	1035	4	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_2	26.9608770051883	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCAATGCACTTTGTTT	NA	False	NA	34	True	AATAAA	-36	NA	120321556	120324396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_120321908_120323172_120323337_120323600_120323703_120323978
ENSMUST00000007207.15	chr16	-	3128	24	FSM	ENSMUSG00000022843.18	ENSMUST00000007207.15	3128	24	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_10	37.9003269459341	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTGTTGGCTCATAT	NA	False	NA	1	True	AATAAA	-39	NA	20534867	20521713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ENSMUST00000007212.9	chr16	+	2961	21	FSM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	0	0	0	0	multi-exon	FALSE	canonical	3	2673	junction_8	225.447882003801	3820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470401	20482164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ENSMUST00000007251.14	chr17	+	1945	20	FSM	ENSMUSG00000007036.16	ENSMUST00000007251.14	1945	20	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	22.1293102285439	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTATGAGATGT	NA	False	NA	32	True	AATAAA	-19	NA	35308266	35321963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ENSMUST00000007255.13	chr17	+	1342	7	FSM	ENSMUSG00000007039.13	ENSMUST00000007255.13	1342	7	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	36.6488593122472	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGGGCTGTGACTGGTTT	NA	False	NA	13	True	AATAAA	-19	NA	35278010	35281067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
ENSMUST00000007259.4	chr17	-	546	3	FSM	ENSMUSG00000073413.10	ENSMUST00000007259.4	546	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	9.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTGATGAACTATTCT	NA	False	NA	NA	False	NA	NA	NA	35293476	35290418	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35290736_35293150_35293289_35293385
ENSMUST00000007266.14	chr17	+	873	5	FSM	ENSMUSG00000007050.18	ENSMUST00000007266.14	873	5	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	596.250995806296	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	243	False	NA	26	True	AATAAA	-20	NA	35201104	35204867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35201344_35201595_35201664_35204084_35204116_35204224_35204285_35204392
ENSMUST00000007482.8	chr19	-	1764	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	0	0	0	0	multi-exon	FALSE	canonical	3	907	junction_2	10.0332779621949	4334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGAAACTCCTGTAACAC	NA	False	NA	0	True	ATTAAA	-42	NA	6107815	6103651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
ENSMUST00000007533.15	chr11	+	615	6	FSM	ENSMUSG00000078656.12	ENSMUST00000007533.15	615	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	475.771541813926	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTGTGACTCTTTA	NA	False	NA	1	True	AGTAAA	-17	NA	101144532	101148875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101148726
ENSMUST00000007602.15	chr6	+	2515	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	0	0	0	0	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	5649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTTGTCGTTTGTGCT	2664	False	NA	6	True	ATTAAA	-15	NA	122285678	122294639	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
ENSMUST00000007708.14	chr17	+	2410	15	FSM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	0	0	0	0	multi-exon	FALSE	canonical	3	1213	junction_1	77.3781135010385	7326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTAGTAATCGGAATGG	NA	False	NA	39	True	AATAAA	-24	NA	21165572	21186178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ENSMUST00000007747.10	chr17	+	2025	13	FSM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	0	0	0	0	multi-exon	TRUE	canonical	3	220	junction_6	33.8230690505755	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTATTTTGTTGGTT	9244	False	NA	16	True	AATAAA	-17	NA	57071777	57076841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ENSMUST00000007800.8	chr9	+	4046	3	FSM	ENSMUSG00000007656.14	ENSMUST00000007800.8	4046	3	0	0	0	0	multi-exon	FALSE	canonical	3	5814	junction_2	96	4332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTTTTGTCTTATTT	NA	False	NA	20	True	AATAAA	-30	NA	74944999	74967595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_74945244_74959514_74959638_74963916
ENSMUST00000007803.12	chr2	-	2417	3	FSM	ENSMUSG00000007659.19	ENSMUST00000007803.12	2417	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	89.5	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCCTTGGCTCTGCGC	NA	False	NA	-5	True	AATAAA	-22	NA	152673648	152622587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_152624203_152671346_152672023_152673522
ENSMUST00000007921.9	chr11	-	813	2	FSM	ENSMUSG00000007777.10	ENSMUST00000007921.9	813	2	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	0	1778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATGTGTATGAATGCT	5184	False	NA	-12	True	ATTAAA	-14	NA	51579480	51576212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_51576920_51579374
ENSMUST00000007993.16	chr6	-	4465	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	0	True	NA	-4	True	NA	NA	NA	29165005	29123574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ENSMUST00000008004.10	chr8	-	2137	13	FSM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	0	0	0	0	multi-exon	TRUE	canonical	3	250	junction_9	19.6148682268211	1606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGAATCCAATAGCTAC	9931	False	NA	-24	True	NA	NA	NA	70755139	70745515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
ENSMUST00000008036.9	chr9	-	499	3	FSM	ENSMUSG00000007892.9	ENSMUST00000008036.9	499	3	0	0	0	0	multi-exon	FALSE	canonical	3	11557	junction_2	345.5	371691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGACTGGTCTCACTTG	NA	False	NA	-28	True	AATAAA	-14	NA	61821824	61820565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_61820804_61821169_61821245_61821638
ENSMUST00000008280.14	chr1	-	1563	6	FSM	ENSMUSG00000008136.15	ENSMUST00000008280.14	1563	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.4	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTGTGGACTAATGAT	NA	False	NA	-2	True	AATAAA	-30	NA	43203121	43162233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_43162826_43167403_43167591_43170811_43170982_43180857_43181033_43192235_43192415_43202861
ENSMUST00000008517.13	chr7	+	3144	14	FSM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_1	77.2880572079687	1987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGTTCAATACTTGGC	2933	False	NA	NA	False	AATAAA	-21	NA	3632983	3645485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ENSMUST00000008528.8	chr7	+	1233	2	FSM	ENSMUSG00000008384.9	ENSMUST00000008528.8	1233	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTTCTTTGCAT	6589	False	NA	12	True	ATTAAA	-22	NA	27186334	27189741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27186504_27188677
ENSMUST00000008537.10	chr16	-	2858	4	FSM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	0	0	0	0	multi-exon	TRUE	canonical	3	300	junction_3	44.5146667465405	1289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACTGTAAAAGGTTGTG	NA	False	NA	-11	True	AATAAA	-21	NA	8490019	8476443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_8478968_8481450_8481574_8482118_8482287_8489976
ENSMUST00000008579.14	chr7	-	3034	7	FSM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	6.10100173924104	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTGTCATTGTCCTTT	NA	False	NA	-2	True	AATAAA	-22	NA	4448648	4428665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4447201_4447321_4448445
ENSMUST00000008594.9	chr8	+	948	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	0	0	0	0	multi-exon	FALSE	canonical	3	2641	junction_1	453.90775494587	16451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAACAGTTTAAATTGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	106587211	106605962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
ENSMUST00000008745.13	chr3	-	1081	5	FSM	ENSMUSG00000008601.13	ENSMUST00000008745.13	1081	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	5.2618912949623	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCTGCCTTCCATCTG	5701	False	NA	0	True	AATAAA	-24	NA	88455607	88449335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_88449678_88450007_88450089_88450626_88450821_88452367_88452564_88455339
ENSMUST00000008748.8	chr3	+	3330	11	FSM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	0	0	0	0	multi-exon	FALSE	canonical	3	1295	junction_8	115.436605979213	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6105	False	NA	NA	False	AATAAA	-26	NA	88461064	88477032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ENSMUST00000008812.9	chr17	-	560	5	FSM	ENSMUSG00000008668.16	ENSMUST00000008812.9	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	20050	junction_4	1387.25833481007	208677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174651	34170972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051_34174151_34174591
ENSMUST00000008826.14	chrX	+	799	7	FSM	ENSMUSG00000008682.14	ENSMUST00000008826.14	799	7	0	0	0	0	multi-exon	FALSE	canonical	3	2920	junction_1	2439.95592514838	201839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314417	73316741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73314481_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ENSMUST00000008830.10	chr17	-	3544	4	FSM	ENSMUSG00000094441.3	ENSMUST00000008830.10	3544	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	10.077477638554	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTGTGTTGTGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	33474119	33458691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33461925_33462686_33462745_33462981_33463109_33473993
ENSMUST00000008893.9	chr19	+	1888	11	FSM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_1	114.751906302248	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACCTACTGTTGTGG	3575	False	NA	18	True	AATAAA	-19	NA	4198617	4204034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4198736_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
ENSMUST00000008966.13	chr12	-	648	3	FSM	ENSMUSG00000008822.16	ENSMUST00000008966.13	648	3	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_2	28.5	1545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCTTCCCCCCCTCCCT	4291	False	NA	0	True	AATAAA	-24	NA	85327209	85319171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_85319602_85326764_85326857_85327083
ENSMUST00000009036.11	chr8	-	1354	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	0	0	0	0	multi-exon	FALSE	canonical	3	2053	junction_8	117.712573669936	6968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATCTGACTTCTTAG	NA	False	NA	-11	True	AATAAA	-22	NA	23083774	23067101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ENSMUST00000009039.6	chr15	-	570	4	FSM	ENSMUSG00000058600.14	ENSMUST00000009039.6	570	4	0	0	0	0	multi-exon	FALSE	canonical	3	4307	junction_1	558.07426825548	9477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGGTGTCTGTTTG	361	False	NA	-25	True	AATAAA	-22	NA	34443368	34440655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170
ENSMUST00000009058.10	chr5	+	4306	28	FSM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_6	57.377196351684	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	NA	False	NA	10	True	ATTAAA	-17	NA	8848185	8916315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ENSMUST00000009102.9	chr3	+	1456	6	FSM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	358.969413738831	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAATAA	2560	False	NA	NA	False	NA	NA	NA	95018332	95030362	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
ENSMUST00000009120.8	chr16	+	4987	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	99.7045016753055	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTGTTTTC	NA	False	NA	6	True	AATAAA	-15	NA	84632011	84660667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ENSMUST00000009143.8	chr2	-	3670	7	FSM	ENSMUSG00000008999.8	ENSMUST00000009143.8	3670	7	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_3	13.8734358477712	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTATTTGTGTCTT	NA	False	NA	1	True	AATAAA	-30	NA	172782114	172709804	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447
ENSMUST00000009174.15	chr2	-	2858	4	FSM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	14.3527000944073	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGTATATTAGATATTT	NA	False	NA	-7	True	AATAAA	-20	NA	37249344	37240085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37249154
ENSMUST00000009220.5	chr11	-	792	6	NIC	ENSMUSG00000009075.3	novel	2628	5	NA	NA	9109	32214	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1745	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTCTGCTCGCTGGGATT	NA	False	NA	NA	False	NA	NA	NA	4687669	4654677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr11_-_4654722_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ENSMUST00000009234.16	chr11	+	4085	21	FSM	ENSMUSG00000009090.18	ENSMUST00000009234.16	4085	21	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_7	27.5174490096738	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTCTGGCTATGGTCCC	NA	False	NA	NA	False	NA	NA	NA	4936823	4992791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ENSMUST00000009321.11	chr16	-	4320	14	FSM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_13	25.6660390814434	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	0	True	CATAAA	-17	NA	18107110	18071811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ENSMUST00000009392.6	chr7	-	1605	3	FSM	ENSMUSG00000009248.7	ENSMUST00000009392.6	1605	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTGCAGTGCCTTGTA	NA	False	NA	-9	True	TATAAA	-15	NA	142523001	142520565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_142521077_142521636_142522437_142522707
ENSMUST00000009435.12	chr10	+	2294	6	FSM	ENSMUSG00000009291.14	ENSMUST00000009435.12	2294	6	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_4	46.3188946327522	2252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATTTCTTTGTTTTGT	1291	False	NA	32	True	AATAAA	-15	NA	77417553	77434566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_77417762_77423084_77423138_77425467_77425577_77428679_77428852_77429697_77429745_77432861
ENSMUST00000009530.5	chrX	+	833	6	FSM	ENSMUSG00000001131.12	ENSMUST00000009530.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	211.264384125673	4983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCTGTATAGTGTTT	NA	False	NA	18	True	AATAAA	-19	NA	20736459	20740974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20736564_20737269_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
ENSMUST00000009679.11	chr18	+	5008	11	FSM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	0	0	0	0	multi-exon	FALSE	canonical	3	765	junction_7	139.06832852954	2322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGATTCATTTCTAG	NA	False	NA	NA	False	NA	NA	NA	68433425	68457923	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ENSMUST00000009693.15	chr2	-	798	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	0	0	0	0	multi-exon	FALSE	canonical	3	1430	junction_1	23.7421039505769	7862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGGTTTGTTTTTCTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	118310192	118306330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
ENSMUST00000009699.16	chr2	-	1733	7	FSM	ENSMUSG00000009555.17	ENSMUST00000009699.16	1733	7	0	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_2	88.3259430870807	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCGTTTCCTGTGTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	32602796	32597449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
ENSMUST00000009707.14	chr2	+	1536	5	FSM	ENSMUSG00000009563.17	ENSMUST00000009707.14	1536	5	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	20.9105236663265	393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGACCAAAGTTTCTTAC	589	False	NA	9	True	AATAAA	-20	NA	32647245	32652256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_32647463_32648682_32648949_32649538_32649715_32650600_32650729_32651507
ENSMUST00000009727.12	chr15	+	4180	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009727.12	4180	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	626.014554321401	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTGTGTCACTGTGTT	NA	False	NA	20	True	AATAAA	-20	NA	79975544	80003702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_80000055
ENSMUST00000009728.13	chr15	+	819	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	0	0	0	0	multi-exon	FALSE	canonical	3	1267	junction_2	72.7232195840274	1995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCCTGTGTGGATTA	NA	False	NA	18	True	NA	NA	NA	79975534	79997642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_79997366
ENSMUST00000009740.9	chrX	-	1933	13	FSM	ENSMUSG00000009596.10	ENSMUST00000009740.9	1933	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	4.16999866773227	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACGTCTCTAATTTCT	NA	False	NA	NA	False	NA	NA	NA	133377239	133360866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_133361415_133365048_133365109_133366370_133366484_133366656_133366891_133367272_133367375_133367824_133367898_133368646_133368689_133370864_133370921_133371128_133371259_133372140_133372275_133372779_133372859_133373654_133373717_133376939
ENSMUST00000009814.10	chrX	-	3250	30	FSM	ENSMUSG00000009670.12	ENSMUST00000009814.10	3250	30	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_17	8.2193472636908	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCATTGATCAGCTGATT	NA	False	NA	-5	True	AATAAA	-16	NA	100103245	99882253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_99882667_99883306_99883472_99892654_99892776_99893874_99893984_99895431_99895582_99920141_99920215_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
ENSMUST00000010007.9	chr4	+	1142	8	FSM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	0	0	0	0	multi-exon	FALSE	canonical	3	2820	junction_2	205.868890316143	9630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCGTTACTCTCCATTAT	NA	False	NA	NA	False	AATAAA	-14	NA	140688513	140706504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
ENSMUST00000010020.12	chr2	+	727	5	FSM	ENSMUSG00000009876.14	ENSMUST00000010020.12	727	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	3.69966214673719	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTGGACTATCTGTTAT	NA	False	NA	NA	False	AATAAA	-31	NA	152596092	152606957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_152596145_152597074_152597160_152598929_152599095_152602557_152602690_152606664
ENSMUST00000010038.10	chr11	-	1896	5	FSM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_2	15.4110350074224	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGGGTCTATAACAGCCA	NA	False	NA	3	True	NA	NA	NA	59340825	59297959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59340740
ENSMUST00000010085.4	chrX	-	2393	22	FSM	ENSMUSG00000009941.11	ENSMUST00000010085.4	2393	22	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_3	6.66632652193486	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATGTCTTGAAGTGCT	NA	False	NA	-2	True	AATAAA	-18	NA	133865503	133845276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_133845538_133845640_133845702_133850435_133850634_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133856087_133856257_133856366_133856471_133856561_133856713_133856784_133856913_133856995_133857111_133857217_133857340_133857425_133857798_133857953_133858216_133858320_133862672_133862768_133865376
ENSMUST00000010127.12	chrX	+	2473	13	FSM	ENSMUSG00000031397.12	ENSMUST00000010127.12	2473	13	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	3.8151743807532	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTATGCAGTTTGTGCC	6476	False	NA	6	True	AATAAA	-18	NA	73220864	73252106	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73221030_73225389_73225505_73234827_73234926_73237124_73237317_73237399_73237528_73240589_73240784_73241245_73241411_73244203_73244361_73246136_73246268_73248479_73248564_73249479_73249577_73249950_73250071_73251279
ENSMUST00000010191.13	chr9	+	1893	4	FSM	ENSMUSG00000010047.13	ENSMUST00000010191.13	1893	4	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	7.31816613336672	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTTGTCTTTTTCTGC	NA	False	NA	15	True	ATTAAA	-17	NA	107446315	107449975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107446433_107447302_107448270_107448690_107448781_107449256
ENSMUST00000010192.11	chr9	+	2056	12	FSM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	0	0	0	0	multi-exon	TRUE	canonical	3	631	junction_11	35.5716016363504	1723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	21	True	ATTAAA	-33	NA	107464840	107470237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ENSMUST00000010201.9	chr9	+	1441	11	FSM	ENSMUSG00000010057.9	ENSMUST00000010201.9	1441	11	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	11.6721891691319	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGAGTACTGCTTCAGCC	NA	False	NA	13	True	AATAAA	-24	NA	107419424	107422905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422231_107422443_107422587_107422689
ENSMUST00000010211.7	chr9	+	1727	5	FSM	ENSMUSG00000010067.14	ENSMUST00000010211.7	1727	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	9.63068014212911	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTGGACTCTATAGA	NA	False	NA	9	True	AATAAA	-16	NA	107431781	107439462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107432125_107434651_107434757_107434968_107435267_107435385_107435502_107438597
ENSMUST00000010239.6	chr19	-	1819	9	FSM	ENSMUSG00000010095.14	ENSMUST00000010239.6	1819	9	0	0	0	0	multi-exon	FALSE	canonical	3	2610	junction_8	198.183902915953	6185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGGGTGTTTTTGTCT	NA	False	NA	-18	True	TTTAAA	-26	NA	8691243	8684980	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
ENSMUST00000010241.14	chr19	+	2326	21	FSM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_4	71.7857924661976	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGGCTTGTTTCCCTCA	8569	False	NA	47	True	GATAAA	-26	NA	8734436	8748286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ENSMUST00000010248.4	chr19	+	748	2	FSM	ENSMUSG00000117924.2	ENSMUST00000010248.4	748	2	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_1	0	3135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTCTGTCCTCTCTCTC	6519	False	NA	NA	False	AATAAA	-38	NA	8748359	8749839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8748680_8749411
ENSMUST00000010249.7	chr19	-	818	5	FSM	ENSMUSG00000118346.2	ENSMUST00000010249.7	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	40.2833712591188	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATATATTACTTTTC	5074	False	NA	-31	True	NA	NA	NA	8751831	8749915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8751057_8751698
ENSMUST00000010254.16	chr19	+	1780	11	FSM	ENSMUSG00000010110.18	ENSMUST00000010254.16	1780	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	60.8157874239905	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	6625	False	NA	12	True	NA	NA	NA	8718852	8733006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8718940_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732240
ENSMUST00000010278.12	chr3	+	3682	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	0	0	0	0	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	3165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAAATTGCTTTTGTTGTT	NA	False	NA	12	True	AATAAA	-31	NA	105866684	105877076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ENSMUST00000010348.7	chr9	-	812	5	FSM	ENSMUSG00000079677.3	ENSMUST00000010348.7	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	56.6171352154098	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGACATGTTTTGTGT	NA	False	NA	-7	True	AATAAA	-12	NA	20984840	20978815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559_20984615_20984684
ENSMUST00000010434.8	chr1	+	3458	4	FSM	ENSMUSG00000010290.8	ENSMUST00000010434.8	3458	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	24.6080384337223	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCAGGCCTGTCATTT	NA	False	NA	NA	False	AATAAA	-15	NA	43137869	43155107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_43138023_43139874_43140042_43150157_43150534_43152345
ENSMUST00000010451.8	chr7	+	1831	3	FSM	ENSMUSG00000010307.8	ENSMUST00000010451.8	1831	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTCCTGACTTGTCTG	NA	False	NA	NA	False	AATAAA	-24	NA	46700348	46704525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_46700550_46702597_46702863_46703160
ENSMUST00000010506.10	chr11	-	1124	7	Antisense	novelGene_ENSMUSG00000010362.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4597	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACCGCGAAATTTAAACC	NA	False	NA	NA	False	NA	NA	NA	101526926	101518767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr11_-_101518891_101519098_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
ENSMUST00000010520.10	chr14	-	824	4	FSM	ENSMUSG00000010376.16	ENSMUST00000010520.10	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	1795	junction_3	42.0502345085283	8965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTCTTTCTTCTTGA	NA	False	NA	-11	True	AATAAA	-15	NA	55909581	55899719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55900083_55900871_55900955_55901268_55901317_55909251
ENSMUST00000010550.12	chr14	+	418	5	FSM	ENSMUSG00000010406.13	ENSMUST00000010550.12	418	5	0	0	0	0	multi-exon	FALSE	canonical	3	1056	junction_1	196.876230154887	11759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTGGCTTTCTTTTC	NA	False	NA	27	True	AATAAA	-28	NA	54664365	54667213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_54664418_54664490_54664549_54664627_54664696_54666040_54666106_54667038
ENSMUST00000010597.10	chr1	-	4663	21	FSM	ENSMUSG00000010453.13	ENSMUST00000010597.10	4663	21	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_19	30.7481300244421	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408262	36374810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
ENSMUST00000010736.9	chr17	-	2976	11	FSM	ENSMUSG00000010592.10	ENSMUST00000010736.9	2976	11	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_4	74.6324996231534	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCACTGACTTACTGTCC	NA	False	NA	-5	True	AATAAA	-16	NA	50600664	50586424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_50588340_50590155_50590255_50591265_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ENSMUST00000010795.5	chr9	-	1689	12	FSM	ENSMUSG00000010651.5	ENSMUST00000010795.5	1689	12	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_6	59.9400526973023	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGGTCCAGCTCTTGCT	NA	False	NA	NA	False	AGTAAA	-35	NA	118986161	118977090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_118977482_118977801_118977948_118978029_118978086_118978338_118978519_118978667_118978859_118979891_118979973_118980883_118980983_118982737_118982781_118982993_118983074_118984812_118984871_118985658_118985753_118985891
ENSMUST00000010804.4	chr9	-	2657	15	FSM	ENSMUSG00000010660.4	ENSMUST00000010804.4	2657	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_14	9.15540433686184	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCTAGTCTCTTTACAA	2838	False	NA	NA	False	TATAAA	-25	NA	118922570	118900594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118922425
ENSMUST00000010807.6	chr19	+	3460	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	0	0	0	0	multi-exon	TRUE	canonical	3	652	junction_7	60.0436480355873	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160251	10174238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ENSMUST00000010904.5	chr7	-	757	2	FSM	ENSMUSG00000010760.6	ENSMUST00000010904.5	757	2	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGGTCTGTGTAGTTC	NA	False	NA	2	True	AATAAA	-27	NA	143056278	143055281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_143055554_143055793
ENSMUST00000010940.11	chr6	-	1736	13	FSM	ENSMUSG00000010796.12	ENSMUST00000010940.11	1736	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.42307313450798	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTGTGCTCATTTGTC	-6	True	NA	NA	False	AATAAA	-24	NA	18109056	18050962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_18051403_18054526_18054641_18055433_18055540_18071963_18072074_18073760_18073818_18074824_18074901_18075759_18075885_18076503_18076639_18077151_18077264_18103498_18103611_18104774_18104898_18108401_18108502_18108930
ENSMUST00000010974.9	chr15	+	1411	5	FSM	ENSMUSG00000010830.9	ENSMUST00000010974.9	1411	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	14.7986485869487	395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCAAGTATTTATTTATA	NA	False	NA	11	True	AATAAA	-16	NA	79400611	79411940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_79400842_79407011_79407113_79409004_79409164_79409867_79410121_79411272
ENSMUST00000011055.7	chr2	+	919	7	FSM	ENSMUSG00000010911.13	ENSMUST00000011055.7	919	7	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_6	40.9691618442729	1882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAAATTTTCTTGATGT	4593	False	NA	25	True	AATAAA	-21	NA	102904019	102922989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922809
ENSMUST00000011058.9	chr2	-	2506	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGATATGACATGCAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	102903858	102851419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
ENSMUST00000011398.13	chr11	-	2250	6	FSM	ENSMUSG00000011254.17	ENSMUST00000011398.13	2250	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	12.8	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTCCTACAGAATGAGT	6301	False	NA	NA	False	AATAAA	-26	NA	45846321	45837669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
ENSMUST00000011450.8	chr8	+	2681	14	FSM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_4	56.2515483021626	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGCTCCTCTGGTCTTC	2157	False	NA	NA	False	GATAAA	-14	NA	70495462	70524997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ENSMUST00000011493.6	chr7	+	1619	9	FSM	ENSMUSG00000011349.6	ENSMUST00000011493.6	1619	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	6.69771416230941	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCGAGAGTTGATTATC	NA	False	NA	4	True	NA	NA	NA	24569481	24577076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_24569598_24571902_24572131_24572204_24572360_24573346_24573424_24573622_24573804_24574331_24574459_24575172_24575234_24575373_24575549_24576577
ENSMUST00000011896.8	chr19	+	1775	4	FSM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	0	0	0	0	multi-exon	FALSE	canonical	3	5418	junction_2	350.959003620398	14536	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTACTGTTTGTCTTGTGT	4060	False	NA	0	True	AATAAA	-17	NA	41900361	41907099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_41900626_41904043_41904319_41905081_41905263_41906044
ENSMUST00000011981.5	chr8	+	1536	5	FSM	ENSMUSG00000011837.5	ENSMUST00000011981.5	1536	5	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	11.3880419739304	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGATTCCCCCTTTGAC	NA	False	NA	16	True	AATAAA	-16	NA	4303079	4306220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_4303305_4304281_4304402_4304550_4304620_4304991_4305374_4305480
ENSMUST00000012104.7	chr15	-	2175	9	FSM	ENSMUSG00000011960.13	ENSMUST00000012104.7	2175	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	11.1439445440113	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98465517	98441091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98442490_98444404_98444476_98444625_98444790_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
ENSMUST00000012152.13	chr16	-	4045	10	FSM	ENSMUSG00000003166.21	ENSMUST00000012152.13	4045	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	135.772503989233	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709557	17658218	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ENSMUST00000012259.9	chr16	-	3410	18	FSM	ENSMUSG00000012114.18	ENSMUST00000012259.9	3410	18	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_13	36.2216360814255	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCATCTACCTTTT	NA	False	NA	-13	True	AATAAA	-26	NA	17540811	17469074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ENSMUST00000012348.9	chr3	-	1064	8	FSM	ENSMUSG00000040562.13	ENSMUST00000012348.9	1064	8	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_6	40.3692143766479	2174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCAGTGTATTATTTT	2042	False	NA	-4	True	AATAAA	-13	NA	107893769	107889017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107889455_107891251_107891363_107891444_107891541_107892364_107892466_107892562_107892645_107892933_107892999_107893349_107893426_107893673
ENSMUST00000012440.14	chr17	-	2426	10	FSM	ENSMUSG00000012296.17	ENSMUST00000012440.14	2426	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	101.660412679532	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTCTTTCTCCTTCCC	5822	False	NA	-27	True	AATAAA	-21	NA	46593936	46568796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593271_46593366_46593885
ENSMUST00000012540.5	chr6	+	2211	4	FSM	ENSMUSG00000012396.13	ENSMUST00000012540.5	2211	4	0	0	0	0	multi-exon	FALSE	canonical	3	4116	junction_3	205.443152450718	46039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	18	True	AATAAA	-19	NA	122684526	122691592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_122684893_122688496_122688763_122689587_122689675_122690100
ENSMUST00000012587.4	chr19	+	4819	22	FSM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_17	34.0452546631592	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGCTGCCTGTACAT	NA	False	NA	8	True	ATTAAA	-15	NA	37364850	37410307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ENSMUST00000012627.5	chr6	-	670	4	FSM	ENSMUSG00000012483.5	ENSMUST00000012627.5	670	4	0	0	0	0	multi-exon	FALSE	canonical	3	1410	junction_2	59.4474557908074	7207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCAATTGTTTT	NA	False	NA	-11	True	AATAAA	-14	NA	8259173	8255935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_8256248_8256694_8256804_8257686_8257762_8258999
ENSMUST00000012679.15	chr6	-	4251	23	FSM	ENSMUSG00000012535.15	ENSMUST00000012679.15	4251	23	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_17	54.5301683125804	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	NA	False	NA	-2	True	TTTAAA	-5	NA	29609886	29540825	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ENSMUST00000012734.10	chr5	+	1024	7	FSM	ENSMUSG00000029131.15	ENSMUST00000012734.10	1024	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	922.805580222015	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTGTATTTGGTCAGA	4601	False	NA	13	True	AATAAA	-21	NA	29940992	29962967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29961231_29961337_29962545
ENSMUST00000013299.11	chr8	-	1275	7	FSM	ENSMUSG00000013155.11	ENSMUST00000013299.11	1275	7	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	11.5854314646552	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTGTGTTCCATAGGAG	NA	False	NA	-15	True	ATTAAA	-14	NA	106434565	106430283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455
ENSMUST00000013304.8	chr8	-	1629	8	FSM	ENSMUSG00000013160.8	ENSMUST00000013304.8	1629	8	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	38.5115938016444	1625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGTCTGTCTGCTCC	NA	False	NA	-10	True	AATAAA	-18	NA	106292679	106251096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106255886_106257446_106257626_106265952_106266125_106292414
ENSMUST00000013338.14	chr9	-	3924	16	FSM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	0	0	0	0	multi-exon	TRUE	canonical	3	517	junction_5	114.47891605978	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108526579	108480140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
ENSMUST00000013737.13	chr1	-	1623	13	FSM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	0	0	0	0	multi-exon	FALSE	canonical	3	1142	junction_12	107.460457843804	2864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTAATGTGTCTTTCTT	NA	False	NA	-1	True	ATTAAA	-28	NA	171074691	171062421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
ENSMUST00000013766.13	chr5	+	966	7	FSM	ENSMUSG00000013622.16	ENSMUST00000013766.13	966	7	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_6	22.1108319357027	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTACCTGTGCGTG	908	False	NA	12	True	AATAAA	-25	NA	31205978	31211967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31206101_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
ENSMUST00000013842.12	chr1	-	2501	4	FSM	ENSMUSG00000013698.13	ENSMUST00000013842.12	2501	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	8.37987005998436	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTGATTCTAGAATCT	NA	False	NA	-4	True	AATAAA	-20	NA	172034371	172024294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_172026258_172026677_172026834_172027974_172028149_172034163
ENSMUST00000013845.13	chr14	-	1173	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	0	0	0	0	multi-exon	FALSE	canonical	3	3717	junction_4	299.373048590253	14047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTATCTCCATTTAATA	NA	False	NA	NA	False	AATAAA	-40	NA	31923855	31902118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ENSMUST00000013882.10	chr6	-	2072	11	FSM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	56.1066840937869	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCTCCTTAATGTCATT	NA	False	NA	-33	True	AATAAA	-17	NA	106777026	106757161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772956_106776951
ENSMUST00000013910.5	chr17	+	1142	3	FSM	ENSMUSG00000013766.12	ENSMUST00000013910.5	1142	3	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_2	34.5	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGAGAGCTGTCTGTG	NA	False	NA	20	True	NA	NA	NA	35295912	35297780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35296183_35296812_35296939_35297034
ENSMUST00000013966.8	chr9	-	888	3	FSM	ENSMUSG00000013822.8	ENSMUST00000013966.8	888	3	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_2	52.5	2397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGCCGCTGTACTTCTT	7944	False	NA	-8	True	AATAAA	-15	NA	22028468	22024286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_22024976_22025103_22025240_22028405
ENSMUST00000013970.9	chr10	-	3307	10	FSM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_3	43.7148447820759	613	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAAGTTTTTGTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	127047424	127032935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
ENSMUST00000014022.15	chr8	+	3929	8	FSM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	13.0243100800474	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAATGTGTTATGTTT	NA	False	NA	7	True	AATAAA	-17	NA	26609395	26633899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
ENSMUST00000014058.11	chr7	+	1373	6	FSM	ENSMUSG00000030693.11	ENSMUST00000014058.11	1373	6	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_4	14.5134420452214	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAATGTGTGTGCCTCT	355	False	NA	9	True	ATTAAA	-16	NA	43430458	43434834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43430571_43430922_43431050_43432159_43432344_43432880_43433156_43433739_43433874_43434293
ENSMUST00000014080.13	chr5	+	662	7	FSM	ENSMUSG00000013936.13	ENSMUST00000014080.13	662	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	1.91485421551268	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGACCATTGGCTCAT	3605	False	NA	NA	False	AATAAA	-21	NA	122239013	122244917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_122239093_122239811_122239902_122240758_122240835_122241893_122241999_122242889_122242969_122243050_122243100_122244733
ENSMUST00000014220.15	chr16	+	838	5	FSM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_3	20.9568008054665	1618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAATAGTTTTTATG	NA	False	NA	9	True	AATAAA	-21	NA	32238519	32247917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32238746_32241637_32241772_32244058_32244129_32245675_32245740_32247573
ENSMUST00000014221.13	chr2	+	2609	7	FSM	ENSMUSG00000014077.14	ENSMUST00000014221.13	2609	7	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_2	25.1197133741609	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGAGTTTTACCCGG	NA	False	NA	NA	False	AATAAA	-25	NA	119378177	119417508	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_119378399_119391211_119391285_119397130_119397212_119402248_119402377_119411175_119411238_119415010_119415134_119415587
ENSMUST00000014321.5	chr11	+	1784	7	FSM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	45.7666181111663	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGATGTGTGGTCCCATT	9241	False	NA	10	True	TATAAA	-18	NA	62770280	62786011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ENSMUST00000014389.6	chr11	+	2174	7	FSM	ENSMUSG00000014245.9	ENSMUST00000014389.6	2174	7	0	0	0	0	multi-exon	TRUE	canonical	3	156	junction_1	58.9736287580211	27771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTTTACATAAAGCAGTAT	NA	False	NA	NA	False	GATAAA	-4	NA	62349285	62405243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729
ENSMUST00000014438.5	chr18	-	572	3	FSM	ENSMUSG00000014294.5	ENSMUST00000014438.5	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	2929	junction_2	68.5	15177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGATGTCGTACGTCAT	NA	False	NA	NA	False	NA	NA	NA	36877610	36875384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_36875712_36877233_36877341_36877472
ENSMUST00000014445.7	chr16	-	596	5	FSM	ENSMUSG00000014301.14	ENSMUST00000014445.7	596	5	0	0	0	0	multi-exon	FALSE	canonical	3	1132	junction_4	70.3491293478462	7004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCCTGTTTGAGAAGGT	NA	False	NA	-15	True	AATAAA	-28	NA	4442852	4434327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4435868_4442714
ENSMUST00000014457.15	chr15	-	503	4	FSM	ENSMUSG00000014313.16	ENSMUST00000014457.15	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	8539	junction_3	472.446822404384	57816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTTGGTTATTAAT	NA	False	NA	-1	True	AATAAA	-22	NA	35938392	35932121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_35932244_35935430_35935560_35937300_35937431_35938270
ENSMUST00000014546.15	chr7	-	1949	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_2	86.0289931030289	2200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTACTCTTTGCAAACG	NA	False	NA	NA	False	AATAAA	-30	NA	46569717	46538696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ENSMUST00000014684.6	chr17	-	1046	8	FSM	ENSMUSG00000061613.14	ENSMUST00000014684.6	1046	8	0	0	0	0	multi-exon	FALSE	canonical	3	4626	junction_6	706.208473585007	7236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877866	31866054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ENSMUST00000014694.11	chr6	-	5334	12	FSM	ENSMUSG00000014550.15	ENSMUST00000014694.11	5334	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_10	18.3307536376882	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTGTGCTTAAAACGT	NA	False	NA	1	True	ATTAAA	-24	NA	92191906	92163692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ENSMUST00000014698.10	chr6	-	1107	7	FSM	ENSMUSG00000014554.14	ENSMUST00000014698.10	1107	7	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_5	13.5369863706809	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGTTCGTTTATTTC	NA	False	NA	-3	True	AATAAA	-23	NA	83483951	83457198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
ENSMUST00000014750.15	chr11	-	1711	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	1702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTAAAGTCGTAACT	NA	False	NA	0	True	ATTAAA	-28	NA	70537884	70535021	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ENSMUST00000014812.13	chr5	+	3146	18	FSM	ENSMUSG00000014668.16	ENSMUST00000014812.13	3146	18	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_11	67.7699140155478	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283725	110319838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ENSMUST00000014911.12	chr17	+	1891	9	FSM	ENSMUSG00000014767.18	ENSMUST00000014911.12	1891	9	0	0	0	0	multi-exon	TRUE	canonical	3	123	junction_2	77.8728932299295	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGCTTGTCTGTT	NA	False	NA	23	True	AAGAAA	-31	NA	15720149	15737689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_15720287_15721415_15721465_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ENSMUST00000014913.11	chr17	-	1758	6	FSM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	0	0	0	0	multi-exon	FALSE	canonical	3	4315	junction_4	304.330741135364	23869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGCTGCACTAGTTG	NA	False	NA	NA	False	NA	NA	NA	15718560	15695282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
ENSMUST00000015000.12	chr8	+	785	6	FSM	ENSMUSG00000014856.13	ENSMUST00000015000.12	785	6	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_4	56.0556865982391	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCGTGTGGGTGATGATG	251	False	NA	18	True	AATAAA	-20	NA	106052985	106055689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055091_106055239_106055325_106055403
ENSMUST00000015003.10	chr8	+	1993	10	FSM	ENSMUSG00000014859.10	ENSMUST00000015003.10	1993	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	369.398142461925	626	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATCTGGTTCTTTGG	NA	False	NA	21	True	AATAAA	-17	NA	106024294	106032002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
ENSMUST00000015017.8	chr2	+	1203	6	FSM	ENSMUSG00000014873.16	ENSMUST00000015017.8	1203	6	0	0	0	0	multi-exon	TRUE	canonical	3	245	junction_5	33.4388995034227	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATATGTGTATCATTGTT	NA	False	NA	37	True	CATAAA	-32	NA	26806378	26810195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809738
ENSMUST00000015124.15	chr1	-	1133	5	FSM	ENSMUSG00000014980.15	ENSMUST00000015124.15	1133	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_4	96.4219243740758	1482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCGTAATCATCCATCA	NA	False	NA	-5	True	AATAAA	-29	NA	152262433	152246485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_152247035_152247504_152247647_152259012_152259149_152259449_152259532_152262209
ENSMUST00000015146.16	chr15	+	5215	23	FSM	ENSMUSG00000015002.19	ENSMUST00000015146.16	5215	23	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_16	48.5493912261498	380	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGCATTTTTATTATAG	NA	False	NA	17	True	AATAAA	-24	NA	65658888	65745665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ENSMUST00000015160.6	chr8	+	2206	10	FSM	ENSMUSG00000015016.9	ENSMUST00000015160.6	2206	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	8.97458689169274	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGACCTGTGAGCTGTG	9534	False	NA	13	True	AATAAA	-25	NA	123502243	123544619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_123502330_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298_123540411_123544130
ENSMUST00000015171.11	chr8	-	2557	14	FSM	ENSMUSG00000015027.12	ENSMUST00000015171.11	2557	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	4.2966892442366	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATCCTGGTCTTTTGTT	NA	False	NA	-4	True	NA	NA	NA	123338202	123304980	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_123305937_123307789_123307908_123311650_123311773_123318176_123318280_123318939_123319077_123322504_123322609_123325258_123325399_123325777_123325906_123326011_123326079_123327213_123327358_123330116_123330220_123330877_123330953_123331878_123332003_123337966
ENSMUST00000015236.4	chr2	+	722	5	FSM	ENSMUSG00000015092.10	ENSMUST00000015236.4	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	2396	junction_4	232.166965781095	5956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCCTGGATTTTTCCT	NA	False	NA	17	True	NA	NA	NA	25447858	25452094	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980_25451075_25451862
ENSMUST00000015256.15	chr6	-	3067	18	FSM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_9	125.074538329783	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	20	False	6217138	-3	True	AATAAA	-16	NA	6217118	6041217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ENSMUST00000015278.15	chr7	-	3443	13	FSM	ENSMUSG00000015134.16	ENSMUST00000015278.15	3443	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4.11214326382511	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTTTTTCATTGGAG	NA	False	NA	0	True	AATAAA	-19	NA	66077265	66040637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_66042510_66048435_66048511_66049825_66049984_66051718_66051884_66055721_66055907_66057548_66057652_66058913_66059028_66061249_66061379_66062105_66062168_66062648_66062779_66068850_66068992_66071958_66072064_66077061
ENSMUST00000015361.11	chrX	+	1544	5	FSM	ENSMUSG00000015217.12	ENSMUST00000015361.11	1544	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	352.483687565822	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCACCAGTCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	70599546	70604282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_70599615_70601662_70601814_70602038_70602179_70602703_70602879_70603272
ENSMUST00000015391.10	chr4	+	1552	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	1871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATCAAGTGAGTCTT	NA	False	NA	10	True	AATAAA	-21	NA	53011879	53022060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ENSMUST00000015433.4	chrX	-	761	3	FSM	ENSMUSG00000015289.5	ENSMUST00000015433.4	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	1433	junction_2	31	5252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGCCTCTAAATTTTC	4493	False	NA	-18	True	AATAAA	-30	NA	73397224	73395766	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_73396105_73396479_73396609_73396930
ENSMUST00000015456.10	chr10	+	1284	4	FSM	ENSMUSG00000015312.10	ENSMUST00000015456.10	1284	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	10.2089285540757	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCTCGTTGTATTTTA	248	False	NA	5	True	AATAAA	-14	NA	80765906	80768038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80766194_80766281_80766384_80766862_80767086_80767366
ENSMUST00000015467.9	chr3	+	2364	4	FSM	ENSMUSG00000052310.10	ENSMUST00000015467.9	2364	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	8.60232526704263	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATGGTATCTGATTCT	NA	False	NA	-1	True	AATAAA	-16	NA	90155478	90160919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_90155567_90156252_90156471_90156632_90156764_90158992
ENSMUST00000015509.11	chr15	+	4052	27	FSM	ENSMUSG00000015365.16	ENSMUST00000015509.11	4052	27	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_23	13.9454240549008	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTCTGTCTCAGAATG	2992	False	NA	4	True	AATAAA	-19	NA	88867196	88939355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88891877_88895565_88895625_88896102_88896399_88902352_88902453_88904463_88904643_88905366_88905514_88906203_88906326_88907815_88907916_88908869_88909035_88910665_88910840_88931009_88931160_88937580_88937689_88938429_88938568_88938713_88938834_88939018
ENSMUST00000015605.15	chr17	+	2566	18	FSM	ENSMUSG00000015461.16	ENSMUST00000015605.15	2566	18	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_9	22.8588265568706	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGGCCACCTTCCTAGTG	9741	False	NA	11	True	AATAAA	-24	NA	34866119	34874048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
ENSMUST00000015680.11	chr13	+	1152	7	FSM	ENSMUSG00000015536.15	ENSMUST00000015680.11	1152	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	16.9844700306551	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATAGATCCTGTCTCC	NA	False	NA	NA	False	AATAAA	-18	NA	114954812	114965259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ENSMUST00000015719.16	chr17	+	823	4	FSM	ENSMUSG00000015575.16	ENSMUST00000015719.16	823	4	0	0	0	0	multi-exon	FALSE	canonical	3	1134	junction_3	173.829418300432	5232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	37	True	AATAAA	-25	NA	26895343	26918621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26895553_26901651_26901700_26914328_26914459_26918185
ENSMUST00000015725.16	chr17	+	1098	6	FSM	ENSMUSG00000024191.16	ENSMUST00000015725.16	1098	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	9.09945053286186	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTGGTAAATGCTTAAC	1994	False	NA	15	True	AATAAA	-15	NA	27000039	27011495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_27000151_27002418_27002512_27005670_27005763_27008668_27008771_27009899_27010019_27010914
ENSMUST00000015800.16	chr9	+	2394	9	FSM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	0	0	0	0	multi-exon	FALSE	canonical	3	3928	junction_3	6050.21958150074	94854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2167	False	NA	10	True	AATAAA	-20	NA	40712279	40716496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ENSMUST00000015812.12	chrX	-	1626	7	FSM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_6	98.6728601659713	1883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTACTGCTTGAATATAA	NA	False	NA	-7	True	AATAAA	-14	NA	99670174	99666491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
ENSMUST00000015855.8	chr3	-	3140	8	FSM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	23.7538396466589	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTTTCTTTTTAAAA	4350	False	NA	NA	False	ATTAAA	-19	NA	95189387	95160984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
ENSMUST00000015858.12	chr3	+	2216	11	FSM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_10	31.9782738746168	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGGTTAGTTTTTTTCT	4318	False	NA	45	True	AATAAA	-31	NA	95222394	95230910	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ENSMUST00000015893.13	chr3	+	1381	7	FSM	ENSMUSG00000015749.13	ENSMUST00000015893.13	1381	7	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	557.690301352123	1938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGGTGTAGTTTGGTGC	NA	False	NA	12	True	ATTAAA	-15	NA	95836589	95852877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845316_95851618_95851674_95852491
ENSMUST00000015894.12	chr3	+	2863	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTCA	NA	False	NA	NA	False	AATACA	-4	NA	95801280	95805600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
ENSMUST00000015901.11	chr10	+	3471	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGCATGTGTTCTCTCT	1122	False	NA	14	True	NA	NA	NA	7668654	7698899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ENSMUST00000015903.12	chr14	-	1538	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_4	16.1322658049017	4048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTACATTGTCTATTTTC	NA	False	NA	NA	False	AATAAA	-31	NA	47025868	47013023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
ENSMUST00000015934.13	chr2	-	1173	9	FSM	ENSMUSG00000015790.17	ENSMUST00000015934.13	1173	9	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_4	27.1834048639974	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTCAGTCTGAAACC	NA	False	NA	-5	True	AATAAA	-19	NA	26806542	26803394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
ENSMUST00000015950.12	chr5	-	1380	7	FSM	ENSMUSG00000015806.13	ENSMUST00000015950.12	1380	7	0	0	0	0	multi-exon	FALSE	canonical	3	819	junction_4	94.8542741964395	2646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	-19	True	AATAAA	-15	NA	45607578	45591394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
ENSMUST00000016033.9	chr10	+	2029	19	FSM	ENSMUSG00000015889.9	ENSMUST00000016033.9	2029	19	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_6	42.1416262935671	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAGTGTCATTTTTG	NA	False	NA	21	True	AATACA	-20	NA	93289272	93320736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ENSMUST00000016081.13	chr13	-	2046	9	FSM	ENSMUSG00000015937.16	ENSMUST00000016081.13	2046	9	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_5	233.718279933342	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCGTGTTTTGTGTTAC	5905	False	NA	-5	True	AGTAAA	-18	NA	56283444	56221431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ENSMUST00000016087.4	chr3	-	729	2	FSM	ENSMUSG00000015943.12	ENSMUST00000016087.4	729	2	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	0	1871	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACGGTGCTCTTAATAC	NA	False	NA	NA	False	AATAAA	-21	NA	96104902	96103903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_96104596_96104865
ENSMUST00000016105.9	chr1	-	2771	13	FSM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_9	76.3848079718008	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCTAAAAGACCAATGGC	NA	False	NA	NA	False	AATAAA	-16	NA	177624077	177590527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ENSMUST00000016115.6	chr14	+	2119	13	FSM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_4	26.6816364232448	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACACTGATTTGAGATAAT	NA	False	NA	21	True	ATTAAA	-25	NA	29700293	29715176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917
ENSMUST00000016143.9	chr5	+	5196	10	FSM	ENSMUSG00000029636.12	ENSMUST00000016143.9	5196	10	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_1	19.5037191768236	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTCTGCTTATTTATA	NA	False	NA	15	True	AATAAA	-19	NA	146321794	146410425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
ENSMUST00000016144.12	chr13	+	1598	6	FSM	ENSMUSG00000021759.15	ENSMUST00000016144.12	1598	6	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	66.7730484551964	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTTGTAGTCAGTTGCAA	9637	False	NA	14	True	AATAAA	-29	NA	112937325	113004428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_112937801_112971392_112971548_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ENSMUST00000016309.16	chr1	-	2378	12	FSM	ENSMUSG00000006301.18	ENSMUST00000016309.16	2378	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	38.8406364690682	496	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGAGTTGCTGTGGCTT	NA	False	NA	-6	True	AATAAA	-22	NA	74343564	74327405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74343281
ENSMUST00000016396.8	chr2	-	421	3	FSM	ENSMUSG00000016252.8	ENSMUST00000016396.8	421	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1326.5	23945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTTGTTTCTGTTCTA	NA	False	NA	-4	True	AATAAA	-22	NA	174305898	174302864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_174303015_174304292_174304423_174305757
ENSMUST00000016400.9	chr2	-	1441	6	FSM	ENSMUSG00000016256.11	ENSMUST00000016400.9	1441	6	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_4	13.5292276202302	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTACTTTATTTACA	5329	False	NA	0	True	AGTAAA	-17	NA	174280832	174269285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_174269776_174270370_174270537_174270848_174271000_174275280_174275461_174279957_174280122_174280542
ENSMUST00000016401.15	chr2	-	1553	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	0	0	0	0	multi-exon	FALSE	canonical	3	812	junction_2	54.463198583998	2442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGCAGCTCTTCCCAT	NA	False	NA	-4	True	AATAAA	-45	NA	174314874	174306859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
ENSMUST00000016452.11	chrX	+	1732	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	5946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTCACACTTTTATTA	NA	False	NA	7	True	AATAAA	-16	NA	36137947	36147875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
ENSMUST00000016463.4	chrX	+	1240	4	FSM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	0	0	0	0	multi-exon	FALSE	canonical	3	11014	junction_3	650.055895032625	45998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTCGTTGTTTGTTT	NA	False	NA	29	True	AATAAA	-31	NA	36059303	36062460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36059495_36060495_36060983_36061388_36061530_36062039
ENSMUST00000016553.5	chrX	+	4230	9	FSM	ENSMUSG00000016409.5	ENSMUST00000016553.5	4230	9	0	0	0	0	multi-exon	TRUE	canonical	3	360	junction_3	33.4381425171914	540	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTAATGTGTGGATT	NA	False	NA	24	True	AATAAA	-24	NA	36390447	36414399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
ENSMUST00000016571.8	chrX	-	419	3	FSM	ENSMUSG00000016427.8	ENSMUST00000016571.8	419	3	0	0	0	0	multi-exon	FALSE	canonical	3	2951	junction_1	110	13767	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTTTATTTTTATGAA	2312	False	NA	-1	True	AATAAA	-20	NA	36454816	36451240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_36451395_36453526_36453617_36454641
ENSMUST00000016678.14	chrX	-	1769	9	FSM	ENSMUSG00000016534.16	ENSMUST00000016678.14	1769	9	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	278.250982702667	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGTTTCAATTTGTAA	NA	False	NA	-1	True	AATAAA	-18	NA	37545331	37493938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_37494449_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ENSMUST00000016681.15	chrX	-	3354	20	FSM	ENSMUSG00000031095.16	ENSMUST00000016681.15	3354	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	1064	junction_17	109.947758937101	1475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTCATTTAAAGATACT	8292	False	NA	-28	True	AATAAA	-20	NA	37653402	37622150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539
ENSMUST00000016703.8	chr11	-	1993	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	0	0	0	0	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	21598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTAGCCTTGGCCACAA	NA	False	NA	9	True	AATAAA	-39	NA	115915330	115912786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ENSMUST00000016771.13	chr15	-	7433	41	FSM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	0	0	0	0	multi-exon	TRUE	canonical	3	307	junction_27	78.3427565254121	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGTGTCTGGGTGTTT	NA	False	NA	-2	True	AATAAA	-17	NA	77726375	77644786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ENSMUST00000016781.8	chr15	-	1013	7	FSM	ENSMUSG00000016637.8	ENSMUST00000016781.8	1013	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	104.002270274366	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGGCTTCTGTTCTTAGT	NA	False	NA	-2	True	AATAAA	-14	NA	78058307	78043662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_78043909_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051330_78052112_78052193_78057968
ENSMUST00000016902.5	chr15	+	942	5	FSM	ENSMUSG00000016758.5	ENSMUST00000016902.5	942	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	7.58287544405155	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCTTAGGTCGTCCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	83411062	83428835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_83411138_83425495_83425644_83427265_83427365_83427780_83427899_83428333
ENSMUST00000016977.15	chr5	-	638	6	Antisense	novelGene_ENSMUSG00000104761.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5681	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGCGCTTCCCGGGCCG	NA	False	NA	NA	False	NA	NA	NA	100952337	100946492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr5_-_100946727_100947417_100947480_100949773_100949858_100950918_100950977_100951835_100951896_100952197
ENSMUST00000017153.4	chr2	-	2458	5	FSM	ENSMUSG00000017009.4	ENSMUST00000017153.4	2458	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	6.36396103067893	514	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCAGTTTTATTTTTG	NA	False	NA	47	True	AATAAA	-24	NA	164285106	164266166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_164268158_164270812_164271009_164271599_164271647_164273106_164273234_164285009
ENSMUST00000017188.14	chr13	-	1504	8	FSM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	171.60728779539	1556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8459	False	NA	-7	True	AATAAA	-19	NA	34119979	34101909	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119609_34119778_34119904
ENSMUST00000017270.8	chr11	-	1542	8	FSM	ENSMUSG00000053654.8	ENSMUST00000017270.8	1542	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	18.9510648023497	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	100160697	100153712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235
ENSMUST00000017288.9	chr2	-	2828	5	FSM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_2	50.2792203599061	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGGGATGTTTTCTGC	NA	False	NA	-9	True	AATAAA	-16	NA	51039123	51020449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038736
ENSMUST00000017290.11	chr11	-	6572	23	FSM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_5	36.2819537137853	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442705	101379589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ENSMUST00000017354.13	chr11	-	3410	26	FSM	ENSMUSG00000017210.15	ENSMUST00000017354.13	3410	26	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_19	25.7353919729232	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTGTGGGGACAGTT	NA	False	NA	-2	True	AATAAA	-23	NA	98620261	98595416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
ENSMUST00000017408.14	chr4	+	2790	25	FSM	ENSMUSG00000017264.17	ENSMUST00000017408.14	2790	25	0	0	0	0	multi-exon	TRUE	canonical	3	466	junction_4	49.4747234847138	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148642885	148666858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ENSMUST00000017451.7	chr2	-	1055	6	FSM	ENSMUSG00000017307.17	ENSMUST00000017451.7	1055	6	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	116.717779279765	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8166	False	NA	-1	True	AATAAA	-19	NA	164646802	164634687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_164634931_164637001_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646609
ENSMUST00000017544.9	chr11	-	3050	11	FSM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	5.98748695196908	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTTGGTGTATC	5359	False	NA	-2	True	ATTAAA	-15	NA	97944288	97927448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
ENSMUST00000017548.7	chr11	+	751	6	FSM	ENSMUSG00000017404.13	ENSMUST00000017548.7	751	6	0	0	0	0	multi-exon	FALSE	canonical	3	9068	junction_1	2898.60244945732	189324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGCTGTGTCTT	NA	False	NA	15	True	AATAAA	-33	NA	97917749	97921318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_97917817_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ENSMUST00000017549.13	chr11	-	2809	15	FSM	ENSMUSG00000017405.15	ENSMUST00000017549.13	2809	15	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_10	13.5103890486136	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6248	False	NA	0	True	AATAAA	-14	NA	78067501	78056931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
ENSMUST00000017567.14	chr11	+	2245	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	4333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGATACATGATTGAAT	NA	False	NA	130	True	AATAAA	-18	NA	80274128	80287074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ENSMUST00000017572.14	chr11	+	2848	14	FSM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_5	68.6804624122448	2937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCCTTTCTTGAGTGCT	NA	False	NA	16	True	AATAAA	-20	NA	80319450	80364074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ENSMUST00000017597.5	chr11	-	1998	8	FSM	ENSMUSG00000017453.5	ENSMUST00000017597.5	1998	8	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_3	30.9654184996286	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCGGTGGTCTTTATTT	NA	False	NA	-2	True	AATAAA	-22	NA	77784922	77771440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_77772081_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
ENSMUST00000017604.10	chr8	-	744	6	FSM	ENSMUSG00000006519.12	ENSMUST00000017604.10	744	6	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	96.6531944635044	2817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGACAAGAAATTCTCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	123159669	123151514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_123151827_123152924_123153007_123153674_123153759_123153967_123154043_123154393_123154464_123159548
ENSMUST00000017759.9	chr11	-	3720	7	FSM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	46.4997013132582	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTGTTCCCTCCATG	NA	False	NA	14	True	NA	NA	NA	78427097	78413675	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426898
ENSMUST00000017808.14	chr2	-	1843	11	FSM	ENSMUSG00000017664.17	ENSMUST00000017808.14	1843	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	88.3464204141854	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5702	False	NA	-34	True	AATAAA	-18	NA	165129747	165118473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125328_165125447_165125521_165129703
ENSMUST00000017821.12	chr11	-	2476	9	FSM	ENSMUSG00000017677.12	ENSMUST00000017821.12	2476	9	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_4	86.5338625914734	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCATGGGTTGCATT	975	False	NA	-8	True	ATTAAA	-28	NA	79145497	79130197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ENSMUST00000017831.16	chr11	+	3029	20	FSM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_18	134.011803341732	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACCTTTTCAAGTATTTA	NA	False	NA	34	True	AATAAA	-45	NA	80099944	80157593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
ENSMUST00000017839.3	chr11	+	1984	5	FSM	ENSMUSG00000020707.7	ENSMUST00000017839.3	1984	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	3.96074487943871	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGAGTTCATTGGGT	NA	False	NA	34	True	NA	NA	NA	80074676	80090583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_80075082_80080049_80080194_80084711_80084875_80087698_80087774_80089386
ENSMUST00000017851.4	chr2	-	3683	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGATACCTTAGATTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	163487051	163465191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
ENSMUST00000017859.10	chr11	+	2197	10	FSM	ENSMUSG00000017715.12	ENSMUST00000017859.10	2197	10	0	0	0	0	multi-exon	TRUE	canonical	1	46	junction_7	99.2782596518803	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117877710	117914837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905472_117905549_117910432_117910559_117914230
ENSMUST00000017867.10	chr2	+	849	5	FSM	ENSMUSG00000017723.12	ENSMUST00000017867.10	849	5	0	0	0	0	multi-exon	FALSE	canonical	3	478	junction_3	30.4251129825347	4108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCTTGCCTCACTTTC	113	False	NA	26	True	AATAAA	-32	NA	164404498	164410430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_164404725_164405227_164405372_164405976_164406133_164407711_164407859_164410254
ENSMUST00000017891.14	chr11	-	2462	9	FSM	ENSMUSG00000017747.14	ENSMUST00000017891.14	2462	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	5.82961190818051	1536	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAATGTATGTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	100661783	100656857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100657851_100658109_100658196_100658839_100658974_100659043_100659116_100659210_100659404_100659853_100660356_100660481_100660604_100660895_100661177_100661704
ENSMUST00000017900.9	chr13	+	5142	24	FSM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	0	0	0	0	multi-exon	FALSE	canonical	3	635	junction_9	57.8026758755535	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911815	73964873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ENSMUST00000017922.9	chr13	-	315	3	FSM	ENSMUSG00000017778.15	ENSMUST00000017922.9	315	3	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_2	5048	4088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGATGATCTGAAAATTG	NA	False	NA	-93	True	AAGAAA	-5	NA	86194893	86193013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_86193028_86193845_86193973_86194719
ENSMUST00000017945.15	chr11	+	1965	8	FSM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	39.4052726193346	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTTTAAGTCCTTGT	8246	False	NA	18	True	AATAAA	-22	NA	100978125	100983033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUST00000017946.6	chr11	-	3165	9	FSM	ENSMUSG00000017802.15	ENSMUST00000017946.6	3165	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	11.6162601554889	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTTCGTTGTGTACT	9795	False	NA	1	True	AATAAA	-29	NA	101010719	100987338	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
ENSMUST00000017975.7	chr17	+	2366	6	FSM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_1	72.5131712173726	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGAGTTTTCTCTGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	53786261	53814708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_53786637_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ENSMUST00000017981.10	chr11	+	2097	4	FSM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	10.0332779621949	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCCGTCCCCTACCCCT	NA	False	NA	17	True	AATAAA	-24	NA	100513701	100518433	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100513835_100515017_100515126_100515768_100516011_100516819
ENSMUST00000018002.13	chr2	+	2248	13	FSM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	53.5787971122906	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162859273	162888061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ENSMUST00000018005.10	chr2	+	3651	14	FSM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	0	0	0	0	multi-exon	FALSE	canonical	3	2736	junction_8	179.963737307165	5118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGACTCCTCCTTTTT	NA	False	NA	26	True	NA	NA	NA	162896606	162926608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ENSMUST00000018212.13	chr11	-	5906	25	FSM	ENSMUSG00000018068.14	ENSMUST00000018212.13	5906	25	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_24	28.5226213829577	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148376	86101506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029
ENSMUST00000018274.10	chr11	-	3675	9	FSM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	79.8474130764423	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	776	False	NA	-11	True	AATAAA	-22	NA	120882156	120852574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUST00000018311.5	chr11	+	2070	15	FSM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	0	0	0	0	multi-exon	TRUE	canonical	3	120	junction_11	11.573412528335	383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAATGCAGGGTGTG	875	False	NA	-2	True	AATAAA	-1	NA	98249193	98271925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
ENSMUST00000018313.6	chr15	-	1865	8	FSM	ENSMUSG00000018169.13	ENSMUST00000018313.6	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	11.4749060731561	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCCAGCTTCCTGCT	NA	False	NA	-4	True	ATTAAA	-17	NA	78657675	78640081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_78640845_78641496_78641583_78643392_78643559_78645005_78645092_78648514_78648669_78651017_78651121_78651341_78651391_78657217
ENSMUST00000018333.13	chr1	+	1845	11	FSM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_8	227.497274708951	2989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTTGTTACCTAATTC	NA	False	NA	NA	False	ATTAAA	-13	NA	143653018	143683204	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143682421
ENSMUST00000018353.14	chr2	+	5232	11	FSM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_9	12.953763931769	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCCCCTTTCTTCACA	NA	False	NA	18	True	AATAAA	-18	NA	163916057	163997444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
ENSMUST00000018383.10	chr11	+	1267	4	FSM	ENSMUSG00000018239.10	ENSMUST00000018383.10	1267	4	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	30.2691628926573	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGATGTAAGTTTCAAGT	NA	False	NA	14	True	TATAAA	-27	NA	53215505	53224128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_53215569_53218095_53218255_53221513_53221559_53223128
ENSMUST00000018430.7	chr11	+	798	6	FSM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	0	0	0	0	multi-exon	FALSE	canonical	3	5742	junction_5	304.149305440601	21164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACGTTTCTGTGTGAAGG	NA	False	NA	23	True	AATAAA	-13	NA	70416211	70418475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
ENSMUST00000018431.13	chr11	-	1159	7	FSM	ENSMUSG00000018287.13	ENSMUST00000018431.13	1159	7	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_3	39.5179284207392	4324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATGTGGATACTAGTCC	NA	False	NA	-9	True	AATAAA	-33	NA	70560242	70554596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70555047_70555145_70555303_70555403_70555494_70555608_70555694_70555813_70555903_70556122_70556191_70560022
ENSMUST00000018437.3	chr11	-	861	3	FSM	ENSMUSG00000018293.5	ENSMUST00000018437.3	861	3	0	0	0	0	multi-exon	FALSE	canonical	3	9692	junction_2	172	18264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGACCTGTGTTGGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	70545470	70542675	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70543048_70543612_70543806_70545174
ENSMUST00000018449.11	chr11	+	7442	42	FSM	ENSMUSG00000020850.15	ENSMUST00000018449.11	7442	42	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_5	157.019499238112	1923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTGCTGTTA	NA	False	NA	18	True	AATAAA	-15	NA	75377641	75400273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ENSMUST00000018470.10	chr2	+	3013	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	0	0	0	0	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTGTGGATTGATGTG	NA	False	NA	21	True	AATAAA	-16	NA	163836879	163860508	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ENSMUST00000018476.14	chr15	-	2914	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	35.5343495789637	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTTGTTGTTATTGT	NA	False	NA	2	True	AATAAA	-21	NA	35155952	34875641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
ENSMUST00000018482.13	chr11	-	2810	18	FSM	ENSMUSG00000020400.18	ENSMUST00000018482.13	2810	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_17	76.4117873477302	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	6845	False	NA	-5	True	CATAAA	-18	NA	54853738	54801612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54853658
ENSMUST00000018506.13	chr11	-	2054	11	FSM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	0	0	0	0	multi-exon	FALSE	canonical	3	2002	junction_5	417.039386629129	7834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTTTTCTTAATTGA	9666	False	NA	NA	False	AATAAA	-27	NA	106890367	106879454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ENSMUST00000018516.11	chr11	+	2696	20	FSM	ENSMUSG00000018372.14	ENSMUST00000018516.11	2696	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	15.3330523078346	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTACTGCTTTTGAAT	5119	False	NA	10	True	AATAAA	-12	NA	106680100	106709679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ENSMUST00000018549.8	chr11	-	2477	5	FSM	ENSMUSG00000018405.8	ENSMUST00000018549.8	2477	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	44.51404272811	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTGGAGTTGATTTGT	NA	False	NA	-4	True	AATAAA	-23	NA	84710341	84703886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425_84709520_84709662
ENSMUST00000018561.14	chr1	-	4767	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATTTGCTGGATTACAA	NA	False	NA	NA	False	AATAAA	-16	NA	51955087	51789152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ENSMUST00000018568.4	chr11	-	1788	13	Antisense	novelGene_ENSMUSG00000020537.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1531	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGCGCACCAAGAATGGA	NA	False	NA	NA	False	NA	NA	NA	60359580	60345416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr11_-_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ENSMUST00000018569.14	chr11	-	3813	18	FSM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	18.4312056730034	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACAGTATGTGGATTTTT	8527	False	NA	-8	True	ATTAAA	-7	NA	86698572	86659671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
ENSMUST00000018572.11	chr11	-	3758	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	0	0	0	0	multi-exon	FALSE	canonical	3	816	junction_2	49.6891336209437	1726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGAGTCCATTTTTTCTT	NA	False	NA	92	True	TATAAA	-7	NA	88755412	88721617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ENSMUST00000018577.8	chr11	-	3158	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGAAAATGTCTCTC	1101	False	NA	NA	False	TATAAA	-12	NA	107080207	107057488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ENSMUST00000018644.3	chr11	+	1845	2	FSM	ENSMUSG00000018500.3	ENSMUST00000018644.3	1845	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGCACTGGCTTCTTGCA	8723	False	NA	NA	False	AATAAA	-20	NA	62139809	62157279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_62140263_62155887
ENSMUST00000018681.14	chr11	-	1755	13	FSM	ENSMUSG00000018537.17	ENSMUST00000018681.14	1755	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	97.2593897209359	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATATACATACTTATTT	NA	False	NA	8	True	NA	NA	NA	97591323	97580645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97588814_97588887_97590031_97590127_97590361_97590475_97591085
ENSMUST00000018685.9	chr11	-	3105	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTAGAGCGATCTAC	7435	False	NA	-21	True	AATAAA	-19	NA	97657382	97636440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
ENSMUST00000018710.13	chr11	-	2524	11	FSM	ENSMUSG00000018566.15	ENSMUST00000018710.13	2524	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3.57910603363466	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGTGTCCTGTGCTGGA	NA	False	NA	2	True	ATTAAA	-40	NA	69838975	69833368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69834399_69834884_69835089_69835612_69835715_69835827_69835933_69836094_69836283_69836388_69836552_69836663_69836780_69836894_69837020_69837111_69837285_69837393_69837511_69838774
ENSMUST00000018714.13	chr11	-	1485	8	FSM	ENSMUSG00000018570.18	ENSMUST00000018714.13	1485	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_7	3.28260722659316	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGCTGGGAGCTGCG	9745	False	NA	-13	True	AATAAA	-15	NA	69791764	69788188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69788319_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790637_69791128
ENSMUST00000018716.10	chr11	+	2006	5	FSM	ENSMUSG00000018572.11	ENSMUST00000018716.10	2006	5	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_3	63.9193828192982	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGTCCTATTTGG	2317	False	NA	16	True	AATAAA	-26	NA	69886602	69890835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889126_69889959_69890063
ENSMUST00000018718.8	chr11	-	2020	19	FSM	ENSMUSG00000018574.15	ENSMUST00000018718.8	2020	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_17	40.1080331229001	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGGGGGTGATGGAGT	NA	False	NA	-57	True	NA	NA	NA	69906213	69901069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905942_69906022_69906088
ENSMUST00000018737.13	chr11	-	2300	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_9	66.8521493786341	2208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3676	False	NA	-2	True	AATAAA	-22	NA	55310906	55285325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ENSMUST00000018743.5	chr11	+	2522	4	FSM	ENSMUSG00000018599.6	ENSMUST00000018743.5	2522	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	26.4701089281224	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619223	60623777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_60619394_60621108_60621262_60621455_60621619_60621741
ENSMUST00000018744.15	chr11	-	2858	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	0	0	0	0	multi-exon	TRUE	canonical	3	983	junction_2	78.1211180853749	3245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCTCATATTATTTATT	NA	False	NA	-8	True	AATAAA	-19	NA	60702091	60678929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ENSMUST00000018755.10	chr11	-	1182	7	FSM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_5	18.9245578254523	419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTAGTGTCTGGCCTGA	NA	False	NA	-2	True	AATAAA	-22	NA	53959840	53945753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53954460_53954613_53959665
ENSMUST00000018792.12	chr11	-	1571	4	FSM	ENSMUSG00000018648.16	ENSMUST00000018792.12	1571	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	40.077702307171	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTTATTAATCATTTTG	NA	False	NA	-14	True	AATAAA	-15	NA	83959627	83938866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_83940137_83941657_83941747_83959306_83959407_83959515
ENSMUST00000018795.13	chr11	-	2151	16	FSM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_10	48.5691259958423	1482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGTGTGTCAGATAT	NA	False	NA	-4	True	ATTAAA	-17	NA	84020426	83969745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ENSMUST00000018803.12	chr11	-	1994	7	FSM	ENSMUSG00000018659.13	ENSMUST00000018803.12	1994	7	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_4	10.434983894999	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTAACTTGATTCCAT	NA	False	NA	-2	True	AATAAA	-25	NA	96834812	96828650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_96829910_96830080_96830152_96830473_96830603_96830841_96830896_96831681_96831782_96833235_96833361_96834556
ENSMUST00000018841.3	chr11	+	1822	13	Antisense	novelGene_ENSMUSG00000018697.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	938	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCCCAGTAGGCAACTT	NA	False	NA	NA	False	NA	NA	NA	84313680	84404348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr11_+_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ENSMUST00000018871.8	chr11	-	1235	7	FSM	ENSMUSG00000018727.20	ENSMUST00000018871.8	1235	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	88.6372131531422	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600843	113588997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_113589493_113590661_113590809_113593238_113593336_113594096_113594193_113597242_113597396_113599629_113599681_113600647
ENSMUST00000018875.13	chr11	+	5625	22	FSM	ENSMUSG00000035152.15	ENSMUST00000018875.13	5625	22	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_14	47.3312733095844	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTTGTGGTATGGACT	1959	False	NA	NA	False	AATAAA	-16	NA	83193308	83295861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ENSMUST00000018880.14	chr11	-	2382	9	FSM	ENSMUSG00000018736.15	ENSMUST00000018880.14	2382	9	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_5	15.9530561335438	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCGAGATTGCTTTATTT	NA	False	NA	NA	False	AATAAA	-24	NA	68743961	68712259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_68713492_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
ENSMUST00000018905.12	chr11	-	1321	7	FSM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_4	37.1427426738163	3409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTAGTGTGCATTCT	6761	False	NA	-4	True	AATAAA	-33	NA	69553468	69547522	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
ENSMUST00000018914.3	chr2	-	714	5	FSM	ENSMUSG00000018770.10	ENSMUST00000018914.3	714	5	0	0	0	0	multi-exon	FALSE	canonical	3	2058	junction_4	989.165146727279	48474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741670	73738790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741595
ENSMUST00000018918.12	chr11	-	1230	6	FSM	ENSMUSG00000018774.14	ENSMUST00000018918.12	1230	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	17.4653943556966	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTCTTTCCTCATTAA	3250	False	NA	-1	True	AATAAA	-19	NA	69556979	69555038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69555331_69555576_69555748_69555860_69555940_69556072_69556193_69556328_69556763_69556845
ENSMUST00000018965.4	chr19	-	1044	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_1	12	4244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCAGAGTGTGCTAC	NA	False	NA	-5	True	AATAAA	-15	NA	42117498	42111711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_42112288_42113186_42113466_42117309
ENSMUST00000018992.4	chr11	+	2109	15	Antisense	novelGene_ENSMUSG00000018848.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2637	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGCCGGAAGCGGAAGTG	NA	False	NA	NA	False	NA	NA	NA	35699207	35725333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr11_+_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
ENSMUST00000019026.10	chr11	+	2431	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	0	0	0	0	multi-exon	FALSE	canonical	3	2561	junction_3	172.211545276531	5537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCCAGCTTAAAATTACT	NA	False	NA	14	True	NA	NA	NA	97206541	97220746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
ENSMUST00000019038.15	chr11	+	3784	11	FSM	ENSMUSG00000059248.14	ENSMUST00000019038.15	3784	11	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	218.744622791053	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	696	False	NA	91	True	AATAAA	-16	NA	117157071	117253139	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_117157422_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUST00000019043.13	chr11	+	2069	10	FSM	ENSMUSG00000018899.18	ENSMUST00000019043.13	2069	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.2573879677132	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGTGGCTTTTTATTTA	NA	False	NA	10	True	TATAAA	-17	NA	53661320	53668149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_53661518_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ENSMUST00000019050.12	chr11	+	2230	16	FSM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_12	14.0816665680357	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAATAGCCTTATTTT	NA	False	NA	15	True	AATAAA	-17	NA	53991788	54022478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
ENSMUST00000019063.3	chr11	+	1000	5	FSM	ENSMUSG00000018919.11	ENSMUST00000019063.3	1000	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.95818764390649	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATGTGCCAGTGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	70396069	70402004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70396331_70400619_70400701_70401040_70401178_70401394_70401579_70401667
ENSMUST00000019065.10	chr11	-	3435	17	FSM	ENSMUSG00000018921.12	ENSMUST00000019065.10	3435	17	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_9	48.6591701917532	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGTGCTGCTTTGGCT	NA	False	NA	-27	True	AATAAA	-13	NA	70300854	70283708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ENSMUST00000019067.8	chr11	+	902	3	FSM	ENSMUSG00000018923.14	ENSMUST00000019067.8	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	11	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCTCTCTCTCGC	NA	False	NA	NA	False	AATAAA	-20	NA	70342744	70344553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70342890_70343033_70343165_70343927
ENSMUST00000019076.10	chr11	+	2198	12	FSM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_6	27.3405217988137	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCAAGCCTGCTCTTTC	NA	False	NA	NA	False	NA	NA	NA	60822858	60843637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ENSMUST00000019135.14	chr11	-	3816	17	FSM	ENSMUSG00000020740.14	ENSMUST00000019135.14	3816	17	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_6	42.6075385788712	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3381	False	NA	-2	True	AATAAA	-15	NA	115494877	115475080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ENSMUST00000019169.8	chr8	+	854	8	FSM	ENSMUSG00000002395.15	ENSMUST00000019169.8	854	8	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	107.997165495683	4640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTCTTCAGTGCTAG	NA	False	NA	22	True	AATAAA	-23	NA	71819860	71822376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
ENSMUST00000019183.14	chr9	+	1746	12	FSM	ENSMUSG00000019039.15	ENSMUST00000019183.14	1746	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_8	26.2473926292634	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGTGAGGCGTGTTC	NA	False	NA	15	True	AATAAA	-17	NA	108447084	108449973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
ENSMUST00000019198.7	chr5	+	786	5	FSM	ENSMUSG00000019054.14	ENSMUST00000019198.7	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	76.6823806359714	2546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGTGTGAGCGAGCA	3268	False	NA	20	True	AATAAA	-21	NA	136990930	136995088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_136991083_136991852_136991986_136993946_136994024_136994418_136994525_136994770
ENSMUST00000019199.14	chr4	-	3243	19	FSM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	12.7855049099544	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGTCTGGTTATACTTC	NA	False	NA	NA	False	AATAAA	-39	NA	148021224	147994209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187_148017280_148021058
ENSMUST00000019226.14	chr7	-	2811	10	FSM	ENSMUSG00000019082.19	ENSMUST00000019226.14	2811	10	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_9	20.9708792800344	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTAAGAGTCTGTGCTTG	207	False	NA	-14	True	AATAAA	-23	NA	141017805	141009656	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
ENSMUST00000019229.15	chr4	+	1145	7	FSM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	88.2754527349226	2304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	32	True	NA	NA	NA	118266562	118272308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_118266584_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ENSMUST00000019231.12	chrX	+	2189	10	FSM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	0	0	0	0	multi-exon	TRUE	canonical	3	647	junction_4	26.5934179176579	1761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTAGATTTTTTTTTC	NA	False	NA	46	True	NA	NA	NA	73340702	73348327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ENSMUST00000019283.10	chr8	+	1836	11	FSM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	49.1426495012225	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047130	71049938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ENSMUST00000019287.9	chr18	+	2002	12	FSM	ENSMUSG00000019143.16	ENSMUST00000019287.9	2002	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	36.3770429831556	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGGTCTTTTGAGGTTT	NA	False	NA	NA	False	GGGGCT	-45	NA	36916283	36924747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36923186_36923304_36923521_36923669_36924122
ENSMUST00000019323.11	chr5	+	1456	9	FSM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	0	0	0	0	multi-exon	FALSE	canonical	3	4657	junction_8	277.596267085853	15513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTGTAGATTTCCTTT	453	False	NA	38	True	AGTAAA	-25	NA	135807333	135819245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ENSMUST00000019354.11	chr6	-	1312	9	FSM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_3	98.1488028454754	5496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTTGTTGTTCCTTATG	NA	False	NA	-3	True	ATTAAA	-19	NA	120799754	120772204	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
ENSMUST00000019362.15	chr11	+	2968	15	FSM	ENSMUSG00000020888.17	ENSMUST00000019362.15	2968	15	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_4	30.5160546571265	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAAGCCTCTGGCTCC	7135	False	NA	12	True	AATAAA	-16	NA	69891420	69900937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
ENSMUST00000019382.17	chr8	-	1158	13	FSM	ENSMUSG00000031708.18	ENSMUST00000019382.17	1158	13	0	0	0	0	multi-exon	FALSE	canonical	3	3555	junction_3	302.48290814891	11564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321106	84298328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ENSMUST00000019386.10	chr16	-	3591	8	FSM	ENSMUSG00000005251.16	ENSMUST00000019386.10	3591	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	9.512612465478	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCAGACTATTATTTCTT	NA	False	NA	2	True	AATAAA	-22	NA	97564987	97543132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_97545445_97547059_97547325_97548492_97548597_97549222_97549382_97551292_97551343_97552693_97552843_97556267_97556560_97564727
ENSMUST00000019405.4	chr8	+	3314	7	FSM	ENSMUSG00000019261.4	ENSMUST00000019405.4	3314	7	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	20.5236990384829	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGGTCTTACTGTCTT	NA	False	NA	13	True	AATAAA	-13	NA	71358575	71370171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71358772_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
ENSMUST00000019422.6	chr8	+	2236	11	FSM	ENSMUSG00000019278.6	ENSMUST00000019422.6	2236	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.46554469023269	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCAATGACCCCTTTGTG	NA	False	NA	NA	False	AATAAA	-27	NA	123912980	123928551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_123913181_123920771_123920926_123925452_123925586_123925783_123925917_123926032_123926184_123926360_123926431_123926679_123926857_123926945_123927031_123927105_123927182_123927376_123927513_123927630
ENSMUST00000019443.15	chr14	+	3485	21	FSM	ENSMUSG00000047098.19	ENSMUST00000019443.15	3485	21	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_6	30.6031044176894	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCTCAGCATCCCGGGG	4174	False	NA	38	True	AATAAA	-41	NA	55829164	55841150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ENSMUST00000019447.15	chr11	-	1291	8	FSM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_7	41.1021624139417	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCTTTGCCTTTGGGA	NA	False	NA	NA	False	GATAAA	-14	NA	100986262	100982648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
ENSMUST00000019456.5	chr11	+	2397	15	FSM	ENSMUSG00000019312.11	ENSMUST00000019456.5	2397	15	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	7.18736135624932	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGTCCTGTCTGGCA	NA	False	NA	18	True	AATAAA	-18	NA	98337659	98346199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_98338076_98341591_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408_98345503_98345684
ENSMUST00000019470.14	chr11	+	2664	11	FSM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	0	0	0	0	multi-exon	FALSE	canonical	3	1173	junction_6	119.560068584791	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGGTGCTGTACTCTG	NA	False	NA	34	True	ATTAAA	-35	NA	101207038	101214363	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUST00000019482.8	chr3	-	4632	9	FSM	ENSMUSG00000019338.14	ENSMUST00000019482.8	4632	9	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_8	42.3657807080195	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGTGTTTGGTGCCT	NA	False	NA	-2	True	AAAAAG	-13	NA	94922549	94914012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922421
ENSMUST00000019506.9	chr8	+	616	3	Antisense	novelGene_ENSMUSG00000019362.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5960	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGGCGGGGCCACGTGC	1631	False	NA	NA	False	NA	NA	NA	84972866	84976348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr8_+_84973323_84976102_84976159_84976244
ENSMUST00000019514.10	chr7	-	2290	6	FSM	ENSMUSG00000019370.11	ENSMUST00000019514.10	2290	6	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_1	82.9925297843125	3467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGACTCTTCCGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	16658039	16649303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16653559_16653591_16657765
ENSMUST00000019517.10	chr11	+	1646	12	Fusion	ENSMUSG00000087249.2_ENSMUSG00000032615.15	novel	1316	5	NA	NA	7715	21347	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3022	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCCGGCCAAGCGCCGCG	2251	False	NA	NA	False	ACTAAA	-24	NA	59708620	59730664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_chr11_+_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ENSMUST00000019576.15	chr8	+	1656	11	FSM	ENSMUSG00000005481.19	ENSMUST00000019576.15	1656	11	0	0	0	0	multi-exon	FALSE	canonical	3	2216	junction_5	95.6715736256073	6542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAACGTGCCATCTTTTT	NA	False	NA	99	True	NA	NA	NA	84441805	84449977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUST00000019577.10	chr8	+	1522	7	FSM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	0	0	0	0	multi-exon	FALSE	canonical	3	964	junction_1	101.245027312731	810	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAACTCATTCTGTAGAC	NA	False	NA	16	True	NA	NA	NA	84379305	84391323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_84379367_84387587_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
ENSMUST00000019614.13	chr8	-	2677	19	FSM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_12	44.2084358744927	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTCTTGACCTCCTTC	1011	False	NA	-4	True	AATACA	-16	NA	3671316	3660086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ENSMUST00000019649.4	chr11	+	1499	2	FSM	ENSMUSG00000019505.8	ENSMUST00000019649.4	1499	2	0	0	0	0	multi-exon	FALSE	canonical	3	35417	junction_1	0	77985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCACTTGTGAAAT	NA	False	NA	25	True	AATAAA	-24	NA	62441996	62444039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_62442422_62442965
ENSMUST00000019662.11	chr5	+	3479	15	FSM	ENSMUSG00000019518.12	ENSMUST00000019662.11	3479	15	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_6	9.89356624586021	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGGTGCATTCCTATA	8077	False	NA	18	True	NA	NA	NA	138170263	138178691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138170511_138170610_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ENSMUST00000019677.12	chr4	+	2543	13	FSM	ENSMUSG00000028708.17	ENSMUST00000019677.12	2543	13	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_1	27.9607860325055	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCAGCCTTGGTGGT	NA	False	NA	10	True	AATAAA	-16	NA	115696394	115736447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ENSMUST00000019679.12	chr8	-	2263	8	FSM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	11.6741472616082	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCATTTTTCTCACCT	4668	False	NA	0	True	TTTAAA	-1	NA	70687116	70672821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70673528_70674755_70674894_70675167_70675300_70676193_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686759
ENSMUST00000019701.9	chrX	+	2722	4	FSM	ENSMUSG00000031383.9	ENSMUST00000019701.9	2722	4	0	0	0	0	multi-exon	TRUE	canonical	3	583	junction_1	9.62635271879577	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGAGGTTGTTGCTTCTT	NA	False	NA	28	True	AATAAA	-22	NA	72683024	72687120	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72683248_72683798_72684411_72684952_72685409_72685689
ENSMUST00000019723.8	chr17	-	1710	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	0	0	0	0	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	4822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAACCACCTGAAGCCA	NA	False	NA	-29	True	NA	NA	NA	56490920	56482743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
ENSMUST00000019734.11	chr11	-	2741	6	FSM	ENSMUSG00000019590.17	ENSMUST00000019734.11	2741	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	37.6690854680599	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105835238	105824527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105834936
ENSMUST00000019803.9	chr9	+	834	7	FSM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_3	22.4258035902098	2175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTAGTTGCTCTGGAT	8482	False	NA	29	True	AATAAA	-29	NA	110485570	110540674	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153_110540231_110540318
ENSMUST00000019833.5	chr6	+	479	2	FSM	ENSMUSG00000019689.5	ENSMUST00000019833.5	479	2	0	0	0	0	multi-exon	FALSE	canonical	3	741	junction_1	0	2395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTGGTTTTTGTGTGCT	9929	False	NA	9	True	ATTAAA	-17	NA	38511757	38516384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_38511946_38516093
ENSMUST00000019854.13	chr3	+	1226	6	FSM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	297.101329515706	2189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTAAAAGCTTTATAAAT	NA	False	NA	26	True	AATAAA	-28	NA	87826812	87830979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUST00000019882.16	chr7	+	819	6	FSM	ENSMUSG00000019738.16	ENSMUST00000019882.16	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	1146	junction_5	44.9239357136037	5424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCCCGTGTTTATTTC	NA	False	NA	18	True	AATAAA	-18	NA	29931372	29932815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ENSMUST00000019907.8	chr10	-	1940	5	FSM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	0	0	0	0	multi-exon	FALSE	canonical	3	762	junction_1	15.5623744974859	3394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGTGTGCAGGTTTTT	NA	False	NA	-9	True	AATAAA	-45	NA	5755600	5749159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755258
ENSMUST00000019939.12	chr10	+	1401	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	0	0	0	0	multi-exon	FALSE	canonical	3	2006	junction_3	141.176800108548	3630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	False	NA	12	True	AATAAA	-13	NA	42378026	42411366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
ENSMUST00000019945.15	chr10	-	2129	12	FSM	ENSMUSG00000019809.17	ENSMUST00000019945.15	2129	12	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_6	16.7987602848376	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTTAGCCATTAATTT	NA	False	NA	NA	False	AATAAA	-34	NA	13428883	13399859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
ENSMUST00000019950.6	chr10	+	2297	11	Antisense	novelGene_ENSMUSG00000019814.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2755	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGCTAGGCTGTAGCCG	NA	False	NA	NA	False	NA	NA	NA	13053883	13068912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr10_+_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
ENSMUST00000019951.16	chr10	-	2177	11	FSM	ENSMUSG00000019813.17	ENSMUST00000019951.16	2177	11	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_4	38.3583107031579	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	390	False	NA	-1	True	AATAAA	-20	NA	41685603	41594841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
ENSMUST00000019962.15	chr10	+	2922	6	FSM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	0	0	0	0	multi-exon	FALSE	canonical	3	1648	junction_4	8.82269800004511	2787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATATTTTGATTATGA	NA	False	NA	20	True	AATAAA	-25	NA	41395409	41407044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ENSMUST00000019965.13	chr10	-	1602	10	FSM	ENSMUSG00000019822.13	ENSMUST00000019965.13	1602	10	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_9	17.8020667408847	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTACCTTGTTCCTT	NA	False	NA	0	True	AATAAA	-20	NA	41366336	41363167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364428_41364512_41364729_41364820_41364926_41365021_41365270_41365348_41365459_41365557_41365978
ENSMUST00000019967.16	chr10	+	3563	24	FSM	ENSMUSG00000019823.18	ENSMUST00000019967.16	3563	24	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	27.5095446574272	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9093	False	NA	29	True	AATAAA	-18	NA	41352309	41363026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ENSMUST00000019975.14	chr10	+	2609	9	FSM	ENSMUSG00000019831.15	ENSMUST00000019975.14	2609	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	81.4024531264261	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTGTCGCTCTTCGAG	NA	False	NA	17	True	AATAAA	-19	NA	40759470	40814565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_40759606_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813641
ENSMUST00000019998.9	chr10	+	1952	3	FSM	ENSMUSG00000019851.9	ENSMUST00000019998.9	1952	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	1	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTCTGCTTTGTAGT	NA	False	NA	12	True	AATAAA	-14	NA	18720767	18732821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_18721155_18729284_18729426_18731397
ENSMUST00000020002.9	chr10	-	846	3	FSM	ENSMUSG00000078453.4	ENSMUST00000020002.9	846	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	12	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGGTGGCTGTGTTTT	NA	False	NA	-4	True	AATAAA	-22	NA	17899036	17887007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_17887565_17894586_17894654_17898814
ENSMUST00000020012.7	chr10	-	1981	11	FSM	ENSMUSG00000019863.8	ENSMUST00000020012.7	1981	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	11.040380428228	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGGATTTTACTATAAT	NA	False	NA	NA	False	TATAAA	-6	NA	43777741	43750183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_43750703_43752467_43752674_43757468_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
ENSMUST00000020027.11	chr10	-	2880	9	FSM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_6	44.2279252848243	533	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTGGTAGCATTACA	NA	False	NA	NA	False	AATAAA	-16	NA	57408626	57391869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400195_57400415_57400496_57401420_57401591_57403760_57403923_57408452
ENSMUST00000020078.14	chr10	+	4327	10	FSM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_4	23.8875968642854	298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTTACATATCATTTAG	NA	False	NA	10	True	AATAAA	-19	NA	58159287	58260513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ENSMUST00000020081.11	chr10	+	1834	8	FSM	ENSMUSG00000019923.15	ENSMUST00000020081.11	1834	8	0	0	0	0	multi-exon	FALSE	canonical	3	928	junction_7	94.1772102940808	2286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTCCTTGTTGCATT	NA	False	NA	10	True	AATAAA	-23	NA	72490676	72510796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797
ENSMUST00000020109.5	chr10	-	1705	11	FSM	ENSMUSG00000019948.5	ENSMUST00000020109.5	1705	11	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_5	22.702422778197	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATCTGTTTAATGTTTA	NA	False	NA	-18	True	AATAAA	-21	NA	89568157	89547832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89568035
ENSMUST00000020113.15	chr10	+	2862	12	FSM	ENSMUSG00000019952.16	ENSMUST00000020113.15	2862	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_11	10.2158522093674	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAAATGAAATGTA	NA	False	NA	NA	False	NA	NA	NA	98942897	99033850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ENSMUST00000020118.5	chr10	+	2796	3	FSM	ENSMUSG00000019960.9	ENSMUST00000020118.5	2796	3	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTGTTTTTATTTTTAAG	NA	False	NA	9	True	AATAAA	-19	NA	99099092	99103350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_99099954_99100405_99100844_99101853
ENSMUST00000020145.12	chr10	+	2456	12	FSM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_1	88.4218850289119	4003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	False	NA	18	True	AATAAA	-24	NA	21870564	21875802	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ENSMUST00000020153.10	chr10	+	2793	18	FSM	ENSMUSG00000019977.17	ENSMUST00000020153.10	2793	18	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	231.196571495514	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171877	21244797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212874_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ENSMUST00000020171.12	chr10	+	2398	5	FSM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	4.81534007106456	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGGCTTGGCTGTTCAT	NA	False	NA	5	True	AATAAA	-21	NA	24471339	24474576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_24471687_24471773_24471997_24472244_24472497_24472629_24472842_24473212
ENSMUST00000020203.7	chr10	-	861	4	FSM	ENSMUSG00000020018.7	ENSMUST00000020203.7	861	4	0	0	0	0	multi-exon	FALSE	canonical	3	2132	junction_3	195.841772867792	15097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGTTCACTTGAAAG	NA	False	NA	NA	False	GATAAA	-36	NA	93425568	93418890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_93419393_93419891_93419957_93423859_93423986_93425400
ENSMUST00000020209.16	chr10	+	1110	4	FSM	ENSMUSG00000020022.18	ENSMUST00000020209.16	1110	4	0	0	0	0	multi-exon	FALSE	canonical	3	3293	junction_3	309.018877524767	13683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCAAGATGTTCTATTT	NA	False	NA	11	True	NA	NA	NA	94034816	94057305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_94034993_94035811_94035895_94039149_94039238_94056542
ENSMUST00000020215.16	chr10	-	2222	3	FSM	ENSMUSG00000020027.19	ENSMUST00000020215.16	2222	3	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_2	23.5	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGAGTTGTAGGTGTA	NA	False	NA	2	True	AATAAA	-32	NA	95252719	95247351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_95248973_95250692_95251054_95252479
ENSMUST00000020238.14	chr10	-	2825	18	FSM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	0	0	0	0	multi-exon	FALSE	canonical	3	2860	junction_11	342.987041630793	6133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	-40	True	AATAAA	-16	NA	86541373	86526703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ENSMUST00000020248.16	chr10	+	1052	7	FSM	ENSMUSG00000020056.17	ENSMUST00000020248.16	1052	7	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_4	34.2377309736236	2444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAATGTGTCTTAAGTT	NA	False	NA	NA	False	AATATA	-17	NA	88036954	88082020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88070255_88070321_88081617
ENSMUST00000020252.10	chr10	+	1139	9	FSM	ENSMUSG00000020059.10	ENSMUST00000020252.10	1139	9	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	7.47391296443837	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGGTTTCAGTATAT	NA	False	NA	3	True	AATAAA	-15	NA	88295430	88309097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537_88308643_88308766
ENSMUST00000020258.10	chr10	+	3898	25	FSM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_7	41.1321548993809	632	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACCAGTAGTTTCTATG	NA	False	NA	13	True	AATAAA	-27	NA	63079689	63153653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ENSMUST00000020263.14	chr10	-	2213	10	FSM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_6	80.8621750760186	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGTCCTAGAATAT	5781	False	NA	-15	True	AATAAA	-15	NA	62859673	62850442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859498
ENSMUST00000020268.7	chr10	-	4352	25	FSM	ENSMUSG00000020074.8	ENSMUST00000020268.7	4352	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	99.9008883844383	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTAGTTCCTTCAGAA	NA	False	NA	0	True	ATTAAA	-18	NA	62628010	62579706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627983
ENSMUST00000020270.6	chr10	-	2535	15	FSM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_9	23.4748019486984	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGAGTTTTCT	8106	False	NA	-11	True	ATTAAA	-28	NA	62486997	62451793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
ENSMUST00000020273.16	chr10	-	2604	15	FSM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	0	0	0	0	multi-exon	FALSE	canonical	2	205	junction_12	41.8359283147773	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTTGTAATTGCCTT	NA	False	NA	95	True	AATAGA	-18	NA	62285517	62264987	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ENSMUST00000020283.5	chr10	-	2175	9	FSM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_7	26.0813031691286	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGCGTCTTTCTTATA	NA	False	NA	-26	True	NA	NA	NA	61619926	61574443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
ENSMUST00000020285.10	chr10	+	2613	7	FSM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	0	0	0	0	multi-exon	FALSE	canonical	3	1130	junction_5	94.5492229241233	2638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	61516088	61529076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ENSMUST00000020286.7	chr10	+	1364	11	FSM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	0	0	0	0	multi-exon	FALSE	canonical	3	3777	junction_3	128.102654148929	8803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2052	False	NA	15	True	AATAAA	-16	NA	61484330	61509947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ENSMUST00000020289.10	chr10	-	4282	20	FSM	ENSMUSG00000020092.10	ENSMUST00000020289.10	4282	20	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_14	26.6759563689748	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGCTGATTGGTCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	61219309	61155434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ENSMUST00000020298.8	chr10	+	789	4	FSM	ENSMUSG00000020098.8	ENSMUST00000020298.8	789	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	1.24721912892465	608	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGCTTCTAGAACCTTC	NA	False	NA	6	True	AATAAA	-17	NA	60925137	60930103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_60925196_60927842_60927975_60928382_60928464_60929585
ENSMUST00000020307.11	chr10	-	1379	5	FSM	ENSMUSG00000020107.11	ENSMUST00000020307.11	1379	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	152.559004978402	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	59838933	59823729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838239_59838290_59838777
ENSMUST00000020308.5	chr10	-	1755	3	FSM	ENSMUSG00000020108.5	ENSMUST00000020308.5	1755	3	0	0	0	0	multi-exon	FALSE	canonical	3	721	junction_1	4.5	777	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTCTCATCGGCGCCA	NA	False	NA	-4	True	AATAAA	-17	NA	59787656	59785490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_59786852_59787138_59787395_59787518
ENSMUST00000020309.7	chr10	+	2238	9	FSM	ENSMUSG00000020109.14	ENSMUST00000020309.7	2238	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	81.8458917722814	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGCGCACCAAGGACTC	NA	False	NA	NA	False	NA	NA	NA	59715447	59734343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732318_59733312
ENSMUST00000020311.13	chr10	+	2336	14	FSM	ENSMUSG00000020111.16	ENSMUST00000020311.13	2336	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	77.7733773527424	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGCTCTGTGTCCTTTCT	NA	False	NA	25	True	NA	NA	NA	59538420	59699952	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59592527_59592540_59602905_59602912_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59697384_59697475_59699000
ENSMUST00000020316.4	chr10	-	3024	21	FSM	ENSMUSG00000020115.4	ENSMUST00000020316.4	3024	21	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_12	17.7	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTGTGCTTTTGTACC	3878	False	NA	0	True	AATAAA	-22	NA	121422692	121382359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
ENSMUST00000020317.8	chr11	-	1544	7	FSM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	0	0	0	0	multi-exon	FALSE	canonical	3	1392	junction_5	81.0276016072438	2965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCAGTCTCTTTTTCTAA	NA	False	NA	48	True	AGTAAA	-19	NA	17161568	17153197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
ENSMUST00000020334.9	chr10	-	4666	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_15	80.7788802843912	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGTCTTTTATTTCTTA	NA	False	NA	-1	True	AATAAA	-16	NA	123032858	122947640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ENSMUST00000020341.9	chr10	-	1649	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	0	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGGCTCGCTTTATTA	8717	False	NA	NA	False	GATAAA	-19	NA	80156371	80154087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80155382_80156016
ENSMUST00000020358.12	chr11	+	2827	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	0	0	0	0	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	3457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCGCTTGTTGGGTCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	20151431	20176856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ENSMUST00000020361.7	chr10	+	758	8	FSM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	0	0	0	0	multi-exon	FALSE	canonical	3	1255	junction_1	343.259525783067	8221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGTTCTGTGTGGA	9692	False	NA	23	True	AATAAA	-14	NA	80085285	80092626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUST00000020365.15	chr10	+	2640	14	FSM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	105.419758317817	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATAGTCATTGCACA	8218	False	NA	19	True	TATAAA	-17	NA	80062267	80079737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ENSMUST00000020372.6	chr10	-	445	3	FSM	ENSMUSG00000020163.13	ENSMUST00000020372.6	445	3	0	0	0	0	multi-exon	FALSE	canonical	3	4161	junction_1	104.5	18317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTCCTTCCTCATC	NA	False	NA	-1	True	ATTAAA	-21	NA	80242664	80238830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80238990_80239969_80240121_80242529
ENSMUST00000020382.8	chr10	-	1327	7	FSM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_4	39.2074256005444	1064	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGTCTGCCTCTTGTG	3371	False	NA	-14	True	AATAAA	-14	NA	117060412	117051126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
ENSMUST00000020408.16	chr10	-	3099	12	FSM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_11	63.7658423031336	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTCAGTGATTTTG	NA	False	NA	1	True	AATAAA	-41	NA	117546663	117524779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
ENSMUST00000020439.11	chr10	+	2294	10	FSM	ENSMUSG00000020218.12	ENSMUST00000020439.11	2294	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	5.2704627669473	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGGTCTTTGTAAGACT	NA	False	NA	NA	False	AATAAA	-27	NA	120869864	120936555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_120870396_120870870_120871011_120911150_120911260_120918030_120918172_120919792_120919889_120920813_120920910_120926015_120926112_120931903_120932000_120932545_120932642_120935662
ENSMUST00000020446.11	chr10	+	904	7	FSM	ENSMUSG00000020225.11	ENSMUST00000020446.11	904	7	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_6	43.3628104870214	1789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTCTTCTATAATT	NA	False	NA	31	True	ATTAAA	-43	NA	120044654	120060822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_120044848_120051445_120051555_120053408_120053515_120056655_120056690_120057910_120058029_120059741_120059788_120060524
ENSMUST00000020452.12	chr10	-	2016	11	FSM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	2.63818119165458	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCATTTTGTTCTGTTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	76073671	76043060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121_76061305_76062023_76062150_76072545_76072656_76073583
ENSMUST00000020463.14	chr10	-	3118	14	FSM	ENSMUSG00000020238.15	ENSMUST00000020463.14	3118	14	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_4	53.9264236863306	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACCAGAACCCTGCTCC	NA	False	NA	NA	False	ATTAAA	-18	NA	81332226	81322082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ENSMUST00000020484.9	chr10	+	3325	14	FSM	ENSMUSG00000020250.12	ENSMUST00000020484.9	3325	14	0	0	0	0	multi-exon	FALSE	canonical	1	113	junction_1	208.745903123884	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695012	82733546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_82695135_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ENSMUST00000020493.9	chr10	+	2290	9	FSM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	28.5938695352693	871	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAGTCCTAGAAATGGT	NA	False	NA	16	True	AATAAA	-17	NA	77095051	77105409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_77095288_77096407_77096659_77098270_77098416_77099098_77099210_77100789_77100857_77101669_77101796_77102746_77102928_77103017_77103142_77104360
ENSMUST00000020500.14	chr10	-	3020	21	FSM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	12.9324205004322	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484602	83435896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ENSMUST00000020504.6	chr11	+	636	3	FSM	ENSMUSG00000020267.7	ENSMUST00000020504.6	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	4351	junction_2	227.5	30631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTGTTACTCTGGAA	NA	False	NA	34	True	AATAAA	-23	NA	54757208	54761327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_54757427_54760673_54760779_54761014
ENSMUST00000020528.14	chr11	+	1737	4	FSM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	11.8977121983832	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGCACGCGTGTGT	NA	False	NA	6	True	NA	NA	NA	32176510	32182700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_32176718_32177751_32177950_32179848_32180054_32181573
ENSMUST00000020552.8	chr10	+	1143	2	FSM	ENSMUSG00000020308.8	ENSMUST00000020552.8	1143	2	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTGCTGGTCACCTG	7965	False	NA	11	True	AATAAA	-13	NA	79505202	79511961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79505618_79511233
ENSMUST00000020553.5	chr11	-	1018	2	FSM	ENSMUSG00000020309.7	ENSMUST00000020553.5	1018	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTGTACTTTTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	30936334	30926951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_30927747_30936111
ENSMUST00000020554.8	chr10	+	1436	5	FSM	ENSMUSG00000020310.10	ENSMUST00000020554.8	1436	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	3.08220700148449	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGGCATATTCTTTCG	3155	False	NA	NA	False	AATAAA	-14	NA	79500392	79504371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79500502_79500745_79501013_79501264_79501592_79502172_79502605_79504070
ENSMUST00000020562.5	chr11	+	1634	13	FSM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_2	1486.11417938416	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGATAAAAGGATGGTTG	NA	False	NA	NA	False	NA	NA	NA	22940649	22953151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_22940881_22943266_22943320_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ENSMUST00000020576.8	chr11	-	3512	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	40646138	40639378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ENSMUST00000020578.11	chr11	+	1577	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_2	37.9326889224701	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	29	True	AATAAA	-21	NA	40624493	40630873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
ENSMUST00000020580.13	chr10	-	3755	21	FSM	ENSMUSG00000020329.13	ENSMUST00000020580.13	3755	21	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_16	17.3118456555042	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAGACGCTGCGCTCGG	4709	False	NA	-7	True	NA	NA	NA	79582413	79571963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ENSMUST00000020637.9	chr11	-	3779	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	0	0	0	0	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	3959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8136	False	NA	-54	True	AATAAA	-22	NA	50216500	50185293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ENSMUST00000020640.8	chr11	+	1447	8	FSM	ENSMUSG00000020372.16	ENSMUST00000020640.8	1447	8	0	0	0	0	multi-exon	FALSE	canonical	1	1907	junction_2	1651.73542626153	106802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCCACCTTTCCCCAAG	NA	False	NA	NA	False	AATAAA	-23	NA	48691186	48697261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUST00000020647.10	chr11	+	1142	7	FSM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	8.63616427202108	650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCTTGCTGCTACACTC	NA	False	NA	7	True	AATAAA	-17	NA	50065675	50090942	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_50065779_50067653_50067714_50073318_50073408_50085034_50085111_50087770_50087920_50088445_50088531_50090362
ENSMUST00000020653.6	chr11	+	1201	7	FSM	ENSMUSG00000020386.6	ENSMUST00000020653.6	1201	7	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_5	46.9006041183551	2691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGTTGGGCAGCTGT	3565	False	NA	12	True	AATAAA	-18	NA	51654513	51682752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
ENSMUST00000020657.13	chr11	-	1792	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	2332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCAGCCTCCTAGAGA	NA	False	NA	58	True	NA	NA	NA	51891311	51876323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
ENSMUST00000020665.13	chr11	+	1193	3	FSM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	179.5	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAATTGTCATTCTTGGA	NA	False	NA	12	True	AATAAA	-14	NA	46327778	46332354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_46327837_46330632_46330803_46331389
ENSMUST00000020677.8	chr11	+	1277	9	FSM	ENSMUSG00000020407.14	ENSMUST00000020677.8	1277	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	932.389931506663	3959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9068102	9086164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_9068285_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ENSMUST00000020683.10	chr11	-	4640	8	FSM	ENSMUSG00000020413.12	ENSMUST00000020683.10	4640	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_5	37.6557988054094	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATTCATTTATTAAT	NA	False	NA	92	True	AATAAA	-21	NA	8961191	8943136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240_8960418_8960496_8960625_8961058
ENSMUST00000020687.15	chr11	-	741	6	FSM	ENSMUSG00000020415.17	ENSMUST00000020687.15	741	6	0	0	0	0	multi-exon	FALSE	canonical	3	2427	junction_5	2882.94754721622	16210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAACCCCTGATTGGTAT	NA	False	NA	-12	True	AATAAA	-34	NA	43317078	43311076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317027
ENSMUST00000020689.10	chr11	-	1915	12	FSM	ENSMUSG00000020419.12	ENSMUST00000020689.10	1915	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	65.3129782200057	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTTGATAATTTATGT	NA	False	NA	-20	True	AATAAA	-11	NA	4391103	4295813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4371610_4374270_4374308_4374755_4374820_4375505_4375627_4377243_4377386_4385001_4385090_4391015
ENSMUST00000020699.4	chr11	+	1574	9	FSM	ENSMUSG00000020424.4	ENSMUST00000020699.4	1574	9	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	11.4229757506527	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGACAGCTGGCG	7118	False	NA	17	True	AATAAA	-25	NA	4168224	4172409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_4168427_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842
ENSMUST00000020705.5	chr11	+	2911	15	FSM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_12	97.3847042006336	2795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGCTGCCCATTATTG	NA	False	NA	NA	False	NA	NA	NA	3913974	3930004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUST00000020710.11	chr11	-	1897	10	FSM	ENSMUSG00000020432.13	ENSMUST00000020710.11	1897	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	45.2714719535328	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3881995	3867191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881585_3881975
ENSMUST00000020717.12	chr6	+	1116	6	FSM	ENSMUSG00000020440.14	ENSMUST00000020717.12	1116	6	0	0	0	0	multi-exon	TRUE	canonical	3	1725	junction_4	143.712769091685	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGTGTTGTCTGTTGCCT	-31	True	NA	17	True	AATAAA	-17	NA	28423558	28426601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_28423755_28424288_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
ENSMUST00000020719.7	chr11	+	1285	7	FSM	ENSMUSG00000020441.7	ENSMUST00000020719.7	1285	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	17.464249196573	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTATATTATCTCGCT	NA	False	NA	7	True	AGTAAA	-15	NA	59099146	59101564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_59099500_59099645_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101052
ENSMUST00000020734.11	chr11	+	3565	18	FSM	ENSMUSG00000020454.18	ENSMUST00000020734.11	3565	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	69.1571601699214	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGATATGGCTGGTACTGT	3573	False	NA	7	True	ATTAAA	-23	NA	3152391	3194581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_3152557_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ENSMUST00000020741.12	chr11	-	1546	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	0	0	0	0	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	4797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGAGGTTTGCTGTG	NA	False	NA	-1	True	TATAAA	-34	NA	3216393	3199906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ENSMUST00000020756.9	chr11	-	2707	28	Antisense	novelGene_ENSMUSG00000020464.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	998	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGAAGGCCTGGGCAGC	NA	False	NA	NA	False	NA	NA	NA	29111828	29080747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr11_-_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ENSMUST00000020768.4	chr11	-	840	3	FSM	ENSMUSG00000020475.4	ENSMUST00000020768.4	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	6	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCACGTTTCATATAGCT	8648	False	NA	NA	False	AATAAA	-15	NA	5753733	5751639	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_5751840_5752998_5753180_5753274
ENSMUST00000020769.14	chr11	+	1638	13	FSM	ENSMUSG00000020476.15	ENSMUST00000020769.14	1638	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	109.921057531707	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACAGCAGCACTGAGACG	NA	False	NA	NA	False	NA	NA	NA	5738521	5750288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747274_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ENSMUST00000020794.6	chr11	+	3037	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTCCATGTTATATT	NA	False	NA	13	True	AATAAA	-21	NA	87000059	87015461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
ENSMUST00000020801.14	chr11	-	3218	4	FSM	ENSMUSG00000020495.14	ENSMUST00000020801.14	3218	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	5.65685424949238	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTATCTGTTTTGTC	NA	False	NA	1	True	AATAAA	-35	NA	86977600	86968557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_86968977_86970991_86971865_86974425_86974572_86975820
ENSMUST00000020804.8	chr11	-	2336	10	FSM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	8.73053390247253	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGATTCCAGTGTGT	NA	False	NA	-8	True	AATAAA	-39	NA	86964888	86924692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_86926122_86926417_86926470_86928656_86928717_86932613_86932748_86935952_86936043_86936581_86936701_86947617_86947664_86950250_86950387_86954724_86954768_86964661
ENSMUST00000020820.2	chr11	+	722	7	FSM	ENSMUSG00000020514.9	ENSMUST00000020820.2	722	7	0	0	0	0	multi-exon	TRUE	canonical	3	1080	junction_1	114.661821603066	5313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTTTCATTGAATTATT	1481	False	NA	12	True	AGTAAA	-15	NA	58062486	58070391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_58062540_58062619_58062669_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
ENSMUST00000020822.12	chr11	-	2035	7	Antisense	novelGene_ENSMUSG00000020515.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCTTGCCCCGGATCC	1212	False	NA	NA	False	NA	NA	NA	58009420	57994978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr11_-_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ENSMUST00000020824.15	chr11	-	2771	15	FSM	ENSMUSG00000020516.16	ENSMUST00000020824.15	2771	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	88.8732472774156	420	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCTGTGGCTTGTCTG	NA	False	NA	-4	True	AATAAA	-21	NA	86435631	86392858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86407569_86407814_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ENSMUST00000020830.14	chr11	+	4839	3	FSM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	12.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTGAATGATGTATATT	NA	False	NA	18	True	AATAAA	-19	NA	57409512	57424640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_57409575_57418684_57419116_57420294
ENSMUST00000020831.13	chr11	-	2557	14	FSM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_13	118.75144346678	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCGTGGTATTTAATAGC	NA	False	NA	NA	False	AATAAA	-21	NA	57409443	57373818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57409398
ENSMUST00000020856.6	chr12	-	1871	12	FSM	ENSMUSG00000020547.6	ENSMUST00000020856.6	1871	12	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_9	81.950499068161	3734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATGGTCAGAGCGTGT	NA	False	NA	-11	True	AATAAA	-21	NA	36206824	36141833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
ENSMUST00000020885.13	chr12	+	2019	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	1828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGAATGCCCCGTT	8425	False	NA	NA	False	AATAAA	-7	NA	33004182	33026903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ENSMUST00000020886.9	chr12	+	4527	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGTTAGTGAAATGTTA	NA	False	NA	-7	True	AATAAA	-18	NA	32870333	32903348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ENSMUST00000020896.17	chr12	-	1932	6	FSM	ENSMUSG00000020577.18	ENSMUST00000020896.17	1932	6	0	0	0	0	multi-exon	FALSE	canonical	3	804	junction_3	64.3913037606787	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGGGTGTTTAAATCAA	NA	False	NA	-4	True	AATAAA	-20	NA	36092488	36064555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_36065772_36070488_36070603_36071799_36071914_36072751_36072833_36073903_36074072_36092249
ENSMUST00000020909.4	chr12	+	1773	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	0	0	0	0	multi-exon	FALSE	canonical	3	924	junction_4	59.5158708991886	4474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTCATGTTTATGCTA	NA	False	NA	38	True	AATAAA	-29	NA	8971663	8988742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ENSMUST00000020911.14	chr12	+	3157	5	FSM	ENSMUSG00000020592.15	ENSMUST00000020911.14	3157	5	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_4	19.0574788468989	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTGTACTTGTGCAG	NA	False	NA	NA	False	AATAAA	-28	NA	8821322	8843715	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_8821702_8839406_8839489_8840384_8840867_8841290_8841427_8841637
ENSMUST00000020927.10	chr12	-	2959	7	Genic_Genomic	ENSMUSG00000111889.2	novel	773	2	NA	NA	-7107	22028	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1019	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGTCCTGGGCGTCGCTGC	NA	False	NA	NA	False	NA	NA	NA	8393824	8363431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr12_-_8363498_8367784_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ENSMUST00000020947.7	chr12	+	1480	2	FSM	ENSMUSG00000020621.7	ENSMUST00000020947.7	1480	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTGCATTTCTTTAA	NA	False	NA	11	True	AATAAA	-17	NA	10440771	10445562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_10441227_10444537
ENSMUST00000020949.12	chr11	+	2068	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	8.31308835611224	465	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGCATAGTATTAGTG	NA	False	NA	14	True	AGTAAA	-24	NA	110289947	110404467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
ENSMUST00000020957.13	chr12	+	1652	4	FSM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	13.6950923894494	2312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCTCTCGAGAGTTCT	NA	False	NA	15	True	NA	NA	NA	28725229	28732174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_28725372_28727776_28727897_28729388_28729569_28730964
ENSMUST00000020959.9	chr12	+	1455	8	FSM	ENSMUSG00000020630.10	ENSMUST00000020959.9	1455	8	0	0	0	0	multi-exon	TRUE	canonical	3	155	junction_3	35.1318217284442	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACATCTAGTTTGAGTTA	NA	False	NA	13	True	AATAAA	-21	NA	28699600	28709588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
ENSMUST00000020964.7	chr12	-	976	4	FSM	ENSMUSG00000020635.9	ENSMUST00000020964.7	976	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	6.34209919681348	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTTGTGGGAGGTTCTT	NA	False	NA	0	True	AATAAA	-29	NA	4891591	4883173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_4883796_4884738_4884852_4888168_4888217_4891398
ENSMUST00000020974.7	chr12	-	1270	3	FSM	ENSMUSG00000020644.10	ENSMUST00000020974.7	1270	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCGGGATTCTGAATGG	NA	False	NA	NA	False	AATAAA	-15	NA	25146091	25143799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_25144576_25145309_25145374_25145661
ENSMUST00000020977.4	chr12	-	1773	7	FSM	ENSMUSG00000020648.4	ENSMUST00000020977.4	1773	7	0	0	0	0	multi-exon	FALSE	canonical	2	86	junction_6	14.7016627933336	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGTATGACTCGCCTGTA	9060	False	NA	-5	True	AATAAA	-17	NA	31704825	31690048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_31690944_31691500_31691728_31692762_31692886_31696619_31696738_31698764_31698887_31702289_31702441_31704688
ENSMUST00000020980.12	chr12	+	2193	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	0	0	0	0	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	13431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTTGGGTAAAATGTAC	NA	False	NA	72	True	ATTAAA	-26	NA	24758239	24764145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ENSMUST00000021001.10	chr12	-	3513	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	0	0	0	0	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGGTTTGGTTTTCAT	NA	False	NA	-2	True	TATAAA	-19	NA	3359969	3297427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ENSMUST00000021018.11	chr11	+	2068	16	FSM	ENSMUSG00000020680.16	ENSMUST00000021018.11	2068	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	25.2651714597168	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAGTGCATTATTTGTC	8660	False	NA	41	True	AATAAA	-21	NA	83363917	83397569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750_83379872_83388087_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395931_83397243
ENSMUST00000021039.12	chr11	+	5957	20	FSM	ENSMUSG00000020697.17	ENSMUST00000021039.12	5957	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	44.1937311456747	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTTCCCCCCCAA	NA	False	NA	11	True	AATAAA	-16	NA	82671960	82695100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678659_82679581_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ENSMUST00000021049.9	chr11	-	1316	11	Antisense	novelGene_ENSMUSG00000065162.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8941	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTATCGCGCAGGCGCGG	7628	False	NA	NA	False	NA	NA	NA	106153946	106146979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr11_-_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
ENSMUST00000021060.6	chr11	-	1506	8	FSM	ENSMUSG00000020718.13	ENSMUST00000021060.6	1506	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	14.9652659072089	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTGGACTTTTGTA	4319	False	NA	NA	False	AATAAA	-33	NA	106670341	106659078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669784
ENSMUST00000021062.12	chr11	-	3559	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	0	0	0	0	multi-exon	FALSE	canonical	3	3830	junction_8	158.443711526277	8529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	9616	False	NA	-8	True	AATAAA	-18	NA	106679358	106671180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ENSMUST00000021063.13	chr11	+	1904	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	0	0	0	0	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	5894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGCGTGGAGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	107370309	107388999	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ENSMUST00000021077.4	chr11	+	1925	6	FSM	ENSMUSG00000020733.4	ENSMUST00000021077.4	1925	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	12.6964561984831	429	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCTGTGTCCTCCTTT	NA	False	NA	10	True	NA	NA	NA	115054166	115072007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_115054778_115067176_115067339_115068049_115068204_115069875_115069917_115070832_115070923_115071140
ENSMUST00000021078.3	chr11	-	1948	12	FSM	ENSMUSG00000018861.9	ENSMUST00000021078.3	1948	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_7	15.1766458254911	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGCTGATAGCTACCA	NA	False	NA	0	True	AATAAA	-17	NA	115167876	115158849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167634
ENSMUST00000021082.7	chr11	-	858	5	FSM	ENSMUSG00000020736.13	ENSMUST00000021082.7	858	5	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_4	11.1214882097676	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGATCTTTGATGCT	NA	False	NA	-8	True	AATAAA	-19	NA	115382688	115381245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115381571_115381678_115381794_115381963_115382025_115382096_115382198_115382432
ENSMUST00000021083.7	chr11	-	1375	5	FSM	ENSMUSG00000020737.13	ENSMUST00000021083.7	1375	5	0	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_2	125.475844288851	7083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGTGTTTTGTCTTTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	115405213	115388178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115389126_115391491_115391511_115392830_115392929_115393857_115394001_115405045
ENSMUST00000021084.10	chr11	-	1000	4	FSM	ENSMUSG00000020738.17	ENSMUST00000021084.10	1000	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1872.39424860851	35517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTCTTTATTCTGAA	NA	False	NA	-51	True	AATAAA	-18	NA	115427055	115413927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115414596_115421171_115421244_115425381_115425510_115426923
ENSMUST00000021085.11	chr11	+	2230	19	FSM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	0	0	0	0	multi-exon	TRUE	canonical	3	862	junction_16	81.0315439264927	1794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGATGGATGTTTCCAC	NA	False	NA	91	True	AATGAA	-12	NA	115455259	115474811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ENSMUST00000021087.14	chr11	-	1372	6	FSM	ENSMUSG00000020743.16	ENSMUST00000021087.14	1372	6	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_2	38.1030182531515	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503795	115498743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503610
ENSMUST00000021089.11	chr11	-	2307	7	FSM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_6	21.3053201493586	593	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGACTGCAGACCATT	NA	False	NA	-13	True	AATAAA	-17	NA	115518971	115505003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518890
ENSMUST00000021097.10	chr11	-	3971	19	FSM	ENSMUSG00000020752.12	ENSMUST00000021097.10	3971	19	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_14	12.1025708930881	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTTGGGTGTTTTAC	NA	False	NA	-2	True	AATAAA	-33	NA	115824303	115783420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ENSMUST00000021114.5	chr11	-	1406	8	FSM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_4	62.9907670591006	971	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTTCCTACTGCAGG	NA	False	NA	9	True	NA	NA	NA	115903545	115899282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
ENSMUST00000021119.9	chr11	-	1530	6	FSM	ENSMUSG00000020774.10	ENSMUST00000021119.9	1530	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	4.1182520563948	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTGATGACTGTGATA	NA	False	NA	NA	False	ATTAAA	-16	NA	73215460	73195817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_73196460_73199534_73199645_73204335_73204444_73210620_73210715_73212911_73213108_73215080
ENSMUST00000021130.7	chr11	+	902	4	FSM	ENSMUSG00000020778.13	ENSMUST00000021130.7	902	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	16.0277537068951	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTGCTGATGCGG	9067	False	NA	7	True	AATAAA	-14	NA	116089680	116106144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116089810_116095670_116095806_116096436_116096595_116105664
ENSMUST00000021133.16	chr11	-	2526	16	FSM	ENSMUSG00000020780.16	ENSMUST00000021133.16	2526	16	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_9	48.1105209099031	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCTGGTTTTTGCA	9817	False	NA	-2	True	ATTAAA	-17	NA	116165043	116135991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ENSMUST00000021158.4	chr11	+	981	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	0	0	0	0	multi-exon	FALSE	canonical	3	1302	junction_3	85.4959388249264	11559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAACTCAGGCAGTTTTC	NA	False	NA	NA	False	ATTAAA	-29	NA	72098372	72100841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
ENSMUST00000021161.14	chr11	-	3329	12	FSM	ENSMUSG00000020805.15	ENSMUST00000021161.14	3329	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	6.58196885814471	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGCCTGGCCTTCCTGG	NA	False	NA	0	True	AATAAA	-23	NA	72157485	72132814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848_72152978_72157289
ENSMUST00000021164.4	chr11	+	1513	6	FSM	ENSMUSG00000020808.4	ENSMUST00000021164.4	1513	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	92.1316449435263	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTTTTTAGATATCT	NA	False	NA	14	True	AATAAA	-18	NA	71933280	71938196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_71933361_71933842_71934164_71935806_71936085_71936504_71936601_71937165_71937220_71937512
ENSMUST00000021177.15	chr11	+	2866	17	FSM	ENSMUSG00000020823.17	ENSMUST00000021177.15	2866	17	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_16	82.8488599423673	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGAGTGTCCTTTTCTTCT	NA	False	NA	5	True	AATAAA	-15	NA	117005997	117050091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117049579
ENSMUST00000021181.13	chr11	-	779	5	FSM	ENSMUSG00000020831.19	ENSMUST00000021181.13	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	106.829303096107	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	-12	True	ATTAAA	-15	NA	70128740	70126031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70126295_70126849_70127038_70127702_70127805_70128356_70128452_70128609
ENSMUST00000021183.4	chr11	-	2014	10	FSM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_8	16.2890556304942	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATCTTTTATTTCTTT	NA	False	NA	-2	True	AATAAA	-22	NA	77971209	77964201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
ENSMUST00000021197.10	chr11	+	2497	12	FSM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_4	56.5853410915431	2543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGCCGGCGTGTCTGGTC	NA	False	NA	30	True	AATAAA	-19	NA	76836329	76878205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ENSMUST00000021226.14	chr11	-	3373	11	FSM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	62.20843994186	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGATTGTCTGTGTCAT	NA	False	NA	-5	True	AATAAA	-23	NA	94212814	94181964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ENSMUST00000021239.7	chr11	+	2837	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	0	0	0	0	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	27	True	ATTAAA	-18	NA	94520592	94536042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
ENSMUST00000021243.16	chr11	+	1523	9	FSM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	19.5923294939627	1806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGACCCTGCTGCTGC	NA	False	NA	21	True	AATAAA	-22	NA	95275517	95282602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_95275940_95276626_95276731_95277311_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ENSMUST00000021249.11	chr11	+	1530	8	FSM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	16.9597362320652	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGATCTCAAGTCTATT	NA	False	NA	17	True	AATAAA	-23	NA	96920763	96924784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_96920882_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
ENSMUST00000021277.6	chr11	+	1950	8	FSM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_1	36.6756327936728	1803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGTGGTCTGAATAT	NA	False	NA	16	True	AATAAA	-26	NA	68936477	68942490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ENSMUST00000021278.14	chr11	+	4164	23	FSM	ENSMUSG00000020898.19	ENSMUST00000021278.14	4164	23	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_14	54.4241833704208	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTCATCTCTGAGGT	5086	False	NA	21	True	AATAAA	-21	NA	68906736	68927299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ENSMUST00000021286.11	chr11	+	1638	5	FSM	ENSMUSG00000020903.14	ENSMUST00000021286.11	1638	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	126.986957991756	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCTGGAGTGTTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	67857294	67878433	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67877150
ENSMUST00000021296.7	chr11	-	1574	4	FSM	ENSMUSG00000020921.7	ENSMUST00000021296.7	1574	4	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_3	22.1710521977545	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTTGCTTCTGTCT	4465	False	NA	0	True	AATAAA	-16	NA	102047230	102043371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102044421_102045382_102045530_102046549_102046731_102047033
ENSMUST00000021297.6	chr11	-	2256	5	FSM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	0	0	0	0	multi-exon	FALSE	canonical	3	919	junction_1	21.856063231973	3231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTCAGGTTTGTGC	6356	False	NA	-1	True	AATAAA	-23	NA	102076122	102053322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
ENSMUST00000021306.14	chr11	-	3324	28	FSM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_26	264.162864923118	1759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTTTGCTGCTTTC	8466	False	NA	-5	True	TATAAA	-22	NA	102771793	102729298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ENSMUST00000021313.9	chr11	-	1744	5	FSM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	0	0	0	0	multi-exon	FALSE	canonical	3	1121	junction_2	32.0965340808007	3930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAATTCCACTTGGCCT	8193	False	NA	-5	True	NA	NA	NA	102907994	102884872	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891183_102907875
ENSMUST00000021314.8	chr11	+	4861	12	FSM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	0	0	0	0	multi-exon	TRUE	canonical	3	928	junction_6	43.300411312535	3428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCCTGGTGTTCTT	NA	False	NA	9	True	AATAAA	-16	NA	102919171	102959738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ENSMUST00000021329.14	chr11	-	3266	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	54.6867442804927	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGGCATTCTTTGTCT	NA	False	NA	2	True	AATAAA	-31	NA	103588724	103567674	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ENSMUST00000021332.10	chr12	-	1022	7	FSM	ENSMUSG00000020949.10	ENSMUST00000021332.10	1022	7	0	0	0	0	multi-exon	FALSE	canonical	3	9641	junction_1	417.22073161444	26058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	65120781	65109197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
ENSMUST00000021335.7	chr12	+	2096	25	FSM	ENSMUSG00000020952.11	ENSMUST00000021335.7	2096	25	0	0	0	0	multi-exon	TRUE	canonical	3	358	junction_5	42.0133700610757	1087	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTATTCTTGTTTGAA	NA	False	NA	15	True	AATAAA	-15	NA	51424362	51496884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ENSMUST00000021359.7	chr12	-	1706	19	FSM	ENSMUSG00000020974.7	ENSMUST00000021359.7	1706	19	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	34.9372011570955	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTACACATTGTAGTTT	NA	False	NA	-5	True	AATAAA	-20	NA	69274969	69248546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ENSMUST00000021370.10	chr12	-	3340	10	FSM	ENSMUSG00000020988.10	ENSMUST00000021370.10	3340	10	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_5	64.6821287356699	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTTATGATCATATT	NA	False	NA	0	True	AATAAA	-34	NA	69771647	69737206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ENSMUST00000021372.6	chr12	+	1485	5	FSM	ENSMUSG00000054894.7	ENSMUST00000021372.6	1485	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	45.2513811943901	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGGCTAGTCTTTAC	NA	False	NA	2	True	AATAAA	-14	NA	69771735	69791432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_69771789_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ENSMUST00000021375.12	chr12	-	4109	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAGCTATGCTGAAGA	2678	False	NA	-27	True	NA	NA	NA	59058803	59005168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ENSMUST00000021379.8	chr12	+	1588	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	0	0	0	0	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	2935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTAGTTTAATTTCAC	NA	False	NA	NA	False	TTTAAA	-6	NA	59060178	59075256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ENSMUST00000021381.6	chr12	+	3485	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAAATATCTTCATTTA	NA	False	NA	9	True	ATTAAA	-43	NA	59113669	59120784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ENSMUST00000021405.8	chr16	+	950	5	FSM	ENSMUSG00000021018.9	ENSMUST00000021405.8	950	5	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_4	109.533955922353	6325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTCCATTGTCATTGC	904	False	NA	15	True	ATTAAA	-16	NA	20536414	20541017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20539268_20539353_20540659
ENSMUST00000021412.9	chr12	+	1042	7	FSM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	0	0	0	0	multi-exon	FALSE	canonical	3	2423	junction_5	124.008960249743	11719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGGTGCATCCTGTCTTT	NA	False	NA	16	True	AATAAA	-17	NA	55445559	55465239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55465021
ENSMUST00000021413.9	chr12	-	1578	6	FSM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_5	20.9914268214431	519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCCCGCTCGTTTGC	NA	False	NA	-2	True	ATTAAA	-17	NA	55539432	55536194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
ENSMUST00000021416.9	chr12	-	1512	9	FSM	ENSMUSG00000021028.9	ENSMUST00000021416.9	1512	9	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	38.7193427113633	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGTCTTTTTTACTGT	NA	False	NA	NA	False	AATAAA	-33	NA	56392679	56375087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
ENSMUST00000021425.8	chr12	+	1377	9	FSM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	0	0	0	0	multi-exon	TRUE	canonical	3	2699	junction_7	143.152890295656	8057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTCTTACAATCTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	87313471	87320753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ENSMUST00000021428.9	chr12	-	2232	14	FSM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_13	97.7330623652505	2082	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTTTATTTAGTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	87519044	87496679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ENSMUST00000021443.7	chr12	+	3241	28	FSM	ENSMUSG00000021048.8	ENSMUST00000021443.7	3241	28	0	0	0	0	multi-exon	TRUE	canonical	3	837	junction_20	135.484134190258	2741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	7911	False	NA	9	True	AATAAA	-17	NA	76302071	76366577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ENSMUST00000021471.13	chr12	+	2795	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGGTGTTCTCATAAG	NA	False	NA	13	True	ATTAAA	-16	NA	70499868	70514814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ENSMUST00000021486.10	chr12	-	794	4	FSM	ENSMUSG00000021079.17	ENSMUST00000021486.10	794	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	97.112763779479	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTGTCTTTACTGTAT	NA	False	NA	-18	True	AATAAA	-13	NA	71183447	71169946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_71170461_71172235_71172332_71173106_71173172_71183328
ENSMUST00000021497.16	chr12	-	1544	7	FSM	ENSMUSG00000021087.19	ENSMUST00000021497.16	1544	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	4.27200187265877	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACATTTCTCTCTGTCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	72283498	72258526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_72259352_72263544_72263604_72263688_72263736_72264192_72264263_72266030_72266170_72270105_72270314_72283302
ENSMUST00000021512.11	chr12	-	1385	7	FSM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	5.61990510002912	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGACTGCAGACTTAGA	NA	False	NA	43	True	AATAAA	-16	NA	72711683	72697126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_72697392_72699008_72699225_72699874_72699998_72703073_72703314_72704101_72704209_72706117_72706271_72711402
ENSMUST00000021539.16	chr12	+	1742	15	FSM	ENSMUSG00000021115.16	ENSMUST00000021539.16	1742	15	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_12	308.222032678671	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAGCGTTTATTGAATG	NA	False	NA	23	True	AATAAA	-29	NA	105976574	106041668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106039877_106039938_106041265
ENSMUST00000021544.8	chr12	-	1583	9	FSM	ENSMUSG00000021118.8	ENSMUST00000021544.8	1583	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	8.60868021243675	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTCTTGTAGTTA	NA	False	NA	0	True	AATAAA	-21	NA	78953738	78935464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_78936082_78936685_78936765_78938902_78938987_78940850_78940953_78941161_78941350_78941646_78941739_78942905_78943088_78946828_78946994_78953664
ENSMUST00000021548.12	chr12	+	1678	7	FSM	ENSMUSG00000021123.13	ENSMUST00000021548.12	1678	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	2.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTGTCTTTTCTCAG	375	False	NA	NA	False	AATAAA	-19	NA	79255687	79269439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_79255883_79257614_79257734_79258161_79258318_79259426_79259532_79260317_79260528_79265449_79265640_79268736
ENSMUST00000021552.3	chr12	-	2990	2	FSM	ENSMUSG00000021127.8	ENSMUST00000021552.3	2990	2	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGTCTATAGGTTTTT	9167	False	NA	92	True	AATAAA	-18	NA	80159787	80154527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_80157323_80159592
ENSMUST00000021564.11	chr12	+	3439	13	FSM	ENSMUSG00000021136.14	ENSMUST00000021564.11	3439	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	31.9699294476683	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCTGGTGCCTCTTTCT	NA	False	NA	13	True	AATAAA	-15	NA	81073601	81233184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ENSMUST00000021572.11	chr13	-	4526	14	FSM	ENSMUSG00000021147.18	ENSMUST00000021572.11	4526	14	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	12.9902102419544	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTATTATAAAGGTTTGT	NA	False	NA	-29	True	ATTAAA	-18	NA	8921080	8853030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ENSMUST00000021574.8	chr13	-	2442	16	FSM	ENSMUSG00000021149.9	ENSMUST00000021574.8	2442	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	264.705085372802	2089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	AATAAA	-41	NA	9046086	9022515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037996_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9045984
ENSMUST00000021594.5	chr12	+	2019	15	FSM	ENSMUSG00000021177.17	ENSMUST00000021594.5	2019	15	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_14	30.3943469502243	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTACAGGCCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	99857431	99921473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ENSMUST00000021595.10	chr12	+	1591	11	FSM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	0	0	0	0	multi-exon	FALSE	canonical	3	1446	junction_1	298.758363899657	6824	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGGAAGAGTTCATTTT	3973	False	NA	12	True	NA	NA	NA	100076412	100089664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ENSMUST00000021607.9	chr12	-	1990	14	FSM	ENSMUSG00000021190.15	ENSMUST00000021607.9	1990	14	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_3	48.4071734133467	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTTTCTGGACTCT	7489	False	NA	-17	True	AAAACA	-15	NA	102406072	102360356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843_102390015_102405889
ENSMUST00000021610.7	chr12	+	1883	8	FSM	ENSMUSG00000021194.7	ENSMUST00000021610.7	1883	8	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	6.51841974088562	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTTGATTTATTTTCG	NA	False	NA	24	True	AATAAA	-18	NA	102521227	102531287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_102521430_102522143_102522191_102524724_102524819_102525547_102525617_102527603_102527763_102527925_102528343_102528856_102529333_102530868
ENSMUST00000021614.14	chr13	-	2679	22	FSM	ENSMUSG00000021196.15	ENSMUST00000021614.14	2679	22	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_7	371.222751277127	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCCCATGGTACTTGG	NA	False	NA	-14	True	ATTAAA	-10	NA	6698761	6631217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6643136_6643290_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ENSMUST00000021645.9	chr12	+	2008	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	0	0	0	0	multi-exon	TRUE	canonical	3	216	junction_9	23.528907060372	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTCTAATTTTGCCAAA	NA	False	NA	10	True	NA	NA	NA	83567239	83588689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ENSMUST00000021661.13	chr12	+	1602	12	FSM	ENSMUSG00000021235.14	ENSMUST00000021661.13	1602	12	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_6	16.3656564409681	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTTTTCCTCTTCTGA	NA	False	NA	17	True	AATAAA	-17	NA	84408741	84420570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ENSMUST00000021667.7	chr12	+	883	4	FSM	ENSMUSG00000021241.8	ENSMUST00000021667.7	883	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	133.217449641137	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTCTTATCGTGTTTTC	NA	False	NA	12	True	TATAAA	-15	NA	84820024	84821859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_84820146_84820348_84820452_84820566_84820683_84821316
ENSMUST00000021668.10	chr12	-	3299	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	0	0	0	0	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	13470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATCCTGGATGCCTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	84819926	84801335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
ENSMUST00000021669.15	chr12	+	749	8	FSM	ENSMUSG00000021243.15	ENSMUST00000021669.15	749	8	0	0	0	0	multi-exon	FALSE	canonical	3	1900	junction_1	151.77601649692	7170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTGTCTCAATTCTTA	4629	False	NA	23	True	ATTAAA	-25	NA	85017670	85030077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_85017740_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ENSMUST00000021676.12	chr12	-	1169	5	FSM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_4	65.9104506129339	2447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTCTGTGTACTTTGGC	NA	False	NA	-4	True	AATAAA	-21	NA	85871296	85862221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
ENSMUST00000021682.9	chr12	-	3850	10	FSM	ENSMUSG00000021257.15	ENSMUST00000021682.9	3850	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	10.9341463112378	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTAGCCTTGTTATTG	NA	False	NA	0	True	AATAAA	-19	NA	86773234	86747275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86764616_86767003_86767438_86768084_86768155_86768614_86768842_86769618_86770195_86773103
ENSMUST00000021698.13	chr12	-	2852	11	FSM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	4154.7402337571	8931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662723	110657461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662215_110662685
ENSMUST00000021714.9	chr12	+	1308	7	FSM	ENSMUSG00000021286.9	ENSMUST00000021714.9	1308	7	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_5	111.029525602677	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGGCTCTGGCCTCA	NA	False	NA	16	True	ATTAAA	-17	NA	111780603	111794820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
ENSMUST00000021715.6	chr12	-	2422	8	FSM	ENSMUSG00000021287.13	ENSMUST00000021715.6	2422	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	12.8809303758284	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACACTTGCAAATTATT	NA	False	NA	NA	False	AATAAA	-22	NA	111780275	111769626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494_111778654_111780258
ENSMUST00000021719.7	chr12	-	366	4	FSM	ENSMUSG00000021290.7	ENSMUST00000021719.7	366	4	0	0	0	0	multi-exon	TRUE	canonical	3	2424	junction_1	129.659382828839	17564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCTTCCCCTGAGTA	NA	False	NA	-7	True	AATAAA	-18	NA	111933411	111927808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_111927973_111928866_111928891_111929663_111929788_111933357
ENSMUST00000021738.10	chr13	-	2971	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	74.282680798869	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCAACTGGTGCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	13568199	13532204	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ENSMUST00000021790.7	chr13	-	914	6	Antisense	novelGene_ENSMUSG00000021361.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5708	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCGTGCGCTGCGTCCTAG	8939	False	NA	NA	False	NA	NA	NA	41176062	41169767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr13_-_41169875_41170590_41170650_41171181_41171259_41171831_41171934_41174594_41174683_41175581
ENSMUST00000021797.9	chr13	-	1239	8	FSM	ENSMUSG00000021368.16	ENSMUST00000021797.9	1239	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	94.4833426632246	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCCTGGCGTGGCCAT	NA	False	NA	-21	True	AGTAAA	-12	NA	43324977	43305219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324804
ENSMUST00000021806.11	chr13	-	2708	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	22.6436387314407	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGAGCTTGGTAATTT	NA	False	NA	NA	False	AATAAA	-16	NA	47196686	47177018	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
ENSMUST00000021807.13	chr13	-	2556	11	FSM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	0	0	0	0	multi-exon	FALSE	canonical	3	1333	junction_10	113.482333426838	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	-15	True	AATAAA	-20	NA	47259666	47238257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
ENSMUST00000021818.9	chr13	-	1144	8	FSM	ENSMUSG00000021391.11	ENSMUST00000021818.9	1144	8	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_6	22.1387092889263	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGTGCTTTGTACAGTT	NA	False	NA	-4	True	AATAAA	-21	NA	49806261	49617498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
ENSMUST00000021843.13	chr13	+	1063	8	FSM	ENSMUSG00000046949.17	ENSMUST00000021843.13	1063	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	70.4179939898249	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTTGCACTGTATTAG	NA	False	NA	13	True	AATACA	-25	NA	34148733	34169629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_34148784_34150027_34150110_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ENSMUST00000021854.14	chr13	-	1746	10	FSM	ENSMUSG00000021417.16	ENSMUST00000021854.14	1746	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	45.5959170795038	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTAAGAATTCATGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	35178264	35161731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177812
ENSMUST00000021857.13	chr13	+	2125	7	FSM	ENSMUSG00000021420.14	ENSMUST00000021857.13	2125	7	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	25.2300526268883	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36301394	36721567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_36301989_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ENSMUST00000021866.10	chr13	+	2738	17	FSM	ENSMUSG00000021428.10	ENSMUST00000021866.10	2738	17	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	18.4889113727661	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTGCATTCTTGCTA	4488	False	NA	18	True	AATAAA	-19	NA	38220970	38245409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ENSMUST00000021907.9	chr13	-	1354	7	FSM	ENSMUSG00000021456.9	ENSMUST00000021907.9	1354	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	7.5	440	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTTATGGGTCTTCTG	NA	False	NA	2	True	AATAAA	-20	NA	63006236	62984690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62985095_62988084_62988205_62989599_62989738_62997190_62997332_63001787_63001881_63002717_63002881_63005941
ENSMUST00000021913.16	chr13	-	1320	10	FSM	ENSMUSG00000021460.18	ENSMUST00000021913.16	1320	10	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_3	77.7090172246741	414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAGTTATACCAAATGT	NA	False	NA	-14	True	AATAAA	-22	NA	53083697	52989154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53083490
ENSMUST00000021920.8	chr13	-	2606	15	FSM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_11	13.0690864412232	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCTGTTTGGATAGCAG	1829	False	NA	-18	True	AATAAA	-27	NA	53531433	53486783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
ENSMUST00000021930.10	chr13	+	2783	11	FSM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_1	55.358919787149	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTGTCTCTTACTTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	54225887	54262361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ENSMUST00000021933.8	chr13	-	1971	8	FSM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	0	0	0	0	multi-exon	FALSE	canonical	3	1187	junction_3	95.3616103822386	9290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCAAGTCTCATATCTG	NA	False	NA	NA	False	NA	NA	NA	64518120	64511027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
ENSMUST00000021940.8	chr13	-	4315	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	0	0	0	0	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	2595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGAGTTGTGTGCTCTGT	2839	False	NA	-3	True	NA	NA	NA	55510596	55491645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ENSMUST00000021941.8	chr13	-	1327	6	FSM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	5.62138772902208	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGTACAGTCTATCACC	6155	False	NA	-7	True	NA	NA	NA	55477571	55472980	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081_55477188_55477410
ENSMUST00000021956.9	chr13	-	2205	17	FSM	ENSMUSG00000021494.10	ENSMUST00000021956.9	2205	17	0	0	0	0	multi-exon	FALSE	canonical	3	642	junction_9	44.9861089671023	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCTCTCACCCACCTG	NA	False	NA	1	True	ATTAAA	-27	NA	55684471	55678222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ENSMUST00000021963.5	chr13	+	1382	4	FSM	ENSMUSG00000021501.5	ENSMUST00000021963.5	1382	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	4.49691252107735	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGAAGTCTGTACATT	NA	False	NA	NA	False	AATAAA	-21	NA	55770817	55780224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_55771070_55772523_55772985_55776389_55776456_55779621
ENSMUST00000021971.6	chr13	+	3374	8	FSM	ENSMUSG00000021509.6	ENSMUST00000021971.6	3374	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	3.84919816723071	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTGCATCTGTCTTACC	NA	False	NA	36	True	AATAAA	-26	NA	56586167	56622052	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162_56618294_56619742
ENSMUST00000021991.11	chr13	-	1479	8	FSM	ENSMUSG00000021519.12	ENSMUST00000021991.11	1479	8	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_6	16.4005973012185	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGTTTCAATATTA	377	False	NA	NA	False	AATAAA	-18	NA	67081152	67060181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ENSMUST00000021993.5	chr13	-	535	4	FSM	ENSMUSG00000021520.5	ENSMUST00000021993.5	535	4	0	0	0	0	multi-exon	FALSE	canonical	3	4784	junction_3	381.861231339344	16517	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGATTATTTGAATTCAA	7712	False	NA	-25	True	AATAAA	-18	NA	67053442	67048680	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67048891_67049465_67049633_67050793_67050866_67053356
ENSMUST00000022030.11	chr13	+	2045	9	FSM	ENSMUSG00000021548.11	ENSMUST00000022030.11	2045	9	0	0	0	0	multi-exon	FALSE	canonical	3	824	junction_5	83.2840583485219	3862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGTGTTTTGTTTTGA	NA	False	NA	8	True	AATAAA	-19	NA	85337526	85361842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ENSMUST00000022039.7	chr13	-	3954	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	0	0	0	0	multi-exon	TRUE	canonical	3	421	junction_9	46.3947102135844	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTCATCCTCTCTAGGT	NA	False	NA	NA	False	AATAAA	-16	NA	59823625	59782439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ENSMUST00000022060.7	chr13	-	1131	6	FSM	ENSMUSG00000021576.7	ENSMUST00000022060.7	1131	6	0	0	0	0	multi-exon	FALSE	canonical	3	601	junction_2	85.1666601435092	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGCTGGTTTTTTGCT	NA	False	NA	1	True	AATAAA	-25	NA	74465440	74451627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_74452168_74453659_74453770_74457802_74457962_74459786_74459832_74464448_74464511_74465225
ENSMUST00000022062.8	chr13	-	2900	15	FSM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	0	0	0	0	multi-exon	FALSE	canonical	3	1480	junction_7	176.694897308026	4511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	-8	True	NA	NA	NA	74498399	74470372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ENSMUST00000022082.8	chr13	+	1345	3	FSM	ENSMUSG00000021591.9	ENSMUST00000022082.8	1345	3	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	16	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTGTCCGGTTCTGT	NA	False	NA	30	True	ATTAAA	-22	NA	75987986	75998270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_75988295_75995288_75995418_75997362
ENSMUST00000022089.10	chr13	+	913	4	FSM	ENSMUSG00000021598.10	ENSMUST00000022089.10	913	4	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_3	16.1314048434171	2849	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATGTAATTCTTAAAAT	NA	False	NA	27	True	AATAAA	-23	NA	69957959	69964223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_69958172_69959725_69959810_69961822_69961926_69963709
ENSMUST00000022097.6	chr13	-	568	4	FSM	ENSMUSG00000021606.9	ENSMUST00000022097.6	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	2374	junction_2	33.95094500403	10033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGAGTTGTTTCTTCCTT	NA	False	NA	-3	True	AATAAA	-19	NA	73476661	73467992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476457
ENSMUST00000022098.10	chr13	+	923	2	FSM	ENSMUSG00000021607.10	ENSMUST00000022098.10	923	2	0	0	0	0	multi-exon	FALSE	canonical	3	623	junction_1	0	3602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGAGTAGTAGTGTTCT	NA	False	NA	13	True	ATTAAA	-26	NA	73479106	73480297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_73479211_73479478
ENSMUST00000022115.14	chr13	-	1540	8	FSM	ENSMUSG00000021615.14	ENSMUST00000022115.14	1540	8	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	13.6993966796993	403	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATGTTATTTAACTG	NA	False	NA	-7	True	AATAAA	-14	NA	90237727	89997039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237615
ENSMUST00000022119.6	chr13	-	1583	8	FSM	ENSMUSG00000021619.7	ENSMUST00000022119.6	1583	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	11.5121940673747	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTGACTACTGTTACTT	NA	False	NA	NA	False	ATTAAA	-15	NA	91372087	91083474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91372057
ENSMUST00000022121.13	chr13	-	1541	6	FSM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	29.1108227296997	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	91955824	91944651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869_91954280_91955728
ENSMUST00000022136.14	chr13	-	2839	17	FSM	ENSMUSG00000021635.15	ENSMUST00000022136.14	2839	17	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_16	42.8397723354128	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	100787559	100753671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787329
ENSMUST00000022140.12	chr13	-	2839	9	FSM	ENSMUSG00000021638.13	ENSMUST00000022140.12	2839	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	20.6272726020674	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTCATTTGATGTCATT	NA	False	NA	NA	False	ATTAAA	-22	NA	100689226	100634270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100689071
ENSMUST00000022145.15	chr13	+	601	3	FSM	ENSMUSG00000021643.16	ENSMUST00000022145.15	601	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	3	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGAATATTATTTTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	100244519	100250746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_100244738_100245530_100245640_100250472
ENSMUST00000022147.15	chr13	+	1222	9	FSM	ENSMUSG00000021645.17	ENSMUST00000022147.15	1222	9	0	0	0	0	multi-exon	TRUE	canonical	3	544	junction_6	97.8154352594722	2702	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTGACTTTATAGATA	NA	False	NA	17	True	AATAAA	-13	NA	100261359	100274198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100272196_100272248_100273888
ENSMUST00000022148.7	chr13	-	2123	17	FSM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	0	0	0	0	multi-exon	FALSE	canonical	2	186	junction_5	41.3428878405948	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTAGGGTTGTTGAGA	669	False	NA	-6	True	AATAAA	-15	NA	100152147	100085040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ENSMUST00000022153.8	chr13	-	1704	10	FSM	ENSMUSG00000021650.8	ENSMUST00000022153.8	1704	10	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_5	28.5894740191448	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGTTGTGTTTCTTTTC	NA	False	NA	-11	True	AATAAA	-16	NA	99481213	99456154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
ENSMUST00000022164.16	chr13	+	1755	9	FSM	ENSMUSG00000021661.17	ENSMUST00000022164.16	1755	9	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_1	23.3559414282533	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGATTATATGCTTGTC	NA	False	NA	14	True	AATAAA	-24	NA	98399749	98410426	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
ENSMUST00000022169.10	chr13	-	1905	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	0	0	0	0	multi-exon	FALSE	canonical	3	2035	junction_5	137.076923076923	7840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	False	NA	1	True	AATAAA	-27	NA	97334865	97312838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUST00000022176.15	chr13	-	4425	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTGTAAGCAGTGGCT	NA	False	NA	-5	True	AGTAAA	-22	NA	96807444	96785474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ENSMUST00000022185.10	chr13	-	2741	2	FSM	ENSMUSG00000021678.10	ENSMUST00000022185.10	2741	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	439	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAAGTT	9826	False	NA	NA	False	AATAAA	-16	NA	95661735	95648239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_95650790_95661544
ENSMUST00000022196.5	chr13	+	4021	27	FSM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_8	45.9393251760748	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTCCTAATCCTTAC	NA	False	NA	9	True	AATAAA	-19	NA	94495467	94702825	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ENSMUST00000022203.10	chr13	+	2051	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	2752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGCCTACAGTTTTTCC	NA	False	NA	NA	False	AGTAAA	-13	NA	107083666	107096268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ENSMUST00000022212.9	chr13	+	2800	14	FSM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	11.0769230769231	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTCTCCTGTCCTTGC	NA	False	NA	6	True	AATAAA	-17	NA	110531579	110537378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124_110533255_110533440_110533529_110534004_110534101_110534221_110534421_110534507_110534656_110534906_110535005_110535212_110535343_110535554_110535796_110535913_110536044_110536296_110536408_110536566
ENSMUST00000022220.13	chr13	-	3937	24	FSM	ENSMUSG00000014850.16	ENSMUST00000022220.13	3937	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	29.9229002971439	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGCTCATTGCATGGCG	NA	False	NA	NA	False	AATAAA	-14	NA	92491511	92348393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372237_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481610_92483240_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ENSMUST00000022224.16	chr13	-	2342	13	FSM	ENSMUSG00000021711.18	ENSMUST00000022224.16	2342	13	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_6	196.200152905139	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGATTTTTTTCTTTC	NA	False	NA	-2	True	AATAAA	-42	NA	104314931	104279824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUST00000022225.12	chr13	+	3416	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	34.1	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGACTGTGACGTATA	NA	False	NA	11	True	AATATA	-25	NA	104315304	104339525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ENSMUST00000022226.6	chr13	-	2342	11	FSM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_6	27.1368752806951	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATACGTGTCAAATGAC	NA	False	NA	-13	True	TATAAA	-11	NA	104365330	104341631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
ENSMUST00000022228.13	chr13	-	2071	14	FSM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_8	84.1316241226496	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGCCTCCCGCTTTATT	NA	False	NA	1	True	AATAAA	-37	NA	104953461	104767647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ENSMUST00000022230.15	chr13	+	2365	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	17.2536228079786	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAAGTCATTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	104953684	104975782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
ENSMUST00000022256.5	chr14	+	1387	8	FSM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	0	0	0	0	multi-exon	FALSE	canonical	3	1151	junction_1	36.7689975886408	5153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTCTTAAACATACA	NA	False	NA	25	True	AATAAA	-27	NA	8348778	8357589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_8349025_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ENSMUST00000022268.10	chr14	+	1513	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	0	0	0	0	multi-exon	FALSE	canonical	3	2290	junction_6	170.664134819183	6888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	AATAAA	-16	NA	14296747	14303777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ENSMUST00000022272.14	chr14	-	1650	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	7.5	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGGTTGTATTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	14255633	14246209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_14247587_14249552_14249623_14255430
ENSMUST00000022281.5	chr13	-	3689	27	FSM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	0	0	0	0	multi-exon	TRUE	canonical	3	524	junction_21	59.6473487509525	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGAATTTCAGGAACC	7236	False	NA	NA	False	AAAAAG	-14	NA	113063932	113003951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ENSMUST00000022282.6	chr13	-	1042	3	FSM	ENSMUSG00000021760.6	ENSMUST00000022282.6	1042	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	4	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGTGCATTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	113182944	113179292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_113179834_113181965_113182228_113182705
ENSMUST00000022294.15	chr14	-	1199	5	FSM	ENSMUSG00000021772.16	ENSMUST00000022294.15	1199	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	46.4885738649832	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATACCATGGGAACTCTT	NA	False	NA	-39	True	AATAAA	-14	NA	4198469	4189258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_4189750_4191150_4191393_4191594_4191853_4192889_4193001_4198372
ENSMUST00000022295.4	chr14	-	981	6	FSM	ENSMUSG00000021773.12	ENSMUST00000022295.4	981	6	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	9.09065454189081	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCATCCTCTTCC	NA	False	NA	-10	True	AATAAA	-17	NA	21898962	21897246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_21897496_21897681_21897816_21897940_21898189_21898277_21898384_21898608_21898737_21898846
ENSMUST00000022296.7	chr14	+	1408	6	FSM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	27.2073519475895	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGCTGTGTTCATTTC	NA	False	NA	24	True	AATAAA	-21	NA	4137836	4186974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_4138010_4138561_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
ENSMUST00000022317.15	chr14	-	1537	6	FSM	ENSMUSG00000021792.16	ENSMUST00000022317.15	1537	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	72.4911029023562	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATCACCTCTGTGCACA	NA	False	NA	-22	True	AATAAA	-11	NA	40735732	40715696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726161_40735654
ENSMUST00000022345.7	chr14	-	1631	5	FSM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	0	0	0	0	multi-exon	TRUE	canonical	3	896	junction_2	62.1711347813437	2142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTATGTGTTTTGAAC	NA	False	NA	NA	False	ATTAAA	-23	NA	20438978	20434705	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671
ENSMUST00000022368.4	chr14	+	2342	11	FSM	ENSMUSG00000021822.4	ENSMUST00000022368.4	2342	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.66332495807108	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCTGGTTTCTCCATG	NA	False	NA	NA	False	AATAAA	-14	NA	20886727	20893453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_20886803_20887116_20887204_20887677_20887709_20887845_20887954_20888580_20888756_20889163_20889256_20889399_20889623_20889842_20889992_20890565_20890707_20891013_20891163_20892341
ENSMUST00000022369.9	chr14	+	5267	21	FSM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	0	0	0	0	multi-exon	TRUE	canonical	3	265	junction_11	15.7968351260624	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTAATTGAGGTTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	20979465	21083744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ENSMUST00000022378.9	chr14	-	4418	16	FSM	ENSMUSG00000021831.10	ENSMUST00000022378.9	4418	16	0	0	0	0	multi-exon	FALSE	canonical	2	315	junction_8	121.531596257471	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGTCTTTGGTCAGTT	NA	False	NA	89	True	AATAAA	-20	NA	45556029	45520543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45533428_45533441_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ENSMUST00000022380.9	chr14	+	2234	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	0	0	0	0	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	7965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAATGATCCAGCTAGG	NA	False	NA	NA	False	AATAAA	-39	NA	45567244	45587162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ENSMUST00000022391.14	chr14	+	4484	42	FSM	ENSMUSG00000021843.18	ENSMUST00000022391.14	4484	42	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_41	205.185118315409	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	2353	False	NA	23	True	AATAAA	-23	NA	47901212	47974020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ENSMUST00000022416.15	chr14	+	2394	15	FSM	ENSMUSG00000021866.16	ENSMUST00000022416.15	2394	15	0	0	0	0	multi-exon	TRUE	canonical	3	387	junction_6	25.4603533329122	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTGCCAGCATGTTT	336	False	NA	26	True	AATAAA	-34	NA	25842579	25887228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_25842720_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ENSMUST00000022419.7	chr14	+	1549	6	FSM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_3	21.4532048887806	438	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTCTCTGGTTTTGGA	392	False	NA	NA	False	AATAAA	-18	NA	25694593	25700892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_25694848_25695896_25695928_25696427_25696517_25697996_25698094_25698689_25698766_25699890
ENSMUST00000022428.13	chr14	+	1518	2	FSM	ENSMUSG00000021876.16	ENSMUST00000022428.13	1518	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCGGGATTTGTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	51328533	51343604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_51328711_51342263
ENSMUST00000022429.9	chr14	+	2165	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	0	0	0	0	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	3452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	1686	False	NA	NA	False	NA	NA	NA	26359228	26378413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ENSMUST00000022458.11	chr14	+	3460	17	FSM	ENSMUSG00000021901.11	ENSMUST00000022458.11	3460	17	0	0	0	0	multi-exon	TRUE	canonical	3	305	junction_12	31.9899886683318	397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGGTCGGTAGGCTGG	NA	False	NA	25	True	AATAAA	-32	NA	30973406	30981901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ENSMUST00000022480.8	chr14	+	3449	24	FSM	ENSMUSG00000021913.9	ENSMUST00000022480.8	3449	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	116.566166092502	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGGATTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	32043975	32069777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054263_32054407_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ENSMUST00000022496.9	chr14	-	4069	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	0	0	0	0	multi-exon	TRUE	canonical	2	379	junction_16	73.5790391347971	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATTGAAAGACTTATT	6546	False	NA	-12	True	AATAAA	-22	NA	61677323	61602659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ENSMUST00000022499.13	chr14	-	1494	11	Antisense	novelGene_ENSMUSG00000021932.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5627	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCCTGCCTCCATTTCC	NA	False	NA	NA	False	NA	NA	NA	62610441	62569516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr14_-_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ENSMUST00000022504.12	chr14	-	2587	12	FSM	ENSMUSG00000021936.15	ENSMUST00000022504.12	2587	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.14655787270487	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAGTAGCACACAGCC	NA	False	NA	NA	False	TTTAAA	-22	NA	33169102	33103005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_33104277_33105830_33105909_33108518_33108583_33109128_33109254_33110756_33110940_33112198_33112271_33114898_33115065_33124580_33124720_33124821_33124881_33130004_33130135_33132812_33132982_33168971
ENSMUST00000022517.9	chr14	-	1497	8	FSM	ENSMUSG00000021947.12	ENSMUST00000022517.9	1497	8	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_7	4.40778532015472	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAATCTATTTCTACAC	NA	False	NA	37	True	AATAAA	-16	NA	57635986	57512449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_57513020_57513373_57513481_57523821_57523928_57541049_57541245_57550424_57550587_57600378_57600506_57620214_57620323_57635864
ENSMUST00000022518.8	chr14	-	836	5	FSM	ENSMUSG00000021951.8	ENSMUST00000022518.8	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_4	52.3115665986023	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGTCATGAGGTTGAG	NA	False	NA	-9	True	AATAAA	-19	NA	57809026	57787054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378_57803542_57808999
ENSMUST00000022519.15	chr14	+	1880	12	FSM	ENSMUSG00000021950.16	ENSMUST00000022519.15	1880	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.55345522642137	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGGATTTGTGGGG	NA	False	NA	NA	False	CATAAA	-19	NA	33807937	33822528	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_33808034_33811467_33811559_33812563_33812659_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813_33819937_33821647
ENSMUST00000022522.15	chr14	-	1881	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	0	0	0	0	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	17672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTTTTACTTAGGATT	NA	False	NA	-16	True	ATTAAA	-18	NA	63746541	63729795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ENSMUST00000022528.6	chr14	+	1295	7	FSM	ENSMUSG00000021958.6	ENSMUST00000022528.6	1295	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	11.9443152447793	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGAGCCTTTCACATGA	4087	False	NA	NA	False	AATAAA	-39	NA	64097812	64157304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_64097897_64101664_64101775_64103551_64103645_64105967_64106047_64109750_64109844_64115560_64115638_64156545
ENSMUST00000022535.9	chr14	+	5576	10	FSM	ENSMUSG00000021962.10	ENSMUST00000022535.9	5576	10	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_5	16.6332999331662	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	30201568	30249020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ENSMUST00000022536.3	chr14	-	2260	9	FSM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_3	28.547110186497	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTATGTTGCCAACTC	NA	False	NA	-7	True	AATAAA	-19	NA	58063620	58044017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
ENSMUST00000022553.6	chr14	+	3037	11	FSM	ENSMUSG00000021981.11	ENSMUST00000022553.6	3037	11	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	43.2892596379287	838	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGGTCTCATTCCTCT	NA	False	NA	5	True	AATAAA	-12	NA	59678429	59786352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_59678468_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ENSMUST00000022580.8	chr14	-	3588	10	FSM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	8.56348838577675	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGGCTTACAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	76024477	75997556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76014435_76014567_76024364
ENSMUST00000022587.10	chr14	+	1762	3	FSM	ENSMUSG00000022010.20	ENSMUST00000022587.10	1762	3	0	0	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	40	8800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGTTTCTATATGACGC	6539	False	NA	31	True	AATAAA	-21	NA	76741917	76745205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_76742282_76742688_76742738_76743856
ENSMUST00000022595.8	chr14	-	918	5	FSM	ENSMUSG00000022018.8	ENSMUST00000022595.8	918	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	11.7046999107196	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACTTTGAAAGCTGCC	NA	False	NA	-11	True	AATAAA	-14	NA	79539085	79526195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_79526560_79527683_79527747_79529110_79529219_79538154_79538341_79538888
ENSMUST00000022600.4	chr14	+	1799	11	FSM	ENSMUSG00000022022.4	ENSMUST00000022600.4	1799	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	10.5683489722851	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGATGTGCCTACAGAGT	NA	False	NA	1	True	AATAAA	-12	NA	79635211	79661027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_79635477_79637131_79637240_79638861_79639288_79640264_79640357_79644016_79644099_79644285_79644394_79649081_79649255_79650426_79650545_79653317_79653455_79656627_79656727_79660836
ENSMUST00000022609.7	chr14	-	2851	15	FSM	ENSMUSG00000022031.7	ENSMUST00000022609.7	2851	15	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_14	46.0192949772602	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	3444	False	NA	NA	False	AATAAA	-16	NA	65830524	65767897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830373
ENSMUST00000022612.10	chr14	+	1720	8	FSM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_5	59.6342594316319	2332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCATTATCTGTTTTT	NA	False	NA	25	True	AATAAA	-41	NA	66043285	66055271	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_66043584_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
ENSMUST00000022613.10	chr14	-	2913	11	FSM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_8	61.5078043828586	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6344	False	NA	-11	True	ATTAAA	-14	NA	66071443	66056486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ENSMUST00000022623.13	chr14	+	3678	6	FSM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_4	10.4957134107215	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTTTTTTATTGTC	NA	False	NA	31	True	NA	NA	NA	66534479	66548873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
ENSMUST00000022634.9	chr14	-	3238	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	44.8508639827596	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTCCATATATCATTTT	NA	False	NA	-12	True	ATTAAA	-16	NA	67246326	67222687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
ENSMUST00000022650.9	chr14	+	2797	18	FSM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	0	0	0	0	multi-exon	FALSE	canonical	2	66	junction_8	18.7005171736119	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGACTGTAGAGTTTTTA	NA	False	NA	15	True	AATAAA	-17	NA	99337342	99491929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99491596
ENSMUST00000022656.8	chr14	+	2726	12	FSM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	51.3357124417381	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTTTCCTTGTTCTGT	NA	False	NA	5	True	AATAAA	-16	NA	99283812	99311976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ENSMUST00000022663.7	chr14	+	3179	8	FSM	ENSMUSG00000022074.7	ENSMUST00000022663.7	3179	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	19.7556501863572	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGTGTACGTGGCCCTC	NA	False	NA	4	True	NA	NA	NA	70004920	70021860	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015169_70015265_70017952_70018023_70019680
ENSMUST00000022696.8	chr14	-	4472	28	FSM	ENSMUSG00000022100.15	ENSMUST00000022696.8	4472	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	88.8509332544799	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAACATTGGATGGAGAAA	NA	False	NA	NA	False	AATAAA	-37	NA	71003994	70902257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920297_70921095_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ENSMUST00000022697.7	chr14	-	1689	5	FSM	ENSMUSG00000022101.7	ENSMUST00000022697.7	1689	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	15.3195136998535	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGTCCGCTGAAGAAAGG	NA	False	NA	0	True	AATAAA	-16	NA	70879708	70873642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_70874464_70875906_70876014_70876241_70876420_70878971_70879009_70879162
ENSMUST00000022704.9	chr14	-	1796	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_1	88.6128658830082	2551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTGGATGCTGTTTC	NA	False	NA	NA	False	AATAAA	-26	NA	73622729	73599665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
ENSMUST00000022705.7	chr14	+	1328	7	FSM	ENSMUSG00000022109.7	ENSMUST00000022705.7	1328	7	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_6	14.7356333046425	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTTTTTTCAATTTTT	NA	False	NA	15	True	AATAAA	-17	NA	73747464	73755985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
ENSMUST00000022721.8	chr14	+	2445	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTGCATCTTGTATCTT	NA	False	NA	6	True	NA	NA	NA	103307651	103315064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
ENSMUST00000022727.10	chr14	-	1682	12	FSM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_8	15.4084875183551	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATGTCTTTTTATTT	250	False	NA	-4	True	ATTAAA	-20	NA	118370159	118349887	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
ENSMUST00000022751.15	chr15	+	1832	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTCCTTTTATTCTT	NA	False	NA	31	True	AGTAAA	-31	NA	5215040	5247817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ENSMUST00000022765.14	chr14	-	2906	8	FSM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_5	9.75202752335772	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTGTCATTTCTGAC	NA	False	NA	1	True	ATTAAA	-27	NA	52517002	52499215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
ENSMUST00000022766.8	chr14	+	5350	10	FSM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	167.945390889383	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTCTAGTCTGGTCTGTG	NA	False	NA	21	True	AAAAAG	-14	NA	52516602	52533858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_52516690_52516844_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ENSMUST00000022767.16	chr14	-	2025	11	FSM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_7	19.5910693939866	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCTTTCCACTTAGTG	NA	False	NA	-16	True	AATAAA	-39	NA	52542585	52532297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
ENSMUST00000022781.8	chr14	-	878	3	FSM	ENSMUSG00000022174.9	ENSMUST00000022781.8	878	3	0	0	0	0	multi-exon	FALSE	canonical	3	1530	junction_1	8	7172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTCCTTCATGTTTGTG	NA	False	NA	-11	True	ATTAAA	-24	NA	54491561	54472935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_54473171_54480155_54480326_54491088
ENSMUST00000022784.9	chr14	-	1587	10	FSM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_5	37.1423687391577	868	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTAGTCATTTTTCCT	NA	False	NA	-1	True	AATAAA	-20	NA	54791818	54779241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
ENSMUST00000022786.6	chr14	-	2670	7	FSM	ENSMUSG00000022179.6	ENSMUST00000022786.6	2670	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	4.10960933531265	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTGTTGGGCTTAGT	NA	False	NA	-1	True	NA	NA	NA	54843450	54821119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_54822164_54822435_54822549_54823108_54823213_54823392_54823455_54828578_54828897_54832570_54833409_54843259
ENSMUST00000022803.6	chr14	-	899	3	FSM	ENSMUSG00000022193.8	ENSMUST00000022803.6	899	3	0	0	0	0	multi-exon	FALSE	canonical	3	1854	junction_2	4.5	21061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGAGTCCACAGTTATT	8624	False	NA	-17	True	AATAAA	-18	NA	54855479	54851575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_54851939_54853971_54854279_54855250
ENSMUST00000022815.10	chr14	+	1200	11	FSM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_1	176.552230232303	3395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTTTTTGCCATACAT	NA	False	NA	18	True	AATAAA	-23	NA	55252910	55261594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ENSMUST00000022816.15	chr15	-	3372	5	FSM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	0	0	0	0	multi-exon	FALSE	canonical	3	7728	junction_1	236.548620794965	27064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTTTGTGTTATCCCA	809	False	NA	NA	False	AATAAA	-11	NA	11996144	11981424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996036
ENSMUST00000022821.8	chr14	+	1392	8	FSM	ENSMUSG00000022210.8	ENSMUST00000022821.8	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	11.5987332172483	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGCGTGTTTATTTCTC	NA	False	NA	11	True	AATAAA	-26	NA	55716214	55727797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724621_55724716_55724769_55725040_55725176_55725616_55725673_55727275
ENSMUST00000022828.9	chr14	-	855	5	FSM	ENSMUSG00000022217.15	ENSMUST00000022828.9	855	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	3.69966214673719	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATGTATTTATTGTGT	NA	False	NA	-5	True	AATAAA	-17	NA	55822759	55818978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55819201_55819337_55819433_55819512_55819583_55822135_55822213_55822368
ENSMUST00000022830.14	chr14	-	1892	10	FSM	ENSMUSG00000022221.15	ENSMUST00000022830.14	1892	10	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	8.73194786861711	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTCTGAGGTGTCAATC	NA	False	NA	-1	True	AATAAA	-20	NA	56026322	56022451	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025839_56026073
ENSMUST00000022842.16	chr15	+	1853	11	Antisense	novelGene_ENSMUSG00000022234.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22069	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCATGCGCAGTGCAGAC	NA	False	NA	NA	False	NA	NA	NA	31590945	31601950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr15_+_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ENSMUST00000022855.12	chr15	-	2664	10	FSM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	0	0	0	0	multi-exon	FALSE	canonical	3	2074	junction_1	190.855449147086	6110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATAAGGCTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	10486033	10474864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
ENSMUST00000022856.15	chr15	+	1514	6	FSM	ENSMUSG00000022248.15	ENSMUST00000022856.15	1514	6	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_1	183.88039590995	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTACTGTCCTGTGTCTTT	4	True	NA	27	True	AATAAA	-32	NA	10486103	10493775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_10486351_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
ENSMUST00000022867.5	chr15	+	1902	7	FSM	ENSMUSG00000022257.5	ENSMUST00000022867.5	1902	7	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_4	34.9698282650757	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGTGGCTCCGCTGACT	31	True	NA	NA	False	ATTAAA	-22	NA	34238173	34284448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277674_34283445
ENSMUST00000022890.10	chr15	-	4277	10	FSM	ENSMUSG00000022280.10	ENSMUST00000022890.10	4277	10	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	15.6946165182307	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGTGCCCAGGAAT	NA	False	NA	1	True	AATAAA	-17	NA	36283293	36240078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_36242212_36244232_36244377_36245561_36245776_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
ENSMUST00000022894.14	chr15	-	3288	7	FSM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	1526.66484716049	12394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	NA	False	NA	-39	True	NA	NA	NA	36794782	36771013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793920_36794388
ENSMUST00000022901.16	chr15	-	4561	9	FSM	ENSMUSG00000022292.17	ENSMUST00000022901.16	4561	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	8.71779788708135	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTAGTTATATCATTTT	7108	False	NA	NA	False	AATAAA	-16	NA	37961347	37924195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_37927642_37929281_37929396_37931845_37931951_37937459_37937594_37944741_37944837_37945282_37945417_37946978_37947096_37953842_37953999_37961087
ENSMUST00000022904.8	chr15	+	2071	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	0	0	0	0	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	3208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTAGTCATTTATTTT	184	False	NA	31	True	AATAAA	-17	NA	38662176	38692690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ENSMUST00000022909.10	chr15	+	1551	11	FSM	ENSMUSG00000022300.11	ENSMUST00000022909.10	1551	11	0	0	0	0	multi-exon	FALSE	canonical	2	478	junction_2	96.4514903980234	3003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCAGTTGTGTGTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	38976259	39010251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_38976447_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
ENSMUST00000022913.6	chr15	+	1997	4	FSM	ENSMUSG00000022303.10	ENSMUST00000022913.6	1997	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.9938250421547	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGATCATGTGACTTT	NA	False	NA	10	True	NA	NA	NA	39609327	39624334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_39609364_39617579_39618622_39622709_39623019_39623724
ENSMUST00000022925.10	chr15	-	1295	8	FSM	ENSMUSG00000022312.12	ENSMUST00000022925.10	1295	8	0	0	0	0	multi-exon	FALSE	canonical	3	1820	junction_5	77.7200628104822	12701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTGTATTTATGGTG	NA	False	NA	-12	True	AATAAA	-24	NA	51728919	51649953	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
ENSMUST00000022927.11	chr15	-	3956	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_13	70.6746022859982	1529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTAGACCCGGGAAGA	NA	False	NA	NA	False	NA	NA	NA	51855143	51825635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ENSMUST00000022945.9	chr8	-	2156	13	FSM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	0	0	0	0	multi-exon	TRUE	canonical	3	204	junction_9	39.0672497112351	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTGAAATGTGGATT	NA	False	NA	-5	True	TATAAA	-15	NA	4829554	4785975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
ENSMUST00000022946.6	chr15	-	1004	6	FSM	ENSMUSG00000022323.12	ENSMUST00000022946.6	1004	6	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_4	17.7245592328836	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTTAATTTTGTTC	NA	False	NA	-10	True	AATAAA	-21	NA	34495401	34484166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_34484682_34485745_34485802_34486756_34486826_34487887_34487943_34488719_34488826_34495198
ENSMUST00000022952.6	chr15	+	1724	4	FSM	ENSMUSG00000022330.6	ENSMUST00000022952.6	1724	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	10.1434160364686	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTCTTGAGATTCATCT	117	False	NA	13	True	AATAAA	-16	NA	35296243	35303451	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_35296614_35300334_35301102_35302057_35302158_35302964
ENSMUST00000022960.4	chr15	+	1506	13	Antisense	novelGene_ENSMUSG00000022336.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	11100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAAACTTTATTGACAGC	NA	False	NA	NA	False	NA	NA	NA	43113453	43146115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr15_+_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ENSMUST00000022962.8	chr15	+	1231	11	FSM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_9	74.0384359640315	3447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGAAAATTCTAGTTTC	NA	False	NA	10	True	AATAAA	-20	NA	43340624	43391159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ENSMUST00000022976.6	chr15	-	4033	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_18	44.6203943487363	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	-3	True	AGTAAA	-16	NA	59246016	59203845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ENSMUST00000022977.14	chr15	+	2758	11	FSM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_1	53.8835782033822	1051	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTTTTGGTTTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	59186929	59203041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
ENSMUST00000022980.5	chr15	+	704	4	FSM	ENSMUSG00000022354.5	ENSMUST00000022980.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	3	3308	junction_3	178.75557489364	16594	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCTGTGCCTGAAGTGT	2816	False	NA	13	True	AATAAA	-14	NA	58805604	58811337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_58805788_58808116_58808310_58809200_58809315_58811123
ENSMUST00000022992.13	chr15	+	3311	21	FSM	ENSMUSG00000022364.15	ENSMUST00000022992.13	3311	21	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	36.9403234961471	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775594	57833457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ENSMUST00000022998.14	chr15	+	3144	22	FSM	ENSMUSG00000022369.14	ENSMUST00000022998.14	3144	22	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_14	23.9707872097639	496	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGATTGCATGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	55420803	55489819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
ENSMUST00000023019.12	chr15	+	1526	11	FSM	ENSMUSG00000022386.13	ENSMUST00000023019.12	1526	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	10.36532681588	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCATGTGTCTGGGGCTTG	NA	False	NA	NA	False	AATAAA	-14	NA	85763520	85781593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85778081_85778154_85778222_85779126_85779228_85780560_85780706_85781035_85781119_85781225
ENSMUST00000023029.15	chr15	+	3487	17	FSM	ENSMUSG00000022394.15	ENSMUST00000023029.15	3487	17	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_15	40.713125570877	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGATATCAGATGAGT	NA	False	NA	17	True	AATAAA	-24	NA	81548089	81572516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ENSMUST00000023036.7	chr15	+	1675	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	0	0	0	0	multi-exon	FALSE	canonical	3	4160	junction_1	231.400491572512	18026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTGTCATTTTCACC	NA	False	NA	17	True	NA	NA	NA	81350496	81360570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ENSMUST00000023039.15	chr15	-	1089	12	FSM	ENSMUSG00000022403.16	ENSMUST00000023039.15	1089	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	740.766712477045	2982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAAGCCCTTGCTGAAT	NA	False	NA	NA	False	AGTAAA	-31	NA	81283795	81249650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273898_81276465_81276524_81283685
ENSMUST00000023040.9	chr15	-	1724	9	FSM	ENSMUSG00000022404.9	ENSMUST00000023040.9	1724	9	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_6	19.7638400873919	2027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAAGTTGCTCTTGATT	6848	False	NA	-10	True	AATAAA	-27	NA	81245013	81203111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
ENSMUST00000023048.12	chr15	+	5148	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2753	False	NA	16	True	AATAAA	-18	NA	80118218	80137572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ENSMUST00000023050.9	chr15	+	2964	11	FSM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	7.29109045342327	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCATCTTGTCTATCTG	4993	False	NA	15	True	AGTAAA	-1	NA	80017327	80045908	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_80017390_80032427_80032565_80032887_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ENSMUST00000023055.8	chr15	-	1472	4	FSM	ENSMUSG00000022420.17	ENSMUST00000023055.8	1472	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	38.6091526281874	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTGTGGTGTATTGA	243	False	NA	NA	False	ATTAAA	-17	NA	79658668	79645653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79646727_79647710_79647795_79649016_79649223_79658559
ENSMUST00000023062.5	chr15	+	1569	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_3	55.9305124437656	7547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTGTTTTTATTGGTG	8178	False	NA	NA	False	AATAGA	-12	NA	79555061	79557601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
ENSMUST00000023064.9	chr15	+	1147	5	FSM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	15.1224171348366	820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGTGTAGCAAAAATAG	9559	False	NA	NA	False	ATTAAA	-14	NA	79543399	79551861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_79543495_79545571_79545726_79549846_79549953_79550031_79550151_79551188
ENSMUST00000023065.8	chr15	-	2219	14	FSM	ENSMUSG00000022429.12	ENSMUST00000023065.8	2219	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	20.9451241307391	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGATTCTGCATTCA	NA	False	NA	NA	False	AGTAAA	-16	NA	79489309	79445697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79469869_79469962_79472951_79473025_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
ENSMUST00000023068.8	chr15	-	4047	25	FSM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_19	18.7071269098764	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTACTCTGGTCTTGT	NA	False	NA	-6	True	TATAAA	-17	NA	85016165	84948889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ENSMUST00000023069.9	chr15	+	2518	9	FSM	ENSMUSG00000022434.9	ENSMUST00000023069.9	2518	9	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	15.0742951742362	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTTTTTC	NA	False	NA	8	True	AATAAA	-15	NA	84921289	84947031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
ENSMUST00000023085.7	chr15	-	590	3	FSM	ENSMUSG00000022450.7	ENSMUST00000023085.7	590	3	0	0	0	0	multi-exon	FALSE	canonical	3	3916	junction_1	175	19495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTCTCTCTTACTT	6212	False	NA	-13	True	GATAAA	-21	NA	82238523	82234340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_82234573_82235179_82235296_82238281
ENSMUST00000023086.15	chr15	+	705	3	FSM	ENSMUSG00000022452.17	ENSMUST00000023086.15	705	3	0	0	0	0	multi-exon	FALSE	canonical	3	1353	junction_2	125	4138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGCTTGGTTGCACTTT	NA	False	NA	61	True	AATAAA	-43	NA	82230154	82233291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_82230471_82232100_82232242_82233043
ENSMUST00000023087.13	chr15	-	3025	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_8	20.6333316505115	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTGTATGTTGGCTT	NA	False	NA	-12	True	AATAAA	-12	NA	94487760	94475831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ENSMUST00000023088.8	chr15	-	1913	10	FSM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_2	15.084944665313	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGGGTACTATGACCTG	1344	False	NA	0	True	AATAAA	-31	NA	82223027	82213732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
ENSMUST00000023089.5	chr15	+	1413	6	FSM	ENSMUSG00000022455.5	ENSMUST00000023089.5	1413	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	3.32264954516723	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCCTCCTGCCTTATT	2000	False	NA	NA	False	TTTAAA	-23	NA	82183154	82198824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_82183270_82189871_82189981_82190244_82190387_82190546_82190640_82192723_82192829_82197975
ENSMUST00000023099.8	chr15	-	4660	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_15	32.8196418153655	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTAGGATTTTTTGT	NA	False	NA	-8	True	AATAAA	-16	NA	96597611	96585272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
ENSMUST00000023101.10	chr15	-	3932	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	0	0	0	0	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	2982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTATGATCTTCTTT	NA	False	NA	-12	True	AATAAA	-16	NA	96953837	96892703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ENSMUST00000023104.7	chr15	-	2271	17	FSM	ENSMUSG00000022466.7	ENSMUST00000023104.7	2271	17	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_16	35.978292066189	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGTCGATATTTCATTT	NA	False	NA	-3	True	AATAAA	-25	NA	97603706	97572977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ENSMUST00000023112.12	chr15	-	1300	8	FSM	ENSMUSG00000022474.16	ENSMUST00000023112.12	1300	8	0	0	0	0	multi-exon	FALSE	canonical	3	940	junction_3	83.919543587405	5875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845131	81835308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ENSMUST00000023128.8	chr15	-	4382	30	FSM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_15	17.8822280065433	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCAGTCTGTCCTTCCAT	NA	False	NA	2	True	AATAAA	-28	NA	103275190	103252712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ENSMUST00000023143.14	chr16	-	2235	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTCCCCATTCATTCT	NA	False	NA	-11	True	AATAAA	-13	NA	10810985	10777138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
ENSMUST00000023146.5	chr16	+	2121	11	FSM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_1	76.2262422004391	645	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTTTGTCATTCTTTC	NA	False	NA	NA	False	AAGAAA	-25	NA	10229811	10242292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ENSMUST00000023157.6	chr16	-	2398	17	FSM	ENSMUSG00000022515.7	ENSMUST00000023157.6	2398	17	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_1	12.8608842522589	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGGGGGCTCATTTGT	8223	False	NA	-5	True	AATAAA	-13	NA	4782037	4759299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ENSMUST00000023159.10	chr16	+	3095	16	FSM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	0	0	0	0	multi-exon	TRUE	canonical	3	266	junction_15	54.4223810169636	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTATGTGTGCCTTTGTT	2924	False	NA	13	True	AATAAA	-14	NA	4704112	4756159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ENSMUST00000023171.8	chr16	+	1468	4	FSM	ENSMUSG00000022528.9	ENSMUST00000023171.8	1468	4	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_2	50.3388517946129	447	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAGAACTGATTATTT	NA	False	NA	16	True	AATAAA	-17	NA	29884157	29886614	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_29884517_29884648_29884745_29884980_29885069_29885689
ENSMUST00000023176.5	chr16	+	3241	6	FSM	ENSMUSG00000022529.12	ENSMUST00000023176.5	3241	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	57.158026557956	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATGAATATGTATAAAT	NA	False	NA	3	True	AATAAA	-12	NA	3561956	3568645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_3562632_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566575
ENSMUST00000023179.7	chr15	+	2772	5	FSM	ENSMUSG00000033669.9	ENSMUST00000023179.7	2772	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	13.4976849866931	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGCCTGTACTTTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	76763458	76776595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76763554_76764938_76764983_76765311_76765439_76772430_76772548_76774206
ENSMUST00000023189.15	chr16	-	3280	16	FSM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_6	221.604291976086	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8110	False	NA	-8	True	AATAAA	-13	NA	4867727	4831772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ENSMUST00000023191.17	chr16	-	1431	11	FSM	ENSMUSG00000022540.17	ENSMUST00000023191.17	1431	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	153.714052708267	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831391	4826593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829623_4830104_4830160_4830290_4830374_4831166_4831239_4831326
ENSMUST00000023206.14	chr16	+	3480	11	FSM	ENSMUSG00000022545.14	ENSMUST00000023206.14	3480	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	21.466252583998	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGTTTCTCAGTGTTT	NA	False	NA	11	True	AATAAA	-14	NA	12927547	12966598	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
ENSMUST00000023207.15	chr16	-	979	5	FSM	ENSMUSG00000022548.15	ENSMUST00000023207.15	979	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	27.2614654778499	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTTGCTAGCCCAATAAT	8710	False	NA	-38	True	NA	NA	NA	31133412	31115973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133216
ENSMUST00000023211.16	chr15	-	1734	9	FSM	ENSMUSG00000022552.17	ENSMUST00000023211.16	1734	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_7	14.1862609591111	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	8113	False	NA	-3	True	ATTAAA	-16	NA	76235311	76231239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234254_76234430_76234680
ENSMUST00000023212.15	chr15	+	1686	8	FSM	ENSMUSG00000022553.17	ENSMUST00000023212.15	1686	8	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_1	86.5157765487702	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	False	NA	24	True	AATAAA	-16	NA	76235505	76238573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76235860_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ENSMUST00000023217.11	chr15	-	2491	16	FSM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_11	43.9047453775405	1962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGCTGGCAGCAGAGT	NA	False	NA	-34	True	AATAAA	-20	NA	76361477	76337188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ENSMUST00000023219.9	chr15	-	1710	9	FSM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	0	0	0	0	multi-exon	TRUE	canonical	3	128	junction_8	22.8988946239769	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTATATGT	NA	False	NA	NA	False	AATAAA	-21	NA	76422935	76419920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116_76422276_76422524
ENSMUST00000023221.13	chr15	+	2107	12	FSM	ENSMUSG00000022561.14	ENSMUST00000023221.13	2107	12	0	0	0	0	multi-exon	TRUE	non_canonical	3	197	junction_6	31.5777932223483	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGCCCGCTGTCTTCT	4713	False	NA	24	True	AATAAA	-27	NA	76215430	76219107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUST00000023225.8	chr15	+	1725	7	FSM	ENSMUSG00000022564.8	ENSMUST00000023225.8	1725	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	10.0567832276971	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTGCTTCTCCTTGTCT	NA	False	NA	13	True	AATAAA	-14	NA	76130974	76134104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76131101_76132050_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
ENSMUST00000023231.7	chr15	-	1335	11	FSM	ENSMUSG00000022570.8	ENSMUST00000023231.7	1335	11	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_10	87.2147349935778	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGACTCAGAAGCTGGG	8919	False	NA	-29	True	AATAAA	-15	NA	75801602	75796531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
ENSMUST00000023235.13	chr15	-	824	7	FSM	ENSMUSG00000055762.17	ENSMUST00000023235.13	824	7	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_6	1073.10918984665	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGTGGTGGAGGATGA	NA	False	NA	NA	False	NA	NA	NA	75781178	75767652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773102_75781093
ENSMUST00000023237.8	chr15	-	1898	13	FSM	ENSMUSG00000022574.8	ENSMUST00000023237.8	1898	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	7.1351049201972	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTGTCGTTAGTTCAC	NA	False	NA	NA	False	CATAAA	-30	NA	75766330	75762804	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75762910_75762997_75763106_75763195_75763351_75763428_75763532_75763632_75763714_75763811_75763897_75764190_75764332_75764405_75764603_75764953_75765070_75765154_75765286_75765401_75765485_75765568_75765697_75765865
ENSMUST00000023238.6	chr15	+	1792	11	FSM	ENSMUSG00000022575.6	ENSMUST00000023238.6	1792	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	7.7614431647729	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTTGAGGGGTACTG	NA	False	NA	15	True	AATAAA	-20	NA	75734175	75739257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_75734331_75735253_75735478_75736092_75736286_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
ENSMUST00000023248.13	chr15	-	819	3	FSM	ENSMUSG00000075602.11	ENSMUST00000023248.13	819	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	8	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGTTCTCCATTTTTC	9905	False	NA	-4	True	AATAAA	-15	NA	74869483	74866726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_74867329_74868300_74868418_74869383
ENSMUST00000023260.5	chr15	-	513	3	FSM	ENSMUSG00000022595.8	ENSMUST00000023260.5	513	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1.5	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGTCTCGTTTCTGG	NA	False	NA	NA	False	AATACA	-19	NA	74606178	74604095	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_74604389_74604815_74604936_74606078
ENSMUST00000023269.5	chr16	+	677	6	FSM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	0	0	0	0	multi-exon	FALSE	canonical	3	9815	junction_1	1495.09793659145	131471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	55786637	55791798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791673
ENSMUST00000023283.6	chr15	-	2906	14	FSM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	66.7675469479281	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTGCGGTGTGGCGAG	NA	False	NA	NA	False	AATAAA	-19	NA	89239862	89235206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
ENSMUST00000023289.13	chr15	-	1707	11	FSM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_8	79.2225346729073	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1180	False	NA	NA	False	AATAAA	-23	NA	89314102	89310569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
ENSMUST00000023330.8	chr16	+	3045	27	FSM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	334.347850609362	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAGAAAACATTTCCTT	NA	False	NA	11	True	AATAAA	-16	NA	48251599	48451263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ENSMUST00000023351.11	chr16	-	1035	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_1	21	3756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGGAGTCCTGGTTT	NA	False	NA	-2	True	ATTAAA	-22	NA	15681211	15666304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_15666594_15680261_15680408_15680611
ENSMUST00000023353.4	chr16	-	3589	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	0	0	0	0	multi-exon	TRUE	canonical	3	1276	junction_6	130.715909088714	2554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAGTAGGCATTAATG	NA	False	NA	NA	False	AATAAA	-20	NA	15455264	15441760	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ENSMUST00000023357.14	chr16	-	1465	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_3	56.7384349449295	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTATGGTCATGGTCT	NA	False	NA	-4	True	NA	NA	NA	14135239	14117107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
ENSMUST00000023359.13	chr16	+	2287	9	FSM	ENSMUSG00000022678.17	ENSMUST00000023359.13	2287	9	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_8	30.8696857774743	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTGCATTGTATAT	NA	False	NA	96	True	AATAAA	-18	NA	13981138	14010792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ENSMUST00000023360.14	chr16	+	3087	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	44103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGAACTCTCAGCTCC	491	False	NA	NA	False	NA	NA	NA	13758528	13767242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
ENSMUST00000023362.15	chr16	+	1175	10	FSM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_1	69.8729004852541	2092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTAGATGACTTTTTAC	NA	False	NA	NA	False	AATAAA	-23	NA	13637114	13653315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ENSMUST00000023363.8	chr16	+	3582	18	FSM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	0	0	0	0	multi-exon	FALSE	canonical	3	873	junction_12	92.1558406284578	1546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACTGTGTTGAATTTTA	NA	False	NA	27	True	AATAAA	-20	NA	13598576	13632703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ENSMUST00000023365.13	chr16	+	3003	8	FSM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_1	10.7760126660835	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTATAGAGAAATCTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	13489721	13521476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
ENSMUST00000023387.14	chr16	-	2838	8	FSM	ENSMUSG00000022704.17	ENSMUST00000023387.14	2838	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	53.7818723727463	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710048	43681769	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43698319_43698397_43700661_43700718_43701355_43701577_43709929
ENSMUST00000023396.10	chr16	+	1842	9	FSM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	22.2528088114737	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTGTGGCCGAATCAT	NA	False	NA	17	True	AATAAA	-24	NA	8455537	8475395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ENSMUST00000023405.16	chr16	-	1696	8	FSM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	9.94064014692275	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATTTTTATCCTTAACA	NA	False	NA	NA	False	AATAAA	-21	NA	59459530	59433311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_59434208_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
ENSMUST00000023407.12	chr16	+	2159	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGCCGGTATATACATG	NA	False	NA	-44	True	NA	NA	NA	59292137	59312824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
ENSMUST00000023426.12	chr16	+	2147	5	FSM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	33.101170674162	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTGAGATCACAACATG	NA	False	NA	24	True	AATAAA	-31	NA	58548272	58554614	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_58548448_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ENSMUST00000023431.8	chr16	-	3690	18	FSM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	0	0	0	0	multi-exon	TRUE	canonical	3	134	junction_12	18.4520326427881	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	-4	True	AATAAA	-22	NA	57051867	56989224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ENSMUST00000023432.10	chr16	-	1286	10	FSM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	0	0	0	0	multi-exon	TRUE	canonical	3	674	junction_8	39.9499687108764	2511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGATGTTTTTCTTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	56987695	56977027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
ENSMUST00000023444.11	chr16	+	3394	21	FSM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	0	0	0	0	multi-exon	FALSE	canonical	2	77	junction_5	14.8690113995518	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCCGAGTCTTCT	NA	False	NA	32	True	NA	NA	NA	17326551	17344197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ENSMUST00000023449.11	chr16	+	3447	5	FSM	ENSMUSG00000022765.11	ENSMUST00000023449.11	3447	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	7.59522876548166	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTGACTAAGCCCCT	1384	False	NA	NA	False	AGTAAA	-15	NA	17223849	17248691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_17224224_17237127_17237325_17240329_17240416_17244900_17245006_17246006
ENSMUST00000023453.10	chr16	-	1108	3	FSM	ENSMUSG00000022769.10	ENSMUST00000023453.10	1108	3	0	0	0	0	multi-exon	FALSE	canonical	2	125	junction_1	37.5	444	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGTGCATGAGATGTG	NA	False	NA	-10	True	AATAAA	-18	NA	16950247	16948001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16948653_16949460_16949658_16949987
ENSMUST00000023455.14	chr16	-	2333	21	FSM	ENSMUSG00000022771.18	ENSMUST00000023455.14	2333	21	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	124.441592725262	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCGTTCATGACCTGGTA	NA	False	NA	NA	False	AATAAA	-19	NA	16929121	16904418	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ENSMUST00000023460.7	chr16	+	2070	4	FSM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	12.2565175405668	2868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTCTATTTCCTCGC	NA	False	NA	4	True	AATAAA	-15	NA	31767330	31777290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_31767546_31772942_31773125_31775108_31775248_31775756
ENSMUST00000023465.16	chr16	+	3073	18	FSM	ENSMUSG00000022779.17	ENSMUST00000023465.16	3073	18	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	94.325542449951	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688644	16710854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_16688920_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ENSMUST00000023474.4	chr16	+	1394	3	FSM	ENSMUSG00000022787.11	ENSMUST00000023474.4	1394	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	52	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAATTTTGGTTTTTTTT	NA	False	NA	18	True	AATAAA	-19	NA	32066070	32075901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32066344_32070640_32071137_32075276
ENSMUST00000023477.15	chr16	-	3951	18	FSM	ENSMUSG00000022789.16	ENSMUST00000023477.15	3951	18	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_4	261.707977990631	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTTCTGATGTGCTTC	NA	False	NA	-7	True	AATAAA	-29	NA	16176823	16130093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUST00000023486.15	chr16	+	4890	19	FSM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_9	25.3592094942417	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCGGACTCATTTCATA	7957	False	NA	18	True	AATAAA	-19	NA	32427737	32451612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ENSMUST00000023510.7	chr16	-	3484	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	3061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGTCTCCTGCCTCT	8640	False	NA	NA	False	NA	NA	NA	33787408	33775151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ENSMUST00000023524.13	chr16	+	2031	8	FSM	ENSMUSG00000022827.15	ENSMUST00000023524.13	2031	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	11.0896163971859	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTCATTTCTTTTAA	NA	False	NA	NA	False	ATTAAA	-20	NA	37360246	37392747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_37360323_37362208_37362301_37377182_37377313_37380356_37380472_37383977_37384129_37387681_37387754_37390749_37390789_37391391
ENSMUST00000023525.9	chr16	-	3084	5	FSM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_4	13.7204227340122	628	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGTTATACTCACTAA	NA	False	NA	NA	False	AATAAA	-36	NA	37360151	37330151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37360014
ENSMUST00000023532.7	chr16	+	4107	13	FSM	ENSMUSG00000022833.8	ENSMUST00000023532.7	4107	13	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_6	18.9487613198213	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGTGAATTTGTTTACT	NA	False	NA	7	True	AATATA	-16	NA	34510985	34545564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ENSMUST00000023535.4	chr16	+	2257	15	FSM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_14	52.2779073016196	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTGTCATGTTATT	NA	False	NA	44	True	AATAAA	-11	NA	36648769	36693075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
ENSMUST00000023550.9	chr16	-	1809	17	FSM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_7	56.9566378374812	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGTAGAGTATGTTT	NA	False	NA	-10	True	AATAAA	-14	NA	35311243	35217681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
ENSMUST00000023559.7	chr16	-	2981	7	FSM	ENSMUSG00000022853.8	ENSMUST00000023559.7	2981	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	3.35410196624968	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATTGTGTAAAAAACTG	NA	False	NA	NA	False	AATAAA	-19	NA	21606557	21580036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_21582087_21584975_21585318_21589165_21589271_21592244_21592357_21594094_21594262_21596548_21596653_21606456
ENSMUST00000023562.9	chr16	-	1360	5	FSM	ENSMUSG00000022856.10	ENSMUST00000023562.9	1360	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	14.1244468918255	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCAGGTTCTGAATGT	9190	False	NA	-2	True	ATTAAA	-16	NA	21766302	21753075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21764750_21764905_21766117
ENSMUST00000023572.15	chr16	+	5742	7	FSM	ENSMUSG00000022865.15	ENSMUST00000023572.15	5742	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	8.97527467855751	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGGTGTGGCTTTATT	NA	False	NA	20	True	AATAAA	-21	NA	78098383	78137648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075
ENSMUST00000023587.12	chr16	+	1544	8	FSM	ENSMUSG00000022871.14	ENSMUST00000023587.12	1544	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	202.97702694982	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGCTTCAACCTG	NA	False	NA	9	True	AATAAA	-15	NA	22738986	22758502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22739246_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ENSMUST00000023598.15	chr16	-	1228	11	FSM	ENSMUSG00000022881.16	ENSMUST00000023598.15	1228	11	0	0	0	0	multi-exon	FALSE	canonical	2	1237	junction_10	165.436271718145	4858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATATACAATTTTATTTA	NA	False	NA	-26	True	AATAAA	-23	NA	22946487	22932692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ENSMUST00000023599.13	chr16	+	2208	11	FSM	ENSMUSG00000022884.17	ENSMUST00000023599.13	2208	11	0	0	0	0	multi-exon	FALSE	canonical	3	1278	junction_10	308.304135554488	8092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	5739	False	NA	NA	False	AATAAA	-18	NA	22926193	22932697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ENSMUST00000023617.13	chr16	+	3042	8	FSM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	99.4786409235671	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAGAAAAAAAAAAAAAA	NA	False	NA	69	True	NA	NA	NA	36514339	36547166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_36514577_36528611_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ENSMUST00000023622.13	chr16	+	2973	10	FSM	ENSMUSG00000022906.16	ENSMUST00000023622.13	2973	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.187830400713	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGTGAATCGTGAATG	NA	False	NA	13	True	AATAAA	-19	NA	35759380	35792975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_35759431_35761402_35761506_35767870_35768725_35773932_35774149_35777176_35777396_35780373_35780432_35784344_35784735_35788019_35788157_35789960_35790136_35792204
ENSMUST00000023629.9	chr16	+	3303	15	FSM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_5	24.011476847711	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGCAATTTCTTTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	62674669	62749709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
ENSMUST00000023630.16	chr16	-	1044	7	FSM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	0	0	0	0	multi-exon	FALSE	canonical	3	1101	junction_3	73.0062782688357	2190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAACTTTATTTTCTTAA	NA	False	NA	-10	True	AATAAA	-16	NA	95792160	95781132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_95781312_95783301_95783439_95784992_95785192_95788492_95788556_95789159_95789312_95790691_95790799_95791953
ENSMUST00000023666.11	chr16	+	1922	14	FSM	ENSMUSG00000022945.13	ENSMUST00000023666.11	1922	14	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_1	52.2487224157954	2171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4366	False	NA	21	True	AATAAA	-29	NA	93680788	93703003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ENSMUST00000023669.14	chr16	-	1816	12	FSM	ENSMUSG00000022948.17	ENSMUST00000023669.14	1816	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	42.1206452981264	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGTCTTAGTCG	NA	False	NA	-1	True	AATAAA	-21	NA	93400691	93380344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400024_93400099_93400453
ENSMUST00000023672.10	chr16	-	2190	4	FSM	ENSMUSG00000022951.17	ENSMUST00000023672.10	2190	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	123.764112551077	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACGTTGTTGGTCGTTTT	NA	False	NA	-5	True	AATAAA	-22	NA	92196965	92188842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92196783
ENSMUST00000023677.10	chr16	-	838	7	FSM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	0	0	0	0	multi-exon	FALSE	canonical	3	5653	junction_6	394.832348387684	14526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGGAGCCTTGTCCTTT	811	False	NA	-1	True	AATAAA	-20	NA	91728575	91722101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727293_91728407
ENSMUST00000023684.14	chr16	-	3518	22	FSM	ENSMUSG00000022962.16	ENSMUST00000023684.14	3518	22	0	0	0	0	multi-exon	FALSE	canonical	3	1247	junction_21	231.829967404665	1999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTGAGGGCACTTAGAG	NA	False	NA	NA	False	NA	NA	NA	91443840	91418073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ENSMUST00000023686.15	chr16	-	2347	7	FSM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	6.43989302878722	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGAATCTGAGTCTTTT	NA	False	NA	-6	True	AATAAA	-24	NA	91394688	91371390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
ENSMUST00000023689.11	chr16	+	3909	11	FSM	ENSMUSG00000022967.14	ENSMUST00000023689.11	3909	11	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	11.4908659377786	1054	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATATTTTCTTTATTTA	NA	False	NA	24	True	NA	NA	NA	91282125	91304329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_91282305_91286583_91286708_91289518_91289698_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
ENSMUST00000023691.12	chr16	+	1850	7	FSM	ENSMUSG00000022969.14	ENSMUST00000023691.12	1850	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1.63299316185545	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGGTTTGTTCTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	91203122	91222722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_91203261_91204505_91204630_91208770_91208929_91211500_91211668_91216219_91216368_91218620_91218779_91221765
ENSMUST00000023707.11	chr16	+	641	5	FSM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	320.427351360648	12636	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTGTGACTCCTTTG	NA	False	NA	19	True	ATTAAA	-18	NA	90017641	90023217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_90017818_90019667_90019765_90021243_90021314_90022032_90022151_90023037
ENSMUST00000023736.10	chr15	-	2304	17	FSM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_9	10.4395581803063	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTGTCCCTGTGTCTAT	NA	False	NA	-3	True	AATAAA	-35	NA	98816112	98801797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805417_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
ENSMUST00000023749.15	chr15	+	2452	10	FSM	ENSMUSG00000023010.16	ENSMUST00000023749.15	2452	10	0	0	0	0	multi-exon	FALSE	canonical	3	1506	junction_9	135.383406171756	3068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTCTCAGTGTTAAAT	NA	False	NA	15	True	AATAAA	-20	NA	99290762	99307930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUST00000023756.12	chr15	-	2933	17	FSM	ENSMUSG00000023015.15	ENSMUST00000023756.12	2933	17	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_16	66.1194172974173	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATGTTGGTTTTCTTGT	NA	False	NA	-1	True	AATAAA	-19	NA	99549537	99518377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ENSMUST00000023762.13	chr15	-	2096	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670482	99633472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ENSMUST00000023769.11	chr15	+	2365	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	32.1334024895521	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTTTTCGGAATGCAAA	NA	False	NA	13	True	ATTAAA	-16	NA	100125699	100159125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ENSMUST00000023774.12	chr15	-	3025	17	FSM	ENSMUSG00000023030.17	ENSMUST00000023774.12	3025	17	0	0	0	0	multi-exon	FALSE	canonical	1	67	junction_1	39.2515923243886	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTAGGGGTGCGA	NA	False	NA	NA	False	AATAAA	-22	NA	100320936	100285778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ENSMUST00000023779.8	chr15	+	2477	7	FSM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	46.5895195653844	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTTTTTTTCTGTTT	NA	False	NA	19	True	AATAAA	-21	NA	101164726	101172676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_101164853_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ENSMUST00000023803.8	chr15	+	1437	7	FSM	ENSMUSG00000023043.8	ENSMUST00000023803.8	1437	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	6.13731754650732	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCTTCCTTGGCAG	NA	False	NA	12	True	AATAAA	-24	NA	101936614	101940462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_101937110_101937900_101937984_101938257_101938415_101939053_101939219_101939329_101939456_101939730_101939955_101940275
ENSMUST00000023805.3	chr15	-	2279	15	FSM	ENSMUSG00000023044.3	ENSMUST00000023805.3	2279	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_14	14.588400480225	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGGTATGTTTTAAAG	2729	False	NA	NA	False	AATAAA	-17	NA	102097493	102085433	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321
ENSMUST00000023810.12	chr15	+	1224	5	FSM	ENSMUSG00000023048.14	ENSMUST00000023810.12	1224	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	259.364969685576	1724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTAGTTTTGTTACTC	2378	False	NA	40	True	AATAAA	-43	NA	102367609	102371241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102367691_102367898_102368017_102368542_102368582_102368804_102369155_102370605
ENSMUST00000023813.9	chr15	+	1523	9	FSM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_3	28.7706447616316	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102426893	102432111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ENSMUST00000023826.5	chr14	-	852	5	FSM	ENSMUSG00000023064.5	ENSMUST00000023826.5	852	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	6.72681202353685	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCTTCTTCTTTGTGC	5954	False	NA	NA	False	AATAAA	-19	NA	34096746	34092230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_34092523_34092813_34092874_34095212_34095341_34095627_34095670_34096416
ENSMUST00000023829.8	chr17	+	1913	3	FSM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	0	0	0	0	multi-exon	FALSE	canonical	3	1159	junction_2	73.5	4529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	4647	False	NA	24	True	NA	NA	NA	29312742	29319696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29312836_29317370_29317812_29318317
ENSMUST00000023836.4	chrX	-	1763	6	FSM	ENSMUSG00000023074.12	ENSMUST00000023836.4	1763	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.7804182083788	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGCCCCCT	NA	False	NA	NA	False	AATAAA	-7	NA	52459379	52433897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_52434867_52436580_52436743_52444529_52444751_52446286_52446363_52446450_52446705_52459298
ENSMUST00000023854.10	chrX	+	2356	7	FSM	ENSMUSG00000023092.17	ENSMUST00000023854.10	2356	7	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	4.78423336480244	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCCTGTCTTTTTATTC	NA	False	NA	12	True	AATAAA	-18	NA	55777146	55838706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
ENSMUST00000023856.9	chr2	+	1196	5	FSM	ENSMUSG00000023094.15	ENSMUST00000023856.9	1196	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	15.0996688705415	450	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTCTCAGTCTGT	4784	False	NA	19	True	AATAAA	-20	NA	19376446	19399787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_19376591_19382972_19383074_19388051_19388129_19398018_19398167_19399061
ENSMUST00000023869.15	chr5	+	2339	8	FSM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	0	0	0	0	multi-exon	FALSE	canonical	3	1477	junction_4	100.760982082372	3888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCGCTAACTGAATTTG	8978	False	NA	NA	False	AATGAA	-2	NA	124045237	124066898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ENSMUST00000023913.11	chr16	+	2495	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	29.2350389088163	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGAAAGCGTGCTTC	NA	False	NA	30	True	AATAAA	-24	NA	95946606	95959052	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
ENSMUST00000023918.13	chr1	+	3511	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	0	0	0	0	multi-exon	TRUE	canonical	3	1145	junction_2	98.7764172879585	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTGTGGGATTTAATGT	NA	False	NA	17	True	ATTAAA	-21	NA	151220227	151240173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUST00000023924.4	chr14	-	2401	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	967	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTATATACCTT	NA	False	NA	-15	True	NA	NA	NA	14389406	14377938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ENSMUST00000023952.10	chr15	-	1958	9	FSM	ENSMUSG00000049382.11	ENSMUST00000023952.10	1958	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_8	4.93552175559991	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATGCATTCGTGTAGGT	5892	False	NA	6	True	AATAAA	-32	NA	101912917	101905132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
ENSMUST00000023994.10	chr2	-	1768	8	FSM	ENSMUSG00000023224.13	ENSMUST00000023994.10	1768	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	34.9080424626107	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCAGACATTTTCTTCT	NA	False	NA	-26	True	AATAAA	-1	NA	84605748	84595730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083_84605159_84605706
ENSMUST00000024004.9	chr8	+	1058	6	FSM	ENSMUSG00000023235.15	ENSMUST00000024004.9	1058	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5.67097875150313	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTCTAGTGTGCAGTA	7913	False	NA	NA	False	AATAAA	-35	NA	4399587	4410020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_4399656_4399771_4399895_4403882_4404001_4404090_4404204_4407592_4407690_4409481
ENSMUST00000024011.10	chr14	-	3392	5	FSM	ENSMUSG00000023243.10	ENSMUST00000024011.10	3392	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	12.5573683548744	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGTATGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	20231877	20190124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_20192526_20194702_20194872_20195023_20195191_20196568_20196681_20231334
ENSMUST00000024031.13	chr9	-	1529	15	FSM	ENSMUSG00000023262.14	ENSMUST00000024031.13	1529	15	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_14	78.143510052117	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGGACAGTCATGGAA	NA	False	NA	-7	True	AATAAA	-27	NA	106315518	106310179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314937_106315331
ENSMUST00000024042.5	chr15	+	1366	10	FSM	ENSMUSG00000023272.5	ENSMUST00000024042.5	1366	10	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	99.7619388566824	869	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGACGTGTTGGTTTGTTT	NA	False	NA	17	True	AATAAA	-26	NA	88703848	88710886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
ENSMUST00000024047.12	chr9	+	1596	9	FSM	ENSMUSG00000023277.14	ENSMUST00000024047.12	1596	9	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_8	33.0111250186963	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGCCTGGGTGCCTTT	NA	False	NA	19	True	AATAAA	-16	NA	106080306	106092588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ENSMUST00000024112.8	chr16	+	2417	14	FSM	ENSMUSG00000023341.16	ENSMUST00000024112.8	2417	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	1.68530017693897	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCACTTTGAATTGGGGG	NA	False	NA	NA	False	AATAAA	-13	NA	97337282	97362099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_97337374_97339817_97339930_97345667_97345861_97346811_97346950_97347524_97347680_97347946_97348086_97348537_97348737_97352096_97352176_97352595_97352719_97353123_97353264_97357158_97357320_97357801_97357879_97359719_97359969_97361538
ENSMUST00000024171.14	chr6	+	3237	24	FSM	ENSMUSG00000023403.15	ENSMUST00000024171.14	3237	24	0	0	0	0	multi-exon	TRUE	canonical	2	108	junction_8	52.5929548855327	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATTCATATTCTTT	173	False	NA	NA	False	AATAAA	-22	NA	49372537	49446435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ENSMUST00000024338.5	chr4	+	1315	8	FSM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	2.37332110369088	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGCACTCTGCTTAT	NA	False	NA	10	True	AATAAA	-24	NA	156046774	156051086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_156047195_156048999_156049117_156049224_156049346_156049436_156049589_156050050_156050160_156050322_156050414_156050538_156050618_156050860
ENSMUST00000024470.13	chr5	+	1596	7	FSM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_5	17.423642940939	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTTTGCTATTATTTAA	NA	False	NA	12	True	TATAAA	-17	NA	124250359	124253546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450_124252709_124252777
ENSMUST00000024486.14	chr11	+	1332	5	FSM	ENSMUSG00000023723.18	ENSMUST00000024486.14	1332	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	23.6999472573253	2260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTCTATTTGTGGG	NA	False	NA	19	True	AATAAA	-19	NA	88095213	88102333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_88095312_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ENSMUST00000024570.6	chr17	-	2033	16	FSM	ENSMUSG00000015659.13	ENSMUST00000024570.6	2033	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_12	20.0614611188274	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTCCATCTGTTGTTA	2607	False	NA	-19	True	AATATA	-15	NA	6130002	6094340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ENSMUST00000024572.10	chr17	-	1614	8	FSM	ENSMUSG00000023806.11	ENSMUST00000024572.10	1614	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	24.1119836409624	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCGTTCAAGGGCCATG	NA	False	NA	NA	False	NA	NA	NA	7215755	7172114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_7172520_7172831_7172919_7175430_7175594_7177506_7177711_7178676_7178823_7181355_7181498_7209067_7209156_7215376
ENSMUST00000024594.9	chr17	+	1915	9	FSM	ENSMUSG00000023827.9	ENSMUST00000024594.9	1915	9	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_3	26.473748790075	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCAAGTGTTTACACAA	NA	False	NA	28	True	ATTAAA	-19	NA	12338170	12438532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ENSMUST00000024636.15	chr17	+	3077	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_6	38.250587420542	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTACAGTGTTGGTTTT	NA	False	NA	30	True	ATTAAA	-22	NA	8384371	8415307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ENSMUST00000024657.12	chr17	-	1663	12	FSM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_1	72.874056420468	451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGATGACCTTAAACATCA	NA	False	NA	-19	True	AATAAA	-16	NA	15181535	15165270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ENSMUST00000024697.5	chr17	+	946	3	FSM	ENSMUSG00000023904.11	ENSMUST00000024697.5	946	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	200.5	1900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCAGCAGCCTTTGG	NA	False	NA	11	True	AATAAA	-19	NA	23892581	23894201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_23893043_23893508_23893650_23893857
ENSMUST00000024699.4	chr17	+	1622	3	FSM	ENSMUSG00000023906.4	ENSMUST00000024699.4	1622	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGATGTCTCTTGGT	NA	False	NA	9	True	AATAAA	-23	NA	23898222	23901420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_23898382_23898731_23898796_23900021
ENSMUST00000024701.9	chr17	+	2040	8	FSM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	0	0	0	0	multi-exon	TRUE	canonical	3	384	junction_2	52.6761379583211	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATAGCTCTTCTTGTCCCT	2938	False	NA	29	True	AATAAA	-43	NA	23945309	23955704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ENSMUST00000024727.10	chr17	-	3027	16	FSM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	0	0	0	0	multi-exon	FALSE	canonical	3	561	junction_9	75.0022221893014	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAGCCTTTTGTTTGAA	2184	False	NA	-2	True	AATAAA	-20	NA	45744663	45702809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ENSMUST00000024731.9	chr17	-	1160	8	FSM	ENSMUSG00000023935.11	ENSMUST00000024731.9	1160	8	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_7	6.20730313782869	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGCCTCTCCCATGGTA	NA	False	NA	NA	False	TATAAA	-21	NA	45785864	45759862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45760118_45760360_45760477_45763603_45763667_45765016_45765138_45768083_45768246_45772087_45772237_45775352_45775507_45785724
ENSMUST00000024733.9	chr17	+	3349	22	FSM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_8	22.4045468336421	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTT	NA	False	NA	19	True	AATACA	-33	NA	45817766	45831769	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ENSMUST00000024734.8	chr17	+	645	3	FSM	ENSMUSG00000023939.8	ENSMUST00000024734.8	645	3	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_1	143	5065	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGAGCTGTGATCG	NA	False	NA	37	True	AATAAA	-26	NA	45997247	46009421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_45997354_46006407_46006499_46008973
ENSMUST00000024739.14	chr17	-	2520	11	FSM	ENSMUSG00000023944.15	ENSMUST00000024739.14	2520	11	0	0	0	0	multi-exon	FALSE	canonical	3	9221	junction_4	988.252604347694	129439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45884197	45878700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ENSMUST00000024749.9	chr17	-	3238	11	FSM	ENSMUSG00000023953.10	ENSMUST00000024749.9	3238	11	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_7	5.44426303552648	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCTTGCATACTTTT	7123	False	NA	-12	True	AATAAA	-15	NA	46513571	46482280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46505127_46505343_46509559_46509695_46510317_46510461_46513322
ENSMUST00000024756.5	chr17	+	2534	4	FSM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	7.40870359029762	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATAGTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	44389735	44397450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_44389874_44391537_44392402_44393634_44393812_44396095
ENSMUST00000024757.14	chr17	-	4560	4	FSM	ENSMUSG00000023961.17	ENSMUST00000024757.14	4560	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	10.2740233382816	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGCCTTCTTAATTTG	NA	False	NA	NA	False	AATAAA	-17	NA	44416700	44407198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416539
ENSMUST00000024762.3	chr17	-	966	5	FSM	ENSMUSG00000023966.9	ENSMUST00000024762.3	966	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.22474487139159	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTCTTGATTGTTGT	NA	False	NA	NA	False	CATAAA	-21	NA	46455142	46440196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46440425_46445898_46446046_46447667_46447798_46452472_46452639_46454847
ENSMUST00000024763.10	chr17	+	884	6	FSM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	0	0	0	0	multi-exon	FALSE	canonical	3	1040	junction_5	46.4732180938656	4594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTCAGTGCTTAGAA	NA	False	NA	19	True	AATAAA	-19	NA	46421911	46439836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568_46436639_46439430
ENSMUST00000024766.7	chr17	-	1195	7	FSM	ENSMUSG00000023971.10	ENSMUST00000024766.7	1195	7	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_2	28.055995596109	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGGG	NA	False	NA	NA	False	NA	NA	NA	46985181	46978383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ENSMUST00000024778.3	chr17	+	2054	4	FSM	ENSMUSG00000092558.4	ENSMUST00000024778.3	2054	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	32.2937902527543	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGTAGTTGCCTTCTT	NA	False	NA	NA	False	CATAAA	-16	NA	47922506	47935343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_47922618_47923887_47924043_47929733_47929988_47933809
ENSMUST00000024782.12	chr17	+	1388	9	FSM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	162.479181358721	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCTGTTGAGTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	48037766	48045407	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_48037890_48039666_48039827_48040176_48040295_48041018_48041138_48041523_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
ENSMUST00000024794.12	chr17	-	956	5	FSM	ENSMUSG00000023995.13	ENSMUST00000024794.12	956	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	2.06155281280883	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCTGGTGTAAGGTGGA	NA	False	NA	-1	True	AATAAA	-19	NA	48758550	48755462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_48755829_48756047_48756190_48756910_48757099_48757899_48758090_48758480
ENSMUST00000024797.16	chr17	+	2646	11	FSM	ENSMUSG00000064120.15	ENSMUST00000024797.16	2646	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	7.06328535456412	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTGGGGACTCTTGT	NA	False	NA	6	True	AATAAA	-22	NA	49735391	49762460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_49735593_49740197_49740325_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49759822_49759886_49761057
ENSMUST00000024802.10	chr17	-	1462	4	FSM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	0	0	0	0	multi-exon	FALSE	canonical	3	1356	junction_1	125.889722464633	6505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCGGCCTTTTCTCTTTT	9689	False	NA	1	True	NA	NA	NA	29483160	29469776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_29470700_29471223_29471293_29480710_29480866_29482845
ENSMUST00000024823.14	chr17	-	2024	7	FSM	ENSMUSG00000024026.14	ENSMUST00000024823.14	2024	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	1513.88137103128	5007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGGCAGCAAGTCCCT	NA	False	NA	-12	True	AATAAA	-24	NA	30831586	30811834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822360_30822492_30822993_30823077_30831441
ENSMUST00000024832.9	chr17	-	1191	9	FSM	ENSMUSG00000024033.11	ENSMUST00000024832.9	1191	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_8	7.5	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTCTGATGTCGCTTC	NA	False	NA	-1	True	AATAAA	-26	NA	31496357	31473992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_31474194_31477071_31477201_31477761_31477922_31480728_31480801_31484787_31484924_31485316_31485408_31492290_31492397_31492498_31492613_31496175
ENSMUST00000024851.10	chr17	-	2201	17	FSM	ENSMUSG00000024056.11	ENSMUST00000024851.10	2201	17	0	0	0	0	multi-exon	TRUE	canonical	3	248	junction_10	48.8427003246135	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCCCCTCCCATTTCTG	NA	False	NA	-11	True	AATAAA	-19	NA	71833852	71803094	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_71803349_71806261_71806365_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387_71819495_71821183_71821278_71824538_71824629_71825732_71825836_71827754_71827928_71828022_71828147_71830576_71830655_71832627_71832738_71833705
ENSMUST00000024870.9	chr17	+	2148	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_5	21.3572043468894	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCATTTACAATCGTAGTA	NA	False	NA	NA	False	AATAAA	-23	NA	74702602	74731216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ENSMUST00000024882.8	chr17	+	2838	20	FSM	ENSMUSG00000024078.8	ENSMUST00000024882.8	2838	20	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_5	16.0728948897983	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGTGATGTTCTCA	NA	False	NA	10	True	AATAAA	-21	NA	75024726	75170565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
ENSMUST00000024885.10	chr17	-	4070	16	FSM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_13	57.736720454914	2682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGTGTCTATTAGCAT	NA	False	NA	-3	True	ATTAAA	-40	NA	79244495	79226434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ENSMUST00000024887.6	chr17	+	1749	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_6	40.441391826191	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTGTCTCCTTATCAA	NA	False	NA	NA	False	AGTAAA	-12	NA	79244564	79254928	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
ENSMUST00000024889.14	chr17	-	4345	8	FSM	ENSMUSG00000024083.17	ENSMUST00000024889.14	4345	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	43.6142646577086	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATTGTGTGACCCTAT	NA	False	NA	-4	True	AATAAA	-29	NA	64620026	64588000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64615616_64616662_64618165_64618367_64619995
ENSMUST00000024909.15	chr17	-	927	9	FSM	ENSMUSG00000024099.16	ENSMUST00000024909.15	927	9	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_8	1803.30633403618	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAGCTTTATTCGGTTT	5516	False	NA	-11	True	AATAAA	-15	NA	66408490	66386435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66407972_66408070_66408409
ENSMUST00000024930.8	chr17	-	2166	10	FSM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_7	23.2426810463471	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCGGGCAGTGGTGGTGC	3337	False	NA	NA	False	NA	NA	NA	24439764	24434027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
ENSMUST00000024932.12	chr17	-	1183	3	FSM	ENSMUSG00000024121.14	ENSMUST00000024932.12	1183	3	0	0	0	0	multi-exon	FALSE	canonical	3	1416	junction_2	838.5	12601	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTGTGTTCTGGCGC	NA	False	NA	NA	False	AATAAA	-15	NA	24388435	24382839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24383583_24383672_24383857_24388179
ENSMUST00000024946.7	chr17	+	1086	7	FSM	ENSMUSG00000024132.7	ENSMUST00000024946.7	1086	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	202.517008887868	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTAGCTCTTGTGTTC	4882	False	NA	11	True	TATAAA	-24	NA	24645656	24658294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24645717_24645826_24645914_24652115_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ENSMUST00000024957.7	chr17	-	988	6	FSM	ENSMUSG00000024145.7	ENSMUST00000024957.7	988	6	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_5	28.3760462362183	1795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGTT	NA	False	NA	-12	True	AATAAA	-15	NA	87332834	87304683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_87304996_87316230_87316340_87327828_87327946_87329286_87329379_87331092_87331342_87332725
ENSMUST00000024959.10	chr17	+	1184	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_4	35.4427355039083	2890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTCTTCAATGAT	NA	False	NA	4	True	AATAAA	-14	NA	87332977	87343238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
ENSMUST00000024967.14	chr17	+	3283	16	FSM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	0	0	0	0	multi-exon	FALSE	canonical	3	1624	junction_8	132.693531618287	2715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4661	False	NA	19	True	AATAAA	-16	NA	87979757	88031141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ENSMUST00000024974.16	chr17	+	1101	9	FSM	ENSMUSG00000024158.18	ENSMUST00000024974.16	1101	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	126.378152779664	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTTATGGACTCTTT	NA	False	NA	11	True	AAAAAG	-24	NA	25069640	25083424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25069730_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
ENSMUST00000024976.5	chr17	+	1947	7	FSM	ENSMUSG00000024160.17	ENSMUST00000024976.5	1947	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	71.820957944043	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTCTATTGTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	25106138	25111123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25106563_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ENSMUST00000024978.7	chr17	+	715	5	FSM	ENSMUSG00000073435.11	ENSMUST00000024978.7	715	5	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	9.82344135219425	1217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAAAGTAGTGTTAAG	NA	False	NA	36	True	AATAAA	-35	NA	25115473	25116496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25115534_25115601_25115733_25115825_25115928_25116001_25116115_25116187
ENSMUST00000024981.9	chr17	-	2672	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	0	0	0	0	multi-exon	FALSE	canonical	3	1697	junction_3	70.6872513258225	2875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGCCAATATTTTTCT	4773	False	NA	-1	True	ATTAAA	-17	NA	25179663	25161443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ENSMUST00000024987.6	chr17	-	3434	21	FSM	ENSMUSG00000024170.16	ENSMUST00000024987.6	3434	21	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_20	19.5787512369916	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACAGGCTGCTTCTGTG	NA	False	NA	-8	True	AATAAA	-14	NA	25334879	25318550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334413
ENSMUST00000025007.7	chr17	-	1006	5	FSM	ENSMUSG00000024177.10	ENSMUST00000025007.7	1006	5	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	23.847169643377	2226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTACTTACTAGTTCTG	NA	False	NA	0	True	ATTAAA	-22	NA	26314576	26310707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26311127_26312590_26312704_26312832_26312935_26313110_26313245_26314338
ENSMUST00000025014.10	chr17	+	1068	5	FSM	ENSMUSG00000024181.10	ENSMUST00000025014.10	1068	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	613.108677152754	5349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342473	26345587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244
ENSMUST00000025023.15	chr17	+	1700	9	FSM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	74.6521098161331	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATATGTTTACATTAGTG	NA	False	NA	13	True	ATTAAA	-25	NA	26471869	26499693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ENSMUST00000025027.10	chr17	-	741	7	FSM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_6	250.570959122472	3612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9252	False	NA	-17	True	AATAAA	-18	NA	27158543	27156945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290_27158343_27158424
ENSMUST00000025040.6	chr6	-	390	1	FSM	ENSMUSG00000091845.2	ENSMUST00000025040.6	390	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	164858	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGTATTTTTTCTTT	NA	False	NA	-7	True	AATAAA	-27	NA	108117470	108117080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_108117100_108117500
ENSMUST00000025045.15	chr17	-	500	4	FSM	ENSMUSG00000024208.17	ENSMUST00000025045.15	500	4	0	0	0	0	multi-exon	TRUE	canonical	3	2713	junction_1	153.559977424675	12411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTGGAACTCATTCAT	1947	False	NA	2	True	AATAAA	-24	NA	27352890	27341636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27341815_27344120_27344191_27344857_27344933_27352713
ENSMUST00000025052.14	chr17	-	522	5	FSM	ENSMUSG00000052146.17	ENSMUST00000025052.14	522	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2686.58356467838	17343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCACTTGTGTATGTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	27854214	27849395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27849481_27851252_27851331_27853045_27853218_27853299_27853450_27854177
ENSMUST00000025057.5	chr17	-	1220	5	FSM	ENSMUSG00000024218.14	ENSMUST00000025057.5	1220	5	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	9.9373034571759	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACAGGGTTTCTCTGTGT	NA	False	NA	-9	True	AATAAA	-19	NA	28126698	28120101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
ENSMUST00000025077.7	chr18	+	2651	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGATAACAGTATTTCTA	-12	True	NA	17	True	AATAAA	-18	NA	4375591	4397330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUST00000025093.6	chr17	-	1833	10	FSM	ENSMUSG00000024246.10	ENSMUST00000025093.6	1833	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	16.3940669785982	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTGCTTATAGACTC	8164	False	NA	NA	False	ATTAAA	-22	NA	81372496	81333760	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
ENSMUST00000025095.9	chr17	-	1076	3	FSM	ENSMUSG00000024248.15	ENSMUST00000025095.9	1076	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	644	12028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTTTTGTTTT	9947	False	NA	-23	True	AATAAA	-23	NA	83821759	83809346	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_83810167_83811528_83811658_83821632
ENSMUST00000025101.10	chr17	+	1354	13	FSM	ENSMUSG00000024253.10	ENSMUST00000025101.10	1354	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_6	7.6412622575651	392	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATCTAAGTATAAATTTT	NA	False	NA	16	True	AATAAA	-24	NA	84933923	84963016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_84934005_84935712_84935831_84939063_84939099_84940946_84941017_84943659_84943749_84950299_84950487_84951532_84951602_84952146_84952225_84954672_84954750_84955073_84955145_84956643_84956742_84957136_84957230_84962728
ENSMUST00000025106.5	chr18	+	1015	4	FSM	ENSMUSG00000024258.5	ENSMUST00000025106.5	1015	4	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_1	16.2138486760204	3223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAATTGTATTTATTT	NA	False	NA	21	True	AATAAA	-20	NA	31922211	31929754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_31922298_31924892_31925074_31928340_31928437_31929102
ENSMUST00000025109.8	chr18	+	4015	21	FSM	ENSMUSG00000024260.15	ENSMUST00000025109.8	4015	21	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_13	29.4439722184355	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGAGCAGTTTGCCTCT	6817	False	NA	8	True	AATAAA	-20	NA	31767435	31856114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ENSMUST00000025142.13	chr18	-	4545	11	FSM	ENSMUSG00000024293.17	ENSMUST00000025142.13	4545	11	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	14.2393820090621	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCACTAGCTTGCAATT	2	True	NA	-6	True	ATTAAA	-21	NA	10610352	10566506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
ENSMUST00000025170.11	chr17	+	2229	15	FSM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_8	25.4498305996527	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTGGACCATCCTGTA	1979	False	NA	13	True	ATTAAA	-16	NA	34159633	34168671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34159781_34159858_34160066_34160165_34160247_34160379_34160493_34160606_34160695_34160795_34160858_34162319_34162425_34162531_34162683_34162774_34162911_34163455_34163556_34167193_34167508_34167616_34167712_34167809_34167906_34168046_34168161_34168251
ENSMUST00000025178.17	chr17	+	3383	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	0	0	0	0	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTGATTTTGTACTGT	NA	False	NA	31	True	NA	NA	NA	34174785	34186009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ENSMUST00000025181.18	chr17	-	1619	8	FSM	ENSMUSG00000061232.17	ENSMUST00000025181.18	1619	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	28.3196045170126	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATGATAGATGAATAAA	NA	False	NA	-40	True	NA	NA	NA	34219321	34215026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34215478_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ENSMUST00000025186.16	chr17	-	2320	7	FSM	ENSMUSG00000024327.17	ENSMUST00000025186.16	2320	7	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_6	39.6512575112344	1560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTTGTCTTTATGTG	NA	False	NA	-2	True	AATAAA	-26	NA	34250594	34247242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
ENSMUST00000025204.7	chr18	-	1109	4	FSM	ENSMUSG00000024346.7	ENSMUST00000025204.7	1109	4	0	0	0	0	multi-exon	FALSE	canonical	3	3024	junction_2	66.9792671072342	14116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTTGCCTTGCATTT	NA	False	NA	NA	False	NA	NA	NA	36587577	36536728	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_36537514_36565358_36565444_36584132_36584300_36587505
ENSMUST00000025209.12	chr18	-	702	6	FSM	ENSMUSG00000024352.13	ENSMUST00000025209.12	702	6	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_2	20.7980768341691	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAATGCCCAACCTCTC	NA	False	NA	-7	True	AATAAA	-26	NA	35795239	35789741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_35789898_35790001_35790105_35793335_35793407_35793496_35793628_35793844_35793911_35795064
ENSMUST00000025211.6	chr18	-	904	4	FSM	ENSMUSG00000024353.6	ENSMUST00000025211.6	904	4	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	0.471404520791032	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGTGTTGGCTGTTGAA	NA	False	NA	-1	True	AATAAA	-16	NA	35782420	35780319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_35780780_35780876_35780988_35781311_35781437_35782212
ENSMUST00000025215.10	chr18	-	1703	10	FSM	ENSMUSG00000024357.11	ENSMUST00000025215.10	1703	10	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	10.8423039781937	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTCTCTTGTGTCTG	NA	False	NA	-2	True	ATTAAA	-18	NA	35631982	35399448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
ENSMUST00000025218.8	chr18	-	3709	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	0	0	0	0	multi-exon	FALSE	canonical	3	901	junction_10	88.1591742248077	2254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTGTGCTTGAGATT	NA	False	NA	NA	False	ATTAAA	-16	NA	35065060	35035837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ENSMUST00000025228.12	chr18	-	2084	17	FSM	ENSMUSG00000024370.18	ENSMUST00000025228.12	2084	17	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	259.182247655969	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACTACTGTTCTTTCTA	NA	False	NA	NA	False	AATAAA	-14	NA	34784788	34764003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_34764355_34767135_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ENSMUST00000025230.15	chr17	-	2641	18	FSM	ENSMUSG00000024371.15	ENSMUST00000025230.15	2641	18	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_13	3.65842630716852	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCTGTCTTATGTCTT	NA	False	NA	0	True	AATAAA	-18	NA	35101076	35081580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35082008_35082154_35082205_35082320_35082451_35082599_35082692_35082838_35082916_35083020_35083187_35083283_35083402_35083487_35083583_35083704_35083846_35085493_35085584_35091342_35091484_35092437_35092577_35094863_35094998_35095129_35095232_35095309_35095487_35098857_35099044_35100547_35100773_35100925
ENSMUST00000025246.13	chr17	-	961	7	FSM	ENSMUSG00000024387.14	ENSMUST00000025246.13	961	7	0	0	0	0	multi-exon	FALSE	canonical	3	826	junction_1	47.9780042195264	7510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCTCCTACTGTGT	NA	False	NA	-9	True	AATAAA	-15	NA	35340262	35335173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
ENSMUST00000025249.7	chr17	-	1013	6	FSM	ENSMUSG00000024391.8	ENSMUST00000025249.7	1013	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	5.65685424949238	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGGGTTTTGTCTGCA	NA	False	NA	NA	False	AATAAA	-20	NA	35351026	35347972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35348112_35349055_35349155_35349383_35349483_35349814_35349895_35350170_35350326_35350585
ENSMUST00000025250.14	chr17	+	3858	25	FSM	ENSMUSG00000024392.18	ENSMUST00000025250.14	3858	25	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_11	162.018431736091	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8488	False	NA	32	True	AATAAA	-33	NA	35354153	35366298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ENSMUST00000025271.17	chr17	-	1362	5	NIC	ENSMUSG00000093516.2	novel	494	2	NA	NA	-221	3059	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	28184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCTAGCCTTGACCTC	NA	False	NA	NA	False	NA	NA	NA	35821669	35816914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr17_-_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184
ENSMUST00000025276.15	chr18	+	2170	20	FSM	ENSMUSG00000024410.16	ENSMUST00000025276.15	2170	20	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_9	24.4724957266604	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAATGTTGCTAACTCCC	NA	False	NA	NA	False	AATAAA	-45	NA	12301773	12323054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ENSMUST00000025278.8	chr11	+	756	4	FSM	ENSMUSG00000024414.14	ENSMUST00000025278.8	756	4	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_3	47.8632310744781	3251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAAAGGGACAGGACAG	NA	False	NA	19	True	NA	NA	NA	94544592	94550915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_94544668_94547312_94547445_94547808_94547877_94550434
ENSMUST00000025290.7	chr18	+	3763	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_9	40.2394085443611	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13104979	13126007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ENSMUST00000025305.16	chr17	-	1079	7	FSM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	0	0	0	0	multi-exon	FALSE	canonical	3	1264	junction_4	57.4071714451542	6576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCCTTTGGGCTGT	4296	False	NA	-6	True	AATAAA	-21	NA	36227281	36221270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
ENSMUST00000025314.7	chr18	-	2394	13	NIC	ENSMUSG00000097080.9	novel	1173	2	NA	NA	-12064	-11125	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGCAAGGAGCCCTGCC	NA	False	NA	NA	False	NA	NA	NA	38395682	38383311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr18_-_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
ENSMUST00000025363.7	chr18	-	2375	6	FSM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	10.9068785635488	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTTTCATTTTTGGTT	NA	False	NA	-10	True	AATAAA	-22	NA	36648858	36637979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_36639418_36639687_36639779_36640501_36640658_36645609_36645788_36648139_36648314_36648520
ENSMUST00000025364.6	chr18	-	3328	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTGTGTCTTTCTTGCC	NA	False	NA	NA	False	NA	NA	NA	40352482	40336948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ENSMUST00000025375.15	chr18	+	4101	21	FSM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_5	111.046881991346	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644565	42708619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUST00000025385.7	chr18	+	2684	24	FSM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	18.279183363144	918	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGCTCCTCTTTGCAT	NA	False	NA	14	True	AATAAA	-23	NA	50261267	50329336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275536_50275559_50275659_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
ENSMUST00000025394.14	chr18	+	860	6	FSM	ENSMUSG00000024516.14	ENSMUST00000025394.14	860	6	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_3	14.5244621242922	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGTCTGCCCAGTCTC	NA	False	NA	NA	False	AATAAA	-40	NA	65933585	65950755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_65933783_65942515_65942626_65945735_65945886_65947908_65948029_65949891_65949950_65950530
ENSMUST00000025399.9	chr18	+	2727	3	FSM	ENSMUSG00000024521.9	ENSMUST00000025399.9	2727	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	7	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTCTTTCTGTGTGTTTT	NA	False	NA	22	True	AATAAA	-34	NA	66591603	66598631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_66591884_66593913_66594070_66596340
ENSMUST00000025418.4	chr18	+	1059	7	FSM	ENSMUSG00000024537.6	ENSMUST00000025418.4	1059	7	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_3	27.1871088733041	2160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGGTTTTATCTGGAAAG	NA	False	NA	26	True	AATAAA	-32	NA	67774668	67787232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_67774806_67777378_67777551_67779062_67779122_67781197_67781317_67781842_67782017_67786222_67786344_67786955
ENSMUST00000025419.9	chr18	-	1403	5	FSM	ENSMUSG00000024538.9	ENSMUST00000025419.9	1403	5	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_3	12.8354976529934	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	False	NA	-11	True	ATTAAA	-20	NA	53551187	53539403	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_53540138_53542196_53542382_53544058_53544153_53544577_53544692_53550911
ENSMUST00000025420.14	chr18	-	1568	10	FSM	ENSMUSG00000024539.18	ENSMUST00000025420.14	1568	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	132.404915801473	1975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTGGTTTGTGTGTGT	NA	False	NA	-15	True	ATTAAA	-18	NA	67857658	67798581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ENSMUST00000025427.14	chr18	+	1852	10	FSM	ENSMUSG00000009535.14	ENSMUST00000025427.14	1852	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	337.084266125157	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGCAATTCTGAGACTC	NA	False	NA	87	True	AATAAA	-17	NA	68433470	68454977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ENSMUST00000025444.8	chr18	+	2620	15	FSM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	0	0	0	0	multi-exon	TRUE	canonical	3	205	junction_6	27.3663729300567	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCTCTCTCTCAATAGT	NA	False	NA	14	True	AATAAA	-17	NA	74349201	74354564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ENSMUST00000025463.14	chr18	+	1650	4	FSM	ENSMUSG00000024571.16	ENSMUST00000025463.14	1650	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	503.796475661441	1403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAAAGGAGTACACGTT	NA	False	NA	NA	False	AATAAA	-3	NA	80250081	80255938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_80250162_80250368_80250559_80253276_80253346_80254627
ENSMUST00000025471.4	chr18	+	693	3	FSM	ENSMUSG00000024578.4	ENSMUST00000025471.4	693	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.5	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATTGATTGGGCTTGTTC	NA	False	NA	NA	False	AGTAAA	-21	NA	61821005	61825609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_61821076_61823188_61823479_61825276
ENSMUST00000025472.7	chr18	-	2017	6	FSM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	12.1061967603372	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGACTTATTCTTTTT	NA	False	NA	-1	True	TATAAA	-16	NA	61840706	61829907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266_61835442_61836582_61836790_61840564
ENSMUST00000025474.14	chr18	+	3567	12	FSM	ENSMUSG00000024581.14	ENSMUST00000025474.14	3567	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_8	19.1691039293584	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAGTTTTATTTGCT	NA	False	NA	6	True	AATAAA	-18	NA	63110901	63132521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_63111096_63113536_63113605_63115689_63115775_63116444_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ENSMUST00000025483.11	chr18	-	2687	15	FSM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	0	0	0	0	multi-exon	FALSE	canonical	3	2259	junction_14	785.439045946889	8233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAACACTTTGCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	64649679	64632728	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ENSMUST00000025488.15	chr18	-	2400	5	FSM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	15.0228991875736	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTTCTGTTGGTAGTT	NA	False	NA	NA	False	NA	NA	NA	57108440	57088904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108405
ENSMUST00000025490.10	chr18	+	5030	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_4	197.841121547064	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGCAATGATTTAAATG	NA	False	NA	12	True	AATAAA	-22	NA	57487812	57526028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ENSMUST00000025505.7	chr18	+	3738	13	FSM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_9	21.4333592534835	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGTTTCACAAGTACT	NA	False	NA	34	True	AATAAA	-24	NA	60659272	60691838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ENSMUST00000025506.7	chr18	+	2210	11	FSM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_10	72.8288404411329	1426	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTTAAGACTGGATTA	NA	False	NA	35	True	ATTAAA	-45	NA	60693807	60705882	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
ENSMUST00000025511.11	chr18	+	597	5	FSM	ENSMUSG00000024608.12	ENSMUST00000025511.11	597	5	0	0	0	0	multi-exon	FALSE	canonical	3	20921	junction_1	2863.01274883644	187815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	68	True	AATAAA	-18	NA	60907667	60911618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUST00000025542.10	chr19	-	2617	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	0	0	0	0	multi-exon	TRUE	canonical	3	2829	junction_2	225.154079188008	13185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAAAGGTGGAGTGGGTG	NA	False	NA	NA	False	TTTAAA	-44	NA	15902423	15882041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ENSMUST00000025546.17	chr18	-	2124	12	FSM	ENSMUSG00000024644.18	ENSMUST00000025546.17	2124	12	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_11	64.2627612178223	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGTGGTCTGACTTTCT	NA	False	NA	2	True	AATAAA	-25	NA	84703827	84685589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962_84700053_84703727
ENSMUST00000025562.9	chr19	-	3236	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCAGCAGTATGTCTTG	NA	False	NA	-3	True	NA	NA	NA	9876915	9849659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ENSMUST00000025563.8	chr19	+	929	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	0	0	0	0	multi-exon	FALSE	canonical	3	5325	junction_2	217.148694574836	67118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGTGATTGAGGAT	4869	False	NA	23	True	AATAAA	-21	NA	9960009	9962462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
ENSMUST00000025568.3	chr19	-	1590	5	FSM	ENSMUSG00000024666.7	ENSMUST00000025568.3	1590	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	27.5896266738062	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1510	False	NA	-4	True	AATAAA	-15	NA	10554726	10547841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554447
ENSMUST00000025595.5	chr19	+	3267	4	FSM	ENSMUSG00000024691.14	ENSMUST00000025595.5	3267	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	5.90668171555645	331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTTTCTTTAGTTATT	NA	False	NA	4	True	AATAAA	-13	NA	12550886	12567126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_12550945_12554453_12554535_12561286_12561487_12564198
ENSMUST00000025642.14	chr19	+	2134	16	FSM	ENSMUSG00000024735.14	ENSMUST00000025642.14	2134	16	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	13.7346277707115	1830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCAGCTTCTTGTGTCTG	NA	False	NA	15	True	ATTAAA	-21	NA	10872594	10882896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876346_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
ENSMUST00000025649.10	chr19	+	4459	27	FSM	ENSMUSG00000024740.11	ENSMUST00000025649.10	4459	27	0	0	0	0	multi-exon	FALSE	canonical	3	2606	junction_4	266.254060724097	1753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTATTGGTCTCTGC	370	False	NA	56	True	AATAAA	-16	NA	10582690	10607183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUST00000025651.6	chr19	-	2341	2	FSM	ENSMUSG00000024742.16	ENSMUST00000025651.6	2341	2	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	0	1405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	2030	False	NA	NA	False	AATAAA	-14	NA	10181432	10176501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10178462_10181051
ENSMUST00000025679.11	chr19	-	1713	7	FSM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	0	0	0	0	multi-exon	TRUE	canonical	3	1089	junction_1	76.373351955305	4647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTGGCCCATGCATC	NA	False	NA	2	True	AATAAA	-26	NA	7183681	7175566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
ENSMUST00000025694.7	chr19	-	2768	11	FSM	ENSMUSG00000024766.16	ENSMUST00000025694.7	2768	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	12.0498962651137	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCAGTTTTCTGTTTCT	NA	False	NA	-8	True	NA	NA	NA	33739351	33532566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_33533880_33534506_33534579_33535664_33535737_33536911_33537056_33556761_33556899_33557864_33557975_33559452_33559652_33560446_33560565_33562269_33562376_33565600_33565744_33738997
ENSMUST00000025698.14	chr19	+	609	4	FSM	ENSMUSG00000024784.14	ENSMUST00000025698.14	609	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.05480466765633	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCGCTCTTTATTAAATC	239	False	NA	NA	False	AATAAA	-16	NA	6276409	6277798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6276456_6276807_6276918_6277000_6277186_6277530
ENSMUST00000025702.14	chr19	-	1635	8	FSM	ENSMUSG00000024787.15	ENSMUST00000025702.14	1635	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	6.49018096662888	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCCATTTGCTTATTA	NA	False	NA	1	True	NA	NA	NA	6178334	6169428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6169985_6170515_6170774_6171408_6171553_6171812_6171961_6172069_6172186_6173859_6173981_6174182_6174219_6178078
ENSMUST00000025704.3	chr19	+	2024	6	FSM	ENSMUSG00000024791.11	ENSMUST00000025704.3	2024	6	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_5	42.0218990527558	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGCTTTTTATT	NA	False	NA	35	True	AATAAA	-20	NA	6135012	6141807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677
ENSMUST00000025707.9	chr19	-	1287	8	FSM	ENSMUSG00000024792.10	ENSMUST00000025707.9	1287	8	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_7	142.172789382555	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGAAGCAGCTTTTTC	6440	False	NA	NA	False	AATAAA	-18	NA	6134973	6130791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134893
ENSMUST00000025713.12	chr19	-	1471	10	FSM	ENSMUSG00000024799.17	ENSMUST00000025713.12	1471	10	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	30.8704981223334	1119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	9961	False	NA	0	True	AATAAA	-15	NA	6117872	6112850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
ENSMUST00000025714.9	chr19	+	1145	11	FSM	ENSMUSG00000024800.9	ENSMUST00000025714.9	1145	11	0	0	0	0	multi-exon	FALSE	canonical	3	930	junction_4	72.6416547168359	3693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTTTAAATTTTACTA	NA	False	NA	NA	False	AATAAA	-26	NA	36061130	36082177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ENSMUST00000025740.8	chr19	-	2081	11	FSM	ENSMUSG00000024824.8	ENSMUST00000025740.8	2081	11	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_4	40.0660704337224	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	5998	False	NA	0	True	AATAAA	-15	NA	4251635	4245194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ENSMUST00000025743.7	chr19	+	802	7	FSM	ENSMUSG00000024829.13	ENSMUST00000025743.7	802	7	0	0	0	0	multi-exon	FALSE	canonical	3	1715	junction_6	72.3058703625708	8627	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGACTTGCTGTTAAA	7371	False	NA	13	True	NA	NA	NA	3333059	3341201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3340976
ENSMUST00000025752.15	chr19	-	2421	18	FSM	ENSMUSG00000024833.16	ENSMUST00000025752.15	2421	18	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_17	37.0964328301216	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAATCTTTTTTTTTTCC	1626	False	NA	0	True	AATAAA	-21	NA	6014230	5990569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ENSMUST00000025759.9	chr19	+	2556	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	0	0	0	0	multi-exon	FALSE	canonical	3	703	junction_2	59.7581793564697	3034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTTATGAAGAGTT	1792	False	NA	23	True	AATAAA	-40	NA	5416768	5421554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ENSMUST00000025767.14	chr19	-	1261	6	FSM	ENSMUSG00000024847.16	ENSMUST00000025767.14	1261	6	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_5	15.3310143173894	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTTGCAGAACTAATC	3902	False	NA	-21	True	TATAAA	-17	NA	4171575	4164463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
ENSMUST00000025773.5	chr19	+	913	4	FSM	ENSMUSG00000024854.5	ENSMUST00000025773.5	913	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	2.16024689946929	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACCTTACATCTCTTA	NA	False	NA	6	True	AATAAA	-18	NA	4281952	4283688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4282243_4282516_4282607_4282801_4282914_4283267
ENSMUST00000025774.11	chr19	-	3222	21	FSM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	0	0	0	0	multi-exon	FALSE	canonical	3	1448	junction_15	340.757138589935	3978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGCTAACTACTTGGA	3866	False	NA	-25	True	AATAAA	-18	NA	5345483	5323959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ENSMUST00000025791.12	chr19	-	3182	22	FSM	ENSMUSG00000024858.15	ENSMUST00000025791.12	3182	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	77.6089973043399	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCGCTGTCTCAGACTC	NA	False	NA	-8	True	TATAAA	-14	NA	4355983	4336028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355149_4355222_4355929
ENSMUST00000025800.15	chr19	-	2573	15	FSM	ENSMUSG00000024867.15	ENSMUST00000025800.15	2573	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	5.473498303048	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTCATACATTGATTC	NA	False	NA	0	True	AATAAA	-16	NA	24533236	24272157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_24272919_24281395_24281511_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337303_24337516_24356165_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
ENSMUST00000025802.10	chr19	+	787	4	FSM	ENSMUSG00000110949.2	ENSMUST00000025802.10	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	10.4243305140746	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGGCATCTTCCGTGT	3513	False	NA	9	True	ATTAAA	-18	NA	4050579	4052103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4050848_4051195_4051329_4051627_4051706_4051795
ENSMUST00000025811.6	chr19	+	1488	8	FSM	ENSMUSG00000024875.6	ENSMUST00000025811.6	1488	8	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_7	32.2509294281512	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTATTCATATTTTGTC	NA	False	NA	NA	False	GGGGCT	-14	NA	5138572	5142909	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
ENSMUST00000025815.10	chr19	-	1929	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGTGTGATGGTACTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	24938965	24897279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUST00000025823.6	chr19	-	1425	8	FSM	ENSMUSG00000024889.6	ENSMUST00000025823.6	1425	8	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_6	48.136286113662	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGTCTTGGAACCTTG	NA	False	NA	-13	True	ATTAAA	-17	NA	4675668	4672622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
ENSMUST00000025826.7	chr19	+	2401	12	FSM	ENSMUSG00000024891.7	ENSMUST00000025826.7	2401	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	25.5138918569071	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCCTGGAGTGTTCACT	4269	False	NA	18	True	ATTAAA	-19	NA	5074098	5081997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080319_5080519_5081029
ENSMUST00000025835.6	chr19	+	4317	19	FSM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	0	0	0	0	multi-exon	TRUE	canonical	3	230	junction_1	37.3718386086055	1205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATCTGTCCCTGTCTCC	NA	False	NA	18	True	AATAAA	-20	NA	3373284	3435733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ENSMUST00000025844.6	chr19	-	1241	10	FSM	ENSMUSG00000024910.6	ENSMUST00000025844.6	1241	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.15470053837925	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGTGTGGATTCAGCT	NA	False	NA	NA	False	CATAAA	-17	NA	5518535	5515267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5515480_5515557_5515759_5515832_5515898_5516047_5516174_5516258_5516340_5516416_5516514_5516608_5516764_5517050_5517165_5517865_5517951_5518430
ENSMUST00000025846.16	chr19	-	4841	23	FSM	ENSMUSG00000024908.16	ENSMUST00000025846.16	4841	23	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_9	88.0225482945391	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625720	3504927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ENSMUST00000025847.7	chr19	+	1215	10	FSM	ENSMUSG00000024911.8	ENSMUST00000025847.7	1215	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	35.2423706830007	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGGTCCTTGTTCCA	NA	False	NA	15	True	AATAAA	-15	NA	5510656	5515077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513354_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
ENSMUST00000025851.4	chr19	-	2683	18	FSM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	0	0	0	0	multi-exon	TRUE	canonical	3	495	junction_17	96.7659038009169	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATGTTTCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	4978315	4957256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ENSMUST00000025885.6	chr19	-	699	4	FSM	ENSMUSG00000079478.10	ENSMUST00000025885.6	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	15.6276108929747	2143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTCTTTCTTGGTTCT	NA	False	NA	3	True	AAAACA	-17	NA	5781755	5780330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5780741_5781268_5781354_5781471_5781624_5781703
ENSMUST00000025890.10	chr19	-	2586	17	FSM	ENSMUSG00000024941.10	ENSMUST00000025890.10	2586	17	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	68.5770552007011	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9907	False	NA	-11	True	AATAAA	-13	NA	5821429	5808454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809782_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ENSMUST00000025904.12	chr19	+	1262	6	NIC	ENSMUSG00000038812.17	novel	985	4	NA	NA	-2992	-728	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCAAAGCGGAAGTGGT	6273	False	NA	NA	False	NA	NA	NA	6884073	6887474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr19_+_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6886826
ENSMUST00000025915.13	chr19	-	1074	6	FSM	ENSMUSG00000024963.13	ENSMUST00000025915.13	1074	6	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	27.3978101314685	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9276	False	NA	-4	True	AATAAA	-17	NA	6969871	6965278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969526
ENSMUST00000025918.9	chr19	-	2108	14	FSM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	0	0	0	0	multi-exon	FALSE	canonical	3	2912	junction_9	209.620169317304	6788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3763	False	NA	-8	True	AATAAA	-29	NA	7017335	6998069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ENSMUST00000025932.9	chr19	+	3965	9	FSM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	123.021784148174	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTGTGTGTGTGGTGT	3932	False	NA	21	True	TATAAA	-24	NA	53933310	54021562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_53933445_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ENSMUST00000025955.8	chr19	-	5125	22	FSM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	309.066534016512	2614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8754	False	NA	-31	True	AATAAA	-17	NA	60779081	60749554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ENSMUST00000025957.9	chr19	+	2307	9	FSM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	50.1458809375207	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60800048	60824665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_60800112_60803049_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ENSMUST00000025961.7	chr19	-	1478	7	FSM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_4	52.5148127251308	3765	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGGCACCGTTTCTCC	1447	False	NA	-1	True	AATAAA	-34	NA	60862994	60852488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_60853158_60853603_60853770_60855953_60856058_60858441_60858578_60859857_60860000_60861565_60861702_60862869
ENSMUST00000025963.8	chr19	-	3977	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	18.6711006638602	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTAGTCTTACGAGGTT	2288	False	NA	NA	False	AATAAA	-17	NA	38807681	38776571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ENSMUST00000025979.13	chr19	-	3527	19	FSM	ENSMUSG00000025007.14	ENSMUST00000025979.13	3527	19	0	0	0	0	multi-exon	FALSE	canonical	3	945	junction_12	98.5252364738204	1461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576907	40538700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ENSMUST00000025981.15	chr19	-	2743	14	FSM	ENSMUSG00000025008.16	ENSMUST00000025981.15	2743	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	4.39337855732112	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGACTTTTTTTCTTG	NA	False	NA	-1	True	CATAAA	-17	NA	40600677	40584889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_40585987_40591248_40591387_40593749_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
ENSMUST00000025997.7	chr19	-	1948	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	1591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCAGTGTGTTAACAAAG	NA	False	NA	-8	True	AATAAA	-17	NA	53379009	53367826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
ENSMUST00000026009.10	chr19	-	843	6	FSM	ENSMUSG00000025035.10	ENSMUST00000026009.10	843	6	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_1	35.3870032639103	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAAATGTCTCAGAGCA	NA	False	NA	-21	True	AATAAA	-35	NA	46561532	46519534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_46519826_46530790_46530977_46531920_46531972_46540011_46540129_46546676_46546821_46561478
ENSMUST00000026011.8	chr19	+	3205	12	FSM	ENSMUSG00000025036.8	ENSMUST00000026011.8	3205	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	6.85384611817119	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAACACTGTCTGCAAAC	NA	False	NA	15	True	AATAAA	-15	NA	46561805	46585334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
ENSMUST00000026016.13	chrX	-	1983	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_3	21.435951110226	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGCTTATATATCC	NA	False	NA	-9	True	AATAAA	-21	NA	17438564	17422802	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
ENSMUST00000026036.5	chrX	+	1808	2	FSM	ENSMUSG00000025056.5	ENSMUST00000026036.5	1808	2	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_1	0	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTGGAGAGTTTTCTTG	NA	False	NA	11	True	AATAAA	-23	NA	85235369	85239553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_85236581_85238956
ENSMUST00000026050.8	chr19	+	1182	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_4	32.103582354622	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTCCAAACCACCTCAG	8468	False	NA	21	True	ATTAAA	-30	NA	47843408	47853229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
ENSMUST00000026062.10	chr19	+	2350	7	FSM	ENSMUSG00000025076.13	ENSMUST00000026062.10	2350	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	6.36177822799744	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGACTGGTCCGGTCTG	NA	False	NA	14	True	ATTAAA	-15	NA	56385560	56430776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_56385750_56392847_56392958_56421673_56421811_56422233_56422363_56424658_56424835_56425150_56425281_56429297
ENSMUST00000026073.14	chr19	+	3789	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGAGTTCTTTGCAGTAAG	NA	False	NA	18	True	AATAAA	-18	NA	57441343	57479437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
ENSMUST00000026092.9	chr7	-	887	5	FSM	ENSMUSG00000025102.15	ENSMUST00000026092.9	887	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	120.296508677517	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTAGCAGTTTCGAGTGC	NA	False	NA	NA	False	AATAAA	-17	NA	81439226	81431929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439102
ENSMUST00000026126.10	chr7	+	3240	23	FSM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_9	43.027187253819	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGCTGTTCTAGTTTCTG	933	False	NA	25	True	AATAAA	-13	NA	97130162	97190601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ENSMUST00000026129.16	chr11	-	1881	14	FSM	ENSMUSG00000025137.16	ENSMUST00000026129.16	1881	14	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_7	79.5574296680368	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508762	120500912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ENSMUST00000026133.15	chr11	-	1861	8	FSM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_7	93.9428832116752	2139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCCCAGAGCTCCAGTC	NA	False	NA	-16	True	AATAAA	-13	NA	120534574	120530241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ENSMUST00000026135.15	chr11	+	1820	16	FSM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_3	62.8477525453377	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	16	True	AATAAA	-20	NA	120563817	120600273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUST00000026137.8	chr11	-	692	4	FSM	ENSMUSG00000025144.18	ENSMUST00000026137.8	692	4	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_3	156.895577446346	2315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	False	NA	-3	True	AATAAA	-18	NA	120604564	120601768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120602133_120602215_120602305_120602528_120602722_120604518
ENSMUST00000026142.8	chrX	-	2821	13	FSM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	0	0	0	0	multi-exon	TRUE	canonical	3	1240	junction_10	166.264514821681	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGCTTCTCATCTT	NA	False	NA	-2	True	AATAAA	-21	NA	93585749	93579079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ENSMUST00000026144.5	chr11	-	892	8	FSM	ENSMUSG00000039450.12	ENSMUST00000026144.5	892	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	11.7438650940369	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGATCTGTGCTATCTG	9984	False	NA	-4	True	AATAAA	-37	NA	120618107	120616224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120616434_120616563_120616682_120616767_120616833_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
ENSMUST00000026150.15	chr19	-	5103	12	FSM	ENSMUSG00000025154.16	ENSMUST00000026150.15	5103	12	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	42.9826026693522	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGTTCTGACTGGTC	4527	False	NA	NA	False	ATTAAA	-17	NA	41790486	41755026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ENSMUST00000026154.9	chr19	+	1821	11	FSM	ENSMUSG00000025157.9	ENSMUST00000026154.9	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_7	37.0513157661101	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGCTTCTCTGTGCCTCG	4139	False	NA	18	True	AATAAA	-24	NA	41921928	41932543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ENSMUST00000026159.6	chr11	-	982	4	FSM	ENSMUSG00000025163.7	ENSMUST00000026159.6	982	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	2.49443825784929	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTTTTTGTTGCTTT	7896	False	NA	NA	False	AATAAA	-22	NA	120930244	120927572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120927977_120928505_120928643_120928861_120929177_120930118
ENSMUST00000026169.7	chr11	-	1308	9	FSM	ENSMUSG00000025169.7	ENSMUST00000026169.7	1308	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_7	19.9483708607996	715	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGATCTGGGCGCTGC	NA	False	NA	-7	True	AGTAAA	-41	NA	121095537	121068416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_121068765_121074236_121074361_121085905_121086060_121087562_121087620_121088256_121088322_121090591_121090635_121091736_121091813_121093716_121093935_121095314
ENSMUST00000026173.13	chr11	-	2321	10	FSM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_4	31.7350139610984	1112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGAGCCATATGTAATG	NA	False	NA	1	True	AATAAA	-33	NA	121245271	121218049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ENSMUST00000026196.14	chr19	-	2058	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_5	49.6934351801121	3845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTGTGATCCATTCA	8317	False	NA	-3	True	NA	NA	NA	43513044	43488190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ENSMUST00000026199.14	chr19	+	1298	9	FSM	ENSMUSG00000025193.15	ENSMUST00000026199.14	1298	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	8.4400459121974	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGTTATAGTCTCAGG	9172	False	NA	9	True	AATAAA	-12	NA	43741434	43757070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_43741660_43744058_43744131_43747166_43747227_43748288_43748499_43749127_43749164_43751341_43751446_43753398_43753427_43755639_43755746_43756613
ENSMUST00000026221.7	chr19	+	5455	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	0	0	0	0	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	5278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1067	False	NA	22	True	AATAAA	-23	NA	44282112	44295303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ENSMUST00000026222.11	chr19	-	680	5	FSM	ENSMUSG00000025204.11	ENSMUST00000026222.11	680	5	0	0	0	0	multi-exon	FALSE	canonical	3	4404	junction_1	502.944517317765	18367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCTTTCTCCAGG	1974	False	NA	-7	True	AATAAA	-29	NA	44543879	44538678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369_44543497_44543755
ENSMUST00000026227.3	chr19	+	3488	5	FSM	ENSMUSG00000025209.6	ENSMUST00000026227.3	3488	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	30.3593066455741	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	2553	False	NA	26	True	AATGAA	-19	NA	44994996	45001201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_44996815_44997718_44997960_44998570_44998679_44998856_44998999_45000022
ENSMUST00000026239.7	chr19	-	2324	9	FSM	ENSMUSG00000025218.7	ENSMUST00000026239.7	2324	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	11.9973955507018	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGCTGTCTGTGAGCT	NA	False	NA	2	True	AATAAA	-19	NA	45548970	45540713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
ENSMUST00000026262.8	chr9	+	1996	14	FSM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	0	0	0	0	multi-exon	FALSE	canonical	3	1100	junction_8	84.5408762866438	3239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGGTTGCTTGTGT	NA	False	NA	32	True	AATAAA	-24	NA	59446822	59472392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ENSMUST00000026288.5	chrX	-	1508	8	FSM	ENSMUSG00000025257.6	ENSMUST00000026288.5	1508	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	14.6816559150582	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTGTCGTAAGAGTA	NA	False	NA	-2	True	AATAAA	-17	NA	150799291	150787577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799158
ENSMUST00000026289.10	chrX	-	962	6	Antisense	novelGene_ENSMUSG00000025260.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCGACGCAGAGCCGCCTA	NA	False	NA	NA	False	NA	NA	NA	150787438	150784840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chrX_-_150784931_150785273_150785439_150786356_150786522_150786648_150786778_150786857_150786967_150787134
ENSMUST00000026295.10	chrX	-	3804	5	FSM	ENSMUSG00000025264.13	ENSMUST00000026295.10	3804	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	125.415310070182	1756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCATTTTCCTTGTTTC	NA	False	NA	-2	True	AAAAAG	-17	NA	149879539	149870090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_149873411_149873591_149873778_149874671_149874764_149879160_149879252_149879424
ENSMUST00000026303.16	chrX	-	1884	6	FSM	ENSMUSG00000025269.17	ENSMUST00000026303.16	1884	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	8.28009661779378	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATGTTGAGTGGATAT	NA	False	NA	-4	True	AATAAA	-21	NA	149371145	149354503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
ENSMUST00000026318.15	chrX	-	1162	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	0	0	0	0	multi-exon	FALSE	canonical	3	1003	junction_1	103.839106313566	6365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGCATTTTTACTAGT	NA	False	NA	-7	True	AATAAA	-24	NA	153999445	153996127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
ENSMUST00000026322.9	chr14	-	4687	31	FSM	ENSMUSG00000025280.9	ENSMUST00000026322.9	4687	31	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_23	15.9947560851118	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTAAGTGTTTTTTGTT	NA	False	NA	-3	True	AATACA	-26	NA	24537120	24498763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ENSMUST00000026324.10	chrX	+	1752	15	FSM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	0	0	0	0	multi-exon	FALSE	canonical	2	666	junction_2	111.349262068796	3272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAGTCTCCCATGTTGT	NA	False	NA	26	True	AATAAA	-20	NA	154045438	154080650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ENSMUST00000026328.11	chrX	-	990	7	FSM	ENSMUSG00000025289.16	ENSMUST00000026328.11	990	7	0	0	0	0	multi-exon	FALSE	canonical	3	951	junction_2	71.6488349909163	5695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTTGCCATTGTAATTT	NA	False	NA	-1	True	AATAAA	-22	NA	154121463	154106913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_154107025_154109590_154109626_154111441_154111573_154113298_154113422_154115351_154115469_154117833_154117952_154121108
ENSMUST00000026381.7	chr4	-	2316	16	FSM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	15.9114214743163	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTAGTTTACCACGGAG	NA	False	NA	-11	True	AATAAA	-14	NA	140501547	140473175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
ENSMUST00000026383.4	chrX	+	1586	9	FSM	ENSMUSG00000025333.11	ENSMUST00000026383.4	1586	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	3.91910385164772	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACTCCATTTTGACATG	NA	False	NA	NA	False	AATAAA	-10	NA	151564981	151591642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_151565289_151568038_151568149_151569121_151569217_151573479_151573573_151576324_151576435_151578551_151578661_151580695_151580814_151581373_151581612_151591236
ENSMUST00000026387.11	chr5	-	1548	5	FSM	ENSMUSG00000025337.11	ENSMUST00000026387.11	1548	5	0	0	0	0	multi-exon	FALSE	canonical	3	697	junction_4	74.8765650921568	2451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTTGCATTTCTAGT	NA	False	NA	0	True	AATAAA	-17	NA	130284371	130274571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050
ENSMUST00000026405.10	chr10	-	550	4	FSM	ENSMUSG00000090247.8	ENSMUST00000026405.10	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_1	37.4788829431544	3080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTGTTTGAAGGAG	NA	False	NA	-1	True	AATAAA	-19	NA	128759393	128755782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128755977_128756427_128756561_128758522_128758596_128759243
ENSMUST00000026409.5	chr10	-	1573	4	FSM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_3	176.577335905703	2460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCAGTTTCCACTC	NA	False	NA	NA	False	AATAAA	-15	NA	128657463	128653770	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128654885_128655822_128655975_128656129_128656384_128657410
ENSMUST00000026414.9	chr10	-	2834	24	FSM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_14	14.5196561901106	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCCGCAAGGTTCTGA	9991	False	NA	-10	True	AATAAA	-16	NA	128579944	128556002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664
ENSMUST00000026415.9	chr10	-	2240	7	FSM	ENSMUSG00000025358.17	ENSMUST00000026415.9	2240	7	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_2	273.112309011024	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGAATCTCTTTCATAT	8275	False	NA	-16	True	ATTAAA	-20	NA	128540872	128533807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ENSMUST00000026416.15	chr10	-	2406	8	FSM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	0	0	0	0	multi-exon	FALSE	canonical	3	682	junction_2	218.467295455575	1831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAGAGTGAATCTCTTT	8248	False	NA	-21	True	ATTAAA	-15	NA	128540899	128533812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ENSMUST00000026420.7	chr10	-	681	4	FSM	ENSMUSG00000025362.7	ENSMUST00000026420.7	681	4	0	0	0	0	multi-exon	FALSE	canonical	3	11844	junction_3	3964.03030036631	231897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCATCGGAGTGTGTT	NA	False	NA	-12	True	NA	NA	NA	128462616	128460405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128460506_128461075_128461207_128461931_128462110_128462344
ENSMUST00000026425.13	chr10	-	2432	12	FSM	ENSMUSG00000025364.14	ENSMUST00000026425.13	2432	12	0	0	0	0	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	14111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTGTTCTCTTTG	8745	False	NA	-5	True	AATAAA	-14	NA	128401803	128393634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ENSMUST00000026439.14	chr10	-	1130	7	FSM	ENSMUSG00000025374.14	ENSMUST00000026439.14	1130	7	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	32.5444140965679	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	False	NA	-7	True	AATAAA	-13	NA	128245743	128237263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115_128245218_128245604
ENSMUST00000026446.4	chr10	+	763	6	FSM	ENSMUSG00000025381.4	ENSMUST00000026446.4	763	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	1015.96602305392	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACTGTGTTGTCTTTTTT	NA	False	NA	33	True	AATGAA	-29	NA	128158336	128163056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128158400_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ENSMUST00000026449.3	chr10	-	1360	4	FSM	ENSMUSG00000025383.3	ENSMUST00000026449.3	1360	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	5.73488351136175	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGGTCTAAATTTCTAA	NA	False	NA	NA	False	NA	NA	NA	128133953	128132007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128132845_128132946_128133094_128133358_128133461_128133679
ENSMUST00000026459.6	chr10	+	1916	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	0	0	0	0	multi-exon	FALSE	canonical	3	8904	junction_3	854.417771581948	44427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGGGCCTTGTGTTTC	NA	False	NA	11	True	ATTAAA	-22	NA	127919141	127926260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ENSMUST00000026461.8	chr10	+	1583	13	FSM	ENSMUSG00000025395.15	ENSMUST00000026461.8	1583	13	0	0	0	0	multi-exon	FALSE	canonical	2	393	junction_7	89.7794751970998	3307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTCGGTTCTACCC	984	False	NA	18	True	TATAAA	-20	NA	127851040	127865906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ENSMUST00000026470.6	chr10	-	2289	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	0	0	0	0	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	4386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTATTTTGCCCACGG	NA	False	NA	-21	True	NA	NA	NA	127358313	127353007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ENSMUST00000026475.15	chr10	+	890	4	FSM	ENSMUSG00000025408.16	ENSMUST00000026475.15	890	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	321.555593949165	3987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCACTTTTTCTTCTT	NA	False	NA	29	True	AGTAAA	-18	NA	127126642	127132157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127126761_127129580_127129629_127131189_127131348_127131591
ENSMUST00000026479.11	chr10	+	1784	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_8	36.9826442582377	3198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAGAGTTTCAAAATA	9216	False	NA	16	True	AATAAA	-18	NA	127102255	127117819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ENSMUST00000026480.13	chr4	-	2121	10	FSM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	0	0	0	0	multi-exon	TRUE	canonical	3	276	junction_4	15.561903466677	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTGTTTGTGTCCT	NA	False	NA	1	True	ATTAAA	-41	NA	106536141	106519452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
ENSMUST00000026487.6	chr18	+	1402	3	FSM	ENSMUSG00000090000.3	ENSMUST00000026487.6	1402	3	0	0	0	0	multi-exon	FALSE	canonical	3	1641	junction_2	78	4639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTCTGATTTATGCCTT	NA	False	NA	15	True	AATAAA	-17	NA	77017712	77029308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_77017913_77027263_77027366_77028208
ENSMUST00000026495.15	chr18	+	2471	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	0	0	0	0	multi-exon	FALSE	canonical	3	5078	junction_4	224.265707226978	28008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGTTGATGAGTC	NA	False	NA	20	True	ATTAAA	-22	NA	77861428	77870569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ENSMUST00000026506.5	chr7	+	1504	7	FSM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	0	0	0	0	multi-exon	FALSE	canonical	3	1088	junction_4	64.1950153828161	4181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGCTGTGATTTTGCTCT	NA	False	NA	11	True	AATAAA	-17	NA	97345840	97368086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
ENSMUST00000026519.10	chr13	+	2565	13	FSM	ENSMUSG00000062822.9	ENSMUST00000026519.10	2565	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	23.5189049253763	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599303	119622653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ENSMUST00000026520.14	chr13	+	2551	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	70.3985795311241	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATCTTAAAGAATTTTT	NA	False	NA	46	True	AATAAA	-31	NA	119565457	119594754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUST00000026538.13	chr7	-	1557	8	FSM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	0	0	0	0	multi-exon	FALSE	canonical	3	1613	junction_2	95.2071854602651	7502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTTTTTAACT	NA	False	NA	-1	True	NA	NA	NA	139696389	139685622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ENSMUST00000026539.14	chr7	-	685	6	FSM	ENSMUSG00000025466.20	ENSMUST00000026539.14	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_5	86.8506764510214	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTGGTGAGTTCC	1471	False	NA	0	True	NA	NA	NA	139682354	139679382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139682219
ENSMUST00000026540.9	chr7	+	620	5	FSM	ENSMUSG00000025467.9	ENSMUST00000026540.9	620	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	1.08972473588517	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAATGCGTGTCTTTAAG	NA	False	NA	NA	False	AATAAA	-18	NA	139673307	139677113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_139673382_139674944_139675012_139676062_139676116_139676586_139676694_139676794
ENSMUST00000026547.9	chr7	-	2960	18	FSM	ENSMUSG00000025474.10	ENSMUST00000026547.9	2960	18	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_17	73.93539684464	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGCATTATTACTG	NA	False	NA	NA	False	NA	NA	NA	139616179	139575908	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
ENSMUST00000026553.6	chr7	-	1460	13	FSM	ENSMUSG00000025480.6	ENSMUST00000026553.6	1460	13	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_11	16.7779617355625	484	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTATATTGTGTGTG	NA	False	NA	0	True	AATAAA	-18	NA	140367765	140357141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140361939_140362003_140367648
ENSMUST00000026560.14	chr7	+	1989	13	FSM	ENSMUSG00000025487.16	ENSMUST00000026560.14	1989	13	0	0	0	0	multi-exon	FALSE	canonical	3	1065	junction_10	109.792987025584	4437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	28	True	AATAAA	-16	NA	140461880	140478555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
ENSMUST00000026564.9	chr7	+	736	2	FSM	ENSMUSG00000025491.15	ENSMUST00000026564.9	736	2	0	0	0	0	multi-exon	FALSE	canonical	3	1139	junction_1	0	6622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTCCTGTGTTGAGT	NA	False	NA	24	True	AATAAA	-28	NA	140547952	140549738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140548352_140549401
ENSMUST00000026565.7	chr7	-	678	2	FSM	ENSMUSG00000025492.7	ENSMUST00000026565.7	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	1854	junction_1	0	10034	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTGCTTTTATTCCTC	NA	False	NA	2	True	AATAAA	-23	NA	140590683	140589498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140589803_140590309
ENSMUST00000026576.5	chr7	-	1229	8	Antisense	novelGene_ENSMUSG00000025503.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12826	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGCCGGTGCGTGCTAAC	NA	False	NA	NA	False	NA	NA	NA	140982881	140972111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr7_-_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982656
ENSMUST00000026577.13	chr7	+	3191	21	FSM	ENSMUSG00000025504.15	ENSMUST00000026577.13	3191	21	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_6	10.2434125173206	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGATATCTGTTTCTTGG	NA	False	NA	7	True	AATAAA	-19	NA	140918792	140942933	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ENSMUST00000026595.13	chr8	+	1122	6	FSM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_4	36.201657420621	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTTTGTATGTTGTGA	NA	False	NA	25	True	TATAAA	-17	NA	65399836	65421685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
ENSMUST00000026599.10	chrX	+	1359	9	FSM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_1	40.3205902734571	2159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGCTTTGTTTATTTAT	NA	False	NA	7	True	AATAAA	-20	NA	111221030	111282452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
ENSMUST00000026607.15	chrX	-	4868	15	FSM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	0	0	0	0	multi-exon	TRUE	canonical	3	145	junction_7	16.3001189428489	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACTGTAATGGCTTATT	NA	False	NA	-9	True	AATAAA	-16	NA	112095214	111950289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ENSMUST00000026608.11	chr5	+	1492	6	FSM	ENSMUSG00000025532.14	ENSMUST00000026608.11	1492	6	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_4	51.2382669496149	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCCACCATACCTGG	NA	False	NA	5	True	AAAACA	-1	NA	130058130	130089630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088545
ENSMUST00000026613.14	chr5	-	2687	12	FSM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_6	16.6092675514317	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTTTCGTTACTATC	NA	False	NA	NA	False	NA	NA	NA	130031890	130017851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
ENSMUST00000026625.7	chr14	+	1231	8	FSM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_7	45.2372430997437	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGGTTTTGCTATTGT	NA	False	NA	12	True	AATAAA	-22	NA	122419115	122639646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ENSMUST00000026649.14	chr11	+	1520	4	FSM	ENSMUSG00000048277.16	ENSMUST00000026649.14	1520	4	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_1	45.536310297998	2422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGCTGGGTGGCGC	NA	False	NA	14	True	AATAAA	-14	NA	117700493	117705109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_117700630_117703284_117703523_117703871_117704012_117704103
ENSMUST00000026666.13	chr11	+	3363	20	FSM	ENSMUSG00000025579.15	ENSMUST00000026666.13	3363	20	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	100.783495768854	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119158851	119176280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_119158918_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ENSMUST00000026667.15	chr11	-	1509	12	FSM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	0	0	0	0	multi-exon	FALSE	canonical	2	960	junction_1	150.634415963708	7102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	False	NA	-10	True	ATTAAA	-20	NA	119190915	119179188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
ENSMUST00000026704.14	chr16	-	2394	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	0	0	0	0	multi-exon	FALSE	canonical	3	4287	junction_9	381.591725405517	17793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGGTGAACATAATTTAT	NA	False	NA	-13	True	AATAAA	-28	NA	87292761	87280213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ENSMUST00000026710.12	chr16	+	3205	18	FSM	ENSMUSG00000025616.15	ENSMUST00000026710.12	3205	18	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_5	31.0441141639032	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATTAGAGTTTAAGT	NA	False	NA	10	True	AATAAA	-18	NA	87251590	87280405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ENSMUST00000026723.9	chrX	+	1289	9	FSM	ENSMUSG00000025630.9	ENSMUST00000026723.9	1289	9	0	0	0	0	multi-exon	FALSE	canonical	3	2155	junction_4	129.05328356923	8959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCACTTTTTGAATTCTTT	NA	False	NA	12	True	AATAAA	-16	NA	52077013	52110536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52101153_52101172_52105223_52105307_52108981_52109029_52109199_52109277_52109943
ENSMUST00000026735.9	chr9	+	1526	4	FSM	ENSMUSG00000025645.9	ENSMUST00000026735.9	1526	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	5.71547606649408	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGTTATATCAGACTCAG	NA	False	NA	14	True	ATTAAA	-28	NA	108911560	108921557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108911636_108918404_108918716_108919908_108920074_108920582
ENSMUST00000026737.12	chr9	+	1834	6	FSM	ENSMUSG00000025647.17	ENSMUST00000026737.12	1834	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	42.9678949914934	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTCTTCAGCGCCT	NA	False	NA	18	True	AATAAA	-18	NA	108867652	108886792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108867833_108869937_108870095_108880434_108880522_108885045_108885162_108885354_108885574_108885717
ENSMUST00000026743.14	chr9	+	1653	13	FSM	ENSMUSG00000025651.15	ENSMUST00000026743.14	1653	13	0	0	0	0	multi-exon	FALSE	canonical	3	5755	junction_3	194.83802033142	8247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	False	NA	18	True	AATAAA	-14	NA	108765700	108778691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ENSMUST00000026760.3	chrX	+	4007	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	10.5	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTACTTTGTGTCTTC	NA	False	NA	18	True	ATTAAA	-24	NA	80114321	80141478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_80114767_80127896_80128038_80138057
ENSMUST00000026816.15	chr7	-	2114	8	FSM	ENSMUSG00000025722.17	ENSMUST00000026816.15	2114	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	16.071269840486	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGTGTGTATGAGT	NA	False	NA	-3	True	AATAAA	-16	NA	80551017	80540470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
ENSMUST00000026817.11	chr7	-	705	3	FSM	ENSMUSG00000025723.13	ENSMUST00000026817.11	705	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	1.5	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGGGCCTCTCCTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	80554824	80551975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_80552252_80553881_80554055_80554568
ENSMUST00000026818.12	chr7	-	1345	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	0	0	0	0	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	3808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTTCCCTGAATTCTGT	1385	False	NA	-5	True	AATAAA	-18	NA	80597528	80565124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
ENSMUST00000026828.7	chr17	-	842	5	FSM	ENSMUSG00000025732.7	ENSMUST00000026828.7	842	5	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	22.6770809408971	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	7762	False	NA	-4	True	AATAAA	-15	NA	26087738	26082671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26083014_26083224_26083327_26083567_26083696_26087387_26087518_26087598
ENSMUST00000026833.6	chr17	+	3099	9	FSM	ENSMUSG00000025737.6	ENSMUST00000026833.6	3099	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	16.5529453572468	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTGTCACTTTCATTG	NA	False	NA	18	True	AATAAA	-20	NA	26042600	26047704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046331_26046401_26046507_26046626_26046968_26047127_26047313_26047388
ENSMUST00000026839.5	chrX	-	3699	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	0	0	0	0	multi-exon	TRUE	canonical	3	187	junction_5	11.6535640709422	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTTGTCATCCTTTTG	NA	False	NA	-3	True	AATAAA	-24	NA	166165745	166129317	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ENSMUST00000026841.15	chr5	+	2033	16	FSM	ENSMUSG00000059447.14	ENSMUST00000026841.15	2033	16	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_6	59.1301389591918	1810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTCTCGTTATTAGTGG	NA	False	NA	10	True	AATAAA	-25	NA	30360245	30389591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUST00000026843.12	chr5	-	2552	20	FSM	ENSMUSG00000025745.13	ENSMUST00000026843.12	2552	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	102.267992951223	1661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGGCCTGTTTTCTTCT	NA	False	NA	-3	True	AATAAA	-23	NA	30359974	30324423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_30324959_30325042_30325064_30325717_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
ENSMUST00000026858.11	chr3	+	3479	16	FSM	ENSMUSG00000025758.11	ENSMUST00000026858.11	3479	16	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_10	36.6472675955824	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTATTGGCTAAATA	7785	False	NA	27	True	AATAAA	-23	NA	40754453	40771318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ENSMUST00000026865.15	chr3	+	5481	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	3603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGTTGAAATCTGCTT	NA	False	NA	19	True	AATAAA	-28	NA	41510165	41571299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ENSMUST00000026881.11	chr1	+	632	5	FSM	ENSMUSG00000025779.11	ENSMUST00000026881.11	632	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.707106781186548	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTCTGTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	16758656	16779835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_16758844_16761907_16761998_16771018_16771148_16776396_16776450_16779662
ENSMUST00000026887.14	chr2	-	1060	9	FSM	ENSMUSG00000025781.15	ENSMUST00000026887.14	1060	9	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_1	1503.84357564209	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATTGTAACTTTCAGAA	9587	False	NA	12	True	AATAAA	-33	NA	10085238	10060826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_10060973_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUST00000026891.5	chr9	+	1053	8	FSM	ENSMUSG00000025785.6	ENSMUST00000026891.5	1053	8	0	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_3	103.377058995362	3325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTGTTAGCATCTCC	NA	False	NA	15	True	AATAAA	-20	NA	122942279	122965194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_122942388_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ENSMUST00000026895.14	chr7	-	1571	9	FSM	ENSMUSG00000078671.12	ENSMUST00000026895.14	1571	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	14.3330910832242	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAGAGTTGAATAAGCAG	NA	False	NA	NA	False	NA	NA	NA	73191493	73150727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
ENSMUST00000026899.4	chr11	+	2023	11	FSM	ENSMUSG00000025792.10	ENSMUST00000026899.4	2023	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_8	8.74356906531881	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGGGGCTGGCAGATC	NA	False	NA	23	True	AATAAA	-37	NA	120382665	120390013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
ENSMUST00000026901.12	chr7	+	653	1	FSM	ENSMUSG00000046721.12	ENSMUST00000026901.12	653	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26703	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTACACAGAATAATAAAAGT	NA	False	NA	NA	False	AAGAAA	-9	NA	44974388	44975041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44974400_44975000
ENSMUST00000026924.7	chr2	-	3852	18	FSM	ENSMUSG00000025815.14	ENSMUST00000026924.7	3852	18	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	14.4538401405885	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATCCATTGCCTTTCC	NA	False	NA	NA	False	AAAAAG	-26	NA	5947554	5901988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_5902352_5902867_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ENSMUST00000026937.12	chr5	+	957	5	FSM	ENSMUSG00000025825.13	ENSMUST00000026937.12	957	5	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_1	28.9179874818425	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTCTCGACTCCCTCA	3595	False	NA	NA	False	AATAAA	-30	NA	113910808	113916349	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113914911_113915893
ENSMUST00000026957.4	chr2	-	1861	3	FSM	ENSMUSG00000025839.4	ENSMUST00000026957.4	1861	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	1.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATTTATTTATTTAT	NA	False	NA	-7	True	AATAAA	-16	NA	87322762	87319430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_87320426_87321167_87321750_87322478
ENSMUST00000026986.7	chr13	+	648	2	FSM	ENSMUSG00000025868.7	ENSMUST00000026986.7	648	2	0	0	0	0	multi-exon	FALSE	canonical	3	1416	junction_1	0	6143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTCTTAATCTCATTCC	5978	False	NA	23	True	AATAAA	-27	NA	54738019	54738971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_54738233_54738536
ENSMUST00000026987.12	chr13	-	1756	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	0	0	0	0	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	2509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGATGCACTTTTATTT	NA	False	NA	-3	True	NA	NA	NA	54737903	54731997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
ENSMUST00000026989.15	chr13	-	2727	9	FSM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_7	24.8696602308918	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTCTTGTCCATTCTG	NA	False	NA	NA	False	AATAAA	-26	NA	54713248	54699030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
ENSMUST00000026990.6	chr13	-	2335	6	FSM	ENSMUSG00000025872.6	ENSMUST00000026990.6	2335	6	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_3	36.0699320764539	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTGTCTAAAGTTACTA	NA	False	NA	-3	True	AATAAA	-15	NA	54616662	54606649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614198_54615638_54615796_54616353
ENSMUST00000026991.16	chr13	+	1748	11	FSM	ENSMUSG00000025873.17	ENSMUST00000026991.16	1748	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	87.926617130423	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATGAGGCTGACTTA	NA	False	NA	1	True	NA	NA	NA	54769636	54809399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_54769717_54786062_54786132_54789231_54789310_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ENSMUST00000026993.14	chr13	+	1585	8	FSM	ENSMUSG00000025875.15	ENSMUST00000026993.14	1585	8	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_3	20.9606044468071	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATGTTCACCGT	NA	False	NA	18	True	AATAAA	-19	NA	54937189	54944589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ENSMUST00000027027.7	chr9	+	4446	18	FSM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	0	0	0	0	multi-exon	TRUE	canonical	3	200	junction_7	32.0504576240346	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGATTATCTTGTATTTTA	NA	False	NA	-51	True	NA	NA	NA	3403591	3479236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ENSMUST00000027036.11	chr1	+	2507	9	FSM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_8	45.3636349403352	2028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTATATAGTACTGTT	NA	False	NA	21	True	AATAAA	-22	NA	4878045	4916962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ENSMUST00000027050.10	chr1	-	1698	8	FSM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_7	104.105715501119	3474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCTGACTGGCCTGAGT	NA	False	NA	-1	True	AGTAAA	-40	NA	10108352	10094825	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
ENSMUST00000027057.8	chr1	+	1581	9	FSM	ENSMUSG00000025925.15	ENSMUST00000027057.8	1581	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	336.315978656977	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCCACCTAGCATTGA	NA	False	NA	51	True	TATAAA	-11	NA	15875887	15913694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ENSMUST00000027064.8	chr1	+	1261	5	FSM	ENSMUSG00000025933.16	ENSMUST00000027064.8	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	35.5984550226551	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTCTCATTCATTTC	NA	False	NA	14	True	AATAAA	-14	NA	21288885	21300388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21299631
ENSMUST00000027065.12	chr1	+	1168	5	FSM	ENSMUSG00000025933.16	ENSMUST00000027065.12	1168	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	3.08220700148449	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTCATTCATTTCTAT	NA	False	NA	17	True	AATAAA	-17	NA	21288798	21300391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21299814
ENSMUST00000027068.11	chr1	-	2938	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	0	0	0	0	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGTCTATTTTTTGTAA	9656	False	NA	-9	True	ATTAAA	-15	NA	13660134	13634921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ENSMUST00000027108.13	chr1	+	802	6	FSM	ENSMUSG00000025967.17	ENSMUST00000027108.13	802	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1594.84562262308	47831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAGTGCACTTAAATAAA	NA	False	NA	-4	True	TTTAAA	-10	NA	63216303	63218781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_63216451_63216881_63217036_63217581_63217725_63217990_63218058_63218406_63218533_63218616
ENSMUST00000027111.15	chr1	+	2661	19	Genic_Genomic	ENSMUSG00000084799.8	novel	1576	4	NA	NA	28856	18532	multi-exon	FALSE	non_canonical	0	0	junction_1	0	812	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTCCGCCGGAAGTAGC	4284	False	NA	NA	False	NA	NA	NA	63182754	63215981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_chr1_+_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
ENSMUST00000027123.15	chr1	-	2423	12	FSM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	0	0	0	0	multi-exon	FALSE	canonical	2	4506	junction_7	645.86437693097	16899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4455	False	NA	-6	True	AATAAA	-16	NA	55127183	55116993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ENSMUST00000027125.7	chr1	+	1733	5	FSM	ENSMUSG00000025981.14	ENSMUST00000027125.7	1733	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	22.7486263321547	526	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGTTATTTAAATCTTT	3559	False	NA	22	True	AATAAA	-28	NA	55091928	55111861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_55092150_55100433_55100584_55103339_55103533_55106655_55106758_55110794
ENSMUST00000027127.14	chr1	-	6195	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	0	0	0	0	multi-exon	TRUE	canonical	2	1032	junction_2	157.733865172392	1462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAGTATACCAGTTCTT	NA	False	NA	-9	True	AATAAA	-17	NA	55066640	55024327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ENSMUST00000027131.6	chr1	-	5498	10	FSM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_4	21.0736509753792	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	46893206	46846703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
ENSMUST00000027139.15	chr1	+	2953	21	FSM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_5	51.2145243070752	1638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAGCCTTGTGTTTAT	NA	False	NA	8	True	TATAAA	-24	NA	45834325	45862779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ENSMUST00000027153.6	chr1	-	1916	11	FSM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_4	12.5315601582564	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCCCTGGGGAATGAGA	NA	False	NA	-19	True	AATAAA	-29	NA	66902436	66869997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
ENSMUST00000027157.10	chr1	+	2692	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	0	0	0	0	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTTGAATTCTTGAT	NA	False	NA	5	True	ATTAAA	-12	NA	66739989	66758964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ENSMUST00000027178.13	chr1	-	6342	34	FSM	ENSMUSG00000026024.15	ENSMUST00000027178.13	6342	34	0	0	0	0	multi-exon	TRUE	canonical	2	89	junction_12	16.3968238094348	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTCTATGACTGTGGAA	NA	False	NA	2	True	AATAAA	-20	NA	59276390	59202084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ENSMUST00000027193.9	chr1	+	763	3	FSM	ENSMUSG00000026032.9	ENSMUST00000027193.9	763	3	0	0	0	0	multi-exon	FALSE	canonical	3	979	junction_1	90.5	6083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCCCTCTAACCTCA	NA	False	NA	52	True	AATAAA	-20	NA	58625542	58635123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_58625830_58630248_58630409_58634807
ENSMUST00000027198.12	chr1	-	3561	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTAGTTTTGTTTTGA	NA	False	NA	0	True	AATAAA	-23	NA	58544268	58501929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ENSMUST00000027202.9	chr1	+	4939	9	FSM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	80.2616813928041	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTATCTATTTATTTA	5139	False	NA	15	True	ATTAAA	-19	NA	58035129	58065058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ENSMUST00000027213.14	chr1	-	1765	9	FSM	ENSMUSG00000026047.14	ENSMUST00000027213.14	1765	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	107.302653159183	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTGTTTTGTTACAG	NA	False	NA	-7	True	AATAAA	-15	NA	44157925	44146046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ENSMUST00000027215.12	chr1	-	1272	8	FSM	ENSMUSG00000026049.12	ENSMUST00000027215.12	1272	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	186.541782812039	1381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTTGTTTTACTCT	NA	False	NA	0	True	ATTAAA	-20	NA	44141551	44125772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44140626_44140683_44141059_44141118_44141487
ENSMUST00000027256.12	chr1	+	969	6	FSM	ENSMUSG00000026087.12	ENSMUST00000027256.12	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_1	191.904559612324	7726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGTAGTCAGTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	37929557	37937616	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_37929666_37932023_37932105_37933019_37933097_37934410_37934492_37936768_37936916_37937141
ENSMUST00000027257.10	chr1	-	1231	7	FSM	ENSMUSG00000026088.16	ENSMUST00000027257.10	1231	7	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	18.2543754267908	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGATCCACTCACCTG	NA	False	NA	0	True	AATAAA	-19	NA	37929492	37917968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_37918445_37918640_37918702_37920013_37920130_37920779_37920867_37921642_37921780_37924295_37924398_37929240
ENSMUST00000027263.14	chr1	-	3293	8	FSM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_1	6.25316246521123	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCTTAAGTTACTCTTG	686	False	NA	NA	False	AATAAA	-26	NA	53824383	53794664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_53796930_53800140_53800321_53801747_53801797_53803190_53803318_53805079_53805225_53810768_53810982_53815675_53815839_53824232
ENSMUST00000027264.10	chr1	-	2442	6	FSM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	45.94344349306	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTTAATTTTTACCT	NA	False	NA	-2	True	AATAAA	-41	NA	53391911	53383775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_53384139_53385738_53385921_53386173_53387718_53389145_53389222_53390038_53390093_53391688
ENSMUST00000027265.10	chr1	+	1868	8	FSM	ENSMUSG00000026096.15	ENSMUST00000027265.10	1868	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	14.7537611946159	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGCCTTGTGTGTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	53352782	53365502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ENSMUST00000027266.4	chr1	+	1910	4	FSM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	12.7104506432917	679	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTTCCTCTGTTTAA	NA	False	NA	93	True	TATAAA	-8	NA	53336253	53349468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_53336348_53338130_53338312_53344613_53344766_53347985
ENSMUST00000027267.14	chr1	-	3054	13	FSM	ENSMUSG00000026098.14	ENSMUST00000027267.14	3054	13	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	15.4495145554804	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6052	False	NA	NA	False	AATAAA	-18	NA	53336177	53228345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ENSMUST00000027279.12	chr1	-	2838	6	FSM	ENSMUSG00000026107.12	ENSMUST00000027279.12	2838	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	8.25590697622012	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATAGGAGTAACAGAACT	NA	False	NA	-1	True	AATAAA	-32	NA	51517558	51508646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51516983
ENSMUST00000027285.13	chr1	+	1414	6	FSM	ENSMUSG00000026111.16	ENSMUST00000027285.13	1414	6	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	129.498416978741	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTCAGCAAGCGGTAT	NA	False	NA	NA	False	AATGAA	-44	NA	37469250	37478205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_37469575_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ENSMUST00000027286.7	chr1	-	3863	3	FSM	ENSMUSG00000026112.8	ENSMUST00000027286.7	3863	3	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_2	27.5	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTGTTTCAAGATTA	6272	False	NA	-3	True	NA	NA	NA	37469184	37456164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_37459709_37467422_37467507_37468949
ENSMUST00000027297.11	chr1	+	3279	8	FSM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_4	21.365621823817	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTCTCATTGTGACTTC	NA	False	NA	18	True	ATTAAA	-18	NA	34889072	34918661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ENSMUST00000027312.11	chr1	-	1975	14	FSM	ENSMUSG00000026134.12	ENSMUST00000027312.11	1975	14	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_10	82.0868352460372	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGCAAGTGGGAGTC	NA	False	NA	-2	True	AATAAA	-18	NA	33708876	33492890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33701326_33701448_33702857_33702938_33706125_33706230_33707938_33708102_33708704
ENSMUST00000027338.4	chr1	-	683	3	FSM	ENSMUSG00000026154.5	ENSMUST00000027338.4	683	3	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_1	0.5	1686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTATTTTATTTTTA	NA	False	NA	-1	True	AATAAA	-23	NA	24044737	24035019	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_24035442_24042237_24042388_24044626
ENSMUST00000027357.12	chr1	-	1479	10	FSM	ENSMUSG00000026171.13	ENSMUST00000027357.12	1479	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	8.63384096891663	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGTGGTATGACTCTT	NA	False	NA	NA	False	AATAAA	-30	NA	74640556	74632906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_74633562_74633718_74633854_74634367_74634461_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
ENSMUST00000027358.11	chr1	+	1890	8	FSM	ENSMUSG00000026172.13	ENSMUST00000027358.11	1890	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	42.4562199476696	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCTGCCTTCTGA	1142	False	NA	NA	False	NA	NA	NA	74627458	74631602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_74627647_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ENSMUST00000027370.13	chr1	+	2937	10	FSM	ENSMUSG00000026179.15	ENSMUST00000027370.13	2937	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	408.826988068106	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAGGTCTGAGCTCTCA	NA	False	NA	3	True	NA	NA	NA	74324203	74392843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_74324297_74325000_74325170_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
ENSMUST00000027379.10	chr1	+	2549	21	FSM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_5	74.8852455427636	2034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGTGTGAAGTCTCA	322	False	NA	22	True	TATAAA	-28	NA	72346585	72434111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ENSMUST00000027381.13	chr1	-	1186	8	FSM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_5	66.3254191429636	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTATCTTTTAAGGATT	NA	False	NA	-6	True	AATAAA	-19	NA	72323473	72298330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
ENSMUST00000027384.6	chr1	+	2845	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	0	0	0	0	multi-exon	TRUE	canonical	3	576	junction_4	38.3577313661217	1532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTGCTGGCTGA	NA	False	NA	15	True	AATAAA	-15	NA	71596308	71618790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
ENSMUST00000027394.12	chr1	+	1316	9	FSM	ENSMUSG00000026197.13	ENSMUST00000027394.12	1316	9	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_8	17.9304210770411	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGAGTGCTGTTTCTT	2041	False	NA	12	True	AGTAAA	-18	NA	75145298	75148269	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
ENSMUST00000027432.9	chr1	+	3112	25	FSM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	0	0	0	0	multi-exon	FALSE	canonical	3	1352	junction_6	102.249660417801	2125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCTCAATCCACACACCA	NA	False	NA	NA	False	NA	NA	NA	85992340	86066873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ENSMUST00000027464.9	chr1	+	1424	4	FSM	ENSMUSG00000026248.10	ENSMUST00000027464.9	1424	4	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	2.44948974278318	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTTTCTTTAT	NA	False	NA	13	True	AATAAA	-15	NA	79753734	79759162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_79754029_79755574_79756044_79757204_79757384_79758680
ENSMUST00000027475.15	chr1	+	5724	29	FSM	ENSMUSG00000048000.16	ENSMUST00000027475.15	5724	29	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_9	29.4000164861817	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87254724	87378518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ENSMUST00000027478.7	chr1	-	2020	10	FSM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	0	0	0	0	multi-exon	FALSE	canonical	3	1166	junction_5	87.5025220095095	3972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCTGGTAGCACTGGGC	NA	False	NA	1	True	NA	NA	NA	92401582	92366731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ENSMUST00000027492.14	chr1	-	1366	4	FSM	ENSMUSG00000026273.14	ENSMUST00000027492.14	1366	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	7.36357401145817	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGGAGTCTTTTTCTCT	NA	False	NA	1	True	AATAAA	-39	NA	93233637	93228926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_93229518_93230439_93230625_93232329_93232829_93233546
ENSMUST00000027503.14	chr1	-	1003	5	FSM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	0	0	0	0	multi-exon	FALSE	canonical	3	1212	junction_3	505.005136112495	5310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGCTTTGGTTCTGCCCCT	2310	False	NA	-20	True	AATAAA	-24	NA	93729656	93720297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729419
ENSMUST00000027512.13	chr1	+	3130	18	FSM	ENSMUSG00000026289.16	ENSMUST00000027512.13	3130	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	58.4556141318301	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTCTTGATTGTCTTT	7245	False	NA	23	True	AATAAA	-32	NA	87683734	87720150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87702534_87702592_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ENSMUST00000027532.13	chr1	+	2202	12	FSM	ENSMUSG00000026307.13	ENSMUST00000027532.13	2202	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_11	10.6693350656825	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGAAGTGGCCTGGGC	NA	False	NA	15	True	ATTAAA	-24	NA	91226059	91248797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_91226171_91228249_91228363_91230490_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91237518_91237626_91243210_91243248_91244785_91244870_91245313_91245414_91246759_91246836_91247798
ENSMUST00000027534.13	chr1	-	1368	12	FSM	ENSMUSG00000026309.15	ENSMUST00000027534.13	1368	12	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_9	38.9197096809944	396	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGAGTGACTGGTCC	NA	False	NA	-8	True	AATAAA	-18	NA	91326505	91303552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91326372
ENSMUST00000027579.17	chr1	-	2554	13	FSM	ENSMUSG00000026341.17	ENSMUST00000027579.17	2554	13	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_12	606.954190107366	2763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGGTTTTTCTTCGTGC	NA	False	NA	-3	True	AATAAA	-21	NA	125363464	125320641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ENSMUST00000027580.11	chr1	+	2733	16	FSM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	11.5808270669912	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTTAAGCGATGACAT	NA	False	NA	NA	False	TTTAAA	-41	NA	125488752	125523557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_125489022_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
ENSMUST00000027592.6	chr1	+	4113	13	FSM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_2	38.8918550456119	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCATTTTGCTCTTTCC	94	False	NA	NA	False	NA	NA	NA	128171898	128207115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ENSMUST00000027601.11	chr1	-	2910	17	FSM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	0	0	0	0	multi-exon	FALSE	canonical	3	2842	junction_6	235.478734443261	3802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287401	128259326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ENSMUST00000027602.15	chr1	-	2175	16	FSM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	0	0	0	0	multi-exon	FALSE	canonical	3	1712	junction_8	135.919976456737	5157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTGTTGTGTGACTTT	NA	False	NA	-4	True	AATAAA	-14	NA	128345096	128291443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ENSMUST00000027626.13	chr1	+	1889	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_6	29.1985539976821	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGGGACTTTTTTTAA	NA	False	NA	6	True	NA	NA	NA	118249568	118261552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
ENSMUST00000027634.13	chr1	-	569	4	FSM	ENSMUSG00000026385.17	ENSMUST00000027634.13	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	2709	junction_1	24.2532930181083	12223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTTGTCTGGGTGCGT	NA	False	NA	-1	True	ATTAAA	-29	NA	120048808	120041009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_120041264_120044115_120044179_120047624_120047743_120048674
ENSMUST00000027649.14	chr1	-	4733	9	FSM	ENSMUSG00000026398.15	ENSMUST00000027649.14	4733	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	19.824227601599	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTAAATCCTTTATGTT	NA	False	NA	-14	True	AATAAA	-23	NA	136888186	136770308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136887964
ENSMUST00000027655.8	chr1	+	2166	8	FSM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	8.75750407085377	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTATTTATTTCAGTCCT	NA	False	NA	10	True	AATAAA	-16	NA	136343008	136367896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_136343162_136344319_136345135_136347147_136347316_136352532_136352623_136360049_136360302_136361450_136361604_136362243_136362373_136367490
ENSMUST00000027677.8	chr1	+	1823	6	FSM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	35.0884596413123	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTTCCTGTCTGTCT	NA	False	NA	24	True	AATAAA	-17	NA	135656884	135679970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_135657013_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ENSMUST00000027684.11	chr1	+	1713	7	FSM	ENSMUSG00000026426.11	ENSMUST00000027684.11	1713	7	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_3	43.3720980457354	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGTGTATGGTGCTGGT	NA	False	NA	15	True	AATAAA	-19	NA	135074561	135084007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_135074839_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
ENSMUST00000027687.8	chr1	+	1116	7	FSM	ENSMUSG00000026429.10	ENSMUST00000027687.8	1116	7	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_1	158.492902049272	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	False	NA	15	True	AATAAA	-17	NA	134890302	134901900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_134890525_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
ENSMUST00000027693.8	chr1	+	1226	6	FSM	ENSMUSG00000026433.14	ENSMUST00000027693.8	1226	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	27.6506781110337	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGGTTGTGATGCTGGG	NA	False	NA	15	True	ATTAAA	-17	NA	131794977	131800625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_131795149_131795256_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
ENSMUST00000027700.15	chr1	+	3385	15	FSM	ENSMUSG00000026439.15	ENSMUST00000027700.15	3385	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	125.154109083195	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGTATACATGCTTGT	NA	False	NA	9	True	AATAAA	-18	NA	132405172	132433397	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_132405266_132411789_132411816_132412483_132412540_132413185_132413244_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ENSMUST00000027725.11	chr1	+	3408	12	FSM	ENSMUSG00000026455.15	ENSMUST00000027725.11	3408	12	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_1	24.9889231659096	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTTGGATTTATTGT	NA	False	NA	NA	False	NA	NA	NA	134383268	134418756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ENSMUST00000027736.13	chr1	-	4395	17	FSM	ENSMUSG00000116275.2	ENSMUST00000027736.13	4395	17	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_16	98.6493157604248	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	False	NA	-8	True	AATAAA	-12	NA	133589118	133547608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588974
ENSMUST00000027769.6	chr1	-	2449	8	FSM	ENSMUSG00000026492.12	ENSMUST00000027769.6	2449	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	6.92820323027551	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTGTATATGTGTGT	7878	False	NA	NA	False	AATAAA	-15	NA	179373832	179355619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179372462_179372552_179373386
ENSMUST00000027777.12	chr1	+	3873	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	0	0	0	0	multi-exon	FALSE	canonical	3	1402	junction_6	226.960257925668	2970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	3147	False	NA	10	True	ATTAAA	-18	NA	180396493	180428819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ENSMUST00000027781.7	chr1	+	471	4	FSM	ENSMUSG00000026500.7	ENSMUST00000027781.7	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_3	43.5150037981793	1451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTTTACATGAAATCC	NA	False	NA	20	True	ATTAAA	-23	NA	178146694	178150258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_178146774_178149309_178149425_178149506_178149571_178150045
ENSMUST00000027792.6	chr1	+	1367	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	0	0	0	0	multi-exon	FALSE	canonical	3	1020	junction_2	65.5	3683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTATAGGTTTCTTT	NA	False	NA	26	True	AATAAA	-34	NA	181952314	181959972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_181952541_181956248_181956318_181958900
ENSMUST00000027802.9	chr1	+	1580	7	FSM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	0	0	0	0	multi-exon	FALSE	canonical	3	1025	junction_3	51.6120679255884	2130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	16	False	NA	32	True	NA	NA	NA	180731857	180735653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
ENSMUST00000027847.7	chr1	+	787	4	FSM	ENSMUSG00000000544.15	ENSMUST00000027847.7	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	86.0736119067085	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTTTCTTTCTCGGTG	NA	False	NA	NA	False	AATAAA	-20	NA	165957985	165981705	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165981478
ENSMUST00000027863.13	chr1	-	2580	6	FSM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	0	0	0	0	multi-exon	FALSE	canonical	3	1015	junction_5	105.155123508082	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	False	NA	-16	True	AATAAA	-16	NA	164285924	164264677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329
ENSMUST00000027867.7	chr1	+	1909	6	FSM	ENSMUSG00000026578.7	ENSMUST00000027867.7	1909	6	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_1	8.97552226892675	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCATCTTGTAG	NA	False	NA	20	True	AATAAA	-20	NA	164103153	164115416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_164103331_164105742_164105884_164107435_164108384_164109959_164110107_164113809_164113965_164115075
ENSMUST00000027897.8	chr1	-	1680	12	FSM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_3	24.6985126865085	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTTTCTGAATGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	189654560	189612688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_189613064_189614305_189614415_189616020_189616196_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ENSMUST00000027916.13	chr1	+	2200	9	FSM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_6	39.6957176531676	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGCCTTTATTCCTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	185064345	185089974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
ENSMUST00000027931.8	chr1	+	3227	8	FSM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_7	41.1061344049071	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGATGTTTGTATTCT	NA	False	NA	29	True	TATAAA	-40	NA	191553555	191565162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
ENSMUST00000027933.11	chr1	-	4212	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTGGAAGAGTGTGTT	NA	False	NA	-6	True	NA	NA	NA	191307656	191269476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ENSMUST00000027940.6	chr1	+	2246	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	21.6248156769306	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTGCTACCTTTGTCT	NA	False	NA	6	True	AATAAA	-15	NA	191058108	191083111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
ENSMUST00000027941.14	chr1	-	1984	4	FSM	ENSMUSG00000026628.14	ENSMUST00000027941.14	1984	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	6.37704215656966	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTAGTGTGGCACTGGTTT	NA	False	NA	0	True	AATAAA	-23	NA	190915537	190902492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_190903877_190904571_190904680_190909427_190909672_190915289
ENSMUST00000027945.6	chr1	-	1196	10	FSM	ENSMUSG00000026632.18	ENSMUST00000027945.6	1196	10	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	9.99011857466179	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTATTTTTAAAAAAGGAA	NA	False	NA	-4	True	TATAAA	-16	NA	190795102	190778038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_190778518_190781478_190781557_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
ENSMUST00000027961.12	chr2	-	1795	14	FSM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_5	73.9537677425134	3068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGAGTCTTTGTTTTCTT	3942	False	NA	-5	True	ATTAAA	-20	NA	3513851	3489886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ENSMUST00000027965.11	chr2	+	3156	4	FSM	ENSMUSG00000026655.16	ENSMUST00000027965.11	3156	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	8.49836585598797	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTTTGTCTCGTTTGT	944	False	NA	19	True	AATAAA	-25	NA	3714494	3783179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_3714674_3773832_3774017_3779454_3779606_3780537
ENSMUST00000027970.14	chr1	-	1374	6	FSM	ENSMUSG00000026659.14	ENSMUST00000027970.14	1374	6	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_3	62.7917191992702	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTGTTAGATGGTTT	NA	False	NA	-2	True	ATTAAA	-16	NA	170713109	170701756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708598_170712635
ENSMUST00000027975.8	chr2	+	1438	9	FSM	ENSMUSG00000026664.8	ENSMUST00000027975.8	1438	9	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_4	31.960669188864	2003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATATTAAGTCAATTTCT	991	False	NA	9	True	AATAAA	-20	NA	4923829	4943541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_4923956_4927638_4927698_4930408_4930520_4932160_4932330_4933481_4933564_4935523_4935706_4940779_4940930_4942486_4942622_4943117
ENSMUST00000027980.8	chr2	-	3494	20	FSM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_19	72.612354435182	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017602	4995534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ENSMUST00000028000.13	chr1	-	2068	15	FSM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_14	29.0531708199618	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTTATCCAGGATGTT	NA	False	NA	-9	True	AATAAA	-26	NA	169358997	169325879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
ENSMUST00000028004.11	chr1	+	2835	11	FSM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	0	0	0	0	multi-exon	FALSE	canonical	3	593	junction_2	45.3586816386896	2020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTGCCGTCTTAATT	NA	False	NA	6	True	ATTAAA	-18	NA	167177559	167196101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ENSMUST00000028059.9	chr2	-	1546	9	FSM	ENSMUSG00000026727.11	ENSMUST00000028059.9	1546	9	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_5	20.3588893361106	1089	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCACACGTTTCTTCTTG	7043	False	NA	-7	True	AATAAA	-12	NA	13276226	13081822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
ENSMUST00000028062.8	chr2	+	2193	9	FSM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	35.7786161694384	2224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGTGTGTTATTTTA	10	False	NA	14	True	AATAAA	-14	NA	13578762	13587637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ENSMUST00000028083.6	chr2	-	1160	8	FSM	ENSMUSG00000026750.7	ENSMUST00000028083.6	1160	8	0	0	0	0	multi-exon	FALSE	canonical	3	1531	junction_5	118.933011500129	9993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	2213	False	NA	-18	True	AATAAA	-24	NA	38534099	38478047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ENSMUST00000028098.11	chr2	-	4066	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATGAAGCATTTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	48839288	48792835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ENSMUST00000028100.13	chr18	-	3965	14	FSM	ENSMUSG00000024240.14	ENSMUST00000028100.13	3965	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	6.05888266692776	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCAGTGGTCTTTGCC	-18	True	NA	-1	True	AATAAA	-27	NA	6490856	6435952	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ENSMUST00000028105.13	chr2	-	2344	15	FSM	ENSMUSG00000026767.13	ENSMUST00000028105.13	2344	15	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_11	25.5990473355904	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCACTTTTACATTTG	NA	False	NA	-22	True	AATAAA	-19	NA	12424281	12352073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
ENSMUST00000028117.4	chr2	+	4707	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	0	0	0	0	multi-exon	TRUE	canonical	3	665	junction_5	65.7463325738674	2337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATTCCAACTGAAGCAT	7073	False	NA	24	True	AATAAA	-26	NA	23046380	23089272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUST00000028121.15	chr2	+	3630	13	FSM	ENSMUSG00000026781.18	ENSMUST00000028121.15	3630	13	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	26.6993289553627	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGTATTGACTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	22958179	23004525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
ENSMUST00000028129.13	chr2	-	2108	10	FSM	ENSMUSG00000026791.15	ENSMUST00000028129.13	2108	10	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_4	8.32666399786453	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTTCAGTGGAGCCAGA	3950	False	NA	-13	True	AATAAA	-15	NA	32872094	32863001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871896_32871969
ENSMUST00000028132.14	chr2	-	3981	25	FSM	ENSMUSG00000026792.17	ENSMUST00000028132.14	3981	25	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_16	3.79601399131012	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTTTGCATAGATTCT	NA	False	NA	-1	True	AATAAA	-25	NA	32851267	32815227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055
ENSMUST00000028139.11	chr2	+	1254	8	FSM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	14.0393034305954	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGTGTTCTGCTTCTT	NA	False	NA	32	True	AATAAA	-20	NA	29236830	29414805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
ENSMUST00000028148.11	chr2	-	2273	15	FSM	ENSMUSG00000009566.13	ENSMUST00000028148.11	2273	15	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_8	41.2442327446381	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTATTCTCCTAGCTCCC	NA	False	NA	-13	True	AATAAA	-20	NA	32584197	32572620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ENSMUST00000028151.7	chr2	+	869	4	FSM	ENSMUSG00000026810.13	ENSMUST00000028151.7	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	58.5965490072202	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCATCCTTGCTCTG	4773	False	NA	23	True	AATAAA	-24	NA	32460869	32463591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_32460925_32461217_32461308_32462308_32462412_32462970
ENSMUST00000028167.3	chr2	+	5620	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTTGGCATTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	57128393	57260731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ENSMUST00000028199.12	chr2	+	3039	5	FSM	ENSMUSG00000026848.15	ENSMUST00000028199.12	3039	5	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_2	34.4990941910074	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGAGCTTTTCCTTG	NA	False	NA	13	True	AATAAA	-18	NA	30842970	30849027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30843236_30843763_30844030_30845789_30845966_30846459_30846588_30846823
ENSMUST00000028200.9	chr2	-	1401	5	FSM	ENSMUSG00000026849.19	ENSMUST00000028200.9	1401	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	220.841996685413	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGGCTTTGTGTGTCTT	NA	False	NA	-8	True	TTTAAA	-30	NA	30857945	30850638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30851210_30853486_30853615_30853705_30853882_30857101_30857368_30857685
ENSMUST00000028214.15	chr2	-	1810	11	FSM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_5	55.8	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	-10	True	AATAAA	-16	NA	30249328	30234820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUST00000028241.7	chr2	-	2787	7	FSM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	5.5876848714134	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGAGTCTTGTTTCT	NA	False	NA	0	True	AATAAA	-20	NA	35226988	35203997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_35206068_35210342_35210478_35211494_35211699_35213675_35213759_35215325_35215399_35216432_35216537_35226870
ENSMUST00000028251.10	chr2	-	2617	6	FSM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_3	16.6300932047899	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGGTCTTATTGTCT	NA	False	NA	-23	True	AATAAA	-16	NA	36026785	36006090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36026493
ENSMUST00000028278.14	chr2	+	1541	12	FSM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	0	0	0	0	multi-exon	FALSE	canonical	3	1717	junction_5	150.997564426748	6196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCGAGGTCTTTTTG	8547	False	NA	31	True	AATAAA	-17	NA	61542037	61630720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ENSMUST00000028286.12	chr2	-	1489	6	FSM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	292.487674954006	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTAGAGTTCTTTCTCC	9481	False	NA	1	True	TATAAA	-45	NA	26494344	26483068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
ENSMUST00000028328.3	chr2	+	1935	9	FSM	ENSMUSG00000015085.9	ENSMUST00000028328.3	1935	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.69096865730859	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGTGTCCATAGGGTGG	NA	False	NA	NA	False	AATAAA	-19	NA	25285885	25291333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_25286102_25287407_25287526_25288012_25288164_25288302_25288463_25288543_25288772_25289293_25289549_25289628_25289749_25290575_25290711_25290781
ENSMUST00000028332.8	chr2	-	1682	13	FSM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_10	27.0014145719977	1351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9001	False	NA	-17	True	AATAAA	-17	NA	25246371	25242301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
ENSMUST00000028336.7	chr2	+	2548	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTGTAATGGCAAGG	NA	False	NA	24	True	ATTAAA	-17	NA	53082099	53109232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ENSMUST00000028341.11	chr2	+	3004	13	FSM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	48.8355374929182	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGTGGCATCTGTG	NA	False	NA	18	True	ATTAAA	-19	NA	25162489	25175927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ENSMUST00000028342.7	chr2	-	862	3	FSM	ENSMUSG00000026966.7	ENSMUST00000028342.7	862	3	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_2	68	2720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGCTAGCTACCA	NA	False	NA	-6	True	AATAAA	-16	NA	25162428	25161050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_25161594_25161940_25162141_25162309
ENSMUST00000028349.14	chr2	-	1666	8	FSM	ENSMUSG00000026972.16	ENSMUST00000028349.14	1666	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	7.55658923167897	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9317	False	NA	-31	True	AATAAA	-17	NA	24825264	24815363	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_24815689_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
ENSMUST00000028351.9	chr2	+	1666	9	FSM	ENSMUSG00000026975.11	ENSMUST00000028351.9	1666	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	22.9945645751338	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTATGCATCTGTCT	NA	False	NA	36	True	ATTAAA	-39	NA	24852411	24862175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_24852638_24853034_24853169_24853467_24853556_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
ENSMUST00000028382.13	chr2	+	1559	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTTGTTTGGAAGGT	NA	False	NA	12	True	AATAAA	-21	NA	80469159	80489246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ENSMUST00000028408.3	chr2	-	1576	11	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACCCGCGCGCTCCCGGG	NA	False	NA	NA	False	NA	NA	NA	71271966	71219603	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Intergenic_chr2_-_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ENSMUST00000028430.6	chr2	-	655	4	FSM	ENSMUSG00000056436.5	ENSMUST00000028430.6	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	45.146674542232	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCGTTATGTTTATGA	NA	False	NA	1	True	AATAAA	-30	NA	76190794	76184285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_76184581_76186423_76186617_76187916_76187946_76190656
ENSMUST00000028465.14	chr2	-	1812	12	FSM	ENSMUSG00000027071.15	ENSMUST00000028465.14	1812	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	6.62452243717697	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTAGGTGTCTACTCTT	NA	False	NA	NA	False	AATGAA	-1	NA	84865831	84828926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_84829471_84829949_84830028_84830667_84830734_84831000_84831095_84852072_84852210_84852691_84852834_84853497_84853576_84853826_84853921_84854453_84854518_84854725_84854798_84855199_84855336_84865524
ENSMUST00000028469.14	chr2	+	2539	15	FSM	ENSMUSG00000027075.17	ENSMUST00000028469.14	2539	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	14.9196829314671	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTATCTGTGACTG	NA	False	NA	17	True	AATAAA	-19	NA	84669751	84693930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ENSMUST00000028470.10	chr2	+	690	3	FSM	ENSMUSG00000027076.11	ENSMUST00000028470.10	690	3	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_1	17.5	4164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGTGTCTTTACTTGAGA	6417	False	NA	10	True	ATTAAA	-15	NA	84657340	84660557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_84657492_84657942_84658058_84660133
ENSMUST00000028475.9	chr2	-	1912	3	FSM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	30.5	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTATGATTCTTTTTTT	NA	False	NA	-21	True	AATAAA	-17	NA	84557694	84553465	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_84554562_84555872_84556501_84557506
ENSMUST00000028487.10	chr2	-	1492	9	FSM	ENSMUSG00000027082.16	ENSMUST00000028487.10	1492	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	57.5972004527998	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATCATGTTGACTGTCC	NA	False	NA	-7	True	AATAAA	-14	NA	84304518	84263203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286
ENSMUST00000028494.9	chr2	+	2260	4	FSM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	4.49691252107735	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	26	True	AATAAA	-16	NA	69619979	69627567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_69620301_69620629_69620666_69622680_69622836_69625819
ENSMUST00000028509.11	chr2	+	2238	10	FSM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_9	56.2121203045731	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCGTGTACTTCATGTGT	NA	False	NA	38	True	AATAAA	-38	NA	70491919	70522087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ENSMUST00000028517.13	chr2	-	2175	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	4124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTCGTTTCTAAGGGGT	NA	False	NA	-13	True	ATTAAA	-14	NA	73044791	72923144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ENSMUST00000028527.8	chr2	+	3369	17	FSM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_13	41.1567126967157	591	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTGGTTTTCCTGTTTT	1376	False	NA	25	True	ATTAAA	-16	NA	109111082	109172092	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ENSMUST00000028536.13	chr2	-	3337	5	FSM	ENSMUSG00000027122.16	ENSMUST00000028536.13	3337	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	43.6863823176056	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGACTTACTGTTTATTA	NA	False	NA	NA	False	AATAAA	-19	NA	106804769	106792871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804616
ENSMUST00000028551.4	chr2	-	983	5	FSM	ENSMUSG00000027131.4	ENSMUST00000028551.4	983	5	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_3	24.5395089600424	1826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAAGTTCCCCTTCAGT	4997	False	NA	-5	True	AATAAA	-29	NA	112198372	112193355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_112193700_112194136_112194298_112194496_112194651_112197746_112197862_112198163
ENSMUST00000028552.4	chr2	+	2886	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTGCATAGTTT	NA	False	NA	10	True	AATAAA	-20	NA	112209555	112244585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ENSMUST00000028580.12	chr2	+	2070	6	FSM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_3	38.5455574612691	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATCACCATTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	109848161	109875661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_109874531
ENSMUST00000028583.8	chr2	+	4228	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_4	22.349496638627	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGGGTAATGTGGTTG	NA	False	NA	31	True	AGTAAA	-21	NA	109721197	109731348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
ENSMUST00000028584.8	chr2	+	1191	6	FSM	ENSMUSG00000027163.14	ENSMUST00000028584.8	1191	6	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_2	9.72830920561225	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTGGTCGTGGTTCTT	NA	False	NA	29	True	AATAAA	-25	NA	101716597	101731991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_101716665_101725479_101725606_101727384_101727525_101729212_101729248_101730213_101730318_101731272
ENSMUST00000028592.12	chr2	-	1283	11	FSM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	0	0	0	0	multi-exon	FALSE	canonical	3	1722	junction_10	235.400531010446	10954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	2640	False	NA	-16	True	AGTAAA	-17	NA	104847425	104830000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUST00000028595.8	chr2	-	1801	9	FSM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_7	14.7394029729837	390	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTACTCAGAATGGTGTG	NA	False	NA	-9	True	AATAAA	-24	NA	104573223	104552128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_104552464_104553220_104553300_104553383_104553510_104553652_104553796_104554914_104555127_104557466_104557657_104558427_104558556_104560528_104560920_104573026
ENSMUST00000028599.8	chr2	+	2817	21	FSM	ENSMUSG00000027176.9	ENSMUST00000028599.8	2817	21	0	0	0	0	multi-exon	TRUE	canonical	3	179	junction_7	45.0891062231222	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCTGTTTCTTTGTATG	6900	False	NA	19	True	AATAAA	-20	NA	104420867	104495774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_104421048_104439215_104439318_104439435_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
ENSMUST00000028608.13	chr2	-	3879	29	FSM	ENSMUSG00000027185.16	ENSMUST00000028608.13	3879	29	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_25	29.5459474413003	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCTGCAGTGCCTATAA	NA	False	NA	-9	True	AATAAA	-20	NA	103591615	103551600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ENSMUST00000028610.10	chr2	-	2613	13	FSM	ENSMUSG00000027187.11	ENSMUST00000028610.10	2613	13	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_10	47.7368364636321	1725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCTGACTTTGGAGGTTC	NA	False	NA	NA	False	NA	NA	NA	103315505	103284193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
ENSMUST00000028617.7	chr2	-	3736	14	FSM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_1	163.356364354585	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATATTAGCATTTATT	NA	False	NA	44	True	NA	NA	NA	94268481	94242026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ENSMUST00000028619.5	chr2	-	1902	11	FSM	ENSMUSG00000027195.11	ENSMUST00000028619.5	1902	11	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_5	45.0653969249135	2035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTTTTGATAGTGGAA	NA	False	NA	NA	False	AATAAA	-31	NA	93988309	93863033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
ENSMUST00000028635.6	chr2	-	2073	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	0	0	0	0	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTGGTTCTTGATGTG	NA	False	NA	NA	False	AATAAA	-19	NA	125701059	125673521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ENSMUST00000028640.14	chr2	-	2632	8	FSM	ENSMUSG00000057147.14	ENSMUST00000028640.14	2632	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	75.5804747488748	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTGTGAATGTCAGTT	NA	False	NA	-2	True	NA	NA	NA	114485434	114346896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_114348774_114350192_114350281_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
ENSMUST00000028644.11	chr2	-	1824	10	FSM	ENSMUSG00000027215.14	ENSMUST00000028644.11	1824	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	1.4229164972073	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTCTGAAGAGGCGGTA	NA	False	NA	NA	False	ATTAAA	-17	NA	93292847	93249455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475_93260601_93264205_93264279_93267732_93267816_93273713_93273790_93292674
ENSMUST00000028650.9	chr2	+	1392	11	FSM	ENSMUSG00000027222.15	ENSMUST00000028650.9	1392	11	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	17.2869893272368	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGGCTCTGTGTCATC	NA	False	NA	21	True	AATAAA	-21	NA	92205650	92211562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
ENSMUST00000028661.6	chr2	+	2115	7	FSM	ENSMUSG00000027229.6	ENSMUST00000028661.6	2115	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	42.3910367884533	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTTTCTCAAAGTGAT	1945	False	NA	NA	False	AATAAA	-15	NA	122016752	122036878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_122016834_122016944_122017027_122018390_122018531_122021087_122021150_122023712_122023787_122028866_122028956_122035291
ENSMUST00000028672.13	chr2	-	1054	5	FSM	ENSMUSG00000027239.15	ENSMUST00000028672.13	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	1100.19691419309	1695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762642	91760172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762274
ENSMUST00000028694.12	chr2	+	1862	11	FSM	ENSMUSG00000027257.14	ENSMUST00000028694.12	1862	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	20.1345474247622	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCGTCTTTTGATAGC	4750	False	NA	19	True	AATAAA	-16	NA	91087157	91095023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_91087272_91090208_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ENSMUST00000028702.10	chr2	+	2471	10	FSM	ENSMUSG00000027259.16	ENSMUST00000028702.10	2471	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	35.8670384119521	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTGAATTGCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	120970912	120987161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_120971148_120972573_120972785_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ENSMUST00000028730.13	chr2	-	2935	6	FSM	ENSMUSG00000027274.17	ENSMUST00000028730.13	2935	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	104.732802884292	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATACAATCCTTACTA	NA	False	NA	0	True	AATAAA	-20	NA	136733302	136715699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136733198
ENSMUST00000028741.14	chr2	+	1430	5	FSM	ENSMUSG00000027285.14	ENSMUST00000028741.14	1430	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	111.162887242101	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGAATTGAATGTTCC	NA	False	NA	NA	False	TTTAAA	-4	NA	120439863	120450387	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_120440027_120442818_120442912_120446335_120446469_120448353_120448463_120449455
ENSMUST00000028743.10	chr2	+	2658	8	FSM	ENSMUSG00000027287.15	ENSMUST00000028743.10	2658	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	118.449334729914	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGACCAGTAATGCCC	NA	False	NA	10	True	NA	NA	NA	120398171	120431736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_120398243_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ENSMUST00000028752.8	chr2	-	4339	25	FSM	ENSMUSG00000027291.16	ENSMUST00000028752.8	4339	25	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_15	25.6031410833385	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCTTGAGCCTCCCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	120183606	120146941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ENSMUST00000028755.8	chr2	-	3730	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	18.4217263034711	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGCACAGTTCCTAGAC	NA	False	NA	NA	False	AATAAA	-20	NA	119985087	119919655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
ENSMUST00000028768.2	chr2	-	1451	5	FSM	ENSMUSG00000027305.10	ENSMUST00000028768.2	1451	5	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	75.083287088406	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTACCCTCAGCCTTTTTC	NA	False	NA	-6	True	AATAAA	-16	NA	119493279	119485931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493089
ENSMUST00000028780.4	chr2	+	1637	3	FSM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_2	33	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAGTAGGGAAAGCCTC	7152	False	NA	81	True	GATAAA	-13	NA	119181709	119184862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_119182118_119182837_119182874_119183669
ENSMUST00000028783.14	chr2	+	2273	11	FSM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	0	0	0	0	multi-exon	TRUE	canonical	3	163	junction_1	46.3102580429002	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTTTGTTGAGCTC	NA	False	NA	13	True	AATAAA	-1	NA	119067842	119079995	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ENSMUST00000028803.14	chr2	+	1241	8	FSM	ENSMUSG00000027331.16	ENSMUST00000028803.14	1241	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	143.771076538293	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATATTCTGACTAACAC	NA	False	NA	21	True	AATAAA	-14	NA	118644734	118665123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118662033_118662109_118664480
ENSMUST00000028804.15	chr2	+	3089	16	FSM	ENSMUSG00000027330.17	ENSMUST00000028804.15	3089	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	16.6951756171922	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTGTTTGTTATGCA	NA	False	NA	NA	False	AATAAA	-16	NA	131028868	131040415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033642_131033732_131033856_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ENSMUST00000028806.12	chr2	+	2270	7	FSM	ENSMUSG00000027333.19	ENSMUST00000028806.12	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	10.8269211792745	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTCAGTTCAAAGGCTC	NA	False	NA	31	True	AATAAA	-32	NA	131333683	131367103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366662
ENSMUST00000028816.9	chr2	-	1612	4	FSM	ENSMUSG00000027341.11	ENSMUST00000028816.9	1612	4	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_2	26.7332502076846	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTTGTTATTGAT	4870	False	NA	-2	True	TATAAA	-20	NA	132089727	132081411	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089492
ENSMUST00000028817.7	chr2	-	1518	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_1	234.222629137323	9549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGTTGTGCAAAGTTTTC	8225	False	NA	-10	True	AATAAA	-27	NA	132095234	132091081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
ENSMUST00000028820.7	chr2	-	1025	6	FSM	ENSMUSG00000027344.15	ENSMUST00000028820.7	1025	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.68328157299975	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTCGGTTTTGTGTATA	NA	False	NA	NA	False	AATAAA	-21	NA	118087437	118075144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_118075447_118078775_118078873_118080286_118080442_118082119_118082301_118083766_118083900_118087280
ENSMUST00000028831.15	chr2	+	3179	19	FSM	ENSMUSG00000027353.15	ENSMUST00000028831.15	3179	19	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	21.8867032185704	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTTCAGGTCACAAAA	NA	False	NA	2	True	ATTAAA	-14	NA	132658060	132685815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ENSMUST00000028841.14	chr2	+	4145	19	FSM	ENSMUSG00000027363.16	ENSMUST00000028841.14	4145	19	0	0	0	0	multi-exon	TRUE	canonical	3	323	junction_9	42.2163738639668	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAAACCTTGTACAT	3576	False	NA	6	True	ATTAAA	-20	NA	126549262	126601217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ENSMUST00000028848.4	chr2	-	1211	8	FSM	ENSMUSG00000027371.11	ENSMUST00000028848.4	1211	8	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	10.321366781822	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGCTTCCACTGTCTTT	NA	False	NA	-4	True	AATAAA	-19	NA	127286470	127278134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_127278327_127278465_127278554_127278656_127278766_127280032_127280193_127280429_127280490_127282305_127282523_127283793_127284045_127286336
ENSMUST00000028852.13	chr2	+	4481	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	6313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTCCAATAACTTGGC	3967	False	NA	7	True	AATAAA	-18	NA	127429141	127448749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ENSMUST00000028856.3	chr2	-	2006	4	FSM	ENSMUSG00000027377.3	ENSMUST00000028856.3	2006	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	4.54606056566195	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAGTCTATCGCTTTG	NA	False	NA	2	True	AATAAA	-21	NA	127571852	127546305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_127547844_127550756_127550880_127554188_127554357_127571675
ENSMUST00000028858.8	chr2	-	3421	25	FSM	ENSMUSG00000027379.15	ENSMUST00000028858.9	3418	25	0	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_18	145.15221297161	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCTAGTTGTTCTAA	NA	False	NA	-5	True	AATAAA	-18	NA	127673785	127643041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ENSMUST00000028866.9	chr2	-	1624	9	FSM	ENSMUSG00000027387.12	ENSMUST00000028866.9	1624	9	0	0	0	0	multi-exon	FALSE	canonical	2	159	junction_3	33.6115214621415	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTTTCATACTTGATT	NA	False	NA	1	True	AATAAA	-22	NA	128785997	128768187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
ENSMUST00000028880.10	chr2	+	3316	11	FSM	ENSMUSG00000027397.15	ENSMUST00000028880.10	3316	11	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_5	146.125973050652	949	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTGCTTTTTGTTT	NA	False	NA	22	True	AATAAA	-24	NA	129040683	129053536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ENSMUST00000028890.15	chr2	+	946	5	FSM	ENSMUSG00000027405.17	ENSMUST00000028890.15	946	5	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	920.852152899693	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAACCCCAATAAAAACA	NA	False	NA	-4	True	NA	NA	NA	130119076	130121198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ENSMUST00000028892.11	chr2	-	1616	12	FSM	ENSMUSG00000027406.14	ENSMUST00000028892.11	1616	12	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_6	49.1089192551946	4175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	130126467	130121228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ENSMUST00000028909.5	chr2	-	2419	13	FSM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	0	0	0	0	multi-exon	FALSE	canonical	3	1195	junction_10	117.133352305064	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTTCTGACTGTTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	144112492	144092042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ENSMUST00000028910.9	chr2	+	2840	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGTGTATTTATAGGG	NA	False	NA	NA	False	AATAAA	-20	NA	144112819	144123147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ENSMUST00000028911.15	chr2	+	3801	11	FSM	ENSMUSG00000027425.19	ENSMUST00000028911.15	3801	11	0	0	0	0	multi-exon	FALSE	canonical	1	121	junction_10	80.6347319707829	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCACTCAGCTTGTCTTT	NA	False	NA	40	True	NA	NA	NA	144210902	144249596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ENSMUST00000028914.9	chr2	+	4403	9	FSM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	6.30352084156148	2978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTTCTGGTATTAT	597	False	NA	8	True	GATAAA	-24	NA	144369637	144383915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144376218_144376332_144377860_144378005_144378202_144378311_144379085_144379278_144380531
ENSMUST00000028915.6	chr2	-	2170	5	FSM	ENSMUSG00000027428.10	ENSMUST00000028915.6	2170	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	20.0873094266007	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGACTGCTGTGGTGC	NA	False	NA	-9	True	AATAAA	-20	NA	144392789	144384184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_144385930_144386293_144386380_144389913_144390020_144391023_144391067_144392599
ENSMUST00000028916.15	chr2	+	2779	20	FSM	ENSMUSG00000027429.17	ENSMUST00000028916.15	2779	20	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	107.06740569791	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTTTGTCTCATTTT	NA	False	NA	NA	False	AATAAA	-37	NA	144398175	144432669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144398263_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ENSMUST00000028917.7	chr2	+	1350	6	FSM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	0	0	0	0	multi-exon	TRUE	canonical	3	290	junction_5	10.373041983912	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTTTTCTGTAGAAATG	NA	False	NA	NA	False	ATTAAA	-20	NA	144441816	144610678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144442012_144445707_144445799_144459111_144459348_144477677_144477785_144588820_144588994_144610130
ENSMUST00000028921.6	chr2	-	3434	30	Antisense	novelGene_ENSMUSG00000027433.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2436	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCACCACCGCGGGGGAT	NA	False	NA	NA	False	NA	NA	NA	146919920	146854915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr2_-_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ENSMUST00000028928.8	chr2	+	4232	6	FSM	ENSMUSG00000027439.10	ENSMUST00000028928.8	4232	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	11.7983049630021	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTGCTTTGTAAAAG	371	False	NA	NA	False	AATAAA	-18	NA	148522942	148534869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_148523136_148525513_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
ENSMUST00000028938.7	chr2	-	860	3	FSM	ENSMUSG00000027447.7	ENSMUST00000028938.7	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	2071	junction_1	68	12110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGAGTTGTTTCTGT	NA	False	NA	-6	True	ATTAAA	-20	NA	148717496	148713641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_148713964_148714736_148714851_148717072
ENSMUST00000028944.4	chr2	-	3618	14	FSM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_13	14.5093318267649	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGATGTTTTTGGTTGAC	NA	False	NA	-5	True	AATAAA	-27	NA	150510178	150460024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150509804
ENSMUST00000028948.5	chr2	-	1087	7	Antisense	novelGene_ENSMUSG00000027454.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1473	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGCCAAATAGGCTCAACC	NA	False	NA	NA	False	NA	NA	NA	150773200	150751513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr2_-_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801_150767919_150769961_150770037_150772760
ENSMUST00000028949.16	chr2	+	1364	9	FSM	ENSMUSG00000027455.17	ENSMUST00000028949.16	1364	9	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_3	133.71979799192	3747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACCAATTCTGTTATAT	NA	False	NA	19	True	AAGAAA	-1	NA	151336212	151353225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151336333_151338503_151338602_151342634_151342710_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ENSMUST00000028972.9	chr2	-	1273	5	FSM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_2	13.6656503687164	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGTTGTCACCCACC	8639	False	NA	NA	False	AATAAA	-21	NA	152857347	152850809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857153
ENSMUST00000028990.10	chr2	-	1970	14	FSM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	9.02265393460642	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTTCCTTGTCTACTT	5680	False	NA	-15	True	AATAAA	-12	NA	154214639	154177305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600
ENSMUST00000028997.8	chr2	-	1905	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_8	405.788969169937	3270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAGTACGTGGGTAATC	NA	False	NA	-8	True	AATATA	-16	NA	172212426	172198115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212314
ENSMUST00000029005.4	chr2	+	2173	9	FSM	ENSMUSG00000027502.12	ENSMUST00000029005.4	2173	9	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_4	19.7416912902618	1713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGGGTTGGTTTTGCTT	NA	False	NA	16	True	AATAAA	-16	NA	172282475	172311828	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515
ENSMUST00000029014.16	chr2	+	1768	4	FSM	ENSMUSG00000027510.18	ENSMUST00000029014.16	1768	4	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_1	63.0766729200793	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAAGGTGGTTTGAG	NA	False	NA	NA	False	AATAAA	-14	NA	172863694	172876518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_172864064_172864584_172864709_172865119_172865175_172875298
ENSMUST00000029046.9	chr3	+	987	4	FSM	ENSMUSG00000027533.11	ENSMUST00000029046.9	987	4	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	88.411914732499	3579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAAATGGTGTGATTATA	NA	False	NA	NA	False	AATAAA	-14	NA	10077607	10081667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_10077779_10080030_10080204_10080531_10080634_10081126
ENSMUST00000029047.12	chr3	-	2288	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGAGTTTCTTTAGT	NA	False	NA	1	True	ATTAAA	-20	NA	10505147	10483205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ENSMUST00000029060.11	chr2	-	3529	28	FSM	ENSMUSG00000027546.16	ENSMUST00000029060.11	3529	28	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_27	35.3190436202576	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	6623	False	NA	-23	True	GATAAA	-16	NA	168583720	168476357	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
ENSMUST00000029061.12	chr2	-	5073	4	FSM	ENSMUSG00000027547.18	ENSMUST00000029061.12	5073	4	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_3	46.1808040928985	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGGCTTGTGTGTATGCT	NA	False	NA	-17	True	AATAAA	-22	NA	168609121	168590251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_168592381_168594373_168594661_168596353_168598721_168608831
ENSMUST00000029078.9	chr3	+	1788	7	FSM	ENSMUSG00000027562.13	ENSMUST00000029078.9	1788	7	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	9.4339811320566	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCTGATTGTCT	NA	False	NA	11	True	AATAAA	-14	NA	14951487	14965830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
ENSMUST00000029082.9	chr2	-	914	7	FSM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	0	0	0	0	multi-exon	FALSE	canonical	3	3926	junction_1	568.041078326794	17319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	False	NA	-12	True	AATAAA	-17	NA	179684226	179678166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ENSMUST00000029085.9	chr2	+	1510	5	FSM	ENSMUSG00000027569.16	ENSMUST00000029085.9	1510	5	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_3	10.4253297309965	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTAAAAAAAAAAAAAACCT	NA	False	NA	NA	False	ATTAAA	-3	NA	180224504	180228080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180224749_180225193_180225316_180226198_180226281_180226589_180226665_180227093
ENSMUST00000029090.9	chr2	+	1655	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCTTCTAAAAAGTTCT	NA	False	NA	18	True	AATAAA	-29	NA	180351909	180360526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
ENSMUST00000029092.13	chr2	+	2714	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGTGCTTGCTTCAC	4034	False	NA	25	True	NA	NA	NA	180609026	180624319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ENSMUST00000029116.14	chr2	+	3569	7	FSM	ENSMUSG00000027589.15	ENSMUST00000029116.14	3569	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	11.3431330181157	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTGTGTTGAGTATG	NA	False	NA	26	True	AATAAA	-29	NA	181479646	181499254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493378_181493503_181496730
ENSMUST00000029126.15	chr2	+	5159	25	FSM	ENSMUSG00000027598.17	ENSMUST00000029126.15	5159	25	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_8	21.5151351765836	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCCTTTTCGTCTGCT	NA	False	NA	57	True	AATAAA	-17	NA	154975428	155068775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ENSMUST00000029135.15	chr2	+	2931	18	FSM	ENSMUSG00000027605.19	ENSMUST00000029135.15	2931	18	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_8	8.02030295659528	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTTTTAGGTATCTG	2007	False	NA	19	True	AATAAA	-23	NA	155359867	155404666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_155360205_155363900_155364097_155391110_155391203_155391395_155391500_155391718_155391792_155392022_155392099_155392274_155392390_155397773_155397912_155398252_155398424_155398697_155398832_155399016_155399150_155399229_155399287_155399468_155399550_155400510_155400620_155402541_155402611_155402949_155403127_155403665_155403741_155403872
ENSMUST00000029147.16	chr2	-	2051	13	FSM	ENSMUSG00000027618.18	ENSMUST00000029147.16	2051	13	0	0	0	0	multi-exon	TRUE	canonical	3	228	junction_1	23.0952135493242	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTTGAATTTTTGAGC	3106	False	NA	-2	True	AATAAA	-17	NA	155986106	155965558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
ENSMUST00000029149.13	chr2	-	2711	17	FSM	ENSMUSG00000027620.17	ENSMUST00000029149.13	2711	17	0	0	0	0	multi-exon	FALSE	canonical	3	1090	junction_5	453.136943808105	1810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022087	155989168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ENSMUST00000029178.7	chr2	+	2442	16	FSM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_9	43.3601968015214	1477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTCTCTAGTCTTGC	NA	False	NA	NA	False	GGGGCT	-25	NA	157579320	157733534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ENSMUST00000029179.11	chr2	-	3830	8	FSM	ENSMUSG00000027650.13	ENSMUST00000029179.11	3830	8	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	12.5746749055231	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGAGATTTATTTCT	NA	False	NA	-8	True	NA	NA	NA	157870353	157823722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
ENSMUST00000029183.3	chr2	+	2266	4	FSM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_3	16.3571255285137	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGATTCTTTTTGTT	406	False	NA	8	True	AATAAA	-16	NA	158610012	158628557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_158610508_158621764_158621933_158625052_158625178_158627079
ENSMUST00000029214.14	chr3	+	2010	14	FSM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	0	0	0	0	multi-exon	FALSE	canonical	3	1234	junction_9	101.670310666418	4822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGGATTTGTCTGTG	NA	False	NA	23	True	AATAAA	-20	NA	32762655	32781122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ENSMUST00000029252.8	chr3	-	1891	11	FSM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_6	40.0710618776194	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTCTTGAGTTTAGAT	NA	False	NA	-18	True	AATAAA	-19	NA	30702018	30678415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
ENSMUST00000029257.15	chr3	+	4868	30	FSM	ENSMUSG00000037400.18	ENSMUST00000029257.15	4868	30	0	0	0	0	multi-exon	FALSE	canonical	2	274	junction_18	53.5097310762941	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808282	35910425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ENSMUST00000029259.10	chr3	-	2455	19	FSM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_8	26.6884748788316	470	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGAGCTGTAGTTTTTTT	NA	False	NA	NA	False	TATAAA	-28	NA	36054827	36013981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ENSMUST00000029269.12	chr3	+	1617	12	FSM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_11	43.5980892749872	1504	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGAGAGCCGAATGAGT	NA	False	NA	15	True	AATAAA	-23	NA	36606754	36619876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_36606901_36607183_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366_36619446_36619577
ENSMUST00000029270.10	chr3	-	2965	8	FSM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	0	0	0	0	multi-exon	FALSE	canonical	3	973	junction_1	54.4767315990441	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGGTGGGCTGTGTG	NA	False	NA	-7	True	AATAAA	-21	NA	36626299	36619013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ENSMUST00000029277.13	chr3	+	2890	16	FSM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	86.3305276249369	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474446	37633245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ENSMUST00000029315.13	chr3	+	2112	10	FSM	ENSMUSG00000027751.14	ENSMUST00000029315.13	2112	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	207.396560562931	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600243	54636183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_54600281_54600523_54600630_54602543_54602554_54624058_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ENSMUST00000029316.16	chr3	-	1300	11	FSM	ENSMUSG00000027752.16	ENSMUST00000029316.16	1300	11	0	0	0	0	multi-exon	FALSE	canonical	3	1645	junction_10	187.140588863026	5581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCCTTACGTTGTT	NA	False	NA	-12	True	AATAAA	-27	NA	54642814	54636098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ENSMUST00000029344.10	chr3	+	3011	16	FSM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	0	0	0	0	multi-exon	FALSE	canonical	3	661	junction_4	69.2886394407882	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAGGATAAATGACTGC	NA	False	NA	19	True	AATAAA	-20	NA	67490073	67511570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ENSMUST00000029369.5	chr3	+	2364	11	FSM	ENSMUSG00000027794.5	ENSMUST00000029369.5	2364	11	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_8	29.6317397396778	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTGCAAGGAATCTGAT	NA	False	NA	20	True	AATAAA	-22	NA	55089448	55117378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
ENSMUST00000029382.13	chr3	-	1752	10	Antisense	novelGene_ENSMUSG00000027804.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8640	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCGCACCGCCGGAAGC	5380	False	NA	NA	False	NA	NA	NA	79510957	79498671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr3_-_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ENSMUST00000029387.15	chr3	+	2299	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	0	0	0	0	multi-exon	TRUE	canonical	3	611	junction_6	73.3195163601748	2823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58433241	58464922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ENSMUST00000029388.10	chr3	+	1970	2	FSM	ENSMUSG00000027811.10	ENSMUST00000029388.10	1970	2	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	0	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCGTTTCTTTAGACTCA	4369	False	NA	NA	False	AATAAA	-14	NA	79536385	79540127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_79536664_79538435
ENSMUST00000029400.7	chr3	+	3782	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTACAGTCCTTATTTT	NA	False	NA	11	True	TATAAA	-15	NA	63203515	63289044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ENSMUST00000029414.12	chr3	-	2957	5	FSM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_4	56.4225132371822	2536	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTTTCTGTAATTCT	2716	False	NA	-1	True	ATTAAA	-20	NA	65300044	65287075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
ENSMUST00000029435.15	chr3	-	4345	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTATACTGTTTCCTT	NA	False	NA	-1	True	AATAAA	-15	NA	103716760	103707920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
ENSMUST00000029445.13	chr3	+	4470	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	0	0	0	0	multi-exon	FALSE	canonical	3	741	junction_4	34.7870505919787	1716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCCTACTGCCATAGGG	NA	False	NA	26	True	AATAAA	-28	NA	102965600	102975230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ENSMUST00000029446.13	chr3	+	4318	20	FSM	ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	4594.89725408776	2661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	NA	False	NA	22	True	AATAAA	-25	NA	102927741	102965502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUST00000029476.9	chr3	+	2810	5	FSM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_4	8.07774721070176	1217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGTGTGAAGTTCTGT	NA	False	NA	18	True	AATAAA	-17	NA	97808505	97830592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815_97821963_97828431
ENSMUST00000029480.9	chr3	-	3026	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	114.013332553697	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6850	False	NA	-9	True	AATAAA	-18	NA	108819043	108810122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ENSMUST00000029489.15	chr3	-	1707	8	FSM	ENSMUSG00000027890.18	ENSMUST00000029489.15	1707	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	25.3175747621437	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGATGTCTTTTCCTAC	NA	False	NA	-4	True	AATAAA	-20	NA	107952210	107947723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107951952
ENSMUST00000029490.15	chr3	-	3863	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_5	41.8762593094226	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTAGTCGTGTGTCTTT	NA	False	NA	-4	True	ATTAAA	-23	NA	107603876	107570435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ENSMUST00000029515.5	chr3	+	511	3	FSM	ENSMUSG00000027907.5	ENSMUST00000029515.5	511	3	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_1	9.5	5712	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAGAGTCAGTAGATT	NA	False	NA	7	True	AATAAA	-25	NA	93427794	93433594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_93427861_93431357_93431507_93433298
ENSMUST00000029542.12	chr3	-	4337	30	FSM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_21	22.3924035870797	384	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90340836	90298702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ENSMUST00000029546.15	chr3	+	1101	5	FSM	ENSMUSG00000027937.16	ENSMUST00000029546.15	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_4	18.2260116317312	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90138903	90143145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_90139348_90139501_90139540_90139735_90139819_90141229_90141310_90142689
ENSMUST00000029549.16	chr3	+	2230	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	0	0	0	0	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	7113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGGCTTGACTTTGTTA	NA	False	NA	18	True	AATAAA	-21	NA	89986846	90008208	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ENSMUST00000029553.16	chr3	-	3509	29	FSM	ENSMUSG00000042520.17	ENSMUST00000029553.16	3509	29	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	263.472271321105	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3557	False	NA	-9	True	AATAAA	-21	NA	89959772	89907446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ENSMUST00000029563.14	chr3	+	3753	15	FSM	ENSMUSG00000027951.17	ENSMUST00000029563.14	3753	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	36.4602803173032	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCATATGTAGCACAGACA	NA	False	NA	20	True	ATTAAA	-20	NA	89638054	89658713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89638146_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ENSMUST00000029564.12	chr3	+	1194	5	FSM	ENSMUSG00000027952.17	ENSMUST00000029564.12	1194	5	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_1	43.1878165690279	2208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTGGAGACTGATGATT	140	False	NA	21	True	AATAAA	-20	NA	89366424	89376320	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89375820
ENSMUST00000029565.11	chr3	-	1022	6	FSM	ENSMUSG00000027953.14	ENSMUST00000029565.11	1022	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	11.5481600266016	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	-31	True	AATAAA	-17	NA	89177877	89175552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89177692
ENSMUST00000029566.9	chr3	-	1480	5	FSM	ENSMUSG00000027954.10	ENSMUST00000029566.9	1480	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	2.77263412660235	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCTGCCCCACCATG	1666	False	NA	NA	False	AATAAA	-21	NA	89186952	89179039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89179912_89180078_89180130_89180263_89180330_89183436_89183733_89186757
ENSMUST00000029575.12	chr3	+	3000	5	FSM	ENSMUSG00000027963.15	ENSMUST00000029575.12	3000	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	7.08872343937891	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGGTGCTCTGGTGACGTG	19	False	NA	23	True	AATAAA	-34	NA	115801110	115822666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_115801532_115804270_115804346_115817655_115818084_115818973_115819045_115820661
ENSMUST00000029588.10	chr3	-	2121	13	FSM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_6	145.639680948108	1980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	False	NA	-1	True	AATAAA	-17	NA	127346998	127330362	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
ENSMUST00000029610.9	chr3	-	1789	8	FSM	ENSMUSG00000027984.9	ENSMUST00000029610.9	1789	8	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_3	33.5492327841959	4342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCCTGTCTTCTCTGA	NA	False	NA	NA	False	AATAAA	-43	NA	131065750	131027067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131038808_131038936_131042064_131042223_131043451_131043581_131065524
ENSMUST00000029623.11	chr3	-	3014	3	FSM	ENSMUSG00000027995.11	ENSMUST00000029623.11	3014	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	5.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGGTTTCTCTGTTTTTC	NA	False	NA	-1	True	TATAAA	-16	NA	83749074	83743578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_83746097_83748195_83748444_83748826
ENSMUST00000029626.9	chr3	+	1456	7	FSM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_5	8.11206234909197	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGGCACTCTGAGGAT	NA	False	NA	NA	False	AATAAA	-14	NA	129695073	129707752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_129695156_129699114_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
ENSMUST00000029628.11	chr3	+	1749	15	FSM	ENSMUSG00000027998.12	ENSMUST00000029628.11	1749	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	194.977719815598	2435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGTGTTTTATTTCTG	NA	False	NA	24	True	AATAAA	-16	NA	82962838	82979596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977929_82978044_82978496_82978691_82979417
ENSMUST00000029643.15	chr3	-	1271	7	FSM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	0	0	0	0	multi-exon	FALSE	canonical	3	868	junction_6	342.204130113397	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTATTGAACGGAACCTA	NA	False	NA	-1	True	AATAAA	-22	NA	129625045	129618560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624766
ENSMUST00000029650.9	chr3	+	3101	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	13.0213499897497	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGTAGATGTTTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	132797600	132816749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
ENSMUST00000029663.11	chr3	-	1126	7	FSM	ENSMUSG00000028029.12	ENSMUST00000029663.11	1126	7	0	0	0	0	multi-exon	FALSE	canonical	3	854	junction_6	52.4195150259477	5447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTTGCTCATTTTTTG	NA	False	NA	-16	True	AATAAA	-31	NA	132389645	132366259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389553
ENSMUST00000029666.14	chr3	+	2600	12	FSM	ENSMUSG00000028032.14	ENSMUST00000029666.14	2600	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	6.54292880561694	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGTTTGTGTGCATAT	NA	False	NA	7	True	AATAAA	-18	NA	131270528	131349432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_131270745_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
ENSMUST00000029674.8	chr3	-	1599	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	2.62466929133727	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTTCTTTGTGTGGCC	1612	False	NA	NA	False	AATAAA	-14	NA	89245335	89240696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
ENSMUST00000029676.12	chr3	-	2975	23	FSM	ENSMUSG00000028041.18	ENSMUST00000029676.12	2975	23	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_3	32.1478056009843	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCTGGAAGCTGGGT	NA	False	NA	-11	True	AATAAA	-20	NA	89257303	89246946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89247261_89247361_89247487_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ENSMUST00000029679.4	chr3	-	849	3	FSM	ENSMUSG00000028044.7	ENSMUST00000029679.4	849	3	0	0	0	0	multi-exon	FALSE	canonical	3	2335	junction_2	153.5	10036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTGGTTATAAGACTGT	NA	False	NA	-12	True	ATTAAA	-22	NA	89325690	89322778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89323271_89323580_89323709_89325461
ENSMUST00000029684.15	chr3	+	1489	9	FSM	ENSMUSG00000028049.16	ENSMUST00000029684.15	1489	9	0	0	0	0	multi-exon	TRUE	canonical	3	743	junction_2	141.598022585063	2181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	False	NA	18	True	ATTAAA	-22	NA	89084779	89090072	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ENSMUST00000029692.15	chr3	+	1204	6	FSM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	6.67532770731145	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCTTCAACCTGAACT	2217	False	NA	74	True	NA	NA	NA	88624144	88637034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
ENSMUST00000029696.11	chr3	+	2981	14	FSM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_11	33.2047619027415	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAATGTGCATTGTT	8	True	NA	16	True	AATAAA	-16	NA	88593109	88620231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
ENSMUST00000029698.15	chr3	-	668	4	FSM	ENSMUSG00000028062.16	ENSMUST00000029698.15	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	2467	junction_3	160.918889161244	7611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	977	False	NA	-6	True	AATAAA	-14	NA	88460331	88457125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460102
ENSMUST00000029707.13	chr3	+	1630	8	FSM	ENSMUSG00000028069.17	ENSMUST00000029707.13	1630	8	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	22.2417148068898	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTCTTTGTTTTGTTTT	1719	False	NA	36	True	TTTAAA	-25	NA	87950414	87963297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_87950487_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ENSMUST00000029708.8	chr3	-	908	6	FSM	ENSMUSG00000028070.8	ENSMUST00000029708.8	908	6	0	0	0	0	multi-exon	TRUE	canonical	3	839	junction_3	34.2963554915096	2255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965802	87963826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965633
ENSMUST00000029722.7	chr3	-	977	6	FSM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	0	0	0	0	multi-exon	FALSE	canonical	3	3673	junction_2	2509.92074775281	139683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86050009	86045246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049814
ENSMUST00000029726.6	chr3	+	1856	13	FSM	ENSMUSG00000028085.13	ENSMUST00000029726.6	1856	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	49.5044189946716	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGATGCCGTGGGTGC	NA	False	NA	9	True	AATAAA	-13	NA	85481501	85561465	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_85481627_85483170_85483322_85509166_85509281_85511760_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
ENSMUST00000029740.14	chr3	+	2209	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGCTTCAGCGTCTCAA	4795	False	NA	14	True	AATAAA	-21	NA	96634979	96698468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ENSMUST00000029741.9	chr3	-	2390	15	FSM	ENSMUSG00000028099.9	ENSMUST00000029741.9	2390	15	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	23.0394515240839	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGTCAGCACGATAAGGA	NA	False	NA	NA	False	CATAAA	-34	NA	96634944	96618805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
ENSMUST00000029752.15	chr3	-	2400	18	FSM	ENSMUSG00000028107.15	ENSMUST00000029752.15	2400	18	0	0	0	0	multi-exon	FALSE	canonical	1	178	junction_5	104.738626737206	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662183	95647287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ENSMUST00000029754.13	chr3	+	1385	15	FSM	ENSMUSG00000028109.15	ENSMUST00000029754.13	1385	15	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_6	50.4359059821958	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATATTGTGTTTACCTGA	NA	False	NA	NA	False	AATAAA	-11	NA	95466988	95494903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUST00000029759.16	chr3	-	2741	11	FSM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	0	0	0	0	multi-exon	TRUE	canonical	3	213	junction_2	25.8534330408942	639	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTGTTTTCCTTAGA	NA	False	NA	-2	True	AATAAA	-17	NA	123179757	123161945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
ENSMUST00000029770.8	chr3	-	3489	23	FSM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_14	20.5277981251709	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGTGCCTGACCTTTT	7131	False	NA	-1	True	ATTAAA	-22	NA	121608951	121552555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
ENSMUST00000029771.13	chr3	+	1872	6	FSM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	13.6176356244394	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCATTTATATCTTCCACT	NA	False	NA	NA	False	AATAAA	-22	NA	121517185	121528697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_121517452_121518625_121518732_121522985_121523204_121525172_121525352_121526029_121526190_121527754
ENSMUST00000029773.13	chr3	+	2049	7	FSM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	0	0	0	0	multi-exon	FALSE	canonical	3	4254	junction_2	486.023204750098	6846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGGCTGGTTATTTTCT	NA	False	NA	27	True	AATAAA	-27	NA	121220145	121251856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
ENSMUST00000029786.14	chr3	+	1612	7	FSM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	26.1002341411379	3044	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAAGAACTTC	8490	False	NA	NA	False	NA	NA	NA	94350631	94356015	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94355092
ENSMUST00000029804.13	chr3	-	2686	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTTTTTCTAGTTGTA	NA	False	NA	-9	True	ATTAAA	-15	NA	138195276	138164716	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ENSMUST00000029806.13	chr3	-	3083	9	FSM	ENSMUSG00000028159.15	ENSMUST00000029806.13	3083	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	5.49431524395898	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCCAACTTTTATAACA	NA	False	NA	NA	False	ATTAAA	-25	NA	137687306	137636767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_137638951_137641342_137641431_137643497_137643584_137644897_137644961_137646621_137646670_137655407_137655539_137667202_137667337_137671641_137671765_137687079
ENSMUST00000029814.10	chr3	+	3675	17	FSM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_8	25.1755554804656	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCATTGAACACCATGTC	NA	False	NA	11	True	AATAAA	-19	NA	135191371	135277165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ENSMUST00000029817.11	chr3	+	1059	10	FSM	ENSMUSG00000028167.16	ENSMUST00000029817.11	1059	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	15.3099660916801	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTAGTTTTTTTTCTTAA	NA	False	NA	21	True	AATAAA	-31	NA	134987021	135010187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_134987130_134991348_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
ENSMUST00000029825.14	chr3	+	2920	12	FSM	ENSMUSG00000028175.16	ENSMUST00000029825.14	2920	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	20.9260800544746	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTGGACTTTGGTTTA	NA	False	NA	NA	False	TATAAA	-21	NA	159201087	159235213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234641
ENSMUST00000029879.15	chr4	+	2533	16	FSM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	0	0	0	0	multi-exon	TRUE	canonical	3	165	junction_3	27.9629914152418	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGTGTGGTAACGT	-45	True	NA	9	True	AATAAA	-15	NA	15957924	15992589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_15958111_15962310_15962445_15963771_15963921_15964246_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
ENSMUST00000029885.5	chr4	-	5648	16	FSM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	15.541199724889	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATAGCTGTGTTTGGTTT	-13	True	NA	-6	True	AATAAA	-15	NA	19570108	19519253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
ENSMUST00000029891.12	chr4	-	2690	8	FSM	ENSMUSG00000028232.14	ENSMUST00000029891.12	2690	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	11.6233403467474	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAAAACTATTTTTGG	280	False	NA	NA	False	AATAAA	-14	NA	3574853	3549040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570320_3570373_3574703
ENSMUST00000029912.11	chr4	+	2745	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTAACAGACTTAATGTT	7849	False	NA	NA	False	TATAAA	-13	NA	6365649	6396284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ENSMUST00000029915.6	chr4	-	1588	4	FSM	ENSMUSG00000028251.6	ENSMUST00000029915.6	1588	4	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	27.288581250528	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCATGTATTTCTTTAA	-17	True	NA	0	True	AATAAA	-24	NA	21767212	21757381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_21758476_21759369_21759530_21759622_21759794_21767049
ENSMUST00000029920.15	chr3	+	2239	15	FSM	ENSMUSG00000028256.17	ENSMUST00000029920.15	2239	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	27.9021614260419	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAACAGTATAAGTT	NA	False	NA	NA	False	AATAAA	-17	NA	144824380	144859650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_144824544_144829971_144830137_144831853_144831987_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ENSMUST00000029938.10	chr3	+	1455	7	FSM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	21.5129160170246	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTTATAGTATTAAT	NA	False	NA	8	True	AATAAA	-15	NA	142470805	142489367	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_142471050_142477146_142477254_142483951_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
ENSMUST00000029942.8	chr4	+	2379	16	FSM	ENSMUSG00000028274.18	ENSMUST00000029942.8	2379	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_15	78.2297471128044	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTCTTCTGGTTTTG	-19	True	NA	13	True	ATTAAA	-26	NA	33310327	33500914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500298
ENSMUST00000029968.14	chr4	+	1868	20	FSM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	0	0	0	0	multi-exon	TRUE	canonical	3	576	junction_1	51.5992441268264	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTAGTAGTGTGTTTT	-12	True	NA	12	True	AATAGA	-27	NA	34614956	34660167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ENSMUST00000029970.14	chr4	-	2039	8	FSM	ENSMUSG00000028293.15	ENSMUST00000029970.14	2039	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_4	17.6831523646385	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGCAGTTACTTTGT	-21	True	NA	-13	True	AATAAA	-14	NA	34687438	34663256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34687243
ENSMUST00000029972.4	chr4	-	786	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_2	5.5	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGAGTTTTTCTTTT	NA	False	NA	NA	False	AATAAA	-6	NA	34778423	34768663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_34769148_34771257_34771415_34778278
ENSMUST00000029989.11	chr4	+	4154	21	FSM	ENSMUSG00000028309.15	ENSMUST00000029989.11	4154	21	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	16.7996279720713	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTTGTGGTGTTCT	-13	True	NA	5	True	ATTAAA	-17	NA	49632065	49656887	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_49632212_49632364_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ENSMUST00000030003.10	chr4	-	1077	4	FSM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_1	46.9065264352651	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTGTAGTTCTACAGT	-22	True	NA	-1	True	AATAAA	-17	NA	45320629	45316612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_45317029_45317677_45317830_45319549_45319700_45320270
ENSMUST00000030014.9	chr4	+	3010	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	0	0	0	0	multi-exon	TRUE	canonical	3	296	junction_19	36.3529529761015	826	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGAGTCATGGTTTAT	27	False	NA	21	True	AATAAA	-21	NA	46138612	46172403	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ENSMUST00000030018.5	chr4	+	2179	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	0	0	0	0	multi-exon	FALSE	canonical	3	811	junction_3	76.1377698648969	2233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTTTGATGTGTGTGT	NA	False	NA	14	True	NA	NA	NA	46489247	46503632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
ENSMUST00000030028.5	chr4	-	2624	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	0	0	0	0	multi-exon	TRUE	canonical	3	625	junction_9	43.7020339182862	1667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCAGCTTCCAGTTCTTA	20	True	NA	NA	False	AATAAA	-29	NA	48279558	48193322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ENSMUST00000030030.15	chr4	-	3102	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	NA	False	NA	-3	True	ATTAAA	-18	NA	48473459	48430857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ENSMUST00000030090.4	chr4	-	1206	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	45.4718149012465	1872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	False	NA	-1	True	AGTAAA	-18	NA	62438155	62427405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
ENSMUST00000030091.10	chr4	-	1805	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCATACAATGTGCTTT	NA	False	NA	1	True	AATAAA	-22	NA	62443305	62440885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
ENSMUST00000030102.12	chr4	+	4196	22	FSM	ENSMUSG00000028397.14	ENSMUST00000030102.12	4196	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	55.9303502727513	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTCTTCTGTCTGTCA	NA	False	NA	14	True	ATTAAA	-15	NA	74170172	74324097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ENSMUST00000030103.9	chr4	-	741	2	FSM	ENSMUSG00000028398.9	ENSMUST00000030103.9	741	2	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	0	2603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTAGTTCTTTTAATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	75196542	75195590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_75196007_75196217
ENSMUST00000030117.5	chr4	-	2418	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	0	0	0	0	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	3799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTCCATGTTGATGTCC	8535	False	NA	61	True	ACTAAA	-34	NA	40757923	40736541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
ENSMUST00000030127.13	chr4	+	2862	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGGTATTCTTCTTC	-16	True	NA	NA	False	ATTAAA	-31	NA	53826044	53862019	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
ENSMUST00000030128.6	chr4	+	1519	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	3437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATTGTAGTATCGCTTT	0	True	NA	14	True	AATAAA	-16	NA	40948406	40965303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
ENSMUST00000030133.15	chr4	+	4349	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCCTCTTCATTTTT	6045	False	NA	NA	False	AATAAA	-15	NA	40970905	41013871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ENSMUST00000030143.13	chr4	-	4368	29	FSM	ENSMUSG00000028433.15	ENSMUST00000030143.13	4368	29	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_17	84.4073804080362	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	218	False	NA	-6	True	AATAAA	-12	NA	41275135	41194315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ENSMUST00000030145.9	chr4	-	3442	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_1	50.3213113402264	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTTGAGTGACTATATA	1860	False	NA	0	True	AATAAA	-18	NA	41314889	41291299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ENSMUST00000030154.7	chr4	+	845	3	FSM	ENSMUSG00000028443.7	ENSMUST00000030154.7	845	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	26.5	1689	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGATGCTTTCTTGGAC	4	True	NA	32	True	AATAAA	-28	NA	41465150	41480926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_41465181_41477513_41477648_41480245
ENSMUST00000030164.8	chr4	-	3316	17	FSM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	0	0	0	0	multi-exon	FALSE	canonical	2	1390	junction_12	381.614124271823	3453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCGTTCTGGCCACTAT	10011	False	NA	-15	True	AATAAA	-18	NA	43000507	42979962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ENSMUST00000030165.5	chr4	-	2771	14	FSM	ENSMUSG00000028453.11	ENSMUST00000030165.5	2771	14	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_11	17.9578731229673	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTTGTATGTGTGTG	163	False	NA	-6	True	ATTAAA	-16	NA	43010355	43002342	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001
ENSMUST00000030181.12	chr4	+	817	6	FSM	ENSMUSG00000028461.13	ENSMUST00000030181.12	817	6	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_5	16.9162643630324	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	-26	True	NA	14	True	AGTAAA	-45	NA	43493361	43495921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508_43495622_43495696
ENSMUST00000030189.14	chr4	-	3544	17	FSM	ENSMUSG00000028467.16	ENSMUST00000030189.14	3544	17	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	9.51314879522022	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTGGTGTGTCTGAG	-7	True	NA	-1	True	AATAAA	-16	NA	43578873	43566927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570191_43570345_43570449_43570671_43570912_43571188_43571408_43573750_43573867_43574027_43574120_43578015
ENSMUST00000030190.9	chr4	+	1292	9	FSM	ENSMUSG00000028468.16	ENSMUST00000030190.9	1292	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	1.21834929310112	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCAACCCCTGGACTC	10	True	NA	NA	False	AAGAAA	-4	NA	43578957	43583130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_43579008_43579374_43579510_43579886_43580024_43580295_43580380_43580476_43580627_43580863_43581011_43581187_43581316_43581486_43581677_43582859
ENSMUST00000030192.5	chr4	-	610	5	FSM	ENSMUSG00000028470.11	ENSMUST00000030192.5	610	5	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_3	25.1433390781734	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTATCCCTGTCTTA	-12	True	NA	-7	True	AATAAA	-14	NA	43656466	43654228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_43654412_43654512_43654586_43654715_43654821_43654905_43655047_43656358
ENSMUST00000030205.14	chr4	-	842	7	FSM	ENSMUSG00000038172.15	ENSMUST00000030205.14	842	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	86.0905531015647	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGCTCTATTTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	83242426	83177434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_83177704_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ENSMUST00000030206.10	chr4	+	1405	9	FSM	ENSMUSG00000028483.14	ENSMUST00000030206.10	1405	9	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_6	50.2767341819255	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGATTCTTTTCTCCAA	NA	False	NA	18	True	TATAAA	-18	NA	83335960	83371577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277
ENSMUST00000030254.15	chr4	+	1898	4	FSM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_3	48.8011839564939	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGTTGCATTTCATAAA	8215	False	NA	8	True	AATAAA	-20	NA	101504914	101516561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_101505023_101509595_101509672_101513305_101513493_101515034
ENSMUST00000030261.6	chr4	+	958	3	FSM	ENSMUSG00000028536.13	ENSMUST00000030261.6	958	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTTTTTATATTTTTC	8940	False	NA	NA	False	NA	NA	NA	118384439	118387425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_118384535_118386395_118386509_118386675
ENSMUST00000030279.15	chr4	+	3178	11	FSM	ENSMUSG00000028550.16	ENSMUST00000030279.15	3178	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	14.1265707091282	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTTTTGTTTTGGTTTT	NA	False	NA	13	True	NA	NA	NA	99082170	99148024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_99082690_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
ENSMUST00000030288.14	chr4	-	2871	24	FSM	ENSMUSG00000028559.18	ENSMUST00000030288.14	2871	24	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_18	119.667039647815	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	False	NA	-6	True	CATAAA	-20	NA	109059469	108918851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ENSMUST00000030311.11	chr4	+	2139	20	FSM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_8	18.5526129152575	565	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTCCTTTTCCTGTGTT	NA	False	NA	10	True	AATAAA	-11	NA	94502727	94581466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
ENSMUST00000030315.13	chr4	+	5389	22	FSM	ENSMUSG00000028580.16	ENSMUST00000030315.13	5389	22	0	0	0	0	multi-exon	TRUE	canonical	3	218	junction_8	122.217214904643	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390631	130508875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ENSMUST00000030316.7	chr4	+	1322	8	FSM	ENSMUSG00000028581.18	ENSMUST00000030316.7	1322	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	165.980574226047	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAGAAATAGAAACGG	NA	False	NA	NA	False	GATAAA	-20	NA	130643259	130662389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_130643355_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ENSMUST00000030317.14	chr4	-	1817	6	FSM	ENSMUSG00000028583.15	ENSMUST00000030317.14	1817	6	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_2	58.6153563496802	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCCAACATTTGACACT	NA	False	NA	-23	True	AATAAA	-20	NA	143026134	142994000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
ENSMUST00000030320.13	chr4	+	3303	25	FSM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_8	22.4730934798829	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATGTAGCCATTTTTA	3533	False	NA	13	True	NA	NA	NA	108477136	108491320	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ENSMUST00000030326.10	chr4	-	2460	4	FSM	ENSMUSG00000028591.12	ENSMUST00000030326.10	2460	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	9.80929264637478	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGGTTTTGCTT	NA	False	NA	-4	True	AATAAA	-15	NA	144135034	144118243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_144119688_144121144_144121730_144122249_144122573_144134926
ENSMUST00000030340.15	chr4	-	2640	16	FSM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	0	0	0	0	multi-exon	TRUE	canonical	3	305	junction_7	132.795314509043	2024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGGCTTTTACTGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	107975729	107901035	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ENSMUST00000030345.15	chr4	-	2372	5	FSM	ENSMUSG00000028607.17	ENSMUST00000030345.15	2372	5	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	11.5866302262565	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGTTCCTTTTTCCTTA	NA	False	NA	0	True	AATAAA	-18	NA	107780807	107761177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_107761761_107764117_107765423_107769837_107769945_107771460_107771542_107780511
ENSMUST00000030346.13	chr4	+	636	6	FSM	ENSMUSG00000028608.16	ENSMUST00000030346.13	636	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	280.922053246092	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACTCTGGAGGTCTTTG	NA	False	NA	60	True	NA	NA	NA	107747315	107754361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_107747400_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ENSMUST00000030348.6	chr4	+	692	5	FSM	ENSMUSG00000028609.7	ENSMUST00000030348.6	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_1	47.9446295219809	7224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAATATGTGAATTCTC	NA	False	NA	50	True	AATAAA	-35	NA	107736951	107744621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_107737143_107738089_107738149_107740264_107740376_107742113_107742197_107744373
ENSMUST00000030360.11	chr4	-	1755	8	FSM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_4	9.55755924781585	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTTTTGAATTGCAGA	NA	False	NA	-5	True	AATAAA	-20	NA	107110729	107090710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490_107104978_107110471
ENSMUST00000030361.11	chr4	+	1775	8	FSM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	0	0	0	0	multi-exon	FALSE	canonical	3	1513	junction_5	112.332959889567	3789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGAGTGTTGGGCTTTCT	NA	False	NA	15	True	ATTAAA	-27	NA	107035595	107058193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ENSMUST00000030365.6	chr4	-	1498	7	FSM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_3	34.5976877840124	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTCTGTGAGATATTA	NA	False	NA	-8	True	AATAAA	-23	NA	106924065	106913070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
ENSMUST00000030375.9	chr4	-	1996	2	FSM	ENSMUSG00000028629.10	ENSMUST00000030375.9	1996	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGATGTTTGTGTG	NA	False	NA	-9	True	AATAAA	-22	NA	120782202	120778392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_120779894_120781707
ENSMUST00000030381.8	chr4	-	2705	19	FSM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	0	0	0	0	multi-exon	TRUE	canonical	3	663	junction_8	52.1791784782653	2028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	-18	True	AATAAA	-14	NA	120427473	120397064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ENSMUST00000030391.9	chr2	+	2838	7	FSM	ENSMUSG00000028640.12	ENSMUST00000030391.9	2838	7	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_1	51.676611946046	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGACCCTTTTT	NA	False	NA	25	True	AATAAA	-27	NA	172391512	172400542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ENSMUST00000030395.9	chr4	+	733	3	FSM	ENSMUSG00000028643.12	ENSMUST00000030395.9	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_2	4.5	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTTCTTGCTTTAGAG	NA	False	NA	11	True	AATAAA	-14	NA	119052502	119058495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_119052684_119053068_119053219_119058093
ENSMUST00000030401.14	chr4	-	525	3	FSM	ENSMUSG00000028648.14	ENSMUST00000030401.14	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	1318	junction_2	395	10000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGCTTTTGGGTCA	1832	False	NA	-25	True	AATAAA	-17	NA	123611995	123606502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_123606720_123609656_123609875_123611905
ENSMUST00000030404.5	chr4	-	1188	10	FSM	ENSMUSG00000028651.13	ENSMUST00000030404.5	1188	10	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_9	90.3078411481501	2028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	-14	True	AATAAA	-25	NA	123033744	123020907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033694
ENSMUST00000030412.11	chr4	+	2381	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	20.6579282601136	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTGTATAATTTTAAG	NA	False	NA	103	True	ACTAAA	-25	NA	122730034	122752871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ENSMUST00000030417.10	chr4	-	1448	6	FSM	ENSMUSG00000006699.18	ENSMUST00000030417.10	1448	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	708.103664727136	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTGGTGAAGCTTTATTC	NA	False	NA	NA	False	ATTAAA	-23	NA	137085010	137049072	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_137049931_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ENSMUST00000030432.8	chr4	+	1418	9	FSM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_3	79.965617611571	1706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAACGTGTGTTTATGGG	NA	False	NA	NA	False	ATTAAA	-23	NA	135673758	135689928	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_135673852_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
ENSMUST00000030434.5	chr4	+	2525	8	FSM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	34.7786000351964	901	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTTGTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	135648045	135667622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
ENSMUST00000030436.12	chr4	-	1919	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	18.5	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTCTTTTTATGTAAG	NA	False	NA	-2	True	AATAAA	-27	NA	135601161	135598228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_135599766_135600205_135600411_135600984
ENSMUST00000030438.15	chr4	+	2493	7	FSM	ENSMUSG00000028676.18	ENSMUST00000030438.15	2493	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	609.139283470264	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATTCCTTAGTTC	4452	False	NA	14	True	AATAAA	-21	NA	135583188	135595693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_135583603_135585615_135585783_135586152_135586513_135589110_135589189_135590350_135590514_135590833_135590888_135594436
ENSMUST00000030446.15	chr4	-	1489	10	FSM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_9	15.6331398550769	1482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCGGCTCCTTTGTTCCT	NA	False	NA	-8	True	NA	NA	NA	116851610	116847161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
ENSMUST00000030451.10	chr4	-	2090	8	FSM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	11.8252583351856	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	1939	False	NA	0	True	TTTAAA	-42	NA	116664837	116661198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
ENSMUST00000030453.5	chr4	-	2106	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	0	0	0	0	multi-exon	TRUE	canonical	3	184	junction_2	7.07106781186548	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCATGTTTCCTTGAAC	NA	False	NA	NA	False	ACTAAA	-25	NA	116565603	116559475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
ENSMUST00000030455.15	chr4	+	1420	9	Antisense	novelGene_ENSMUSG00000028692.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9423	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCACAGTGCACCGCGCA	NA	False	NA	NA	False	NA	NA	NA	116493706	116508877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr4_+_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
ENSMUST00000030456.14	chr4	-	2520	16	FSM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_15	334.076930594669	2758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCTTTGATGGCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	116485138	116458805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528_116484627_116485086
ENSMUST00000030457.12	chr4	-	2118	14	FSM	ENSMUSG00000028693.16	ENSMUST00000030457.12	2118	14	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	345.747385294336	1363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCTTGTTCTGGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	116484694	116458248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ENSMUST00000030460.15	chr4	+	3588	12	FSM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	28.7128847743677	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTTTTTACTGAAGGAA	NA	False	NA	12	True	AATAAA	-18	NA	116414854	116451079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ENSMUST00000030461.5	chr4	+	2115	9	FSM	ENSMUSG00000028696.13	ENSMUST00000030461.5	2115	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.3698625316241	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACAGTACAAATGGTATT	NA	False	NA	NA	False	AATAAA	-27	NA	116364748	116395440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116364848_116367726_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
ENSMUST00000030471.9	chr4	+	3065	10	FSM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_3	24.5573151707401	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCCTTCTTGATGATT	NA	False	NA	9	True	AATAAA	-17	NA	115932465	115954240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_115932805_115936585_115936673_115937745_115937817_115945643_115946767_115950068_115950330_115952073_115952239_115952329_115952429_115952988_115953112_115953339_115953416_115953519
ENSMUST00000030475.3	chr4	-	2439	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTTTCTTGAGATTTG	NA	False	NA	NA	False	ATTAAA	-38	NA	115911073	115890038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
ENSMUST00000030477.4	chr4	+	2884	4	FSM	ENSMUSG00000028709.4	ENSMUST00000030477.4	2884	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	9.42809041582063	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTGGGAAGTGGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	115685288	115693382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_115685439_115688419_115688887_115690829_115691033_115691318
ENSMUST00000030490.13	chr4	+	5285	17	FSM	ENSMUSG00000028718.17	ENSMUST00000030490.13	5285	17	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_15	11.7923107892389	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTGACTTCTCTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	114857355	114900393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ENSMUST00000030501.15	chr4	+	2960	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	0	0	0	0	multi-exon	FALSE	canonical	3	2261	junction_5	110.190105612981	7372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTCATGATGTCTGTT	NA	False	NA	6	True	NA	NA	NA	118477995	118484973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ENSMUST00000030513.13	chr4	-	930	8	FSM	ENSMUSG00000028741.14	ENSMUST00000030513.13	930	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	364.486667262665	5483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGACTCTTTCTTTTTTTT	5974	False	NA	-12	True	AATAAA	-34	NA	139079609	139074755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_139075114_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
ENSMUST00000030538.5	chr4	+	2120	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	0	0	0	0	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	2556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGTGTTCTTTTAGTTC	NA	False	NA	37	True	NA	NA	NA	138032040	138039939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ENSMUST00000030541.13	chr4	+	3311	13	FSM	ENSMUSG00000028759.14	ENSMUST00000030541.13	3311	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	22.3320895176027	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCCAGTACCTGTCCT	4565	False	NA	42	True	AATAAA	-40	NA	137943937	137970481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_137944052_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUST00000030551.11	chr4	+	2522	12	Antisense	novelGene_ENSMUSG00000028766.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7779	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCCGCCCCGCCCCCGGC	244	False	NA	NA	False	NA	NA	NA	137469043	137523695	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr4_+_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
ENSMUST00000030563.6	chr4	+	1551	5	FSM	ENSMUSG00000028779.17	ENSMUST00000030563.6	1551	5	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	25.1047804212664	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTTCTTGACTGTGTGT	9278	False	NA	25	True	AATAAA	-32	NA	130001348	130021927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ENSMUST00000030583.13	chr4	+	986	6	FSM	ENSMUSG00000028792.15	ENSMUST00000030583.13	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	1917	junction_3	119.822535443046	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGCACTCATCTATGT	2869	False	NA	22	True	ATTAAA	-26	NA	128887016	128902194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826
ENSMUST00000030586.15	chr4	-	879	6	FSM	ENSMUSG00000028795.16	ENSMUST00000030586.15	879	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	6.82934843158555	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTCGGTGCTCTCCTTGT	NA	False	NA	-2	True	ATTAAA	-16	NA	129517740	129513066	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_129513240_129514249_129514273_129514475_129514670_129514776_129514944_129516392_129516581_129517606
ENSMUST00000030610.3	chr4	-	2321	5	FSM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	9.35414346693485	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTCGTGACACTTTTA	NA	False	NA	0	True	AATAAA	-24	NA	129271909	129247420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532
ENSMUST00000030613.11	chr4	-	2940	17	FSM	ENSMUSG00000028809.17	ENSMUST00000030613.11	2940	17	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_4	198.310008257274	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCCCATAAGGGACAAAAG	NA	False	NA	NA	False	TTTAAA	-14	NA	135080447	135049343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ENSMUST00000030622.3	chr4	+	1369	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_5	39.6628149390445	1500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGTCTGTAACTTAAACA	NA	False	NA	NA	False	AATAAA	-24	NA	134658208	134664859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
ENSMUST00000030626.12	chr4	-	1204	7	FSM	ENSMUSG00000028822.12	ENSMUST00000030626.12	1204	7	0	0	0	0	multi-exon	FALSE	canonical	3	544	junction_1	61.5938759582116	3581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTCGTTATACCTT	NA	False	NA	-20	True	ATTAAA	-19	NA	134642335	134625159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640507_134642199
ENSMUST00000030636.11	chr4	+	1060	5	FSM	ENSMUSG00000028832.12	ENSMUST00000030636.11	1060	5	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	251.409029273016	5586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTCTGTTCAGGTAGT	NA	False	NA	11	True	AATAAA	-27	NA	134195630	134201154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200642
ENSMUST00000030642.3	chr4	+	859	6	FSM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	0	0	0	0	multi-exon	FALSE	canonical	3	3349	junction_3	129.102439945959	12860	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTTTGGCCTTA	5380	False	NA	19	True	AATAAA	-21	NA	126571422	126603507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
ENSMUST00000030643.3	chr4	-	4126	11	FSM	ENSMUSG00000028838.12	ENSMUST00000030643.3	4126	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	6.57951365983839	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGGGCTATAAATACGCT	7023	False	NA	0	True	AATAAA	-23	NA	134099869	134083682	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268
ENSMUST00000030644.8	chr4	-	1994	3	FSM	ENSMUSG00000028840.11	ENSMUST00000030644.8	1994	3	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_2	27	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTATCTCTTGCTTT	7668	False	NA	7	True	NA	NA	NA	133972903	133970599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_133972242_133972335_133972399_133972614
ENSMUST00000030651.9	chr4	-	743	3	FSM	ENSMUSG00000028843.9	ENSMUST00000030651.9	743	3	0	0	0	0	multi-exon	FALSE	canonical	3	1437	junction_2	42.5	5992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGTGGTGTCCGGGTC	9226	False	NA	-5	True	ATTAAA	-22	NA	133856100	133854716	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_133855118_133855228_133855397_133855926
ENSMUST00000030660.9	chr4	+	1336	5	FSM	ENSMUSG00000028847.9	ENSMUST00000030660.9	1336	5	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_3	21.2882009573378	1163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGTTTTCCTTCT	7625	False	NA	45	True	AATAAA	-25	NA	126156117	126169676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_126156331_126166470_126166569_126166767_126166868_126167682_126167866_126168934
ENSMUST00000030661.14	chr4	+	1367	5	FSM	ENSMUSG00000028848.14	ENSMUST00000030661.14	1367	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	14.7394029729837	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTTTTTTTAGTGTGTGT	NA	False	NA	41	True	NA	NA	NA	133311672	133319046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_133312181_133313220_133313378_133315810_133315972_133317077_133317209_133318636
ENSMUST00000030665.7	chr4	-	1316	8	FSM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	0	0	0	0	multi-exon	FALSE	canonical	3	2323	junction_4	508.87928082108	7128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCCTCGTCTAGAC	4460	False	NA	NA	False	ATTAAA	-19	NA	133273307	133259852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133263183_133268449_133268528_133273115
ENSMUST00000030669.8	chr4	+	4676	12	FSM	ENSMUSG00000028854.10	ENSMUST00000030669.8	4676	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	11.7922793063796	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCAGGGCTGCTTCCTGGG	157	False	NA	22	True	AATAAA	-23	NA	133097016	133151013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_133098219_133139147_133139609_133142611_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
ENSMUST00000030675.8	chr4	+	937	8	FSM	ENSMUSG00000028861.14	ENSMUST00000030675.8	937	8	0	0	0	0	multi-exon	FALSE	canonical	3	1282	junction_7	51.9186962510439	3430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAATGATGGAAGATGG	NA	False	NA	27	True	AATAAA	-12	NA	125940717	125949325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
ENSMUST00000030696.11	chr4	-	3053	9	FSM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	24.0676130931175	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGTGATTCAGTTG	NA	False	NA	0	True	AATAAA	-19	NA	132649869	132626523	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
ENSMUST00000030698.5	chr4	-	2934	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTGCACTTGATTGT	6093	False	NA	-4	True	AATAAA	-14	NA	132611820	132580811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ENSMUST00000030702.14	chr4	-	2037	7	FSM	ENSMUSG00000028882.14	ENSMUST00000030702.14	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_6	9.9121138007995	1090	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTATGGTCTTGAGTCT	NA	False	NA	-6	True	ATTAAA	-16	NA	132570480	132554239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570367
ENSMUST00000030709.9	chr4	-	2006	8	FSM	ENSMUSG00000028885.9	ENSMUST00000030709.9	2006	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	8.56666534317997	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCGTGAGGGATCACAGC	NA	False	NA	-1	True	AATAAA	-31	NA	132484563	132460276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132461071_132465329_132465464_132465547_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473788_132474003_132484295
ENSMUST00000030724.9	chr4	-	3475	10	FSM	ENSMUSG00000028893.9	ENSMUST00000030724.9	3475	10	0	0	0	0	multi-exon	TRUE	canonical	3	666	junction_4	59.9637750728526	565	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTAATGGGATGTT	NA	False	NA	-31	True	AATAAA	-22	NA	132237812	132219342	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ENSMUST00000030726.13	chr4	-	2278	11	FSM	ENSMUSG00000028896.14	ENSMUST00000030726.13	2278	11	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_9	136.55039362814	1524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTGTTTTTATGCGT	5481	False	NA	-14	True	AATAAA	-17	NA	132073016	132059233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132066513_132066553_132067235_132067318_132072956
ENSMUST00000030730.14	chr4	-	1130	9	FSM	ENSMUSG00000028898.16	ENSMUST00000030730.14	1130	9	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_8	39.2324801663112	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCTTCTTCAACTGTAT	2316	False	NA	0	True	AATAAA	-17	NA	132056849	132039073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
ENSMUST00000030734.5	chr4	+	1820	17	FSM	ENSMUSG00000028902.5	ENSMUST00000030734.5	1820	17	0	0	0	0	multi-exon	FALSE	canonical	3	1027	junction_12	104.342509913266	3606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTATGAATTTTTTGTT	NA	False	NA	51	True	AATAAA	-38	NA	124608568	124626253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ENSMUST00000030738.8	chr4	-	1603	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	0	0	0	0	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	5611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCCTTGTGTGTGTGTG	NA	False	NA	NA	False	TATAAA	-16	NA	124587393	124571952	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ENSMUST00000030742.11	chr4	+	1337	10	FSM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_6	17.6243378301319	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCATGCGTGTGGAGGAA	NA	False	NA	33	True	AATAAA	-33	NA	131570780	131595097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131585212_131588071_131588175_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
ENSMUST00000030747.11	chr4	+	3897	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_8	15.5060472074607	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGGCATTTTTCCGG	NA	False	NA	39	True	AATAAA	-21	NA	141520922	141543287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ENSMUST00000030760.15	chr4	-	1906	8	FSM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_3	45.6883855200484	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATGGATATGTTTTT	8485	False	NA	-10	True	AATAAA	-22	NA	140805668	140793822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ENSMUST00000030769.7	chr5	+	1785	13	FSM	ENSMUSG00000028932.9	ENSMUST00000030769.7	1785	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	502.901056095752	6300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCTTCCAGATCTCTG	NA	False	NA	21	True	AATAAA	-17	NA	21990280	22008785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_21990516_21991647_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
ENSMUST00000030773.12	chr5	-	3247	3	FSM	ENSMUSG00000028933.12	ENSMUST00000030773.12	3247	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	2.5	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATATTTCATATTTTC	NA	False	NA	-12	True	AATACA	-11	NA	25910823	25894809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_25897827_25903248_25903331_25910675
ENSMUST00000030779.10	chr4	+	1425	9	FSM	ENSMUSG00000028937.15	ENSMUST00000030779.10	1425	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	152.008172066504	1478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAAGCCTAGGTGGT	NA	False	NA	12	True	AATAAA	-17	NA	152270662	152356304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_152270843_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ENSMUST00000030795.10	chr5	-	2569	14	FSM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_13	122.348082348837	2566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTGGGTCTCTGAGC	NA	False	NA	-29	True	AATAAA	-21	NA	24782465	24770342	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ENSMUST00000030797.4	chr4	-	2120	5	FSM	ENSMUSG00000028955.4	ENSMUST00000030797.4	2120	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_4	30.2685893295343	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCGTGTTTCTTGGAGTG	NA	False	NA	3	True	AATAAA	-22	NA	151142410	151131756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_151133504_151134451_151134504_151135373_151135533_151140618_151140701_151142330
ENSMUST00000030799.15	chr5	-	1333	3	FSM	ENSMUSG00000028958.16	ENSMUST00000030799.15	1333	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	11	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGTTGCTTGA	NA	False	NA	4	True	ATTAAA	-26	NA	24652852	24650455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_24651272_24651531_24651951_24652754
ENSMUST00000030800.13	chr5	-	1893	10	FSM	ENSMUSG00000028959.15	ENSMUST00000030800.13	1893	10	0	0	0	0	multi-exon	FALSE	canonical	3	1073	junction_9	118.54686003725	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650285	24646036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
ENSMUST00000030805.14	chr4	-	908	7	FSM	ENSMUSG00000028964.15	ENSMUST00000030805.14	908	7	0	0	0	0	multi-exon	FALSE	canonical	3	5402	junction_3	199.85446093484	17730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994383	150981589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ENSMUST00000030811.2	chr4	+	3043	4	FSM	ENSMUSG00000028967.11	ENSMUST00000030811.2	3043	4	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_2	19.3275853524323	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTGTCTTGTCTAAA	3781	False	NA	NA	False	AATAAA	-28	NA	150939529	150953344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_150939729_150949531_150949727_150949820_150949898_150950772
ENSMUST00000030814.11	chr5	-	2059	12	FSM	ENSMUSG00000028969.11	ENSMUST00000030814.11	2059	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	52.4982486917657	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGAAGCCAACCATGCC	NA	False	NA	-11	True	TATAAA	-5	NA	24628528	24623238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_24624461_24624597_24624679_24624780_24624842_24625256_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
ENSMUST00000030816.4	chr4	+	2457	6	FSM	ENSMUSG00000028974.14	ENSMUST00000030816.4	2457	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	2.13541565040626	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCTGCCTTTGTTTGTC	NA	False	NA	6	True	AATAAA	-16	NA	149188602	149205104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228_149202381_149203535
ENSMUST00000030841.10	chr5	+	2966	11	FSM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	4.51220566907139	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGATTTGCTTTGTTTA	NA	False	NA	6	True	ATTAAA	-13	NA	24305602	24365783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24340138_24343303_24343479_24346148_24346292_24354122_24354364_24361887_24362090_24363536_24363635_24364444
ENSMUST00000030842.8	chr4	+	1817	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_3	14.9517743280039	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	False	NA	27	True	NA	NA	NA	149569750	149581125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ENSMUST00000030851.7	chr5	-	1125	3	FSM	ENSMUSG00000028998.7	ENSMUST00000030851.7	1125	3	0	0	0	0	multi-exon	FALSE	canonical	3	3790	junction_2	61.5	31518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTAGTGTAGTCCTAG	NA	False	NA	NA	False	AATAAA	-15	NA	24049159	24043941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_24044827_24046707_24046757_24048968
ENSMUST00000030852.13	chr5	+	3298	15	FSM	ENSMUSG00000028999.16	ENSMUST00000030852.13	3298	15	0	0	0	0	multi-exon	TRUE	canonical	2	56	junction_5	10.4591040315534	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGTATTTCTTTGTGTG	NA	False	NA	4	True	NA	NA	NA	23992708	24025367	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ENSMUST00000030872.12	chr5	-	2103	14	FSM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_10	41.6678895284064	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTAGCTGTGTTCTTTGGT	NA	False	NA	-7	True	AATAAA	-14	NA	22755373	22691486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ENSMUST00000030882.12	chr5	+	1615	13	FSM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	0	0	0	0	multi-exon	TRUE	canonical	3	306	junction_5	33.8430815184827	2228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTTAGTCTGTTATATGT	NA	False	NA	16	True	AATAAA	-18	NA	21942138	21962150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_21942275_21943866_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
ENSMUST00000030886.15	chr4	-	1813	10	FSM	ENSMUSG00000029022.19	ENSMUST00000030886.15	1813	10	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_4	26.1538657058192	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGCCTCTCTTTTTTTT	NA	False	NA	1	True	AATAAA	-29	NA	147953176	147945234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ENSMUST00000030895.12	chr4	+	1598	12	FSM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	6.78354840224641	319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAACAGTGGTGGTTGTTT	NA	False	NA	25	True	TATAAA	-30	NA	154226828	154241273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557_154240750_154240988
ENSMUST00000030901.9	chr4	+	2368	17	FSM	ENSMUSG00000029034.10	ENSMUST00000030901.9	2368	17	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_2	75.0722308430354	1540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCACTGTGTACCGTCA	9960	False	NA	21	True	AATAAA	-21	NA	155954002	155973560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ENSMUST00000030903.12	chr4	-	2413	16	FSM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	0	0	0	0	multi-exon	FALSE	canonical	3	684	junction_5	53.203759265676	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	False	NA	-9	True	AATAAA	-19	NA	155845550	155825097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ENSMUST00000030914.4	chr4	-	1596	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	0	0	0	0	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	2383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCGTCTACACGAGTC	NA	False	NA	-13	True	ATTAAA	-22	NA	155170830	155158566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ENSMUST00000030915.11	chr4	+	1659	14	FSM	ENSMUSG00000029049.15	ENSMUST00000030915.11	1659	14	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_9	6.41927570616156	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGCACCTTTTGTGGG	NA	False	NA	17	True	AATAAA	-18	NA	155171033	155229962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155171139_155171877_155171950_155173942_155174042_155175339_155175451_155176725_155176817_155177518_155177607_155185722_155185820_155186546_155186658_155195384_155195509_155195873_155196047_155213135_155213258_155213339_155213423_155226858_155226903_155229623
ENSMUST00000030931.11	chr4	+	2508	19	FSM	ENSMUSG00000029056.14	ENSMUST00000030931.11	2508	19	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	27.1993100856585	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATAATCTTTTATATAT	NA	False	NA	NA	False	NA	NA	NA	155048579	155065328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
ENSMUST00000030935.10	chr4	-	883	7	FSM	ENSMUSG00000029059.10	ENSMUST00000030935.10	883	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	8.17856276425687	372	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCGTCCTTCCCACAGCA	NA	False	NA	-6	True	ATTAAA	-45	NA	154983567	154980855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_154981055_154981496_154981616_154981805_154981882_154981962_154982027_154982584_154982637_154982932_154983138_154983399
ENSMUST00000030939.14	chr4	+	2946	12	FSM	ENSMUSG00000029063.17	ENSMUST00000030939.14	2946	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	209.806955741906	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	8250	False	NA	34	True	AATAAA	-20	NA	155646834	155675454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155646913_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ENSMUST00000030940.14	chr4	+	3131	12	FSM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	0	0	0	0	multi-exon	FALSE	canonical	3	1763	junction_1	785.626496329864	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575826	155643726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ENSMUST00000030942.13	chr4	+	764	4	FSM	ENSMUSG00000029066.13	ENSMUST00000030942.13	764	4	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_3	66.873013989202	7652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTATTTCCTGGC	NA	False	NA	22	True	AATAAA	-18	NA	155887977	155893288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155888200_155888289_155888401_155891364_155891443_155892935
ENSMUST00000030944.11	chr4	+	2442	11	FSM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_8	247.410205933385	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGCTCTGTGCCATCCT	4625	False	NA	NA	False	ATTAAA	-15	NA	155896945	155909000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ENSMUST00000030968.7	chr5	+	1616	9	FSM	ENSMUSG00000029089.9	ENSMUST00000030968.7	1616	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	8.92941067484299	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTAGTTCTACATATAT	NA	False	NA	13	True	ATTAAA	-21	NA	48529670	48546187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48534416_48534508_48536671_48536807_48537465_48537574_48539128_48539210_48545444
ENSMUST00000030986.15	chr5	-	2981	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	0	0	0	0	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	2820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGGAAAATGACCTGTG	NA	False	NA	-7	True	AATAAA	-21	NA	35263110	35248844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ENSMUST00000030993.8	chr5	-	2580	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	0	0	0	0	multi-exon	FALSE	canonical	3	561	junction_5	32.3241395863834	1508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTCCACTTTAAATGCT	NA	False	NA	0	True	AATAAA	-29	NA	34093757	34055259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ENSMUST00000031002.10	chr5	-	3330	19	FSM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_7	26.3739138796905	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCATGTTCAAGCCAGA	949	False	NA	-13	True	AATAAA	-21	NA	36987997	36964264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ENSMUST00000031008.13	chr5	+	1471	11	FSM	ENSMUSG00000029125.15	ENSMUST00000031008.13	1471	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	31.04834939252	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTATTGCAGTCAGTGAG	NA	False	NA	13	True	AATAAA	-13	NA	38196576	38294161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293698
ENSMUST00000031011.12	chr5	-	1635	7	FSM	ENSMUSG00000029128.13	ENSMUST00000031011.12	1635	7	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_3	45.374980869295	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGGGATTTTCATT	NA	False	NA	-4	True	AATAAA	-14	NA	41865497	41782318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_41783206_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ENSMUST00000031018.10	chr5	-	1042	8	FSM	ENSMUSG00000029136.10	ENSMUST00000031018.10	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	7.57816411992848	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGTGTGGCTACTCATC	NA	False	NA	-31	True	AATAAA	-23	NA	31854971	31781782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31782001_31805064_31805254_31809152_31809245_31817250_31817416_31823062_31823126_31824204_31824269_31830656_31830790_31854853
ENSMUST00000031024.14	chr5	+	478	4	FSM	ENSMUSG00000106918.4	ENSMUST00000031024.14	478	4	0	0	0	0	multi-exon	FALSE	canonical	3	1273	junction_1	440.713814926043	7333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCTCTTAGAGGTAT	NA	False	NA	19	True	AATAAA	-22	NA	31771282	31779988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31771367_31771946_31771966_31773724_31773832_31779720
ENSMUST00000031029.15	chr5	+	2018	15	FSM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	0	0	0	0	multi-exon	TRUE	canonical	3	351	junction_8	24.4791664857432	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTCCCTCTCACTG	NA	False	NA	21	True	ATTAAA	-21	NA	31350570	31356244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ENSMUST00000031034.12	chr5	+	2203	18	FSM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_13	30.9676692663879	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTGTGCTTGCGGC	NA	False	NA	33	True	AATAAA	-21	NA	31398207	31408910	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ENSMUST00000031037.14	chr5	-	2089	8	FSM	ENSMUSG00000029151.15	ENSMUST00000031037.14	2089	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	6.02037357305871	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCAGTCCAATTCCTC	3744	False	NA	0	True	AATAAA	-19	NA	31250959	31243449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31244263_31245300_31245436_31245648_31245755_31245951_31246151_31246662_31246817_31246897_31247045_31247399_31247582_31250606
ENSMUST00000031038.11	chr5	+	1523	9	FSM	ENSMUSG00000029152.14	ENSMUST00000031038.11	1523	9	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_1	106.002063659157	6045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTCTTTTTTTTAAAG	NA	False	NA	14	True	AATACA	-7	NA	73450134	73471412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ENSMUST00000031061.12	chr5	-	3010	14	FSM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_10	48.0023421519305	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCTGTATCTTTTATT	NA	False	NA	2	True	AATAAA	-27	NA	52347856	52307544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ENSMUST00000031073.10	chr5	+	993	7	FSM	ENSMUSG00000029177.10	ENSMUST00000031073.10	993	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	786.892358161733	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGGCAGTCCCGCCATA	9263	False	NA	40	True	AATAAA	-24	NA	30824317	30831753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_30824458_30826342_30826397_30827081_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ENSMUST00000031101.10	chr5	+	2996	11	FSM	ENSMUSG00000029199.12	ENSMUST00000031101.10	2996	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	106.686643962588	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATGGCTGTCCATATCA	6929	False	NA	NA	False	GATAAA	-34	NA	65548882	65568036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_65549017_65549677_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ENSMUST00000031103.14	chr5	-	2550	12	FSM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_10	43.2746370854342	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTCAATTTACGTATG	NA	False	NA	-13	True	AATAAA	-22	NA	65593292	65570563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
ENSMUST00000031117.13	chr5	-	1894	7	FSM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	11.5998084275369	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTATCTCATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-45	NA	69749683	69732343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
ENSMUST00000031131.11	chr5	+	1177	9	FSM	ENSMUSG00000029223.13	ENSMUST00000031131.11	1177	9	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_4	35.1227757302865	6731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTATTTTCTCTT	NA	False	NA	33	True	AATAAA	-22	NA	66833433	66844577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_66833666_66833778_66833791_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ENSMUST00000031143.13	chr5	+	1747	6	FSM	ENSMUSG00000029233.16	ENSMUST00000031143.13	1747	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	4.14728827066554	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCTGGACTGGGTAACAT	NA	False	NA	15	True	AATAAA	-27	NA	76288117	76303326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
ENSMUST00000031145.7	chr5	-	1181	6	FSM	ENSMUSG00000029235.15	ENSMUST00000031145.7	1181	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	18.0554700852678	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGCACCATGTGT	NA	False	NA	NA	False	AATAAA	-31	NA	76479003	76459973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_76460446_76465647_76465857_76466973_76467118_76472152_76472244_76472839_76472961_76478859
ENSMUST00000031160.16	chr5	+	2482	9	FSM	ENSMUSG00000029247.18	ENSMUST00000031160.16	2482	9	0	0	0	0	multi-exon	FALSE	canonical	3	3017	junction_4	215.03720608304	10543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTCGCTGTGTGGTC	286	False	NA	15	True	ATTAAA	-18	NA	77099153	77115352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUST00000031170.10	chr5	-	3192	19	FSM	ENSMUSG00000029253.13	ENSMUST00000031170.10	3192	19	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_10	17.8879399334224	392	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCATCTTGTCTGTGGTG	NA	False	NA	-6	True	ATTAAA	-17	NA	86213442	86159882	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
ENSMUST00000031190.5	chr5	+	3085	3	FSM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	9	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTTATATTTAATGAT	NA	False	NA	NA	False	AATAAA	-21	NA	108416762	108428392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108417676_108423434_108423599_108426384
ENSMUST00000031221.12	chr5	+	2961	12	FSM	ENSMUSG00000029283.18	ENSMUST00000031221.12	2961	12	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_8	37.8828119074671	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	False	NA	10	True	AATAAA	-15	NA	107112187	107132298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ENSMUST00000031243.15	chr5	+	1410	7	FSM	ENSMUSG00000029304.15	ENSMUST00000031243.15	1410	7	0	0	0	0	multi-exon	FALSE	canonical	3	5474	junction_3	341.773032223953	14955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTGGTGGTGTCAATT	NA	False	NA	31	True	AATAAA	-18	NA	104582983	104588916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUST00000031264.12	chr5	-	744	5	FSM	ENSMUSG00000029322.13	ENSMUST00000031264.12	744	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0.82915619758885	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTGTGTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	100720111	100701590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_100701855_100704345_100704462_100707617_100707743_100710490_100710629_100720010
ENSMUST00000031268.8	chr5	+	1420	7	FSM	ENSMUSG00000029326.14	ENSMUST00000031268.8	1420	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	172.72618021983	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTTCATACAGACGT	NA	False	NA	15	True	AATAAA	-15	NA	100187902	100216619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657_100215801_100216154
ENSMUST00000031287.12	chr5	+	1835	7	FSM	ENSMUSG00000029344.16	ENSMUST00000031287.12	1835	7	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	59.7847992571876	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTAGCTTTCTTCTCTT	NA	False	NA	27	True	AATAAA	-37	NA	112424556	112463227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_112424638_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ENSMUST00000031288.14	chr5	+	3560	14	FSM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	15.3503464486856	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAAGTATATGGGTGTT	NA	False	NA	14	True	AATAAA	-16	NA	112474223	112485939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
ENSMUST00000031311.10	chr5	+	3078	7	FSM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_6	17.3052657368277	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGACTTTAAAATTTTC	NA	False	NA	27	True	AATAAA	-24	NA	88912854	88931140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_88913206_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
ENSMUST00000031345.15	chr5	-	1967	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTTTATGGATGAATG	1335	False	NA	NA	False	TATAAA	-18	NA	92110927	92096762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
ENSMUST00000031347.8	chr5	-	1391	4	FSM	ENSMUSG00000029401.9	ENSMUST00000031347.8	1391	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	3.55902608401044	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAACGCATGTGTATCCAA	NA	False	NA	48	True	AATAAA	-24	NA	124616429	124601327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_124601875_124606649_124606755_124607760_124607913_124615842
ENSMUST00000031351.11	chr5	-	1192	5	Antisense	novelGene_ENSMUSG00000029404.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1464	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTCCGGCTCTTCCGGTC	7144	False	NA	NA	False	NA	NA	NA	124256259	124254161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr5_-_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ENSMUST00000031355.10	chr5	+	3898	24	FSM	ENSMUSG00000029407.11	ENSMUST00000031355.10	3898	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	100.480471444838	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATCTCTGTCATTGTTC	NA	False	NA	10	True	AATAAA	-18	NA	92285796	92350654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ENSMUST00000031366.12	chr5	+	6961	64	FSM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_8	72.5550989140863	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTCTTGTGTCATT	NA	False	NA	29	True	AATAAA	-21	NA	123887788	123959656	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ENSMUST00000031383.14	chr5	+	2377	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	0	0	0	0	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	73807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGAGTCATCTCTAGT	342	False	NA	21	True	AATATA	-23	NA	129097132	129101387	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ENSMUST00000031385.7	chr5	-	681	5	FSM	ENSMUSG00000029433.17	ENSMUST00000031385.7	681	5	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_2	56.3493566955294	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCATAACATTATTTCCTT	8965	False	NA	NA	False	NA	NA	NA	123662196	123655648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUST00000031388.13	chr5	-	4235	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_1	30.3840007240653	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGCCCTGCCGGCCTGAC	10000	False	NA	NA	False	AAAAAG	-3	NA	123711101	123666721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ENSMUST00000031419.6	chr5	-	1388	7	FSM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_4	23.7235232534199	396	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTTTAAATTATCTTT	NA	False	NA	-20	True	ATTAAA	-21	NA	122510427	122502642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_122502983_122504376_122504460_122505410_122505583_122505661_122505792_122507579_122507702_122508577_122508637_122509945
ENSMUST00000031420.11	chr5	+	1592	8	FSM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_4	35.5154464814327	1738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGAGGTTTGTAAA	8039	False	NA	NA	False	AATAAA	-42	NA	122510513	122520965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
ENSMUST00000031426.14	chr5	-	2950	19	FSM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	9.90510530540242	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTTTTTACTTCATT	1243	False	NA	NA	False	ATTAAA	-20	NA	122752581	122688266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
ENSMUST00000031435.14	chr5	-	3532	12	FSM	ENSMUSG00000029475.18	ENSMUST00000031435.14	3532	12	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_11	40.2726246663991	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	8594	False	NA	NA	False	TATAAA	-21	NA	123038418	123008730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123038211
ENSMUST00000031445.5	chr5	+	3239	18	FSM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	14.7470013373196	221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTACGCGTGTGTTTCTC	NA	False	NA	10	True	AATAAA	-27	NA	125552877	125594474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ENSMUST00000031472.12	chr5	-	1041	5	FSM	ENSMUSG00000029499.12	ENSMUST00000031472.12	1041	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_4	29.6004645233821	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTTCTCAGCACAGTT	NA	False	NA	4	True	AATAAA	-28	NA	110434052	110422147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_110422495_110425520_110425641_110429062_110429226_110431511_110431620_110433749
ENSMUST00000031481.13	chr5	-	1563	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031481.13	1563	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	204.990146104636	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCCTATTTTCCTTT	NA	False	NA	1	True	ATTAAA	-22	NA	110928525	110921532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928419
ENSMUST00000031483.15	chr5	-	1814	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_5	100.055184773204	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCCTATTTTCCTTT	NA	False	NA	1	True	ATTAAA	-22	NA	110928462	110921532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928105
ENSMUST00000031508.5	chr5	+	1088	2	FSM	ENSMUSG00000029535.5	ENSMUST00000031508.5	1088	2	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	0	1653	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCACTTTATTGAGCAT	2414	False	NA	44	True	AATAAA	-36	NA	115479283	115481628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_115479477_115480733
ENSMUST00000031524.11	chr5	-	1870	10	FSM	ENSMUSG00000029545.14	ENSMUST00000031524.11	1870	10	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_3	13.7822573362984	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	9774	False	NA	-4	True	AATAAA	-18	NA	115257405	115248357	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
ENSMUST00000031531.14	chr5	-	883	3	FSM	ENSMUSG00000029551.14	ENSMUST00000031531.14	883	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	27	1835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAGACATCATGGGCAT	7313	False	NA	-12	True	AATAAA	-31	NA	139812640	139809346	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_139809829_139811882_139812120_139812476
ENSMUST00000031534.9	chr5	-	2640	18	FSM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_17	17.902078903461	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCCAAGGCTCCAAGC	NA	False	NA	1	True	AATAAA	-27	NA	140307307	139994443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ENSMUST00000031536.8	chr5	-	1443	3	FSM	ENSMUSG00000029557.8	ENSMUST00000031536.8	1443	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	12	302	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTACTTGTCTGTTT	3901	False	NA	-5	True	AAAACA	-37	NA	140317653	140313428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_140314536_140316734_140317025_140317607
ENSMUST00000031539.12	chr5	-	2627	11	FSM	ENSMUSG00000029560.13	ENSMUST00000031539.12	2627	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_10	18.7160359050735	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGGTTTCCACGCTGCA	7720	False	NA	-12	True	AATAAA	-14	NA	140375017	140326057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
ENSMUST00000031540.11	chr5	+	2125	7	FSM	ENSMUSG00000041827.16	ENSMUST00000031540.11	2125	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.62167810425171	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGTGGTCCTCATTTGT	7834	False	NA	3	True	NA	NA	NA	115061298	115075971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_115061392_115061468_115061669_115066081_115066365_115067898_115068063_115070781_115071024_115073979_115074128_115074976
ENSMUST00000031560.14	chr5	-	3020	9	FSM	ENSMUSG00000029575.18	ENSMUST00000031560.14	3020	9	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	19.5604032422647	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGTGGCTCATCTCTC	NA	False	NA	2	True	AATAAA	-36	NA	114582121	114569094	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ENSMUST00000031565.15	chr5	+	2675	5	FSM	ENSMUSG00000029581.15	ENSMUST00000031565.15	2675	5	0	0	0	0	multi-exon	FALSE	canonical	3	2634	junction_2	132.012310032057	1996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGTGTGTCTCAGGGG	NA	False	NA	18	True	AATAAA	-18	NA	142946097	142958940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957650
ENSMUST00000031587.13	chr5	+	1985	7	FSM	ENSMUSG00000029591.15	ENSMUST00000031587.13	1985	7	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	117.255656106172	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCCGACTATTCTTCA	NA	False	NA	23	True	AATAAA	-19	NA	114268446	114277384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_114268687_114269379_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
ENSMUST00000031590.12	chr5	+	4010	24	FSM	ENSMUSG00000029594.13	ENSMUST00000031590.12	4010	24	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_16	11.5488606136917	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGATGTCACTCTGTCAC	NA	False	NA	21	True	AATAAA	-31	NA	120254529	120337046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946
ENSMUST00000031599.9	chr5	-	1573	3	FSM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	1.5	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTAGTGTGTTACTTTTT	6315	False	NA	NA	False	ATTAAA	-20	NA	120750654	120747122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_120748028_120749442_120749795_120750338
ENSMUST00000031601.8	chr5	+	3469	4	FSM	ENSMUSG00000055991.16	ENSMUST00000031601.8	3469	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	31.4147877422224	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACTTGAGGTTTCTCTC	1043	False	NA	10	True	ATTAAA	-15	NA	145141477	145158560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145142519_145144385_145144519_145155096_145155694_145156862
ENSMUST00000031606.10	chr5	+	3212	22	FSM	ENSMUSG00000029602.12	ENSMUST00000031606.10	3212	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	8.79651549235584	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGTGACGTGTTAAAATCG	NA	False	NA	11	True	TATAAA	-21	NA	120786886	120817662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_120786976_120787380_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
ENSMUST00000031613.11	chr5	-	1185	4	FSM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_3	88.5023540176569	2692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	False	NA	-18	True	AATAAA	-16	NA	143846657	143839521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846398
ENSMUST00000031617.13	chr5	+	1270	7	FSM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	0	0	0	0	multi-exon	FALSE	canonical	3	7748	junction_1	3319.97705815367	143941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTGACTATAGACTCA	NA	False	NA	NA	False	AATAGA	-23	NA	121342543	121347304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ENSMUST00000031621.11	chr5	-	1769	15	FSM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_9	71.895615943093	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCCTGTTGAGTCCT	NA	False	NA	1	True	AATAAA	-22	NA	143951671	143924726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
ENSMUST00000031625.15	chr5	+	1632	10	FSM	ENSMUSG00000029621.15	ENSMUST00000031625.15	1632	10	0	0	0	0	multi-exon	TRUE	canonical	3	332	junction_5	31.8084545015595	2780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTTTCTTTATACTCT	NA	False	NA	22	True	ATTAAA	-23	NA	145020639	145045571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045186
ENSMUST00000031628.10	chr5	-	3087	9	FSM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	16.4350045634311	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTGCGTCTCATATATA	NA	False	NA	2	True	AATAAA	-30	NA	145103918	145084323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_145085316_145088095_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101870_145102344_145103763
ENSMUST00000031632.9	chr5	-	1967	3	FSM	ENSMUSG00000029627.13	ENSMUST00000031632.9	1967	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	1	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTTGTTTCTTTGTCT	1591	False	NA	NA	False	NA	NA	NA	145138678	145131755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_145133010_145135486_145135611_145138089
ENSMUST00000031637.8	chr6	-	468	4	FSM	ENSMUSG00000029632.8	ENSMUST00000031637.8	468	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4249.68315158776	23750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGTGTCACTATTTAATG	2	True	NA	-12	True	AATAAA	-14	NA	11907449	11900371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_11900591_11905200_11905262_11906018_11906080_11907322
ENSMUST00000031646.8	chr5	+	1126	4	FSM	ENSMUSG00000029641.9	ENSMUST00000031646.8	1126	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.816496580927726	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTGTTTTCTGAATGT	NA	False	NA	NA	False	ATTAAA	-18	NA	146781880	146784536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_146782151_146782469_146782527_146782649_146782730_146783817
ENSMUST00000031692.12	chr5	+	1758	6	FSM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_5	29.6445610525776	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACAGCTTCTTTCTACA	8669	False	NA	29	True	ATTAAA	-24	NA	135197136	135210709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135197453_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
ENSMUST00000031728.5	chr5	-	881	2	FSM	ENSMUSG00000029715.6	ENSMUST00000031728.5	881	2	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	0	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTCGAATGGCCTC	1639	False	NA	-33	True	AATAAA	-19	NA	137500780	137499700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137500342_137500540
ENSMUST00000031731.14	chr5	-	1626	9	FSM	ENSMUSG00000029718.15	ENSMUST00000031731.14	1626	9	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_8	116.165560731225	2087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGTGTCTGAGGTTCTGT	4023	False	NA	-2	True	AATAAA	-21	NA	137609749	137603364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658_137608768_137609498
ENSMUST00000031734.16	chr5	+	3078	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_8	20.6479805391719	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGGTGTGTGCCTGCC	2184	False	NA	25	True	AATAAA	-27	NA	137627382	137639356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ENSMUST00000031736.16	chr5	-	2893	12	FSM	ENSMUSG00000029722.16	ENSMUST00000031736.16	2893	12	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	17.5678142969908	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1764	False	NA	NA	False	NA	NA	NA	137682988	137648724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ENSMUST00000031739.6	chr5	+	956	4	FSM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_1	53.8970211504206	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCGAACTGTTCTTGGGA	NA	False	NA	5	True	AATAAA	-18	NA	137777165	137778372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_137777484_137777563_137777808_137777887_137778025_137778115
ENSMUST00000031766.12	chr6	-	2001	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	0	0	0	0	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	26405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	1567	False	NA	-9	True	AATAAA	-17	NA	7693254	7675168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ENSMUST00000031779.17	chr6	+	3229	7	FSM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_2	154.523730647863	1866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTCTTTTATTCTC	NA	False	NA	118	True	AATAAA	-22	NA	29348104	29376674	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ENSMUST00000031788.9	chr6	-	1825	8	FSM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	0	0	0	0	multi-exon	FALSE	canonical	3	833	junction_5	85.7178570684555	1299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGAGCTTTTTGTTTT	2839	False	NA	-1	True	AATAAA	-20	NA	52617374	52523212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_52524048_52525799_52525957_52533422_52533500_52534763_52534898_52596961_52597084_52599835_52599946_52607173_52607335_52617145
ENSMUST00000031793.8	chr6	-	1676	9	FSM	ENSMUSG00000029780.15	ENSMUST00000031793.8	1676	9	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_8	16.5486970786222	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGTCCAGATCATAT	1204	False	NA	0	True	AATAAA	-26	NA	56900917	56859384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56900656
ENSMUST00000031795.8	chr6	+	3009	10	FSM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_6	57.9369602069757	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGCTTTATGGTATT	NA	False	NA	36	True	CATAAA	-14	NA	56809043	56856343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
ENSMUST00000031810.15	chr6	-	3447	11	FSM	ENSMUSG00000029790.17	ENSMUST00000031810.15	3447	11	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_8	9.18095855561934	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCGTTTGCTATTAATG	NA	False	NA	0	True	ATTAAA	-16	NA	30693748	30653455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
ENSMUST00000031838.9	chr6	-	4345	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGCTTCTGTAGTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	49191891	49062156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ENSMUST00000031841.9	chr6	-	1799	8	FSM	ENSMUSG00000029817.12	ENSMUST00000031841.9	1799	8	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_7	100.796420409392	1414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	4593	False	NA	-8	True	AATAAA	-11	NA	49240964	49220861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
ENSMUST00000031850.10	chr6	-	3400	9	FSM	ENSMUSG00000029826.15	ENSMUST00000031850.10	3400	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	12.2212673238089	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTTGGATTTTTTT	9664	False	NA	-3	True	NA	NA	NA	38331538	38292602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
ENSMUST00000031866.9	chr6	-	3960	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	1737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGCTGCTCATAGAAAAG	4148	False	NA	NA	False	ATTAAA	-15	NA	35516823	35485840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ENSMUST00000031868.5	chr6	-	3427	16	FSM	ENSMUSG00000029843.5	ENSMUST00000031868.5	3427	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	3.05213950460256	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGAGTGAGGTCTACTC	NA	False	NA	NA	False	AATAAA	-16	NA	35285066	35244891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_35245904_35247278_35247417_35248543_35248706_35251850_35251976_35252575_35252674_35253383_35253486_35255171_35255274_35256345_35256466_35257243_35257432_35260173_35260255_35261564_35261605_35264281_35264337_35264688_35264853_35266728_35266866_35278659_35278789_35284292
ENSMUST00000031976.14	chr6	+	2155	15	FSM	ENSMUSG00000029913.15	ENSMUST00000031976.14	2155	15	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	23.473389188611	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGCTCTTGACTTTCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	65755971	65913360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ENSMUST00000031978.9	chr6	-	1107	3	FSM	ENSMUSG00000029918.10	ENSMUST00000031978.9	1107	3	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_2	267.5	5098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTTTGAGACAGTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	39787922	39778737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_39779479_39782304_39782546_39787797
ENSMUST00000031984.9	chr6	+	5168	24	FSM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	41.9367603834104	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTTGTAATGGTTTTT	1727	False	NA	28	True	AATAAA	-30	NA	65019592	65093045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ENSMUST00000031985.13	chr6	-	3046	8	FSM	ENSMUSG00000029922.16	ENSMUST00000031985.13	3046	8	0	0	0	0	multi-exon	FALSE	canonical	3	1453	junction_3	1193.53149458715	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397396	39374737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ENSMUST00000032078.9	chr6	+	2441	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	0	0	0	0	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	16978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTCTGCTGTGATGG	4610	False	NA	16	True	AGTAAA	-18	NA	85428495	85445457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ENSMUST00000032088.14	chr6	+	6199	28	FSM	ENSMUSG00000030016.15	ENSMUST00000032088.14	6199	28	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_24	71.435679050644	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTCATTTAGGGTCCA	NA	False	NA	NA	False	AAGAAA	-41	NA	83891373	83963631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ENSMUST00000032111.11	chr6	-	1419	5	FSM	ENSMUSG00000030035.15	ENSMUST00000032111.11	1419	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	18.4390889145858	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGATTCTGGGTAGAG	NA	False	NA	-7	True	ATTAAA	-17	NA	83098540	83096024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83097752_83097858_83098183
ENSMUST00000032141.14	chr6	+	1464	7	FSM	ENSMUSG00000030060.15	ENSMUST00000032141.14	1464	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	428.702078630629	2693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGCTCTCACCCAGTA	2964	False	NA	44	True	AATAAA	-30	NA	87890916	87913611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
ENSMUST00000032165.16	chr6	-	1675	11	Antisense	novelGene_ENSMUSG00000030079.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3470	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTGGGGGAGGCGAGAA	NA	False	NA	NA	False	NA	NA	NA	88474554	88442390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr6_-_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
ENSMUST00000032168.7	chr6	-	3172	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_2	46.8136802778528	2054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCAGAAAGCTTGTTGT	9095	False	NA	5	True	AATAAA	-39	NA	88495887	88480560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ENSMUST00000032169.8	chr6	-	1845	12	FSM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_10	111.135015794021	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCCTGTTGTTGGGGT	6964	False	NA	-4	True	AATAAA	-21	NA	88818882	88812895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88818750
ENSMUST00000032172.14	chr6	-	1121	8	FSM	ENSMUSG00000030086.17	ENSMUST00000032172.14	1121	8	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_4	25.4486277245203	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCACCCAGTCACTTCTG	NA	False	NA	-5	True	AATAAA	-32	NA	89572634	89360132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89444371_89444456_89544568_89544714_89546324_89546395_89551349_89551573_89572440
ENSMUST00000032175.11	chr6	+	3052	23	FSM	ENSMUSG00000030088.16	ENSMUST00000032175.11	3052	23	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	30.2788691558217	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGTCACTGCTCTG	NA	False	NA	13	True	AATAAA	-23	NA	90527786	90576151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_90527880_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ENSMUST00000032182.5	chr6	-	3634	16	FSM	ENSMUSG00000030094.9	ENSMUST00000032182.5	3634	16	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	18.0017283120878	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGGCTGCAAATTTATT	369	False	NA	0	True	AATAAA	-16	NA	91492870	91466286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ENSMUST00000032183.6	chr6	+	2903	12	FSM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_7	13.7209497779825	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTCGTTTGCTGTTGCA	9688	False	NA	NA	False	AATAAA	-30	NA	91450684	91465445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ENSMUST00000032203.9	chr6	+	4605	36	FSM	ENSMUSG00000030111.10	ENSMUST00000032203.9	4605	36	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	9.3958740402153	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCCTTCATTAACTGAG	NA	False	NA	27	True	AATAAA	-25	NA	121613186	121656186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_121613355_121615234_121615419_121616164_121616322_121616473_121616527_121617943_121617965_121618230_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121625628_121626725_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636373_121636878_121637108_121637801_121637929_121638385_121638508_121639351_121639404_121644073_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121646894_121646970_121647860_121648042_121650425_121650650_121651689_121651909_121652077_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655477_121655520_121656050
ENSMUST00000032211.5	chr6	-	2125	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	0	0	0	0	multi-exon	FALSE	canonical	3	704	junction_1	0	4127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGATTTTGTTAAGGTG	9980	False	NA	NA	False	NA	NA	NA	122587046	122582361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_122584095_122586654
ENSMUST00000032214.14	chr6	+	1451	9	FSM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_8	1260.71298651795	2305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGATTCTGGCTGTACT	NA	False	NA	26	True	AATAAA	-16	NA	124908438	124913107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912564
ENSMUST00000032220.15	chr6	-	1817	8	FSM	ENSMUSG00000030127.16	ENSMUST00000032220.15	1817	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_7	625.057254520393	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942411	124935778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942247
ENSMUST00000032237.8	chr6	-	4345	23	FSM	ENSMUSG00000030138.9	ENSMUST00000032237.8	4345	23	0	0	0	0	multi-exon	FALSE	canonical	2	285	junction_22	59.9717047606688	664	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCTAGTGATTTATT	8285	False	NA	-1	True	ATTAAA	-16	NA	118396435	118360341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ENSMUST00000032264.9	chr6	+	1820	4	FSM	ENSMUSG00000030161.9	ENSMUST00000032264.9	1820	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	5.71547606649408	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGCCTCTTTCTTTTTC	NA	False	NA	34	True	AATAAA	-38	NA	129510122	129519309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_129510500_129514453_129514533_129515532_129515652_129518064
ENSMUST00000032272.13	chr6	-	4184	8	FSM	ENSMUSG00000030168.14	ENSMUST00000032272.13	4184	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	32.1685611510775	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTGTGTTTTTTTTT	7325	False	NA	0	True	AATAAA	-21	NA	119394665	119330110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119394380
ENSMUST00000032283.12	chr6	-	2610	12	FSM	ENSMUSG00000030177.15	ENSMUST00000032283.12	2610	12	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_10	52.5397920824409	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	False	NA	-14	True	AATAAA	-18	NA	120334390	120301283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120334287
ENSMUST00000032307.12	chr6	-	767	5	FSM	ENSMUSG00000030188.13	ENSMUST00000032307.12	767	5	0	0	0	0	multi-exon	FALSE	canonical	2	356	junction_3	64.3059095262636	2740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTAGAATAGGTATTTGC	NA	False	NA	NA	False	AATAAA	-16	NA	131270207	131261350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131270034
ENSMUST00000032326.11	chr6	+	1764	12	FSM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	0	0	0	0	multi-exon	TRUE	canonical	3	485	junction_5	30.2182146373304	1583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTGTGTGTGCACT	6574	False	NA	20	True	ATTAAA	-20	NA	134988574	135000739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
ENSMUST00000032330.16	chr6	+	2721	5	FSM	ENSMUSG00000030208.16	ENSMUST00000032330.16	2721	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	1.6393596310755	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGACTGTTTTCTT	NA	False	NA	7	True	TATAAA	-20	NA	135339928	135360171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
ENSMUST00000032344.12	chr6	-	1193	6	FSM	ENSMUSG00000030220.14	ENSMUST00000032344.12	1193	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	3.18747549010185	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGAGTTGTCTTATGC	5571	False	NA	NA	False	AATAAA	-20	NA	136918754	136900652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_136901325_136903669_136903734_136906609_136906687_136909257_136909342_136910581_136910772_136918648
ENSMUST00000032372.7	chr6	+	2818	5	FSM	ENSMUSG00000030245.11	ENSMUST00000032372.7	2818	5	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_3	45.9911676303179	1368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	False	NA	25	True	AATAAA	-19	NA	142332946	142349584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268
ENSMUST00000032373.12	chr6	-	1304	8	FSM	ENSMUSG00000030246.13	ENSMUST00000239395.2	1304	8	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_1	65.6636450839754	3685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	-4	True	AATAAA	-19	NA	142453683	142435974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
ENSMUST00000032396.13	chr6	+	2319	19	FSM	ENSMUSG00000030263.14	ENSMUST00000032396.13	2319	19	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	13.9594872380979	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTGGAACGCCTGGT	NA	False	NA	17	True	AATAAA	-22	NA	145067464	145120660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_145067833_145083185_145083334_145083907_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ENSMUST00000032398.15	chr6	+	2163	10	FSM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	0	0	0	0	multi-exon	TRUE	canonical	3	600	junction_1	54.2445309298778	1898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	3	True	ATTAAA	-16	NA	113023185	113045234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ENSMUST00000032406.15	chr6	+	1549	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	21.4534379529249	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGTGAAGAGTGAGAGGG	2308	False	NA	14	True	AATAAA	-23	NA	113303932	113311149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ENSMUST00000032409.15	chr6	-	1496	12	FSM	ENSMUSG00000030272.16	ENSMUST00000032409.15	1496	12	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	8.10570659096682	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCGTTTGCTCAAATAGC	5793	False	NA	NA	False	AATAAA	-20	NA	113320945	113311084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_113311370_113311474_113311593_113313134_113313223_113313318_113313398_113314153_113314267_113315071_113315148_113315240_113315368_113316245_113316385_113316467_113316543_113317252_113317385_113318828_113318944_113320796
ENSMUST00000032422.6	chr6	+	2306	10	FSM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	0	0	0	0	multi-exon	TRUE	canonical	3	165	junction_1	17.0945085399441	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTTCAGTCTTAACA	1457	False	NA	13	True	AATAAA	-19	NA	113460257	113470299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ENSMUST00000032429.9	chr6	+	814	4	FSM	ENSMUSG00000030291.13	ENSMUST00000032429.9	814	4	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	35.4902177445498	3554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTTTTTGTTTGTCCTT	NA	False	NA	36	True	AATAAA	-21	NA	146544044	146552100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_146544151_146549662_146549778_146550647_146550749_146551608
ENSMUST00000032441.14	chr6	+	2459	13	FSM	ENSMUSG00000030301.18	ENSMUST00000032441.14	2459	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	9.07683253612673	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTGTCATGTTTTTG	NA	False	NA	17	True	AATAAA	-18	NA	147377368	147534110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_147377558_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
ENSMUST00000032446.12	chr6	-	1661	13	FSM	ENSMUSG00000030304.12	ENSMUST00000032446.12	1661	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	272.167381097246	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACTGGCCCTGTGTTAC	NA	False	NA	29	True	AATAAA	-7	NA	148113605	148082713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148108030_148108174_148113467
ENSMUST00000032457.17	chr6	+	3761	19	FSM	ENSMUSG00000030314.17	ENSMUST00000032457.17	3761	19	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	29.6327313191359	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCTTTTTTTCCTACAG	NA	False	NA	NA	False	TATAAA	-15	NA	114620057	114837575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUST00000032461.12	chr6	-	1168	8	FSM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_6	13.6695699587494	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCACTCTGACTGGCT	NA	False	NA	-34	True	AATAAA	-25	NA	115014837	114981341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
ENSMUST00000032469.13	chr6	-	3614	8	FSM	ENSMUSG00000030322.13	ENSMUST00000032469.13	3614	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	37.2010533096435	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCTTTGGCATTGTGTT	7881	False	NA	NA	False	AATAAA	-21	NA	115830332	115817657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115826694_115827578_115827801_115830097
ENSMUST00000032476.11	chr6	-	3959	10	FSM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	0	0	0	0	multi-exon	FALSE	canonical	3	8407	junction_1	739.604699221896	8411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTATTTTTCCCCCTCTTG	9816	False	NA	-4	True	AATAAA	-29	NA	122719704	122704767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ENSMUST00000032480.14	chr6	+	1629	8	FSM	ENSMUSG00000030330.16	ENSMUST00000032480.14	1629	8	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	19.3527933964298	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	7107	False	NA	6	True	AATAAA	-16	NA	125016798	125026227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUST00000032481.8	chr6	+	584	4	FSM	ENSMUSG00000072770.10	ENSMUST00000032481.8	584	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	54.0514158515349	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATTTTGGAGAGTATT	NA	False	NA	NA	False	NA	NA	NA	125026929	125028510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028323
ENSMUST00000032491.15	chr6	+	2156	10	FSM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	4.54062594260057	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGACCCTGGAAAGAGTG	3776	False	NA	15	True	AATACA	-20	NA	125326685	125339447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_125327026_125333787_125333942_125334275_125334405_125334683_125334834_125335016_125335096_125337459_125337537_125337672_125337787_125338054_125338084_125338261_125338548_125338649
ENSMUST00000032492.9	chr6	-	1228	8	FSM	ENSMUSG00000030342.9	ENSMUST00000032492.9	1228	8	0	0	0	0	multi-exon	FALSE	canonical	3	5197	junction_4	437.363109779412	23999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	9966	False	NA	-10	True	AATAAA	-15	NA	125471754	125437228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUST00000032508.11	chr6	-	2217	10	FSM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	0	0	0	0	multi-exon	FALSE	canonical	3	5250	junction_7	195.172162050601	6020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTGTCAGGCAACCCT	9269	False	NA	-21	True	AATAAA	-16	NA	128415640	128407065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ENSMUST00000032551.8	chr7	-	4199	4	FSM	ENSMUSG00000030393.9	ENSMUST00000032551.8	4199	4	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_1	5.43650214343336	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATATGTATTAAGACTT	NA	False	NA	-6	True	NA	NA	NA	10229321	10221155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_10224936_10226205_10226333_10228416_10228456_10229068
ENSMUST00000032561.9	chr7	-	2215	13	FSM	ENSMUSG00000030403.10	ENSMUST00000032561.9	2215	13	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_9	117.461666323765	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005742	18990853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ENSMUST00000032566.3	chr7	-	2710	7	FSM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	5.82380173655205	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTAAAAACCAAAAA	7204	False	NA	NA	False	NA	NA	NA	18883216	18873626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
ENSMUST00000032573.8	chr7	+	694	3	FSM	ENSMUSG00000030413.8	ENSMUST00000032573.8	694	3	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_2	21	1183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTCCCTCCGGTGAATC	NA	False	NA	6	True	AATAAA	-15	NA	18618604	18624366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_18618899_18623202_18623325_18624088
ENSMUST00000032597.12	chr7	+	1106	5	FSM	ENSMUSG00000030432.13	ENSMUST00000032597.12	1106	5	0	0	0	0	multi-exon	FALSE	canonical	3	3938	junction_1	1160.31525888441	204447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCATGTCCTTTATATT	2693	False	NA	NA	False	NA	NA	NA	4795872	4798065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797182_4797416
ENSMUST00000032627.5	chr7	+	3905	23	FSM	ENSMUSG00000033790.12	ENSMUST00000032627.5	3905	23	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_19	13.708973353728	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCGGTTCAGTTTGGG	NA	False	NA	NA	False	AATATA	-19	NA	55443901	55481425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ENSMUST00000032635.14	chr7	-	3197	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGTTTCCCAGCCC	NA	False	NA	-20	True	AATAAA	-16	NA	55612224	55581034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ENSMUST00000032661.14	chr7	+	2362	5	FSM	ENSMUSG00000055102.16	ENSMUST00000032661.14	2362	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	20.1416856295594	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCACATTCATCCATTGC	2892	False	NA	7	True	AATAAA	-21	NA	43256648	43267709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43256699_43259209_43259403_43261406_43261534_43261970_43262064_43265810
ENSMUST00000032696.7	chr7	+	2324	3	FSM	ENSMUSG00000055305.16	ENSMUST00000032696.7	2324	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTCTGATTTAATTATAA	NA	False	NA	NA	False	NA	NA	NA	23970992	23976252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_23971096_23972672_23972800_23974158
ENSMUST00000032701.14	chr7	-	1620	12	FSM	ENSMUSG00000030491.17	ENSMUST00000032701.14	1620	12	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_6	48.0311538018523	1469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAAATTCTCTTAAAATA	NA	False	NA	-13	True	AATAAA	-33	NA	35237170	35193036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ENSMUST00000032704.12	chr7	-	1857	4	FSM	ENSMUSG00000030493.14	ENSMUST00000032704.12	1857	4	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_2	4.92160768674447	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGATCCACAGGCTATAT	NA	False	NA	NA	False	AATAGA	-24	NA	35096261	35091576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637
ENSMUST00000032705.13	chr7	+	3508	15	FSM	ENSMUSG00000030494.14	ENSMUST00000032705.13	3508	15	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	11.3992928531124	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTCTTTTGCTTT	NA	False	NA	26	True	AATAAA	-26	NA	35033594	35091714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
ENSMUST00000032715.13	chr7	+	2507	16	FSM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	68.5528506579656	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAATGTTTTCATGAA	NA	False	NA	44	True	AATAAA	-28	NA	49428093	49508013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ENSMUST00000032723.9	chr7	+	955	8	FSM	ENSMUSG00000030512.14	ENSMUST00000032723.9	955	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_5	1022.69418095299	2573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGGACTGTGTGCTGTGT	NA	False	NA	16	True	AATAAA	-16	NA	65710291	65724328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65720337_65720414_65720979_65721074_65724069
ENSMUST00000032726.14	chr7	+	908	5	FSM	ENSMUSG00000078681.11	ENSMUST00000032726.14	908	5	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_3	21.6333076527839	1528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACGACAACCCAGAACTTT	NA	False	NA	17	True	AATAAA	-17	NA	65343155	65351650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_65343318_65344890_65345076_65347443_65347619_65348839_65348916_65351340
ENSMUST00000032761.8	chr7	-	2241	3	FSM	ENSMUSG00000030545.10	ENSMUST00000032761.8	2241	3	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCGTCTGTGAGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	79392828	79385704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_79387659_79389912_79390029_79392657
ENSMUST00000032796.14	chr7	+	3376	5	FSM	ENSMUSG00000011427.17	ENSMUST00000032796.14	3376	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	5.78791845139511	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTACACTTTTCACTGCTG	NA	False	NA	NA	False	GATAAA	-24	NA	29515543	29530365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_29515715_29522404_29522570_29524254_29524379_29525116_29525213_29527545
ENSMUST00000032809.10	chr7	+	1111	8	FSM	ENSMUSG00000030588.13	ENSMUST00000032809.10	1111	8	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	365.371993833067	3905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6061	False	NA	12	True	AATAAA	-15	NA	28937777	28946954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28937871_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUST00000032818.13	chr7	+	1958	7	FSM	ENSMUSG00000030598.16	ENSMUST00000032818.13	1958	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	22.6838170411321	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	28416228	28437569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763
ENSMUST00000032820.15	chr13	-	3918	4	FSM	ENSMUSG00000022228.15	ENSMUST00000032820.15	3918	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	8.64098759787715	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCATTATTGAGGATAGT	NA	False	NA	NA	False	AATAAA	-14	NA	21637830	21626349	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_21630000_21631955_21632065_21633610_21633687_21637747
ENSMUST00000032823.5	chr7	-	2611	8	FSM	ENSMUSG00000030602.14	ENSMUST00000032823.5	2611	8	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_7	25.4076960861894	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTATGTGTGTG	NA	False	NA	-5	True	ATTAAA	-19	NA	28267662	28258245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458
ENSMUST00000032824.10	chr7	-	1440	11	FSM	ENSMUSG00000030603.17	ENSMUST00000032824.10	1440	11	0	0	0	0	multi-exon	FALSE	canonical	3	2113	junction_5	109.082033351052	7198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27749526	27741131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ENSMUST00000032825.14	chr7	-	2125	10	FSM	ENSMUSG00000030605.16	ENSMUST00000032825.14	2125	10	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_6	379.595691346581	3287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGTGCCTCCTCATT	NA	False	NA	-6	True	AATACA	-18	NA	78798808	78783516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793137_78794994_78795127_78795369_78795493_78798642
ENSMUST00000032839.13	chr7	-	2269	5	FSM	ENSMUSG00000030610.14	ENSMUST00000032839.13	2269	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	8.89873586527884	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACACTGTCTCTTCCTTGA	NA	False	NA	-3	True	AATAAA	-18	NA	78497011	78477221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_78477861_78483858_78484051_78489752_78489941_78492919_78494013_78496854
ENSMUST00000032840.5	chr7	+	1056	6	FSM	ENSMUSG00000030611.11	ENSMUST00000032840.5	1056	6	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_2	39.2153031353833	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	78432866	78442737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384_78440515_78441621_78441688_78442389
ENSMUST00000032841.7	chr7	-	1134	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_2	24.7296493213219	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGACCTACTGGGC	NA	False	NA	NA	False	AGTAAA	-18	NA	78432837	78424983	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
ENSMUST00000032842.13	chr7	+	1596	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	17.8658193207029	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTGTAAATGTGTTAT	NA	False	NA	10	True	AATAAA	-18	NA	92210356	92231502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
ENSMUST00000032843.9	chr7	-	2259	5	FSM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	24.1389208540896	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGCATGGAGGTCCCTG	6020	False	NA	NA	False	NA	NA	NA	90125209	90116645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805_90121928_90125102
ENSMUST00000032844.7	chr7	-	799	5	FSM	ENSMUSG00000030615.13	ENSMUST00000032844.7	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_4	32.5297940356222	2374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAACATTAAAATACTT	1645	False	NA	NA	False	AATAAA	-19	NA	90106437	90099907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_90100144_90100750_90100866_90101914_90102109_90104631_90104728_90106279
ENSMUST00000032865.17	chr7	-	1585	14	FSM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_9	7.3524942432914	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTCTTGGTTTTAGC	NA	False	NA	-4	True	AATAAA	-32	NA	84255150	84234366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288_84251400_84254850
ENSMUST00000032877.11	chr7	-	3387	6	FSM	ENSMUSG00000030641.11	ENSMUST00000032877.11	3387	6	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	35.6168499449348	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTTGTTATAATTT	NA	False	NA	-1	True	AGTAAA	-18	NA	92523455	92506732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92521969_92522053_92523348
ENSMUST00000032882.9	chr7	+	683	3	FSM	ENSMUSG00000030647.9	ENSMUST00000032882.9	683	3	0	0	0	0	multi-exon	FALSE	canonical	3	2164	junction_2	233	13516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCTTTCCTGGTTCTGC	NA	False	NA	21	True	ATTAAA	-20	NA	97049209	97057009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_97049565_97056072_97056217_97056825
ENSMUST00000032884.16	chr7	+	937	5	FSM	ENSMUSG00000030649.19	ENSMUST00000032884.16	937	5	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	120.728000066265	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAATGTCTATTCCCTG	7837	False	NA	19	True	AATAAA	-19	NA	101545634	101548745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106
ENSMUST00000032887.4	chr7	-	914	6	FSM	ENSMUSG00000030652.12	ENSMUST00000032887.4	914	6	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_3	42.5234053198941	2875	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	6625	False	NA	-2	True	AATAAA	-16	NA	118132579	118124284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118127642_118128781_118128961_118132401
ENSMUST00000032888.10	chr7	-	2171	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	0	0	0	0	multi-exon	FALSE	canonical	3	2173	junction_1	168.469106960297	7563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTTTGTTAACTCTGA	NA	False	NA	-11	True	ATTAAA	-25	NA	117728885	117718113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ENSMUST00000032895.15	chr7	+	1685	14	FSM	ENSMUSG00000030659.15	ENSMUST00000032895.15	1685	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	11.132340009308	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACACACGTTTTTATCTT	NA	False	NA	NA	False	AATAAA	-44	NA	116103603	116139819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_116103720_116108689_116108861_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179_116139262_116139676
ENSMUST00000032898.9	chr14	+	4518	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	0	0	0	0	multi-exon	TRUE	canonical	3	890	junction_17	126.92017018583	3415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGCATTACTTCATTA	1831	False	NA	16	True	ATTAAA	-17	NA	121148635	121185411	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ENSMUST00000032899.12	chr7	+	1479	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	0	0	0	0	multi-exon	FALSE	canonical	3	1664	junction_2	78.2527954772224	6146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	False	NA	29	True	AATAAA	-20	NA	115692535	115704445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
ENSMUST00000032906.11	chr7	-	994	5	FSM	ENSMUSG00000030669.14	ENSMUST00000032906.11	994	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	7.39932429347437	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGTCTTTGCTGTTACT	2034	False	NA	0	True	ATTAAA	-27	NA	114235592	114230712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_114231141_114231650_114231835_114233702_114233844_114234361_114234457_114235446
ENSMUST00000032907.9	chr7	-	830	4	FSM	ENSMUSG00000030669.14	ENSMUST00000032907.9	830	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	40.2022663816634	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGAACCATGGTGGTCA	2079	False	NA	NA	False	AATAAA	-16	NA	114235547	114232527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_114233021_114233702_114233844_114234361_114234457_114235446
ENSMUST00000032910.13	chr7	+	766	7	FSM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	683.213892000318	6100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTGTGTTCATGCGCA	2960	False	NA	42	True	AATAAA	-34	NA	126810779	126813470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_126810936_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ENSMUST00000032915.8	chr7	-	2115	14	FSM	ENSMUSG00000030677.9	ENSMUST00000032915.8	2115	14	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_8	49.8885147636753	2111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGAGCCTGGTTTTTGA	7925	False	NA	-6	True	AATACA	-13	NA	126641643	126626902	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ENSMUST00000032926.12	chr7	-	941	6	FSM	ENSMUSG00000060538.15	ENSMUST00000032926.12	941	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	14.8781719307178	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTGTAAGGTACTTAC	6219	False	NA	-2	True	AATAAA	-14	NA	126497448	126485391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126496400_126497395
ENSMUST00000032934.12	chr7	-	1511	9	FSM	ENSMUSG00000030695.17	ENSMUST00000032934.12	1511	9	0	0	0	0	multi-exon	FALSE	canonical	3	19253	junction_4	564.678448322583	41327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398426	126394405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ENSMUST00000032936.8	chr7	-	1359	9	FSM	ENSMUSG00000030697.8	ENSMUST00000032936.8	1359	9	0	0	0	0	multi-exon	FALSE	canonical	3	1828	junction_8	282.244574792856	4313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGTTCTGTCAGGTTTG	5070	False	NA	NA	False	AATAAA	-15	NA	126391668	126385037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
ENSMUST00000032944.9	chr7	+	1148	10	FSM	ENSMUSG00000030703.9	ENSMUST00000032944.9	1148	10	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_3	2.43938871112224	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTTCATGGAACAAGGG	NA	False	NA	12	True	AATAAA	-18	NA	126365505	126374817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_126365782_126366073_126366117_126366346_126366483_126366562_126366609_126366738_126366858_126366934_126367025_126367741_126367876_126370159_126370220_126370333_126370386_126374625
ENSMUST00000032949.14	chr7	-	1660	11	FSM	ENSMUSG00000030707.16	ENSMUST00000032949.14	1660	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	5.95315042645489	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAGACTCCGGTGAACT	NA	False	NA	NA	False	AATAAA	-21	NA	126303988	126298944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126299158_126299428_126299645_126299755_126299814_126299911_126300058_126300163_126300269_126300461_126300582_126300689_126300875_126300961_126301092_126301177_126301301_126302147_126302347_126303823
ENSMUST00000032956.10	chr7	+	1312	10	FSM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_3	31.8433666561813	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTTGTACTTTAGGT	111	False	NA	NA	False	AATACA	-18	NA	126248480	126272097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
ENSMUST00000032961.4	chr7	-	829	3	FSM	ENSMUSG00000030717.10	ENSMUST00000032961.4	829	3	0	0	0	0	multi-exon	FALSE	canonical	3	3716	junction_2	16	21176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGGCGTGTGTTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	126224848	126222420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126222752_126224061_126224206_126224494
ENSMUST00000032969.14	chr7	-	3069	12	FSM	ENSMUSG00000030726.17	ENSMUST00000032969.14	3069	12	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_4	47.2898570362863	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770772	99731317	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ENSMUST00000032988.10	chr7	-	1852	6	FSM	ENSMUSG00000030800.11	ENSMUST00000032988.10	1852	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	2.78567765543682	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTACACATATTTACAG	NA	False	NA	NA	False	AATAAA	-14	NA	127529276	127524887	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127525813_127525916_127526084_127526170_127526443_127526980_127527144_127528728_127528747_127528969
ENSMUST00000032992.7	chr7	-	3383	21	FSM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	0	0	0	0	multi-exon	FALSE	canonical	3	1924	junction_14	277.99846672239	5960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGAGTTTCTAAAGGT	NA	False	NA	NA	False	NA	NA	NA	126165583	126145626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ENSMUST00000032994.15	chr7	-	2219	12	FSM	ENSMUSG00000030741.16	ENSMUST00000032994.15	2219	12	0	0	0	0	multi-exon	TRUE	canonical	3	348	junction_9	48.6508899292612	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGCTTGTCTCTCTGT	NA	False	NA	1	True	AATAAA	-21	NA	125976622	125969231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ENSMUST00000032998.13	chr7	-	1908	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	0	0	0	0	multi-exon	FALSE	canonical	3	4974	junction_1	3419.39811549083	167089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGAGTATGCAATTATT	8335	False	NA	-12	True	AATAAA	-29	NA	99132945	99127102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ENSMUST00000033006.14	chr7	-	1120	8	FSM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_7	177.832872698624	4072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTGTGTGAGGTTGGGT	NA	False	NA	-11	True	AGTAAA	-33	NA	125090768	125066811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
ENSMUST00000033008.10	chr7	-	1201	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	0	0	0	0	multi-exon	FALSE	canonical	3	2548	junction_6	196.061655709387	12304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCAAGTTTTTGTTTT	NA	False	NA	0	True	AATAAA	-17	NA	113875353	113863840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ENSMUST00000033010.9	chr7	+	2389	8	FSM	ENSMUSG00000030752.9	ENSMUST00000033010.9	2389	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	4.74664220738176	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAGAAACATTTCTTTA	NA	False	NA	NA	False	AATAAA	-27	NA	125043847	125061441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_125043965_125051399_125051901_125054262_125054430_125055604_125055738_125056135_125056181_125059046_125059197_125060086_125060180_125060258
ENSMUST00000033012.9	chr7	-	3346	22	FSM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_12	34.3731688854697	921	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATCTGTGGGATTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	113853946	113814793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113853104_113853255_113853840
ENSMUST00000033023.10	chr7	+	1487	6	FSM	ENSMUSG00000030762.12	ENSMUST00000033023.10	1487	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	2.57681974534503	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCTGTTGACTTGTCTT	4376	False	NA	7	True	AATAAA	-21	NA	123061513	123067227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_123061682_123061796_123062042_123063411_123063539_123064331_123064547_123065808_123065944_123066630
ENSMUST00000033025.7	chr7	+	1369	11	FSM	ENSMUSG00000030763.8	ENSMUST00000033025.7	1369	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	88.7783757454483	2217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTGTACAATGACATTC	6824	False	NA	31	True	AATAAA	-31	NA	122977204	123029581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003708_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
ENSMUST00000033030.14	chr7	+	4454	13	FSM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	5.24603024517905	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCGCTGTTTCTTCCAA	3329	False	NA	NA	False	AATGAA	-13	NA	112026912	112190899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ENSMUST00000033036.7	chr7	-	3359	8	FSM	ENSMUSG00000030772.7	ENSMUST00000033036.7	3359	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	18.9198092927352	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATGGTATGGGTCCATT	NA	False	NA	-1	True	AATAAA	-23	NA	111758264	111715223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111748167_111748252_111749817_111749956_111757389_111757626_111758172
ENSMUST00000033040.12	chr7	+	3065	15	FSM	ENSMUSG00000030774.14	ENSMUST00000033040.12	3065	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	56.3067853960129	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAAGTGTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-20	NA	97492141	97561588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_97492349_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ENSMUST00000033049.9	chr7	-	680	3	FSM	ENSMUSG00000030785.9	ENSMUST00000033049.9	680	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	3.5	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTCTTGTGTTAGTTCT	5383	False	NA	NA	False	AATACA	-20	NA	127805559	127804606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127804985_127805071_127805209_127805394
ENSMUST00000033060.14	chr7	+	2140	12	FSM	ENSMUSG00000030796.18	ENSMUST00000033060.14	2140	12	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	60.1724793633042	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGGGGATTTATTTGA	5430	False	NA	NA	False	AATAAA	-38	NA	44865176	44883068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44865257_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ENSMUST00000033063.15	chr7	-	1268	9	FSM	ENSMUSG00000030798.16	ENSMUST00000033063.15	1268	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	25.228641957109	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTTTTTTTTTTTTTT	4144	False	NA	-22	True	AATAAA	-16	NA	44888539	44883064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44883403_44884107_44884192_44884830_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083_44888159_44888383
ENSMUST00000033070.9	chr7	+	1579	11	FSM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_2	15.0053323855222	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGATTCCTCGCTCCTTT	NA	False	NA	92	True	NA	NA	NA	127511687	127525009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
ENSMUST00000033074.8	chr7	-	748	3	FSM	ENSMUSG00000096145.3	ENSMUST00000033074.8	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	18.5	1976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTAGCATATGTCTGCC	NA	False	NA	-11	True	AATAAA	-19	NA	127494789	127492234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127492664_127493676_127493787_127494580
ENSMUST00000033075.14	chr7	+	1456	11	FSM	ENSMUSG00000030805.15	ENSMUST00000033075.14	1456	11	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	24.7872951327893	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTGCAGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	127440935	127448191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740_127447840_127447922
ENSMUST00000033086.8	chr7	+	1570	10	FSM	ENSMUSG00000030815.12	ENSMUST00000033086.8	1570	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	31.2018517968975	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTCTGCTGTCTAGT	NA	False	NA	26	True	AATAAA	-27	NA	127172575	127182479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127172629_127173025_127173139_127176706_127176883_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ENSMUST00000033088.8	chr7	+	3906	18	FSM	ENSMUSG00000030816.9	ENSMUST00000033088.8	3906	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	101.370743716621	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGCAGAGAAGCCCGTC	NA	False	NA	12	True	AATAAA	-13	NA	127188090	127202757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ENSMUST00000033093.10	chr7	-	867	6	FSM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_5	352.488638114762	7286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCCCTTGTCCGCCCA	9915	False	NA	-2	True	AATAAA	-22	NA	45116322	45111120	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
ENSMUST00000033096.16	chr7	-	2111	13	FSM	ENSMUSG00000030824.18	ENSMUST00000033096.16	2111	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	147.246014848922	517	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTGCCCTCTTCCAA	NA	False	NA	-4	True	AATAAA	-19	NA	45159750	45142531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45143374_45143540_45143626_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
ENSMUST00000033098.16	chr7	+	1772	11	FSM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	0	0	0	0	multi-exon	TRUE	canonical	3	349	junction_4	47.8895604490164	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCTATCATGCTCTAAG	2255	False	NA	NA	False	AATAAA	-18	NA	45219576	45239135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
ENSMUST00000033099.6	chr7	-	951	3	FSM	ENSMUSG00000030827.6	ENSMUST00000033099.6	951	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGAGATATGTTTC	NA	False	NA	NA	False	AATAAA	-29	NA	45264914	45263309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45263735_45264289_45264394_45264492
ENSMUST00000033121.7	chr7	+	4257	31	FSM	ENSMUSG00000030835.7	ENSMUST00000033121.7	4257	31	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_14	37.3234510730184	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAGTGTGGGGTGCATAC	8093	False	NA	29	True	AATAAA	-29	NA	45683121	45733636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ENSMUST00000033127.12	chr7	-	1465	11	FSM	ENSMUSG00000030839.13	ENSMUST00000033127.12	1465	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_10	7.18609768928867	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTGGCAGATTATGGG	NA	False	NA	-10	True	AATAAA	-35	NA	46289231	46092577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_46092960_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46289136
ENSMUST00000033131.12	chr7	+	1119	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	4056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCTGTCCTGCCCACT	7027	False	NA	28	True	GATAAA	-32	NA	101555110	101561110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
ENSMUST00000033133.12	chr7	-	880	5	FSM	ENSMUSG00000030844.12	ENSMUST00000033133.12	880	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	4.32290411644765	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTAGTCATTTCTACTT	NA	False	NA	NA	False	ATTAAA	-24	NA	128019897	127975344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127975767_127990687_127990832_128004893_128004981_128006082_128006202_128019789
ENSMUST00000033136.9	chr7	+	2562	4	FSM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	8.2192186706253	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTGTGGTTTCTAA	7142	False	NA	17	True	AATAAA	-22	NA	128125339	128148705	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_128125769_128141696_128142036_128143530_128143933_128147313
ENSMUST00000033139.15	chr7	-	4735	12	FSM	ENSMUSG00000030850.18	ENSMUST00000033139.15	4735	12	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	49.9651117950737	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	False	NA	-15	True	AATAAA	-16	NA	130121310	129993222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ENSMUST00000033154.8	chr7	+	2199	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	0	0	0	0	multi-exon	FALSE	canonical	3	1108	junction_2	92.3724345606776	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTCTCTTTTTG	NA	False	NA	56	True	ATTAAA	-14	NA	121758661	121769096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
ENSMUST00000033156.5	chr7	+	1532	6	FSM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_5	42.3008274150755	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTAGGCTCATTCATT	NA	False	NA	14	True	AATAAA	-15	NA	121732263	121748267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
ENSMUST00000033176.7	chr7	+	1896	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_9	72.1248916810278	6179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATCCTCTCAGCTGGT	NA	False	NA	22	True	AGTAAA	-14	NA	120234398	120258747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ENSMUST00000033182.10	chr7	+	1795	13	FSM	ENSMUSG00000030890.17	ENSMUST00000033182.10	1795	13	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	33.4937805171846	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTGTGGGGACAGAGGG	NA	False	NA	28	True	AATAAA	-18	NA	105385798	105392132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_105385924_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUST00000033184.6	chr7	-	3558	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTTGTATTGTAAATGT	NA	False	NA	NA	False	NA	NA	NA	105401442	105394017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ENSMUST00000033198.6	chr7	-	1383	8	FSM	ENSMUSG00000030905.6	ENSMUST00000033198.6	1383	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.55550625999976	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTTTGACAACTTTCTA	NA	False	NA	1	True	AATAAA	-21	NA	119801334	119785602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_119785922_119788948_119789034_119789674_119789797_119794547_119794732_119796872_119796975_119798470_119798534_119800299_119800451_119800977
ENSMUST00000033210.13	chr7	+	1484	5	FSM	ENSMUSG00000030917.14	ENSMUST00000033210.13	1484	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	8.8423695919137	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTTTTCTTTTTCTT	NA	False	NA	5	True	ATTAAA	-14	NA	119701575	119720209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_119701739_119703852_119704053_119714608_119714778_119715442_119715582_119719396
ENSMUST00000033224.14	chr7	-	3487	9	FSM	ENSMUSG00000030929.18	ENSMUST00000033224.14	3487	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	22.8965062837106	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGTGTGTTTGATGCC	NA	False	NA	0	True	AATAAA	-36	NA	119393205	119383049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391567_119391653_119391722_119393140
ENSMUST00000033236.9	chr7	-	2689	4	FSM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	48.9239773072014	956	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCATTCTTTTTTATT	NA	False	NA	-1	True	AATAAA	-20	NA	119320021	119314315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_119316293_119317244_119317494_119318349_119318525_119319733
ENSMUST00000033241.6	chr7	+	1612	7	FSM	ENSMUSG00000030946.14	ENSMUST00000033241.6	1612	7	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_6	19.9979165581484	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGACTCAGCCTTTCTTA	NA	False	NA	12	True	AATAAA	-20	NA	132212367	132308149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132307320
ENSMUST00000033257.15	chr7	-	1107	6	FSM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_3	60.7651215747982	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGGTTTTTGTGC	NA	False	NA	NA	False	AGTAAA	-18	NA	132454402	132429185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
ENSMUST00000033282.5	chr7	+	1244	7	FSM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	0	0	0	0	multi-exon	FALSE	canonical	3	1578	junction_1	47.9215214931895	6225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAAGTGTTCATGTCC	1307	False	NA	23	True	AATAAA	-24	NA	133311061	133322874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_133311258_133315916_133315992_133316627_133316709_133318589_133318680_133319327_133319516_133320832_133321008_133322435
ENSMUST00000033290.12	chr7	-	2955	12	FSM	ENSMUSG00000030986.14	ENSMUST00000033290.12	2955	12	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_11	48.5725154403017	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	-9	True	AATAAA	-19	NA	133378532	133322670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330
ENSMUST00000033313.3	chrX	+	2324	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_3	62.8369666279333	3658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTTACAGTTTTAT	NA	False	NA	84	True	AATAAA	-19	NA	12454039	12483288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUST00000033325.9	chr7	+	4027	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAACTGGTTACATTAA	NA	False	NA	77	True	ATTAAA	-20	NA	109820917	109882713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ENSMUST00000033333.13	chr7	-	1703	5	FSM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_4	15.7698287879102	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTTTCTGTTCTCCAG	NA	False	NA	2	True	AATAAA	-19	NA	109351486	109335040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_109336199_109342753_109342889_109344516_109344626_109349219_109349312_109351277
ENSMUST00000033335.6	chr7	+	1028	6	FSM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	91.1249691357972	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTTATTGCTATTAAA	NA	False	NA	NA	False	AATAAA	-25	NA	109302896	109311396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ENSMUST00000033388.12	chr7	+	2015	5	FSM	ENSMUSG00000031072.15	ENSMUST00000033388.12	2015	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	3.69966214673719	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCTGTCTGGGATCATT	NA	False	NA	8	True	AATAAA	-18	NA	144468871	144474871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_144469067_144470164_144470271_144471346_144471418_144472960_144473079_144473346
ENSMUST00000033389.7	chr7	+	1810	3	FSM	ENSMUSG00000031073.7	ENSMUST00000033389.7	1810	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTGTTCTATTCCAAG	NA	False	NA	NA	False	ATTAAA	-23	NA	144450267	144454690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_144450669_144450852_144450957_144453385
ENSMUST00000033407.13	chr7	-	2913	17	FSM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	0	0	0	0	multi-exon	TRUE	canonical	3	340	junction_7	190.956545694956	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGATCTTCTGCAG	NA	False	NA	-18	True	AATAAA	-16	NA	144024482	143989469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ENSMUST00000033415.15	chr7	-	2641	21	FSM	ENSMUSG00000031090.15	ENSMUST00000033415.15	2641	21	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	7.20416546173115	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTATTGATGTGTACG	NA	False	NA	NA	False	AATAAA	-25	NA	143376578	143349320	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
ENSMUST00000033430.3	chrX	+	1158	2	FSM	ENSMUSG00000031104.3	ENSMUST00000033430.3	1158	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACGTGGCTTTGTGTCTT	NA	False	NA	6	True	AATAAA	-14	NA	47608161	47619109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_47608736_47618525
ENSMUST00000033431.14	chrX	+	1760	11	FSM	ENSMUSG00000031105.17	ENSMUST00000033431.14	1760	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	43.9708994677161	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGACTTTGTCTTCA	NA	False	NA	14	True	ATTAAA	-17	NA	47712454	47751171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_47712706_47712838_47713075_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ENSMUST00000033433.3	chrX	+	1747	6	FSM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_1	50.9768574943572	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCATTTGGTCCACTCA	NA	False	NA	NA	False	NA	NA	NA	47783880	47799600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_47783998_47784196_47784313_47786277_47786330_47795181_47795312_47797766_47797951_47798452
ENSMUST00000033437.15	chrX	-	3170	16	FSM	ENSMUSG00000031109.17	ENSMUST00000033437.15	3170	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	15.0814087169896	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACAGGGACTCCTCTGG	NA	False	NA	45	True	NA	NA	NA	48377119	48099334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48377033
ENSMUST00000033449.8	chrX	-	1454	4	FSM	ENSMUSG00000031118.9	ENSMUST00000033449.8	1454	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	37.249906785864	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGTTGCTCCGTTTCA	NA	False	NA	-2	True	CATAAA	-17	NA	51061649	51057571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_51058747_51059091_51059163_51059786_51059953_51061607
ENSMUST00000033450.3	chrX	-	2651	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTGGAAAATTTCCATT	NA	False	NA	-19	True	ATTAAA	-15	NA	51254129	51141897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
ENSMUST00000033458.3	chrX	+	1022	8	FSM	ENSMUSG00000031125.3	ENSMUST00000033458.3	1022	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	16.2819544532076	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGCAAATAGTCCTT	NA	False	NA	NA	False	AATAAA	-15	NA	55181931	55198858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_55181986_55183330_55183457_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198114_55198432
ENSMUST00000033478.5	chrX	-	3659	26	FSM	ENSMUSG00000031139.17	ENSMUST00000033478.5	3659	26	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_25	175.787125808462	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACTCTGGTGTTCGTGT	NA	False	NA	-5	True	AATAAA	-26	NA	59193003	59101318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59192833
ENSMUST00000033483.5	chrX	-	2353	17	FSM	ENSMUSG00000031143.5	ENSMUST00000033483.5	2353	17	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_12	25.3807721267498	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGCTTAGGCATGGATT	NA	False	NA	-9	True	AATAAA	-19	NA	7471756	7460047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
ENSMUST00000033485.14	chrX	+	2301	9	FSM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	5.54526825320471	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTGTTTATTTAGCC	NA	False	NA	97	True	AAAAAG	-31	NA	7523498	7534197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
ENSMUST00000033486.6	chrX	-	1157	5	FSM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	0	0	0	0	multi-exon	FALSE	canonical	3	2052	junction_4	105.587641322268	17946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAAGTTAACTTTTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	7537629	7534179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841_7535998_7537381
ENSMUST00000033489.8	chrX	+	1339	3	FSM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_2	75.5	2665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCTCCTGTGTGAAG	1170	False	NA	7	True	AATAAA	-20	NA	7594677	7597303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7595002_7595954_7596173_7596506
ENSMUST00000033495.15	chrX	+	2045	6	FSM	ENSMUSG00000031155.18	ENSMUST00000033495.15	2045	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	7.30479294709987	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATTGCCATTTATAGAA	NA	False	NA	5	True	AATAAA	-15	NA	7744540	7749671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7744796_7744922_7745033_7745866_7745918_7747486_7747860_7748311_7748489_7748592
ENSMUST00000033497.9	chrX	-	1104	7	FSM	ENSMUSG00000031157.11	ENSMUST00000033497.9	1104	7	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_6	154.654902569847	1729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGGCTTGAGTGCTTC	296	False	NA	-1	True	AATAAA	-22	NA	7765508	7760757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765407
ENSMUST00000033500.5	chrX	-	1077	2	FSM	ENSMUSG00000031160.5	ENSMUST00000033500.5	1077	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTTTGTTTTTCTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	7794846	7790514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_7791453_7794707
ENSMUST00000033501.15	chrX	-	4142	29	FSM	ENSMUSG00000031161.16	ENSMUST00000033501.15	4142	29	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_28	71.4613049995933	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGTGCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	7814128	7796360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813813
ENSMUST00000033503.3	chrX	-	673	4	FSM	ENSMUSG00000031163.3	ENSMUST00000033503.3	673	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	18.5472369909914	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCACTCTTGGCAGAG	NA	False	NA	-9	True	AATAAA	-21	NA	7884731	7870438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_7870742_7871941_7872098_7881456_7881595_7884655
ENSMUST00000033519.3	chrX	-	2176	5	FSM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_4	27.1523479647709	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGCTCTGGTTGATCC	NA	False	NA	-1	True	AATAAA	-21	NA	9529242	9520505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_9522303_9522618_9522697_9523279_9523404_9527218_9527261_9529107
ENSMUST00000033522.15	chrX	+	1649	4	FSM	ENSMUSG00000031179.15	ENSMUST00000033522.15	1649	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.69967317119759	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTTTAGTCTCCCGTT	NA	False	NA	NA	False	AATAAA	-20	NA	63217153	63222384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_63217298_63219533_63219620_63220397_63220469_63221036
ENSMUST00000033540.6	chrX	+	1595	6	FSM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	0	0	0	0	multi-exon	FALSE	canonical	3	1794	junction_5	66.7580706731403	13569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGACAATTTTTTCATT	NA	False	NA	14	True	ATTAAA	-20	NA	74557904	74578548	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
ENSMUST00000033541.5	chrX	+	2562	5	FSM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	30.589009464185	1545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTCAGACTCCACTTGT	537	False	NA	NA	False	AATAAA	-21	NA	74426004	74440065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_74426058_74430707_74430859_74434389_74434466_74435245_74435378_74437915
ENSMUST00000033543.14	chrX	-	992	3	FSM	ENSMUSG00000090110.9	ENSMUST00000033543.14	992	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	10	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	74460171	74448451	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_74448825_74453151_74453220_74459620
ENSMUST00000033544.14	chrX	+	4310	11	FSM	ENSMUSG00000031201.18	ENSMUST00000033544.14	4310	11	0	0	0	0	multi-exon	FALSE	canonical	1	239	junction_10	337.579694294547	2013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCTTTATGACTTTGG	NA	False	NA	NA	False	NA	NA	NA	74460233	74497607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_74460448_74461182_74461200_74462016_74462072_74466384_74466505_74479070_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ENSMUST00000033570.6	chrX	+	1518	6	FSM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_5	20.4743742273116	4559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGGACTTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	99537896	99559731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_99538163_99538510_99538805_99546600_99546797_99548795_99548876_99549545_99549659_99559162
ENSMUST00000033577.11	chrX	+	2638	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	0	0	0	0	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	4404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATAGCTCTTTCCAG	NA	False	NA	NA	False	NA	NA	NA	104123361	104128792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ENSMUST00000033582.5	chrX	+	1001	3	FSM	ENSMUSG00000031231.5	ENSMUST00000033582.5	1001	3	0	0	0	0	multi-exon	FALSE	canonical	3	7724	junction_1	851.5	58095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGGGTTTAAAGTGATAA	NA	False	NA	NA	False	AATAAA	-14	NA	105059305	105066056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_105059477_105063184_105063310_105065351
ENSMUST00000033583.14	chrX	-	4115	11	FSM	ENSMUSG00000031232.18	ENSMUST00000033583.14	4115	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	64.6371410258839	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGGTTTTTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	105055505	105011689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_105014633_105015041_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ENSMUST00000033591.6	chrX	-	1744	6	FSM	ENSMUSG00000031239.6	ENSMUST00000033591.6	1744	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	8.06473806146238	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCATTCCCATCTCTAC	NA	False	NA	NA	False	TATAAA	-18	NA	106446982	106440704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_106441586_106441701_106441853_106442376_106442488_106442701_106442900_106443172_106443305_106446711
ENSMUST00000033597.9	chrX	-	1934	6	FSM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	41.3424721079908	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTTTGCAATATTTCA	NA	False	NA	1	True	AATAAA	-19	NA	108057010	108048139	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_108049678_108051767_108051903_108054159_108054214_108054462_108054493_108055027_108055052_108056857
ENSMUST00000033598.9	chrX	+	2882	4	FSM	ENSMUSG00000031246.15	ENSMUST00000033598.9	2882	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	2.86744175568088	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGATTACTTTTAATTT	NA	False	NA	NA	False	AATAAA	-18	NA	108138970	108206077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_108139244_108193520_108193707_108197911_108197993_108203735
ENSMUST00000033609.9	chrX	+	4502	14	FSM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_8	78.010695670871	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCTACTTAGAAATCTT	NA	False	NA	12	True	AATAAA	-12	NA	132959945	132987568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ENSMUST00000033662.9	chrX	-	2848	11	FSM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	0	0	0	0	multi-exon	FALSE	canonical	3	1235	junction_1	109.21011857882	4789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTCTTGAGTTCCCTTTC	NA	False	NA	-1	True	ATTAAA	-24	NA	158921409	158905204	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ENSMUST00000033664.14	chrX	-	1670	8	FSM	ENSMUSG00000031304.19	ENSMUST00000033664.14	1670	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	5.61702950038214	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTTACAGGGGTTGGG	NA	False	NA	NA	False	AATAAA	-26	NA	100311861	100307983	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_100308644_100308981_100309049_100309235_100309333_100309786_100309950_100310583_100310727_100310916_100311102_100311316_100311471_100311660
ENSMUST00000033673.7	chrX	+	2562	12	FSM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	0	0	0	0	multi-exon	FALSE	canonical	3	3075	junction_4	297.011255595496	12477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473160	100492197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ENSMUST00000033683.8	chrX	-	975	7	FSM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	0	0	0	0	multi-exon	FALSE	canonical	3	11043	junction_6	2028.67992108716	161076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	101233000	101228546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
ENSMUST00000033695.6	chrX	-	5667	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	1807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCTGGTGGAAATCA	9861	False	NA	-2	True	AATAAA	-24	NA	103457452	103324262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ENSMUST00000033700.12	chrX	+	3316	15	FSM	ENSMUSG00000031337.17	ENSMUST00000033700.12	3316	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	89.0701683952556	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAATATATTAACTAAA	NA	False	NA	-14	True	AATAAA	-18	NA	70258644	70358871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339954_70343171_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ENSMUST00000033713.11	chrX	-	1026	4	FSM	ENSMUSG00000031347.13	ENSMUST00000033713.11	1026	4	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_2	29.9146935282461	1622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCATTCTTTAAAGGAT	NA	False	NA	-13	True	AATAAA	-17	NA	71960462	71957309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293
ENSMUST00000033717.9	chrX	-	2320	7	FSM	ENSMUSG00000031352.11	ENSMUST00000033717.9	2320	7	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_6	111.381351920129	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTAGAGTGATTTTTGT	NA	False	NA	0	True	AATAAA	-25	NA	168103276	168094525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168103110
ENSMUST00000033720.12	chrX	+	2244	12	FSM	ENSMUSG00000031353.14	ENSMUST00000033720.12	2244	12	0	0	0	0	multi-exon	FALSE	canonical	3	2711	junction_3	173.446540695797	5330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATATCTGCATCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	161543397	161562088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ENSMUST00000033725.16	chrX	-	2399	13	FSM	ENSMUSG00000031358.18	ENSMUST00000033725.16	2399	13	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_12	12.277746354912	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAAGAGGAGTTTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	167456894	167437112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167455258_167455342_167456723
ENSMUST00000033737.15	chrX	-	1380	10	FSM	ENSMUSG00000031371.15	ENSMUST00000033737.15	1380	10	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_3	42.8281089190294	1780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCCTTCGGACTACT	NA	False	NA	-12	True	AATAAA	-17	NA	72502650	72480920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72481172_72489415_72489531_72490533_72490744_72491565_72491663_72491797_72491957_72492416_72492509_72496604_72496667_72498472_72498541_72501579_72501696_72502440
ENSMUST00000033749.9	chrX	+	1599	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTGCTTTTTTATATG	NA	False	NA	NA	False	TATAAA	-15	NA	163052426	163156007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ENSMUST00000033754.15	chrX	+	3594	6	FSM	ENSMUSG00000031381.17	ENSMUST00000033754.15	3594	6	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_2	38.4052079801685	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163202782	163216912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ENSMUST00000033763.15	chrX	-	962	8	FSM	ENSMUSG00000031388.15	ENSMUST00000033763.15	962	8	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	315.02562254068	4159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGGGTATGCTTTTTTT	NA	False	NA	-1	True	AATAAA	-38	NA	72965550	72960478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72960802_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ENSMUST00000033770.13	chrX	-	1739	3	FSM	ENSMUSG00000031393.17	ENSMUST00000033770.13	1739	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	51.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTAGAGTTTCGTGGC	NA	False	NA	NA	False	AATAAA	-22	NA	73129296	73078893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_73080101_73080587_73080939_73129115
ENSMUST00000033776.15	chrX	+	2804	15	FSM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	0	0	0	0	multi-exon	FALSE	canonical	3	1536	junction_9	499.509294922813	3005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139459	74153383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUST00000033797.13	chrX	-	1996	4	FSM	ENSMUSG00000031422.17	ENSMUST00000033797.13	1996	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1439.93989072075	5446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642410	135633690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135642141
ENSMUST00000033805.15	chrX	-	1430	5	FSM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_1	39.0024037720754	1805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCCCAATTTCTCATTC	NA	False	NA	-8	True	AATAAA	-11	NA	139857438	139849177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548_139854648_139857302
ENSMUST00000033809.4	chrX	+	1965	7	FSM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	0	0	0	0	multi-exon	FALSE	canonical	3	1771	junction_6	191.019850626403	5654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	False	NA	27	True	AATAAA	-19	NA	139357361	139376889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
ENSMUST00000033839.9	chr8	-	793	4	FSM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	307.613393726606	1465	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTATGCTCTGTCTGCG	NA	False	NA	-8	True	AATAAA	-16	NA	13940268	13934793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_13935202_13935665_13935882_13937759_13937827_13940166
ENSMUST00000033865.16	chr8	-	2021	16	FSM	ENSMUSG00000031478.17	ENSMUST00000033865.16	2021	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_15	6.34350061086148	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTGTGCTGGTTTTCAA	NA	False	NA	2	True	AATACA	-17	NA	22656428	22618298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622210_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339_22652511_22656393
ENSMUST00000033866.9	chr8	+	3574	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	0	0	0	0	multi-exon	TRUE	canonical	3	316	junction_5	36.370219952707	991	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGAATTTTTCTGTTTT	NA	False	NA	9	True	GATAAA	-22	NA	22682824	22710859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ENSMUST00000033877.6	chr8	-	1899	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	8.9938250421547	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACCAGAGCTTTTAAA	NA	False	NA	-26	True	ATTAAA	-35	NA	27618708	27613391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
ENSMUST00000033880.7	chr8	+	1997	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	0	0	0	0	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	25842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATTGGTTCCCAGTGG	NA	False	NA	15	True	NA	NA	NA	27750356	27766702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_27750579_27763350_27763531_27765107
ENSMUST00000033901.11	chr8	+	1359	10	FSM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	63.9388210675343	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	33	True	NA	NA	NA	11547567	11563287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
ENSMUST00000033905.13	chr8	-	2285	6	FSM	ENSMUSG00000031508.15	ENSMUST00000033905.13	2285	6	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_3	111.790876193006	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	NA	False	NA	-3	True	AATAAA	-14	NA	11685754	11661583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
ENSMUST00000033910.9	chr8	-	2879	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	1523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGCTTGTGGGTGTTTT	8786	False	NA	-4	True	AATAAA	-16	NA	34614187	34602725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
ENSMUST00000033920.6	chr8	+	1181	9	FSM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_3	34.8440723079264	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGACATTATGGAATGT	NA	False	NA	-61	True	NA	NA	NA	53964761	53976373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
ENSMUST00000033923.14	chr8	-	6159	14	FSM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_4	11.0077971289962	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACACTGATTGAATTT	NA	False	NA	-13	True	NA	NA	NA	37081097	37034904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_37037558_37038418_37038593_37039821_37040040_37041108_37041328_37041960_37042076_37044188_37044403_37046377_37046577_37046700_37046861_37049854_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
ENSMUST00000033933.8	chr8	+	1860	6	FSM	ENSMUSG00000031532.8	ENSMUST00000033933.8	1860	6	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	37.2633868562695	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCTTGTTCTTTGTACT	NA	False	NA	9	True	AATAAA	-16	NA	34621729	34637975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872_34635012_34635610_34635766_34637249
ENSMUST00000033934.5	chr8	+	1515	7	FSM	ENSMUSG00000031533.5	ENSMUST00000033934.5	1515	7	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_2	48.7100263463968	2633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTTGTGTAATTTGC	NA	False	NA	NA	False	NA	NA	NA	22901376	22919681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
ENSMUST00000033938.7	chr8	+	1201	14	Antisense	novelGene_ENSMUSG00000031536.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCCTGACAGGGCGCAGC	NA	False	NA	NA	False	NA	NA	NA	23118141	23143434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr8_+_23118386_23120358_23120499_23121470_23121536_23127083_23127171_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
ENSMUST00000033950.7	chr8	-	1349	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	2152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCAAATGTCTTTTTTT	NA	False	NA	-22	True	AAAACA	-3	NA	23727675	23716631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
ENSMUST00000033961.7	chr8	+	1281	4	FSM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	26.3185612575358	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGAGTATTTC	NA	False	NA	14	True	AATAAA	-14	NA	25507226	25513276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_25507609_25508081_25508170_25510454_25510571_25512581
ENSMUST00000033966.13	chr8	+	2072	6	FSM	ENSMUSG00000031562.17	ENSMUST00000033966.14	2072	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	152.941034389074	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTGTTTGCTTTTATA	NA	False	NA	8	True	ATTAAA	-14	NA	48563047	48594698	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_48563317_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ENSMUST00000033973.14	chr8	+	2921	8	FSM	ENSMUSG00000031568.17	ENSMUST00000033973.14	2921	8	0	0	0	0	multi-exon	FALSE	canonical	2	108	junction_6	33.1305395830075	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTATATGTTTTGT	NA	False	NA	7	True	AATAAA	-17	NA	47986698	48005860	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48001006_48001010_48003729
ENSMUST00000033983.6	chr8	-	1902	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	0	0	0	0	multi-exon	FALSE	canonical	3	742	junction_2	38.8285245790727	2919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGTCTTGAGAATTCTG	NA	False	NA	-2	True	TATAAA	-20	NA	31658792	31649490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ENSMUST00000033999.8	chr8	-	1039	9	FSM	ENSMUSG00000031590.9	ENSMUST00000033999.8	1039	9	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_1	88.4737778949221	3211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTTCTCGAGTCCTTT	NA	False	NA	-7	True	AATAAA	-23	NA	41870111	41850495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
ENSMUST00000034000.15	chr8	-	2773	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	0	0	0	0	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	3276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTTTTTAAATAACTT	7501	False	NA	NA	False	NA	NA	NA	41827810	41793233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ENSMUST00000034012.10	chr8	-	2615	7	FSM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_2	67.4388612003495	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGTGACTGATGGCTT	NA	False	NA	-1	True	AATAAA	-23	NA	40964795	40945580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
ENSMUST00000034015.11	chr8	-	2044	6	FSM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	0	0	0	0	multi-exon	FALSE	canonical	3	690	junction_2	21.3822356174466	2406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCTGTTTTTTCC	NA	False	NA	-17	True	AATAAA	-1	NA	65186826	65171172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65186541
ENSMUST00000034030.15	chr8	-	2678	10	FSM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	10.9927024053615	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTTACGTGTCTTCT	NA	False	NA	-4	True	TTTAAA	-6	NA	78337282	78322610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731
ENSMUST00000034046.13	chr8	+	3897	21	FSM	ENSMUSG00000018796.14	ENSMUST00000034046.13	3897	21	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_9	34.1571368823559	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTTTCAAGTGCCTT	2206	False	NA	17	True	AATAAA	-26	NA	46924073	46989088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ENSMUST00000034048.13	chr8	+	4619	5	FSM	ENSMUSG00000031631.16	ENSMUST00000034048.13	4619	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	7.58287544405155	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGATTCTGTTTTGTTC	NA	False	NA	18	True	AATAAA	-19	NA	46616687	46648627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_46616787_46622595_46623690_46634754_46635024_46644616_46644768_46645621
ENSMUST00000034051.7	chr8	+	1640	12	FSM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_6	20.6765727613893	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTAGTCATGTAAATAC	8860	False	NA	104	True	AGTAAA	-19	NA	46428564	46449995	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ENSMUST00000034079.14	chr8	+	3251	15	FSM	ENSMUSG00000031657.17	ENSMUST00000034079.14	3251	15	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_7	19.6926641267291	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGTCATACAGATT	NA	False	NA	NA	False	AATAAA	-16	NA	88864482	88898655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ENSMUST00000034094.11	chr8	+	2519	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	2	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGTTGTCACTAACTG	NA	False	NA	NA	False	AATAAA	-14	NA	96360080	96371688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_96360412_96364437_96364672_96369734
ENSMUST00000034097.8	chr8	-	2530	10	FSM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	94.2456731822753	3634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTGCTTTTCTACT	NA	False	NA	-4	True	AATAAA	-17	NA	96615175	96590761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUST00000034111.10	chr8	+	3595	12	FSM	ENSMUSG00000031684.12	ENSMUST00000034111.10	3595	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	15.4524062690615	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGGAAATGTCGTGG	NA	False	NA	32	True	ATTAAA	-17	NA	79235996	79460632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ENSMUST00000034132.13	chr8	+	1287	7	FSM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	0	0	0	0	multi-exon	FALSE	canonical	3	862	junction_2	81.7626986399598	5614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGTGTATGAGTAT	NA	False	NA	9	True	AATAAA	-17	NA	86026419	86034700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_86026622_86027737_86027868_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ENSMUST00000034136.12	chr8	+	3639	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	271.645643020279	527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCAGCTTGGTCAATAA	NA	False	NA	13	True	AATAAA	-19	NA	86219204	86254189	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ENSMUST00000034138.7	chr8	-	2919	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_1	52.4486355875918	3130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCAGCATTCTTCAGT	NA	False	NA	NA	False	AATAAA	-15	NA	86281973	86264261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
ENSMUST00000034140.9	chr8	-	3306	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	0	0	0	0	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAACGCTGTGGCAAG	NA	False	NA	-21	True	AATAAA	-13	NA	86567550	86444206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ENSMUST00000034141.18	chr8	+	2859	15	FSM	ENSMUSG00000047866.21	ENSMUST00000034141.18	2859	15	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_5	34.038693468775	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATTCTGGTCTCCAGTG	NA	False	NA	NA	False	AATAAA	-12	NA	87350671	87443259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ENSMUST00000034147.4	chr8	-	1675	10	FSM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_3	43.069567612422	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGGTACTGAGTT	NA	False	NA	-17	True	AATAAA	-17	NA	83500789	83490249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
ENSMUST00000034159.8	chr8	+	1890	4	FSM	ENSMUSG00000031723.9	ENSMUST00000034159.8	1890	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	19.3045763140937	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGTTGTCTGTCCATC	NA	False	NA	15	True	AATAAA	-24	NA	110292523	110300683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_110292696_110295521_110295730_110298002_110298155_110299325
ENSMUST00000034164.6	chr8	-	2304	10	FSM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_2	71.0226880807973	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTTGGTCAAATGAG	NA	False	NA	-13	True	AATAAA	-20	NA	110419892	110397956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ENSMUST00000034171.9	chr8	+	3692	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTCCCACATTGTACTTT	NA	False	NA	NA	False	AATAAA	-20	NA	110505537	110587990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ENSMUST00000034187.9	chr8	+	3078	13	FSM	ENSMUSG00000031740.9	ENSMUST00000034187.9	3078	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	5.63964143856288	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGCTCTGTTTTAGC	NA	False	NA	4	True	AATAAA	-19	NA	93553918	93580048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_93554406_93557248_93557476_93558312_93558462_93559391_93559521_93559696_93559871_93562596_93562771_93563533_93563708_93565880_93566037_93567017_93567160_93570447_93570585_93572708_93572869_93576753_93576864_93579189
ENSMUST00000034203.17	chr8	+	2737	19	FSM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	0	0	0	0	multi-exon	TRUE	canonical	3	332	junction_8	32.668367302671	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTGTGTTGGGTCCAG	9628	False	NA	13	True	AATAAA	-18	NA	111573665	111608859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ENSMUST00000034204.11	chr8	-	5010	7	FSM	ENSMUSG00000031754.11	ENSMUST00000034204.11	5010	7	0	0	0	0	multi-exon	FALSE	canonical	3	2190	junction_4	118.898649651242	10025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAATTGTTTGGGATAT	NA	False	NA	NA	False	AATAAA	-17	NA	94763659	94742123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ENSMUST00000034205.5	chr8	+	1768	12	FSM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	41.3065540194129	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCAGTTCCTTTGGATG	NA	False	NA	8	True	AATAAA	-16	NA	117648478	117668242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ENSMUST00000034207.8	chr8	+	398	3	FSM	ENSMUSG00000031757.8	ENSMUST00000034207.8	398	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGTGGCTCAGAGTAT	6281	False	NA	NA	False	AATAAA	-16	NA	94863824	94865659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_94863901_94864858_94864925_94865403
ENSMUST00000034214.8	chr8	+	511	3	FSM	ENSMUSG00000031762.8	ENSMUST00000034214.8	511	3	0	0	0	0	multi-exon	FALSE	canonical	3	13494	junction_2	132	109171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCTGTGCATTGGT	NA	False	NA	37	True	AATAAA	-23	NA	94899291	94900196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_94899504_94899754_94899821_94899963
ENSMUST00000034215.8	chr8	-	549	3	Antisense	novelGene_ENSMUSG00000031765.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	85816	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCGCCAGTGTGCACAGC	NA	False	NA	NA	False	NA	NA	NA	94906955	94905709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr8_-_94905967_94906450_94906517_94906729
ENSMUST00000034220.8	chr8	+	1873	8	FSM	ENSMUSG00000031770.17	ENSMUST00000034220.8	1873	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	160.784175279808	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAGACTCCCATTGTCC	NA	False	NA	28	True	AATAAA	-21	NA	95113122	95121986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_95113367_95115983_95116062_95116151_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
ENSMUST00000034234.15	chr8	+	1789	9	FSM	ENSMUSG00000031782.16	ENSMUST00000034234.15	1789	9	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	12.7322179921646	751	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTGTTTTGTCTAT	NA	False	NA	9	True	AATAAA	-15	NA	95564948	95581523	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95577228_95578478_95578584_95579742_95579899_95580232_95580287_95580741
ENSMUST00000034244.9	chr8	+	2124	6	FSM	ENSMUSG00000031791.9	ENSMUST00000034244.9	2124	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	8.51821577561874	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTTTTTCTTTATTCA	NA	False	NA	NA	False	AATAAA	-18	NA	73325916	73341126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_73326072_73333406_73333564_73333803_73333989_73335028_73335117_73338543_73338662_73339705
ENSMUST00000034249.8	chr8	-	1295	6	FSM	ENSMUSG00000031796.8	ENSMUST00000034249.8	1295	6	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_1	23.7200337267888	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	False	NA	-6	True	AATAAA	-24	NA	96161497	96146876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96151244_96151325_96161115
ENSMUST00000034265.11	chr8	-	1084	7	FSM	ENSMUSG00000031809.11	ENSMUST00000034265.11	1084	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.45034330760623	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGCCACTGACAAAAACG	NA	False	NA	NA	False	AATAAA	-22	NA	122268693	122257518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_122257781_122258436_122258654_122260433_122260471_122262161_122262309_122266605_122266747_122267275_122267320_122268457
ENSMUST00000034272.9	chr8	+	1062	9	FSM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_1	32.3177582762171	1648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGAGTGTATTGTTTT	NA	False	NA	11	True	AGTAAA	-18	NA	71995573	72000670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
ENSMUST00000034276.13	chr8	+	745	5	FSM	ENSMUSG00000031818.13	ENSMUST00000034276.13	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	8115	junction_1	456.952609687263	44522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121394960	121400946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_121395095_121396047_121396122_121399463_121399632_121399959_121400092_121400709
ENSMUST00000034285.14	chr8	-	1596	4	FSM	ENSMUSG00000031827.14	ENSMUST00000034285.14	1596	4	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	12.9185482500507	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGAGTTGGGTTGTCT	NA	False	NA	NA	False	AGTAAA	-14	NA	120567283	120535960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_120537095_120549392_120549551_120566880_120566964_120567062
ENSMUST00000034300.8	chr8	+	1208	4	FSM	ENSMUSG00000031839.8	ENSMUST00000034300.8	1208	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	885.438121308692	7408	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAAGAATGGTGTGGTC	NA	False	NA	NA	False	AATAAA	-18	NA	120071226	120075661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_120071360_120071674_120071742_120072351_120072473_120074774
ENSMUST00000034301.12	chr8	+	1363	5	FSM	ENSMUSG00000031840.15	ENSMUST00000034301.12	1363	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	7.43303437365925	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACGCAGTCCTTGACAT	NA	False	NA	46	True	NA	NA	NA	71207359	71211281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71207513_71208502_71208731_71209093_71209213_71209783_71209909_71210543
ENSMUST00000034303.3	chr8	-	1068	5	FSM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_1	47.4572175754121	2665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTTGAAGTAATTTTAG	NA	False	NA	-12	True	AATAAA	-22	NA	118528682	118518383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782_118525896_118528590
ENSMUST00000034311.15	chr8	+	925	5	FSM	ENSMUSG00000031848.16	ENSMUST00000034311.15	925	5	0	0	0	0	multi-exon	FALSE	canonical	3	2963	junction_1	310.191070148707	3337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTTCTTCTGCCTA	NA	False	NA	20	True	AATAAA	-20	NA	71125897	71131402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71126108_71129204_71129247_71130427_71130527_71130603_71130785_71131009
ENSMUST00000034313.13	chr8	+	1155	5	FSM	ENSMUSG00000031851.15	ENSMUST00000034313.13	1155	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	22.4388056723169	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGAGTCCTTGTGTGGG	NA	False	NA	23	True	AATAAA	-31	NA	126460941	126474974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126471974_126472185_126474436
ENSMUST00000034342.13	chr8	+	667	4	FSM	ENSMUSG00000054400.17	ENSMUST00000034342.13	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	21.1397466609439	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGCAGATCTCCTT	4792	False	NA	10	True	ATTAAA	-22	NA	104977492	104990079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_104977728_104983916_104984076_104988105_104988202_104989902
ENSMUST00000034343.5	chr8	+	1616	5	FSM	ENSMUSG00000031875.8	ENSMUST00000034343.5	1616	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	6.68954408012983	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGAGTGCGCCTGACT	NA	False	NA	13	True	ATTAAA	-15	NA	105067225	105074304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
ENSMUST00000034349.10	chr8	-	1808	20	FSM	ENSMUSG00000031878.19	ENSMUST00000034349.10	1808	20	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_15	52.7352662859429	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTGTTGTCTGGAA	3333	False	NA	NA	False	AATAAA	-19	NA	105261269	105237659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ENSMUST00000034359.10	chr8	-	1689	5	FSM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	9.66953980290686	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGTGCACGCCTTTAAT	505	False	NA	NA	False	AAAACA	-43	NA	105991241	105984917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153_105987313_105991192
ENSMUST00000034361.10	chr8	+	2916	16	FSM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	0	0	0	0	multi-exon	TRUE	canonical	3	239	junction_9	14.7126551724093	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951776	105979685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ENSMUST00000034370.17	chr8	-	3811	24	FSM	ENSMUSG00000017765.18	ENSMUST00000034370.17	3811	24	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_23	38.1304595706627	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTGCTCCGGCTC	NA	False	NA	-4	True	AATAAA	-18	NA	106692729	106670224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692550
ENSMUST00000034371.9	chr8	-	1698	10	FSM	ENSMUSG00000031898.10	ENSMUST00000034371.9	1698	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	8.79955105476592	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGAGCCCTCGTCCTC	NA	False	NA	1	True	AATAAA	-21	NA	106706061	106700144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106700484_106701326_106701463_106701813_106701890_106702751_106702837_106703892_106704070_106704191_106704262_106704531_106704674_106704773_106704904_106705343_106705471_106705645
ENSMUST00000034377.8	chr8	+	2706	6	FSM	ENSMUSG00000031903.8	ENSMUST00000034377.8	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	8.49941174435031	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTCCTGCTCTGA	6197	False	NA	14	True	AATAAA	-20	NA	106877030	106891347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106877246_106881499_106881657_106886794_106886914_106887212_106887312_106887715_106887941_106889456
ENSMUST00000034388.10	chr8	+	2178	11	FSM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_10	19.6532440070335	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTGGAGTCGTCTCAT	NA	False	NA	17	True	AATAAA	-17	NA	107757853	107772387	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ENSMUST00000034398.12	chr9	-	2523	11	FSM	ENSMUSG00000031922.13	ENSMUST00000034398.12	2523	11	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_4	39.1587793476763	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCTAACAAAGGCTTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	13738403	13719089	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ENSMUST00000034400.5	chr8	+	4316	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	0	0	0	0	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	2673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACGGTTGCTTTTTTTTTT	NA	False	NA	17	True	AATAAA	-28	NA	107877271	107914103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ENSMUST00000034405.11	chr9	+	3286	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_1	46.9081733954962	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAATAATCTCATTCCCT	NA	False	NA	9	True	AATAAA	-27	NA	14695949	14745942	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ENSMUST00000034413.8	chr9	+	1991	4	FSM	ENSMUSG00000031937.8	ENSMUST00000034413.8	1991	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	3.68178700572909	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGCAAGTTTGTTTTTC	NA	False	NA	NA	False	ATTAAA	-1	NA	15150340	15170712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_15150655_15168525_15168853_15168946_15169088_15169503
ENSMUST00000034414.10	chr9	-	2562	8	FSM	ENSMUSG00000031938.16	ENSMUST00000034414.10	2562	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	3.8703477668983	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTCTTTTCTTTC	NA	False	NA	-7	True	AATAAA	-15	NA	15212852	15194634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_15196288_15198651_15198769_15201962_15202113_15203295_15203473_15205727_15205830_15205981_15206056_15209138_15209238_15212662
ENSMUST00000034426.14	chr8	-	2008	14	FSM	ENSMUSG00000031948.15	ENSMUST00000034426.14	2008	14	0	0	0	0	multi-exon	FALSE	canonical	3	1149	junction_10	189.523538373557	3767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737955	112720074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
ENSMUST00000034427.12	chr8	-	3159	10	FSM	ENSMUSG00000031949.18	ENSMUST00000034427.12	3159	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	12.5521135891752	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGTAACATTTTTTAAT	NA	False	NA	-10	True	ATTAAA	-5	NA	112718934	112693539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_112695177_112698736_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
ENSMUST00000034428.8	chr8	+	1677	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	0	0	0	0	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	18273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACATGTACT	NA	False	NA	NA	False	NA	NA	NA	112667334	112680244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
ENSMUST00000034429.9	chr8	-	2984	7	FSM	ENSMUSG00000031951.9	ENSMUST00000034429.9	2984	7	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	6.79256129077161	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCCCTTGGCTTCTGAA	NA	False	NA	-4	True	ATTAAA	-15	NA	112660513	112638642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
ENSMUST00000034432.7	chr8	-	1178	7	FSM	ENSMUSG00000031954.7	ENSMUST00000034432.7	1178	7	0	0	0	0	multi-exon	FALSE	canonical	3	1827	junction_5	79.8013157786261	3918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580923	112495122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ENSMUST00000034457.9	chr8	+	5853	9	FSM	ENSMUSG00000031976.15	ENSMUST00000034457.9	5853	9	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	25.7533371623951	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTATTCTGCTGGGTAG	NA	False	NA	21	True	AATAAA	-25	NA	124750132	124775244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ENSMUST00000034460.11	chr8	+	2825	18	FSM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_7	26.4246660485719	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125247505	125278747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ENSMUST00000034463.4	chr8	+	1165	6	FSM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	35.5111250173801	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAGGTTGTCTTTTGAA	NA	False	NA	21	True	AATAAA	-30	NA	125448877	125460862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535_125458681_125460545
ENSMUST00000034466.10	chr8	+	2984	16	FSM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_6	36.0101220337961	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAATGGTCTTATTAAC	5120	False	NA	34	True	AATAAA	-25	NA	125589771	125616796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ENSMUST00000034472.16	chr9	-	1942	9	FSM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	42.8396355610082	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27066689	27008679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
ENSMUST00000034478.3	chr9	-	3259	19	FSM	ENSMUSG00000031995.10	ENSMUST00000034478.3	3259	19	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_11	45.3756610671839	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTGCTATACT	NA	False	NA	0	True	AGTAAA	-24	NA	31043149	31000697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ENSMUST00000034524.5	chr9	-	1077	7	FSM	ENSMUSG00000032026.8	ENSMUST00000034524.5	1077	7	0	0	0	0	multi-exon	FALSE	canonical	3	1058	junction_4	53.1959167188193	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCGGCACCCTCTGCTC	NA	False	NA	-1	True	AATAAA	-26	NA	48391911	48379811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701_48385814_48386419_48386498_48390609_48390694_48391706
ENSMUST00000034537.8	chr9	-	2095	11	FSM	ENSMUSG00000032038.8	ENSMUST00000034537.8	2095	11	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	8.15107354892593	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGGGGCTCTGTGT	NA	False	NA	-2	True	ATTAAA	-24	NA	35028169	34957871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
ENSMUST00000034539.12	chr9	-	1274	6	FSM	ENSMUSG00000032040.16	ENSMUST00000034539.12	1274	6	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_4	33.1083071146804	2237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTGTAGCCCAGTAG	NA	False	NA	-3	True	AATAAA	-22	NA	35087357	35035703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_35036141_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
ENSMUST00000034541.12	chr9	+	2993	14	FSM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_4	138.528744373691	2014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAGGTTCATATTATTT	5512	False	NA	3	True	AATAAA	-18	NA	35122450	35128310	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ENSMUST00000034543.5	chr9	+	1821	7	FSM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	10.6052921799554	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAATTTTTTGAGAT	NA	False	NA	NA	False	NA	NA	NA	35179160	35187261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
ENSMUST00000034567.4	chr9	-	4035	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	0	0	0	0	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATCTGTTGGTAGTT	NA	False	NA	-1	True	ATTAAA	-26	NA	50571080	50545932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUST00000034568.7	chr9	-	895	5	FSM	ENSMUSG00000032065.7	ENSMUST00000034568.7	895	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	2.27760839478607	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATATTTCCATTTGATT	6977	False	NA	NA	False	AATAAA	-21	NA	50472610	50468224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_50468792_50469548_50469601_50469686_50469799_50470519_50470599_50472525
ENSMUST00000034570.7	chr9	-	1046	6	FSM	ENSMUSG00000032067.7	ENSMUST00000034570.7	1046	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	16.1294761229248	561	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTTTTCAGGATTTATT	7959	False	NA	NA	False	AATAAA	-18	NA	50439951	50432916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561_50436585_50438169_50438250_50439856
ENSMUST00000034600.5	chr9	+	3107	6	FSM	ENSMUSG00000032092.6	ENSMUST00000034600.5	3107	6	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_5	54.042205728486	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGATTTTTATTATTTGC	NA	False	NA	15	True	AATAAA	-18	NA	44953722	44965313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
ENSMUST00000034615.10	chr9	+	2019	4	FSM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	6.68331255192114	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGACCCTTTAGAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	35470755	35478697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
ENSMUST00000034623.8	chr9	-	1220	5	FSM	ENSMUSG00000032112.11	ENSMUST00000034623.8	1220	5	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_4	135.857462069626	3385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTCTCCTAACTGAT	1473	False	NA	-8	True	AATAAA	-17	NA	44318897	44315055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100_44318276_44318423
ENSMUST00000034625.12	chr9	-	3397	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGACAGCTATATTTACA	648	False	NA	NA	False	NA	NA	NA	36637954	36619777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
ENSMUST00000034630.15	chr9	+	1794	10	FSM	ENSMUSG00000032118.17	ENSMUST00000034630.15	1794	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	5.61743318211757	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCATGGTTTTTGGAGA	NA	False	NA	18	True	AATAAA	-18	NA	36743979	36790220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_36744208_36754957_36755314_36761642_36761743_36772107_36772195_36774792_36774962_36778991_36779264_36780143_36780225_36781776_36781853_36787592_36787659_36789861
ENSMUST00000034644.10	chr9	-	3536	16	FSM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	77.9168787875901	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTTCTGGATAGCCTC	6378	False	NA	NA	False	AATATA	-16	NA	44272967	44259045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271285_44272741
ENSMUST00000034650.15	chr9	+	2989	16	FSM	ENSMUSG00000032135.16	ENSMUST00000034650.15	2989	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	5.20085463062456	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGTTCCATTCAT	78	False	NA	19	True	AATAAA	-21	NA	44045858	44054024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44046054_44047814_44047946_44048034_44048243_44048335_44048407_44048514_44048603_44050131_44050312_44050454_44050577_44050696_44050860_44050949_44051069_44051156_44051299_44051433_44051556_44051658_44051801_44051894_44051991_44052141_44052290_44052571_44052690_44053080
ENSMUST00000034697.8	chr9	+	3456	22	FSM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_21	32.3776608971381	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTGGTATGCTTA	5736	False	NA	16	True	AATAAA	-16	NA	21249123	21266321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ENSMUST00000034698.9	chr9	-	1378	4	FSM	ENSMUSG00000032180.12	ENSMUST00000034698.9	1378	4	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_2	14.8548533034381	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	False	NA	-5	True	AATAAA	-19	NA	21421548	21418850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21419688_21420226_21420411_21420549_21420648_21421289
ENSMUST00000034700.15	chr9	-	2174	8	FSM	ENSMUSG00000032182.16	ENSMUST00000034700.15	2174	8	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	11.8062591493682	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACGCCCATGGTGACCA	6068	False	NA	-16	True	AATAAA	-17	NA	21504124	21499977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823
ENSMUST00000034723.6	chr9	+	2264	14	FSM	ENSMUSG00000013584.6	ENSMUST00000034723.6	2264	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.4973358585766	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTTTGTGTTTGTGAG	NA	False	NA	NA	False	AATAAA	-24	NA	71123070	71203525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_71123246_71159879_71159985_71160197_71160339_71162315_71162446_71169012_71169075_71171068_71171198_71171314_71171429_71188885_71188989_71190659_71190845_71192135_71192301_71192397_71192556_71193201_71193277_71200887_71200977_71202892
ENSMUST00000034738.14	chr9	+	1543	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	4442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACATATCTCTTATTT	8580	False	NA	13	True	AATAAA	-18	NA	73020729	73030615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
ENSMUST00000034740.15	chr9	+	5499	29	FSM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	553.560943449088	4269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTCCGTTACCTAAA	NA	False	NA	NA	False	AATAAA	-27	NA	72569627	72657134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUST00000034742.8	chr9	-	1531	9	FSM	ENSMUSG00000032218.8	ENSMUST00000034742.8	1531	9	0	0	0	0	multi-exon	FALSE	canonical	3	1324	junction_2	68.4557338723353	3093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	False	NA	-8	True	AATAAA	-14	NA	70328829	70314973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ENSMUST00000034745.9	chr9	+	4625	28	FSM	ENSMUSG00000032220.11	ENSMUST00000034745.9	4625	28	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_9	20.3906969292862	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTCTTCATGACA	NA	False	NA	20	True	AATAAA	-20	NA	70114649	70307048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ENSMUST00000034761.15	chr9	+	4169	16	FSM	ENSMUSG00000032235.16	ENSMUST00000034761.15	4169	16	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	13.7737270030865	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTTGTTCTTTAGA	4652	False	NA	69	True	AATACA	-21	NA	69305187	69340404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ENSMUST00000034808.12	chr9	-	1043	3	FSM	ENSMUSG00000032271.14	ENSMUST00000034808.12	1043	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	2.5	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGCTCACTGTATG	NA	False	NA	10	True	ATTAAA	-33	NA	48516453	48503176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_48503663_48514653_48514862_48516104
ENSMUST00000034815.9	chr9	-	3398	23	FSM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_5	42.1913194628531	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854056	61824561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ENSMUST00000034830.9	chr9	+	802	4	FSM	ENSMUSG00000032291.9	ENSMUST00000034830.9	802	4	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_3	35.3679076125361	1680	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGGGCTCTTTCTTTGA	NA	False	NA	18	True	ATTAAA	-14	NA	54672031	54680394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_54672256_54672766_54672946_54675667_54675782_54680109
ENSMUST00000034834.16	chr9	+	2432	11	FSM	ENSMUSG00000032294.18	ENSMUST00000034834.16	2432	11	0	0	0	0	multi-exon	FALSE	canonical	3	15664	junction_5	1339.70741581884	39404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1664	False	NA	20	True	AATAAA	-20	NA	59563650	59586658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ENSMUST00000034836.16	chr9	+	3215	26	FSM	ENSMUSG00000032295.16	ENSMUST00000034836.16	3215	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	55.7568148301174	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTATAATGGTGCCTTG	NA	False	NA	13	True	AATAAA	-14	NA	57038053	57049487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046137_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ENSMUST00000034843.9	chr9	+	5770	22	FSM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_6	38.4690587449917	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTCGTTGTGTTTTAT	2626	False	NA	14	True	AATAAA	-19	NA	54771072	54819814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ENSMUST00000034846.7	chr9	-	4152	3	FSM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	39.5	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGATCTAGCTTTGTAC	NA	False	NA	-7	True	ATTAAA	-21	NA	57169895	57160399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_57161613_57163668_57166424_57169711
ENSMUST00000034848.14	chr9	+	1165	9	FSM	ENSMUSG00000032301.14	ENSMUST00000034848.14	1165	9	0	0	0	0	multi-exon	FALSE	canonical	3	1650	junction_8	116.746252616519	8873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGTGAAAGGATACTT	NA	False	NA	2	True	AATAAA	-15	NA	54858073	54865314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ENSMUST00000034856.15	chr9	-	1780	8	FSM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	33.2393914333151	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTCAGCCTTTGGTAT	8951	False	NA	-8	True	ATTAAA	-30	NA	57460046	57451538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
ENSMUST00000034859.15	chr9	+	2112	7	FSM	ENSMUSG00000032309.16	ENSMUST00000034859.15	2112	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	369.828526331987	1987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	False	NA	11	True	AATAAA	-18	NA	55116208	55131717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ENSMUST00000034866.9	chr9	-	1392	12	FSM	ENSMUSG00000032314.15	ENSMUST00000034866.9	1392	12	0	0	0	0	multi-exon	FALSE	canonical	3	1517	junction_8	89.5680174619608	3958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACTATCAGAAACATGC	NA	False	NA	-13	True	AATAAA	-30	NA	55419527	55361791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ENSMUST00000034868.14	chr1	-	1796	13	FSM	ENSMUSG00000026034.18	ENSMUST00000034868.14	1796	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	59.1577458063514	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	-12	True	AATAAA	-20	NA	58463225	58451158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58459279_58459371_58460241_58460468_58460932_58461094_58463078
ENSMUST00000034876.10	chr9	-	1716	7	FSM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_1	24.1522945769824	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTACATTTTAATTATT	NA	False	NA	-3	True	AATAAA	-17	NA	56068341	56043167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
ENSMUST00000034878.12	chr9	-	3658	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTGCTGTTTATGTGTC	NA	False	NA	-9	True	AATAAA	-14	NA	79700712	79676224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ENSMUST00000034879.5	chr9	+	3778	10	FSM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_9	43.8482230730809	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGACCAGTTTTGCT	NA	False	NA	11	True	ATTAAA	-17	NA	56325892	56404220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
ENSMUST00000034883.7	chr9	+	1984	7	FSM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	85.7729561108861	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGTGCAGCTGGCTG	NA	False	NA	11	True	AATAAA	-22	NA	58160446	58169803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_58160683_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ENSMUST00000034896.13	chr9	+	2366	12	FSM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_9	10.2457409010559	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTAGGTGATTTTACG	NA	False	NA	19	True	AATAAA	-18	NA	78355489	78381434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
ENSMUST00000034900.8	chr9	-	2138	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	0	0	0	0	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	12437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGATAAAGCTTTGCT	NA	False	NA	NA	False	NA	NA	NA	78286007	78283390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_78284974_78285256_78285440_78285635
ENSMUST00000034902.12	chr9	-	870	7	FSM	ENSMUSG00000057933.11	ENSMUST00000034902.12	870	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	11.4260910006684	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTCATAAGTTCTA	NA	False	NA	1	True	AATAAA	-17	NA	78254440	78238299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78249111_78249221_78254370
ENSMUST00000034903.7	chr9	+	977	7	FSM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	0	0	0	0	multi-exon	FALSE	canonical	3	2717	junction_1	326.320735201155	24596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	False	NA	17	True	ATTAAA	-16	NA	78099228	78116631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_78099347_78105551_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ENSMUST00000034904.14	chr9	+	2782	8	FSM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_6	44.3764048354804	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCTTCTGTTGTTTG	NA	False	NA	11	True	ATTAAA	-19	NA	77824645	77891801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_77824809_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
ENSMUST00000034920.11	chr9	-	2310	22	FSM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_19	9.60607328677695	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	False	NA	-1	True	AATAAA	-18	NA	63285184	63071049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ENSMUST00000034945.6	chr9	+	1240	5	FSM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_3	21.6376408140999	3753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTCACCTTAGGTTTT	1383	False	NA	17	True	AATAAA	-18	NA	66033892	66046237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583_66043630_66045618
ENSMUST00000034946.15	chr9	-	2073	15	FSM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	0	0	0	0	multi-exon	FALSE	canonical	2	266	junction_13	37.3054135153468	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACTGGGCATGGTAGCA	NA	False	NA	-4	True	AATAAA	-20	NA	66032168	65995414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
ENSMUST00000034947.7	chr9	+	892	5	FSM	ENSMUSG00000032383.8	ENSMUST00000034947.7	892	5	0	0	0	0	multi-exon	FALSE	canonical	3	2090	junction_4	160.535626886994	13167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGGTGTGGGCTGTGT	1574	False	NA	16	True	AATAAA	-16	NA	65967512	65973905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65967683_65968748_65968863_65970270_65970365_65972768_65972954_65973576
ENSMUST00000034953.14	chr5	-	764	4	FSM	ENSMUSG00000059518.15	ENSMUST00000034953.14	764	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	111.749720357592	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTCATTCTGGG	NA	False	NA	2	True	AATAAA	-18	NA	137015683	137011047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137011542_137011721_137011802_137013732_137013904_137015664
ENSMUST00000034964.7	chr9	+	1211	8	FSM	ENSMUSG00000032397.8	ENSMUST00000034964.7	1211	8	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_1	675.401679425976	6817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9569	False	NA	14	True	AATAAA	-14	NA	64188888	64212074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_64188935_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUST00000034966.9	chr9	+	1538	10	FSM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	0	0	0	0	multi-exon	FALSE	canonical	3	16882	junction_3	1427.06559842995	125984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGCTTTGTTCCACATG	NA	False	NA	16	True	AATAAA	-13	NA	64080656	64085948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ENSMUST00000034983.7	chr9	-	1994	7	FSM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_2	81.5754592727222	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAACACATGATGGAGT	NA	False	NA	-10	True	AATAAA	-41	NA	96246495	96214707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
ENSMUST00000034986.14	chr9	-	1790	10	FSM	ENSMUSG00000032415.15	ENSMUST00000034986.14	1790	10	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_5	4.12160822022031	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCTTTTGTTCTTTAT	NA	False	NA	0	True	ATTAAA	-26	NA	86347003	86189358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317407_86322638_86322808_86330815_86330907_86333866_86334064_86346793
ENSMUST00000034988.10	chr9	+	1355	3	FSM	ENSMUSG00000032417.11	ENSMUST00000034988.10	1355	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	22.5	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTGTCTCAAGTCCAA	NA	False	NA	6	True	AATAAA	-19	NA	86454068	86456952	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_86454271_86454889_86455117_86456026
ENSMUST00000035007.10	chr9	+	3383	4	FSM	ENSMUSG00000032434.10	ENSMUST00000035007.10	3383	4	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_3	12.8322510366134	557	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTGCCTTCACAGTT	NA	False	NA	19	True	AATAAA	-15	NA	114560240	114578412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_114560442_114566250_114566428_114569126_114569226_114575506
ENSMUST00000035009.16	chr9	-	993	5	FSM	ENSMUSG00000032436.18	ENSMUST00000035009.16	993	5	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_1	123.353911571543	2152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCCTTATTGCATGAGA	NA	False	NA	-14	True	AATAAA	-16	NA	114610917	114585903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
ENSMUST00000035024.8	chr9	-	4043	3	FSM	ENSMUSG00000032449.14	ENSMUST00000035024.8	4043	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	641	709	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGATTTTATAATGGT	77	False	NA	-4	True	ATTAAA	-37	NA	96966523	96957617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_96961293_96962245_96962536_96966445
ENSMUST00000035034.10	chr9	-	1197	8	FSM	ENSMUSG00000032459.10	ENSMUST00000035034.10	1197	8	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_2	42.1929484387994	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGTAATTCGTTTTT	NA	False	NA	-9	True	ATTAAA	-20	NA	98483713	98470782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_98470980_98472087_98472197_98474607_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
ENSMUST00000035038.8	chr9	+	1019	5	FSM	ENSMUSG00000032463.11	ENSMUST00000035038.8	1019	5	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	16.8430252627015	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGGTTTGGTTTCATG	3544	False	NA	9	True	AATAAA	-23	NA	98868425	98884074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_98868566_98874153_98874287_98874565_98874795_98881019_98881070_98883607
ENSMUST00000035043.12	chr9	-	4647	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_7	54.8151294142266	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTTCCAAGTGACTG	NA	False	NA	6	True	AATAAA	-35	NA	99450952	99360424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ENSMUST00000035053.12	chr9	+	1074	7	FSM	ENSMUSG00000032478.15	ENSMUST00000035053.12	1074	7	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	146.935359937627	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGCAAGCTTTCTCT	NA	False	NA	25	True	AATAAA	-32	NA	109661825	109672042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_109661876_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ENSMUST00000035055.15	chr9	+	6091	19	FSM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	32.471877671397	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTCTGTCCTCTTAG	NA	False	NA	25	True	AATAAA	-25	NA	109760527	109913023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ENSMUST00000035069.14	chr9	-	1223	5	FSM	ENSMUSG00000032491.15	ENSMUST00000035069.14	1223	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	3.96074487943871	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTTGGCTCCTTGGACC	8924	False	NA	-5	True	ATTAAA	-25	NA	110453520	110450202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452304_110453382
ENSMUST00000035075.13	chr9	-	1932	6	FSM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	0	0	0	0	multi-exon	FALSE	canonical	3	3873	junction_3	373.6995584691	11816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775226	110768670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ENSMUST00000035076.9	chr9	+	3657	9	FSM	ENSMUSG00000032495.9	ENSMUST00000035076.9	3657	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	105.561593394568	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTCCACGTGTGTTC	NA	False	NA	8	True	AATAAA	-19	NA	110780612	110813134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_110780745_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ENSMUST00000035079.10	chr9	-	2754	19	FSM	ENSMUSG00000032498.10	ENSMUST00000035079.10	2754	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	91.190277259512	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100859	111057322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ENSMUST00000035092.7	chr9	-	1960	6	FSM	ENSMUSG00000032508.9	ENSMUST00000035092.7	1960	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	6.61513416341649	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGACTGACGGTATGTG	NA	False	NA	1	True	AATAAA	-26	NA	119169107	119164999	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_119165966_119166400_119166577_119166819_119166912_119167071_119167253_119167641_119167777_119168697
ENSMUST00000035101.9	chr9	-	2906	5	FSM	ENSMUSG00000032515.9	ENSMUST00000035101.9	2906	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	11.4972822875669	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTCTTCTTGGTGAGG	NA	False	NA	2	True	AATAAA	-17	NA	119813509	119800228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813471
ENSMUST00000035113.11	chr9	+	577	3	FSM	ENSMUSG00000032526.12	ENSMUST00000035113.11	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	21	1758	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCCCATGTCAACT	NA	False	NA	11	True	AATAAA	-16	NA	121539394	121541987	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_121539538_121539704_121539782_121541630
ENSMUST00000035116.12	chr9	-	2320	15	FSM	ENSMUSG00000032527.14	ENSMUST00000035116.12	2320	15	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_12	14.4016722385043	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTGTTGTTTTTTTAT	NA	False	NA	0	True	NA	NA	NA	100916951	100864084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
ENSMUST00000035157.10	chr9	-	3064	7	FSM	ENSMUSG00000032553.15	ENSMUST00000035157.10	3064	7	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_6	16.5873110807294	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCTTTTATTTGG	NA	False	NA	NA	False	NA	NA	NA	103079336	103065230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ENSMUST00000035158.16	chr9	-	2571	17	FSM	ENSMUSG00000032554.16	ENSMUST00000035158.16	2571	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	9.88982273602515	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTCCTGAGCTCAAG	NA	False	NA	73	True	TATAAA	-6	NA	103107643	103085993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_103086278_103087693_103087878_103089010_103089196_103092391_103092457_103093012_103093143_103094561_103094733_103096421_103096455_103097000_103097092_103098091_103098244_103099249_103099428_103100133_103100313_103100782_103100839_103102241_103102375_103103159_103103337_103104036_103104146_103105094_103105268_103107372
ENSMUST00000035166.12	chr9	-	2404	12	FSM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_1	40.2171790110061	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCTTTGAGATTCTAG	NA	False	NA	-13	True	AATAAA	-18	NA	103940333	103923797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
ENSMUST00000035194.8	chr9	-	2816	11	FSM	ENSMUSG00000032577.17	ENSMUST00000035194.8	2816	11	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_10	23.3752005338992	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGGGTTTCTTTATGT	NA	False	NA	-2	True	AATAAA	-24	NA	107167076	107132125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
ENSMUST00000035196.14	chr9	-	2192	11	FSM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_9	21.6296093353532	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTGCCTCTTTTCACG	NA	False	NA	NA	False	NA	NA	NA	107215549	107204282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215479
ENSMUST00000035199.13	chr9	-	3064	25	FSM	ENSMUSG00000032580.13	ENSMUST00000035199.13	3064	25	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_9	145.554250815823	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTTCCTGTGTCTTTA	9714	False	NA	-6	True	AAGAAA	-12	NA	107648186	107617698	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626996_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ENSMUST00000035211.14	chr9	+	2262	18	FSM	ENSMUSG00000032591.16	ENSMUST00000035211.14	2262	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	9.09998288906715	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGTGCTTCTTAGTTTC	6663	False	NA	18	True	CATAAA	-23	NA	107957634	107962202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107958898_107958981_107959119_107959199_107959321_107959401_107959521_107959663_107959860_107960018_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107960902_107961062_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
ENSMUST00000035222.6	chr9	+	1783	9	FSM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_8	102.171118717571	2312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCGTGTGATATTTTCT	5077	False	NA	3	True	NA	NA	NA	108539296	108561840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
ENSMUST00000035227.8	chr9	+	2133	6	FSM	ENSMUSG00000032606.8	ENSMUST00000035227.8	2133	6	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	4.63033476111609	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTCAGCTGCTTGT	NA	False	NA	14	True	NA	NA	NA	108167627	108173697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108167862_108170534_108170712_108171129_108171244_108171644_108171717_108172087_108172193_108172266
ENSMUST00000035230.7	chr9	+	2082	9	FSM	ENSMUSG00000032607.13	ENSMUST00000035230.7	2082	9	0	0	0	0	multi-exon	TRUE	canonical	3	166	junction_5	15.4029218007494	2388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTCTAGCTTCCTTG	NA	False	NA	21	True	AATAAA	-22	NA	108174068	108179501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108174225_108174326_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
ENSMUST00000035237.12	chr9	+	3662	22	FSM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_19	65.884562002066	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTCCACGTTAGCTT	NA	False	NA	64	True	CATAAA	-21	NA	108225051	108269744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ENSMUST00000035240.7	chr11	+	2260	3	FSM	ENSMUSG00000057219.12	ENSMUST00000035240.7	2260	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTGTGCTAGTCTCC	NA	False	NA	NA	False	ATTAAA	-22	NA	115366492	115381293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_115366854_115366947_115367092_115379538
ENSMUST00000035266.11	chr11	+	2022	3	FSM	ENSMUSG00000078853.9	ENSMUST00000035266.11	2022	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTCTCTTCTTATCT	NA	False	NA	NA	False	AATAAA	-41	NA	58090381	58098417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_58090606_58092293_58092544_58096869
ENSMUST00000035269.15	chr19	+	2874	20	FSM	ENSMUSG00000032648.15	ENSMUST00000035269.15	2874	20	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	7.04005162408672	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCTCTGTTGCAAAATA	NA	False	NA	14	True	AATAAA	-24	NA	6434428	6448489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6434752_6435714_6435817_6435895_6435975_6436053_6436158_6436403_6436536_6438092_6438205_6438296_6438380_6438766_6438911_6439189_6439283_6439485_6439633_6439802_6439967_6440360_6440476_6440969_6441072_6441362_6441511_6442708_6442768_6442877_6443020_6443745_6443954_6447607_6447743_6447895_6447963_6448074
ENSMUST00000035276.5	chr7	-	676	3	FSM	ENSMUSG00000042462.5	ENSMUST00000035276.5	676	3	0	0	0	0	multi-exon	FALSE	canonical	3	3852	junction_1	65	16175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCGATTTTTCTTGAGT	2490	False	NA	-1	True	AATAAA	-18	NA	126859881	126856130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126856509_126858529_126858641_126859694
ENSMUST00000035279.4	chr5	+	2836	14	FSM	ENSMUSG00000042328.14	ENSMUST00000035279.4	2836	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	21.6682900317355	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTGATCAGCTAGCA	NA	False	NA	9	True	AATAAA	-15	NA	112490960	112526280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_112491030_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ENSMUST00000035283.11	chr11	-	2450	17	FSM	ENSMUSG00000040667.12	ENSMUST00000035283.11	2450	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	230.176562664403	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70860788	70833907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835407_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUST00000035295.6	chr1	-	2048	3	FSM	ENSMUSG00000038633.6	ENSMUST00000035295.6	2048	3	0	0	0	0	multi-exon	FALSE	canonical	3	1138	junction_1	20.5	2582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGTGTCACTGGAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	182110369	182103336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_182104459_182106540_182107284_182110186
ENSMUST00000035301.7	chr4	+	1135	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	0	0	0	0	multi-exon	FALSE	canonical	3	4249	junction_2	22.5	15882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAGCAGAATTTCATCT	NA	False	NA	NA	False	AATACA	-20	NA	63463008	63468987	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_63463237_63466821_63466923_63468181
ENSMUST00000035350.12	chr11	-	3998	9	FSM	ENSMUSG00000049659.16	ENSMUST00000035350.12	3998	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	17.066048165876	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTTTTGTCTTTGTA	9260	False	NA	NA	False	AATAAA	-16	NA	20691589	20635083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_20636199_20642464_20642589_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
ENSMUST00000035375.14	chr17	-	1371	5	FSM	ENSMUSG00000032717.15	ENSMUST00000035375.14	1371	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	1.78535710713571	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCATCTCCCCAGGACTC	2092	False	NA	-10	True	AATAAA	-14	NA	48144216	48126260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_48127090_48131738_48131967_48135472_48135653_48143868_48143956_48144169
ENSMUST00000035395.14	chr7	+	836	6	FSM	ENSMUSG00000030649.19	ENSMUST00000035395.14	836	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	222.801615793064	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATGTCTATTCCCTGTT	7749	False	NA	21	True	AATAAA	-21	NA	101545546	101548747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_101545658_101546939_101546995_101547153_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUST00000035426.7	chr16	+	1611	2	FSM	ENSMUSG00000079737.5	ENSMUST00000035426.7	1611	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTACTTTGGTATCT	NA	False	NA	NA	False	ATTAAA	-32	NA	13489883	13496249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13489943_13494697
ENSMUST00000035458.15	chr7	-	4685	12	FSM	ENSMUSG00000030850.18	ENSMUST00000035458.15	4685	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	43.8843333177548	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	False	NA	-15	True	AATAAA	-16	NA	130121260	129993222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ENSMUST00000035481.5	chr2	+	1325	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	75.455652906562	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTAGGTTTGTGTGTT	3825	False	NA	45	True	NA	NA	NA	128971619	128976054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
ENSMUST00000035493.14	chr6	+	2147	4	FSM	ENSMUSG00000042079.14	ENSMUST00000035493.14	2147	4	0	0	0	0	multi-exon	FALSE	canonical	3	2150	junction_1	1335.10981654028	11736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGCACAGCTTATGTA	3734	False	NA	NA	False	AATAAA	-14	NA	117883755	117902580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_117883801_117894430_117894560_117896059_117896121_117900668
ENSMUST00000035495.15	chr8	-	4485	43	FSM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_17	20.5305065860605	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTGGCCTTATTGT	NA	False	NA	-4	True	AAGAAA	-17	NA	124045315	123995038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ENSMUST00000035559.11	chrX	-	3384	6	FSM	ENSMUSG00000033436.14	ENSMUST00000035559.11	3384	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	12.1556571192182	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTGTTCTGGTGCTT	NA	False	NA	-3	True	AATAAA	-19	NA	133709745	133704895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_133707763_133708010_133708077_133708202_133708263_133708369_133708475_133708983_133709192_133709667
ENSMUST00000035597.10	chr10	+	2869	15	FSM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	7.35298079221021	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTCCTGTCCTGTGAG	NA	False	NA	11	True	ATTAAA	-19	NA	80691108	80704542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702495_80703233
ENSMUST00000035604.13	chr11	-	4922	28	FSM	ENSMUSG00000037275.15	ENSMUST00000035604.13	4922	28	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_2	43.3607067704434	353	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTCTCGTTCTGTGG	NA	False	NA	-34	True	TATAAA	-12	NA	58059365	58012115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ENSMUST00000035612.7	chr14	-	3725	21	FSM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	38.4373191052654	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGAGTCTTTGTAG	NA	False	NA	44	True	AATAAA	-18	NA	70391260	70375616	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ENSMUST00000035673.8	chr6	+	2792	3	FSM	ENSMUSG00000033933.14	ENSMUST00000035673.8	2792	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	12	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGTGTTGTGTTACCT	158	False	NA	19	True	AATAAA	-19	NA	113600919	113608594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113601340_113605052_113605176_113606345
ENSMUST00000035700.14	chr9	+	3277	11	FSM	ENSMUSG00000032936.14	ENSMUST00000035700.14	3277	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	7.3729234364667	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTTGCCTTTGCTTCCT	NA	False	NA	18	True	AATAAA	-26	NA	107812872	107826890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
ENSMUST00000035716.15	chr19	+	2219	17	FSM	ENSMUSG00000032946.17	ENSMUST00000035716.15	2219	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	88.109218445064	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCTAAAACCCTCTGAT	NA	False	NA	25	True	AATAAA	-27	NA	6450591	6465246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6450682_6451745_6451894_6452501_6452605_6453053_6453117_6453461_6453594_6454329_6454481_6454683_6454858_6454967_6455085_6457070_6457353_6458200_6458279_6458477_6458601_6458868_6458985_6463114_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
ENSMUST00000035721.14	chr2	-	3522	10	FSM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGTGCTGCTTGATTCA	NA	False	NA	98	True	AGTAAA	-23	NA	4656897	4626868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
ENSMUST00000035725.7	chr6	+	1095	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_2	10.5	5893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATGTTTATGATCTGTT	NA	False	NA	11	True	AATAAA	-21	NA	113581732	113593912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113581858_113592736_113592820_113593025
ENSMUST00000035735.11	chr10	+	934	4	FSM	ENSMUSG00000040280.11	ENSMUST00000035735.11	934	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	3.29983164553722	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGCGCCTGCTAATCA	NA	False	NA	NA	False	AATACA	-21	NA	127350835	127353023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127350908_127351267_127351357_127352133_127352195_127352311
ENSMUST00000035771.5	chr7	-	1309	7	FSM	ENSMUSG00000042502.11	ENSMUST00000035771.5	1309	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	224.819680830858	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCCTTTTGGCTTCAC	5583	False	NA	-4	True	AATAAA	-40	NA	126795047	126792829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794640_126794958
ENSMUST00000035775.9	chr10	-	468	4	FSM	ENSMUSG00000035215.10	ENSMUST00000035775.9	468	4	0	0	0	0	multi-exon	FALSE	canonical	3	2872	junction_3	751.769616009822	15149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTGCTCTGTAACTTT	NA	False	NA	-13	True	AATAAA	-25	NA	80691043	80688658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80688935_80689591_80689664_80690451_80690543_80691014
ENSMUST00000035776.10	chr3	+	2429	7	FSM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	0	0	0	0	multi-exon	FALSE	canonical	3	1082	junction_6	112.264073604258	3277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGCCTCTTGGAATAA	NA	False	NA	23	True	AATAAA	-19	NA	122068036	122078920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_122068128_122068846_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
ENSMUST00000035780.4	chr4	+	1915	9	FSM	ENSMUSG00000035069.4	ENSMUST00000035780.4	1915	9	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	14.2560294261761	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGCCTTAGTTTGTAG	42	False	NA	16	True	AATAAA	-28	NA	103171008	103223640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
ENSMUST00000035785.9	chr3	+	1189	5	FSM	ENSMUSG00000041355.14	ENSMUST00000035785.9	1189	5	0	0	0	0	multi-exon	FALSE	canonical	3	4285	junction_2	286.022180083993	13248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTCTTGCGTCAA	3620	False	NA	15	True	AATAAA	-17	NA	88486977	88495726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ENSMUST00000035804.9	chr18	-	1595	5	FSM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	18.3166590840142	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATGCACATGTTTTT	2577	False	NA	8	True	AATAAA	-30	NA	46861462	46846259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_46847029_46848663_46848834_46853353_46853509_46856384_46856463_46861039
ENSMUST00000035844.11	chr7	+	930	5	FSM	ENSMUSG00000038695.14	ENSMUST00000035844.11	930	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	25.2326673183792	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCCTGGGCTCAGCTC	4742	False	NA	24	True	AATAAA	-16	NA	44117403	44121076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44117615_44118233_44118394_44119835_44119962_44120536_44120732_44120838
ENSMUST00000035852.14	chr5	+	2222	17	FSM	ENSMUSG00000037108.14	ENSMUST00000035852.14	2222	17	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	16.2498798072478	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCTTTGTGTGTGTGT	7077	False	NA	32	True	AATAAA	-25	NA	137786059	137820883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
ENSMUST00000035861.6	chr6	-	3139	16	FSM	ENSMUSG00000005069.13	ENSMUST00000035861.6	3139	16	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	30.6939009504422	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTGACGTGGGTAGGT	NA	False	NA	-16	True	AATAAA	-29	NA	124391996	124373790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381203_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
ENSMUST00000035925.7	chr8	-	1246	5	FSM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	2.91547594742265	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCCTGGTGGTTTTTCTG	NA	False	NA	-6	True	NA	NA	NA	106937565	106927348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996_106937264_106937350
ENSMUST00000035973.5	chrX	-	2996	7	FSM	ENSMUSG00000036782.14	ENSMUST00000035973.5	2996	7	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_6	147.505272975428	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGTGCCATGCC	NA	False	NA	-23	True	AATAAA	-14	NA	23181418	23085524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368
ENSMUST00000035985.8	chr5	-	2831	5	FSM	ENSMUSG00000066640.12	ENSMUST00000035985.8	2831	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	6.28490254498827	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTCTCCAGGATGTT	NA	False	NA	-2	True	NA	NA	NA	142880993	142857543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_142858276_142864412_142864632_142871293_142872838_142874423_142874631_142880864
ENSMUST00000036004.16	chr15	+	1918	11	FSM	ENSMUSG00000046434.17	ENSMUST00000036004.16	1918	11	0	0	0	0	multi-exon	FALSE	canonical	3	2223	junction_7	4396.07925429012	36632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148858	103153382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
ENSMUST00000036023.3	chr3	-	593	2	FSM	ENSMUSG00000037910.3	ENSMUST00000036023.3	593	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTTTAGATGTGTCT	NA	False	NA	0	True	AATAAA	-42	NA	48563537	48560166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_48560355_48563132
ENSMUST00000036125.10	chr5	-	2367	6	FSM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	0	0	0	0	multi-exon	FALSE	canonical	3	1750	junction_2	182.920310517996	2748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTATGCTTGTCTTTCTGG	10021	False	NA	-4	True	AATAAA	-18	NA	134668201	134648730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_134650503_134650802_134650941_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ENSMUST00000036126.7	chr14	+	1894	16	FSM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_5	52.2695577431708	1828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045297	51058758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ENSMUST00000036158.7	chr18	+	2462	3	FSM	ENSMUSG00000033272.13	ENSMUST00000036158.7	2462	3	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	96	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACAGTTGTCCTGTCTTC	NA	False	NA	16	True	AATAAA	-34	NA	36812644	36816911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_36812677_36813568_36813668_36814580
ENSMUST00000036210.7	chr16	-	2758	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	2065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGGCTCCTCATTTACT	6230	False	NA	-1	True	NA	NA	NA	38370620	38345498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ENSMUST00000036320.12	chr11	+	1790	9	FSM	ENSMUSG00000034175.14	ENSMUST00000036320.12	1790	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	83.1500901983876	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5049438	5056091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055180_5055314_5055432_5055718_5055799
ENSMUST00000036333.14	chrX	-	4146	9	FSM	ENSMUSG00000035725.14	ENSMUST00000036333.14	4146	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	6.21992765231236	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTATTTGGGAGAGGGA	NA	False	NA	NA	False	NA	NA	NA	76839884	76805016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76814949_76816721_76816842_76825643_76825908_76829733_76829903_76839153
ENSMUST00000036354.7	chrX	-	2563	2	FSM	ENSMUSG00000034403.17	ENSMUST00000036354.7	2563	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAATGGCATCATTTGG	NA	False	NA	-4	True	ATTAAA	-22	NA	98514298	98509719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_98512207_98514222
ENSMUST00000036360.13	chr3	-	752	6	FSM	ENSMUSG00000038543.14	ENSMUST00000036360.13	752	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	8.93532316147547	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTGCCTACTTCTTA	NA	False	NA	NA	False	NA	NA	NA	95799267	95791269	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95791550_95792281_95792381_95795452_95795609_95796168_95796228_95797034_95797122_95799196
ENSMUST00000036376.13	chr11	+	1939	4	FSM	ENSMUSG00000034757.16	ENSMUST00000036376.13	1939	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	22.5437845585479	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCTTTGTGACTGC	NA	False	NA	16	True	AATAAA	-18	NA	102175756	102180063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_102175915_102176489_102176545_102178133_102178698_102178901
ENSMUST00000036380.14	chr4	-	1000	8	FSM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	0	0	0	0	multi-exon	FALSE	canonical	3	2123	junction_7	187.196393650942	5715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744526	117741522	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744366
ENSMUST00000036418.10	chr3	-	1398	6	FSM	ENSMUSG00000038550.11	ENSMUST00000036418.10	1398	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_5	32.3604697122894	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGCTTTTTTTTTTTT	NA	False	NA	-3	True	ATTAAA	-13	NA	95789543	95785816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789466
ENSMUST00000036426.13	chr9	+	3444	2	FSM	ENSMUSG00000033491.14	ENSMUST00000036426.13	3444	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	4950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTACTGTGTTTGTATA	NA	False	NA	4	True	AATAAA	-19	NA	86625701	86640496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_86625860_86637210
ENSMUST00000036437.13	chr5	+	3431	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_1	44.6738178355063	2466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATCTTTATTCTATT	NA	False	NA	NA	False	ATTAAA	-31	NA	96357973	96414568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ENSMUST00000036470.14	chr2	-	1870	4	FSM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	9.0921211313239	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAAAGATTTTCT	NA	False	NA	NA	False	NA	NA	NA	118859874	118848259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_118849646_118852549_118852707_118857618_118857869_118859797
ENSMUST00000036473.16	chr2	+	2918	20	FSM	ENSMUSG00000039254.17	ENSMUST00000036473.16	2918	20	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_15	17.3977423950124	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATGTTATTTATTGA	NA	False	NA	17	True	AATAAA	-18	NA	32126601	32145017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUST00000036561.8	chr9	+	3845	19	FSM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_17	23.7904950415284	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGTGCTGGACATGT	NA	False	NA	29	True	AATAAA	-17	NA	119723943	119755652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ENSMUST00000036572.4	chr4	-	1875	3	FSM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	4	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGACCTCATTCAGTCA	9800	False	NA	-6	True	AATAAA	-18	NA	141811615	141758302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_141759406_141764715_141765245_141811372
ENSMUST00000036576.10	chr10	+	2455	16	FSM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_12	10.0598210719674	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGAGTCCCTTCTTT	943	False	NA	NA	False	AATAAA	-24	NA	58333769	58412066	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58409410_58409550_58411510
ENSMUST00000036647.13	chr2	+	5053	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_9	41.0940655353327	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGGTTTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	121786481	121844123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ENSMUST00000036649.8	chr11	+	2607	7	FSM	ENSMUSG00000033983.15	ENSMUST00000036649.8	2607	7	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	22.1616535684702	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	NA	False	NA	15	True	AATAAA	-17	NA	88864760	88882439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ENSMUST00000036680.8	chr4	-	1124	4	FSM	ENSMUSG00000039759.11	ENSMUST00000036680.8	1124	4	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	10.8730042868667	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGGCTGTCACTCGGTT	NA	False	NA	-3	True	AATAAA	-16	NA	152073454	152067095	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_152067810_152068091_152068194_152070125_152070319_152073339
ENSMUST00000036682.9	chr14	-	2812	18	FSM	ENSMUSG00000033885.16	ENSMUST00000036682.9	2812	18	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_2	18.5091392369855	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTAGCTTTGCTAGGTA	NA	False	NA	0	True	AATAAA	-17	NA	14371562	14304655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_14305839_14314427_14314488_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
ENSMUST00000036720.9	chr17	+	1270	2	FSM	ENSMUSG00000033739.9	ENSMUST00000036720.9	1270	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTGGTCTGTGTTGTG	7359	False	NA	4	True	ATTAAA	-17	NA	34863737	34865298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34863928_34864218
ENSMUST00000036744.8	chr19	+	1783	4	FSM	ENSMUSG00000033760.18	ENSMUST00000036744.8	1783	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	20.1163283594862	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCTTAACTGAGTGGC	NA	False	NA	NA	False	AATAAA	-17	NA	4806598	4815968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4806690_4807273_4807698_4812004_4812676_4815371
ENSMUST00000036759.11	chr6	+	4307	31	FSM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	0	0	0	0	multi-exon	TRUE	canonical	3	196	junction_27	51.0355975983648	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGCATGGAAGCT	NA	False	NA	31	True	AATAAA	-34	NA	116184998	116239647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ENSMUST00000036805.7	chr10	-	1260	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	0	0	0	0	multi-exon	FALSE	canonical	3	943	junction_2	140.821021158064	1469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634460	80631932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ENSMUST00000036807.13	chr8	+	2295	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	13	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGCCCTGCTTTTTT	NA	False	NA	7	True	ATTAAA	-18	NA	26648168	26654179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_26648550_26650802_26650999_26652461
ENSMUST00000036825.14	chr13	-	1351	6	FSM	ENSMUSG00000034891.14	ENSMUST00000036825.14	1351	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	35.7636687156114	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCGCCGCCTAGGCAGG	NA	False	NA	-1	True	AATAAA	-16	NA	54914408	54906672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_54907355_54907680_54907771_54910455_54910575_54910734_54910774_54913375_54913506_54914117
ENSMUST00000036852.9	chr15	-	3896	22	FSM	ENSMUSG00000033762.9	ENSMUST00000036852.9	3896	22	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_12	16.3579572820053	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTTCTGGTAACATAG	NA	False	NA	-5	True	AATAAA	-19	NA	76594733	76587752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ENSMUST00000036862.5	chr12	+	2997	23	FSM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_22	24.2086317506725	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGTTTCTTCCTTCCA	NA	False	NA	12	True	AATAAA	-19	NA	31704867	31987629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643_31975791_31987175
ENSMUST00000036865.13	chr7	+	4645	38	FSM	ENSMUSG00000039187.17	ENSMUST00000036865.13	4645	38	0	0	0	0	multi-exon	TRUE	canonical	3	260	junction_14	37.7798783892034	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042059	79100012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ENSMUST00000036880.8	chr8	+	1642	13	FSM	ENSMUSG00000033862.8	ENSMUST00000036880.8	1642	13	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_10	22.2279853638006	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACAGTTTGGCAATCC	2125	False	NA	10	True	GATAAA	-11	NA	123951580	123958989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_123951708_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ENSMUST00000036928.12	chr1	-	1741	9	FSM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	19.7214984217731	382	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGGGCCAGATACCTT	5728	False	NA	-3	True	GATAAA	-18	NA	180845134	180817118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_180817546_180817957_180818084_180819497_180819607_180821443_180821653_180822192_180822323_180823513_180823742_180827287_180827469_180829363_180829552_180844991
ENSMUST00000036951.13	chr5	-	1240	4	FSM	ENSMUSG00000032959.13	ENSMUST00000036951.13	1240	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1275.14783456664	15737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGCGGGTATTTCCTT	NA	False	NA	-17	True	AATAAA	-15	NA	117425690	117420718	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_117421531_117423785_117423887_117424199_117424310_117425473
ENSMUST00000036952.5	chr11	+	2467	3	FSM	ENSMUSG00000036275.14	ENSMUST00000036952.5	2467	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	2	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATCTGCTTCTGTTAGT	4558	False	NA	NA	False	AATAAA	-11	NA	52287254	52299550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_52287431_52293872_52294385_52297771
ENSMUST00000036987.12	chr15	+	3223	20	FSM	ENSMUSG00000008690.16	ENSMUST00000036987.12	3223	20	0	0	0	0	multi-exon	TRUE	canonical	1	145	junction_1	244.22211859964	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTTGATCCTCTGGCT	NA	False	NA	6	True	AATAAA	-16	NA	89239921	89257029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_89240054_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUST00000036991.5	chr5	-	1816	3	FSM	ENSMUSG00000041548.5	ENSMUST00000036991.5	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	24.5	2011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGCTTCATTTAGCGA	NA	False	NA	0	True	AATAAA	-20	NA	116560923	116546549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_116547550_116553465_116553530_116560171
ENSMUST00000036996.6	chr8	+	623	3	FSM	ENSMUSG00000033938.6	ENSMUST00000036996.6	623	3	0	0	0	0	multi-exon	FALSE	canonical	3	2087	junction_2	87.5	8735	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTGTGCTACTTCAA	NA	False	NA	23	True	AATAAA	-23	NA	84293299	84298255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_84293560_84297458_84297628_84298061
ENSMUST00000037001.10	chr15	+	2502	9	FSM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	24.1761116600664	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	2335	False	NA	27	True	AGTAAA	-16	NA	100366903	100377045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUST00000037023.9	chr12	-	390	3	FSM	ENSMUSG00000034892.9	ENSMUST00000037023.9	390	3	0	0	0	0	multi-exon	FALSE	canonical	3	25458	junction_2	210	325798	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGTGTGTTTTGT	NA	False	NA	-10	True	AATAAA	-18	NA	69205960	69204495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_69204596_69205434_69205535_69205770
ENSMUST00000037056.9	chr5	-	540	5	FSM	ENSMUSG00000038690.16	ENSMUST00000037056.9	540	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	2948.80004196622	28003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATACTGCTTGCCTGGTGT	9969	False	NA	-13	True	AATAAA	-14	NA	145128402	145120518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_145120678_145121341_145121459_145123935_145124044_145125002_145125069_145128312
ENSMUST00000037099.9	chr4	-	4119	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	0	0	0	0	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCTTTTTTTTTTTTTT	NA	False	NA	0	True	AATAAA	-19	NA	135000125	134941279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ENSMUST00000037190.15	chr8	+	1191	8	FSM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_4	79.3373062516324	2368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTAGTGTTTCTTTCA	NA	False	NA	22	True	AATAAA	-35	NA	61343484	61360614	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ENSMUST00000037205.11	chr7	+	828	3	FSM	ENSMUSG00000033429.11	ENSMUST00000037205.11	828	3	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	55.5	1960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTTATTTGAATTT	NA	False	NA	25	True	ATTAAA	-26	NA	64042392	64061873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_64042592_64049916_64050255_64061582
ENSMUST00000037246.7	chr19	-	1067	8	FSM	ENSMUSG00000034108.7	ENSMUST00000037246.7	1067	8	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_5	30.737864703499	1929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889360	4875393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888858_4888932_4889224
ENSMUST00000037248.10	chr7	+	2766	7	FSM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	39.0498257216199	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACTCTCAGGCTCAGT	1476	False	NA	8	True	NA	NA	NA	126461143	126464549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
ENSMUST00000037260.8	chr15	+	2486	2	FSM	ENSMUSG00000050846.10	ENSMUST00000037260.8	2486	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTGTGTAATTGGCATA	NA	False	NA	10	True	AATAAA	-16	NA	75812800	75821249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_75813009_75818971
ENSMUST00000037290.12	chr10	-	2939	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	0	0	0	0	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	2531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTCCTGGTCTACCCT	NA	False	NA	-6	True	AATAAA	-27	NA	127147655	127132089	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ENSMUST00000037324.12	chr11	+	1440	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	0	0	0	0	multi-exon	FALSE	canonical	3	4483	junction_4	346.23483360286	19963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGTTTCTTAATGAA	411	False	NA	34	True	AATAAA	-41	NA	52122835	52137685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ENSMUST00000037333.17	chr17	+	1999	7	FSM	ENSMUSG00000034165.17	ENSMUST00000037333.17	1999	7	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_1	1813.81013951908	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTTGTGATCCCTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	47816052	47910616	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_47816192_47889633_47889699_47904578_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUST00000037337.10	chr5	+	2273	21	FSM	ENSMUSG00000039178.10	ENSMUST00000037337.10	2273	21	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	8.96994983263563	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGATATCTCTAATAATC	NA	False	NA	NA	False	ATTAAA	-22	NA	53966968	54061307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ENSMUST00000037349.8	chrX	-	2237	16	FSM	ENSMUSG00000036932.15	ENSMUST00000037349.8	2237	16	0	0	0	0	multi-exon	FALSE	canonical	3	1039	junction_9	82.1482129378898	2718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	-1	True	ATTAAA	-16	NA	47602440	47563820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ENSMUST00000037356.8	chr4	+	3260	4	FSM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	39.6316371938716	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTCACTTCCTTTG	NA	False	NA	10	True	AATAAA	-17	NA	143139556	143147661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_143139662_143143209_143143523_143143942_143144531_143145407
ENSMUST00000037361.9	chr1	+	1620	4	FSM	ENSMUSG00000038793.9	ENSMUST00000037361.9	1620	4	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	33.0790299468141	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTTGTTTCCTTATT	NA	False	NA	8	True	AATAAA	-17	NA	180762586	180765965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180762925_180764111_180764359_180764573_180764820_180765176
ENSMUST00000037372.8	chr13	-	3527	10	FSM	ENSMUSG00000032999.11	ENSMUST00000037372.8	3527	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_9	7.43531778858738	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGACTTCTAATCTCAAA	NA	False	NA	-7	True	ATTAAA	-24	NA	65353530	65324924	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433
ENSMUST00000037376.14	chr6	+	1405	10	FSM	ENSMUSG00000034744.14	ENSMUST00000037376.14	1405	10	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	21.8281729836116	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9258	False	NA	13	True	AATAAA	-21	NA	83771963	83779538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUST00000037383.13	chr12	+	2737	7	FSM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	76.8839312788367	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	18	True	AATAAA	-18	NA	8258106	8335759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_8258193_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ENSMUST00000037489.15	chr17	+	2190	7	FSM	ENSMUSG00000034254.18	ENSMUST00000037489.15	2190	7	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	5.07991688470939	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGATATCCATATCTT	NA	False	NA	44	True	AATAAA	-44	NA	34824834	34832423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34825146_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
ENSMUST00000037499.6	chr2	+	955	7	FSM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	38.970073988468	2266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGACTATCTCATATTTG	NA	False	NA	NA	False	TATAAA	-22	NA	105734982	105795903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794524_105794636_105795608
ENSMUST00000037534.8	chr11	+	1833	9	FSM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_5	18.8244355825082	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9190	False	NA	30	True	AATAAA	-31	NA	70538112	70542247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUST00000037565.14	chr4	-	2558	5	FSM	ENSMUSG00000066000.13	ENSMUST00000037565.14	2558	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	194.56666595283	2530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147726965	147696395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726820
ENSMUST00000037633.16	chr16	-	3825	23	FSM	ENSMUSG00000037965.16	ENSMUST00000037633.16	3825	23	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_12	24.8770530528646	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGTGTGGTCCTTTCT	NA	False	NA	1	True	AATAAA	-28	NA	10994257	10954455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ENSMUST00000037709.16	chr6	-	3241	12	FSM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_8	114.912830779186	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAATGTCCTCCTTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	146536095	146503849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ENSMUST00000037726.14	chr14	-	3416	18	FSM	ENSMUSG00000041594.19	ENSMUST00000037726.14	3416	18	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_13	13.8696352514015	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123220695	123156382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ENSMUST00000037728.13	chr7	+	3615	10	FSM	ENSMUSG00000034690.14	ENSMUST00000037728.13	3615	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	4.84067131350933	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGATGACTTCTAATTTC	2977	False	NA	21	True	AATAAA	-17	NA	6048159	6108149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_6048221_6063527_6063871_6068377_6069951_6075560_6075720_6076110_6076276_6087542_6087711_6095465_6095637_6101828_6102000_6103751_6103923_6107516
ENSMUST00000037739.8	chr14	-	1947	15	FSM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_10	82.9678140200482	3930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30741109	30734389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ENSMUST00000037783.7	chr6	+	1752	11	FSM	ENSMUSG00000034083.17	ENSMUST00000037783.7	1752	11	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	17.7876361554873	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAGGAACTTGTTTCTT	NA	False	NA	12	True	TATAAA	-16	NA	91855033	91876824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91870386_91870482_91872194_91872328_91875127_91875281_91876272
ENSMUST00000037796.14	chr1	+	1539	13	FSM	ENSMUSG00000033021.17	ENSMUST00000037796.14	1539	13	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	48.5514475124641	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCTTGGACTCCTACT	NA	False	NA	13	True	AATAAA	-17	NA	75412573	75419818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ENSMUST00000037807.3	chr6	+	1242	3	FSM	ENSMUSG00000034777.3	ENSMUST00000037807.3	1242	3	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	5	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTGTCCCTGTTCT	NA	False	NA	21	True	AATAAA	-32	NA	83688245	83715295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83688526_83710080_83710269_83714521
ENSMUST00000037820.3	chr4	-	1205	2	FSM	ENSMUSG00000038422.3	ENSMUST00000037820.3	1205	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTGTGTTCCTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	62420513	62417244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62418331_62420394
ENSMUST00000037839.12	chr3	-	1610	8	FSM	ENSMUSG00000039795.15	ENSMUST00000037839.12	1610	8	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	173.164190104923	1528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGCATTTGATCTATAA	NA	False	NA	-1	True	AATAAA	-45	NA	10416377	10405012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
ENSMUST00000037850.7	chr18	+	2067	15	FSM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	254.699312515598	2934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTAGGGATCTTTTTTT	NA	False	NA	38	True	AATAAA	-18	NA	53309387	53353937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ENSMUST00000037906.6	chr1	-	3341	2	FSM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCAGCCTTAAGTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	119840938	119835619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_119838885_119840862
ENSMUST00000037928.9	chrX	-	1783	4	FSM	ENSMUSG00000040749.12	ENSMUST00000037928.9	1783	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	206.108385726216	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCAGGTTTTTCTCACTT	NA	False	NA	-18	True	AATAAA	-15	NA	162859117	162853700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859010
ENSMUST00000037941.10	chr7	+	1533	8	FSM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	0	0	0	0	multi-exon	FALSE	canonical	3	5787	junction_4	310.433666383802	8156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCAGACCTCTTCCTGT	NA	False	NA	42	True	AATAAA	-30	NA	142606475	142621671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ENSMUST00000037960.11	chrX	-	2982	10	FSM	ENSMUSG00000036985.13	ENSMUST00000037960.11	2982	10	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	12.3107902084129	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCCTGCCTCCTCCTTCC	NA	False	NA	-2	True	ATTAAA	-16	NA	47297564	47260845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_47262519_47266916_47267014_47267385_47267490_47270123_47270227_47270975_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47297356
ENSMUST00000037967.6	chrX	-	2023	3	FSM	ENSMUSG00000032806.14	ENSMUST00000037967.6	2023	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	8.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCTCGGGTCCCTTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	73416955	73412822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_73414618_73416219_73416289_73416796
ENSMUST00000037983.6	chr3	+	3845	3	FSM	ENSMUSG00000038619.13	ENSMUST00000037983.6	3845	3	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_2	58	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACCAAAACTAGACCT	409	False	NA	10	True	AATAAA	-21	NA	95532330	95539413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95532488_95534059_95534186_95535851
ENSMUST00000038027.6	chr7	-	2884	18	FSM	ENSMUSG00000036427.6	ENSMUST00000038027.6	2884	18	0	0	0	0	multi-exon	FALSE	canonical	3	1600	junction_15	166.521152162862	11354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTAGGGTTTTATTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	33929761	33900754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ENSMUST00000038039.3	chr13	+	1957	7	FSM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	0	0	0	0	multi-exon	FALSE	canonical	3	768	junction_5	64.0791611125559	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGACTTTTTTCTTCATG	NA	False	NA	21	True	AATAAA	-21	NA	25015661	25026136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_25015913_25015992_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ENSMUST00000038069.9	chr7	+	1048	4	FSM	ENSMUSG00000054169.8	ENSMUST00000038069.9	1048	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	7.31816613336672	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCTCCTTCGACTCTA	1107	False	NA	NA	False	AATAAA	-25	NA	24476630	24484081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_24476765_24477550_24477911_24480294_24480655_24483887
ENSMUST00000038075.12	chr14	-	1076	3	FSM	ENSMUSG00000041625.16	ENSMUST00000038075.12	1076	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	3	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTTGGTCCTTCTTTTG	NA	False	NA	-2	True	ATTAAA	-29	NA	123150574	123128271	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_123129229_123137887_123137945_123150512
ENSMUST00000038091.8	chr1	+	3213	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_5	43.0761599444003	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGGAGTTTTTTGTT	NA	False	NA	22	True	AATAAA	-22	NA	180678691	180695678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
ENSMUST00000038096.8	chr11	+	2520	6	FSM	ENSMUSG00000039253.8	ENSMUST00000038096.8	2520	6	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_4	7.30479294709987	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTAAGACTGGTATATTT	3857	False	NA	NA	False	AATAAA	-20	NA	121312226	121322114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_121312430_121315751_121315904_121316380_121316473_121317446_121317530_121319870_121319994_121320247
ENSMUST00000038108.12	chr3	-	1249	4	FSM	ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	0	0	0	0	multi-exon	FALSE	canonical	3	5471	junction_1	421.328322755017	15721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGGGTGGAACCTTTA	NA	False	NA	NA	False	NA	NA	NA	51316409	51312097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
ENSMUST00000038131.10	chr5	-	1317	9	FSM	ENSMUSG00000033970.16	ENSMUST00000038131.10	1317	9	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	24.5098832106561	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAGTATTTTGCTTACA	NA	False	NA	60	True	TTTAAA	-40	NA	151574707	151566220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_151566569_151567175_151567246_151568077_151568177_151568254_151568392_151568982_151569165_151570903_151571002_151571709_151571778_151573336_151573475_151574530
ENSMUST00000038154.12	chr3	-	1232	4	FSM	ENSMUSG00000037161.15	ENSMUST00000038154.12	1232	4	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_2	9.84321537348893	363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTAGTCTTTCTTGTT	NA	False	NA	0	True	AATAAA	-17	NA	51303969	51295832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_51296745_51298646_51298741_51299245_51299350_51303847
ENSMUST00000038169.8	chr10	-	544	3	FSM	ENSMUSG00000033307.8	ENSMUST00000038169.8	544	3	0	0	0	0	multi-exon	FALSE	canonical	3	12818	junction_1	2119	67631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTGCCTCAGCTTCTGCT	NA	False	NA	-10	True	AATAAA	-18	NA	75696074	75695186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_75695378_75695520_75695694_75695894
ENSMUST00000038174.8	chr8	-	1356	9	FSM	ENSMUSG00000039720.8	ENSMUST00000038174.8	1356	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	19.421315609402	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTATGTTCTCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	27692575	27687486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399
ENSMUST00000038185.10	chr12	+	3310	9	FSM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_6	24.0724816959116	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	2663	False	NA	22	True	AATAAA	-19	NA	80509868	80544896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUST00000038194.5	chr15	-	5684	28	FSM	ENSMUSG00000022360.9	ENSMUST00000038194.5	5684	28	0	0	0	0	multi-exon	TRUE	canonical	3	283	junction_25	31.7407623492731	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTTTCTAGTTCTTGT	NA	False	NA	-11	True	AATAAA	-20	NA	57998478	57957441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ENSMUST00000038196.7	chr11	+	2499	18	FSM	ENSMUSG00000034121.13	ENSMUST00000038196.7	2499	18	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	22.9555008070187	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	6456	False	NA	18	True	TATAAA	-20	NA	87744040	87754629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
ENSMUST00000038217.14	chr10	-	1944	6	FSM	ENSMUSG00000040415.16	ENSMUST00000038217.14	1944	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	37.9705148766777	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	False	NA	0	True	AATAAA	-25	NA	127031578	127026246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_127026909_127027204_127027423_127028477_127029227_127029598_127029673_127030278_127030504_127031562
ENSMUST00000038234.13	chr6	+	4056	29	FSM	ENSMUSG00000030323.14	ENSMUST00000038234.13	4056	29	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_21	12.6374080266743	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCAGTGTCTGCGTTT	NA	False	NA	1	True	AATAAA	-13	NA	115830490	115903651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893930_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ENSMUST00000038237.8	chr11	+	2235	20	FSM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	27.0805712775824	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGTTTGTAGCTCCTT	NA	False	NA	21	True	ATTAAA	-18	NA	4845342	4878865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ENSMUST00000038244.15	chr17	+	1343	4	FSM	ENSMUSG00000034786.18	ENSMUST00000038244.15	1343	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.29983164553722	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGACTGGTATCTGGGG	NA	False	NA	5	True	AATAAA	-18	NA	34808779	34810728	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34809235_34809434_34809538_34809715_34809916_34810143
ENSMUST00000038341.8	chr2	-	3668	23	Antisense	novelGene_ENSMUSG00000040084.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1052	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCGCTCCTCCCAAAGC	7590	False	NA	NA	False	NA	NA	NA	118472072	118428691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr2_-_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ENSMUST00000038343.7	chr11	-	1722	11	FSM	ENSMUSG00000013418.9	ENSMUST00000038343.7	1722	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	6.67907179179862	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGAGCTAGGGTAGGAC	2890	False	NA	NA	False	NA	NA	NA	95805717	95756768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
ENSMUST00000038368.9	chr2	+	934	2	FSM	ENSMUSG00000042745.10	ENSMUST00000038368.9	934	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	471	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTGTGACTTCTTGGA	4422	False	NA	13	True	ATTAAA	-17	NA	152578170	152579330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_152578666_152578891
ENSMUST00000038379.5	chr19	+	3500	10	FSM	ENSMUSG00000034820.5	ENSMUST00000038379.5	3500	10	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	38.5749230894635	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTATACTGCATTGT	NA	False	NA	16	True	AATAAA	-16	NA	10502629	10525017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ENSMUST00000038388.7	chr10	+	5858	33	FSM	ENSMUSG00000034560.7	ENSMUST00000038388.7	5858	33	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_12	27.5850956133924	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAAACTGTCCTTCCAT	NA	False	NA	14	True	AATAAA	-17	NA	83379804	83432337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ENSMUST00000038406.7	chr6	+	1358	10	FSM	ENSMUSG00000029762.7	ENSMUST00000038406.7	1358	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1.94999208608714	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAAGTGATTTTTGAG	NA	False	NA	NA	False	AATAAA	-32	NA	34331053	34345398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_34331232_34333190_34333359_34334395_34334513_34335065_34335144_34340266_34340390_34340656_34340764_34341171_34341254_34342141_34342226_34342837_34342921_34345060
ENSMUST00000038411.5	chr10	+	1411	2	FSM	ENSMUSG00000113640.2	ENSMUST00000038411.5	1411	2	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCGTTTGCACTCAGGT	NA	False	NA	3	True	AATAAA	-15	NA	80438713	80443488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80438784_80442147
ENSMUST00000038431.8	chr11	-	2246	11	FSM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	6.12290780593665	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTGGCTTCCTTGC	6074	False	NA	-1	True	NA	NA	NA	94932180	94917083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_94918149_94918690_94918805_94919304_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661_94922847_94923290_94923363_94930174_94930317_94931964
ENSMUST00000038434.4	chr4	-	856	2	FSM	ENSMUSG00000036114.4	ENSMUST00000038434.4	856	2	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	0	1770	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCTGTTGTGTAAG	9620	False	NA	-17	True	AATAAA	-14	NA	41713534	41712032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41712815_41713460
ENSMUST00000038439.4	chr2	-	1008	11	FSM	ENSMUSG00000034278.4	ENSMUST00000038439.4	1008	11	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	69.3010822426317	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTACTTTTCTTCCTCTTG	NA	False	NA	-4	True	AATAAA	-15	NA	119039276	119002980	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014079_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
ENSMUST00000038474.14	chr2	+	1686	9	FSM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_6	46.6797600679352	79338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGAGTCTCACCGCGT	NA	False	NA	NA	False	AATAAA	-16	NA	31560726	31571361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
ENSMUST00000038514.15	chr5	-	2352	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_1	63.2088235288462	2206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGGTGTTTTATTT	NA	False	NA	0	True	AATAAA	-25	NA	92583078	92563398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
ENSMUST00000038521.14	chr7	+	1365	5	FSM	ENSMUSG00000035585.17	ENSMUST00000038521.14	1365	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	497.531908524468	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTTTGAGTCCTTAC	2175	False	NA	6	True	AATAAA	-16	NA	3696763	3704011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698362_3698621_3703526
ENSMUST00000038539.8	chr14	+	1843	2	FSM	ENSMUSG00000040822.8	ENSMUST00000038539.8	1843	2	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	0	1573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACTGGTGATTCACAT	NA	False	NA	NA	False	AATAAA	-26	NA	54923672	54928198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_54924578_54927260
ENSMUST00000038570.9	chr11	+	1926	10	FSM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	0	0	0	0	multi-exon	FALSE	canonical	3	1103	junction_6	68.3294488507475	4730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGTGGTGTTGTCTTCA	NA	False	NA	11	True	ATTAAA	-11	NA	4823950	4844200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ENSMUST00000038580.7	chr17	+	1438	8	FSM	ENSMUSG00000016206.7	ENSMUST00000038580.7	1438	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	3.09047252182628	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACCCCATGTGTTCAAT	NA	False	NA	NA	False	AATAAA	-13	NA	37581110	37585375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_37581226_37581412_37581683_37581888_37582165_37583159_37583436_37583538_37583644_37584609_37584643_37584756_37584804_37585059
ENSMUST00000038600.4	chr2	+	2080	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	2227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTCTAGAACTTTGAAC	NA	False	NA	28	True	NA	NA	NA	28358077	28361190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
ENSMUST00000038626.10	chr8	-	980	5	FSM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_3	27.2304976083802	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGCGTGTGGGTGGGTT	NA	False	NA	-2	True	ATTAAA	-17	NA	71213592	71211294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71211671_71211754_71211884_71212036_71212114_71213013_71213185_71213365
ENSMUST00000038644.5	chr11	-	820	5	FSM	ENSMUSG00000032892.15	ENSMUST00000038644.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_2	47.2989164780759	2802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCCTTCAAATCTA	7236	False	NA	-2	True	AATAAA	-22	NA	68864669	68863309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_68863568_68863768_68863855_68863942_68864100_68864266_68864384_68864467
ENSMUST00000038658.15	chr6	+	4119	4	FSM	ENSMUSG00000043131.15	ENSMUST00000038658.15	4119	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	135.189578822564	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATTTATTATCTACGT	NA	False	NA	97	True	ATTAAA	-20	NA	83303061	83320757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83303250_83306848_83307016_83315262_83315427_83317157
ENSMUST00000038675.7	chr7	+	692	5	FSM	ENSMUSG00000037772.14	ENSMUST00000038675.7	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	973	junction_1	229.96847610053	6687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGACACTTTGCCTT	NA	False	NA	2	True	AATAAA	-20	NA	142086748	142094484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_142086932_142088741_142088865_142089806_142089890_142091003_142091078_142094255
ENSMUST00000038677.5	chr19	-	4340	34	FSM	ENSMUSG00000035049.5	ENSMUST00000038677.5	4340	34	0	0	0	0	multi-exon	TRUE	canonical	3	269	junction_16	39.9184430265499	372	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGATGAGTGGCTTGGC	NA	False	NA	-8	True	AATAAA	-20	NA	41884612	41851289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ENSMUST00000038709.14	chr11	-	2417	7	FSM	ENSMUSG00000039294.15	ENSMUST00000038709.14	2417	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	26.4790273403101	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTTTCTGTTTTCTGC	NA	False	NA	0	True	AATAAA	-22	NA	121120135	121113413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121119864
ENSMUST00000038743.15	chr7	-	2310	15	FSM	ENSMUSG00000019734.17	ENSMUST00000038743.15	2310	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	9.74077271376478	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCGTTTTGAAACCCCG	5398	False	NA	-12	True	AATAAA	-16	NA	3680552	3668788	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_3669008_3669100_3669180_3669817_3669974_3670046_3670178_3670439_3670624_3672572_3672671_3672913_3673041_3673936_3674101_3674272_3674441_3674961_3675110_3677585_3677708_3677848_3678082_3678424_3678571_3679562_3679768_3680422
ENSMUST00000038772.13	chr10	-	1546	7	FSM	ENSMUSG00000034620.18	ENSMUST00000038772.13	1546	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	137.068920214937	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATTCATAAGTGTAA	NA	False	NA	-10	True	AATAAA	-19	NA	121933061	121917164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932252_121932367_121932804
ENSMUST00000038782.4	chr1	-	1546	12	FSM	ENSMUSG00000040629.9	ENSMUST00000038782.4	1546	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	4.55453638177285	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCACTCTTGCTTGTT	NA	False	NA	-7	True	ATTAAA	-22	NA	166066313	166028953	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_166029305_166029843_166029920_166032358_166032492_166033421_166033485_166053158_166053301_166053405_166053461_166054134_166054260_166061733_166061776_166062969_166063126_166064441_166064542_166065831_166065925_166066103
ENSMUST00000038791.15	chr7	-	1582	6	FSM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_5	40.804901666344	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTACTGATCTTCTGGT	NA	False	NA	3	True	AATAAA	-28	NA	118305001	118287767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118297777_118297954_118304612
ENSMUST00000038830.10	chr19	-	1614	4	FSM	ENSMUSG00000035171.10	ENSMUST00000038830.10	1614	4	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	6.94422221866655	1521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTCTTGTTGTTGT	453	False	NA	NA	False	AATAAA	-21	NA	21630340	21574675	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_21575699_21576118_21576233_21596472_21596580_21629970
ENSMUST00000038867.13	chr16	+	3230	30	FSM	ENSMUSG00000038084.17	ENSMUST00000038867.13	3230	30	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	99.4304230950511	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTACGTGTGTTCCAGG	NA	False	NA	6	True	AATAAA	-16	NA	29398197	29470694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ENSMUST00000038868.14	chr4	+	2466	13	FSM	ENSMUSG00000034401.17	ENSMUST00000038868.14	2466	13	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	15.2103309190388	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGTATTTTCATAGGT	NA	False	NA	20	True	AATAAA	-35	NA	111577180	111686339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
ENSMUST00000038945.6	chr1	+	1435	2	FSM	ENSMUSG00000041801.6	ENSMUST00000038945.6	1435	2	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTACTGAGTGAAATTC	6745	False	NA	22	True	AATGAA	-29	NA	135693856	135696874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_135694633_135696215
ENSMUST00000038973.7	chr17	-	1234	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_3	15.4275727189989	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGGTTATGTATTATA	NA	False	NA	85	True	ATTAAA	-32	NA	25459090	25453290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ENSMUST00000039048.2	chr19	+	1882	4	FSM	ENSMUSG00000035372.3	ENSMUST00000039048.2	1882	4	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	53.9897109539298	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGGGTCTGTGTG	NA	False	NA	11	True	ATTAAA	-23	NA	3758332	3767881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_3758437_3764403_3764626_3765637_3765803_3766490
ENSMUST00000039088.9	chr11	+	1745	3	FSM	ENSMUSG00000039329.9	ENSMUST00000039088.9	1745	3	0	0	0	0	multi-exon	FALSE	canonical	3	732	junction_1	1	2862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTATGTGTATGGTTT	NA	False	NA	26	True	AATAAA	-20	NA	121036968	121039145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_121037049_121037353_121037428_121037554
ENSMUST00000039132.9	chr17	+	2376	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGTTGGCTGGCATAG	NA	False	NA	NA	False	AATAAA	-37	NA	33184787	33198207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
ENSMUST00000039144.7	chr4	+	3319	19	FSM	ENSMUSG00000039953.14	ENSMUST00000039144.7	3319	19	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	165.993641109799	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGCAGTCAGTAACCATT	NA	False	NA	NA	False	NA	NA	NA	149671094	149732356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_149671230_149698506_149698630_149710543_149710574_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ENSMUST00000039156.7	chr2	-	937	3	FSM	ENSMUSG00000036504.7	ENSMUST00000039156.7	937	3	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_2	2.5	3837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGACTTGTGTCTTGC	5200	False	NA	-8	True	ATTAAA	-20	NA	25465236	25463441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_25463712_25464199_25464325_25464694
ENSMUST00000039161.10	chr9	+	918	8	FSM	ENSMUSG00000035443.11	ENSMUST00000039161.10	918	8	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_7	172.705955134082	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGAAGTGTTTTCTTCT	NA	False	NA	34	True	AATAAA	-15	NA	26911017	26918630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
ENSMUST00000039197.9	chr3	-	2620	15	FSM	ENSMUSG00000039865.9	ENSMUST00000039197.9	2620	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	3.70672307009404	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTTTGTTCATCTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	121326053	121253176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_121253726_121254750_121254988_121257062_121257201_121279910_121279998_121283846_121284004_121291367_121291534_121303022_121303210_121303840_121303966_121305970_121306061_121307305_121307467_121318475_121318570_121319315_121319453_121320712_121320856_121325315_121325421_121325809
ENSMUST00000039205.11	chr17	+	2314	7	FSM	ENSMUSG00000035473.11	ENSMUST00000039205.11	2314	7	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	8.09149072929224	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGACTCTTGTTCTTTTG	NA	False	NA	11	True	AATAAA	-19	NA	80434899	80492530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_80435335_80445441_80445597_80452408_80452616_80457517_80457600_80488989_80489132_80490620_80490796_80491412
ENSMUST00000039213.15	chr9	-	5650	29	FSM	ENSMUSG00000035941.16	ENSMUST00000039213.15	5650	29	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_19	26.8952047922362	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTAGCGTGTGTTTG	NA	False	NA	-7	True	AATAAA	-16	NA	85631387	85569412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ENSMUST00000039234.10	chr4	+	2546	9	FSM	ENSMUSG00000040410.15	ENSMUST00000039234.10	2546	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	14.7627063914446	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTAAGAATCTTT	NA	False	NA	NA	False	AATAAA	-44	NA	22357542	22434091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
ENSMUST00000039286.5	chr10	+	2352	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_3	36.7828709025918	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATGTGGTGGCTCA	NA	False	NA	NA	False	AATAAA	-18	NA	44144353	44240287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ENSMUST00000039388.3	chr11	+	1382	2	FSM	ENSMUSG00000034936.3	ENSMUST00000039388.3	1382	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTGATCTGGTAACT	2550	False	NA	NA	False	ATTAAA	-18	NA	101556366	101558658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101556464_101557373
ENSMUST00000039442.12	chr3	+	2037	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	14.5143607047182	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCAGGTATTTTAAGCA	NA	False	NA	NA	False	NA	NA	NA	121085421	121156743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
ENSMUST00000039487.10	chr17	+	2245	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	0	0	0	0	multi-exon	FALSE	canonical	3	932	junction_1	74.5	3967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGGAGAGAGCAAGTG	1690	False	NA	NA	False	ATTAAA	-24	NA	6130060	6136792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_6130187_6131076_6131150_6134746
ENSMUST00000039506.15	chr1	+	2278	7	FSM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_3	44.2329691017408	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTTGTGTCTTCTCTT	3743	False	NA	19	True	AATAAA	-19	NA	172139933	172147408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ENSMUST00000039537.14	chr3	+	2800	10	FSM	ENSMUSG00000038712.17	ENSMUST00000039537.14	2800	10	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_8	52.7870167352017	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTCCTACCTTGGAG	NA	False	NA	15	True	AATAAA	-16	NA	95190254	95203477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202610_95202737_95202961
ENSMUST00000039541.12	chr2	+	4206	18	FSM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_12	42.7635326321784	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001695	121029251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ENSMUST00000039545.5	chrX	+	4407	8	FSM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	60.7816433083649	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTTGAGATTTTCA	NA	False	NA	19	True	NA	NA	NA	152142608	152178793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_152142706_152142837_152142961_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ENSMUST00000039554.7	chr2	-	2828	11	FSM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_5	30.9683709613535	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTAATGATACAATGCT	NA	False	NA	-12	True	AATAAA	-23	NA	132657974	132646126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ENSMUST00000039562.8	chr14	+	1550	3	FSM	ENSMUSG00000035235.14	ENSMUST00000039562.8	1550	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	49	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGAGTTTGTGCTGTG	NA	False	NA	18	True	AATAAA	-16	NA	61836988	61843395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_61837020_61837242_61837345_61841978
ENSMUST00000039577.8	chr17	+	2574	5	FSM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	22.3271135617661	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTCTCTCTCTCTGT	NA	False	NA	2	True	AATAAA	-18	NA	21670635	21685849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_21670684_21672698_21672790_21676558_21676651_21681922_21682050_21683633
ENSMUST00000039581.14	chr11	+	2304	9	FSM	ENSMUSG00000034947.14	ENSMUST00000039581.14	2304	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4.99843725578305	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGGGGCATTCCTGGA	3688	False	NA	NA	False	AATAAA	-17	NA	101473067	101482614	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101473152_101473450_101473531_101474383_101474611_101475271_101475336_101477064_101477219_101479678_101479820_101479923_101479968_101480760_101480815_101481158
ENSMUST00000039601.10	chr11	+	821	5	FSM	ENSMUSG00000040767.11	ENSMUST00000039601.10	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_3	16.768646337734	2429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAGAAAGCCATAGT	NA	False	NA	21	True	AATAAA	-22	NA	32155414	32158984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_32155664_32156959_32157051_32157556_32157663_32158333_32158409_32158684
ENSMUST00000039608.9	chr18	+	2456	17	FSM	ENSMUSG00000035765.11	ENSMUST00000039608.9	2456	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_13	17.5886149255705	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75151855	75420035	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ENSMUST00000039610.10	chr9	+	3383	19	FSM	ENSMUSG00000035769.10	ENSMUST00000039610.10	3383	19	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	12.9909750249458	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACCTAAAATCCACCT	NA	False	NA	11	True	AATAAA	-11	NA	119186446	119222386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ENSMUST00000039620.7	chr16	+	1170	3	FSM	ENSMUSG00000022947.9	ENSMUST00000039620.7	1170	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	11	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATTTGGTTTTTGTTTGT	NA	False	NA	20	True	ATTAAA	-22	NA	93480102	93487878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_93480502_93481934_93482043_93487215
ENSMUST00000039665.8	chr15	+	2255	14	FSM	ENSMUSG00000032783.10	ENSMUST00000039665.8	2255	14	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	8.88852727732572	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGGGGCAGCCAGTG	NA	False	NA	8	True	AATAAA	-17	NA	98972858	98981284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
ENSMUST00000039674.13	chr9	-	3632	13	FSM	ENSMUSG00000035934.17	ENSMUST00000039674.13	3632	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	4.65698400254929	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATGCACAGTTCTCTC	NA	False	NA	-5	True	AGTAAA	-19	NA	37058703	36802277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36994502_36994573_37058536
ENSMUST00000039694.13	chr13	-	1327	9	FSM	ENSMUSG00000003062.14	ENSMUST00000039694.13	1327	9	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_8	60.3857392105123	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	False	NA	0	True	AATAAA	-19	NA	19579965	19541845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ENSMUST00000039758.6	chr19	-	550	2	FSM	ENSMUSG00000035885.6	ENSMUST00000039758.6	550	2	0	0	0	0	multi-exon	FALSE	canonical	3	12296	junction_1	0	50833	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCATGTCCTTCTGCAC	7366	False	NA	NA	False	AATAAA	-26	NA	7194981	7192517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_7192850_7194763
ENSMUST00000039763.14	chr10	-	1557	8	FSM	ENSMUSG00000040006.14	ENSMUST00000039763.14	1557	8	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_3	111.32321026119	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTATTTTTAATTTTT	7463	False	NA	-1	True	AATAAA	-17	NA	7656681	7643710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_7644350_7646120_7646285_7649061_7649193_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
ENSMUST00000039784.12	chr9	+	1762	12	FSM	ENSMUSG00000036138.17	ENSMUST00000039784.12	1762	12	0	0	0	0	multi-exon	TRUE	canonical	3	245	junction_2	23.8777880116768	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGTCATTTCCTTCA	7728	False	NA	28	True	AGTAAA	-19	NA	119170359	119179365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119173531_119173575_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ENSMUST00000039798.16	chr9	+	3382	22	FSM	ENSMUSG00000035919.17	ENSMUST00000039798.16	3382	22	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	13.43515542748	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	3	True	AATAAA	-20	NA	22387010	22799576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_22387352_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ENSMUST00000039803.7	chr14	+	2139	9	FSM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_2	40.200862863874	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCAGTAGTTTTTATA	8886	False	NA	16	True	AATAAA	-16	NA	122116031	122258446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ENSMUST00000039810.8	chr10	-	5992	25	FSM	ENSMUSG00000034667.9	ENSMUST00000039810.8	5992	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	297.787649802674	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462221	121423284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449566_121450895_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ENSMUST00000039818.10	chr4	+	3382	15	FSM	ENSMUSG00000028737.16	ENSMUST00000039818.10	3382	15	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_3	22.7807876447301	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGATCGTGTGTGTC	NA	False	NA	26	True	NA	NA	NA	139350176	139377001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
ENSMUST00000039846.12	chr17	-	865	4	FSM	ENSMUSG00000064308.11	ENSMUST00000039846.12	865	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	4.49691252107735	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAAAATTTTGTGTGTTT	NA	False	NA	-20	True	ATTAAA	-29	NA	37292129	37288592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_37288999_37289360_37289439_37289542_37289826_37292031
ENSMUST00000039881.4	chr7	+	3610	20	FSM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	22.1664566531058	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCGTTTGTTTAATTAAT	NA	False	NA	38	True	AATAAA	-43	NA	82297848	82427060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ENSMUST00000039894.13	chr13	-	1844	17	FSM	ENSMUSG00000039233.13	ENSMUST00000039894.13	1844	17	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	17.0705109399221	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTTCTCTGCCCTTTC	NA	False	NA	-5	True	AATAAA	-14	NA	14214223	14172536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
ENSMUST00000039913.9	chr6	-	3651	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	0	0	0	0	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	2756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGGTCTGTTCAGTGT	NA	False	NA	NA	False	AATAAA	-22	NA	127086513	127062078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ENSMUST00000039949.5	chr11	-	2444	9	FSM	ENSMUSG00000039055.5	ENSMUST00000039949.5	2444	9	0	0	0	0	multi-exon	TRUE	canonical	3	178	junction_8	32.4422563950167	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	4403	False	NA	-5	True	AATAAA	-18	NA	94544790	94535821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541850_94544521
ENSMUST00000040005.13	chr2	-	1228	10	FSM	ENSMUSG00000040174.15	ENSMUST00000040005.13	1228	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	32.7210431781547	505	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATGATTTGATCCAAAA	8875	False	NA	-7	True	ATTAAA	-20	NA	93841075	93810981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
ENSMUST00000040010.10	chrX	-	2792	7	FSM	ENSMUSG00000031167.17	ENSMUST00000040010.10	2792	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	443.550604653955	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGTGTGTTACACGTA	6561	False	NA	-3	True	ATTAAA	-16	NA	8011936	8005216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8007448_8009489_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUST00000040117.15	chr13	+	3328	17	FSM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_13	19.2596363867546	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5494	False	NA	8	True	AATAAA	-20	NA	51805732	51838080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ENSMUST00000040135.9	chr10	+	1286	8	FSM	ENSMUSG00000040034.16	ENSMUST00000040135.9	1286	8	0	0	0	0	multi-exon	FALSE	canonical	3	1090	junction_2	84.4680835751418	4600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAATGTTGGCTTGCTGCT	NA	False	NA	20	True	AATAAA	-20	NA	7543266	7554645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
ENSMUST00000040148.11	chr3	-	2599	19	FSM	ENSMUSG00000037325.11	ENSMUST00000040148.11	2599	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	9.57507695872112	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTCTTTATATATT	NA	False	NA	NA	False	ATTAAA	-21	NA	36667538	36627290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_36627772_36629442_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648710_36652414_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328_36664501_36664710_36664778_36666160_36666227_36667398
ENSMUST00000040151.9	chr17	-	935	4	FSM	ENSMUSG00000036185.10	ENSMUST00000040151.9	935	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	16.4181471413663	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	AATAAA	-17	NA	35246992	35244952	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35245434_35245669_35245763_35246419_35246561_35246772
ENSMUST00000040154.9	chr5	-	571	3	FSM	ENSMUSG00000041697.10	ENSMUST00000040154.10	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	7177	junction_2	62.5	24350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGACGGTACGATTTTAT	4854	False	NA	-26	True	AATAAA	-26	NA	115487040	115483700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_115483986_115486623_115486767_115486897
ENSMUST00000040167.11	chr11	-	1949	7	FSM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_6	119.767367100652	1653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGCTTTATTTTGTA	NA	False	NA	-12	True	AATAAA	-18	NA	40583601	40570140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
ENSMUST00000040177.7	chr17	+	976	3	FSM	ENSMUSG00000036214.15	ENSMUST00000040177.7	976	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	121.5	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTTTGCTAATGGTACC	NA	False	NA	17	True	AATAAA	-17	NA	37269483	37276514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_37269595_37275248_37275325_37275725
ENSMUST00000040188.16	chr18	-	2630	7	FSM	ENSMUSG00000036223.17	ENSMUST00000040188.16	2630	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	177.375699826354	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGGCATGGTGGCTTCC	6765	False	NA	-8	True	NA	NA	NA	74340850	74328369	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340600
ENSMUST00000040213.13	chr5	+	3044	16	FSM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_10	31.6406208676266	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGACATGTTCCCATGCTT	4928	False	NA	NA	False	AATAAA	-17	NA	130285875	130370404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ENSMUST00000040241.15	chr8	-	6612	12	FSM	ENSMUSG00000033658.17	ENSMUST00000040241.15	6612	12	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_11	90.8713558047041	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGGGTATTTTGTCTGC	NA	False	NA	-5	True	AATAAA	-17	NA	111754396	111729819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
ENSMUST00000040248.9	chr16	-	3282	20	FSM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_3	29.6569490345649	493	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	1947	False	NA	0	True	AATAAA	-18	NA	15964715	15707087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ENSMUST00000040254.16	chr8	+	4780	29	FSM	ENSMUSG00000036270.17	ENSMUST00000040254.16	4780	29	0	0	0	0	multi-exon	TRUE	canonical	3	268	junction_16	54.5128121057194	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTGATGTGACTA	3256	False	NA	31	True	AATAAA	-23	NA	106607512	106619857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ENSMUST00000040284.6	chr18	+	979	3	FSM	ENSMUSG00000036299.6	ENSMUST00000040284.6	979	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	315	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCTGCTTTTTGTCTTT	NA	False	NA	26	True	ATTAAA	-17	NA	75138938	75143004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_75139086_75141721_75141898_75142348
ENSMUST00000040312.7	chr2	-	2026	4	FSM	ENSMUSG00000032715.10	ENSMUST00000040312.7	2026	4	0	0	0	0	multi-exon	FALSE	canonical	3	926	junction_3	7.71722460186015	2034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	False	NA	-4	True	AATAAA	-29	NA	152185952	152179341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_152180608_152181634_152181928_152184956_152185248_152185776
ENSMUST00000040313.6	chr15	-	1276	2	FSM	ENSMUSG00000037525.6	ENSMUST00000040313.6	1276	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTCGTTTCTTTGCT	NA	False	NA	0	True	ATTAAA	-19	NA	99372611	99367959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_99368961_99372336
ENSMUST00000040361.8	chr6	+	1789	4	FSM	ENSMUSG00000039347.8	ENSMUST00000040361.8	1789	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	1.24721912892465	422	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCCTCTGCTCAGTT	6204	False	NA	27	True	AATAAA	-35	NA	48514548	48518735	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_48514789_48516157_48516206_48516973_48517101_48517361
ENSMUST00000040381.15	chr2	-	3179	8	FSM	ENSMUSG00000039804.16	ENSMUST00000040381.15	3179	8	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_1	19.1790702249582	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAATCTTTCTTGG	2982	False	NA	-6	True	ATTAAA	-15	NA	164876787	164842276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
ENSMUST00000040383.9	chr8	-	3471	29	FSM	ENSMUSG00000036686.17	ENSMUST00000040383.9	3471	29	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_17	12.7601500215095	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTCTTTTTGTCCTTG	NA	False	NA	-1	True	AATGAA	-24	NA	84874565	84859456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ENSMUST00000040402.14	chr17	-	1599	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	0	0	0	0	multi-exon	FALSE	canonical	3	708	junction_2	5	3126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGTGTTAAATACAGGC	NA	False	NA	NA	False	AATAAA	-15	NA	37262605	37259247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_37260447_37260768_37260878_37262314
ENSMUST00000040416.8	chr8	-	2547	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTTTGTGTACACTT	7686	False	NA	-28	True	ATTAAA	-10	NA	111724432	111701627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ENSMUST00000040421.11	chr5	+	2037	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGATGTCACTTTTTG	NA	False	NA	21	True	AATAAA	-19	NA	115417724	115435031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
ENSMUST00000040423.12	chr2	+	1691	4	FSM	ENSMUSG00000032679.13	ENSMUST00000040423.12	1691	4	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	38.5082963644055	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTATCTTGACTCTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	103926145	103945699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319
ENSMUST00000040428.4	chr11	-	611	3	FSM	ENSMUSG00000093989.2	ENSMUST00000040428.4	611	3	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_2	4	4243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTGTCTGTGCTTTCA	NA	False	NA	-1	True	AATAAA	-20	NA	70130668	70128949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70129297_70129763_70129841_70130481
ENSMUST00000040430.8	chr11	-	2766	6	FSM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	0	0	0	0	multi-exon	TRUE	canonical	3	320	junction_5	13.7462722219517	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGACCAGATGTTGTAT	NA	False	NA	-11	True	AATAAA	-15	NA	101357056	101349570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734_101353943_101356533
ENSMUST00000040440.7	chr17	-	1205	6	FSM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	0	0	0	0	multi-exon	FALSE	canonical	3	6557	junction_1	335.908082665482	13142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754363	87740839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ENSMUST00000040454.5	chr10	+	2744	2	FSM	ENSMUSG00000035759.5	ENSMUST00000040454.5	2744	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCATGTAAGTTAATTGT	NA	False	NA	NA	False	AATAAA	-20	NA	111134539	111137588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_111134769_111135073
ENSMUST00000040461.4	chr12	+	3435	10	FSM	ENSMUSG00000034258.5	ENSMUST00000040461.4	3435	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	3.8522079607466	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTCATCATTTAGTG	NA	False	NA	NA	False	AATAAA	-14	NA	85793312	85860359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_85794364_85829730_85829873_85832861_85833003_85842948_85843017_85845271_85845376_85849908_85850020_85851141_85851248_85851369_85851482_85851969_85852026_85858815
ENSMUST00000040518.6	chr15	+	1942	13	FSM	ENSMUSG00000033047.6	ENSMUST00000040518.6	1942	13	0	0	0	0	multi-exon	FALSE	canonical	3	1651	junction_4	129.272537257102	6640	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTCTCATTATTAT	NA	False	NA	30	True	AGTAAA	-20	NA	78959378	78978605	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ENSMUST00000040519.12	chr12	+	1065	5	FSM	ENSMUSG00000037787.15	ENSMUST00000040519.12	1065	5	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_3	10.0343161201947	3093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGCAAGTTGAGAATAA	1541	False	NA	NA	False	TTTAAA	-1	NA	111679694	111700654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111700100
ENSMUST00000040536.6	chr12	+	955	3	FSM	ENSMUSG00000034266.7	ENSMUST00000040536.6	955	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGAAAGCGGCTTCCC	NA	False	NA	NA	False	AATAAA	-18	NA	85733442	85755861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_85733748_85736041_85736147_85755316
ENSMUST00000040538.10	chr1	+	1948	12	FSM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_9	16.3434218576322	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCCCCTTTTTTGGT	NA	False	NA	12	True	AATAAA	-19	NA	179495774	179514754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
ENSMUST00000040560.11	chr10	-	1206	6	FSM	ENSMUSG00000040521.12	ENSMUST00000040560.11	1206	6	0	0	0	0	multi-exon	FALSE	canonical	3	855	junction_5	79.6728310027954	2974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGTGTGAGTGTGTGT	NA	False	NA	-3	True	AATAAA	-24	NA	126866709	126858200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126866612
ENSMUST00000040577.5	chr11	+	1510	4	FSM	ENSMUSG00000038046.5	ENSMUST00000040577.5	1510	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	6.53197264742181	353	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATATGAGTGTTTGCAGG	550	False	NA	23	True	ATTAAA	-31	NA	76134540	76141445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_76134913_76135104_76135350_76138172_76138341_76140720
ENSMUST00000040607.6	chr6	+	743	4	FSM	ENSMUSG00000034192.6	ENSMUST00000040607.6	743	4	0	0	0	0	multi-exon	FALSE	canonical	3	1484	junction_1	387.955610290089	8092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTAATGTGTCT	NA	False	NA	47	True	ATTAAA	-23	NA	91492909	91499607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222
ENSMUST00000040655.14	chr17	-	1128	5	FSM	ENSMUSG00000036594.16	ENSMUST00000040655.14	1128	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.5	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGGTTTTTCTTGT	NA	False	NA	NA	False	AATAAA	-28	NA	34506797	34501717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34501998_34502128_34502304_34502548_34502831_34503261_34503511_34506655
ENSMUST00000040656.8	chr13	+	1253	7	FSM	ENSMUSG00000038286.12	ENSMUST00000040656.8	1253	7	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	28.0356915377524	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTCCTGTTTGCTA	NA	False	NA	15	True	AATAAA	-17	NA	34221579	34258057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34244416_34244549_34247892_34248017_34257658
ENSMUST00000040717.7	chr9	+	4858	35	FSM	ENSMUSG00000036768.7	ENSMUST00000040717.7	4858	35	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_12	27.7337969778696	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780110	122847798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ENSMUST00000040735.12	chr17	-	1496	11	FSM	ENSMUSG00000036820.13	ENSMUST00000040735.12	1496	11	0	0	0	0	multi-exon	TRUE	canonical	3	306	junction_8	20.5156038175824	606	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382740	24374806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
ENSMUST00000040746.8	chr17	-	720	4	FSM	ENSMUSG00000079707.11	ENSMUST00000040746.8	720	4	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_1	6.37704215656966	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGCCTCGTGTTACC	NA	False	NA	NA	False	AATAAA	-14	NA	15261750	15247415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_15247580_15250770_15250927_15253608_15253816_15261557
ENSMUST00000040766.9	chr12	-	1482	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	0	0	0	0	multi-exon	FALSE	canonical	3	1293	junction_2	34.3110769285955	3927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTCCTTGTGTATGTGT	8464	False	NA	-5	True	ATTAAA	-20	NA	85421621	85389561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
ENSMUST00000040776.6	chr8	-	1814	13	FSM	ENSMUSG00000036672.6	ENSMUST00000040776.6	1814	13	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	25.0593739391514	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAAGTTAGCGATATT	NA	False	NA	NA	False	ATTAAA	-12	NA	106578686	106571308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
ENSMUST00000040783.11	chr1	-	5049	28	FSM	ENSMUSG00000005501.15	ENSMUST00000040783.11	5049	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	11.7095625279229	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGTCATATACTGCCT	NA	False	NA	-9	True	AATAAA	-24	NA	87936273	87872842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ENSMUST00000040806.5	chr11	+	581	2	FSM	ENSMUSG00000038057.5	ENSMUST00000040806.5	581	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTGGAGTCTGTGGCA	NA	False	NA	NA	False	AATAAA	-15	NA	76108433	76109492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_76108575_76109052
ENSMUST00000040824.2	chr3	+	404	2	FSM	ENSMUSG00000042737.10	ENSMUST00000040824.2	404	2	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_1	0	4140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTGTAGTTTTGAGT	6777	False	NA	17	True	ATTAAA	-18	NA	89173858	89174384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89173914_89174035
ENSMUST00000040828.7	chr17	+	1212	6	FSM	ENSMUSG00000073421.7	ENSMUST00000040828.7	1212	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	17.3735431043872	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTGATAATTGCTG	NA	False	NA	12	True	NA	NA	NA	34482182	34488393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34482380_34483734_34484008_34486309_34486592_34486896_34487008_34487434_34487459_34488068
ENSMUST00000040844.16	chr7	+	4284	29	FSM	ENSMUSG00000034867.17	ENSMUST00000040844.16	4284	29	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_17	26.9819242214835	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGTGCCATTTTTGTG	NA	False	NA	23	True	AGTAAA	-15	NA	35285668	35338651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ENSMUST00000040860.3	chr18	+	1692	7	FSM	ENSMUSG00000036743.5	ENSMUST00000040860.3	1692	7	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_2	7.18795288428261	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGAGTGTCTCCTTCAA	NA	False	NA	10	True	NA	NA	NA	14839207	14895355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14890338_14890459_14890678_14890742_14894403
ENSMUST00000040872.13	chr2	+	3458	20	FSM	ENSMUSG00000027412.13	ENSMUST00000040872.13	3458	20	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_3	8.54837950981163	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGAGAACCACGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	160730027	160747922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_160730138_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743577_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ENSMUST00000040873.12	chr5	-	3024	20	FSM	ENSMUSG00000037364.13	ENSMUST00000040873.12	3024	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	186.551382419291	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTATGTCCCTTCCCAA	8257	False	NA	-1	True	AGTAAA	-29	NA	137305936	137293965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ENSMUST00000040881.14	chr16	+	1779	12	FSM	ENSMUSG00000014232.15	ENSMUST00000040881.14	1779	12	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	16.217019933921	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGCTGCTATTATTAT	3094	False	NA	7	True	AATACA	-17	NA	3726688	3759011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
ENSMUST00000040907.8	chr17	-	2224	9	FSM	ENSMUSG00000036775.14	ENSMUST00000040907.8	2224	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	27.3849867628232	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTGCTTGTGTTTCCT	NA	False	NA	-4	True	NA	NA	NA	26309311	26300184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
ENSMUST00000040912.9	chr9	-	4605	24	FSM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_4	55.8021416884086	740	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7183	False	NA	-3	True	AATAAA	-20	NA	22300484	22243307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ENSMUST00000040917.14	chr9	+	499	4	FSM	ENSMUSG00000036781.14	ENSMUST00000040917.14	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	10808	junction_3	618.277355956765	56944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTCCTCCCTCTGCTT	NA	False	NA	30	True	AATAAA	-14	NA	66853367	66856794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66856610
ENSMUST00000040924.9	chr18	-	3098	11	FSM	ENSMUSG00000037013.18	ENSMUST00000040924.9	3098	11	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	289.216597034126	1521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTTCTTTAAATTAG	NA	False	NA	-13	True	AATAAA	-23	NA	14815971	14758679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ENSMUST00000040971.14	chr7	-	4498	13	FSM	ENSMUSG00000035547.15	ENSMUST00000040971.14	4498	13	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_9	14.761765552339	349	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGTTTCATTTTTCC	NA	False	NA	1	True	AATAAA	-23	NA	97827481	97770765	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ENSMUST00000040972.4	chr13	-	4120	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTCCCTTGATCATGA	NA	False	NA	-53	True	AATGAA	-15	NA	98399549	98383352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ENSMUST00000041003.8	chr17	-	1402	7	FSM	ENSMUSG00000036983.8	ENSMUST00000041003.8	1402	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	6.8414585839246	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAACCTAACAGCTCAAA	NA	False	NA	NA	False	AATAAA	-16	NA	3608056	3569530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
ENSMUST00000041005.6	chr9	+	632	6	FSM	ENSMUSG00000059412.8	ENSMUST00000041005.6	632	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	6.73498329619309	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGAGTGCTTATCATTC	NA	False	NA	34	True	AATGAA	-20	NA	45314435	45321576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_45314599_45319403_45319443_45319597_45319673_45320810_45320848_45321000_45321032_45321289
ENSMUST00000041008.10	chr12	+	2613	12	FSM	ENSMUSG00000033373.17	ENSMUST00000041008.10	2613	12	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_4	27.7548298231568	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	76884187	76968186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_76884426_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ENSMUST00000041023.14	chr1	-	6247	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	0	0	0	0	multi-exon	TRUE	canonical	3	518	junction_15	35.6964730086209	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTCAGTTTCAGT	NA	False	NA	-4	True	AATAAA	-21	NA	135358237	135310049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ENSMUST00000041042.13	chr11	+	1957	9	FSM	ENSMUSG00000034412.14	ENSMUST00000041042.13	1957	9	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_8	26.2963875846094	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTGTATAGTTAGGAC	1549	False	NA	24	True	AATAAA	-15	NA	4136788	4165505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
ENSMUST00000041045.14	chr3	+	1069	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	0	0	0	0	multi-exon	FALSE	canonical	3	13832	junction_1	739.113320134335	92691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGTACTTTTGTTGT	NA	False	NA	32	True	ATTAAA	-21	NA	137570247	137572683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
ENSMUST00000041053.11	chr18	+	1516	10	FSM	ENSMUSG00000036880.11	ENSMUST00000041053.11	1516	10	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_8	17.7325814376939	820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	False	NA	13	True	AATAAA	-17	NA	74912267	74939279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
ENSMUST00000041100.4	chr5	+	1773	3	FSM	ENSMUSG00000039754.11	ENSMUST00000041100.4	1773	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	0.5	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATTTCTCCTTTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	136165007	136170466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_136165149_136168191_136168390_136169032
ENSMUST00000041122.11	chr4	+	672	5	FSM	ENSMUSG00000042198.13	ENSMUST00000041122.11	672	5	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	68.1762421962372	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGGGGTTTTTTTTTG	-5	True	NA	30	True	ATTAAA	-23	NA	3938913	3943528	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_3939132_3939378_3939527_3941245_3941312_3942720_3942820_3943387
ENSMUST00000041160.13	chr4	+	1192	3	FSM	ENSMUSG00000038607.13	ENSMUST00000041160.13	1192	3	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	16.5	1631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTGTGTTTGGTGTCT	1876	False	NA	35	True	AATAAA	-35	NA	59035087	59041903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_59035319_59039226_59039359_59041074
ENSMUST00000041164.4	chr15	+	742	5	FSM	ENSMUSG00000033099.11	ENSMUST00000041164.4	742	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	186.959053003592	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTGTGCTTGTGCT	NA	False	NA	10	True	NA	NA	NA	78819194	78825064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_78819276_78820678_78820785_78821333_78821383_78824265_78824367_78824659
ENSMUST00000041190.17	chr15	-	1916	15	FSM	ENSMUSG00000037570.17	ENSMUST00000041190.17	1916	15	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_2	85.1129201923742	1626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTTTATTTTTTTTTA	NA	False	NA	1	True	AATAAA	-21	NA	99149842	99140697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
ENSMUST00000041208.9	chr15	-	1811	16	FSM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_7	35.3844912669692	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGATGTAACTCCGAGTG	NA	False	NA	-5	True	AATAAA	-25	NA	102259194	102246686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
ENSMUST00000041213.12	chr1	-	2429	10	FSM	ENSMUSG00000033159.15	ENSMUST00000041213.12	2429	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	47.8820567438857	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTGGCCTTTTCCTTC	9308	False	NA	-16	True	AATAAA	-14	NA	75119341	75112414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75118701_75119205_75119286
ENSMUST00000041262.14	chr12	+	676	4	FSM	ENSMUSG00000090258.8	ENSMUST00000041262.14	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_2	1.88561808316413	2329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTATGTTTTCTTTT	NA	False	NA	9	True	AATGAA	-3	NA	76812311	76829954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586
ENSMUST00000041264.15	chr10	-	2035	4	FSM	ENSMUSG00000062931.16	ENSMUST00000041264.15	2035	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	52.6898683071254	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTATGTTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	82077107	82060683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_82062428_82063364_82063426_82063632_82063760_82077004
ENSMUST00000041314.17	chr18	+	1475	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	0	0	0	0	multi-exon	FALSE	canonical	3	2803	junction_2	114.719948860983	5166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCTTGTGTTATTGG	4640	False	NA	22	True	AATAAA	-16	NA	35731669	35750239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
ENSMUST00000041316.15	chr12	-	1398	4	FSM	ENSMUSG00000041359.15	ENSMUST00000041316.15	1398	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	814.330945555238	4130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCTCTTGGAATTATG	NA	False	NA	-2	True	AATAAA	-23	NA	105188996	105183008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_105183961_105184481_105184552_105184917_105185089_105188791
ENSMUST00000041331.4	chr19	-	4832	6	FSM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_3	163.124001912655	1974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	-4	True	NA	-5	True	AATAAA	-22	NA	44396148	44382893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
ENSMUST00000041362.12	chr2	+	2867	7	FSM	ENSMUSG00000037523.14	ENSMUST00000041362.12	2867	7	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_4	7.24377127070024	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	7264	False	NA	14	True	ATTAAA	-19	NA	131075986	131089945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_131076048_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ENSMUST00000041364.13	chr5	-	2702	18	FSM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_10	61.2066102226557	1448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCTGTGTGGTGTGTT	NA	False	NA	-5	True	AATAAA	-16	NA	34817492	34795879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ENSMUST00000041366.14	chr5	+	646	4	FSM	ENSMUSG00000039771.14	ENSMUST00000041366.14	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	1103	junction_2	77.5471182930453	5633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCAGTGTGTGGACTG	9212	False	NA	30	True	AATAAA	-19	NA	136145484	136151801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_136145660_136148848_136148939_136150942_136151118_136151595
ENSMUST00000041370.11	chrX	-	3862	10	FSM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	53.4535681747934	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTCTGTGTATTATT	NA	False	NA	NA	False	AGTAAA	-17	NA	161612450	161561914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ENSMUST00000041382.7	chr8	-	3838	24	FSM	ENSMUSG00000033703.10	ENSMUST00000041382.7	3838	24	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_23	12.3354193641104	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAGAAAACTGTTTTTT	1243	False	NA	-7	True	AATAAA	-19	NA	111629091	111609094	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ENSMUST00000041438.7	chr10	+	2600	10	FSM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	20.085619202938	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTTATTAATTTCAT	NA	False	NA	8	True	AATAAA	-15	NA	41763434	41784420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_41763592_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
ENSMUST00000041466.14	chr5	+	2492	4	FSM	ENSMUSG00000034173.14	ENSMUST00000041466.14	2492	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	2120.04764097414	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGTCTCAAAAAAAATTT	6005	False	NA	NA	False	AATAAA	-17	NA	129924563	129932464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129924694_129928023_129928274_129929185_129929337_129930503
ENSMUST00000041500.8	chr2	+	2812	2	FSM	ENSMUSG00000032802.9	ENSMUST00000041500.8	2812	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAACAGTTTTGGTTGTG	NA	False	NA	31	True	NA	NA	NA	151947443	151953296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151947868_151950908
ENSMUST00000041569.5	chr8	+	1288	9	FSM	ENSMUSG00000036598.5	ENSMUST00000041569.5	1288	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.77263412660235	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTCCTCTCACTTGTTG	NA	False	NA	NA	False	ATTAAA	-23	NA	96260712	96285518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_96260901_96263092_96263220_96264719_96264882_96267426_96267583_96269249_96269331_96272521_96272678_96277824_96277933_96283818_96283975_96285364
ENSMUST00000041588.13	chr5	+	3333	14	FSM	ENSMUSG00000000148.18	ENSMUST00000041588.13	3333	14	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	10.6471097836719	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTTCTCTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	140690765	140705134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ENSMUST00000041616.15	chr10	-	5124	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	0	0	0	0	multi-exon	TRUE	canonical	3	285	junction_4	40.3910881259715	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTAGTGTGGTCATTTCT	6802	False	NA	-2	True	AATAAA	-17	NA	78300809	78272577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
ENSMUST00000041621.5	chr1	+	1485	2	FSM	ENSMUSG00000037216.6	ENSMUST00000041621.5	1485	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCCTTTTCCTTAAGG	NA	False	NA	15	True	ATTAAA	-15	NA	37911286	37915309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_37911407_37913944
ENSMUST00000041638.8	chr1	-	4582	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_11	22.8358062796764	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCACCTTTTAAACTTT	6700	False	NA	-6	True	AATAAA	-19	NA	54478130	54435162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ENSMUST00000041640.5	chr12	+	2456	10	FSM	ENSMUSG00000036188.5	ENSMUST00000041640.5	2456	10	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_5	20.5882622678524	637	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGTTTCATAATTCGT	NA	False	NA	21	True	AATAAA	-20	NA	36207112	36247290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_36207423_36215868_36215934_36220447_36220587_36226578_36226678_36232346_36232508_36236724_36236940_36237648_36237785_36243668_36243798_36244982_36245113_36246218
ENSMUST00000041686.10	chr19	-	1000	6	FSM	ENSMUSG00000037349.10	ENSMUST00000041686.10	1000	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	17.04582060213	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTTAGCTTCTGCTGCT	7045	False	NA	-3	True	AATAAA	-17	NA	6973405	6970385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6972138_6972609_6973104_6973375
ENSMUST00000041736.11	chr6	+	2653	10	FSM	ENSMUSG00000034245.11	ENSMUST00000041736.11	2653	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	4.60541817245838	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGGCAGCTGCCCAAGAT	NA	False	NA	29	True	AATAAA	-31	NA	91133646	91151674	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_91133830_91134378_91134528_91136142_91136244_91142542_91142660_91143224_91143268_91144785_91144863_91145790_91145854_91146376_91146474_91149146_91149326_91150030
ENSMUST00000041806.13	chr12	+	2690	12	FSM	ENSMUSG00000019969.15	ENSMUST00000041806.13	2690	12	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_9	21.5122490573192	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTCTCTGTCCTGGCTGG	3345	False	NA	9	True	ATTAAA	-20	NA	83734925	83781869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ENSMUST00000041826.14	chr3	+	2678	10	FSM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_9	27.8053196793192	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTTTGTTGAGTTTT	NA	False	NA	NA	False	AAGAAA	-42	NA	57643482	57742652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ENSMUST00000041830.10	chr2	+	1387	4	FSM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_2	33.3466640010661	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTGGATGTATGT	NA	False	NA	27	True	AATAAA	-33	NA	30697837	30713045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30698096_30709640_30709845_30710460_30710714_30712373
ENSMUST00000041882.7	chr10	+	678	3	FSM	ENSMUSG00000035595.7	ENSMUST00000041882.7	678	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	13	457	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGTGTCCTGGTGAAGT	NA	False	NA	43	True	AATGAA	-45	NA	80008777	80010980	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80009009_80010042_80010160_80010650
ENSMUST00000041905.8	chr14	-	3913	15	FSM	ENSMUSG00000114797.2	ENSMUST00000041905.8	3913	15	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	25.178546099278	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGTAGGTCTCAGCA	NA	False	NA	-16	True	AATAAA	-18	NA	60488956	60455526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ENSMUST00000041954.10	chr3	-	892	4	FSM	ENSMUSG00000036513.16	ENSMUST00000041954.10	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	244.439949453621	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCTAGACAGTTC	NA	False	NA	-11	True	AATAAA	-19	NA	57559129	57553779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_57554298_57557462_57557637_57558842_57558921_57559007
ENSMUST00000041968.11	chr7	-	3700	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGGGTTTTATTTCCAT	NA	False	NA	NA	False	AATAAA	-24	NA	88987995	88788921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ENSMUST00000042012.7	chr8	-	4525	26	FSM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_23	101.482656646345	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTTTGCCACTGTGAA	NA	False	NA	-18	True	ATTAAA	-22	NA	111573408	111536870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ENSMUST00000042055.10	chr2	+	2586	10	FSM	ENSMUSG00000039515.12	ENSMUST00000042055.10	2586	10	0	0	0	0	multi-exon	TRUE	canonical	3	440	junction_4	51.3501655905104	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	False	NA	17	True	ATTAAA	-20	NA	30306050	30337817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
ENSMUST00000042084.13	chr13	+	3074	20	FSM	ENSMUSG00000021666.17	ENSMUST00000042084.13	3074	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	59.2215428348002	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAGCCTAACA	NA	False	NA	NA	False	AATAAA	-15	NA	97274444	97312949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ENSMUST00000042105.11	chr7	-	2333	3	FSM	ENSMUSG00000040435.13	ENSMUST00000042105.11	2333	3	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_2	34	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTACGTGTGTTCTTTAT	3861	False	NA	44	True	AATAAA	-24	NA	45175692	45172340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45172747_45173162_45174816_45175418
ENSMUST00000042122.15	chr13	+	1633	16	FSM	ENSMUSG00000003992.16	ENSMUST00000042122.15	1633	16	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_4	12.5973542195706	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTCATTCACTGTGTC	2762	False	NA	-6	True	AATAAA	-14	NA	91609209	91849355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ENSMUST00000042135.14	chr5	+	2914	21	FSM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_7	10.6273232754067	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGAGGTGTTGGGTTGGG	2152	False	NA	NA	False	AATAAA	-20	NA	136112769	136140714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ENSMUST00000042141.12	chr1	-	4616	28	FSM	ENSMUSG00000042699.12	ENSMUST00000042141.12	4616	28	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_24	29.9642219210858	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGTCATTGATGTTCT	NA	False	NA	-1	True	AATAAA	-18	NA	153363406	153331503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ENSMUST00000042146.15	chr5	+	1473	10	FSM	ENSMUSG00000029125.15	ENSMUST00000042146.15	1473	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	33.2335543660691	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTCAGTGAGTCTCCA	NA	False	NA	19	True	AATAAA	-19	NA	38196594	38294167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293606
ENSMUST00000042147.6	chr5	-	2075	15	FSM	ENSMUSG00000033294.12	ENSMUST00000042147.6	2075	15	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_9	55.5126847059778	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTGGCTAAATGTTTTT	8841	False	NA	NA	False	NA	NA	NA	110801283	110796283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ENSMUST00000042148.6	chr3	-	783	3	FSM	ENSMUSG00000040269.6	ENSMUST00000042148.6	783	3	0	0	0	0	multi-exon	FALSE	canonical	3	890	junction_1	0.5	4905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGCCGTGGTTCTTTT	NA	False	NA	-1	True	NA	NA	NA	8988978	8867205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_8867475_8965045_8965228_8988646
ENSMUST00000042163.15	chr5	+	5447	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAGGTTTGTTGAGACT	NA	False	NA	19	True	AATACA	-18	NA	121535998	121580472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ENSMUST00000042166.11	chr7	+	1452	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	195	3295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTAGTTTTGACAGCCC	NA	False	NA	NA	False	AATAAA	-30	NA	81412672	81419239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_81412805_81417274_81417472_81418116
ENSMUST00000042191.12	chr5	+	832	4	FSM	ENSMUSG00000034211.15	ENSMUST00000042191.12	832	4	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	196.309845793724	2226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGCAGCTTGATTTT	760	False	NA	23	True	CATAAA	-12	NA	129792566	129795544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129792614_129792747_129792828_129793790_129793931_129794979
ENSMUST00000042227.15	chr11	+	2196	5	FSM	ENSMUSG00000041623.18	ENSMUST00000042227.15	2196	5	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	114.630929508575	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575237	113585473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_113575637_113578599_113580048_113582554_113582660_113583220_113583329_113585337
ENSMUST00000042235.15	chr9	+	1794	8	Antisense	novelGene_ENSMUSG00000076138.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	269223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGCGGAGCCAGCACACG	NA	False	NA	NA	False	NA	NA	NA	78385730	78389006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr9_+_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388920
ENSMUST00000042281.14	chr11	+	1553	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	30.3845721085919	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGCTCTTAGTTTGGC	NA	False	NA	NA	False	NA	NA	NA	60721456	60749249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
ENSMUST00000042329.12	chrX	+	2447	5	FSM	ENSMUSG00000042271.14	ENSMUST00000042329.12	2447	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	115.070358911407	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCAAGTCTTTCTTA	NA	False	NA	11	True	AATAAA	-22	NA	141010932	141022688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_141011010_141011286_141011378_141012519_141012607_141019779_141019925_141020641
ENSMUST00000042334.16	chr17	+	830	6	FSM	ENSMUSG00000037805.16	ENSMUST00000042334.16	830	6	0	0	0	0	multi-exon	FALSE	canonical	3	5482	junction_4	1458.64553610533	139806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGCCTGTGATTG	NA	False	NA	1	True	AATAAA	-20	NA	28547444	28550007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
ENSMUST00000042345.8	chr18	+	3733	18	FSM	ENSMUSG00000037815.8	ENSMUST00000042345.8	3733	18	0	0	0	0	multi-exon	FALSE	canonical	3	1584	junction_14	159.493141807844	1922	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCAGAAGTCGTTCTT	NA	False	NA	33	True	AATAAA	-21	NA	35251911	35387832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ENSMUST00000042390.5	chr2	+	3755	13	FSM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_8	34.4394597647653	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3965	False	NA	33	True	ATTAAA	-21	NA	25222740	25242224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ENSMUST00000042391.13	chr9	+	2658	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_2	7.15454401062709	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGAGCATGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	50679535	50684648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
ENSMUST00000042405.8	chr7	+	1197	9	FSM	ENSMUSG00000046865.8	ENSMUST00000042405.8	1197	9	0	0	0	0	multi-exon	FALSE	canonical	3	2081	junction_3	279.620725269069	3814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8531	False	NA	0	True	ATTAAA	-14	NA	27869134	27878694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
ENSMUST00000042477.13	chr11	+	1106	6	FSM	ENSMUSG00000078656.12	ENSMUST00000042477.13	1106	6	0	0	0	0	multi-exon	FALSE	canonical	3	1136	junction_3	45.4682306671372	3715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTGTTACTACTGCTG	NA	False	NA	20	True	ATTAAA	-17	NA	101144532	101150375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149735
ENSMUST00000042493.10	chr1	-	1705	5	FSM	ENSMUSG00000042111.10	ENSMUST00000042493.10	1705	5	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	5.33853912601566	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCTCTCATTTTATTTT	7204	False	NA	1	True	AATAAA	-23	NA	34478753	34475750	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_34476692_34476807_34476940_34477930_34478014_34478123_34478228_34478308
ENSMUST00000042497.14	chr19	-	1661	10	FSM	ENSMUSG00000037916.15	ENSMUST00000042497.14	1661	10	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_6	107.070877644232	4249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAACTTTGCTTTTC	6426	False	NA	3	True	AATAAA	-30	NA	4062806	4057496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ENSMUST00000042498.14	chr1	-	4427	28	FSM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_27	104.811974833924	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93373408	93335483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93373301
ENSMUST00000042509.13	chr1	-	5882	28	FSM	ENSMUSG00000040648.16	ENSMUST00000042509.13	5882	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	45.2326708589218	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACATAGCAGTGTATTG	8834	False	NA	78	True	AATAAA	-15	NA	97698136	97633772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ENSMUST00000042546.4	chr9	-	2653	13	FSM	ENSMUSG00000037949.9	ENSMUST00000042546.4	2653	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	6.44797556515911	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCAAATGTTTCAAGCTG	NA	False	NA	3	True	ATTAAA	-37	NA	122123489	122004939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_122005545_122030836_122030954_122080212_122080342_122082001_122082194_122086121_122086305_122087982_122088058_122088600_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122101432_122101631_122104576_122104730_122123369
ENSMUST00000042556.11	chr10	-	3872	21	FSM	ENSMUSG00000032834.12	ENSMUST00000042556.11	3872	21	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_16	14.9260678009984	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTGTCTGTGTGTGG	NA	False	NA	-5	True	AATACA	-17	NA	78020983	78006742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
ENSMUST00000042564.17	chr14	-	2573	9	FSM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	1775.59757106587	5635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTATTGCTGTACTT	NA	False	NA	-18	True	AATAAA	-11	NA	36857096	36842780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36856921
ENSMUST00000042575.7	chr4	-	3856	3	FSM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	19	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGCAACATTGATT	9561	False	NA	0	True	AATAAA	-28	NA	40269850	40259600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_40263082_40268303_40268502_40269673
ENSMUST00000042662.10	chr14	-	2240	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	0	0	0	0	multi-exon	FALSE	canonical	3	792	junction_1	24.5	1401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGTCCTTTTGATATAC	NA	False	NA	NA	False	AATAAA	-18	NA	99283556	99271979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_99273947_99277950_99278097_99283429
ENSMUST00000042700.12	chr19	-	797	7	FSM	ENSMUSG00000038155.12	ENSMUST00000042700.12	797	7	0	0	0	0	multi-exon	FALSE	canonical	3	1174	junction_6	961.706469424706	35614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCCGTT	NA	False	NA	NA	False	AATAAA	-16	NA	4092263	4090284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092164
ENSMUST00000042702.7	chr15	+	1164	5	FSM	ENSMUSG00000039065.12	ENSMUST00000042702.7	1164	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	6.68954408012983	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACCGTGACAAGGAGTG	115	False	NA	27	True	ATTAAA	-27	NA	31602263	31617681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_31602296_31606056_31606335_31608241_31608380_31609711_31609763_31617016
ENSMUST00000042753.14	chr5	-	2368	5	FSM	ENSMUSG00000040302.18	ENSMUST00000042753.14	2368	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	28.3813318926368	412	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTATCTGCGTGTC	1474	False	NA	-9	True	AATAAA	-21	NA	3646585	3633977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_3634808_3640222_3640804_3641669_3641816_3645254_3645446_3645965
ENSMUST00000042771.8	chr10	-	4227	32	FSM	ENSMUSG00000035673.11	ENSMUST00000042771.8	4227	32	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_31	40.678557708356	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTACTTCAGCCTCTGG	NA	False	NA	NA	False	NA	NA	NA	79938532	79893249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894567_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938450
ENSMUST00000042775.5	chr2	-	1014	2	FSM	ENSMUSG00000039873.5	ENSMUST00000042775.5	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGAGGGTCTCCTTGC	NA	False	NA	NA	False	AATAAA	-24	NA	164675376	164672651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_164672908_164674618
ENSMUST00000042790.5	chr9	-	773	2	FSM	ENSMUSG00000038086.5	ENSMUST00000042790.5	773	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTGCTGCTTCTGT	NA	False	NA	-7	True	AATAAA	-16	NA	50663593	50662377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_50663034_50663476
ENSMUST00000042834.4	chr13	-	1363	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	0	0	0	0	multi-exon	FALSE	canonical	3	2063	junction_1	0	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTATTATTTTGTTGAA	NA	False	NA	-2	True	ATTAAA	-19	NA	30729345	30724290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_30725325_30729016
ENSMUST00000042901.15	chr3	+	4316	24	FSM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_3	142.05353233605	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912070	68941956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ENSMUST00000042923.9	chr10	-	1891	8	FSM	ENSMUSG00000034748.17	ENSMUST00000042923.9	1891	8	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	20.6723713873254	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTACATTTATGTA	9658	False	NA	-11	True	AATAAA	-25	NA	81463631	81457620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
ENSMUST00000042942.10	chr7	+	4505	19	FSM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_10	14.275615919341	2726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTCTCTCCCTGTTTC	1931	False	NA	23	True	AATAAA	-35	NA	128346666	128386560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151
ENSMUST00000042964.13	chr4	+	2835	4	FSM	ENSMUSG00000039634.13	ENSMUST00000042964.13	2835	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	22.553639765383	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAAAAAATGACCT	NA	False	NA	NA	False	AAGAAA	-35	NA	49521175	49531517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_49521252_49521422_49521596_49522397_49522483_49529016
ENSMUST00000042974.15	chr6	+	1773	3	FSM	ENSMUSG00000035104.15	ENSMUST00000042974.15	1773	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	1.5	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTTCGTGTCTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	82018603	82070080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_82018883_82048035_82048224_82068774
ENSMUST00000042988.7	chr14	-	3450	10	FSM	ENSMUSG00000037526.8	ENSMUST00000042988.7	3450	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	17.6572301841987	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTGTGTGTGTCTGT	NA	False	NA	-5	True	AATAAA	-13	NA	47805891	47778350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642
ENSMUST00000043045.10	chrX	+	1609	11	FSM	ENSMUSG00000039382.13	ENSMUST00000043045.10	1609	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	40.4807361593141	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGGCGTGCTTTCCCG	4006	False	NA	22	True	AATAAA	-35	NA	7588455	7594445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ENSMUST00000043074.14	chr19	+	508	5	FSM	ENSMUSG00000038274.14	ENSMUST00000043074.14	508	5	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_1	5677.26170790109	109855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTTATGTTTTCTTC	1081	False	NA	1	True	AATAAA	-13	NA	6107972	6109546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6108032_6108275_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUST00000043098.9	chr6	-	1223	4	FSM	ENSMUSG00000036390.9	ENSMUST00000043098.9	1223	4	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	3.77123616632825	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTTCTCAACGTGTGGT	NA	False	NA	-7	True	AATAAA	-19	NA	67014390	67012079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_67012757_67013661_67013900_67013993_67014096_67014184
ENSMUST00000043112.9	chr14	+	2937	2	FSM	ENSMUSG00000037536.15	ENSMUST00000043112.9	2937	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAGGTCTGGTCTTAA	NA	False	NA	6	True	AATAAA	-14	NA	47710017	47769411	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_47710175_47766631
ENSMUST00000043148.13	chr6	+	4248	5	FSM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	0	0	0	0	multi-exon	FALSE	canonical	2	79	junction_3	124.109578598914	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCCCTTTCTCTTCAT	NA	False	NA	57	True	AATAAA	-15	NA	66873380	66998334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_66873512_66891436_66891495_66920808_66920862_66992708_66992828_66994447
ENSMUST00000043152.6	chr11	-	3877	19	FSM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_5	33.8632416611651	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGAGAATGTTAATCTT	NA	False	NA	-14	True	NA	NA	NA	79853216	79824778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
ENSMUST00000043160.13	chr2	-	4888	35	FSM	ENSMUSG00000040383.17	ENSMUST00000043160.13	4888	35	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_21	28.9958832539162	839	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGCATACTTGCCCTT	7809	False	NA	-3	True	ATTAAA	-19	NA	114005820	113931650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ENSMUST00000043169.14	chr12	-	5446	20	FSM	ENSMUSG00000042350.14	ENSMUST00000043169.14	5446	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	22.9818668733885	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTAAATGAGTGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	85017674	84964923	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
ENSMUST00000043269.14	chr13	-	2676	16	FSM	ENSMUSG00000021546.19	ENSMUST00000043269.14	2676	16	0	0	0	0	multi-exon	FALSE	canonical	3	4513	junction_1	1087.93485507584	5672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4765	False	NA	-23	True	AATAAA	-15	NA	58550316	58539052	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUST00000043273.16	chr7	+	884	8	FSM	ENSMUSG00000078765.12	ENSMUST00000043273.16	884	8	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	81.3154602866678	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGGTTTCCTTCCACC	NA	False	NA	36	True	AATAAA	-24	NA	30262745	30264790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ENSMUST00000043286.15	chr18	-	2591	10	FSM	ENSMUSG00000038425.19	ENSMUST00000043286.15	2591	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_9	76.3322820564839	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGGCTCTCACTGTAAGT	NA	False	NA	-16	True	AATAAA	-19	NA	70663505	70641754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70663258
ENSMUST00000043311.7	chr10	+	3499	22	FSM	ENSMUSG00000035697.15	ENSMUST00000043311.7	3499	22	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_7	15.7468637773006	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCCCGATCTTGTTCTT	820	False	NA	12	True	AATAAA	-17	NA	79855486	79867302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ENSMUST00000043333.9	chr6	-	1708	10	FSM	ENSMUSG00000048930.13	ENSMUST00000043333.9	1708	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	139.396317502771	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAAAAAAACCACCCGC	NA	False	NA	18	True	AATAAA	-36	NA	113354337	113343615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351796_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
ENSMUST00000043342.10	chr3	+	1576	8	FSM	ENSMUSG00000033554.18	ENSMUST00000043342.10	1576	8	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_6	12.9331089117215	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCAGTCAGCGACTGAG	7758	False	NA	NA	False	TTTAAA	-6	NA	115681831	115722981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
ENSMUST00000043396.15	chr12	-	2674	3	FSM	ENSMUSG00000037169.16	ENSMUST00000043396.15	2674	3	0	0	0	0	multi-exon	FALSE	canonical	3	794	junction_2	66.5	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGATGTTTTCCTTCCTAG	NA	False	NA	-18	True	AATAAA	-20	NA	12991915	12986093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_12987612_12989610_12990488_12991636
ENSMUST00000043419.10	chr11	-	1437	7	FSM	ENSMUSG00000078812.11	ENSMUST00000043419.10	1437	7	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_6	9644.56352477049	29070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	9941	False	NA	-15	True	AATAAA	-20	NA	69812212	69807545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166_69811261_69811988
ENSMUST00000043429.12	chr4	-	1932	10	FSM	ENSMUSG00000032897.18	ENSMUST00000043429.12	1932	10	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_8	23.5424491839793	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	-1	True	AATAAA	-20	NA	120682903	120614634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
ENSMUST00000043484.8	chr18	+	1926	8	FSM	ENSMUSG00000038555.8	ENSMUST00000043484.8	1926	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.56347977784662	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGATCTCTGCGTTGTT	NA	False	NA	16	True	AATAAA	-22	NA	34973641	34980516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_34973841_34975506_34975580_34975909_34975987_34978304_34978426_34978627_34978742_34978997_34979146_34979241_34979373_34979453
ENSMUST00000043498.9	chr18	-	2032	15	FSM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_2	40.0044002681746	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTAGTTAGGCCATG	NA	False	NA	-5	True	AATAAA	-21	NA	38088069	38070024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ENSMUST00000043520.5	chr8	+	2012	10	FSM	ENSMUSG00000038365.9	ENSMUST00000043520.5	2012	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	11.3572731903828	304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTTTCTGCAACAAT	NA	False	NA	14	True	AATAAA	-20	NA	13957802	13990522	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
ENSMUST00000043552.17	chr13	-	1547	7	FSM	ENSMUSG00000060147.16	ENSMUST00000043552.17	1547	7	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_6	98.4119742036845	1820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGTCTGCCTCACTGG	8257	False	NA	2	True	AATAAA	-28	NA	34120181	34101900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119904
ENSMUST00000043584.5	chr2	-	1598	4	FSM	ENSMUSG00000036752.5	ENSMUST00000043584.5	1598	4	0	0	0	0	multi-exon	FALSE	canonical	3	1343	junction_2	25.8499946271217	11816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGCCTGTCCAATTCCT	NA	False	NA	-24	True	ATTAAA	-18	NA	25114714	25112171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_25113381_25113945_25114057_25114135_25114245_25114545
ENSMUST00000043627.8	chr11	+	1316	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	0	0	0	0	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	7537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGTGTAACCCTGGCC	8955	False	NA	NA	False	NA	NA	NA	120375438	120379891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
ENSMUST00000043654.10	chr11	+	1754	11	FSM	ENSMUSG00000045007.10	ENSMUST00000043654.10	1754	11	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_5	90.3044295702044	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGCTTTGTTTGTGACT	1651	False	NA	NA	False	AATAAA	-22	NA	101046732	101052613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101046995_101047273_101047387_101047578_101047747_101048277_101048347_101048608_101048689_101049834_101049962_101050882_101050970_101051072_101051223_101051619_101051773_101051852_101052015_101052230
ENSMUST00000043675.9	chr9	-	544	3	FSM	ENSMUSG00000038717.10	ENSMUST00000043675.9	544	3	0	0	0	0	multi-exon	FALSE	canonical	3	4613	junction_2	56	21195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGTTGTCTTTGGCTTT	NA	False	NA	24	True	NA	NA	NA	44832040	44824514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_44824765_44825948_44826110_44831907
ENSMUST00000043680.9	chr11	+	1802	11	FSM	ENSMUSG00000035198.10	ENSMUST00000043680.9	1802	11	0	0	0	0	multi-exon	TRUE	canonical	3	373	junction_8	104.461715475096	2231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCCCCGGTCTCTGAA	1230	False	NA	16	True	AATAAA	-19	NA	101010763	101017245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
ENSMUST00000043735.8	chr10	+	3535	28	FSM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_27	66.4418431300526	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTCAGCTAGTAAAGCCA	NA	False	NA	14	True	AATAAA	-19	NA	3923143	4106111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ENSMUST00000043757.15	chr17	-	3161	23	FSM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	0	0	0	0	multi-exon	FALSE	canonical	3	801	junction_12	70.1887066803097	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGGGGTGCT	NA	False	NA	-12	True	AATAAA	-18	NA	36280653	36267710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ENSMUST00000043760.15	chr5	+	1660	11	FSM	ENSMUSG00000041939.15	ENSMUST00000043760.15	1660	11	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_10	13.5410487038486	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGGCCCTGTGGGAAG	NA	False	NA	NA	False	AATAAA	-20	NA	114582366	114598652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ENSMUST00000043785.8	chr17	-	1509	13	FSM	ENSMUSG00000038781.8	ENSMUST00000043785.8	1509	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	11.0839598820398	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGTGGCTGTAGGATT	NA	False	NA	-4	True	NA	NA	NA	56312584	56304076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56304362_56304459_56304535_56304604_56304698_56304777_56304952_56306742_56306809_56306912_56307016_56307086_56307157_56307479_56307615_56307900_56308002_56309011_56309069_56309852_56309976_56310129_56310202_56312429
ENSMUST00000043794.11	chr5	+	2383	13	FSM	ENSMUSG00000063646.19	ENSMUST00000043794.11	2383	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	48.883080463035	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	NA	False	NA	17	True	AATAAA	-20	NA	37208200	37282643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_37208320_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ENSMUST00000043814.5	chr10	-	3282	23	FSM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_19	28.6394298502739	595	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTTTTGCTTCTGACT	NA	False	NA	-25	True	AATAAA	-17	NA	41179256	41064167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ENSMUST00000043815.16	chr6	+	6412	43	FSM	ENSMUSG00000038759.16	ENSMUST00000043815.16	6412	43	0	0	0	0	multi-exon	FALSE	canonical	2	193	junction_5	62.1117418909309	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAATGTGTGGTCATTC	NA	False	NA	NA	False	AATAAA	-16	NA	35154364	35224531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ENSMUST00000043822.8	chr7	-	1662	12	FSM	ENSMUSG00000040525.14	ENSMUST00000043822.8	1662	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	3.71283233757493	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCCGTGTGTGACAGAG	NA	False	NA	1	True	AATAAA	-20	NA	19530734	19513642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_19513722_19514697_19514773_19514894_19515002_19518727_19518806_19519162_19519325_19520107_19520240_19522893_19522982_19524324_19524463_19526032_19526155_19526433_19526591_19526733_19526881_19530357
ENSMUST00000043839.5	chr1	+	2518	10	FSM	ENSMUSG00000038235.5	ENSMUST00000043839.5	2518	10	0	0	0	0	multi-exon	FALSE	canonical	1	67	junction_8	70.6616000978966	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTATGTTTTTTTTT	NA	False	NA	23	True	ATTAAA	-23	NA	171265102	171292171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290170_171290184_171290456_171290509_171290626
ENSMUST00000043848.11	chr6	-	4629	32	FSM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_21	78.9640126675822	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3395	False	NA	-9	True	AATAAA	-20	NA	125168664	125144969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ENSMUST00000043867.11	chr3	+	552	4	FSM	ENSMUSG00000039221.11	ENSMUST00000043867.11	552	4	0	0	0	0	multi-exon	FALSE	canonical	3	2038	junction_1	2670.46824857864	30923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAACATGTATGGTTCA	NA	False	NA	10	True	AATAAA	-15	NA	28859584	28861564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_28859693_28860648_28860742_28860885_28861008_28861335
ENSMUST00000043870.9	chr7	-	1650	2	FSM	ENSMUSG00000038489.9	ENSMUST00000043870.9	1650	2	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_1	0	15070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	8000	False	NA	NA	False	NA	NA	NA	141055045	141051772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_141053318_141054940
ENSMUST00000043881.12	chr10	+	5437	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_11	110.864375352149	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2805	False	NA	14	True	AATAAA	-15	NA	20188229	20218245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ENSMUST00000043898.8	chr7	-	708	4	FSM	ENSMUSG00000036835.8	ENSMUST00000043898.8	708	4	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_3	125.517595048131	3518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGTTCTTGGGATCTT	1290	False	NA	-5	True	AATAAA	-17	NA	30262666	30261289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30261560_30261748_30261854_30262220_30262364_30262476
ENSMUST00000043907.14	chr17	+	918	3	FSM	ENSMUSG00000038880.14	ENSMUST00000043907.14	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_1	12	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	False	NA	16	True	AATAAA	-16	NA	25114089	25115263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25114463_25114635_25114679_25114761
ENSMUST00000043914.8	chr14	+	2674	17	FSM	ENSMUSG00000021975.10	ENSMUST00000043914.8	2674	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_12	28.2795752266543	654	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCAGTTCTATTGCACT	NA	False	NA	17	True	AATAAA	-17	NA	65187493	65277281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
ENSMUST00000043929.11	chr18	+	1618	11	FSM	ENSMUSG00000038903.14	ENSMUST00000043929.11	1618	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	8.64869932417586	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCATGTCCTTCCA	NA	False	NA	3	True	AATAAA	-14	NA	70058536	70102555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_70058692_70071912_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
ENSMUST00000043931.9	chr11	-	625	6	FSM	ENSMUSG00000034566.11	ENSMUST00000043931.9	625	6	0	0	0	0	multi-exon	FALSE	canonical	3	1974	junction_5	551.930285452792	21027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115310788	115306514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310717
ENSMUST00000043937.9	chr3	-	1067	4	FSM	ENSMUSG00000041084.9	ENSMUST00000043937.9	1067	4	0	0	0	0	multi-exon	FALSE	canonical	3	1781	junction_1	135.7063823931	6674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACTTTTTGTTGT	NA	False	NA	1	True	AATAAA	-24	NA	130503093	130489560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_130490128_130496964_130497163_130499598_130499693_130502885
ENSMUST00000043951.10	chr1	-	3248	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	31.3043128019128	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGAGTAAATATAGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	36749089	36737194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ENSMUST00000043962.9	chr8	+	2301	18	FSM	ENSMUSG00000038416.16	ENSMUST00000043962.9	2301	18	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_10	60.600055957127	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCAAGCTGGTAGAGTG	NA	False	NA	17	True	AATAAA	-24	NA	13807675	13831938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ENSMUST00000043964.13	chr5	-	3787	8	FSM	ENSMUSG00000039474.14	ENSMUST00000043964.13	3787	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_7	10.259888211986	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCCTTCTGGTTTGAT	NA	False	NA	1	True	AATAAA	-18	NA	37146549	37123447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_37126023_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
ENSMUST00000043975.11	chr7	-	998	9	FSM	ENSMUSG00000036845.13	ENSMUST00000043975.11	998	9	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	22.8363744933385	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATCTCAAGTGCATTTA	4885	False	NA	-6	True	NA	NA	NA	30259071	30254865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257384_30258866
ENSMUST00000044005.14	chr16	+	2778	11	FSM	ENSMUSG00000039200.17	ENSMUST00000044005.14	2778	11	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	27.1632104140877	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTTACTGTCTTTTA	NA	False	NA	7	True	AATAAA	-15	NA	10010575	10060915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10059409
ENSMUST00000044007.3	chr11	-	813	2	FSM	ENSMUSG00000039670.3	ENSMUST00000044007.3	813	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCAGGGGCTTTTGTGT	959	False	NA	-6	True	AATAAA	-18	NA	120348894	120347431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120347989_120348638
ENSMUST00000044011.12	chr2	+	1658	5	FSM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	0	0	0	0	multi-exon	FALSE	canonical	3	2063	junction_1	209.807501057517	4887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCATGGAGGTTGC	NA	False	NA	25	True	AATAAA	-26	NA	151384402	151403612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
ENSMUST00000044019.16	chr6	+	2412	11	FSM	ENSMUSG00000030089.16	ENSMUST00000044019.16	2412	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	19.246038553427	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGTCCTCCATCCTTC	9924	False	NA	NA	False	AATAAA	-17	NA	90581706	90623394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_90581991_90588860_90589164_90601793_90601902_90603361_90603434_90610592_90610738_90612231_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550
ENSMUST00000044021.12	chr1	+	3571	6	FSM	ENSMUSG00000040918.13	ENSMUST00000044021.12	3571	6	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_3	19.417517864032	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTATTTTGAGTTCATC	NA	False	NA	29	True	AATAAA	-31	NA	164076614	164092954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ENSMUST00000044038.10	chr2	-	1876	13	FSM	ENSMUSG00000039648.15	ENSMUST00000044038.10	1876	13	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_12	20.7811011899434	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCTTCTCTCTTCCTTT	NA	False	NA	-3	True	AATAAA	-25	NA	30095859	30075135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30095644
ENSMUST00000044048.8	chr7	+	1363	3	FSM	ENSMUSG00000036854.15	ENSMUST00000044048.8	1363	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	10.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTATGTCTGGGCCAG	NA	False	NA	12	True	AATAAA	-20	NA	30252692	30254868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30252958_30253686_30253810_30253893
ENSMUST00000044051.6	chr9	+	518	2	FSM	ENSMUSG00000039016.6	ENSMUST00000044051.6	518	2	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	0	8856	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTCTTCTAAATCCC	8813	False	NA	21	True	AATAAA	-15	NA	50515209	50516620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_50515340_50516232
ENSMUST00000044058.11	chr4	+	3733	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	1.24721912892465	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGGTTGTGGCTGGAT	NA	False	NA	24	True	NA	NA	NA	138161981	138169576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
ENSMUST00000044068.10	chr16	+	4178	17	FSM	ENSMUSG00000039456.11	ENSMUST00000044068.10	4178	17	0	0	0	0	multi-exon	TRUE	non_canonical	1	193	junction_4	108.324454764379	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGGTAACTGAAAGTTA	974	False	NA	15	True	AATAAA	-26	NA	93629008	93672960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ENSMUST00000044103.6	chr16	+	805	3	FSM	ENSMUSG00000039209.13	ENSMUST00000044103.6	805	3	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_1	5	4204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATTGCTCTCTGGTCCT	NA	False	NA	68	True	NA	NA	NA	9988091	9992775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_9988189_9988278_9988356_9992144
ENSMUST00000044106.6	chr8	-	1581	7	FSM	ENSMUSG00000039067.6	ENSMUST00000044106.6	1581	7	0	0	0	0	multi-exon	FALSE	canonical	3	2367	junction_5	170.70409745782	8439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCTAGTGGTT	NA	False	NA	-6	True	ATTAAA	-14	NA	108315096	108307012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ENSMUST00000044116.14	chr3	+	3770	9	FSM	ENSMUSG00000036580.16	ENSMUST00000044116.14	3770	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	65.469339197826	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATGTATTCACTGGAC	NA	False	NA	21	True	AATAAA	-22	NA	55019528	55044743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUST00000044143.6	chr19	-	745	2	FSM	ENSMUSG00000039097.6	ENSMUST00000044143.6	745	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATATGGATTTGTCCTTT	NA	False	NA	NA	False	NA	NA	NA	29312070	29309106	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_29309567_29311785
ENSMUST00000044148.3	chr4	-	3021	2	FSM	ENSMUSG00000039740.7	ENSMUST00000044148.3	3021	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCAGTTTATGGTTGCG	-17	True	NA	-2	True	AATAAA	-15	NA	47474333	47469832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_47472459_47473938
ENSMUST00000044200.11	chr6	+	2597	16	FSM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	206.283558885983	2907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5437	False	NA	25	True	AATATA	-17	NA	125108871	125121716	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ENSMUST00000044220.11	chr9	-	1169	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	9.03081145609604	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGAAGGCAAGATTTAAC	NA	False	NA	NA	False	ATTAAA	-17	NA	117979245	117893589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
ENSMUST00000044224.5	chr5	+	2021	6	FSM	ENSMUSG00000032623.10	ENSMUST00000044224.5	2021	6	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	11.5654658358408	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATTAATTTATTCTCCC	NA	False	NA	19	True	ATTAAA	-25	NA	121052598	121059715	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ENSMUST00000044252.7	chr17	-	1427	7	FSM	ENSMUSG00000039183.7	ENSMUST00000044252.7	1427	7	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_4	56.4111888034831	2240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAAGGTGTCTGTCTTGT	NA	False	NA	-6	True	AGTAAA	-24	NA	25105322	25101585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
ENSMUST00000044355.11	chr7	-	736	6	FSM	ENSMUSG00000041571.11	ENSMUST00000044355.11	736	6	0	0	0	0	multi-exon	FALSE	canonical	3	1985	junction_1	35.4028247460566	10375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGATGTTTATTTTGGCT	NA	False	NA	-11	True	AATAAA	-21	NA	15656327	15651132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_15651465_15653772_15653872_15653967_15654043_15654229_15654284_15654373_15654399_15656176
ENSMUST00000044369.13	chr1	+	2049	14	FSM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_7	59.3277926628703	1629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTGATGATGAGAAGT	NA	False	NA	98	True	AATAAA	-37	NA	5153302	5232752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ENSMUST00000044382.7	chrX	-	2219	5	FSM	ENSMUSG00000035062.14	ENSMUST00000044382.7	2219	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	3.76662979332984	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGCTAACTGAGTGC	881	False	NA	NA	False	AATAAA	-15	NA	94702115	94682804	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_94684258_94685769_94685933_94686913_94687087_94688912_94689085_94701857
ENSMUST00000044454.12	chr9	+	3396	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTATTTTGTGATTCA	9585	False	NA	4	True	AATATA	-18	NA	117869566	117892907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ENSMUST00000044509.7	chrX	-	2696	7	FSM	ENSMUSG00000041096.14	ENSMUST00000044509.7	2696	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	16.4189930669738	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCTTGGAGTCTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	151125421	151119850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
ENSMUST00000044530.3	chr11	+	3517	11	FSM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_7	9.20923449587424	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTATTGGTTTCCTA	NA	False	NA	35	True	AATAAA	-37	NA	75239258	75296531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ENSMUST00000044556.12	chr2	+	3595	12	FSM	ENSMUSG00000039678.13	ENSMUST00000044556.12	3595	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	5.33195574495097	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCGGTGCTGTGCTGGCT	2697	False	NA	20	True	AATAAA	-19	NA	30023757	30042025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30023925_30024808_30024883_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038634_30038796_30038942_30039001_30039711
ENSMUST00000044567.4	chr3	+	1471	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_5	39.5777091521022	1820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTGTCCTCTTCCTTG	NA	False	NA	18	True	AATAAA	-22	NA	54642959	54657216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ENSMUST00000044608.14	chr13	+	5019	19	FSM	ENSMUSG00000038518.16	ENSMUST00000044608.14	5019	19	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	177.530035712966	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCATCCCTTTTGTAC	9933	False	NA	NA	False	NA	NA	NA	44884298	45074471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_44884411_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ENSMUST00000044675.5	chr2	+	1373	8	FSM	ENSMUSG00000098789.8	ENSMUST00000044675.5	1373	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	32.3128836376389	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857963	119863075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594
ENSMUST00000044681.7	chr6	+	1442	3	FSM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_2	50	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTCTATATGGCACAT	8448	False	NA	10	True	AATAAA	-21	NA	97187649	97210276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_97187958_97206497_97206716_97209360
ENSMUST00000044684.14	chr5	-	3689	18	FSM	ENSMUSG00000035266.17	ENSMUST00000044684.14	3689	18	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_16	11.2714232774287	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGGGTGATTAAGTCTA	NA	False	NA	5	True	ATTAAA	-26	NA	100946464	100910010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ENSMUST00000044691.9	chr1	-	1860	3	FSM	ENSMUSG00000042215.9	ENSMUST00000044691.9	1860	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	4.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAGCATTGGCCATTAT	NA	False	NA	-5	True	NA	NA	NA	33796876	33784564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_33786098_33787297_33787408_33796659
ENSMUST00000044721.13	chr11	+	4008	22	FSM	ENSMUSG00000019302.17	ENSMUST00000044721.13	4008	22	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_19	48.1567734584863	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTCTGAGTGTG	NA	False	NA	17	True	AATAAA	-22	NA	100900277	100954545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100940284_100940303_100945851_100945970_100946259_100946432_100953137
ENSMUST00000044725.9	chr9	-	1668	3	FSM	ENSMUSG00000039461.13	ENSMUST00000044725.9	1668	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGTGTGGTTATTCAA	7285	False	NA	-2	True	ATTAAA	-13	NA	108183189	108180156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_108181453_108182524_108182628_108182920
ENSMUST00000044783.14	chr16	+	5444	33	FSM	ENSMUSG00000045983.17	ENSMUST00000044783.14	5444	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	462.965204171369	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_20491627_20492617_20492712_20492977_20493065_20493535_20493557_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ENSMUST00000044825.5	chr2	+	1166	11	FSM	ENSMUSG00000027384.7	ENSMUST00000044825.5	1166	11	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_10	17.7042367810646	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGTTTGAAGCAAGGTG	NA	False	NA	10	True	AATAAA	-21	NA	140012568	140045609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
ENSMUST00000044923.15	chr12	-	2850	9	FSM	ENSMUSG00000041645.15	ENSMUST00000044923.15	2850	9	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_8	40.7106788815908	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGGGTGTTGCAGTG	NA	False	NA	-12	True	ATTAAA	-20	NA	103392078	103374240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ENSMUST00000044949.11	chr11	-	2139	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTTGGTGGAAGTCA	NA	False	NA	53	True	NA	NA	NA	75081345	75068468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
ENSMUST00000044972.11	chr5	-	1447	9	FSM	ENSMUSG00000040013.12	ENSMUST00000044972.11	1447	9	0	0	0	0	multi-exon	FALSE	canonical	3	793	junction_1	94.8445273856114	2632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCAGTACAATTCATTG	NA	False	NA	-1	True	AATAAA	-20	NA	135378898	135320557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ENSMUST00000045011.9	chr9	-	2572	13	FSM	ENSMUSG00000025646.10	ENSMUST00000045011.9	2572	13	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	14.834971819619	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTTCCTGAGTCCGA	NA	False	NA	1	True	ATTAAA	-26	NA	108903192	108888814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ENSMUST00000045026.4	chr11	+	3887	24	FSM	ENSMUSG00000002055.10	ENSMUST00000045026.4	3887	24	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_10	25.9765053072448	528	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTCCACTGAATCTT	2752	False	NA	8	True	AATAAA	-18	NA	78192354	78213283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ENSMUST00000045028.15	chr1	-	613	3	FSM	ENSMUSG00000067299.12	ENSMUST00000045028.15	613	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	4.5	533	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAAATATTTTCTGTGT	7620	False	NA	-34	True	NA	NA	NA	65102611	65101030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_65101342_65102217_65102461_65102552
ENSMUST00000045035.12	chr7	-	432	4	FSM	ENSMUSG00000040564.15	ENSMUST00000045035.12	432	4	0	0	0	0	multi-exon	FALSE	canonical	3	965	junction_3	145.90027035235	5884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGAAGTGCTTTGG	NA	False	NA	-4	True	AATAAA	-19	NA	19426585	19423405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_19423562_19425812_19425961_19426335_19426412_19426533
ENSMUST00000045078.13	chr4	-	1280	9	Antisense	novelGene_ENSMUSG00000035637.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2040	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGGGGCCGGCGTTAGGG	NA	False	NA	NA	False	NA	NA	NA	44990734	44981394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr4_-_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
ENSMUST00000045142.15	chr4	-	3664	19	FSM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_15	25.8110417562564	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	-17	True	NA	-6	True	AATAAA	-21	NA	56865188	56810934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
ENSMUST00000045173.10	chr13	+	2714	17	FSM	ENSMUSG00000035493.11	ENSMUST00000045173.10	2714	17	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	6.48917367620871	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTGCTAGCTGCGTG	9425	False	NA	NA	False	AATAAA	-16	NA	56757398	56787171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_56757594_56762052_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56784482_56784950_56785031_56785833_56785859_56786529
ENSMUST00000045246.8	chr2	+	3113	22	FSM	ENSMUSG00000026785.15	ENSMUST00000045246.8	3113	22	0	0	0	0	multi-exon	TRUE	canonical	2	22	junction_1	27.5708117374869	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGGTTGTGTAGTGTC	2218	False	NA	21	True	AATAAA	-23	NA	29968595	29981031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29968803_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ENSMUST00000045281.13	chr11	+	5848	19	FSM	ENSMUSG00000038290.16	ENSMUST00000045281.13	5848	19	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	11.7104996677826	320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACCTCTGCTGGTCTATT	NA	False	NA	NA	False	AATAAA	-21	NA	74816648	75055274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ENSMUST00000045295.14	chr2	+	4574	35	FSM	ENSMUSG00000036833.17	ENSMUST00000045295.14	4574	35	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	7.94602248652754	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTACTCTG	NA	False	NA	10	True	AATAAA	-13	NA	24866044	24944069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_24866326_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ENSMUST00000045356.9	chr15	+	835	4	FSM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	0	0	0	0	multi-exon	FALSE	canonical	3	15185	junction_3	3886.71174930972	189583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTCATAGTCCGTGTAG	2248	False	NA	NA	False	NA	NA	NA	5146126	5148622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_5146167_5146768_5146905_5147100_5147186_5148048
ENSMUST00000045366.10	chr8	-	2748	7	FSM	ENSMUSG00000038506.14	ENSMUST00000045366.10	2748	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	9.7082439194738	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	False	NA	-3	True	AATAAA	-14	NA	13337841	13305963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_13307977_13308946_13309044_13311384_13311468_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ENSMUST00000045368.12	chr4	+	4275	6	FSM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	10.8369737473153	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTTTCTGTGTACGTT	0	True	NA	13	True	AATAAA	-22	NA	56802348	56809601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_56802727_56803595_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
ENSMUST00000045374.8	chr11	+	1233	3	FSM	ENSMUSG00000041046.8	ENSMUST00000045374.8	1233	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.5	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTATTTCTCATTTTAT	NA	False	NA	14	True	ATTAAA	-14	NA	6608520	6627475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_6608628_6624762_6624896_6626482
ENSMUST00000045376.11	chr14	+	1782	11	FSM	ENSMUSG00000039197.11	ENSMUST00000045376.11	1782	11	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_9	34.7499640287584	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTCTGTCTTGCTTG	NA	False	NA	16	True	AATAAA	-19	NA	21102641	21498637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ENSMUST00000045388.8	chr1	-	1578	5	FSM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	16.3477827242718	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAGTGTATAATAATA	NA	False	NA	NA	False	AATAAA	-26	NA	185849507	185819927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_185820966_185821640_185821757_185832389_185832560_185846460_185846561_185849353
ENSMUST00000045396.9	chr19	-	3676	26	FSM	ENSMUSG00000039901.11	ENSMUST00000045396.9	3676	26	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_20	17.3221707646588	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	6647	False	NA	-3	True	ATTAAA	-17	NA	45986927	45805802	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ENSMUST00000045441.8	chr2	+	3909	20	FSM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_10	16.3671517531211	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTATCTGCATTTCCA	NA	False	NA	23	True	ATTAAA	-23	NA	150628654	150673678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
ENSMUST00000045454.9	chr10	-	2394	6	FSM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	11.7881296226331	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCAGTCCCCTGGCTTTC	NA	False	NA	-7	True	AATAAA	-26	NA	77351619	77322494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679_77339749_77350139_77350249_77351436
ENSMUST00000045542.13	chr4	+	3033	11	FSM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	8.01810451416044	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAAATATGATTTTGC	NA	False	NA	3	True	ATTAAA	-16	NA	116578144	116661439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
ENSMUST00000045602.9	chr17	-	732	4	FSM	ENSMUSG00000040048.15	ENSMUST00000045602.9	732	4	0	0	0	0	multi-exon	FALSE	canonical	3	2001	junction_1	127.206743357243	9977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTCTGGTGACTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	24943452	24941033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24941195_24941354_24941495_24941628_24941768_24943160
ENSMUST00000045604.4	chr2	-	776	2	FSM	ENSMUSG00000036850.5	ENSMUST00000045604.4	776	2	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	0	1842	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTTTTGAATCAAGT	NA	False	NA	-3	True	ATTAAA	-21	NA	24865110	24864128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_24864694_24864899
ENSMUST00000045607.12	chr4	+	2955	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	0	0	0	0	multi-exon	FALSE	canonical	2	288	junction_12	49.6985375708199	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATAGCACTGTTTCT	NA	False	NA	NA	False	ATTAAA	-11	NA	44300875	44364675	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUST00000045628.15	chr10	-	1898	8	FSM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_7	14.1608831731957	338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCCCCGTGTTTGTC	9682	False	NA	-8	True	AATAAA	-15	NA	79752840	79745885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749546_79752656
ENSMUST00000045633.6	chr11	+	4358	26	FSM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	0	0	0	0	multi-exon	FALSE	canonical	3	2354	junction_12	204.057066527969	5454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACACTTGGACCTGGTTC	NA	False	NA	19	True	AATAAA	-32	NA	72332180	72342594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ENSMUST00000045693.8	chr6	+	2486	13	FSM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_7	60.725246442938	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACAATGCCTTGTGGGG	NA	False	NA	28	True	AATAAA	-22	NA	85408970	85423417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ENSMUST00000045694.14	chr1	+	1513	2	FSM	ENSMUSG00000041396.14	ENSMUST00000045694.14	1513	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGACTGTTCAATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	163822457	163824812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_163822641_163823482
ENSMUST00000045697.12	chr11	+	940	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	41.3467720088952	2655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACAGCTTCAGACCTCT	NA	False	NA	1	True	NA	NA	NA	59093317	59096960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
ENSMUST00000045699.8	chr2	+	4690	17	FSM	ENSMUSG00000040506.17	ENSMUST00000045699.8	4690	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	31.3866387775117	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91596789	91749194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ENSMUST00000045705.14	chr2	+	5203	18	FSM	ENSMUSG00000040506.17	ENSMUST00000045705.14	5203	18	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	14.4832560525026	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91560569	91749194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ENSMUST00000045730.7	chr10	+	6195	4	FSM	ENSMUSG00000038587.11	ENSMUST00000045730.7	6195	4	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_2	280.358104335628	2078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTTTTTTTATTAA	NA	False	NA	23	True	AATAAA	-19	NA	4216379	4309470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_4216669_4263742_4263858_4303141_4307940_4308477
ENSMUST00000045737.14	chr5	+	2552	12	FSM	ENSMUSG00000038072.15	ENSMUST00000045737.14	2552	12	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_8	26.0711042984152	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGACTCTTCTATCTCT	NA	False	NA	13	True	AATAAA	-27	NA	25427879	25470916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_25428030_25452451_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
ENSMUST00000045748.7	chrX	-	2115	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACCTTGGTTTGAAAGA	NA	False	NA	-2	True	ATTAAA	-33	NA	92875807	92808212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
ENSMUST00000045756.14	chr3	+	685	3	FSM	ENSMUSG00000041959.15	ENSMUST00000045756.14	685	3	0	0	0	0	multi-exon	TRUE	canonical	3	427	junction_2	41.5	3949	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGACGTAGAGTGTTTC	NA	False	NA	20	True	AATAAA	-24	NA	93462386	93471950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_93462519_93468250_93468403_93471549
ENSMUST00000045766.8	chr15	-	2126	18	FSM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	88.3053055575902	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGATTTTGTCCTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	8128675	7902542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108849_8111945_8112067_8123159_8123244_8128439_8128506_8128602
ENSMUST00000045779.6	chr11	+	3486	14	FSM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_11	15.0937896237857	443	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGCAGCTGAGTCACTT	NA	False	NA	11	True	AATAAA	-14	NA	114566256	114611803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ENSMUST00000045788.9	chr13	-	1933	9	FSM	ENSMUSG00000015937.16	ENSMUST00000045788.9	1933	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	524.81126071665	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGGCCGTGTTTTGTGT	6006	False	NA	-8	True	AGTAAA	-15	NA	56283343	56221434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_56222206_56230932_56231108_56232008_56232099_56236064_56236156_56243936_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ENSMUST00000045791.11	chr9	+	2340	9	FSM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_4	15.3927742788621	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGCCCTGATGTCAAT	NA	False	NA	13	True	AATAAA	-15	NA	57468225	57496078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
ENSMUST00000045802.7	chr9	+	2188	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	0	0	0	0	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	2936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAAAATCTCTTGTCAT	NA	False	NA	NA	False	ATTAAA	-16	NA	65797518	65810548	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
ENSMUST00000045807.14	chr11	+	3389	15	FSM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_8	75.3882467968452	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTCTGGATTCTAGTA	NA	False	NA	26	True	AATAAA	-18	NA	74788903	74800168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ENSMUST00000045827.5	chr13	-	3692	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGGTGAGGCTTTGTG	NA	False	NA	NA	False	ATTAAA	-25	NA	68730240	68708898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ENSMUST00000045855.9	chr6	-	1058	4	FSM	ENSMUSG00000042770.9	ENSMUST00000045855.9	1058	4	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	18.8738502225228	3342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGACAGTTTTAAATTATT	NA	False	NA	-29	True	AATACA	-20	NA	135145213	135114519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_135115062_135129818_135130000_135132148_135132288_135145017
ENSMUST00000045866.9	chr10	-	4722	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_14	69.0087246776279	2422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTTCTTGGTGGCTTTT	NA	False	NA	-5	True	AATAAA	-18	NA	62438060	62416029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ENSMUST00000045876.8	chr1	-	3179	24	FSM	ENSMUSG00000041406.15	ENSMUST00000045876.8	3179	24	0	0	0	0	multi-exon	TRUE	canonical	2	170	junction_8	40.7878461455702	489	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGCTTACCAGCTTGAA	NA	False	NA	NA	False	AATAGA	-29	NA	163822365	163781322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ENSMUST00000045884.17	chr8	-	2078	12	FSM	ENSMUSG00000040263.17	ENSMUST00000045884.17	2078	12	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_5	29.2453287927892	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCAAGATGACAATGTGC	436	False	NA	-5	True	AATAAA	-37	NA	122556308	122523051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122526396_122527877_122527954_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548018_122548098_122548520_122548613_122556120
ENSMUST00000045887.9	chr10	-	1084	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	0	0	0	0	multi-exon	FALSE	canonical	3	1606	junction_1	82	6834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGCTCTGTAACGG	1253	False	NA	7	True	AATAAA	-27	NA	71180784	71166309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_71166957_71172043_71172250_71180553
ENSMUST00000045897.15	chr1	+	1216	5	FSM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	0	0	0	0	multi-exon	FALSE	canonical	3	19621	junction_2	1755.19477195552	101969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTTCTGTGTGTA	NA	False	NA	57	True	NA	NA	NA	86454447	86458434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686
ENSMUST00000045905.15	chr14	-	3293	15	FSM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_11	31.8875575504085	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTTTTGTACTTCTG	NA	False	NA	-5	True	AATAAA	-20	NA	45767575	45696251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881_45767049_45767390
ENSMUST00000045909.8	chr13	+	1894	2	FSM	ENSMUSG00000041995.9	ENSMUST00000045909.8	1894	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGTGTTCTGCTTGCATG	NA	False	NA	38	True	NA	NA	NA	95461744	95474349	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_95461853_95472563
ENSMUST00000045918.15	chr16	-	1451	9	FSM	ENSMUSG00000033809.16	ENSMUST00000045918.15	1451	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	107.475578621378	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTGGTTGCTCGTGCCT	NA	False	NA	13	True	AATAAA	-36	NA	20429518	20424200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20427736_20427837_20429292
ENSMUST00000045931.12	chr12	+	2597	12	FSM	ENSMUSG00000042472.12	ENSMUST00000045931.12	2597	12	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_3	18.7929123266993	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	1583	False	NA	11	True	AATAAA	-16	NA	84363625	84390497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ENSMUST00000045959.8	chr2	+	1637	15	FSM	ENSMUSG00000038572.8	ENSMUST00000045959.8	1637	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	7.50951777032701	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGAGTTTGCTG	NA	False	NA	5	True	AATAAA	-15	NA	154065661	154082822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_154065814_154066857_154067075_154069010_154069116_154069982_154070115_154070773_154070859_154070950_154071015_154071386_154071473_154072092_154072276_154074753_154074808_154075108_154075259_154076410_154076479_154076607_154076654_154078677_154078742_154080747_154080828_154082671
ENSMUST00000045971.9	chr11	-	2155	11	FSM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_10	6.56429737291052	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTGTCTATTTTTAA	3	True	NA	-2	True	ATTAAA	-24	NA	69686769	69674861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69675588_69675875_69676024_69676532_69676706_69677706_69677931_69683524_69683735_69684290_69684439_69684709_69684819_69684975_69685086_69685794_69685840_69686420_69686561_69686647
ENSMUST00000045976.7	chr14	+	913	2	FSM	ENSMUSG00000071229.4	ENSMUST00000045976.7	913	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTTCTTTGTAACTGA	NA	False	NA	NA	False	AAGAAA	-3	NA	122272085	122275832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_122272425_122275258
ENSMUST00000045986.8	chr6	-	1230	3	FSM	ENSMUSG00000033735.10	ENSMUST00000045986.8	1230	3	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_2	5	1263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGTGTGCGTTGTCCTTC	7982	False	NA	NA	False	AATACA	-21	NA	85114748	85110659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_85111271_85113804_85114096_85114420
ENSMUST00000045993.15	chr5	+	1755	10	FSM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	0	0	0	0	multi-exon	FALSE	canonical	3	1193	junction_9	105.134834062424	4087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGTTCTATTCCTTTT	5273	False	NA	43	True	AATAAA	-45	NA	100666174	100695669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ENSMUST00000046011.12	chr12	+	3021	21	FSM	ENSMUSG00000061458.10	ENSMUST00000046011.12	3021	21	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_7	25.2103153490788	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATTTGTTTAGCTTA	NA	False	NA	14	True	AATAAA	-17	NA	17398458	17480096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ENSMUST00000046022.16	chr17	-	3951	28	FSM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_20	16.8071446039882	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTGGAGTATGGTAACT	5305	False	NA	-23	True	AATAAA	-13	NA	35069186	35058219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ENSMUST00000046030.8	chr2	-	3396	14	FSM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	0	0	0	0	multi-exon	TRUE	canonical	3	379	junction_8	12.585330053057	625	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCGTTTGTATAGCATT	6977	False	NA	-12	True	AATAAA	-16	NA	140012484	139961802	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
ENSMUST00000046114.5	chr10	-	604	3	FSM	ENSMUSG00000034932.5	ENSMUST00000046114.5	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_1	11.5	2796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCATGCCCTGTG	3094	False	NA	0	True	AATAAA	-29	NA	81102768	81100546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_81100832_81101484_81101642_81102606
ENSMUST00000046122.11	chr5	+	2267	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	0	0	0	0	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	14665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGTTCTGTGAAGGGTC	NA	False	NA	35	True	AATAAA	-34	NA	45650715	45670033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ENSMUST00000046149.9	chr2	+	1057	3	FSM	ENSMUSG00000037740.9	ENSMUST00000046149.9	1057	3	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_1	21	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCCCATTTACTGGCT	385	False	NA	14	True	NA	NA	NA	130405661	130407314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_130405911_130406000_130406352_130406857
ENSMUST00000046191.9	chr14	-	2788	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	0	0	0	0	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	3373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATCCATCAGGTAAC	NA	False	NA	NA	False	ATTAAA	-11	NA	45626418	45613790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ENSMUST00000046206.5	chr18	-	4299	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	46.8807589054993	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	24663261	24618016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ENSMUST00000046207.9	chr12	+	1180	4	FSM	ENSMUSG00000037361.9	ENSMUST00000046207.9	1180	4	0	0	0	0	multi-exon	FALSE	canonical	3	1039	junction_3	63.8609600790829	6053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTTTCTCTTGTAA	NA	False	NA	NA	False	NA	NA	NA	4867543	4877659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_4867820_4870593_4870713_4876757_4876897_4877013
ENSMUST00000046244.15	chr17	+	1519	7	FSM	ENSMUSG00000040482.17	ENSMUST00000046244.15	1519	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	48.3439643480847	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAAGCACTCTGGTTTGC	2976	False	NA	77	True	NA	NA	NA	35055994	35058209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35056218_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
ENSMUST00000046246.13	chr13	-	1697	13	FSM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	33.4015967682185	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTCTGTGCCTCCCCGC	NA	False	NA	-7	True	AATAAA	-15	NA	55661259	55646228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
ENSMUST00000046255.14	chr6	-	1610	4	FSM	ENSMUSG00000032641.19	ENSMUST00000046255.14	1610	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	18.9267594221045	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCACTATTGATTATGGT	NA	False	NA	-18	True	ACTAAA	-19	NA	134874821	134846070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_134847446_134864592_134864749_134874124_134874177_134874794
ENSMUST00000046283.16	chr16	-	4237	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	5.78791845139511	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAAGAGAAGG	3981	False	NA	NA	False	NA	NA	NA	75563709	75551909	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
ENSMUST00000046288.16	chr17	+	1582	4	FSM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	1707.19269237216	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTGGTTATTTCCCCTC	NA	False	NA	31	True	AATAAA	-21	NA	31739091	31750305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_31739236_31740542_31740667_31746283_31747376_31750083
ENSMUST00000046306.15	chr7	-	4430	4	FSM	ENSMUSG00000040167.17	ENSMUST00000046306.15	4430	4	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_1	6.97614984548545	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTTGTTTTTTTTTTA	NA	False	NA	-2	True	AATAAA	-17	NA	131012250	130990380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_130994310_130995483_130995667_130998397_130998581_131012115
ENSMUST00000046389.5	chr2	+	1898	10	FSM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	22.7991769398766	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGACTTATTTATATGAA	NA	False	NA	55	True	AATAAA	-21	NA	76200327	76214112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
ENSMUST00000046399.7	chr2	-	2235	9	FSM	ENSMUSG00000033096.8	ENSMUST00000046399.7	2235	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_7	10.0054672554559	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCTGATTATTACT	999	False	NA	NA	False	AATAAA	-15	NA	150450487	150424999	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150442163_150442281_150450307
ENSMUST00000046404.8	chr12	+	3261	11	FSM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_2	45.0115540722602	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCTGATTGTTCT	NA	False	NA	33	True	ATTAAA	-14	NA	102724225	102743966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ENSMUST00000046497.8	chr17	-	1190	4	Antisense	novelGene_ENSMUSG00000040658.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTCTTCCCGAGCCAACC	1812	False	NA	NA	False	NA	NA	NA	46810550	46807636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr17_-_46807899_46809350_46809420_46809568_46809680_46809802
ENSMUST00000046514.13	chr1	+	4906	32	FSM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	0	0	0	0	multi-exon	FALSE	canonical	3	1945	junction_14	331.30791485156	2320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTGGTTCATCCTGCA	NA	False	NA	22	True	AATAAA	-24	NA	185095240	185160557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ENSMUST00000046515.15	chr3	+	4480	5	FSM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	11.2333209693305	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTCTGGCCCTTCCC	5568	False	NA	10	True	AATAAA	-17	NA	27237113	27299107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349
ENSMUST00000046520.13	chr6	-	2694	4	FSM	ENSMUSG00000038074.17	ENSMUST00000046520.13	2694	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	2.16024689946929	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTGTACATGTGCATA	NA	False	NA	0	True	AATAAA	-19	NA	54570162	54554588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_54556672_54562787_54562916_54566257_54566410_54569831
ENSMUST00000046532.4	chr4	-	1880	2	FSM	ENSMUSG00000042367.13	ENSMUST00000046532.4	1880	2	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_1	0	4607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	False	NA	-5	True	AATAAA	-17	NA	127224637	127219027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_127220565_127224294
ENSMUST00000046542.13	chr3	+	3062	9	FSM	ENSMUSG00000034544.18	ENSMUST00000046542.13	3062	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	112.554153632818	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACACTGTGACTGCTT	NA	False	NA	10	True	AATAAA	-10	NA	66893035	67265723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_66893140_66901849_66902046_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ENSMUST00000046549.5	chr17	-	1420	3	FSM	ENSMUSG00000040694.5	ENSMUST00000046549.5	1420	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	11.5	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGCCTGTTCTCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	48739958	48726258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_48726662_48729968_48730534_48739506
ENSMUST00000046558.8	chr4	+	608	6	FSM	ENSMUSG00000063172.14	ENSMUST00000046558.8	608	6	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	99.534114754691	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTCTGATTCCATTTT	NA	False	NA	-2	True	ATTAAA	-9	NA	107111121	107137125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_107111193_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ENSMUST00000046571.14	chr2	+	3959	22	FSM	ENSMUSG00000026790.20	ENSMUST00000046571.14	3959	22	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	346.4391129144	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7303	False	NA	14	True	AATAAA	-14	NA	29779906	29821758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29779934_29780782_29781015_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ENSMUST00000046587.8	chr9	-	3225	7	FSM	ENSMUSG00000040722.8	ENSMUST00000046587.8	3225	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	41.0680329859288	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375341	57348609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375215
ENSMUST00000046603.15	chr5	-	4453	28	FSM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_10	27.4864725426801	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGCTTGTAAAGCAC	NA	False	NA	-28	True	ATTAAA	-23	NA	108777605	108717279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ENSMUST00000046633.10	chr15	-	5076	6	FSM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_4	35.1681674245332	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTACTTTCTTTT	2180	False	NA	-10	True	AATAAA	-20	NA	4025226	4011516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ENSMUST00000046638.10	chr10	-	2033	12	FSM	ENSMUSG00000036009.17	ENSMUST00000046638.10	2033	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_11	25.2121576340063	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCAATGTTCTTGAGTG	NA	False	NA	NA	False	AATAAA	-22	NA	105677239	105599049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105676936
ENSMUST00000046644.7	chr13	+	559	4	FSM	ENSMUSG00000042043.7	ENSMUST00000046644.7	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	1242	junction_3	49.6185449202211	15224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAATTTTCAGTTGGCCA	NA	False	NA	37	True	AATAAA	-37	NA	94925417	94979430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_94925511_94968867_94968974_94973615_94973703_94979157
ENSMUST00000046651.7	chr17	+	1135	6	FSM	ENSMUSG00000040771.15	ENSMUST00000046651.7	1135	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	381.26547181721	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGAACGTCTGTGTTC	NA	False	NA	21	True	AATAAA	-29	NA	48717107	48724294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_48717266_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
ENSMUST00000046675.12	chr4	-	2639	5	FSM	ENSMUSG00000040795.13	ENSMUST00000046675.12	2639	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	14.396180048888	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGTACAAATATATGTA	NA	False	NA	NA	False	NA	NA	NA	129512892	129508918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
ENSMUST00000046709.9	chr14	-	4673	26	FSM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	0	0	0	0	multi-exon	FALSE	canonical	3	979	junction_21	82.6076606617086	1473	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTTATGACCATTT	NA	False	NA	-1	True	AATAAA	-40	NA	52434873	52397870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ENSMUST00000046735.11	chr9	-	1391	6	FSM	ENSMUSG00000040813.17	ENSMUST00000046735.11	1391	6	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_5	67.9187750183997	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGAGTTGGTTTT	7880	False	NA	-6	True	AATAAA	-22	NA	106563114	106535950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106563033
ENSMUST00000046743.11	chr1	+	1618	10	FSM	ENSMUSG00000033488.12	ENSMUST00000046743.11	1618	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	9.08125188520113	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	157286149	157316630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157294735_157294818_157298185_157298368_157299757_157299987_157316012
ENSMUST00000046748.13	chr3	+	1977	4	FSM	ENSMUSG00000037661.15	ENSMUST00000046748.13	1977	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	83.6341238171756	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910137	30951339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_30910207_30931383_30931711_30944090_30944191_30949858
ENSMUST00000046765.10	chr8	+	2235	3	FSM	ENSMUSG00000033998.10	ENSMUST00000046765.10	2235	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	9	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGGTTTATTACAACT	NA	False	NA	21	True	AATAAA	-18	NA	126721908	126757424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_126722554_126751750_126752147_126756230
ENSMUST00000046769.16	chr2	+	6511	43	FSM	ENSMUSG00000040549.17	ENSMUST00000046769.16	6511	43	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_41	104.161003927713	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCATTTCCCAAAATGC	NA	False	NA	9	True	AATAAA	-14	NA	91376666	91451007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450095_91450185_91450326
ENSMUST00000046831.11	chr9	-	785	4	FSM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	45.9879211194514	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCATGGTCATTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	21838758	21832304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838587
ENSMUST00000046863.12	chr7	+	1828	7	FSM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_6	10.2794292967395	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTACCTTTTACCCA	1884	False	NA	14	True	AATAAA	-15	NA	127399775	127402974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
ENSMUST00000046890.12	chr7	+	1525	6	FSM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	0	0	0	0	multi-exon	TRUE	canonical	3	288	junction_1	23.1395764870492	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795772	140798571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
ENSMUST00000046901.14	chr5	-	1543	7	FSM	ENSMUSG00000025856.16	ENSMUST00000046901.14	1543	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	166.22140522675	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCTTGGATGACATTT	NA	False	NA	NA	False	NA	NA	NA	138980708	138962270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_138962983_138964376_138964446_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
ENSMUST00000046908.10	chr2	-	1620	4	FSM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	31.0268700752536	851	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATTGTGTGTTGTTTCTT	NA	False	NA	-4	True	NA	NA	NA	163261448	163247741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_163249010_163253316_163253431_163257454_163257576_163261331
ENSMUST00000046916.9	chr8	-	2593	9	FSM	ENSMUSG00000037725.9	ENSMUST00000046916.9	2593	9	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_6	17.1973835219198	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAAACAAATGAGAGTTA	NA	False	NA	NA	False	NA	NA	NA	22675835	22658175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
ENSMUST00000046951.10	chr13	+	1722	10	FSM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_5	43.1108247413169	2842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCTTAATTACATTTAT	NA	False	NA	NA	False	AGTAAA	-28	NA	41154498	41166491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
ENSMUST00000046955.7	chr11	+	2002	8	FSM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	21.86601127274	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTGGAGGCGTTGA	2471	False	NA	8	True	AATAAA	-10	NA	17161917	17183796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
ENSMUST00000046983.10	chr7	+	2412	6	FSM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	5.53534100123922	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTCCTATTTCTTCTTCC	NA	False	NA	11	True	AATAAA	-21	NA	105203566	105207596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_105204045_105204428_105205202_105205713_105205886_105206124_105206202_105206556_105206703_105206830
ENSMUST00000047028.9	chr11	-	3362	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCTGGGTTATTACAT	NA	False	NA	-3	True	AATAAA	-17	NA	20781056	20773575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
ENSMUST00000047057.9	chr19	+	1353	6	FSM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_3	22.5601418435257	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATGGTAGCATGTTTCC	3692	False	NA	NA	False	ATTAAA	-19	NA	45549053	45566726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_45549147_45553349_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
ENSMUST00000047086.10	chr17	+	3450	18	FSM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_7	117.232918130641	2202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGTCTCGTGGTGTATA	NA	False	NA	18	True	AATAAA	-18	NA	71923209	71966026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ENSMUST00000047091.14	chr7	-	2581	11	FSM	ENSMUSG00000038187.15	ENSMUST00000047091.14	2581	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_8	39.4138300600183	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACCTTGGCTAGATTC	NA	False	NA	1	True	AATAAA	-34	NA	112968546	112914832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112950987_112951146_112964111_112964177_112968078_112968166_112968405
ENSMUST00000047131.16	chr14	-	3846	30	FSM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	76.4571487859417	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCCAGTGAGGCAGGAT	9745	False	NA	NA	False	AAAAAG	-5	NA	55873141	55862856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ENSMUST00000047173.10	chr9	+	2731	2	FSM	ENSMUSG00000041124.12	ENSMUST00000047173.10	2731	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAAATTTTCCTGTCT	13	False	NA	5	True	ATTAAA	-13	NA	4383534	4386861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_4384143_4384738
ENSMUST00000047177.4	chr2	+	956	2	FSM	ENSMUSG00000036992.11	ENSMUST00000047177.4	956	2	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_1	0	1797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTCTAAATCTTGAGA	NA	False	NA	15	True	AATAAA	-19	NA	148514545	148517947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_148514756_148517201
ENSMUST00000047218.5	chr14	+	1565	8	FSM	ENSMUSG00000033589.5	ENSMUST00000047218.5	1565	8	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_3	37.0515360886781	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTCTTCACATCTC	6567	False	NA	30	True	AATAAA	-26	NA	70782793	70786373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_70783179_70783916_70783990_70784369_70784447_70784554_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
ENSMUST00000047273.3	chr17	+	1745	6	FSM	ENSMUSG00000041199.4	ENSMUST00000047273.3	1745	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	16.0299719276111	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGACCATGAGCATATCT	NA	False	NA	24	True	AATAAA	-21	NA	25946690	25950438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25946822_25947176_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
ENSMUST00000047281.10	chr8	+	902	3	FSM	ENSMUSG00000041203.10	ENSMUST00000047281.10	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	920	junction_1	163	1113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	False	NA	21	True	AGTAAA	-21	NA	85753451	85756915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85753864_85756167_85756246_85756503
ENSMUST00000047285.7	chr3	+	2799	10	FSM	ENSMUSG00000032952.12	ENSMUST00000047285.7	2799	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	8.73053390247253	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCTGTCGTCACTT	NA	False	NA	17	True	ATTAAA	-21	NA	103716943	103729341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
ENSMUST00000047322.8	chr18	+	3209	19	FSM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	21.3625378803961	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACTAAAATGTGGATG	3291	False	NA	9	True	ATTAAA	-31	NA	11790485	11875935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ENSMUST00000047349.8	chr9	+	4133	24	FSM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_8	78.9995812484415	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896764	48953810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ENSMUST00000047356.11	chr7	-	1816	3	FSM	ENSMUSG00000038539.16	ENSMUST00000047356.11	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	35.5	577	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTCTTATCTTTGA	9686	False	NA	0	True	AATAAA	-19	NA	44466082	44461679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44462945_44464412_44464707_44465825
ENSMUST00000047363.14	chr13	+	4396	34	FSM	ENSMUSG00000037851.14	ENSMUST00000047363.14	4396	34	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	328.385946197822	1981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAAGTAGTTATTCTC	NA	False	NA	30	True	ATTAAA	-31	NA	49835605	49887743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865312_49868288_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ENSMUST00000047368.8	chr3	-	875	8	FSM	ENSMUSG00000033752.8	ENSMUST00000047368.8	875	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	22.7497476998793	2237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	84063093	83995239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_83995482_84000861_84000907_84012241_84012357_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84062968
ENSMUST00000047419.8	chr15	+	837	4	FSM	ENSMUSG00000041736.8	ENSMUST00000047419.8	837	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	54.5119762580257	1150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTCTGTACTTAGTGGA	NA	False	NA	21	True	AATAAA	-21	NA	83447792	83458404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_83447846_83455585_83455797_83456400_83456540_83457970
ENSMUST00000047429.9	chr16	+	846	3	FSM	ENSMUSG00000039680.11	ENSMUST00000047429.9	846	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	10.5	2754	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACGGCTGTATTGCTTCT	6285	False	NA	5	True	AATAAA	-17	NA	91855157	91909115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_91855369_91896481_91896622_91908620
ENSMUST00000047502.9	chr3	+	3394	7	FSM	ENSMUSG00000037730.14	ENSMUST00000047502.9	3394	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	66.6243615770955	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATCTGTGTGTATGTT	8785	False	NA	NA	False	AATAAA	-20	NA	30656785	30672517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
ENSMUST00000047510.10	chr6	-	3213	20	FSM	ENSMUSG00000038429.11	ENSMUST00000047510.10	3213	20	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	195.368477767687	1659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCAGTTCTTTGGGG	7856	False	NA	-8	True	AATAAA	-15	NA	124806447	124791981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ENSMUST00000047521.7	chr2	+	2715	12	FSM	ENSMUSG00000039787.14	ENSMUST00000047521.7	2715	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	4.78288961380578	322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACAGCTGAGCCTCTTT	NA	False	NA	19	True	AATAAA	-30	NA	29759505	29772852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29759738_29761034_29761146_29761286_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
ENSMUST00000047531.16	chr6	+	1562	4	FSM	ENSMUSG00000039958.18	ENSMUST00000047531.16	1562	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	11.6141675934562	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAACTCAAGTGTTATC	NA	False	NA	NA	False	NA	NA	NA	149043010	149052669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_149043203_149045531_149045941_149048655_149048787_149051839
ENSMUST00000047577.7	chr1	-	2564	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	1454	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAACACTTATGCTAC	NA	False	NA	-58	True	AATAAA	-10	NA	13197387	13183680	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
ENSMUST00000047611.4	chr17	+	1079	6	FSM	ENSMUSG00000041429.4	ENSMUST00000047611.4	1079	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	26.3772629360971	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGGCCCGTTGGCTT	908	False	NA	11	True	AATAAA	-23	NA	24851655	24857811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24851829_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
ENSMUST00000047615.15	chr1	+	3059	17	FSM	ENSMUSG00000039354.17	ENSMUST00000047615.15	3059	17	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_6	11.1563813017483	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTATTCCGTTTGTCAC	NA	False	NA	9	True	AATAAA	-16	NA	72622409	72672293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_72622598_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ENSMUST00000047616.10	chr11	-	1668	6	FSM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_2	32.356761271796	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734275	116728257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157_116733547_116733890
ENSMUST00000047620.3	chr4	+	1923	8	FSM	ENSMUSG00000034871.3	ENSMUST00000047620.3	1923	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.64189171555813	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCACTGTGTAAGACCTGGG	2113	False	NA	4	True	NA	NA	NA	106591085	106605489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_106591286_106592646_106592794_106599341_106599495_106600393_106600554_106602669_106602895_106603252_106603393_106604169_106604314_106604735
ENSMUST00000047627.14	chr13	-	3694	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	1605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTCTTTGTAGTG	NA	False	NA	-4	True	AATAAA	-15	NA	111626645	111562213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ENSMUST00000047629.7	chr8	+	2232	17	FSM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	0	0	0	0	multi-exon	TRUE	canonical	3	1046	junction_1	100.936996902771	2637	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTAGACATTTTAAATTA	NA	False	NA	12	True	AATAAA	-17	NA	107620282	107649720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ENSMUST00000047652.6	chr14	-	2475	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	0	0	0	0	multi-exon	TRUE	canonical	3	610	junction_1	26.6868413267663	1701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGGTGATAAATTGAGC	NA	False	NA	49	True	ATTAAA	-18	NA	40688764	40628401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
ENSMUST00000047672.9	chr10	-	1959	16	FSM	ENSMUSG00000034024.9	ENSMUST00000047672.9	1959	16	0	0	0	0	multi-exon	FALSE	canonical	3	1936	junction_8	229.468312990414	10454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	116899719	116886905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ENSMUST00000047689.11	chr11	-	2961	3	FSM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_2	109.5	1823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTGTAGTCTGTTTG	NA	False	NA	79	True	TTTAAA	-38	NA	11758959	11750287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_11753064_11756095_11756216_11758894
ENSMUST00000047721.10	chr9	+	1586	15	FSM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	0	0	0	0	multi-exon	FALSE	canonical	3	1203	junction_11	74.9465115388084	2384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTGTTCCTCTGGTTT	NA	False	NA	23	True	ATTAAA	-23	NA	106354467	106362623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ENSMUST00000047749.7	chr8	-	1587	4	FSM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	19.3045763140937	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCATACCAGTGTGG	NA	False	NA	94	True	ATTAAA	-21	NA	86159462	86135387	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_86136520_86138741_86138925_86153488_86153586_86159287
ENSMUST00000047799.13	chr9	+	3444	20	FSM	ENSMUSG00000090150.11	ENSMUST00000047799.13	3444	20	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	6.62112793865633	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATTTTCAGTCCTAAA	NA	False	NA	92	True	NA	NA	NA	103940884	104004924	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_103941103_103950820_103950921_103953015_103953142_103953528_103953691_103955761_103955927_103958429_103958572_103958896_103959019_103959989_103960097_103961359_103961487_103967456_103967535_103968790_103968930_103972719_103972828_103974552_103974652_103990660_103990728_103991651_103991738_103992476_103992549_103993363_103993519_104000245_104000363_104001216_104001327_104003780
ENSMUST00000047815.13	chr2	+	4521	17	FSM	ENSMUSG00000039463.15	ENSMUST00000047815.13	4521	17	0	0	0	0	multi-exon	TRUE	non_canonical	2	49	junction_9	20.9574531790005	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTGTGTCACGTGTT	NA	False	NA	7	True	AATAAA	-20	NA	167263631	167318920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ENSMUST00000047816.15	chr15	-	2963	16	FSM	ENSMUSG00000042632.18	ENSMUST00000047816.15	2963	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	63.160817671155	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212428	79170427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212288
ENSMUST00000047857.16	chr5	-	2858	11	FSM	ENSMUSG00000039753.17	ENSMUST00000047857.16	2858	11	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_3	32.2155242080584	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTGTTGTGATTT	8828	False	NA	-1	True	AATAAA	-28	NA	43939492	43901957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ENSMUST00000047864.11	chr10	-	3089	14	Antisense	novelGene_ENSMUSG00000064441.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	36968	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTTTTATAGGTCG	7862	False	NA	NA	False	NA	NA	NA	81018332	81012464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr10_-_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ENSMUST00000047885.14	chr10	-	2743	12	FSM	ENSMUSG00000039480.15	ENSMUST00000047885.14	2743	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	12.7305190664984	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	False	NA	-1	True	AATAAA	-17	NA	34294548	34179604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ENSMUST00000047899.13	chr14	+	1623	14	FSM	ENSMUSG00000004561.15	ENSMUST00000047899.13	1623	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	48.1261901412816	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGATGTTCTGATTGC	NA	False	NA	NA	False	AATAAA	-16	NA	52122298	52129325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ENSMUST00000047910.15	chr10	-	4424	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	0	0	0	0	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	6937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGAGTGAAAGACCAGT	NA	False	NA	-14	True	AATAAA	-23	NA	93725676	93694350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ENSMUST00000047947.9	chr9	+	1429	10	FSM	ENSMUSG00000070284.11	ENSMUST00000047947.9	1429	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	31.8309578326385	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGACTGGAAGTCAAGC	NA	False	NA	29	True	NA	NA	NA	107926523	107928901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107926620_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ENSMUST00000047951.9	chr4	+	1288	6	FSM	ENSMUSG00000041556.9	ENSMUST00000047951.9	1288	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	6.34350061086148	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCACAGATGAATGGACATC	NA	False	NA	23	True	NA	NA	NA	148245077	148250881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_148245169_148248531_148248913_148249282_148249413_148249484_148249581_148250100_148250231_148250421
ENSMUST00000047978.9	chr1	+	2861	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	0	1340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTGGCGAGATGGCTCA	6638	False	NA	NA	False	ATTAAA	-13	NA	134422385	134436512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_134422548_134433813
ENSMUST00000048015.14	chr7	-	4333	4	FSM	ENSMUSG00000012640.17	ENSMUST00000048015.14	4333	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	3.29983164553722	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	0	True	AATAAA	-16	NA	42960910	42945946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454
ENSMUST00000048028.15	chr5	+	4211	34	FSM	ENSMUSG00000036928.15	ENSMUST00000048028.15	4211	34	0	0	0	0	multi-exon	FALSE	canonical	2	72	junction_1	21.1857845161499	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGACTTGAGATTGTCA	NA	False	NA	20	True	AATAAA	-20	NA	138278787	138310655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ENSMUST00000048054.14	chr17	-	3214	22	FSM	ENSMUSG00000019214.15	ENSMUST00000048054.14	3214	22	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_21	100.708127696462	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTGGGGAGTGTCAGT	5674	False	NA	NA	False	NA	NA	NA	25946393	25937899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ENSMUST00000048073.9	chr11	+	2501	12	FSM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_10	36.2694234084327	1050	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCATAACTCGTTCTTGT	NA	False	NA	28	True	NA	NA	NA	78219240	78233608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
ENSMUST00000048079.14	chr7	-	3443	12	FSM	ENSMUSG00000044465.20	ENSMUST00000048079.14	3443	12	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_4	97.8877751760945	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105049209	105027817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ENSMUST00000048138.8	chr3	+	715	4	FSM	ENSMUSG00000042312.11	ENSMUST00000048138.8	715	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	161.897772958398	3571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTATTTATTTATTTA	NA	False	NA	15	True	AATAAA	-20	NA	90421741	90431888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_90421773_90422064_90422327_90423156_90423350_90431659
ENSMUST00000048139.12	chr11	-	1891	10	FSM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_6	29.7960143162773	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTCATTGTGTCTGTT	NA	False	NA	-4	True	TATAAA	-15	NA	69470150	69452584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
ENSMUST00000048162.10	chr4	+	2823	11	FSM	ENSMUSG00000040859.15	ENSMUST00000048162.10	2823	11	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	13.6088206689632	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGAAGTGTCCGGGGATGT	NA	False	NA	64	True	ATTAAA	-15	NA	129355373	129382291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129355499_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ENSMUST00000048192.9	chr18	-	1003	9	FSM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	0	0	0	0	multi-exon	FALSE	canonical	3	1190	junction_6	88.5180066427165	3607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGTTATCTGTTGCT	NA	False	NA	-1	True	AATACA	-19	NA	77855480	77845267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ENSMUST00000048209.16	chr7	+	1588	8	FSM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	0	0	0	0	multi-exon	FALSE	canonical	3	6684	junction_1	674.726490316405	26039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495262	46505051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ENSMUST00000048223.14	chr10	+	1625	11	FSM	ENSMUSG00000035027.19	ENSMUST00000048223.14	1625	11	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_4	210.275652418439	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAATGAAGAAAGAGA	1157	False	NA	-25	True	NA	NA	NA	80941805	80959679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954810_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
ENSMUST00000048249.8	chr17	+	528	4	FSM	ENSMUSG00000041881.14	ENSMUST00000048249.8	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	7458	junction_2	513.174650798558	25773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTTTCTTAGTATTTA	4074	False	NA	33	True	AATATA	-24	NA	34043545	34057291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34043655_34044574_34044625_34048640_34048791_34057072
ENSMUST00000048274.11	chr4	-	1804	16	FSM	ENSMUSG00000038172.15	ENSMUST00000048274.11	1804	16	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_7	23.0820757780192	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAATTCAATTTTCCAT	NA	False	NA	NA	False	AATAAA	-22	NA	83242476	83158046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ENSMUST00000048319.6	chr12	-	4036	12	FSM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_11	24.5928834697229	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCCATCGTATGGATC	NA	False	NA	NA	False	TTTAAA	-3	NA	83643996	83593622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
ENSMUST00000048363.10	chr5	-	1333	6	FSM	ENSMUSG00000035505.15	ENSMUST00000048363.10	1333	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_3	53.4714877294432	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGTGAGATAATTTC	NA	False	NA	-4	True	AATAAA	-16	NA	90371860	90362582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_90363035_90365375_90365484_90366770_90366893_90367218_90367383_90370089_90370191_90371474
ENSMUST00000048391.15	chr4	+	5027	26	FSM	ENSMUSG00000042489.16	ENSMUST00000048391.15	5027	26	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	26.925794324402	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTCCAGCTCTAGTG	NA	False	NA	30	True	AATAAA	-23	NA	126450727	126487696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467102_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
ENSMUST00000048393.8	chr15	-	1270	3	Antisense	novelGene_ENSMUSG00000037204.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1728	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTTCGGAGGGTGGAAC	NA	False	NA	NA	False	NA	NA	NA	101188826	101182152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr15_-_101182427_101184813_101185132_101188148
ENSMUST00000048402.12	chr12	+	2052	12	FSM	ENSMUSG00000021007.15	ENSMUST00000048402.12	2052	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	12.115149999242	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACATATTTATTATTGC	NA	False	NA	17	True	NA	NA	NA	98594415	98636074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_98594594_98598221_98598297_98600482_98600579_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ENSMUST00000048493.12	chr2	-	4744	25	FSM	ENSMUSG00000034032.16	ENSMUST00000048493.12	4744	25	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_24	70.0848691865005	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGACTGTTTTGTCACA	464	False	NA	-2	True	AATAAA	-20	NA	119618018	119594440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ENSMUST00000048518.16	chr10	-	3594	11	FSM	ENSMUSG00000035365.16	ENSMUST00000048518.16	3594	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	14.3666279968544	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTGGTTTATACTT	NA	False	NA	-11	True	ATTAAA	-13	NA	87982803	87927293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357
ENSMUST00000048568.6	chr9	-	1025	2	FSM	ENSMUSG00000042106.6	ENSMUST00000048568.6	1025	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGTCCCATACTCCTG	9756	False	NA	NA	False	AATAAA	-17	NA	107863078	107861421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107862264_107862895
ENSMUST00000048578.3	chr11	-	1438	8	FSM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_5	59.12318513416	2282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGGGGACTATGTTGT	NA	False	NA	-10	True	AATAAA	-12	NA	43638809	43620835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
ENSMUST00000048642.15	chr16	-	1348	10	FSM	ENSMUSG00000033918.17	ENSMUST00000048642.15	1348	10	0	0	0	0	multi-exon	FALSE	canonical	3	1528	junction_6	107.954723019524	3162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	False	NA	-16	True	AATAAA	-24	NA	20121137	20098569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120958
ENSMUST00000048657.10	chr14	+	4461	23	FSM	ENSMUSG00000039367.12	ENSMUST00000048657.10	4461	23	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_9	29.806850674089	458	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTCATTACTCGCGAC	NA	False	NA	15	True	AATAAA	-18	NA	20724375	20744920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ENSMUST00000048670.10	chr9	+	2558	8	FSM	ENSMUSG00000042195.10	ENSMUST00000048670.10	2558	8	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	9.10931346681706	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTAGAATCACAATGT	NA	False	NA	39	True	ATTAAA	-15	NA	53678821	53725438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_53679179_53705121_53705298_53708294_53708423_53713901_53714062_53715329_53715487_53716969_53717023_53718158_53718314_53724066
ENSMUST00000048677.9	chr17	+	3595	13	FSM	ENSMUSG00000042203.9	ENSMUST00000048677.9	3595	13	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_11	15.481844205391	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGGGCTTTGGTTTCCTG	NA	False	NA	11	True	AATAAA	-17	NA	29768758	29825869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
ENSMUST00000048685.13	chr9	-	1256	7	FSM	ENSMUSG00000042210.18	ENSMUST00000048685.13	1256	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	104.56165113888	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTTGTGTTTCCTGAC	NA	False	NA	1	True	AATAAA	-28	NA	106324877	106317249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322851_106322969_106323029_106324729
ENSMUST00000048687.11	chrX	+	1019	3	FSM	ENSMUSG00000042712.11	ENSMUST00000048687.11	1019	3	0	0	0	0	multi-exon	FALSE	canonical	3	2732	junction_2	36	12536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAACAGCCCATCAATTTA	NA	False	NA	8	True	AATAAA	-24	NA	135145827	135147888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_135145977_135146449_135146516_135147084
ENSMUST00000048688.8	chr18	-	4254	22	FSM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_21	37.2590368590547	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCCAGAGCATTTC	NA	False	NA	-48	True	AATAAA	-16	NA	62681766	62637225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ENSMUST00000048698.14	chr5	-	2304	15	FSM	ENSMUSG00000036980.14	ENSMUST00000048698.14	2304	15	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_14	100.146932869985	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1952	False	NA	-4	True	AATAAA	-18	NA	138185488	138176878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ENSMUST00000048706.10	chr4	-	2300	20	FSM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_6	85.9268193438375	1882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	NA	False	NA	-17	True	CATAAA	-21	NA	34614944	34570795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ENSMUST00000048766.15	chr3	+	1122	5	FSM	ENSMUSG00000028102.16	ENSMUST00000048766.15	1122	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	117.48829728956	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTATTCAATTCA	NA	False	NA	9	True	ATTAAA	-16	NA	96542987	96552042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890_96551332_96551751
ENSMUST00000048774.13	chr6	-	3961	24	FSM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_15	22.2825132553629	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGTTGTTATTATGTT	NA	False	NA	-1	True	AATAAA	-16	NA	30873674	30747552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ENSMUST00000048781.4	chr14	+	3400	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	0	0	0	0	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	4391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTTAAAGTTTATTT	8891	False	NA	8	True	NA	NA	NA	55777722	55787474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUST00000048792.5	chr2	-	680	2	FSM	ENSMUSG00000039195.5	ENSMUST00000048792.5	680	2	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	0	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTCTTCTTTGTGCCCA	NA	False	NA	3	True	ATTAAA	-21	NA	32271950	32269112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_32269546_32271703
ENSMUST00000048807.12	chr11	+	3003	3	FSM	ENSMUSG00000040599.14	ENSMUST00000048807.12	3003	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	24	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTATTATTGCTTAAT	NA	False	NA	16	True	AATAAA	-37	NA	70910436	70918197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70911016_70915375_70915538_70915935
ENSMUST00000048898.17	chr8	-	2488	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	0	0	0	0	multi-exon	TRUE	canonical	3	263	junction_13	15.5985130530912	568	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGTAATCATTTTAT	NA	False	NA	38	True	AATAAA	-23	NA	41087819	41004141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
ENSMUST00000048914.8	chr8	+	607	2	FSM	ENSMUSG00000034880.8	ENSMUST00000048914.8	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_1	0	3391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTACGTATGTATTAACT	8920	False	NA	18	True	AATAAA	-18	NA	71917602	71918391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71917712_71917893
ENSMUST00000048937.6	chr9	+	2180	12	FSM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_2	48.4889013457617	969	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCTATGCTTAAGAAAAC	926	False	NA	5	True	AATAAA	-14	NA	75348817	75373714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_75348918_75352516_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356_75365544_75368287_75368386_75373475
ENSMUST00000048946.7	chr13	-	804	6	FSM	ENSMUSG00000037960.12	ENSMUST00000048946.7	804	6	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_5	10.4115320678563	352	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTGTCGAATGTCTT	NA	False	NA	-7	True	ATTAAA	-13	NA	49369502	49356426	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479_49361623_49369412
ENSMUST00000048962.4	chrX	+	4983	30	FSM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	0	0	0	0	multi-exon	TRUE	canonical	3	204	junction_20	20.3345386022518	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGGAGATCCTTCTAT	NA	False	NA	18	True	AATAAA	-22	NA	99669342	99770820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
ENSMUST00000048964.14	chr2	+	2771	17	FSM	ENSMUSG00000039205.17	ENSMUST00000048964.14	2771	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	25.5501192511894	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253209	32268309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_32253311_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ENSMUST00000048993.12	chr13	-	3054	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	24.1119836409624	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGATTTGCAGTGAACA	NA	False	NA	-6	True	AATAAA	-18	NA	81859132	81821961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ENSMUST00000049022.15	chr13	+	1187	4	FSM	ENSMUSG00000037966.16	ENSMUST00000049022.15	1187	4	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_2	21.013223349966	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGGTTCCATGTGCCA	NA	False	NA	13	True	AATAAA	-15	NA	49340960	49349720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_49341114_49347211_49347441_49348369_49348534_49349079
ENSMUST00000049091.9	chr11	-	2915	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	27.1272720502613	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCGTGTGTCCTGTGT	5007	False	NA	-4	True	AATAAA	-14	NA	63970292	63853452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ENSMUST00000049093.8	chr3	+	2795	8	FSM	ENSMUSG00000038393.15	ENSMUST00000049093.8	2795	8	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	94.3746333956929	2463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAATGTTCTTTTCT	NA	False	NA	19	True	AATAAA	-14	NA	96465275	96469173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96465802_96466207_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ENSMUST00000049130.8	chrX	-	903	3	FSM	ENSMUSG00000042750.8	ENSMUST00000049130.8	903	3	0	0	0	0	multi-exon	FALSE	canonical	3	901	junction_2	34	3041	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGTAGTTCTTTAAAGG	4156	False	NA	0	True	AATAAA	-18	NA	134968985	134967312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_134967957_134968348_134968422_134968799
ENSMUST00000049152.15	chr6	+	2480	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCGATTTCTTACTT	NA	False	NA	NA	False	ATTAAA	-24	NA	51500880	51567659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ENSMUST00000049166.5	chr6	-	1516	4	FSM	ENSMUSG00000032757.7	ENSMUST00000049166.5	1516	4	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_1	40.3016404408335	1214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTGTTCTTGGCAT	NA	False	NA	0	True	ATTAAA	-22	NA	4086972	4076898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_4078037_4079960_4080018_4082457_4082583_4086776
ENSMUST00000049169.6	chr9	+	4845	20	FSM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_9	35.0166561080031	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGTCCCTTGTCCTC	NA	False	NA	NA	False	AATAAA	-24	NA	56993864	57035650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ENSMUST00000049206.6	chr14	+	3585	11	FSM	ENSMUSG00000021895.11	ENSMUST00000049206.6	3585	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.4361058794964	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACCTTTTCCTCCTG	NA	False	NA	NA	False	AATAAA	-8	NA	26959995	27125861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_26960111_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ENSMUST00000049207.9	chr16	+	1669	12	FSM	ENSMUSG00000039427.15	ENSMUST00000049207.9	1669	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	58.3112197360631	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGCTCTGAGCCTGTG	1297	False	NA	26	True	AATAAA	-27	NA	5051501	5062776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_5051722_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5062304
ENSMUST00000049245.10	chr8	-	1695	2	FSM	ENSMUSG00000037070.11	ENSMUST00000049245.10	1695	2	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	0	4339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCTTGATTTCTCC	NA	False	NA	NA	False	AGTAAA	-18	NA	79235527	79231897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_79233493_79235427
ENSMUST00000049257.8	chr11	+	3194	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	965	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAATTGTTTTGTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	83832887	83853914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
ENSMUST00000049263.9	chr9	+	3691	21	FSM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_6	54.986612006924	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCTAATGTATTGAGA	NA	False	NA	15	True	AATAAA	-16	NA	70450151	70499514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ENSMUST00000049323.9	chr18	+	1619	7	FSM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_5	28.487814158962	1526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGTGCCAAGCTGGGA	NA	False	NA	4	True	AATAAA	-19	NA	36893272	36896863	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895811_36895901_36896072_36896144
ENSMUST00000049343.15	chr7	-	3454	27	FSM	ENSMUSG00000038644.15	ENSMUST00000049343.15	3454	27	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_26	151.95728923444	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTGTGGTCTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	44198271	44182169	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ENSMUST00000049348.9	chr9	+	2706	15	FSM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	0	0	0	0	multi-exon	TRUE	canonical	3	256	junction_7	39.1366001255571	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTTGGCAGAGTATTT	NA	False	NA	4	True	NA	NA	NA	107828154	107849469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ENSMUST00000049353.9	chr11	+	1860	12	FSM	ENSMUSG00000037243.18	ENSMUST00000049353.9	1860	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	44.8549544883144	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATAAGAATCTGGGAGT	7776	False	NA	28	True	AATAAA	-35	NA	58197997	58205453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ENSMUST00000049355.11	chr9	-	4072	6	FSM	ENSMUSG00000042688.17	ENSMUST00000049355.11	4072	6	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_5	19.2727787306346	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCACTGCTCAGTCTT	NA	False	NA	-48	True	AATAAA	-16	NA	75317287	75294185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317144
ENSMUST00000049369.16	chr19	-	1992	10	FSM	ENSMUSG00000042694.18	ENSMUST00000049369.16	1992	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	7.26907877057606	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCATTTCCTTATGACTT	NA	False	NA	-10	True	AATAAA	-27	NA	47525558	47489471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ENSMUST00000049385.14	chr11	+	1322	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	0	0	0	0	multi-exon	FALSE	canonical	3	11207	junction_1	646.711854091312	79379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGATGTCCAGATTGCAC	3957	False	NA	21	True	AATAAA	-17	NA	100210710	100212922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
ENSMUST00000049388.9	chr18	+	1610	7	FSM	ENSMUSG00000042705.10	ENSMUST00000049388.9	1610	7	0	0	0	0	multi-exon	FALSE	canonical	3	1216	junction_3	103.11913282973	3331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCGTACAATGTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	47091882	47221062	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47219318_47219379_47220094
ENSMUST00000049411.12	chr14	+	1239	5	FSM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_1	194.901898400195	4030	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTTCTTTGTCCCT	179	False	NA	14	True	AATAAA	-15	NA	51162424	51164596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_51162487_51162669_51162782_51162973_51163162_51163617_51163811_51163912
ENSMUST00000049424.11	chr19	+	1204	11	FSM	ENSMUSG00000042729.12	ENSMUST00000049424.11	1204	11	0	0	0	0	multi-exon	FALSE	canonical	3	1012	junction_8	78.6635875103596	3547	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGACCTTTTGTGATGG	975	False	NA	28	True	AATAAA	-21	NA	8713202	8717988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
ENSMUST00000049460.12	chr11	+	2331	13	FSM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_1	53.84932682959	2242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	4138	False	NA	15	True	AATAAA	-17	NA	102321147	102327633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ENSMUST00000049470.11	chr1	-	3149	8	FSM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	214.632196074673	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289717	134273834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ENSMUST00000049527.7	chr11	+	3359	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	0	0	0	0	multi-exon	FALSE	canonical	3	1417	junction_9	119.858458191318	3870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGAATCAGTTTTTCTTC	NA	False	NA	20	True	AATAAA	-25	NA	109541746	109560482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ENSMUST00000049530.14	chr15	-	2092	3	FSM	ENSMUSG00000047878.14	ENSMUST00000049530.14	2092	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	20.5	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCCTCATGGTCACA	2223	False	NA	-8	True	AATAAA	-16	NA	83135975	83110922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83112796_83114714_83114859_83135900
ENSMUST00000049567.10	chr9	-	3172	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	30.9993548319961	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTCTGAATTAACC	NA	False	NA	0	True	AATAAA	-17	NA	21150367	21141026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
ENSMUST00000049628.16	chr5	-	371	4	FSM	ENSMUSG00000050856.17	ENSMUST00000049628.16	371	4	0	0	0	0	multi-exon	FALSE	canonical	3	3979	junction_1	506.673026275877	21557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTCTCTTTACTGTTT	5502	False	NA	0	True	AATAAA	-24	NA	108582314	108581109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_108581204_108581596_108581696_108581891_108581947_108582191
ENSMUST00000049642.6	chr17	-	1473	1	FSM	ENSMUSG00000045316.6	ENSMUST00000049642.6	1473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTTTCTTTTCCCAGG	NA	False	NA	3	True	AATAAA	-24	NA	25069338	25067865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25067900_25069300
ENSMUST00000049644.9	chr6	-	833	4	Antisense	novelGene_ENSMUSG00000046323.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10608	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGGTTTCCTTTTATA	2832	False	NA	NA	False	NA	NA	NA	122607231	122603368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr6_-_122603570_122605535_122605769_122606259_122606296_122606868
ENSMUST00000049699.9	chr8	+	3255	3	FSM	ENSMUSG00000048310.9	ENSMUST00000049699.9	3255	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	10	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAAGGCTGCCATTTTTT	NA	False	NA	-13	True	AATAAA	-17	NA	106627072	106658410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106627173_106639251_106640279_106656282
ENSMUST00000049732.11	chr14	-	311	2	FSM	ENSMUSG00000058351.12	ENSMUST00000049732.11	311	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATTTCAGCCATTTT	NA	False	NA	-11	True	AATAAA	-18	NA	30850795	30846461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_30846567_30850589
ENSMUST00000049821.4	chr4	-	750	5	FSM	ENSMUSG00000045699.5	ENSMUST00000049821.4	750	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	126.107840755442	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTGTTTTCTACCATTA	NA	False	NA	-2	True	AATACA	-20	NA	146994047	146976862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_146977116_146978205_146978333_146982168_146982273_146991977_146992072_146993875
ENSMUST00000049822.10	chr3	+	1781	6	FSM	ENSMUSG00000028145.10	ENSMUST00000049822.10	1781	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	4.47213595499958	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTTCTTGTTTTCAC	NA	False	NA	17	True	AATAAA	-27	NA	94217395	94239847	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_94217596_94224696_94224884_94230888_94231049_94231583_94231692_94237068_94237194_94238846
ENSMUST00000049861.11	chr5	-	3335	5	FSM	ENSMUSG00000061898.11	ENSMUST00000049861.11	3335	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	6.20483682299543	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTTTATGTGTTGTGT	NA	False	NA	NA	False	GATAAA	-3	NA	143166485	143157940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_143160814_143161790_143161887_143162219_143162347_143165240_143165298_143166303
ENSMUST00000049896.13	chrX	+	3579	11	FSM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_9	32.218007387174	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCGCATTTGTGTTATC	NA	False	NA	NA	False	NA	NA	NA	7563369	7576501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
ENSMUST00000049911.16	chr17	-	1138	7	FSM	ENSMUSG00000015120.16	ENSMUST00000049911.16	1138	7	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_6	1792.78505404301	2391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGTTGCATTATCAT	3820	False	NA	NA	False	AATAAA	-14	NA	25493284	25480889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493146
ENSMUST00000049937.13	chr3	-	2012	6	FSM	ENSMUSG00000001017.16	ENSMUST00000049937.13	2012	6	0	0	0	0	multi-exon	FALSE	canonical	3	892	junction_3	230.9202459725	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTAACCCAGGCTTTC	NA	False	NA	-10	True	NA	NA	NA	90416805	90406271	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416497
ENSMUST00000049966.6	chr6	+	921	5	FSM	ENSMUSG00000030058.18	ENSMUST00000049966.6	921	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	373.284408996679	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTCTTACCCAGTT	NA	False	NA	NA	False	AAAACA	-14	NA	87864909	87867741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171
ENSMUST00000049999.9	chrX	+	1309	2	FSM	ENSMUSG00000046550.9	ENSMUST00000049999.9	1309	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTCATCTAAAAAATTGA	NA	False	NA	NA	False	AATAAA	-19	NA	152615288	152617239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_152615545_152616186
ENSMUST00000050010.11	chr1	+	2532	8	FSM	ENSMUSG00000026696.16	ENSMUST00000050010.11	2532	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	137.243118113032	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAAGCACTGTGGCTT	NA	False	NA	67	True	AATAAA	-18	NA	162398396	162426647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_162398449_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162424617
ENSMUST00000050069.9	chr4	+	2949	4	FSM	ENSMUSG00000046667.15	ENSMUST00000050069.9	2949	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	18.4089350286454	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATTAAAAATAAAAAATAT	-1	True	NA	NA	False	TATAAA	-20	NA	12140266	12146700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_12140402_12140540_12140606_12143409_12143460_12144001
ENSMUST00000050083.6	chrX	-	3090	23	FSM	ENSMUSG00000031095.16	ENSMUST00000050083.6	3090	23	0	0	0	0	multi-exon	FALSE	non_canonical	3	112	junction_22	288.723912992818	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTTATTTGACTTCT	NA	False	NA	-5	True	GATAAA	-14	NA	37665060	37622450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37664956
ENSMUST00000050101.9	chr13	-	4844	4	FSM	ENSMUSG00000046351.12	ENSMUST00000050101.9	4844	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	41.5772373621272	4029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCTCCACTATACTA	9006	False	NA	0	True	AATAAA	-22	NA	23553378	23537272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_23541884_23546972_23547046_23552289_23552376_23553304
ENSMUST00000050104.8	chr6	+	2083	4	FSM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	5.71547606649408	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTATTTATTTATTT	NA	False	NA	32	True	AATAAA	-32	NA	135042648	135061707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_135042774_135055543_135056483_135060440_135060497_135060744
ENSMUST00000050129.6	chr5	-	542	3	FSM	ENSMUSG00000049387.11	ENSMUST00000050129.6	542	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	6	495	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAATAAGTTGTTGAAAAC	NA	False	NA	NA	False	AATAAA	-15	NA	71705548	71600166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_71600613_71660793_71660857_71705515
ENSMUST00000050205.12	chr5	+	954	5	FSM	ENSMUSG00000036639.13	ENSMUST00000050205.12	954	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	49.2461927462418	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTGTGACTACAGCG	NA	False	NA	10	True	NA	NA	NA	140317663	140323892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_140317711_140318177_140318229_140320209_140320375_140321067_140321214_140323347
ENSMUST00000050207.10	chr11	-	1309	4	FSM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_2	2.16024689946929	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCCTTCTTTGCTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	80033001	80027503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_80028106_80028743_80028894_80030691_80031150_80032902
ENSMUST00000050211.7	chr8	-	2406	10	FSM	ENSMUSG00000035824.8	ENSMUST00000050211.7	2406	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	11.1055541659718	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCATTCATTCATTCAT	NA	False	NA	6	True	AATAAA	-30	NA	104975190	104953316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104963403_104963478_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104975032
ENSMUST00000050214.9	chr17	-	2102	14	FSM	ENSMUSG00000002625.11	ENSMUST00000050214.9	2102	14	0	0	0	0	multi-exon	TRUE	canonical	3	272	junction_6	38.0609912279546	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569581	32540397	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ENSMUST00000050273.9	chr16	+	444	3	FSM	ENSMUSG00000046516.11	ENSMUST00000050273.9	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	2901	junction_2	455	16566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTTGTGTTTCTTTT	NA	False	NA	28	True	ATTAAA	-30	NA	38167352	38173125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_38167570_38169602_38169692_38172987
ENSMUST00000050323.6	chr2	+	1606	8	FSM	ENSMUSG00000002104.12	ENSMUST00000050323.6	1606	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	10.5791477608992	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	False	NA	7	True	AATAAA	-15	NA	90865985	90876074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
ENSMUST00000050328.15	chrX	-	3647	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	0	0	0	0	multi-exon	FALSE	canonical	3	1008	junction_2	64.9970120101527	5522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGCCCATGTGTTT	NA	False	NA	-2	True	AATAAA	-21	NA	93256315	93232312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ENSMUST00000050410.11	chr2	-	775	5	FSM	ENSMUSG00000044627.12	ENSMUST00000050410.11	775	5	0	0	0	0	multi-exon	FALSE	canonical	3	3309	junction_1	124.51380445557	15125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178087	32168827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32177897
ENSMUST00000050472.16	chr5	+	3757	9	FSM	ENSMUSG00000041264.17	ENSMUST00000050472.16	3757	9	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	75.8798392196504	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121369	149152244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUST00000050476.11	chr18	+	2362	4	FSM	ENSMUSG00000033272.13	ENSMUST00000050476.11	2362	4	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	140.362229804017	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGTACAGTTGTCCTG	NA	False	NA	11	True	AATAAA	-29	NA	36812631	36816906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_36812677_36813568_36813668_36814580_36814819_36814926
ENSMUST00000050480.8	chr14	-	2457	16	FSM	ENSMUSG00000046753.11	ENSMUST00000050480.8	2457	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	25.3941375561806	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTCTTGTC	7541	False	NA	NA	False	AATAAA	-15	NA	27230402	27204368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27228607_27228673_27230378
ENSMUST00000050487.16	chr18	+	1224	8	FSM	ENSMUSG00000024610.16	ENSMUST00000050487.16	1224	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	5.45108115095397	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTTCTGCCTCTTCA	NA	False	NA	7	True	AATAAA	-17	NA	60936919	60945724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_60937083_60940979_60941150_60941303_60941384_60942099_60942163_60943053_60943147_60943399_60943491_60944930_60944994_60945223
ENSMUST00000050497.14	chr6	+	2534	10	FSM	ENSMUSG00000046679.17	ENSMUST00000050497.14	2534	10	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	6.73483664919633	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCATTGATGTCATGA	1453	False	NA	NA	False	AATAAA	-26	NA	86415355	86447370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_86415470_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ENSMUST00000050516.14	chr10	+	1450	11	FSM	ENSMUSG00000044475.15	ENSMUST00000050516.14	1450	11	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_7	12.5797456254091	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	26	True	AATAAA	-16	NA	59838660	59935808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
ENSMUST00000050542.6	chr18	-	565	2	FSM	ENSMUSG00000024240.14	ENSMUST00000050542.6	565	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTTATTTAACCTTTTA	-18	True	NA	NA	False	AATAAA	-15	NA	6490856	6489159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_6489331_6490462
ENSMUST00000050551.10	chrX	-	901	3	FSM	ENSMUSG00000051159.17	ENSMUST00000050551.10	901	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	38	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCCTGGGTGTGTTCTT	NA	False	NA	0	True	AATAAA	-20	NA	101295787	101290986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_101291615_101292168_101292294_101295639
ENSMUST00000050552.15	chr1	+	3876	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	0	0	0	0	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	4561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTACTGTGTCTGTGCTTT	657	False	NA	13	True	NA	NA	NA	58432056	58446512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUST00000050567.11	chr1	-	3641	2	FSM	ENSMUSG00000043629.13	ENSMUST00000050567.11	3641	2	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	0	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTCAGTCCTCATTT	680	False	NA	-5	True	AATAAA	-14	NA	52992003	52961482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_52964894_52991773
ENSMUST00000050575.9	chr14	+	2830	2	FSM	ENSMUSG00000045691.15	ENSMUST00000050575.9	2830	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGTCTTTATTTCCGTT	NA	False	NA	7	True	AATAAA	-18	NA	55332240	55336443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55333464_55334836
ENSMUST00000050580.11	chr4	-	402	4	FSM	ENSMUSG00000063882.13	ENSMUST00000050580.11	402	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	490.539159157214	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCTTCCTTTGCC	7697	False	NA	-7	True	AATAAA	-17	NA	115932228	115924161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_115924370_115927059_115927117_115927933_115927955_115932112
ENSMUST00000050584.10	chr18	-	831	3	Antisense	novelGene_ENSMUSG00000046727.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2591	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCCGAGCCTCCTGCGCT	NA	False	NA	NA	False	NA	NA	NA	36536033	36481749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr18_-_36481870_36499567_36499795_36535549
ENSMUST00000050611.14	chr11	-	4804	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGGTGTTGTATCATTT	3055	False	NA	NA	False	ATTAAA	-23	NA	20199418	20177036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
ENSMUST00000050630.14	chr17	+	1508	12	FSM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	13.7774519348892	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGAGTGGCCTGCTTTGTTT	NA	False	NA	26	True	AATAAA	-27	NA	45088038	45430177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352274_45359168_45359280_45430029
ENSMUST00000050686.10	chr4	-	3456	28	FSM	ENSMUSG00000049488.15	ENSMUST00000050686.10	3456	28	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	5.81280927905584	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGCGTTATTGAT	4	True	NA	NA	False	AATAAA	-32	NA	12087957	12039354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754_12061861_12063034_12063159_12063673_12063831_12068867_12068934_12069413_12069492_12070236_12070346_12070448_12070604_12073893_12073957_12075454_12075530_12075622_12075693_12077335_12077436_12079874_12079969_12085911_12086001_12087714
ENSMUST00000050705.4	chr16	+	1271	6	FSM	ENSMUSG00000058550.16	ENSMUST00000050705.4	1271	6	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_3	211.400094607358	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104149	48114600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_48104205_48108240_48108359_48109401_48109464_48111376_48111678_48113273_48113470_48114061
ENSMUST00000050735.12	chr7	+	4006	3	FSM	ENSMUSG00000049421.14	ENSMUST00000050735.12	4006	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	24	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGTTGTTTTCCTTTT	NA	False	NA	13	True	NA	NA	NA	29794218	29807047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_29794637_29798952_29799148_29803654
ENSMUST00000050813.4	chr10	-	1567	3	FSM	ENSMUSG00000049038.4	ENSMUST00000050813.4	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	4.5	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTATTCCAAAACATCAT	NA	False	NA	2	True	AATAAA	-23	NA	84963891	84955296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_84956679_84962231_84962351_84963825
ENSMUST00000050827.14	chr5	-	2344	12	FSM	ENSMUSG00000029422.16	ENSMUST00000050827.14	2344	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	200.336700053759	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGTATGCTATTTGC	4346	False	NA	NA	False	AATAAA	-15	NA	123887452	123866488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ENSMUST00000050833.14	chr7	-	1944	5	FSM	ENSMUSG00000030689.16	ENSMUST00000050833.14	1944	5	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_1	87.2969071617088	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGCTTGGATTTCT	9569	False	NA	1	True	ATTAAA	-31	NA	126460635	126450751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411
ENSMUST00000050880.8	chr11	+	2695	17	FSM	ENSMUSG00000039908.15	ENSMUST00000050880.8	2695	17	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	16.3122605346408	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATGTGTGTGTGGTGT	NA	False	NA	NA	False	ATTAAA	-24	NA	119246382	119271905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_119246462_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119253123_119254225_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ENSMUST00000050881.10	chr16	+	1329	3	FSM	ENSMUSG00000022516.11	ENSMUST00000050881.10	1329	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	274	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGTTGCTTCTGAGTG	105	False	NA	9	True	AATAAA	-15	NA	4756985	4758880	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_4757158_4757241_4757578_4758059
ENSMUST00000050905.16	chr9	-	1259	10	FSM	ENSMUSG00000032366.16	ENSMUST00000050905.16	1259	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	231.62890712794	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGGTACTTTTTTATT	NA	False	NA	1	True	AATAAA	-22	NA	66956546	66935173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUST00000051011.14	chr10	-	2335	5	FSM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	8.20060973342836	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGAGATGCGCCTCTA	5737	False	NA	-7	True	AATAAA	-18	NA	128640239	128635904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128640101
ENSMUST00000051043.4	chr4	-	913	3	FSM	ENSMUSG00000046133.4	ENSMUST00000051043.4	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	115.5	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTTCTTCTTGATGT	NA	False	NA	-2	True	ATTAAA	-26	NA	101750986	101747216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_101747741_101747885_101748198_101750909
ENSMUST00000051094.9	chr8	-	1792	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_5	234.329170185873	1778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTCTTGTCTTAGTCTA	NA	False	NA	-19	True	AATAAA	-1	NA	23747090	23731361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
ENSMUST00000051186.9	chr15	+	4655	9	FSM	ENSMUSG00000050697.10	ENSMUST00000051186.9	4655	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	19.5316249964001	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTATTTCTTATTTCAT	NA	False	NA	18	True	AATAAA	-27	NA	5173342	5211380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_5173478_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ENSMUST00000051226.8	chr15	+	2879	23	FSM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5577830991277	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTTTTGGGCGCTCTT	1596	False	NA	1	True	AATAAA	-13	NA	98006346	98030322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_98006493_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ENSMUST00000051256.10	chrX	+	2253	4	FSM	ENSMUSG00000033460.15	ENSMUST00000051256.10	2253	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	53.7463177033243	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618718	133622666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133618800_133619668_133619858_133620375_133620475_133620782
ENSMUST00000051341.6	chr15	+	1754	2	FSM	ENSMUSG00000045665.6	ENSMUST00000051341.6	1754	2	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	0	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTCTCCTGTACCCA	NA	False	NA	27	True	AATAAA	-23	NA	102187888	102190189	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102188065_102188611
ENSMUST00000051356.12	chr7	+	2923	14	FSM	ENSMUSG00000004056.16	ENSMUST00000051356.12	2923	14	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	140.806720522774	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	27305282	27338878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27305363_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ENSMUST00000051364.4	chr7	-	763	2	FSM	ENSMUSG00000044709.7	ENSMUST00000051364.4	763	2	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	0	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTGCTGTGTGTGTGT	2944	False	NA	-9	True	AATAAA	-19	NA	19307268	19298873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_19299602_19307233
ENSMUST00000051395.9	chr11	-	3824	10	FSM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	5.79484658240235	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCCAGAGTTCATGTTG	NA	False	NA	-13	True	ATTAAA	-16	NA	86999534	86979978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
ENSMUST00000051414.2	chrX	+	1970	4	FSM	ENSMUSG00000045330.9	ENSMUST00000051414.2	1970	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.62466929133727	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAATCTTTTCTGTTTGG	NA	False	NA	NA	False	AATAAA	-21	NA	61330747	61335684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_61330842_61332956_61333046_61333767_61333841_61333970
ENSMUST00000051435.8	chr7	+	2725	4	FSM	ENSMUSG00000034538.9	ENSMUST00000051435.8	2725	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	9.89949493661167	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAATCAAGAGTTTCTA	2969	False	NA	NA	False	AATAAA	-29	NA	7174328	7186561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_7174558_7175135_7175175_7177553_7177681_7184231
ENSMUST00000051477.13	chr4	-	2108	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	0	0	0	0	multi-exon	FALSE	canonical	3	1589	junction_5	116.347067002138	7048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAAGGTTATTTTCCTC	NA	False	NA	-1	True	ATTAAA	-24	NA	137085031	137047006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ENSMUST00000051493.8	chr11	-	1753	2	FSM	ENSMUSG00000043648.8	ENSMUST00000051493.8	1753	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGCATGTCTACCTTA	NA	False	NA	-13	True	AATAAA	-16	NA	59678471	59674722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_59676052_59678047
ENSMUST00000051526.6	chr17	-	1019	3	FSM	ENSMUSG00000045378.6	ENSMUST00000051526.6	1019	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	5	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTGTGTGTCTCTTTT	6213	False	NA	2	True	AATAAA	-18	NA	29161238	29152957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_29153781_29160215_29160344_29161170
ENSMUST00000051569.7	chrX	-	2785	1	FSM	ENSMUSG00000050424.10	ENSMUST00000051569.7	2785	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTGAGTTCCTGAGCC	NA	False	NA	NA	False	NA	NA	NA	72080709	72077924	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72077900_72080700
ENSMUST00000051589.9	chr9	-	2843	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	2871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTAGGGCTTGACATGT	1	True	NA	NA	False	AATAAA	-45	NA	4309467	4294792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
ENSMUST00000051633.3	chr4	-	2992	2	FSM	ENSMUSG00000047719.3	ENSMUST00000051633.3	2992	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGGCTTTGTTTCTT	NA	False	NA	0	True	ATTAAA	-16	NA	148529228	148518951	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148521100_148528384
ENSMUST00000051667.14	chr9	+	2010	4	FSM	ENSMUSG00000057895.12	ENSMUST00000051667.14	2010	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	7.71722460186015	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGTTTTAACTGTAT	4874	False	NA	11	True	AATAAA	-22	NA	122752136	122760093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_122752284_122754072_122754362_122755374_122755520_122758664
ENSMUST00000051671.11	chr6	-	1511	5	FSM	ENSMUSG00000029922.16	ENSMUST00000051671.11	1511	5	0	0	0	0	multi-exon	FALSE	canonical	3	1568	junction_2	1258.9473777724	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAGTCTGTGTGAAATG	NA	False	NA	-5	True	AATAAA	-16	NA	39397292	39377693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ENSMUST00000051672.9	chr8	-	792	5	FSM	ENSMUSG00000046718.9	ENSMUST00000051672.9	792	5	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_3	21.2176223927187	1597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGCTTCTAAGTTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	71990100	71986898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71987125_71987315_71987437_71988429_71988470_71989002_71989079_71989771
ENSMUST00000051674.3	chr4	-	3505	4	FSM	ENSMUSG00000050966.10	ENSMUST00000051674.3	3505	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	2.62466929133727	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTCTGATGCTTAGGAC	8250	False	NA	9	True	AATAAA	-30	NA	133746152	133730640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_133733633_133735221_133735407_133745363_133745561_133746021
ENSMUST00000051772.10	chr19	-	1800	5	FSM	ENSMUSG00000049670.10	ENSMUST00000051772.10	1800	5	0	0	0	0	multi-exon	FALSE	canonical	2	63	junction_4	19.0574788468989	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTGTTATGAACTTT	4140	False	NA	-3	True	AATAAA	-21	NA	42074796	42063380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42074635
ENSMUST00000051784.10	chr13	+	2421	7	FSM	ENSMUSG00000021532.12	ENSMUST00000051784.10	2421	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	41.7053154086303	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTGTACTCTTGTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	68730366	68740457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_68730470_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
ENSMUST00000051803.8	chr19	-	1924	10	FSM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	3.58322566591047	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACAGGTGTCTTGTCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	3979808	3963490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602_3968990_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738_3973902_3979695
ENSMUST00000051822.13	chr9	-	1187	11	FSM	ENSMUSG00000061559.16	ENSMUST00000051822.13	1187	11	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_10	209.060852385137	3065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTGTGAACGTGCT	5423	False	NA	-3	True	AATAAA	-19	NA	54641801	54624442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641758
ENSMUST00000051867.7	chr8	-	2107	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_3	374.138417641861	1938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACAGTTGCCACCATCT	NA	False	NA	NA	False	AGTAAA	-27	NA	79547769	79533079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
ENSMUST00000051870.8	chr8	+	4013	2	FSM	ENSMUSG00000047710.9	ENSMUST00000051870.8	4013	2	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	0	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTGTACTTAATTT	NA	False	NA	17	True	ATTAAA	-19	NA	13919640	13931639	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_13919812_13927797
ENSMUST00000051937.9	chr5	+	1812	4	FSM	ENSMUSG00000049907.9	ENSMUST00000051937.9	1812	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	1.4142135623731	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGACTGGGTCTTTATT	NA	False	NA	21	True	AATAAA	-23	NA	74355946	74360142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_74356252_74356763_74356821_74357927_74358005_74358769
ENSMUST00000052027.8	chr4	+	1452	3	FSM	ENSMUSG00000070890.4	ENSMUST00000052027.8	1452	3	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	2.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGATGCTGGGAAATGA	NA	False	NA	NA	False	NA	NA	NA	101797603	101800380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_101797891_101798317_101798903_101799800
ENSMUST00000052107.5	chr2	+	2708	2	FSM	ENSMUSG00000045822.5	ENSMUST00000052107.5	2708	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	500	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTGTTTTTTGAGACG	3063	False	NA	22	True	AATAAA	-22	NA	164647017	164664050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_164647352_164661676
ENSMUST00000052120.14	chr3	-	3432	27	FSM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_13	50.4098586206493	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGTTCCCTGAATAT	NA	False	NA	-15	True	ATTAAA	-15	NA	100069723	100045495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ENSMUST00000052126.6	chr14	-	408	3	FSM	ENSMUSG00000043681.6	ENSMUST00000052126.6	408	3	0	0	0	0	multi-exon	FALSE	canonical	3	2248	junction_2	168.5	9050	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGAGTTTACCTCTGTT	NA	False	NA	-6	True	AATAAA	-21	NA	34077390	34073837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_34074035_34075654_34075718_34077242
ENSMUST00000052140.3	chr11	-	2810	1	FSM	ENSMUSG00000050107.3	ENSMUST00000052140.3	2810	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGAGATTTGGCTTAT	NA	False	NA	-7	True	AATAAA	-17	NA	73029120	73026310	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_73026300_73029100
ENSMUST00000052145.6	chr7	+	333	3	FSM	ENSMUSG00000047721.9	ENSMUST00000052145.6	333	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1142	2448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGGTCTCAGTGTGC	1141	False	NA	18	True	ATTAAA	-13	NA	126295137	126295865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_126295272_126295392_126295453_126295726
ENSMUST00000052201.9	chr12	-	4017	14	FSM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_12	54.2140181439599	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219354	65179507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ENSMUST00000052248.8	chr19	+	1864	10	FSM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	0	0	0	0	multi-exon	FALSE	canonical	3	5201	junction_1	1272.81743475733	65340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTTTTCTGTCATAGC	843	False	NA	NA	False	AAGAAA	-37	NA	8944404	8955843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ENSMUST00000052249.7	chr13	+	1849	11	FSM	ENSMUSG00000041632.8	ENSMUST00000052249.7	1849	11	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_10	37.2860563750043	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGTGGTGTGATTT	NA	False	NA	20	True	AATAAA	-15	NA	99481293	99552070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
ENSMUST00000052266.15	chr6	+	4824	18	FSM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_11	15.4671210608191	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGTATGTTGTTTTTCTC	NA	False	NA	20	True	ATTAAA	-22	NA	33226019	33950914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
ENSMUST00000052283.7	chrX	-	1854	4	FSM	ENSMUSG00000046942.18	ENSMUST00000052283.7	1854	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	116.448367194316	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTCTCTTTTATTAC	NA	False	NA	0	True	AATAAA	-22	NA	78715041	78666836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_78668390_78671446_78671527_78685326_78685395_78714888
ENSMUST00000052325.7	chr16	-	923	6	FSM	ENSMUSG00000005732.15	ENSMUST00000052325.7	923	6	0	0	0	0	multi-exon	FALSE	canonical	1	140	junction_5	4913.40247079353	3218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTGAAAACCTGGACC	7798	False	NA	-19	True	AATAAA	-4	NA	18065931	18057665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18065890
ENSMUST00000052348.12	chr7	+	1525	11	FSM	ENSMUSG00000000154.17	ENSMUST00000052348.12	1525	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.44131112314674	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGGGCTTTGCCTAG	856	False	NA	NA	False	AATAAA	-25	NA	143027472	143053071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_143027575_143029806_143030043_143033021_143033120_143033456_143033618_143034126_143034260_143044548_143044662_143045482_143045591_143046578_143046680_143050687_143050790_143051046_143051168_143052821
ENSMUST00000052355.15	chr10	+	1267	10	FSM	ENSMUSG00000035351.17	ENSMUST00000052355.15	1267	10	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	64.7921653547559	2953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTTCCTATTGTGTT	NA	False	NA	12	True	AATAAA	-20	NA	87982853	88014252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
ENSMUST00000052374.13	chr15	-	3033	16	FSM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_15	51.7762708412089	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614204	81588453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ENSMUST00000052380.5	chr19	-	708	2	FSM	ENSMUSG00000050957.5	ENSMUST00000052380.5	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGCTTATATGTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	29302756	29298743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_29299140_29302444
ENSMUST00000052396.7	chr18	+	2769	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTTAATTAAAA	NA	False	NA	3	True	ATTAAA	-15	NA	21135047	21161281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
ENSMUST00000052499.9	chr15	-	838	4	FSM	ENSMUSG00000051518.9	ENSMUST00000052499.9	838	4	0	0	0	0	multi-exon	FALSE	canonical	3	697	junction_3	66.5181679443043	1780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAAGTGTGTGTGTGTG	NA	False	NA	-5	True	AATAAA	-25	NA	80148516	80144815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_80145332_80145497_80145596_80148183_80148319_80148427
ENSMUST00000052529.4	chr1	+	5594	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	0	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGTGACTTTATGTAT	5567	False	NA	15	True	AATAAA	-20	NA	133058880	133067521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_133061354_133064400
ENSMUST00000052566.8	chr11	-	1347	6	FSM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_5	35.6561355169065	1727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATCTTTGGTCTTAAA	1631	False	NA	-29	True	AATAAA	-21	NA	78402998	78397880	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_78398632_78399144_78399258_78399478_78399522_78400550_78400641_78401173_78401248_78402722
ENSMUST00000052580.10	chr8	-	2824	7	FSM	ENSMUSG00000050751.15	ENSMUST00000052580.10	2824	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	10.4083299973307	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAGTATGTGATTTTG	NA	False	NA	-2	True	AATAAA	-25	NA	125160675	125095787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125106922_125107058_125110933_125111362_125160537
ENSMUST00000052590.8	chr5	-	1123	2	FSM	ENSMUSG00000029616.10	ENSMUST00000052590.8	1123	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGGTTTTCTTTTTAG	3222	False	NA	-41	True	AATAAA	-14	NA	121590559	121582818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_121583636_121590253
ENSMUST00000052631.8	chr2	+	1621	3	FSM	ENSMUSG00000042821.8	ENSMUST00000052631.8	1621	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	2	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCAGTGTTGGGGTGGG	4755	False	NA	NA	False	AATAAA	-24	NA	167380114	167384734	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_167380292_167380590_167381119_167383818
ENSMUST00000052645.13	chr3	-	1155	5	FSM	ENSMUSG00000050174.16	ENSMUST00000052645.13	1155	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	11.8743420870379	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTTTTTCTCTACTGA	NA	False	NA	62	True	TATAAA	-29	NA	37473745	37459058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849_37471054_37473490
ENSMUST00000052691.9	chr17	+	2506	2	FSM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGTGCTGTTACTTTA	NA	False	NA	9	True	AATAAA	-17	NA	15163445	15166198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_15163582_15163828
ENSMUST00000052708.7	chr2	-	3137	9	FSM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	0	0	0	0	multi-exon	TRUE	canonical	3	256	junction_2	30.0416377715996	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGTTGTTCTCTT	NA	False	NA	0	True	AATAAA	-20	NA	129139132	129110129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129138233_129138301_129139024
ENSMUST00000052712.6	chr4	+	4327	13	FSM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	0	0	0	0	multi-exon	FALSE	canonical	2	97	junction_11	33.5186515241887	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTTGTTTTATTTTT	-18	True	NA	11	True	NA	NA	NA	3574874	3616619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ENSMUST00000052725.15	chr9	-	4787	6	FSM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	23.9198662203617	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATTGTGTGGACCTGT	NA	False	NA	-1	True	NA	NA	NA	42175552	42162890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
ENSMUST00000052740.14	chr9	+	3049	11	FSM	ENSMUSG00000046603.17	ENSMUST00000052740.14	3049	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	5.03984126734166	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGTTCCAGGATTTCCA	NA	False	NA	22	True	AATAAA	-22	NA	122634603	122665399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_122634754_122637831_122637902_122640822_122640959_122643496_122643654_122647838_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
ENSMUST00000052761.9	chrX	-	1331	13	FSM	ENSMUSG00000002010.18	ENSMUST00000052761.9	1331	13	0	0	0	0	multi-exon	FALSE	canonical	2	205	junction_10	445.162891535222	6415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72825903_72825916_72826280_72826323_72830380
ENSMUST00000052798.14	chr10	+	2000	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	0	0	0	0	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	7388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAGTGTCACCTTGTTT	846	False	NA	39	True	AATAAA	-40	NA	127894822	127913141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ENSMUST00000052832.6	chr17	-	755	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	0	0	0	0	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	7948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTAGCTTGGATAGGAA	NA	False	NA	-32	True	TTTAAA	-27	NA	56916771	56914451	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
ENSMUST00000052919.8	chr11	-	2184	4	FSM	ENSMUSG00000038150.8	ENSMUST00000052919.8	2184	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	8.33999733546454	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGCTTCCTG	1323	False	NA	1	True	AATAAA	-23	NA	98478194	98472081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_98473674_98473961_98474114_98474767_98474967_98477953
ENSMUST00000052999.13	chr4	+	1307	10	FSM	ENSMUSG00000028601.19	ENSMUST00000052999.13	1307	10	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_3	43.9463758530471	4100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGCTGGAATTGTTGG	NA	False	NA	24	True	AATAAA	-17	NA	108022633	108036505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ENSMUST00000053116.7	chr5	-	1684	2	FSM	ENSMUSG00000051022.8	ENSMUST00000053116.7	1684	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTTGCTCCTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	39801977	39771281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_39772748_39801759
ENSMUST00000053150.8	chr9	-	374	1	FSM	ENSMUSG00000050621.8	ENSMUST00000053150.8	374	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	168038	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTATCCCTTGGCCAGG	7274	False	NA	NA	False	NA	NA	NA	114811807	114811433	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_114811400_114811800
ENSMUST00000053157.7	chr4	-	593	3	FSM	ENSMUSG00000059816.6	ENSMUST00000053157.7	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	6	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATCATTACTTCTGGAA	NA	False	NA	-11	True	AATAAA	-6	NA	108240546	108224973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_108225239_108234543_108234684_108240358
ENSMUST00000053252.9	chr8	-	1212	2	FSM	ENSMUSG00000048644.9	ENSMUST00000053252.9	1212	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCTGAGTTAACCAGTC	NA	False	NA	-16	True	AATAAA	-34	NA	4309274	4307659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_4308648_4309050
ENSMUST00000053266.11	chr1	-	3031	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	0	0	0	0	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	6197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTGTGTATGTGTG	NA	False	NA	-12	True	AATACA	-9	NA	20890536	20873191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ENSMUST00000053293.14	chr13	+	2270	5	FSM	ENSMUSG00000036721.15	ENSMUST00000053293.14	2270	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.1833292702744	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATACTGTCCTTTGTGTGT	NA	False	NA	15	True	CATAAA	-20	NA	21547001	21554001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_21547346_21547508_21547541_21547749_21548222_21550784_21550927_21552721
ENSMUST00000053298.8	chr7	+	760	4	FSM	ENSMUSG00000046364.15	ENSMUST00000053298.8	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	7451	junction_1	4009.72894622844	28357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCTTTGCATCCTT	NA	False	NA	2	True	ATTAAA	-14	NA	109118419	109120973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_109118430_109118791_109119201_109119674_109119850_109120807
ENSMUST00000053361.12	chr11	+	3667	5	FSM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7.21110255092798	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGTGTTTCTAAGTGA	928	False	NA	NA	False	ATTAAA	-38	NA	114742667	114763443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_114742713_114754292_114755373_114757450_114757546_114759321_114759472_114761146
ENSMUST00000053392.11	chr7	-	3621	3	FSM	ENSMUSG00000048921.12	ENSMUST00000053392.11	3621	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	4.5	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTGCTCCTTCTGGAA	4357	False	NA	NA	False	ATTAAA	-14	NA	127048330	127041307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127044310_127047534_127047649_127047825
ENSMUST00000053434.15	chr17	+	3198	10	FSM	ENSMUSG00000024457.17	ENSMUST00000053434.15	3198	10	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_5	42.9366458349457	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGAAATTTCAAGACAGT	NA	False	NA	13	True	AATAAA	-20	NA	37148037	37170272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37165194_37167093_37167117_37167547_37167664_37167880_37167914_37168291
ENSMUST00000053498.13	chr5	-	4474	17	FSM	ENSMUSG00000045078.13	ENSMUST00000053498.13	4474	17	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_14	28.015550927119	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6130	False	NA	-1	True	AATAAA	-16	NA	143098749	142976647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084261_143098653
ENSMUST00000053536.5	chr11	-	3008	2	FSM	ENSMUSG00000041598.8	ENSMUST00000053536.5	3008	2	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	0	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	7363	False	NA	-2	True	ATTAAA	-15	NA	113642707	113617677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_113620492_113642513
ENSMUST00000053540.11	chrX	+	930	3	FSM	ENSMUSG00000046432.13	ENSMUST00000053540.11	930	3	0	0	0	0	multi-exon	FALSE	canonical	3	4289	junction_2	392	13717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGAAATTCAACAGTATT	NA	False	NA	NA	False	AATAAA	-32	NA	135171009	135172727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_135171151_135171558_135171632_135172011
ENSMUST00000053558.10	chr8	-	927	5	FSM	ENSMUSG00000050914.17	ENSMUST00000053558.10	927	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	16.393596310755	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGCATTCTTTACTA	NA	False	NA	NA	False	ATTAAA	-22	NA	46452904	46449938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452653
ENSMUST00000053583.7	chr9	+	1838	2	FSM	ENSMUSG00000051238.7	ENSMUST00000053583.7	1838	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGACTCTGGTGGTCTG	NA	False	NA	8	True	NA	NA	NA	21867050	21869560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_21867301_21867972
ENSMUST00000053594.7	chr10	-	1661	3	FSM	ENSMUSG00000045867.11	ENSMUST00000053594.7	1661	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	28.5	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTGCGTGTCCATT	NA	False	NA	NA	False	ATTAAA	-13	NA	95159970	95010607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_95011841_95158447_95158752_95159846
ENSMUST00000053611.5	chr12	+	458	2	FSM	ENSMUSG00000043319.6	ENSMUST00000053611.5	458	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCTTAGTATTGCTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	102865574	102866785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_102865751_102866503
ENSMUST00000053657.13	chr5	-	1073	4	FSM	ENSMUSG00000044339.13	ENSMUST00000053657.13	1073	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	257.69534122465	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	8020	False	NA	-2	True	AATAAA	-22	NA	114266237	114261986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_114262316_114263592_114263792_114265586_114265831_114265936
ENSMUST00000053664.9	chr2	-	1977	8	FSM	ENSMUSG00000050043.17	ENSMUST00000053664.9	1977	8	0	0	0	0	multi-exon	FALSE	canonical	3	1517	junction_2	94.3986336808766	2856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTTGCTGTTTTTCCT	5291	False	NA	-8	True	AATAAA	-16	NA	84508400	84501660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ENSMUST00000053705.8	chr19	+	2032	2	FSM	ENSMUSG00000047379.8	ENSMUST00000053705.8	2032	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGCTCTGTTACTCTC	202	False	NA	9	True	AATAAA	-16	NA	5088853	5091159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5090061_5090334
ENSMUST00000053737.9	chr5	+	3313	18	FSM	ENSMUSG00000029439.15	ENSMUST00000053737.9	3313	18	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_11	20.649823847033	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGGCTCTCCTTCTTC	NA	False	NA	16	True	AATAAA	-29	NA	129578284	129648448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ENSMUST00000053753.8	chr4	-	1685	2	FSM	ENSMUSG00000050234.8	ENSMUST00000053753.8	1685	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGTGTGCACTGATGTT	NA	False	NA	0	True	AATAAA	-17	NA	127207832	127205213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_127206779_127207712
ENSMUST00000053811.10	chr12	+	2764	15	FSM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_7	23.9123612470237	1809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTCCGGGATCTGTGCTC	NA	False	NA	20	True	ATTAAA	-20	NA	85157606	85180862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ENSMUST00000053855.8	chr3	+	2722	3	FSM	ENSMUSG00000046818.8	ENSMUST00000053855.8	2722	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	6.5	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTGGCCTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	137329432	137334094	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_137329645_137329892_137330035_137331726
ENSMUST00000053862.12	chr4	-	1532	9	FSM	ENSMUSG00000028744.16	ENSMUST00000053862.12	1532	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_8	18.155147341732	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCTGTTTCTGCTGCTC	NA	False	NA	-3	True	AGTAAA	-15	NA	139038019	139025838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139034002_139035039_139035162_139037939
ENSMUST00000053872.12	chr3	+	2805	5	FSM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	33.5885024971343	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGGTTTCAGAGTAATC	1874	False	NA	21	True	AATAAA	-11	NA	95136042	95143720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95136177_95139095_95139404_95139859_95139971_95140798_95140891_95141560
ENSMUST00000053902.4	chr8	-	4319	9	FSM	ENSMUSG00000035151.13	ENSMUST00000053902.4	4319	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	7.29297607290741	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGTGGATGCTTGA	8170	False	NA	3	True	AATAAA	-23	NA	84059115	84039650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058978
ENSMUST00000053918.9	chr15	-	1339	6	FSM	ENSMUSG00000022571.10	ENSMUST00000053918.9	1339	6	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	15.2525407719501	863	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGGACTTTAGTAGAG	NA	False	NA	-13	True	NA	NA	NA	75793409	75788325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75788929_75789085_75789179_75790100_75790314_75790521_75790702_75791077_75791143_75793224
ENSMUST00000053950.10	chr7	-	2923	10	FSM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	16.1894646431591	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTTCTCTCCTCCTGT	572	False	NA	-2	True	AATAAA	-16	NA	67294979	67163157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ENSMUST00000053981.6	chrX	+	1094	3	FSM	ENSMUSG00000045237.6	ENSMUST00000053981.6	1094	3	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	1.5	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTCTAGCTCCCT	NA	False	NA	14	True	AATAAA	-21	NA	69429482	69433023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_69429758_69431499_69431773_69432477
ENSMUST00000054002.4	chr11	-	2552	2	FSM	ENSMUSG00000053113.4	ENSMUST00000054002.4	2552	2	0	0	0	0	multi-exon	FALSE	canonical	3	1319	junction_1	0	956	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTGAGCCTTTCTTTC	NA	False	NA	NA	False	AATAAA	-30	NA	117860012	117856904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_117859145_117859700
ENSMUST00000054050.5	chr6	+	1384	2	FSM	ENSMUSG00000051124.7	ENSMUST00000054050.5	1384	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTATGATTGACTTCTTG	1289	False	NA	17	True	NA	NA	NA	48653062	48655633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_48653189_48654375
ENSMUST00000054080.15	chr6	-	2697	6	FSM	ENSMUSG00000039985.15	ENSMUST00000054080.15	2697	6	0	0	0	0	multi-exon	FALSE	canonical	3	1893	junction_3	186.383046439315	3425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCTCTGGTAAGAATTT	NA	False	NA	NA	False	AATAAA	-24	NA	148847965	148822532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
ENSMUST00000054125.9	chr10	+	2130	11	FSM	ENSMUSG00000025359.11	ENSMUST00000054125.9	2130	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	12.3385574521497	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTTGTTGCGTTGCTGG	NA	False	NA	NA	False	NA	NA	NA	128542126	128556107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
ENSMUST00000054274.8	chr13	+	4348	4	FSM	ENSMUSG00000045312.13	ENSMUST00000054274.8	4348	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	5.35412613473634	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCAAGTTTGTTGGC	2226	False	NA	9	True	ATTAAA	-18	NA	94194303	94331917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_94194415_94257284_94257344_94310530_94311147_94328355
ENSMUST00000054289.13	chr17	+	1094	5	FSM	ENSMUSG00000044533.16	ENSMUST00000054289.13	1094	5	0	0	0	0	multi-exon	FALSE	canonical	3	8303	junction_1	1140.19655651997	84147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTGTCTGTCT	6237	False	NA	4	True	AATAAA	-23	NA	24939083	24940903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
ENSMUST00000054310.4	chr7	+	1391	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTAGTCTGCTTCTCAT	7571	False	NA	NA	False	NA	NA	NA	100186306	100189576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_100186400_100188278
ENSMUST00000054311.6	chr11	+	1342	2	FSM	ENSMUSG00000047040.10	ENSMUST00000054311.6	1342	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGGTCTTATTTATACAC	NA	False	NA	NA	False	AATAAA	-15	NA	96820127	96826474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_96820336_96825340
ENSMUST00000054343.15	chr7	+	1592	5	FSM	ENSMUSG00000011096.18	ENSMUST00000054343.15	1592	5	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	63.711753232822	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGTGTGTGAGTGTGA	1400	False	NA	19	True	ATTAAA	-24	NA	44498647	44504845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362_44503533_44504015
ENSMUST00000054344.11	chr6	-	4424	18	FSM	ENSMUSG00000035245.13	ENSMUST00000054344.11	4424	18	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	6.4238957016875	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGAACATCTTCAGGAT	NA	False	NA	-6	True	AATAAA	-22	NA	97126143	97086984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837_97125220_97125792
ENSMUST00000054418.12	chr10	+	2981	9	FSM	ENSMUSG00000019864.15	ENSMUST00000054418.12	2981	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_8	16.985287751463	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGTTTTTGGTCACTG	NA	False	NA	8	True	NA	NA	NA	43777802	43823858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43797382_43797432_43804318_43804456_43808358_43808543_43811994_43812088_43822416
ENSMUST00000054442.11	chr16	+	1884	6	FSM	ENSMUSG00000044442.12	ENSMUST00000054442.11	1884	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	18.2931681236466	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGCCTTTGTGTAGC	NA	False	NA	1	True	AATAAA	-26	NA	87151072	87165630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87163026_87163169_87164352
ENSMUST00000054445.9	chr6	+	982	2	FSM	ENSMUSG00000043421.9	ENSMUST00000054445.9	982	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	724	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGTCCTGTTGACATG	1	True	NA	14	True	AATAAA	-21	NA	29272624	29275445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_29272810_29274648
ENSMUST00000054471.10	chr10	-	2564	7	FSM	ENSMUSG00000046567.11	ENSMUST00000054471.10	2564	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	5.07991688470939	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTGAAATAAATCCATGAA	NA	False	NA	69	True	AATAAA	-25	NA	100425257	100408126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_100409623_100411578_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
ENSMUST00000054534.4	chrX	+	1178	3	FSM	ENSMUSG00000051257.4	ENSMUST00000054534.4	1178	3	0	0	0	0	multi-exon	FALSE	canonical	3	2592	junction_2	198.5	13295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGTTTCACGTTAACGT	NA	False	NA	20	True	AATAAA	-21	NA	138234431	138238918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_138235157_138237570_138237800_138238694
ENSMUST00000054536.11	chr12	-	1928	7	FSM	ENSMUSG00000045679.15	ENSMUST00000054536.11	1928	7	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	25.4165300542777	534	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAAGCTGTCATGAATT	NA	False	NA	1	True	AATAAA	-26	NA	17050119	17038648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_17039897_17042278_17042321_17043453_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
ENSMUST00000054538.13	chr4	-	1659	9	FSM	ENSMUSG00000051517.15	ENSMUST00000054538.13	1659	9	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	13.833270582187	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCTGTCTAAATCACG	9051	False	NA	-3	True	AATAAA	-18	NA	43499695	43496141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_43496721_43496820_43496910_43497086_43497317_43497581_43497711_43497958_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
ENSMUST00000054544.7	chr12	-	526	2	FSM	ENSMUSG00000049751.7	ENSMUST00000054544.7	526	2	0	0	0	0	multi-exon	FALSE	canonical	3	5332	junction_1	0	54714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCAAGCCTTGTGTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	69230857	69229514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_69229940_69230756
ENSMUST00000054564.13	chr5	-	1585	10	FSM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	224.611763815799	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGATCGTGTCTGAGGT	4134	False	NA	-7	True	AATAAA	-16	NA	137609638	137603369	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137606878_137606954_137607152_137607412_137608658_137608768_137609498
ENSMUST00000054565.8	chr12	+	773	8	FSM	ENSMUSG00000007867.10	ENSMUST00000054565.8	773	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.4433327353247	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTCTTCCATTCTGTC	NA	False	NA	6	True	AATAAA	-16	NA	86129336	86209232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_86129415_86131867_86131961_86158384_86158450_86186825_86186870_86207922_86207996_86208225_86208302_86208760_86208824_86208951
ENSMUST00000054594.15	chr7	+	1355	8	FSM	ENSMUSG00000019737.15	ENSMUST00000054594.15	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_4	40.5593543401494	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAGAATATCAGTACT	NA	False	NA	11	True	ATTAAA	-18	NA	30014240	30018471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30016267_30016517_30017392_30017468_30018097_30018157_30018248
ENSMUST00000054607.16	chr2	-	2543	10	FSM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	366.363443645113	12804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTCTAAGTACCCTCTG	NA	False	NA	-8	True	AATAAA	-30	NA	154916417	154901229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
ENSMUST00000054622.15	chr2	+	4401	34	FSM	ENSMUSG00000038685.19	ENSMUST00000054622.15	4401	34	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_31	50.0269348938753	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961554	180998409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ENSMUST00000054636.7	chr12	-	2139	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCCCCCTGTGCTGTTC	NA	False	NA	NA	False	CATAAA	-20	NA	111679691	111675921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_111677847_111679477
ENSMUST00000054666.7	chr10	+	834	8	FSM	ENSMUSG00000045193.14	ENSMUST00000054666.7	834	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	141.847863313236	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGACTCTGTGGCTTGG	6191	False	NA	NA	False	AATAAA	-17	NA	80003673	80008620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80008247_80008347_80008470
ENSMUST00000054708.5	chr9	+	2205	9	FSM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	28.7920887571569	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGTGCTCCATTTTC	3774	False	NA	NA	False	AATAAA	-32	NA	44238141	44245197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ENSMUST00000054764.9	chr10	-	2497	4	FSM	ENSMUSG00000049858.9	ENSMUST00000054764.9	2497	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	1.88561808316413	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGAATCTCTTGGGCC	8592	False	NA	-7	True	AATAAA	-18	NA	128509942	128505762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128507796_128507972_128508151_128508407_128508472_128509720
ENSMUST00000054783.5	chr11	+	1189	3	FSM	ENSMUSG00000050538.9	ENSMUST00000054783.5	1189	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAGAATGAATGA	4790	False	NA	NA	False	AATAAA	-2	NA	97731605	97733869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_97731621_97732088_97732403_97733009
ENSMUST00000054829.13	chr5	+	904	7	FSM	ENSMUSG00000029149.15	ENSMUST00000054829.13	904	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	21.1344899788631	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTGATTACAGTT	NA	False	NA	4	True	AATAAA	-16	NA	31409049	31410541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31409159_31409262_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410441
ENSMUST00000054835.15	chr13	+	2111	12	FSM	ENSMUSG00000021694.19	ENSMUST00000054835.15	2111	12	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	12.8281714780819	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTTTCCTTTCCTTGT	NA	False	NA	7	True	ATTAAA	-18	NA	108295271	108331519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ENSMUST00000054857.13	chr4	+	3210	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	17	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTGATTTCTTTGTC	14	True	NA	12	True	AATAAA	-21	NA	5644120	5801101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_5644411_5729570_5729658_5798268
ENSMUST00000054912.15	chr2	+	677	4	FSM	ENSMUSG00000047459.15	ENSMUST00000054912.15	677	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	797.62021037584	4362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTGTTGTGTCTTTA	NA	False	NA	14	True	AGTAAA	-16	NA	155078452	155092192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_155078538_155084654_155084727_155089690_155089859_155091840
ENSMUST00000054920.5	chr4	-	4173	2	FSM	ENSMUSG00000046312.5	ENSMUST00000054920.5	4173	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTGTTGTTTTCTTGCT	8	True	NA	-2	True	NA	NA	NA	41503076	41495603	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41499691_41502990
ENSMUST00000054952.4	chr11	-	1332	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_1	0	1937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGCGCATGGAATTTG	NA	False	NA	-27	True	AATAAA	-25	NA	73067863	73066344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_73067578_73067764
ENSMUST00000054956.15	chr19	+	2024	11	FSM	ENSMUSG00000024776.19	ENSMUST00000054956.15	2024	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	15.5630973780928	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCGGTTGTCACATTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	34169628	34217733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_34170032_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ENSMUST00000055006.12	chr11	+	3906	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_4	2.33238075793812	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTTGCTAGTATTTG	NA	False	NA	NA	False	TTTAAA	-5	NA	62711056	62733762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
ENSMUST00000055009.15	chr9	+	4967	23	FSM	ENSMUSG00000040325.17	ENSMUST00000055009.15	4967	23	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_22	40.9331242535556	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTACCAGGCATTTCT	NA	False	NA	NA	False	TATAAA	-16	NA	106706267	106757637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
ENSMUST00000055018.11	chr4	-	3512	4	FSM	ENSMUSG00000038668.15	ENSMUST00000055018.11	3512	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	72.8941393772885	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	401	False	NA	-5	True	AATAAA	-22	NA	58553357	58435254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553133
ENSMUST00000055071.9	chr12	-	463	4	FSM	ENSMUSG00000079017.4	ENSMUST00000055071.9	463	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.24721912892465	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTGTGGTGGCTCTTT	6294	False	NA	NA	False	AAAACA	-28	NA	103409939	103408425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_103408643_103409090_103409253_103409740_103409771_103409885
ENSMUST00000055077.7	chr8	+	2452	7	FSM	ENSMUSG00000047986.13	ENSMUST00000055077.7	2452	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	39.9110121255887	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATTTATTTATT	NA	False	NA	11	True	ATTAAA	-24	NA	84748099	84756924	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_84748158_84750980_84751030_84752822_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
ENSMUST00000055131.13	chr4	+	5722	28	FSM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_19	271.050863574936	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	570	False	NA	17	True	ATTAAA	-27	NA	137321517	137385842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ENSMUST00000055159.8	chr14	+	1482	2	FSM	ENSMUSG00000043157.9	ENSMUST00000055159.8	1482	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGCATGCATGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	61547201	61549385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_61547387_61548088
ENSMUST00000055213.11	chr4	+	872	6	FSM	ENSMUSG00000028863.14	ENSMUST00000055213.11	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	98.9605982196955	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCAGCTGCCTCTTT	NA	False	NA	40	True	ACTAAA	-16	NA	124978943	125003682	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125003369
ENSMUST00000055226.13	chr1	-	8315	46	FSM	ENSMUSG00000026193.16	ENSMUST00000055226.13	8315	46	0	0	0	0	multi-exon	FALSE	canonical	3	1514	junction_37	371.719226311845	2431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	NA	False	NA	-10	True	AATAAA	-14	NA	71692334	71624682	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ENSMUST00000055244.13	chr2	+	3648	18	FSM	ENSMUSG00000026843.16	ENSMUST00000055244.13	3648	18	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_10	50.5976051514182	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTAGTCTGTTTTGTTT	659	False	NA	29	True	AATAAA	-30	NA	31462828	31507531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ENSMUST00000055245.13	chr5	-	2139	9	FSM	ENSMUSG00000035234.19	ENSMUST00000055245.13	2139	9	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	23.2725025512943	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAATATCTTATTTTT	NA	False	NA	-3	True	AATAAA	-19	NA	100968831	100953057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ENSMUST00000055261.11	chr6	+	4412	6	FSM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_4	40.3554209493595	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTATTATCTACGTC	NA	False	NA	98	True	ATTAAA	-21	NA	83302997	83320758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83303250_83306848_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
ENSMUST00000055327.8	chr4	+	1765	6	Antisense	novelGene_ENSMUSG00000028435.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7862	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGGAGCGCAGGTGGCG	NA	False	NA	NA	False	NA	NA	NA	41092721	41098183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr4_+_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ENSMUST00000055349.15	chr17	+	2741	4	FSM	ENSMUSG00000053347.16	ENSMUST00000055349.15	2741	4	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_3	5.73488351136175	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGTTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181532	22213347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_22181801_22207011_22207083_22209759_22209887_22211072
ENSMUST00000055413.13	chr16	+	1281	3	FSM	ENSMUSG00000071632.11	ENSMUST00000055413.13	1281	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	45.5	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	17	True	ATTAAA	-17	NA	18655327	18658910	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18655370_18655455_18655624_18657839
ENSMUST00000055424.13	chr11	-	606	5	FSM	ENSMUSG00000025144.18	ENSMUST00000055424.13	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_4	137.848422189012	2922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604564	120601767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120604518
ENSMUST00000055506.9	chr7	-	6961	37	FSM	ENSMUSG00000032777.10	ENSMUST00000055506.9	6961	37	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_34	23.9112782676933	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGTATTGGCCTAATG	NA	False	NA	1	True	ATTAAA	-16	NA	125306952	125240125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
ENSMUST00000055528.11	chr7	+	2620	3	FSM	ENSMUSG00000054715.12	ENSMUST00000055528.11	2620	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	9	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTCCTTGTCTGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	12631741	12642166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_12631871_12637527_12638013_12640160
ENSMUST00000055549.4	chr11	-	2602	2	FSM	ENSMUSG00000051650.12	ENSMUST00000055549.4	2602	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATACTAGTATCTTGTAA	3582	False	NA	-18	True	AATAAA	-18	NA	22810488	22784864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_22787196_22810217
ENSMUST00000055575.8	chr4	+	943	2	FSM	ENSMUSG00000050188.9	ENSMUST00000055575.8	943	2	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	0	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGTGCCTGATGCCCTG	NA	False	NA	30	True	CATAAA	-21	NA	125990415	125992377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_125990603_125991621
ENSMUST00000055738.12	chrX	-	1974	3	FSM	ENSMUSG00000031431.14	ENSMUST00000055738.12	1974	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	61	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	AATAAA	-26	NA	139443936	139440276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_139441857_139442853_139442906_139443594
ENSMUST00000055808.6	chr5	-	3520	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	0	0	0	0	multi-exon	FALSE	canonical	3	925	junction_1	0	4417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGCGGTGCCCAGCTTC	NA	False	NA	-26	True	AATAAA	-14	NA	135963453	135937262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_135940506_135963176
ENSMUST00000055820.7	chr9	+	638	2	FSM	ENSMUSG00000079225.4	ENSMUST00000055820.7	638	2	0	0	0	0	multi-exon	FALSE	canonical	3	2455	junction_1	0	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	81559650	81560730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_81559913_81560354
ENSMUST00000055833.12	chr2	-	4210	14	FSM	ENSMUSG00000027104.19	ENSMUST00000055833.12	4210	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_13	80.0395612241018	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTTTTTAATCTGT	NA	False	NA	1	True	AATAAA	-26	NA	73722958	73646852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710724_73722818
ENSMUST00000055844.10	chr9	+	1987	8	FSM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	0	0	0	0	multi-exon	FALSE	canonical	3	1453	junction_4	112.168059042616	2451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGATTTTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	65537840	65567808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ENSMUST00000055858.14	chr7	+	1982	6	FSM	ENSMUSG00000045411.17	ENSMUST00000055858.14	1982	6	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	215.342889364845	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896145	43901743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43896248_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000056078.9	chr7	-	722	3	FSM	ENSMUSG00000045948.9	ENSMUST00000056078.9	722	3	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_2	218	3814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTGCGGTGTCTGT	1644	False	NA	-6	True	AATAAA	-23	NA	28441245	28439066	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28439665_28440911_28440980_28441189
ENSMUST00000056108.12	chr2	+	1618	7	FSM	ENSMUSG00000047909.12	ENSMUST00000056108.12	1618	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	18.7742435858871	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	4768	False	NA	33	True	AATAAA	-35	NA	11783301	11795136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_11783714_11784487_11784709_11786287_11786331_11788451_11788561_11789101_11789264_11791034_11791114_11794544
ENSMUST00000056147.14	chr17	-	1889	4	FSM	ENSMUSG00000062101.13	ENSMUST00000056147.14	1889	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	5.90668171555645	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATATTTATGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	56252259	56245380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56246994_56247928_56247990_56248185_56248313_56252171
ENSMUST00000056228.8	chr12	-	1346	2	FSM	ENSMUSG00000044408.8	ENSMUST00000056228.8	1346	2	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	0	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTCTTTTATGGTTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	54703358	54692176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_54693321_54703156
ENSMUST00000056232.7	chr7	+	3043	2	FSM	ENSMUSG00000045598.11	ENSMUST00000056232.7	3043	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGGTTATGTGTA	8302	False	NA	28	True	AATAAA	-18	NA	126832426	126837215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_126832690_126834435
ENSMUST00000056292.8	chr3	+	1655	4	FSM	ENSMUSG00000048100.14	ENSMUST00000056292.8	1655	4	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	76.856287243718	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTGAGTTTGTGTTTGC	NA	False	NA	14	True	AATAAA	-23	NA	108479014	108489385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_108479430_108480195_108480275_108485431_108485530_108488322
ENSMUST00000056370.13	chr3	-	1007	5	FSM	ENSMUSG00000028066.16	ENSMUST00000056370.13	1007	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	377.05205210952	3853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCTGTGAGGAGGTTT	NA	False	NA	-6	True	AATAAA	-16	NA	88317638	88301449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_88301878_88303211_88303408_88306441_88306543_88307017_88307124_88317462
ENSMUST00000056391.15	chr19	+	2975	9	FSM	ENSMUSG00000024947.18	ENSMUST00000056391.15	2975	9	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_3	26.9153766460735	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	614	False	NA	21	True	GATAAA	-21	NA	6385068	6390919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ENSMUST00000056398.11	chr6	+	807	4	FSM	ENSMUSG00000044155.12	ENSMUST00000056398.11	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	968	junction_1	14.522013940528	6609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCTTTTCTTTCCT	1	True	NA	17	True	AATAAA	-17	NA	18848577	18854052	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_18848763_18849624_18849666_18851634_18851763_18853599
ENSMUST00000056410.11	chrX	+	1862	4	FSM	ENSMUSG00000040621.15	ENSMUST00000056410.11	1862	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	17.1529071070248	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGACTGGATTTGATCTAC	NA	False	NA	NA	False	NA	NA	NA	164953449	164973508	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_164953547_164961787_164961827_164963348_164963806_164972239
ENSMUST00000056427.10	chr13	-	1610	4	FSM	ENSMUSG00000058672.8	ENSMUST00000056427.10	1610	4	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_2	19.2006944318862	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCCTTTTCTCTTCAACA	NA	False	NA	NA	False	AATAAA	-22	NA	34261990	34258256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_34259512_34260160_34260272_34260531_34260641_34261855
ENSMUST00000056458.14	chr4	-	757	10	FSM	ENSMUSG00000060288.14	ENSMUST00000056458.14	757	10	0	0	0	0	multi-exon	TRUE	canonical	2	32	junction_8	169.629516415942	3006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9644	False	NA	-3	True	AATAAA	-19	NA	119177681	119157206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_119157400_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
ENSMUST00000056470.10	chr13	-	3334	4	FSM	ENSMUSG00000055560.9	ENSMUST00000056470.10	3334	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	6.23609564462324	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTAATTTGTGTAAAAAAC	NA	False	NA	-4	True	NA	NA	NA	67569537	67553827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67556862_67561226_67561323_67561952_67562080_67569460
ENSMUST00000056521.12	chr16	+	2394	6	FSM	ENSMUSG00000044117.13	ENSMUST00000056521.12	2394	6	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_1	4.9152822909778	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTTCAAGATATTTG	NA	False	NA	NA	False	NA	NA	NA	13804467	13919364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13804758_13867246_13867371_13906809_13906884_13911752_13911868_13913767_13913851_13917656
ENSMUST00000056549.9	chr7	+	3373	4	FSM	ENSMUSG00000047603.10	ENSMUST00000056549.9	3373	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	6.18241233033047	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTTTCTCATCCTTT	NA	False	NA	6	True	AATAAA	-14	NA	23833666	23842666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_23833913_23834682_23834741_23836470_23836598_23839724
ENSMUST00000056710.10	chr3	+	1601	7	FSM	ENSMUSG00000015750.16	ENSMUST00000056710.10	1601	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_6	85.2670641116617	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAGGACTTTATAAT	NA	False	NA	-20	True	NA	NA	NA	95801366	95804757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548_95803673_95804005
ENSMUST00000056888.13	chr19	-	2139	15	FSM	ENSMUSG00000005986.17	ENSMUST00000056888.13	2139	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.70128076340124	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGCTGTCCTGCGTGGT	860	False	NA	-5	True	AATAAA	-17	NA	4333163	4320207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4320578_4320821_4320914_4320993_4321158_4321246_4321364_4321469_4321628_4322597_4322729_4322827_4322890_4323048_4323131_4323563_4323631_4330564_4330755_4330964_4331109_4331190_4331237_4331945_4332071_4332196_4332333_4332908
ENSMUST00000056937.12	chr5	-	804	6	FSM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_3	42.8691030930203	2493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTAATTGGAAATAGATAT	NA	False	NA	3	True	AATAAA	-24	NA	110987643	110976935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_110977078_110978801_110978850_110982520_110982666_110983845_110983936_110984172_110984270_110987361
ENSMUST00000056965.12	chr4	-	1163	6	FSM	ENSMUSG00000055401.15	ENSMUST00000056965.12	1163	6	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_5	262.901958912443	1938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	-18	True	AATAAA	-16	NA	148236516	148230244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236398
ENSMUST00000056997.15	chr14	-	2202	10	FSM	ENSMUSG00000021982.15	ENSMUST00000056997.15	2202	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	34.1362556619393	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAACAAATAAAATGTTA	NA	False	NA	-32	True	NA	NA	NA	59835393	59801424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_59802045_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ENSMUST00000057062.12	chr1	-	3430	14	FSM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	13.1918030852137	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTGGATTTATGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	183078536	183057915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078446
ENSMUST00000057089.13	chr11	+	3118	4	FSM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_3	67.6576348652209	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	6452	False	NA	14	True	ATTAAA	-16	NA	3240438	3259083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647
ENSMUST00000057115.7	chr13	-	1942	4	FSM	ENSMUSG00000044792.8	ENSMUST00000057115.7	1942	4	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_3	1.63299316185545	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTCCTTTTCTTGTTGG	NA	False	NA	3	True	ATTAAA	-23	NA	59917624	59903222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_59904818_59906703_59906810_59910555_59910610_59917437
ENSMUST00000057177.7	chr15	+	601	4	FSM	ENSMUSG00000045996.13	ENSMUST00000057177.7	601	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	282.916948944385	6561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCTATTCAATGTCTT	132	False	NA	NA	False	ATTAAA	-15	NA	36174178	36177156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_36174360_36175132_36175203_36175529_36175623_36176899
ENSMUST00000057195.17	chr7	+	2722	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	0	0	0	0	multi-exon	FALSE	canonical	3	986	junction_1	0	2536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTGAGTATGGGTAG	75	False	NA	21	True	AATAAA	-21	NA	44465511	44480236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44465908_44477910
ENSMUST00000057208.13	chr1	+	1418	11	FSM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_3	42.3685024517034	2937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCCCTTTTTTTTTAAA	NA	False	NA	14	True	AATAAA	-16	NA	42890392	42944842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ENSMUST00000057216.15	chr2	+	1047	13	FSM	ENSMUSG00000027282.18	ENSMUST00000057216.15	1047	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	948.923465330875	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGATTGGTGTCTGCCTT	228	False	NA	51	True	NA	NA	NA	90677630	90695735	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_90677708_90679714_90679800_90679941_90680049_90683159_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUST00000057256.5	chr15	-	3966	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAACAAAAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	12824735	12808262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ENSMUST00000057288.7	chr12	+	2175	13	FSM	ENSMUSG00000020571.14	ENSMUST00000057288.7	2175	13	0	0	0	0	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	6043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTCTGTGATTATCTTC	NA	False	NA	NA	False	AATAAA	-12	NA	17316545	17334771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ENSMUST00000057330.15	chr11	+	2290	17	FSM	ENSMUSG00000018395.20	ENSMUST00000057330.15	2290	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	19.4950915296646	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAGAGAACTCCTTAAT	919	False	NA	21	True	AATAAA	-18	NA	53458205	53491932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484200_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ENSMUST00000057421.15	chr6	-	1584	3	FSM	ENSMUSG00000048668.17	ENSMUST00000057421.15	1584	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	149.5	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCTCGTGCCCATCTA	474	False	NA	-7	True	AATAAA	-41	NA	128339831	128334322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_128335157_128336068_128336318_128339330
ENSMUST00000057454.4	chr2	+	645	3	FSM	ENSMUSG00000046814.4	ENSMUST00000057454.4	645	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	2.5	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTGTGCAGTGACTC	1208	False	NA	20	True	AATAAA	-27	NA	118998253	119002871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_118998355_119000156_119000252_119002422
ENSMUST00000057486.9	chr15	-	2509	5	FSM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_4	35.6195171219375	823	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATCGGCCATTTTCTTA	NA	False	NA	NA	False	AATAAA	-18	NA	36496966	36477813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_36479620_36484126_36484286_36485940_36486274_36496022_36496140_36496872
ENSMUST00000057495.10	chr13	+	2857	12	FSM	ENSMUSG00000035762.12	ENSMUST00000057495.10	2857	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	57.0470300398157	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATACAATAAGAG	NA	False	NA	NA	False	NA	NA	NA	84370418	84444260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ENSMUST00000057500.6	chr9	-	1232	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	0	0	0	0	multi-exon	FALSE	canonical	3	1085	junction_1	10	7364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTCTTTATTTGGCGGT	3713	False	NA	0	True	ATTAAA	-35	NA	96360728	96352989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_96353906_96356010_96356059_96360460
ENSMUST00000057551.14	chr5	-	1906	8	FSM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_4	44.1837535937436	1579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCCTATACTGTTTGG	NA	False	NA	-4	True	AATAAA	-22	NA	33809918	33797398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
ENSMUST00000057578.16	chr6	+	2283	9	FSM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	132.149477392081	1480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCGTTATTTCTGT	NA	False	NA	12	True	AATAAA	-21	NA	106746126	106759435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ENSMUST00000057623.14	chr10	-	3531	12	FSM	ENSMUSG00000062075.14	ENSMUST00000057623.14	3531	12	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_8	24.5238962565761	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGC	3111	False	NA	NA	False	NA	NA	NA	80754079	80737036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ENSMUST00000057627.16	chr2	-	4012	3	FSM	ENSMUSG00000047030.16	ENSMUST00000057627.16	4012	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	1	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCCGAAGATTTTTTTC	4582	False	NA	NA	False	ATTAAA	-17	NA	167334807	167323052	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_167326500_167327077_167327514_167334678
ENSMUST00000057649.8	chr10	+	563	1	FSM	ENSMUSG00000045886.8	ENSMUST00000057649.8	563	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6563	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	43400079	43400642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_43400100_43400600
ENSMUST00000057652.7	chr7	+	2744	3	FSM	ENSMUSG00000058402.15	ENSMUST00000057652.7	2744	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	17.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAATGTGTAGTTTTGTG	NA	False	NA	NA	False	GATAAA	-19	NA	29559465	29576252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_29559519_29572316_29572359_29573603
ENSMUST00000057716.6	chr19	-	784	5	FSM	ENSMUSG00000050623.6	ENSMUST00000057716.6	784	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	4.76969600708473	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTGCGTGGCTGCTTGC	7390	False	NA	1	True	ATTAAA	-22	NA	6902748	6899790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6900029_6900668_6900736_6900890_6900968_6902161_6902475_6902659
ENSMUST00000057795.12	chr5	-	2270	11	FSM	ENSMUSG00000029422.16	ENSMUST00000057795.12	2270	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	167.947640650293	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCCATTGTATGCTAT	4323	False	NA	NA	False	AATAAA	-11	NA	123887475	123866492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123887351
ENSMUST00000057816.15	chr2	-	1849	15	FSM	ENSMUSG00000089917.8	ENSMUST00000057816.15	1849	15	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_14	14.4936650482413	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTGTGGCAGAATGTAACC	4547	False	NA	1	True	AATAAA	-23	NA	181223801	181210941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214262_181214280_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ENSMUST00000057829.4	chr4	-	2114	2	FSM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	0	0	0	0	multi-exon	FALSE	canonical	3	1281	junction_1	0	2929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTTTAAAGTGTTATT	NA	False	NA	0	True	AATAAA	-21	NA	49521093	49512595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_49514578_49520961
ENSMUST00000057884.6	chr11	+	1220	10	FSM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_9	31.9443961352292	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCCTGAGTGCTGTTTA	4233	False	NA	12	True	AATAAA	-22	NA	69805017	69807417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ENSMUST00000057885.13	chr5	-	738	8	FSM	ENSMUSG00000047215.15	ENSMUST00000057885.13	738	8	0	0	0	0	multi-exon	FALSE	canonical	3	5084	junction_7	3201.89202994551	130946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548787	65545706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ENSMUST00000057907.10	chr4	-	1829	6	FSM	ENSMUSG00000029001.16	ENSMUST00000057907.10	1829	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	3.00665927567458	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCCCTGCGGCTTT	NA	False	NA	-6	True	AATAAA	-13	NA	148244540	148237259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148238102_148240602_148240739_148240851_148240948_148241036_148241164_148242993_148243281_148244199
ENSMUST00000057921.10	chr11	+	2242	5	FSM	ENSMUSG00000062421.14	ENSMUST00000057921.10	2242	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	7.43303437365925	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCATGTTCTCCTGGA	NA	False	NA	31	True	AATAAA	-20	NA	103857564	103876163	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_103857654_103859904_103860072_103863778_103863890_103872519_103872645_103874413
ENSMUST00000057975.8	chr3	+	2433	2	FSM	ENSMUSG00000051444.10	ENSMUST00000057975.8	2433	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCCATTCTGTTTTTT	1251	False	NA	7	True	AATAAA	-19	NA	37366702	37375599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_37366735_37373198
ENSMUST00000058011.8	chr6	-	3371	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	0	0	0	0	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	2615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88875762	88860455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ENSMUST00000058098.15	chrX	-	4797	11	FSM	ENSMUSG00000046873.19	ENSMUST00000058098.15	4797	11	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_9	30.3809150619266	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTCTGTATCATATTT	NA	False	NA	-5	True	AATAAA	-35	NA	156381711	156330819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ENSMUST00000058125.9	chrX	-	866	3	FSM	ENSMUSG00000050071.9	ENSMUST00000058125.9	866	3	0	0	0	0	multi-exon	FALSE	canonical	3	4595	junction_1	588.5	31623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTACTCATCTTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	135116262	135114720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135115333_135115652_135115730_135116085
ENSMUST00000058163.11	chr11	+	3559	18	FSM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	15.9356404539699	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616006	23682876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ENSMUST00000058230.13	chr3	+	1130	4	FSM	ENSMUSG00000038619.13	ENSMUST00000058230.13	1130	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	204.491781959298	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACCAAAACTAGACCT	400	False	NA	10	True	AATAAA	-21	NA	95532321	95539413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95532488_95534059_95534186_95535851_95536019_95538742
ENSMUST00000058245.5	chr6	+	918	5	FSM	ENSMUSG00000040242.15	ENSMUST00000058245.5	918	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	170.445005793658	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGTGTGCTTTTCATGGC	NA	False	NA	NA	False	AATAAA	-16	NA	146479418	146494363	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131
ENSMUST00000058265.8	chrX	-	1449	2	FSM	ENSMUSG00000048970.10	ENSMUST00000058265.8	1449	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTATTACTTTTCTGT	NA	False	NA	-2	True	ATTAAA	-18	NA	37723964	37719661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_37721001_37723854
ENSMUST00000058333.10	chr7	+	694	4	FSM	ENSMUSG00000089847.9	ENSMUST00000058333.10	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	126.499011853848	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTGCTTTCTTGTCT	NA	False	NA	NA	False	AATAAA	-11	NA	105289654	105291050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_105289830_105289968_105290065_105290234_105290436_105290828
ENSMUST00000058351.16	chr4	+	2371	11	FSM	ENSMUSG00000025791.19	ENSMUST00000058351.16	2371	11	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_5	14.102836594104	484	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTCGCTTTTATTC	NA	False	NA	16	True	ATTAAA	-19	NA	99786610	99844491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841301_99843871
ENSMUST00000058393.9	chr4	+	1098	4	FSM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_1	42.5519290592879	2954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTTCACAAAAGTGT	NA	False	NA	NA	False	AATAAA	-29	NA	154041693	154046382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_154041780_154044205_154044320_154044987_154045450_154045946
ENSMUST00000058407.6	chr11	-	434	2	FSM	ENSMUSG00000059534.9	ENSMUST00000058407.6	434	2	0	0	0	0	multi-exon	FALSE	canonical	3	8152	junction_1	0	31501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTTTTGCACGAGTCCT	NA	False	NA	-6	True	AATAAA	-19	NA	4654342	4651972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_4652221_4654156
ENSMUST00000058437.14	chr1	-	1163	7	FSM	ENSMUSG00000043716.14	ENSMUST00000058437.14	1163	7	0	0	0	0	multi-exon	FALSE	canonical	3	5309	junction_1	773.772953348289	112208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174886	16171518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ENSMUST00000058488.9	chr9	-	1346	3	FSM	ENSMUSG00000032353.10	ENSMUST00000058488.9	1346	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	7.5	519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGGAGTGATGTGTGC	NA	False	NA	-12	True	AATAAA	-14	NA	89587121	89581258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_89582033_89584824_89585074_89586798
ENSMUST00000058639.11	chr12	-	1109	6	FSM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	23.3837550449024	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGAAGCAGCATGGTTGG	NA	False	NA	-5	True	AATAAA	-24	NA	69629884	69624401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
ENSMUST00000058659.9	chr15	-	1144	2	FSM	ENSMUSG00000044986.11	ENSMUST00000058659.9	1144	2	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	0	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTGCCTCCTTGCCC	8084	False	NA	-3	True	AATAAA	-17	NA	78290107	78283755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_78284231_78289438
ENSMUST00000058714.10	chr10	+	1816	2	FSM	ENSMUSG00000047139.10	ENSMUST00000058714.10	1816	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGTCTGTTGAATTTAT	NA	False	NA	10	True	AATAAA	-19	NA	43455164	43460261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_43455319_43458599
ENSMUST00000058716.14	chr5	+	4134	23	FSM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_7	179.419817953258	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186391	139235595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUST00000058745.15	chr7	-	3691	13	FSM	ENSMUSG00000046179.18	ENSMUST00000058745.15	3691	13	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_12	14.9024606469312	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATTTTCATTTGGCC	NA	False	NA	-1	True	ATTAAA	-17	NA	48530789	48516176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
ENSMUST00000058746.7	chr7	+	1619	7	FSM	ENSMUSG00000025510.15	ENSMUST00000058746.7	1619	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	95.130465969402	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCGAATCAGCTTGCTG	710	False	NA	7	True	NA	NA	NA	141048734	141051385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_141048810_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUST00000058754.9	chr4	-	3429	10	FSM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	24.0005143977796	530	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGGTGTTGGGTTTGA	NA	False	NA	-1	True	ATTAAA	-20	NA	120955438	120916433	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
ENSMUST00000058771.13	chr7	+	2898	3	FSM	ENSMUSG00000043831.13	ENSMUST00000058771.13	2898	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	19.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACATGATTCTCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	66872355	66878204	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_66872378_66873356_66873640_66875611
ENSMUST00000058790.12	chr2	-	3833	6	FSM	ENSMUSG00000048058.18	ENSMUST00000058790.12	3833	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	7.56306816047562	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCGTGTGAATGGTTCT	NA	False	NA	-2	True	AATAAA	-18	NA	102016730	101780547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_101783521_101785173_101785520_101888251_101888387_101900277_101900404_101943877_101944025_102016624
ENSMUST00000058793.14	chr15	-	3299	9	FSM	ENSMUSG00000041815.15	ENSMUST00000058793.14	3299	9	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_6	74.2839779158332	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCTATAATGTCTTT	NA	False	NA	-11	True	AATAAA	-17	NA	83033585	83010176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
ENSMUST00000058884.10	chr16	-	2906	24	FSM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	0	0	0	0	multi-exon	FALSE	canonical	1	121	junction_21	52.0035988284976	924	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCTTTAACTGTTCTT	NA	False	NA	-7	True	ATTAAA	-16	NA	13486034	13355823	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
ENSMUST00000058905.8	chr4	+	2191	2	FSM	ENSMUSG00000043572.8	ENSMUST00000058905.8	2191	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGTGTGTGTGTGTG	NA	False	NA	5	True	AATAAA	-20	NA	106508302	106512479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_106508329_106510314
ENSMUST00000058914.10	chr15	+	1982	4	FSM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_1	4660.1984459415	12623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCATCTGGTTCATA	NA	False	NA	15	True	AATAAA	-22	NA	98927771	98935991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_98928306_98931974_98932198_98932329_98932479_98934915
ENSMUST00000058978.9	chr13	+	3842	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCCTCTCATTTATATC	NA	False	NA	14	True	ATTAAA	-18	NA	34148669	34172426	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ENSMUST00000058981.3	chr3	-	1112	6	FSM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_4	5.56417109729742	475	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAGTCTAATTGCATTGTA	NA	False	NA	-3	True	AATAAA	-18	NA	67371259	67365330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_67365661_67365926_67365990_67368254_67368392_67368644_67368823_67369691_67369755_67370918
ENSMUST00000059021.10	chr3	-	1749	5	FSM	ENSMUSG00000040374.14	ENSMUST00000059021.10	1749	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	14.3592304807744	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGTGCATTTATTTTT	NA	False	NA	0	True	AATAAA	-20	NA	5641299	5625559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5641097
ENSMUST00000059045.8	chr15	+	1796	3	FSM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	330.5	1588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGACTAATGTCTTCTTT	879	False	NA	8	True	NA	NA	NA	76211596	76214877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76211864_76213229_76213437_76213555
ENSMUST00000059080.7	chr2	+	394	6	FSM	ENSMUSG00000039001.13	ENSMUST00000059080.7	394	6	0	0	0	0	multi-exon	FALSE	canonical	3	3954	junction_5	1417.02976680097	182051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTTGCTGTTTTTAC	NA	False	NA	26	True	AATAAA	-27	NA	179899169	179900238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
ENSMUST00000059093.7	chr8	+	747	2	FSM	ENSMUSG00000051671.8	ENSMUST00000059093.7	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	1203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGCGTGCTTCTGGCA	NA	False	NA	7	True	AATAAA	-18	NA	127149253	127152172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_127149570_127151741
ENSMUST00000059099.7	chrX	-	1041	7	FSM	ENSMUSG00000015668.14	ENSMUST00000059099.7	1041	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	158.307366291724	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATAAACGTGGCTTGAG	NA	False	NA	-29	True	AGTAAA	-10	NA	99669541	99666513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669421
ENSMUST00000059145.14	chr7	+	3906	21	FSM	ENSMUSG00000030852.19	ENSMUST00000059145.14	3906	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	141.777783873215	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130179213	130366514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_130179247_130203566_130203668_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130333260_130333297_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130346256_130346347_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUST00000059155.11	chr5	+	2697	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_2	41.7215471908701	628	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	14	True	ATTAAA	-13	NA	28276360	28283660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
ENSMUST00000059193.7	chr13	-	3336	2	FSM	ENSMUSG00000048376.7	ENSMUST00000059193.7	3336	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCATGCTTGGTGTCTG	NA	False	NA	NA	False	AATAAA	-3	NA	95754995	95738310	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_95741446_95754794
ENSMUST00000059229.16	chr5	-	2044	6	FSM	ENSMUSG00000029500.17	ENSMUST00000059229.16	2044	6	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_2	111.169420255752	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATTTGTTTTAAAGGG	NA	False	NA	-20	True	AATAAA	-18	NA	110417753	110407020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_110408304_110413377_110413509_110413605_110413695_110413776_110413903_110414952_110415132_110417517
ENSMUST00000059270.10	chr13	+	6780	45	FSM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_14	60.7064258923889	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGGTATTTGTCTTTA	1714	False	NA	5	True	AGTAAA	-19	NA	12410251	12453774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ENSMUST00000059297.6	chrX	+	2364	4	FSM	ENSMUSG00000045427.14	ENSMUST00000059297.6	2364	4	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_3	339.283886377699	1586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCTTGCATAGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	133502034	133507803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133502083_133503440_133503512_133503666_133503712_133505603
ENSMUST00000059354.15	chr4	-	1640	4	FSM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_2	54.2647829320883	1819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTTCCTTATGTGTCTAA	3747	False	NA	NA	False	AATAAA	-17	NA	41741359	41738492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41739581_41740549_41740643_41740775_41740977_41741101
ENSMUST00000059433.8	chr15	+	2185	6	FSM	ENSMUSG00000044250.9	ENSMUST00000059433.8	2185	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.31516738055805	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTGTTTCCAAAAGTG	NA	False	NA	10	True	AATAAA	-11	NA	97144987	97283557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_97145046_97175214_97175298_97177731_97177797_97259080_97259217_97271836_97272031_97281908
ENSMUST00000059462.12	chr6	+	2654	6	FSM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_5	32.5490399243972	2176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATATTATGCCTTTG	NA	False	NA	23	True	NA	NA	NA	71520780	71558563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ENSMUST00000059472.10	chr6	-	2804	9	FSM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_1	84.6271233116192	2019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416541	72409781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ENSMUST00000059515.8	chr13	+	2077	10	FSM	ENSMUSG00000021218.11	ENSMUST00000059515.8	2077	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	614.94494383694	2284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGGTATTGAGTGTCT	NA	False	NA	35	True	AATAAA	-18	NA	3588129	3615820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_3588344_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ENSMUST00000059582.9	chr19	-	999	5	FSM	ENSMUSG00000024667.13	ENSMUST00000059582.9	999	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	20.6079474960511	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTTTAATAAAAGTAT	NA	False	NA	-34	True	NA	NA	NA	10533115	10527855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533062
ENSMUST00000059642.17	chr7	-	1540	7	FSM	ENSMUSG00000030591.18	ENSMUST00000059642.17	1540	7	0	0	0	0	multi-exon	FALSE	canonical	3	1581	junction_5	143.933626678719	5405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGTGTATCCAGTCTG	NA	False	NA	-10	True	AATAAA	-15	NA	28880126	28873612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
ENSMUST00000059658.6	chr10	-	1221	7	FSM	ENSMUSG00000050157.7	ENSMUST00000059658.6	1221	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	10.6991692304694	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAATTATGTCTCCTGT	4916	False	NA	NA	False	AGTAAA	-42	NA	75776506	75773556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_75774191_75774995_75775166_75775239_75775315_75775553_75775673_75775764_75775852_75776227_75776255_75776397
ENSMUST00000059692.4	chr8	-	1850	6	FSM	ENSMUSG00000031651.6	ENSMUST00000059692.4	1850	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	54.3963234051714	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTATTGCTTTCTG	9272	False	NA	0	True	TATAAA	-19	NA	43594523	43582843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43594003
ENSMUST00000059743.12	chr1	+	1154	11	FSM	ENSMUSG00000034343.15	ENSMUST00000059743.12	1154	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	126.177692164661	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTGGCAATAAGAAACCC	311	False	NA	NA	False	NA	NA	NA	91178032	91213462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_91178160_91181481_91181550_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUST00000059775.15	chr17	-	1631	3	FSM	ENSMUSG00000047407.18	ENSMUST00000059775.15	1631	3	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_2	253.5	1988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGCATTTTCTTGAAG	NA	False	NA	84	True	AATAAA	-26	NA	71158202	71151199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_71152268_71153166_71153394_71157866
ENSMUST00000059802.7	chr9	+	710	4	FSM	ENSMUSG00000048758.15	ENSMUST00000059802.7	710	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2185.50085792708	111455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGTCTGTTGTCATA	NA	False	NA	2	True	AATAAA	-18	NA	106306737	106308766	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_106306839_106307168_106307214_106307506_106307572_106308267
ENSMUST00000059844.13	chr17	-	1908	6	FSM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_4	48.1730214954387	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAAAGGGGTTTTGACC	NA	False	NA	33	True	NA	NA	NA	47063140	47046630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
ENSMUST00000059899.3	chrX	-	4234	4	FSM	ENSMUSG00000061273.4	ENSMUST00000059899.3	4234	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	4.64279609239471	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTGTTTGGTAGTGG	NA	False	NA	-7	True	AATAAA	-14	NA	55643429	55630871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_55634664_55636437_55636542_55640749_55640803_55643144
ENSMUST00000059954.14	chr2	-	1809	16	FSM	ENSMUSG00000017754.14	ENSMUST00000059954.14	1809	16	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_15	32.6696597268271	2284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	False	NA	-1	True	NA	NA	NA	164699631	164681437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503
ENSMUST00000059970.9	chr14	-	2263	12	FSM	ENSMUSG00000034450.9	ENSMUST00000059970.9	2263	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	1.97086212624353	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTGCCCTTGAGGAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	66246656	66224234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_66225144_66225630_66225722_66227827_66227993_66228478_66228629_66234272_66234350_66235008_66235117_66237282_66237469_66240039_66240131_66241530_66241626_66243285_66243412_66245487_66245590_66246493
ENSMUST00000059980.11	chr1	-	558	4	Antisense	novelGene_ENSMUSG00000046330.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	187000	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGACGCAATGCGCATG	NA	False	NA	NA	False	NA	NA	NA	72752972	72750448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr1_-_72750483_72750830_72750960_72751300_72751384_72752660
ENSMUST00000059983.10	chr6	-	820	3	FSM	ENSMUSG00000050732.10	ENSMUST00000059983.10	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	0.5	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGCGCTTTACTCCTGTG	8093	False	NA	-18	True	AATAAA	-25	NA	72367686	72362205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72362637_72365244_72365404_72367456
ENSMUST00000060049.8	chr5	-	2073	5	FSM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_4	45.778679535347	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTTTTTGTTTTT	9954	False	NA	0	True	NA	NA	NA	34326871	34311223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748_34325788_34326733
ENSMUST00000060067.12	chr16	+	2648	12	FSM	ENSMUSG00000004069.18	ENSMUST00000060067.12	2648	12	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_10	248.960018695956	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	35	True	TTTAAA	-8	NA	4501933	4525559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4523707_4523825_4524431
ENSMUST00000060092.13	chr2	+	5174	22	FSM	ENSMUSG00000043241.15	ENSMUST00000060092.13	5174	22	0	0	0	0	multi-exon	TRUE	canonical	3	171	junction_5	24.2975694686972	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTTGTTTTATTTGGT	1678	False	NA	17	True	AATAAA	-21	NA	5956279	6061514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
ENSMUST00000060101.10	chrX	-	1250	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	0	0	0	0	multi-exon	FALSE	canonical	3	703	junction_2	29	3473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGGTTAAGACTTGGTC	NA	False	NA	NA	False	NA	NA	NA	135073091	135070829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135071799_135072384_135072455_135072880
ENSMUST00000060108.7	chrX	-	2699	7	FSM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_4	24.9377001523575	808	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTACAGTTTTTAATTTC	NA	False	NA	-3	True	AATAAA	-25	NA	12539907	12521117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
ENSMUST00000060212.13	chr10	+	2007	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTTCCCTCATATTCA	NA	False	NA	38	True	AATGAA	-24	NA	13376744	13391287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
ENSMUST00000060214.10	chr4	-	1864	4	FSM	ENSMUSG00000050854.10	ENSMUST00000060214.10	1864	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.18993502999218	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTCTGCACCATGGCA	8325	False	NA	NA	False	AATAAA	-23	NA	118400925	118398137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_118399569_118399797_118399958_118400552_118400697_118400796
ENSMUST00000060226.11	chr5	+	2074	4	FSM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	0	0	0	0	multi-exon	FALSE	canonical	3	3477	junction_2	89.3395520223577	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTTTTATATTAATG	NA	False	NA	12	True	AATAAA	-22	NA	124678757	124688569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143
ENSMUST00000060265.6	chr5	-	3424	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGTGAGTTAATAACAT	NA	False	NA	-3	True	AATAAA	-19	NA	97540238	97530056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_97532729_97539486
ENSMUST00000060301.6	chr15	-	791	4	FSM	ENSMUSG00000044678.12	ENSMUST00000060301.6	791	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	10.2740233382816	651	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTTGGTTTGACTTCTG	776	False	NA	-2	True	ATTAAA	-18	NA	74671835	74668722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_74669121_74670383_74670483_74671267_74671345_74671618
ENSMUST00000060315.12	chr7	+	2590	8	FSM	ENSMUSG00000056144.15	ENSMUST00000060315.12	2590	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5.3642809587196	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGAATCTGTTCATT	NA	False	NA	7	True	ATTAAA	-15	NA	103893665	103911441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_103893814_103896737_103897358_103897893_103897990_103898601_103898833_103908619_103908643_103909324_103909426_103909684_103909712_103910097
ENSMUST00000060389.10	chr8	+	3852	15	FSM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	22.9280151245375	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTCACAGCTCTCATT	8111	False	NA	8	True	AATAAA	-25	NA	95328564	95386903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ENSMUST00000060419.2	chr4	-	1445	2	FSM	ENSMUSG00000046623.9	ENSMUST00000060419.2	1445	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTAGTCAGGCGGAGAA	4504	False	NA	-10	True	AATAAA	-17	NA	127247874	127244878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_127246275_127247825
ENSMUST00000060433.10	chr7	+	1519	3	FSM	ENSMUSG00000045752.14	ENSMUST00000060433.10	1519	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	1	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	22	True	AATAAA	-21	NA	142622985	142624830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_142623251_142623491_142623588_142623672
ENSMUST00000060447.13	chr2	-	968	7	FSM	ENSMUSG00000051730.16	ENSMUST00000060447.13	968	7	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_3	75.5058864519111	2227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCATTTTCTCTTTTCTT	6806	False	NA	-5	True	AATAAA	-34	NA	69715959	69701541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69709445_69709529_69711110_69711293_69711640_69711756_69715592
ENSMUST00000060455.15	chr2	+	1569	11	FSM	ENSMUSG00000023572.17	ENSMUST00000060455.15	1569	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_6	15.0811140172071	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTCCTCTGAAGT	NA	False	NA	21	True	AATAAA	-30	NA	120838883	120847385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_120839091_120839198_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
ENSMUST00000060481.9	chrX	-	3509	2	FSM	ENSMUSG00000045284.10	ENSMUST00000060481.9	3509	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCTCTGTTTTTCTTTA	NA	False	NA	-5	True	AATAAA	-40	NA	43879074	43875446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_43877171_43877289
ENSMUST00000060501.5	chr4	-	852	3	FSM	ENSMUSG00000044303.7	ENSMUST00000060501.5	852	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATTTTTAGCATAGAAAT	NA	False	NA	-3	True	AATAAA	-26	NA	89200429	89192707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_89193012_89194881_89195223_89200222
ENSMUST00000060513.8	chr9	-	2859	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTATTTTCATGTT	9248	False	NA	NA	False	AGTAAA	-25	NA	26910845	26885439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
ENSMUST00000060608.13	chr1	+	2223	13	FSM	ENSMUSG00000049439.14	ENSMUST00000060608.13	2223	13	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	9.38083151964686	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGATTGTTTTGTTT	NA	False	NA	28	True	AATAAA	-16	NA	60382481	60427219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_60382617_60391279_60391330_60392067_60392235_60393672_60393816_60402348_60402517_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
ENSMUST00000060634.14	chr6	-	1224	9	FSM	ENSMUSG00000051169.15	ENSMUST00000060634.14	1224	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	50.3374549912885	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAGCAGATGTTTACC	NA	False	NA	-18	True	AATAAA	-32	NA	113396280	113392289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_113392684_113393267_113393394_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
ENSMUST00000060645.13	chr2	-	1586	3	FSM	ENSMUSG00000078923.11	ENSMUST00000060645.13	1586	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1070	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGTGGTTTTATTTTAA	9441	False	NA	NA	False	AATAAA	-22	NA	167473892	167449763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_167451168_167459748_167459898_167473859
ENSMUST00000060710.9	chr18	-	1945	15	FSM	ENSMUSG00000044201.11	ENSMUST00000060710.9	1945	15	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_14	20.2922524674833	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGATGTCTCTAAGCC	2792	False	NA	-15	True	AATAAA	-22	NA	34884586	34866045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ENSMUST00000060738.9	chr3	-	677	3	FSM	ENSMUSG00000044080.10	ENSMUST00000060738.9	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	21.5	1248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATGTCTGTACCCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	90421699	90418340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90418672_90419302_90419457_90421507
ENSMUST00000060833.14	chr1	+	2515	7	FSM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_6	19.1398362932741	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165957806	165994079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
ENSMUST00000060834.12	chr7	+	982	7	FSM	ENSMUSG00000042831.14	ENSMUST00000060834.12	982	7	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_5	88.8144132446981	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	30008141	30013729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012015_30012133_30013343
ENSMUST00000060835.12	chr11	+	4763	31	FSM	ENSMUSG00000010342.17	ENSMUST00000060835.12	4763	31	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_12	24.6584671056414	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGCCAGTTGTGATT	NA	False	NA	14	True	AATAAA	-20	NA	87295890	87446649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ENSMUST00000060895.6	chr11	-	2044	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_7	61.1714853284106	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTGTCTAGTGCTCA	NA	False	NA	-7	True	AATAAA	-21	NA	21321201	21271672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
ENSMUST00000060899.9	chr5	-	3724	5	FSM	ENSMUSG00000044968.17	ENSMUST00000060899.9	3724	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	45.4883226773641	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTGAAAAGATACCTGAA	NA	False	NA	NA	False	AATAAA	-17	NA	21906394	21867900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906202
ENSMUST00000060947.14	chr5	-	3597	4	FSM	ENSMUSG00000046798.15	ENSMUST00000060947.14	3597	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	5.18544972870135	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCTCTGTCCTTTTCT	NA	False	NA	-3	True	ATTAAA	-17	NA	5564873	5555108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564764
ENSMUST00000060955.12	chr2	-	3686	20	FSM	ENSMUSG00000027346.16	ENSMUST00000060955.12	3686	20	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_16	14.3132737727671	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCTTCCTGATTTGTT	NA	False	NA	0	True	NA	NA	NA	132420153	132371001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414175_132419987
ENSMUST00000060956.13	chr11	+	628	4	FSM	ENSMUSG00000049299.15	ENSMUST00000060956.13	628	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	212.171314429323	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	False	NA	16	True	AATAAA	-25	NA	69214900	69216619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69215083_69215220_69215292_69215649_69215789_69216383
ENSMUST00000060987.15	chr10	+	1071	6	FSM	ENSMUSG00000035242.16	ENSMUST00000060987.15	1071	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	2881.68367452085	26880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	False	NA	19	True	AATAAA	-19	NA	80662489	80665124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80662740_80664070_80664126_80664129_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUST00000060991.6	chr10	+	1556	6	NIC	ENSMUSG00000006728.13	novel	2038	7	NA	NA	1204	2344	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAAATCCAAGCCACCC	NA	False	NA	NA	False	NA	NA	NA	126903148	126906133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_chr10_+_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905983
ENSMUST00000061052.12	chr17	-	1452	13	FSM	ENSMUSG00000024426.18	ENSMUST00000061052.12	1452	13	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	27.2308801424657	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTTGTCATTATTCAAA	NA	False	NA	2	True	AATAAA	-38	NA	36220967	36208486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ENSMUST00000061086.9	chr19	+	927	2	FSM	ENSMUSG00000045826.10	ENSMUST00000061086.9	927	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCACTCTTGTGTCCCG	388	False	NA	NA	False	NA	NA	NA	4204604	4206750	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4204703_4205921
ENSMUST00000061135.8	chr4	+	1589	3	FSM	ENSMUSG00000039693.12	ENSMUST00000061135.8	1589	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	140.5	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	18	False	NA	14	True	NA	NA	NA	48539934	48561918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_48539998_48552379_48552831_48560843
ENSMUST00000061158.5	chr2	+	935	8	FSM	ENSMUSG00000051154.12	ENSMUST00000061158.5	935	8	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_2	22.7909756576714	1601	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTTGGAGTTTGTGTG	60	False	NA	37	True	AATAAA	-31	NA	18677233	18681042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_18677415_18678705_18678818_18678935_18679000_18679091_18679127_18679466_18679528_18679619_18679677_18679760_18679821_18680677
ENSMUST00000061179.12	chr2	+	4967	26	FSM	ENSMUSG00000035437.16	ENSMUST00000061179.12	4967	26	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	34.3579743291132	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGCTTCATACAAAAGTA	1545	False	NA	7	True	ATTAAA	-18	NA	37333296	37456449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ENSMUST00000061209.7	chr9	+	3092	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	0	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGAGAGATGGCTCAG	187	False	NA	NA	False	AATAAA	-13	NA	108337725	108343137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108337817_108340136
ENSMUST00000061239.14	chr15	+	1917	18	FSM	ENSMUSG00000022436.17	ENSMUST00000061239.14	1917	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_17	114.986414121521	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAACTGGCCAAACGAAAA	4398	False	NA	87	True	AATAAA	-20	NA	78783967	78796251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794294_78796129
ENSMUST00000061242.8	chr11	-	1800	5	FSM	ENSMUSG00000048076.15	ENSMUST00000061242.8	1800	5	0	0	0	0	multi-exon	FALSE	canonical	3	1704	junction_4	263.796678333902	9107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGCTTGTGTGTCAGT	1847	False	NA	-4	True	AATAAA	-15	NA	59119096	59102239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
ENSMUST00000061251.6	chr5	-	579	2	FSM	ENSMUSG00000072694.9	ENSMUST00000061251.6	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTTGGCGTCCTTCT	750	False	NA	-3	True	NA	NA	NA	114952006	114950853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_114951267_114951840
ENSMUST00000061283.15	chr11	-	2396	8	FSM	ENSMUSG00000017561.17	ENSMUST00000061283.15	2396	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	192.168081190846	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTTGTGGTTTTTTGT	4488	False	NA	-3	True	AATAAA	-20	NA	79971817	79937318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
ENSMUST00000061295.7	chr15	+	1564	3	FSM	ENSMUSG00000038009.8	ENSMUST00000061295.7	1564	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	3.5	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACGGAATCCTAGCCCA	4023	False	NA	3	True	AATAAA	-21	NA	98997292	99002618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_98997482_98998703_98999657_99002196
ENSMUST00000061299.9	chr5	-	1161	2	FSM	ENSMUSG00000048373.9	ENSMUST00000061299.9	1161	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTGTTTCCTTCTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	44139106	44136201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_44137311_44139054
ENSMUST00000061324.6	chr10	+	1998	5	FSM	ENSMUSG00000019977.17	ENSMUST00000061324.6	1998	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	490.144366488079	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTGCATGTTATTTA	NA	False	NA	NA	False	AATAAA	-21	NA	21171916	21187105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21185641
ENSMUST00000061437.5	chr2	+	1535	10	FSM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	0	0	0	0	multi-exon	FALSE	canonical	3	1931	junction_6	170.679108342794	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGTCTGGGCCTGTGTT	NA	False	NA	2	True	AATAAA	-22	NA	179813277	179818079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ENSMUST00000061481.7	chr11	-	1243	5	FSM	ENSMUSG00000049291.7	ENSMUST00000061481.7	1243	5	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	3.57071421427143	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATGCCTCAGAGCTC	NA	False	NA	NA	False	ATTAAA	-9	NA	59266483	59263494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_59263997_59264251_59264395_59264991_59265264_59265982_59266146_59266320
ENSMUST00000061522.8	chr18	-	1451	4	FSM	ENSMUSG00000044595.11	ENSMUST00000061522.8	1451	4	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_2	7.76029781788188	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTGTCTGCTTGGTAT	NA	False	NA	-8	True	ATTAAA	-14	NA	36899251	36896725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_36897541_36898148_36898611_36898945_36899064_36899195
ENSMUST00000061618.9	chr19	+	4216	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	27.8366043764299	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATAGATGTCCATCTCT	NA	False	NA	21	True	AATAAA	-11	NA	11889762	11922455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ENSMUST00000061703.10	chr17	+	644	5	FSM	ENSMUSG00000045257.11	ENSMUST00000061703.10	644	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	10.1242283656583	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTTTTGAATTATGTA	NA	False	NA	12	True	AATAAA	-15	NA	80597640	80604902	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_80597767_80599753_80599808_80601898_80602006_80602941_80603079_80604682
ENSMUST00000061755.9	chrX	-	3604	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_3	45.9604109533411	1784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATTTGCTCACATTTTT	NA	False	NA	-22	True	AATAAA	-19	NA	37545331	37508383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ENSMUST00000061757.4	chr11	+	3852	2	FSM	ENSMUSG00000046311.14	ENSMUST00000061757.4	3852	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAGTAGAGAGTCATT	6586	False	NA	31	True	AATAAA	-40	NA	49105375	49109636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_49105482_49105890
ENSMUST00000061786.6	chr11	+	1597	6	FSM	ENSMUSG00000050270.13	ENSMUST00000061786.6	1597	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	4.45421149026402	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAATTACTGGGGAGAAT	3918	False	NA	NA	False	NA	NA	NA	66915979	66926138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_66916098_66916734_66916765_66920791_66920853_66921887_66922012_66923006_66923067_66924934
ENSMUST00000061826.3	chr3	-	2028	3	FSM	ENSMUSG00000043300.3	ENSMUST00000061826.3	2028	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTTTCTCGATGTCA	NA	False	NA	1	True	ATTAAA	-41	NA	69506293	69481490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_69483294_69486658_69486725_69506134
ENSMUST00000061833.6	chr9	-	3503	3	FSM	ENSMUSG00000048503.8	ENSMUST00000061833.6	3503	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	3	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCCTTCGTATCTTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	43027865	43019944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_43023154_43024755_43024956_43027771
ENSMUST00000061859.7	chr17	+	2142	3	FSM	ENSMUSG00000043311.8	ENSMUST00000061859.7	2142	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTCCACTCAGTGTCCT	2180	False	NA	23	True	AATAAA	-40	NA	35345361	35347831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35345427_35345618_35345762_35345897
ENSMUST00000061891.11	chr2	+	1076	3	FSM	ENSMUSG00000044991.11	ENSMUST00000061891.11	1076	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	20.5	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACTCAGTCTATTTC	NA	False	NA	27	True	NA	NA	NA	132528850	132592975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_132528902_132533869_132534052_132592132
ENSMUST00000061895.16	chr5	-	2183	8	FSM	ENSMUSG00000023452.20	ENSMUST00000061895.16	2183	8	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_2	53.5235976948867	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTAGCTTTGTATTTTGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	32942990	32893644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
ENSMUST00000061937.13	chr3	+	2892	7	FSM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	4.91313432432789	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGACTTATTTTGATC	5954	False	NA	NA	False	AATAAA	-15	NA	146156224	146171604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
ENSMUST00000061938.14	chr11	-	819	2	FSM	ENSMUSG00000057534.14	ENSMUST00000061938.14	819	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	2024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCGCGTCATACT	6819	False	NA	0	True	AATAAA	-26	NA	88857743	88855483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_88856100_88857540
ENSMUST00000061970.12	chrX	+	3379	15	FSM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_14	28.3207755284104	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGGGCTATGACTGT	NA	False	NA	16	True	AATAAA	-24	NA	70258611	70358901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ENSMUST00000061973.5	chr9	-	1084	2	FSM	ENSMUSG00000049734.10	ENSMUST00000061973.5	1084	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGCCGCCTCTGCTTC	NA	False	NA	1	True	AATAAA	-18	NA	108888802	108887000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_108887997_108888714
ENSMUST00000061995.10	chr10	-	1583	2	FSM	ENSMUSG00000051346.10	ENSMUST00000061995.10	1583	2	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	0	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCTGTCTATAAAATTGC	NA	False	NA	0	True	AATAAA	-41	NA	128047676	128045776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128047261_128047577
ENSMUST00000062047.6	chr2	-	1754	2	FSM	ENSMUSG00000027459.17	ENSMUST00000062047.6	1754	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGACTCTTCTCTGC	NA	False	NA	-1	True	AATAAA	-22	NA	151822139	151811317	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_151812845_151821912
ENSMUST00000062148.9	chr2	+	912	1	FSM	ENSMUSG00000042814.9	ENSMUST00000062148.9	912	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1710	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATCGGGGTGTTGTAAC	NA	False	NA	101	True	AATAAA	-23	NA	152528954	152529866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_152529000_152529900
ENSMUST00000062211.4	chr2	+	2628	22	FSM	ENSMUSG00000046338.5	ENSMUST00000062211.4	2628	22	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	53.4925768898164	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	5001	False	NA	14	True	AATAAA	-25	NA	127267118	127278012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ENSMUST00000062213.13	chr19	+	2867	11	FSM	ENSMUSG00000025212.18	ENSMUST00000062213.13	2867	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	13.7767920794356	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTTCAGTTATTCC	NA	False	NA	7	True	AATAAA	-18	NA	45036112	45044821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_45036330_45037542_45037707_45038182_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
ENSMUST00000062322.11	chr19	+	5205	14	FSM	ENSMUSG00000055491.15	ENSMUST00000062322.11	5205	14	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_2	120.971168749579	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCAGCGTGTCCTTTC	NA	False	NA	3	True	AATAAA	-15	NA	46045022	46061348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_46045183_46049841_46050016_46050579_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ENSMUST00000062350.15	chr5	+	2252	5	FSM	ENSMUSG00000037017.16	ENSMUST00000062350.15	2252	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	46.7566840141599	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGCGTCTCAGGACTGT	NA	False	NA	3	True	AATAAA	-12	NA	138115164	138132475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138115251_138116097_138116183_138123239_138123953_138124715_138124909_138131300
ENSMUST00000062368.13	chr9	-	3806	19	FSM	ENSMUSG00000032480.18	ENSMUST00000062368.13	3806	19	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_18	79.7176537599273	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109930155	109913387	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ENSMUST00000062369.14	chr17	+	3625	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	68.5	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTTTGTATTTGTGTT	NA	False	NA	NA	False	AAAACA	-43	NA	69690313	69697745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_69690416_69692415_69692500_69694306
ENSMUST00000062370.9	chr12	-	2979	2	FSM	ENSMUSG00000045690.9	ENSMUST00000062370.9	2979	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	77476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGGTATCTTGTCTT	6410	False	NA	-2	True	AATAAA	-17	NA	75716311	75677369	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_75680283_75716245
ENSMUST00000062405.8	chr11	-	1611	2	FSM	ENSMUSG00000049892.8	ENSMUST00000062405.8	1611	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTTTGCTTTTAGGTT	NA	False	NA	NA	False	AATAAA	-20	NA	59855770	59854006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_59855193_59855345
ENSMUST00000062530.5	chr11	+	1910	3	FSM	ENSMUSG00000043372.13	ENSMUST00000062530.5	1910	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	11.5	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGAACTTGTGGCCTG	NA	False	NA	-10	True	NA	NA	NA	103024170	103030702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_103024284_103024860_103024968_103029012
ENSMUST00000062542.5	chrX	+	1572	2	FSM	ENSMUSG00000046180.12	ENSMUST00000062542.5	1572	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCAGCAGTGTTTGTTC	NA	False	NA	13	True	AATAAA	-18	NA	57956820	57965664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_57956922_57964193
ENSMUST00000062601.14	chr3	-	624	5	FSM	ENSMUSG00000062006.13	ENSMUST00000062601.14	624	5	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_4	3512.03875085398	142267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTTATCTGTGATTTG	NA	False	NA	-11	True	AATAAA	-20	NA	130523986	130520479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523769
ENSMUST00000062613.12	chr8	-	2463	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_2	12.5	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4780	False	NA	-4	True	ATTAAA	-18	NA	14024777	14002007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_14004136_14005719_14005818_14024540
ENSMUST00000062626.4	chr6	+	3007	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATGACTTTTTCTGAA	NA	False	NA	9	True	NA	NA	NA	59185854	59189018	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_59186167_59186323
ENSMUST00000062629.5	chr14	-	997	9	FSM	ENSMUSG00000047911.7	ENSMUST00000062629.5	997	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	2.75850956133924	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTCCCTCTGCCTCCCCC	NA	False	NA	NA	False	AATAAA	-15	NA	70890524	70884741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_70884990_70885076_70885111_70885484_70885526_70885699_70885852_70886910_70887005_70889562_70889677_70889768_70889855_70889971_70890136_70890460
ENSMUST00000062658.15	chr13	-	3796	14	FSM	ENSMUSG00000021156.18	ENSMUST00000062658.15	3796	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_13	37.5302639220559	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTCTTGTCAGTAAGC	NA	False	NA	-3	True	AATAAA	-17	NA	9815196	9734873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9815090
ENSMUST00000062672.7	chr2	-	1042	2	FSM	ENSMUSG00000049950.7	ENSMUST00000062672.7	1042	2	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	0	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGGATCCTGCATGGA	2317	False	NA	-15	True	AATAAA	-18	NA	3333680	3329985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_3330911_3333563
ENSMUST00000062674.7	chr10	+	572	3	FSM	ENSMUSG00000063457.15	ENSMUST00000062674.7	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	7729	junction_2	373	58004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAAAGACTGGTTTTGGT	6534	False	NA	3	True	NA	NA	NA	80128478	80129921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80128695_80129475_80129711_80129800
ENSMUST00000062678.11	chr10	-	1984	13	FSM	ENSMUSG00000061032.10	ENSMUST00000062678.11	1984	13	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_1	71.0948115000119	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGCTTCTCCCATTT	NA	False	NA	-19	True	AATAAA	-19	NA	78248877	78236219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_78236819_78237683_78237801_78238258_78238279_78238443_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
ENSMUST00000062740.15	chr12	-	3066	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	5455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTTCTGTTGGTTTCC	NA	False	NA	NA	False	AATAAA	-32	NA	30961570	30943324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
ENSMUST00000062755.10	chr6	+	1764	4	FSM	ENSMUSG00000042992.16	ENSMUST00000062755.10	1764	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	6.37704215656966	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGATCTGATTCTAAT	NA	False	NA	31	True	ATTAAA	-32	NA	134617902	134688150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_134618221_134621291_134621436_134662926_134663085_134687006
ENSMUST00000062802.5	chr4	+	465	3	FSM	ENSMUSG00000045854.5	ENSMUST00000062802.5	465	3	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_2	3	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTGGAATCCTCAATTG	-15	True	NA	22	True	ATTAAA	-22	NA	32800252	32801383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_32800336_32800609_32800751_32801142
ENSMUST00000062824.12	chr4	+	991	3	FSM	ENSMUSG00000048772.16	ENSMUST00000062824.12	991	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3.5	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTATCTATCCTGGGG	NA	False	NA	NA	False	AATAAA	-18	NA	117109147	117125777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_117109332_117123056_117123173_117125086
ENSMUST00000062855.15	chr10	-	2562	14	FSM	ENSMUSG00000042570.15	ENSMUST00000062855.15	2562	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	62.0923153160017	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390925	79376078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384738_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ENSMUST00000062861.15	chr14	-	2338	16	FSM	ENSMUSG00000040472.16	ENSMUST00000062861.15	2338	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	137.773727539034	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAGAAAAGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	55959633	55953333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959509
ENSMUST00000062904.11	chr4	+	3151	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	1575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGGCTATGTGGCTT	9070	False	NA	NA	False	NA	NA	NA	152018147	152066594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUST00000062962.12	chr5	+	3088	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	8.49470423263812	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACATTTTTTTAAATGAA	6678	False	NA	54	True	AATAAA	-14	NA	30805276	30817073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
ENSMUST00000063042.11	chr9	+	2396	16	FSM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_2	39.3725228497687	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGGTCCTGTCATTAA	NA	False	NA	24	True	AATAAA	-15	NA	114230143	114303445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
ENSMUST00000063117.10	chr12	+	1656	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_5	40.5555175037873	1770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTGTCATGGACAA	NA	False	NA	13	True	NA	NA	NA	87194491	87211497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUST00000063199.13	chr1	-	2947	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCTTGTATGACTTCA	NA	False	NA	-31	True	AATAAA	-38	NA	156767101	156635685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ENSMUST00000063204.9	chr10	-	745	5	FSM	ENSMUSG00000051736.9	ENSMUST00000063204.9	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	5.93190525885234	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGACTCTTCCATTTTA	NA	False	NA	-2	True	AATAAA	-29	NA	39009902	38994799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_38995031_38996253_38996393_38998172_38998332_39008242_39008375_39009818
ENSMUST00000063249.9	chr7	+	2155	17	FSM	ENSMUSG00000051768.10	ENSMUST00000063249.9	2155	17	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_4	31.1527862919194	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGTTTCTCTCTTAGGAG	NA	False	NA	7	True	AATAAA	-19	NA	24246574	24272863	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ENSMUST00000063251.3	chr2	-	488	3	FSM	ENSMUSG00000051769.3	ENSMUST00000063251.3	488	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	2.5	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTATGTAATAACTGTTT	NA	False	NA	NA	False	ATTAAA	-38	NA	164042050	164040782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_164040933_164041577_164041737_164041871
ENSMUST00000063262.11	chr5	-	2254	6	FSM	ENSMUSG00000058291.15	ENSMUST00000063262.11	2254	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	25.9584283037321	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTTGATCTTTGTTTG	1752	False	NA	-9	True	AATAAA	-10	NA	138618002	138604381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614822_138615316_138615430_138617870
ENSMUST00000063324.14	chr7	-	553	4	FSM	ENSMUSG00000051811.15	ENSMUST00000063324.14	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_1	73.0677007226099	5260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756093	4754790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_4754975_4755059_4755161_4755722_4755849_4755951
ENSMUST00000063340.12	chrX	+	795	4	FSM	ENSMUSG00000051827.12	ENSMUST00000063340.12	795	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	56.8174464598878	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATACATTTGTTTTGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	36508628	36513339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36508740_36508901_36509314_36510828_36510875_36513113
ENSMUST00000063344.15	chr17	+	1861	11	FSM	ENSMUSG00000002279.20	ENSMUST00000063344.15	1861	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.2406467618335	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCCTCCTGTCTCTAT	NA	False	NA	107	True	NA	NA	NA	25798147	25881800	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25798354_25804516_25804827_25822736_25822748_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ENSMUST00000063414.9	chr15	+	3229	13	FSM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_12	8.71779788708135	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTTTTTATTGCATT	NA	False	NA	8	True	AATAAA	-17	NA	86098659	86382704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ENSMUST00000063417.11	chr17	-	2288	8	FSM	ENSMUSG00000024097.12	ENSMUST00000063417.11	2288	8	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_3	505.274425335341	5807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514734	80507508	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUST00000063507.11	chrX	-	4227	28	FSM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_27	54.2283947104	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224449	59101315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ENSMUST00000063520.15	chr16	+	3557	5	FSM	ENSMUSG00000022698.18	ENSMUST00000063520.15	3557	5	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	525.255652040033	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGATCTGTCTGTAACT	NA	False	NA	17	True	AATAAA	-17	NA	43960248	43982835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_43960475_43976775_43976910_43977436_43977557_43978242_43978310_43979825
ENSMUST00000063542.8	chr16	+	2136	4	FSM	ENSMUSG00000022698.18	ENSMUST00000063542.8	2136	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	621.795965106097	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGGTATGAAAGTATCAT	NA	False	NA	NA	False	AGTAAA	-2	NA	43960254	43981537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_43960475_43976772_43976910_43978242_43978310_43979825
ENSMUST00000063574.7	chr17	+	1192	6	FSM	ENSMUSG00000015126.10	ENSMUST00000063574.7	1192	6	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	34.9685573050991	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4603	False	NA	28	True	AATAAA	-18	NA	25459143	25461772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25459339_25459417_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
ENSMUST00000063587.13	chr7	-	1553	10	FSM	ENSMUSG00000044702.14	ENSMUST00000063587.13	1553	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	51.0709987525234	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTTGTTCTATTTT	NA	False	NA	0	True	AATAAA	-20	NA	121732132	121706484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121728896_121728957_121731942
ENSMUST00000063641.11	chr16	+	517	4	FSM	ENSMUSG00000051989.12	ENSMUST00000063641.11	517	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	48.3482735529983	1322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTCTGCATTCTCTCT	NA	False	NA	26	True	AATAAA	-16	NA	92098173	92109929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_92098232_92102175_92102286_92107688_92107858_92109749
ENSMUST00000063661.13	chr16	-	3896	15	FSM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_14	86.121532541792	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGCAGTTCTCTATTTA	NA	False	NA	-11	True	AATATA	-17	NA	43959559	43906007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959310
ENSMUST00000063669.8	chr7	-	2644	12	FSM	ENSMUSG00000030986.14	ENSMUST00000063669.8	2644	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	113.27630229292	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTACTATTCCATGCT	NA	False	NA	-7	True	AATAAA	-22	NA	133384455	133322838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133384396
ENSMUST00000063683.8	chr17	-	2312	4	FSM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	227.371941980535	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACACACTGTTCCATTCA	NA	False	NA	-19	True	AATAAA	-19	NA	7228555	7222409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_7224424_7225052_7225168_7228135_7228190_7228426
ENSMUST00000063814.15	chr18	-	2289	7	FSM	ENSMUSG00000052102.16	ENSMUST00000063814.15	2289	7	0	0	0	0	multi-exon	FALSE	canonical	3	1055	junction_1	137.188434886716	2571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTGTCTTTTGT	NA	False	NA	-30	True	ATTAAA	-13	NA	38472056	38460610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471960
ENSMUST00000063817.7	chr17	+	753	5	FSM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	562.646592009585	3143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTGTGGGTCTGCAG	NA	False	NA	NA	False	AATAAA	-22	NA	79223945	79227735	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_79224123_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ENSMUST00000063879.13	chr10	-	1654	6	FSM	ENSMUSG00000052151.13	ENSMUST00000063879.13	1654	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	6.89927532426414	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCATGTTGATTTTTCAA	NA	False	NA	0	True	TATAAA	-22	NA	79369630	79362263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79369457
ENSMUST00000063882.12	chr5	+	4116	11	FSM	ENSMUSG00000051674.16	ENSMUST00000063882.12	4116	11	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	17.7721692542019	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGTGGGGTCTTTGT	NA	False	NA	15	True	AATAAA	-26	NA	73648375	73718133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ENSMUST00000063888.5	chr12	+	1982	11	FSM	ENSMUSG00000052160.8	ENSMUST00000063888.5	1982	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	2.92574776766556	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTGTGTTCTCTCT	4280	False	NA	NA	False	AATAAA	-45	NA	112727088	112735424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_112727218_112728959_112729044_112729830_112729998_112730396_112730581_112730881_112731003_112731431_112731560_112733136_112733338_112733931_112734072_112734187_112734354_112734458_112734556_112734859
ENSMUST00000063902.14	chr7	-	1241	10	FSM	ENSMUSG00000030929.18	ENSMUST00000063902.14	1241	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	31.084115271666	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAATAATTCATT	NA	False	NA	NA	False	NA	NA	NA	119393190	119371160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_119371568_119371767_119371843_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
ENSMUST00000063976.9	chr7	+	3366	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCTTCAATTTTAT	3233	False	NA	9	True	AATAAA	-14	NA	18962258	18981793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_18962510_18978678
ENSMUST00000064067.9	chr15	-	3281	2	FSM	ENSMUSG00000036061.11	ENSMUST00000064067.9	3281	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTCCCCCCTGAGTT	NA	False	NA	-18	True	NA	NA	NA	103066429	103061733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_103064629_103066043
ENSMUST00000064104.13	chr11	-	3069	6	FSM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_4	66.5263857428013	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTGGATTTTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	54678501	54608281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647231_54647386_54678385
ENSMUST00000064139.8	chr4	+	3159	6	FSM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	17.8616908494129	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACTGGTGCCTGAGCTGT	NA	False	NA	13	True	AATAAA	-23	NA	105014543	105089961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
ENSMUST00000064141.12	chr2	+	1905	15	FSM	ENSMUSG00000041966.19	ENSMUST00000064141.12	1905	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_14	54.6553207074357	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCTTTATGACTATCC	NA	False	NA	12	True	AATAAA	-21	NA	70886124	70929486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70929358
ENSMUST00000064151.13	chr7	+	1799	8	FSM	ENSMUSG00000025509.16	ENSMUST00000064151.13	1799	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	24.6601388678083	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTCACTTCTGCATGT	9954	False	NA	19	True	AATAAA	-20	NA	141035119	141040007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_141035387_141037185_141037419_141037504_141037571_141037917_141038128_141038342_141038404_141038757_141038891_141039079_141039203_141039301
ENSMUST00000064162.11	chr14	+	1576	5	FSM	ENSMUSG00000052334.12	ENSMUST00000064162.11	1576	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	25.043711785596	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	41765951	41825778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
ENSMUST00000064200.9	chr15	+	1623	8	FSM	ENSMUSG00000052369.9	ENSMUST00000064200.9	1623	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	38.9117263685331	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCACTGTCTCTGACTGC	7681	False	NA	11	True	AATAAA	-17	NA	97862110	97868156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_97862385_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
ENSMUST00000064230.16	chr14	+	2387	13	FSM	ENSMUSG00000052395.18	ENSMUST00000064230.16	2387	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_11	8.01171017948103	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTTCCCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	30376316	30413274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398858_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ENSMUST00000064231.8	chr7	-	1780	6	FSM	ENSMUSG00000052396.8	ENSMUST00000064231.8	1780	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	4.4	327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTTTTCTCTCTCC	NA	False	NA	-1	True	AATAAA	-20	NA	98887826	98868290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_98869167_98871459_98871660_98872199_98872375_98872707_98872913_98881664_98881844_98887681
ENSMUST00000064234.7	chr17	-	3164	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	1928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGAGCGTTTATTGAGA	NA	False	NA	1	True	AATAAA	-20	NA	7050183	7005439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ENSMUST00000064240.14	chr12	-	3937	6	FSM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	65.6310901935965	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTGGCTCGTGTATT	NA	False	NA	NA	False	AGTAAA	-31	NA	31549554	31534827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589_31544749_31549521
ENSMUST00000064244.11	chr2	-	2281	8	FSM	ENSMUSG00000052406.15	ENSMUST00000064244.11	2281	8	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	23.9344342497821	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGTGTGGAAGTTCAT	NA	False	NA	-6	True	AATAAA	-14	NA	26854398	26843574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
ENSMUST00000064272.10	chr1	+	1998	8	FSM	ENSMUSG00000052423.16	ENSMUST00000064272.10	1998	8	0	0	0	0	multi-exon	FALSE	non_canonical	1	74	junction_2	53.1005976368228	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTGTGATTTCTGCA	NA	False	NA	15	True	AATAAA	-15	NA	171097897	171104468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171097985_171098772_171098944_171099276_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
ENSMUST00000064314.10	chr8	-	1256	7	FSM	ENSMUSG00000052456.10	ENSMUST00000064314.10	1256	7	0	0	0	0	multi-exon	FALSE	canonical	1	664	junction_3	477.58303524681	3804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8400	False	NA	-4	True	AATAAA	-14	NA	85751910	85744559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750955_85751733
ENSMUST00000064393.6	chr19	+	1803	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	0	0	0	0	multi-exon	TRUE	canonical	3	369	junction_1	16.9958634673264	1506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGCACTGTAGTGTAAA	NA	False	NA	27	True	CATAAA	-19	NA	29078774	29121243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
ENSMUST00000064407.10	chrX	+	4530	10	FSM	ENSMUSG00000004221.17	ENSMUST00000064407.10	4530	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	31.82591536608	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATGCACTCTGTCCTCC	NA	False	NA	1	True	AATAAA	-15	NA	73473309	73495126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480772_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ENSMUST00000064447.12	chr2	+	5710	44	FSM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	0	0	0	0	multi-exon	TRUE	canonical	3	896	junction_14	107.189702087653	1289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCATGTGGCAACTTTC	4848	False	NA	18	True	ATTAAA	-19	NA	30176408	30234278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ENSMUST00000064495.8	chr8	+	2580	22	FSM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_11	39.7071479254288	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTTTTTGCCTATCTG	NA	False	NA	18	True	AATAAA	-14	NA	85717245	85729978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ENSMUST00000064536.13	chr12	-	4443	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAATGATACGAGCCA	NA	False	NA	NA	False	AATAAA	-36	NA	21423633	21373517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ENSMUST00000064635.12	chr16	-	2170	8	FSM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	73.3462573645565	1701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGCGCATGTGCACAG	NA	False	NA	-2	True	NA	NA	NA	5073847	5062015	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ENSMUST00000064639.15	chr3	-	4073	28	FSM	ENSMUSG00000042520.17	ENSMUST00000064639.15	4073	28	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	252.379539778417	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCAGCCTCTGCCCATT	3547	False	NA	NA	False	AAAAAG	-23	NA	89959782	89907594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ENSMUST00000064701.8	chr13	+	2130	6	FSM	ENSMUSG00000021504.15	ENSMUST00000064701.8	2130	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	8.85437744847146	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTGGCAAGGAACTGG	NA	False	NA	5	True	AATAAA	-18	NA	55747877	55758255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
ENSMUST00000064703.13	chr2	+	1036	4	FSM	ENSMUSG00000035268.15	ENSMUST00000064703.13	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_1	29.6348143611905	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTATGATCTTTTCTTT	8603	False	NA	10	True	AATAAA	-20	NA	163500318	163568074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_163500413_163545405_163545476_163563047_163563222_163567376
ENSMUST00000064740.9	chr6	+	1519	9	FSM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_2	134.074081667562	6436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGAAGACTTTTTATTG	2315	False	NA	19	True	AATAAA	-23	NA	73225364	73253894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_73225737_73233153_73233258_73237457_73237575_73240790_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
ENSMUST00000064759.7	chr3	-	3215	21	FSM	ENSMUSG00000014601.14	ENSMUST00000064759.7	3215	21	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	23.6893963620857	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539010	107519847	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ENSMUST00000064771.12	chr1	-	3688	20	FSM	ENSMUSG00000052748.15	ENSMUST00000064771.12	3688	20	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	20.5845328266092	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTTTCCGTTTACT	NA	False	NA	0	True	AATAAA	-18	NA	151304206	151243449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ENSMUST00000064798.16	chr17	+	493	3	FSM	ENSMUSG00000024038.18	ENSMUST00000064798.16	493	3	0	0	0	0	multi-exon	FALSE	canonical	3	3604	junction_2	48.5	13163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTGGTTATTTCCCCTC	NA	False	NA	31	True	AATAAA	-21	NA	31739088	31750305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_31739236_31740542_31740667_31750083
ENSMUST00000064807.9	chr4	+	1378	3	FSM	ENSMUSG00000039693.12	ENSMUST00000064807.9	1378	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	89	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGACTTTATCTTTT	2	True	NA	65	True	GATAAA	-14	NA	48540078	48561577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_48540272_48552379_48552831_48560843
ENSMUST00000064848.7	chr10	-	3114	28	FSM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_19	68.4831139760951	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGAGTTTTCTCTTATG	NA	False	NA	-4	True	AATAAA	-29	NA	117628610	117586525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ENSMUST00000064889.13	chr17	-	1988	13	FSM	ENSMUSG00000023942.16	ENSMUST00000064889.13	1988	13	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_12	659.372555287727	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906496	45896128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
ENSMUST00000064900.16	chr3	+	2931	14	FSM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	24.6852374253431	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAGTGTTTATTACTG	3287	False	NA	113	True	AAAAAG	-4	NA	96604398	96613386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ENSMUST00000064924.6	chr15	+	6658	31	FSM	ENSMUSG00000058290.5	ENSMUST00000064924.6	6658	31	0	0	0	0	multi-exon	TRUE	canonical	3	138	junction_1	58.1614706370692	389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	359	False	NA	17	True	AATAAA	-17	NA	102204700	102232792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ENSMUST00000064941.7	chr11	-	2721	8	FSM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	7.40104791256493	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTTCTGTGATGTGTG	NA	False	NA	0	True	NA	NA	NA	98666159	98658757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_98659246_98659874_98660086_98660528_98660715_98661013_98661658_98662025_98662171_98662262_98662352_98662618_98662961_98665543
ENSMUST00000064950.11	chr1	+	1618	5	FSM	ENSMUSG00000013973.13	ENSMUST00000064950.11	1618	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	61.0184398358398	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGAGAAGCTGTGGC	1455	False	NA	18	True	NA	NA	NA	171156975	171169250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171157095_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUST00000065049.15	chr8	-	1006	8	FSM	ENSMUSG00000052926.17	ENSMUST00000065049.15	1006	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	398.770508397182	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	8253	False	NA	-8	True	AATAAA	-14	NA	85692670	85684295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_85684483_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ENSMUST00000065074.14	chr3	+	3224	10	FSM	ENSMUSG00000034544.18	ENSMUST00000065074.14	3224	10	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_4	31.3821526695165	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTGACTGCTTCCTCC	NA	False	NA	15	True	AATAAA	-15	NA	66893004	67265728	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ENSMUST00000065135.12	chr8	+	1497	4	FSM	ENSMUSG00000031851.15	ENSMUST00000065135.12	1497	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	41.4273125150814	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCATGTCTAATTAGTTTA	NA	False	NA	NA	False	ACTAAA	-15	NA	126460976	126465918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126464793
ENSMUST00000065210.10	chr10	+	1156	3	FSM	ENSMUSG00000064030.16	ENSMUST00000065210.10	1156	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	117	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGTGGTCAGGCTTTG	NA	False	NA	NA	False	AATAAA	-11	NA	128584323	128602428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128584436_128601015_128601110_128601478
ENSMUST00000065358.9	chr9	-	858	8	FSM	ENSMUSG00000032299.11	ENSMUST00000065358.9	858	8	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_7	157.218553197095	3091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGGGTCTTGCTTGC	6277	False	NA	-4	True	AATAAA	-15	NA	57065615	57062322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
ENSMUST00000065373.6	chr1	+	1710	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_1	10.5	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTGTTTTGTTTGCCTC	NA	False	NA	22	True	ATTAAA	-12	NA	16735433	16748499	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_16735730_16737891_16737998_16747191
ENSMUST00000065418.7	chr3	+	1107	8	FSM	ENSMUSG00000027935.15	ENSMUST00000065418.7	1107	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	3.88613443106727	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCCATTTGCATTACT	NA	False	NA	6	True	ATTAAA	-18	NA	90128093	90133276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_90128330_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
ENSMUST00000065482.6	chr3	-	1923	2	FSM	ENSMUSG00000053192.10	ENSMUST00000065482.6	1923	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGGGCTTAGTTTTTTC	6380	False	NA	0	True	AATAAA	-16	NA	95135988	95126445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95127775_95135394
ENSMUST00000065504.17	chr14	-	2851	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	2177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTGTATGTTTTTTTT	7978	False	NA	16	True	AATAAA	-41	NA	20530201	20505327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ENSMUST00000065515.14	chr16	-	1945	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_2	54.3950027716757	1183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	False	NA	0	True	AATAAA	-16	NA	56537813	56510694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ENSMUST00000065527.11	chr10	+	1274	7	FSM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	14.8286509463568	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTATGTGCTCCAGAAG	NA	False	NA	2	True	AATAAA	-12	NA	22049419	22059813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_22049436_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ENSMUST00000065534.10	chr8	+	3127	12	FSM	ENSMUSG00000001482.16	ENSMUST00000065534.10	3127	12	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	53.2429330273546	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169724	124190009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124169791_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ENSMUST00000065573.14	chr1	+	4547	10	FSM	ENSMUSG00000039210.17	ENSMUST00000065573.14	4547	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_8	10.9341463112378	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	186947707	187083624	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
ENSMUST00000065600.8	chr10	+	3123	3	FSM	ENSMUSG00000053684.9	ENSMUST00000065600.8	3123	3	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	1	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTATATATGGTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	121575841	121588770	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_121576116_121581235_121581522_121586207
ENSMUST00000065625.12	chr1	+	2749	15	FSM	ENSMUSG00000053286.12	ENSMUST00000065625.12	2749	15	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_10	24.5323609686038	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGACTGGGCTCGCGT	NA	False	NA	15	True	AATAAA	-16	NA	151304292	151333912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ENSMUST00000065629.6	chr13	-	2910	31	FSM	ENSMUSG00000021585.11	ENSMUST00000065629.6	2910	31	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_30	32.8517883835873	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCAAGGTAAACCTTGG	NA	False	NA	NA	False	AATAAA	-12	NA	74956058	74842406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74955937
ENSMUST00000065648.15	chr1	+	2529	2	FSM	ENSMUSG00000050565.17	ENSMUST00000065648.15	2529	2	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	0	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTGGCTTTTGTCTCTT	NA	False	NA	10	True	AATAAA	-19	NA	155916662	155929482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_155916749_155927039
ENSMUST00000065678.6	chr4	+	564	4	FSM	ENSMUSG00000053317.12	ENSMUST00000065678.6	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	2329	junction_2	60.4225859169308	16123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGCCTGTGCTTTATT	-22	True	NA	NA	False	AATAAA	-25	NA	47474657	47483242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_47474754_47474911_47475010_47480130_47480233_47482974
ENSMUST00000065692.14	chr11	+	3269	21	FSM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_14	24.9631728752577	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAAACTGCACCTTAT	2250	False	NA	NA	False	ATTAAA	-20	NA	83193599	83293838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ENSMUST00000065694.8	chr1	+	3085	21	FSM	ENSMUSG00000053333.16	ENSMUST00000065694.8	3085	21	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	12.4998999996	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTCTGTGTAGATGCC	NA	False	NA	12	True	AATAAA	-13	NA	86631564	86977814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
ENSMUST00000065698.7	chr5	+	3133	3	FSM	ENSMUSG00000053334.7	ENSMUST00000065698.7	3133	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	4.5	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACATTGCGTTGTCTCA	715	False	NA	NA	False	AATAAA	-11	NA	113873863	113878661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_113874111_113874881_113875234_113876127
ENSMUST00000065778.13	chr9	+	4711	20	FSM	ENSMUSG00000032571.15	ENSMUST00000065778.13	4711	20	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	21.4158146964708	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGATTTTTTTGGAGAA	NA	False	NA	32	True	AGTAAA	-23	NA	105520368	105564856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ENSMUST00000065784.6	chr8	-	3104	12	FSM	ENSMUSG00000033658.17	ENSMUST00000065784.6	3104	12	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_11	90.7354705715175	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTGTGGATCAAACT	NA	False	NA	NA	False	AATAAA	-12	NA	111758383	111733290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111758253
ENSMUST00000065793.12	chr3	+	1893	12	Antisense	novelGene_ENSMUSG00000053398.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCAGAAATGCTTAAACTC	NA	False	NA	NA	False	NA	NA	NA	98220485	98247306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr3_+_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
ENSMUST00000065806.5	chrX	-	2867	1	FSM	ENSMUSG00000091736.4	ENSMUST00000065806.5	2867	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATAGCTTGCTTGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	156351981	156349114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_156349100_156352000
ENSMUST00000065865.10	chr14	+	937	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	118.776758531907	2806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGCTCATTCAAAAC	NA	False	NA	22	True	AATAAA	-16	NA	8508485	8520751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUST00000065871.14	chr17	+	4525	6	FSM	ENSMUSG00000061544.14	ENSMUST00000065871.14	4525	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	72.3756865252413	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGACTTGTATCATAG	NA	False	NA	11	True	AATAAA	-25	NA	21952704	21967949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_21952940_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ENSMUST00000065889.10	chr2	-	3471	21	FSM	ENSMUSG00000027014.15	ENSMUST00000065889.10	3471	21	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_20	67.1203955590251	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCAGTGAGGTACTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	77776719	77725996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77770645_77770707_77776493
ENSMUST00000065896.9	chr4	-	2842	20	FSM	ENSMUSG00000028678.14	ENSMUST00000065896.9	2842	20	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_14	29.7897526488705	766	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCAGATTCTGTGTGA	NA	False	NA	88	True	AATAAA	-17	NA	117039836	117016835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ENSMUST00000065917.16	chr10	+	1486	16	FSM	ENSMUSG00000058799.17	ENSMUST00000065917.16	1486	16	0	0	0	0	multi-exon	TRUE	canonical	3	684	junction_15	463.449884621364	3324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309083	111332745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ENSMUST00000065928.11	chr4	+	3484	13	FSM	ENSMUSG00000028252.21	ENSMUST00000065928.11	3484	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	125.983023547707	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTTCTTTTTAATTT	-5	True	NA	NA	False	NA	NA	NA	21727700	21750546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482_21747577_21748136
ENSMUST00000066052.12	chr5	-	1429	5	FSM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_4	25.951878544722	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGACTTTTTGCCTGTC	NA	False	NA	-6	True	NA	NA	NA	139446257	139345493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_139346486_139347061_139347144_139349727_139349919_139441171_139441302_139446223
ENSMUST00000066070.7	chr7	-	774	8	FSM	ENSMUSG00000053565.11	ENSMUST00000066070.7	774	8	0	0	0	0	multi-exon	FALSE	canonical	3	2641	junction_1	370.651715060852	17942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTGTCTCTTGCCTGTA	NA	False	NA	-4	True	AATAAA	-17	NA	28681239	28670796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
ENSMUST00000066127.13	chr16	-	3790	9	FSM	ENSMUSG00000003166.21	ENSMUST00000066127.13	3790	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	147.176552140618	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGCATGGTCAGTTCT	NA	False	NA	-8	True	AATAAA	-12	NA	17709521	17658224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ENSMUST00000066160.3	chr5	+	2276	15	FSM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	48.9833895211386	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTGTTGTGGCTTTTC	9199	False	NA	31	True	AAAACA	-7	NA	110987865	111022011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
ENSMUST00000066208.13	chr18	-	1914	18	FSM	ENSMUSG00000053644.14	ENSMUST00000066208.13	1914	18	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_7	37.2351547251364	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGGTTTGGTGAGTTTTT	NA	False	NA	-5	True	ATTAAA	-30	NA	56695381	56659815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
ENSMUST00000066237.10	chr11	-	1922	15	FSM	ENSMUSG00000020182.17	ENSMUST00000066237.10	1922	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	28.9743905220187	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTGAGTAAGCGTCTT	5550	False	NA	-1	True	AATAAA	-21	NA	11848044	11764100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11848007
ENSMUST00000066264.13	chr7	-	1267	10	Antisense	novelGene_ENSMUSG00000053898.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3562	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAAGGGCAAACGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28531672	28524641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr7_-_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530886_28531141_28531293_28531428
ENSMUST00000066272.6	chr18	-	3302	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	0	0	0	0	multi-exon	FALSE	canonical	3	1260	junction_1	0	4818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGAATCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	37777257	37773543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_37776586_37776997
ENSMUST00000066352.6	chr2	+	952	5	FSM	ENSMUSG00000053746.9	ENSMUST00000066352.6	952	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	3.34477204006491	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAAGCTTCCTGTGGGGT	8191	False	NA	6	True	ATTAAA	-16	NA	32665797	32667609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_32665908_32666315_32666536_32666718_32666819_32666994_32667041_32667133
ENSMUST00000066379.11	chr6	-	1550	8	FSM	ENSMUSG00000053768.14	ENSMUST00000066379.11	1550	8	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_3	29.0320020470023	6240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGACTAAGACTGGCC	NA	False	NA	-10	True	AATAAA	-25	NA	33037195	32769151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ENSMUST00000066386.6	chr3	+	2394	3	FSM	ENSMUSG00000053769.6	ENSMUST00000066386.6	2394	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	5.5	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGCTTTAGTGGTTTTA	8611	False	NA	17	True	ATTAAA	-13	NA	95041398	95046829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95042308_95044935_95045298_95045706
ENSMUST00000066391.14	chr11	-	3898	32	FSM	ENSMUSG00000023764.19	ENSMUST00000066391.14	3898	32	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_15	27.928964448237	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTACTTTTCATACAAAAT	7979	False	NA	5	True	AATGAA	-22	NA	3143463	3081880	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ENSMUST00000066401.7	chr7	-	1922	9	FSM	ENSMUSG00000007891.17	ENSMUST00000066401.7	1922	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	696.59088378689	5584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTATTGGTGTGCTCTG	8865	False	NA	-8	True	AATAAA	-17	NA	141941594	141929653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931087_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ENSMUST00000066439.8	chr19	+	3543	22	FSM	ENSMUSG00000053799.9	ENSMUST00000066439.8	3543	22	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_16	11.2298193902402	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCGGAGATTCTCATTTC	1869	False	NA	29	True	ATTAAA	-34	NA	37538865	37672507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_37539014_37558830_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
ENSMUST00000066469.14	chr8	+	1300	10	FSM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	0	0	0	0	multi-exon	FALSE	canonical	3	1246	junction_3	49.1055803823899	4295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	452	False	NA	26	True	AATAAA	-15	NA	70755167	70765640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ENSMUST00000066496.10	chr11	-	3927	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_5	15.4090882274066	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTGTTTATCTGGCTTA	9458	False	NA	NA	False	NA	NA	NA	6150415	6055690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ENSMUST00000066544.5	chr5	+	1565	6	FSM	ENSMUSG00000053856.8	ENSMUST00000066544.5	1565	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	5.93295878967653	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGTGTGTGTGGGACCC	NA	False	NA	5	True	AATAAA	-17	NA	31265662	31269870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31265766_31266230_31266347_31266838_31267053_31267521_31267664_31268456_31268524_31268947
ENSMUST00000066559.6	chr2	+	3397	18	FSM	ENSMUSG00000027353.15	ENSMUST00000066559.6	3397	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	44.3952832682774	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGAAGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	132658060	132686117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_132658386_132658993_132659166_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ENSMUST00000066560.13	chr9	-	3688	19	FSM	ENSMUSG00000036395.16	ENSMUST00000066560.13	3688	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	5.66884489725515	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTTTTTGTGTCTGGGG	NA	False	NA	NA	False	AATAAA	-15	NA	26717764	26674340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_26676120_26676397_26676515_26676875_26676988_26677280_26677369_26678372_26678452_26678690_26678763_26679015_26679157_26679714_26679822_26680331_26680413_26681035_26681174_26682323_26682409_26685268_26685340_26689314_26689397_26691969_26692063_26703077_26703187_26705378_26705475_26706081_26706151_26707701_26707900_26717593
ENSMUST00000066568.6	chr3	-	3518	4	FSM	ENSMUSG00000053870.8	ENSMUST00000066568.6	3518	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	2.16024689946929	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAAATTTTTGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	154799040	154790554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_154793707_154795748_154795842_154797027_154797196_154798935
ENSMUST00000066587.12	chr11	-	3987	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_12	15.262593015675	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	NA	False	NA	1	True	AATAAA	-15	NA	116089871	116062713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
ENSMUST00000066594.4	chr8	+	2718	9	FSM	ENSMUSG00000053886.5	ENSMUST00000066594.4	2718	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	6.37867541108654	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGAGTTGCCTTGGTCA	NA	False	NA	17	True	NA	NA	NA	68729218	68800346	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_68729525_68734684_68735064_68746954_68747112_68749305_68749478_68781903_68782013_68783686_68783889_68787716_68787848_68798604_68798826_68799305
ENSMUST00000066597.13	chr8	-	2991	3	FSM	ENSMUSG00000055707.14	ENSMUST00000066597.13	2991	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	2	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGAGCAGACCTGTGCT	NA	False	NA	-18	True	AATAAA	-16	NA	70929555	70902917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70905670_70908115_70908299_70929499
ENSMUST00000066601.13	chr9	+	4432	26	FSM	ENSMUSG00000032115.15	ENSMUST00000066601.13	4432	26	0	0	0	0	multi-exon	TRUE	canonical	3	476	junction_1	89.8853847964173	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGCTTCTTCCCTCC	NA	False	NA	7	True	AATAAA	-23	NA	44290786	44303666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ENSMUST00000066640.5	chr2	-	1394	2	FSM	ENSMUSG00000053916.5	ENSMUST00000066640.5	1394	2	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	0	1036	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTAGAGTGATCTTGT	NA	False	NA	-1	True	ATTAAA	-38	NA	150881318	150871604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_150872837_150881156
ENSMUST00000066650.12	chr9	+	2261	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCCATCCTGCTGCAT	6406	False	NA	49	True	TATAAA	-1	NA	99457851	99466554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
ENSMUST00000066701.13	chr12	+	889	6	FSM	ENSMUSG00000064215.14	ENSMUST00000066701.13	889	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	3.54400902933387	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCATTGTTCCCCTTTC	6587	False	NA	5	True	AATAAA	-19	NA	103400470	103406498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_103400610_103401680_103401833_103402821_103402942_103403934_103403965_103405659_103405822_103406212
ENSMUST00000066760.8	chr11	-	2219	11	FSM	ENSMUSG00000005204.13	ENSMUST00000066760.8	2219	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	281.644616493907	1497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATGCAAGTGGTGGTC	8292	False	NA	-11	True	AATAAA	-11	NA	69572910	69563946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572814
ENSMUST00000066804.5	chr13	+	1367	8	FSM	ENSMUSG00000054021.7	ENSMUST00000066804.5	1367	8	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_7	21.27372625027	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTATTTTTTTGTACTT	NA	False	NA	9	True	ATTAAA	-21	NA	43524185	43548678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43548212
ENSMUST00000066834.8	chr7	+	1809	6	FSM	ENSMUSG00000054046.8	ENSMUST00000066834.8	1809	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	24.8161237907938	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTGTTTTGTTTTGT	NA	False	NA	17	True	CATAAA	-21	NA	43361990	43376958	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43362129_43363215_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
ENSMUST00000066921.10	chr5	+	2784	12	FSM	ENSMUSG00000054099.12	ENSMUST00000066921.10	2784	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	8.37055050175789	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTTGTGATTTGTAG	NA	False	NA	NA	False	ATTAAA	-18	NA	8472849	8504797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_8473040_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ENSMUST00000066983.13	chr16	-	2848	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATGGTGAGTCCTGTGC	NA	False	NA	-5	True	NA	NA	NA	45563318	45550087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
ENSMUST00000066984.14	chr13	-	1656	16	FSM	ENSMUSG00000021639.18	ENSMUST00000066984.14	1656	16	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_10	29.724213848122	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGTTTTTTTTCATTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	100629069	100605087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ENSMUST00000067033.8	chr15	-	2471	9	FSM	ENSMUSG00000022329.16	ENSMUST00000067033.8	2471	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	80.4851500278157	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAGTATTAGAAAAAGAC	NA	False	NA	NA	False	ACTAAA	-33	NA	35155896	34875818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35155672
ENSMUST00000067072.5	chr15	+	1166	4	FSM	ENSMUSG00000054196.8	ENSMUST00000067072.5	1166	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1.88561808316413	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGTTTATTTGTTTGA	NA	False	NA	NA	False	AATAAA	-18	NA	38940326	38950516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_38940555_38943877_38944100_38947660_38947878_38950017
ENSMUST00000067081.10	chr4	+	2595	20	FSM	ENSMUSG00000029062.15	ENSMUST00000067081.10	2595	20	0	0	0	0	multi-exon	TRUE	canonical	3	247	junction_2	74.7943440763884	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	3962	False	NA	23	True	ATTAAA	-28	NA	155709325	155734395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ENSMUST00000067137.14	chr6	+	2103	6	FSM	ENSMUSG00000054226.14	ENSMUST00000067137.14	2103	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	21.35790251874	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTTATTATG	3418	False	NA	22	True	NA	NA	NA	85892728	85907264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
ENSMUST00000067167.6	chr19	-	1402	14	FSM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	0	0	0	0	multi-exon	TRUE	canonical	3	295	junction_2	36.3583414649629	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGAGTCTTTCCT	NA	False	NA	-7	True	AATAAA	-20	NA	38212586	38176928	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
ENSMUST00000067215.9	chr15	-	2619	16	FSM	ENSMUSG00000054277.9	ENSMUST00000067215.9	2619	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	11.3927852413515	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTTGCCTGTGTTGTCA	3525	False	NA	-26	True	AATATA	-16	NA	83234448	83183939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
ENSMUST00000067240.11	chr4	-	2185	12	FSM	ENSMUSG00000000409.15	ENSMUST00000067240.11	2185	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	59.1335510476424	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTACTGCATACTT	NA	False	NA	0	True	NA	NA	NA	129452184	129442141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080_129450231_129450436_129450541_129450826_129450926_129451157_129451249_129451418_129451501_129451873
ENSMUST00000067272.9	chr12	-	590	3	FSM	ENSMUSG00000054302.16	ENSMUST00000067272.9	590	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	216.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGAAAAGGAGTGGTTA	NA	False	NA	-10	True	ATTAAA	-14	NA	54742682	54720255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_54720576_54739658_54739742_54742495
ENSMUST00000067298.5	chr3	-	488	3	FSM	ENSMUSG00000054312.7	ENSMUST00000067298.5	488	3	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_2	92.5	4480	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGCTGTCTTATTGGTC	NA	False	NA	NA	False	AATAAA	-37	NA	95778831	95769945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95770245_95777805_95777928_95778764
ENSMUST00000067386.14	chr7	+	2701	10	FSM	ENSMUSG00000049643.16	ENSMUST00000067386.14	2701	10	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_8	25.2899238218224	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	396	False	NA	NA	False	AATAAA	-20	NA	27252657	27281524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
ENSMUST00000067398.13	chr1	-	1914	11	FSM	ENSMUSG00000054387.14	ENSMUST00000067398.13	1914	11	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_9	94.8116026654966	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTATTCACTTCCAAA	NA	False	NA	-58	True	AATACA	-15	NA	132953094	132919091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ENSMUST00000067399.14	chr11	-	2864	13	FSM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_9	15.1867998238236	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGACTATAACATTCATA	NA	False	NA	2	True	AATAAA	-26	NA	121563979	121507022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ENSMUST00000067404.13	chr6	+	2766	6	FSM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	164.658434342125	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTCAGGGTTAATTT	NA	False	NA	29	True	AATAAA	-20	NA	146479356	146500696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146496673_146496788_146498792
ENSMUST00000067425.6	chr7	-	2684	3	FSM	ENSMUSG00000054381.6	ENSMUST00000067425.6	2684	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGATTTCTGCTCCTC	915	False	NA	NA	False	NA	NA	NA	126975222	126971708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126973871_126974560_126974675_126974814
ENSMUST00000067426.6	chr14	+	917	8	FSM	ENSMUSG00000037628.11	ENSMUST00000067426.6	917	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	72.4563204099335	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCAGCTAGACATACACT	NA	False	NA	72	True	NA	NA	NA	46997997	47009126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007292_47007394_47008857
ENSMUST00000067429.10	chr1	-	3490	12	FSM	ENSMUSG00000054387.14	ENSMUST00000067429.10	3490	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	148.060854140876	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACCACATGGTCAGG	NA	False	NA	NA	False	NA	NA	NA	132953086	132917582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132947091_132947170_132952985
ENSMUST00000067476.9	chr8	-	3466	5	FSM	ENSMUSG00000054408.10	ENSMUST00000067476.9	3466	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	423.496753234308	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGTTTATGTGTTTTT	NA	False	NA	-4	True	AATAAA	-38	NA	54983033	54973467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_54976431_54977975_54978092_54979485_54979563_54981376_54981451_54982797
ENSMUST00000067496.7	chr4	-	539	3	FSM	ENSMUSG00000054428.13	ENSMUST00000067496.7	539	3	0	0	0	0	multi-exon	FALSE	canonical	3	7869	junction_2	284	26403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGCCTTCTACTGTCT	9241	False	NA	-20	True	AATAAA	-19	NA	132260970	132257865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132258135_132260606_132260699_132260792
ENSMUST00000067545.8	chr17	+	4467	6	FSM	ENSMUSG00000054469.15	ENSMUST00000067545.8	4467	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	24.2866218317822	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGATTCTGTTTTT	NA	False	NA	16	True	AATAAA	-26	NA	73414988	73550363	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_73415173_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
ENSMUST00000067563.9	chr15	+	1383	6	FSM	ENSMUSG00000022359.11	ENSMUST00000067563.9	1383	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	11.5516232625549	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTTTTGAAGAATCTG	2660	False	NA	27	True	AATAAA	-17	NA	58004772	58022050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58015992_58016142_58016975_58017101_58021297
ENSMUST00000067631.7	chr2	-	3139	2	FSM	ENSMUSG00000049922.9	ENSMUST00000067631.7	3139	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATACAGCATGTTTTAT	NA	False	NA	NA	False	AATAAA	-24	NA	92290139	92283108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_92285120_92289011
ENSMUST00000067646.12	chr9	+	3549	20	FSM	ENSMUSG00000032178.15	ENSMUST00000067646.12	3549	20	0	0	0	0	multi-exon	FALSE	canonical	3	965	junction_18	395.630525194118	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCCTGTCTCAGGCCTG	NA	False	NA	115	True	AATAAA	-13	NA	21279166	21316656	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ENSMUST00000067663.14	chr2	+	1636	12	FSM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	0	0	0	0	multi-exon	FALSE	canonical	3	1724	junction_1	113.356309451931	6804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTCTTTCTCAGCCT	NA	False	NA	18	True	AATAAA	-19	NA	90884353	90889777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ENSMUST00000067664.10	chr11	+	2100	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	0	0	0	0	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	26506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTAACTATGGATCATTT	2991	False	NA	26	True	ATTAAA	-22	NA	75623694	75656671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ENSMUST00000067744.8	chr16	+	4425	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_2	152	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTTGTTTTGTGAGC	NA	False	NA	21	True	AATAAA	-30	NA	64672358	64679870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_64672600_64673161_64673389_64675913
ENSMUST00000067763.10	chrX	-	1032	8	FSM	ENSMUSG00000054626.12	ENSMUST00000067763.10	1032	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	69.0238054173031	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAGTGGCAAATAGTCC	NA	False	NA	NA	False	AATAAA	-13	NA	52799663	52785714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798236_52799598
ENSMUST00000067778.8	chr13	+	4038	3	FSM	ENSMUSG00000021360.17	ENSMUST00000067778.8	4038	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	29	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGTGGATATTTATTT	NA	False	NA	20	True	AATAAA	-25	NA	41071076	41114368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_41072278_41107051_41107148_41111627
ENSMUST00000067780.10	chr2	-	2999	16	FSM	ENSMUSG00000027201.17	ENSMUST00000067780.10	2999	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	210.706705055999	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965580	124929661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124955962_124955971_124957357_124957411_124958584_124958794_124965304
ENSMUST00000067786.9	chr8	+	3566	11	FSM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_6	45.0493063209635	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22966803	23059628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ENSMUST00000067801.14	chr17	-	2533	17	FSM	ENSMUSG00000024039.16	ENSMUST00000067801.14	2533	17	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_16	84.4695766237762	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTTGGTGTGAGTGTC	1872	False	NA	1	True	NA	NA	NA	31856212	31831596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852126_31856056
ENSMUST00000067826.15	chr17	+	2087	17	FSM	ENSMUSG00000055817.19	ENSMUST00000067826.15	2087	17	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_6	449.066236066574	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGTTTATTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	84013619	84122334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070342_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970_84100194_84107478_84107566_84111879_84112027_84122064
ENSMUST00000067836.9	chr7	-	3019	24	FSM	ENSMUSG00000054662.9	ENSMUST00000067836.9	3019	24	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	30.0592986723404	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGATCCAGTTTCTA	NA	False	NA	-8	True	AATAAA	-28	NA	140697719	140681124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ENSMUST00000067857.11	chr10	+	1442	10	FSM	ENSMUSG00000020085.16	ENSMUST00000067857.11	1442	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	41.9205597927	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCGATCCTCCTCCTTCG	NA	False	NA	NA	False	AATAAA	-21	NA	61551089	61575039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574806
ENSMUST00000067880.13	chr9	+	4593	16	FSM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_13	22.3632635264971	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	4950	False	NA	14	True	AATAAA	-19	NA	70586278	70687511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ENSMUST00000067888.14	chr6	-	2671	9	FSM	ENSMUSG00000029735.18	ENSMUST00000067888.14	2671	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	3.903123748999	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCAATGCTGTGGTATT	NA	False	NA	-6	True	ATTAAA	-19	NA	43643212	43321934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43642693_43642752_43643069
ENSMUST00000067902.13	chr4	-	990	3	FSM	ENSMUSG00000043257.16	ENSMUST00000067902.13	990	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	36	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCTGTCTTCTTGTTTT	NA	False	NA	-2	True	NA	NA	NA	133399958	133389564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_133390103_133397048_133397172_133399629
ENSMUST00000067925.8	chr8	+	2628	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	0	0	0	0	multi-exon	FALSE	canonical	3	4513	junction_1	1044.37167114969	37112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGTTCTGTTTTGCTT	NA	False	NA	5	True	AAAACA	-17	NA	57964940	57969033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ENSMUST00000067936.6	chr11	-	2150	6	FSM	ENSMUSG00000025132.14	ENSMUST00000067936.6	2150	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	1338.58961597646	7545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATTGTGTGGTCTGTGC	NA	False	NA	-15	True	AATAAA	-17	NA	120472206	120468934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120471815
ENSMUST00000067940.3	chrX	-	1224	9	FSM	ENSMUSG00000054727.3	ENSMUST00000067940.3	1224	9	0	0	0	0	multi-exon	FALSE	canonical	3	1101	junction_5	153.190241203544	3635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGACTTTAGTATATTT	NA	False	NA	-11	True	AGTAAA	-17	NA	52759798	52744867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
ENSMUST00000067990.8	chr14	+	618	3	FSM	ENSMUSG00000054763.10	ENSMUST00000067990.8	618	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	3	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCGTTTCAAATTCACC	NA	False	NA	28	True	AATAAA	-37	NA	63284439	63286059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_63284500_63284892_63285068_63285676
ENSMUST00000068004.13	chr19	+	4148	21	FSM	ENSMUSG00000024892.18	ENSMUST00000068004.13	4148	21	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_8	10.9748576300561	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGATCTGCTGCTTTTTT	1687	False	NA	83	True	NA	NA	NA	4560499	4671780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4560610_4565681_4565719_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ENSMUST00000068031.8	chr11	-	5221	36	FSM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	0	0	0	0	multi-exon	FALSE	canonical	3	1094	junction_4	183.786113485769	1840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCCTCTTATTTTAAC	NA	False	NA	0	True	AATAAA	-22	NA	98915015	98883768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ENSMUST00000068045.14	chr7	-	3877	21	FSM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	0	0	0	0	multi-exon	FALSE	canonical	3	997	junction_13	138.805763569097	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCATCTTCTCCC	NA	False	NA	-1	True	AATAAA	-24	NA	28661765	28592672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ENSMUST00000068056.12	chr17	+	1739	11	FSM	ENSMUSG00000019432.16	ENSMUST00000068056.12	1739	11	0	0	0	0	multi-exon	FALSE	canonical	3	2129	junction_1	149.184985839729	11361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTGTTCATGGCTTGA	NA	False	NA	37	True	AATGAA	-26	NA	35460721	35472683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ENSMUST00000068058.14	chr5	-	4557	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTTGGCTCCTATTT	NA	False	NA	NA	False	ATTAAA	-26	NA	74229092	74159386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
ENSMUST00000068071.12	chr9	+	2219	8	FSM	ENSMUSG00000054836.13	ENSMUST00000068071.12	2219	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	68.5809517196686	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTGTGTGTGTGTTCCT	2213	False	NA	6	True	AATAAA	-14	NA	110134271	110151170	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_110134418_110138103_110138271_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ENSMUST00000068282.7	chr17	-	3618	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	0	0	0	0	multi-exon	TRUE	canonical	3	301	junction_5	41.6619997386374	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGTGTTCTGAAATTAAA	3751	False	NA	-2	True	AATAAA	-18	NA	80203552	80155818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ENSMUST00000068326.14	chr5	+	2898	16	FSM	ENSMUSG00000032754.15	ENSMUST00000068326.14	2898	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	54.5084702897938	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	-4	True	NA	6	True	AATAAA	-22	NA	120649232	120672089	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ENSMUST00000068333.14	chr1	-	1951	17	FSM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	0	0	0	0	multi-exon	FALSE	canonical	3	979	junction_9	154.241693455434	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGCCAGCGTGTGGAACA	NA	False	NA	15	True	AATAAA	-36	NA	78465534	78401704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ENSMUST00000068407.6	chr15	+	1037	2	FSM	ENSMUSG00000055041.9	ENSMUST00000068407.6	1037	2	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_1	0	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTATTCTATTAGGGAA	NA	False	NA	NA	False	ATTAAA	-23	NA	76784109	76785505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76784193_76784551
ENSMUST00000068408.14	chr10	+	500	4	FSM	ENSMUSG00000063457.15	ENSMUST00000068408.14	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	5732	junction_1	1157.99510649513	145905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6342	False	NA	30	True	AATAAA	-21	NA	80128286	80129948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80128318_80128608_80128695_80129475_80129711_80129800
ENSMUST00000068452.10	chr8	-	8152	48	FSM	ENSMUSG00000036550.17	ENSMUST00000068452.10	8152	48	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	306.345213393528	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGATGGTTGTGAGCCAC	NA	False	NA	NA	False	NA	NA	NA	96534009	96446085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_96447114_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ENSMUST00000068532.10	chr14	+	1324	6	FSM	ENSMUSG00000055128.16	ENSMUST00000068532.10	1324	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	10.2097992144802	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGACACTGTCTTTGTC	537	False	NA	14	True	AATAAA	-24	NA	47069581	47091650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_47069837_47077613_47077754_47083330_47083509_47083641_47083790_47090835_47090944_47091155
ENSMUST00000068551.9	chrX	-	1500	9	FSM	ENSMUSG00000031362.18	ENSMUST00000068551.9	1500	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	125.099897581893	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCAGCTTTGAATGTCTC	NA	False	NA	NA	False	NA	NA	NA	72286674	72277293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72285789_72286219_72286267_72286581
ENSMUST00000068586.13	chr2	-	2445	15	FSM	ENSMUSG00000040434.17	ENSMUST00000068586.13	2445	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	34.8762389144289	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGAGTGTTTTGTCTGT	NA	False	NA	0	True	NA	NA	NA	92201402	92195390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
ENSMUST00000068641.8	chr7	+	1329	2	FSM	ENSMUSG00000055200.8	ENSMUST00000068641.8	1329	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	434	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAATTGTAATTAAATCT	NA	False	NA	84	True	AATAAA	-16	NA	27173192	27176789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27173297_27175564
ENSMUST00000068686.13	chr11	-	1621	6	FSM	ENSMUSG00000006056.14	ENSMUST00000068686.13	1621	6	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_5	66.2751838926155	546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATGTGAGTACACTATC	4211	False	NA	-2	True	NA	NA	NA	96002790	95990151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998256_95998431_96002762
ENSMUST00000068700.7	chr9	-	4163	6	FSM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_5	13.1969693490589	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCCTTACCATCTCC	5751	False	NA	-1	True	AATAAA	-20	NA	108455938	108449509	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299_108453782_108455692
ENSMUST00000068705.13	chr1	-	2171	5	FSM	ENSMUSG00000026566.16	ENSMUST00000068705.13	2171	5	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	201.827896981562	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	-1	True	AATACA	-19	NA	165462090	165419808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_165421247_165432178_165432312_165433177_165433392_165436006_165436174_165461871
ENSMUST00000068755.14	chrX	+	2823	5	FSM	ENSMUSG00000072964.15	ENSMUST00000068755.14	2823	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	79.1296404642407	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTGTGTATATGA	NA	False	NA	10	True	AATAAA	-21	NA	134786601	134791830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_134786847_134787593_134787676_134788009_134788067_134789120_134789229_134789499
ENSMUST00000068795.4	chr5	-	1648	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	0	0	0	0	multi-exon	FALSE	canonical	3	1678	junction_1	0	3330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCCTGTGTTTAGTTTA	NA	False	NA	41	True	AAGAAA	-22	NA	36954116	36952210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_36953289_36953546
ENSMUST00000068798.13	chr3	+	1500	6	FSM	ENSMUSG00000027942.18	ENSMUST00000068798.13	1500	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	198.067261302821	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGATCATTTCTTTAGA	NA	False	NA	7	True	AATAAA	-17	NA	89960177	89969749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89965791_89965959_89966048_89966108_89968944
ENSMUST00000068805.14	chr1	+	2009	15	FSM	ENSMUSG00000026427.17	ENSMUST00000068805.14	2009	15	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_5	43.4650340351123	2044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTATTTCTAATCTAAA	NA	False	NA	41	True	AATAAA	-22	NA	131080917	131101215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ENSMUST00000068822.4	chr4	-	3494	4	FSM	ENSMUSG00000028389.13	ENSMUST00000068822.4	3494	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	14.142135623731	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGTGGTATTTTATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	62126683	62107776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62110927_62122755_62122888_62123260_62123346_62126556
ENSMUST00000068825.8	chr5	+	3269	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	0	0	0	0	multi-exon	TRUE	canonical	3	384	junction_1	91.6660977100463	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGTCTGACGCAGTGA	NA	False	NA	11	True	AATAAA	-20	NA	24890821	24915376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ENSMUST00000068856.5	chr9	+	1391	9	FSM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	20.9105236663265	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCTTGTGGTTATTCGG	NA	False	NA	8	True	AATATA	-19	NA	56858161	56890490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
ENSMUST00000068892.15	chr8	-	3307	16	FSM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_15	813.355748325008	88335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCAATGTTTGAATGAC	NA	False	NA	NA	False	NA	NA	NA	26330815	26306023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330609
ENSMUST00000068916.16	chr8	+	1483	7	FSM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	15.9269164205337	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGTGTGTGTGAGT	NA	False	NA	17	True	AATAAA	-29	NA	26210063	26214914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
ENSMUST00000068944.9	chr9	-	3273	6	FSM	ENSMUSG00000050721.10	ENSMUST00000068944.9	3273	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	5.23832034148352	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGGCCCAAGCCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	65487322	65461665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_65464362_65465900_65466000_65466701_65466807_65471165_65471286_65480261_65480412_65487219
ENSMUST00000068947.14	chr5	+	3976	19	FSM	ENSMUSG00000029098.18	ENSMUST00000068947.14	3976	19	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	8.72982683351794	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	NA	False	NA	24	True	AATAAA	-15	NA	35740383	35771145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_35740479_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
ENSMUST00000068975.6	chr7	+	3901	5	FSM	ENSMUSG00000057101.9	ENSMUST00000068975.6	3901	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	15.0499169432924	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCACTTGTTTGATCTT	NA	False	NA	NA	False	AATAAA	-30	NA	23781348	23807138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_23781664_23784850_23784932_23797245_23797321_23800872_23800994_23803829
ENSMUST00000068996.13	chr7	-	1126	4	FSM	ENSMUSG00000040139.15	ENSMUST00000068996.13	1126	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	38.0292285252044	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGTCTGGCTTGGTGT	NA	False	NA	-7	True	ATTAAA	-14	NA	137012491	136977302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_136978081_136989099_136989163_136989268_136989431_137012368
ENSMUST00000069000.9	chr9	+	2482	7	FSM	ENSMUSG00000032392.12	ENSMUST00000069000.9	2482	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	17.0269394392142	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTTGTCTGTGACTG	NA	False	NA	NA	False	AATAAA	-15	NA	65121971	65146500	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65122146_65122630_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
ENSMUST00000069057.13	chr11	+	4547	32	FSM	ENSMUSG00000017774.20	ENSMUST00000069057.13	4547	32	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	33.5644192461903	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	8843	False	NA	15	True	AATAAA	-19	NA	75542335	75564736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ENSMUST00000069064.7	chr16	+	1297	5	FSM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_3	15.4171171105366	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGGTTTATAAAGTG	NA	False	NA	12	True	AATAAA	-16	NA	16964842	16966710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660_16965839_16966019
ENSMUST00000069077.10	chrX	+	1200	9	FSM	ENSMUSG00000067768.13	ENSMUST00000069077.10	1200	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	80.9281123899477	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257954	72266059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72258088_72258379_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ENSMUST00000069103.11	chrX	+	1304	9	FSM	ENSMUSG00000067768.13	ENSMUST00000069103.11	1304	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	98.081519028816	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257954	72266059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72258192_72258379_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ENSMUST00000069128.8	chr4	+	3069	3	FSM	ENSMUSG00000046667.15	ENSMUST00000069128.8	3069	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	12.5	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGGAAGAGAATTTCCT	16	False	NA	NA	False	AATAAA	-18	NA	12140316	12146731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_12140606_12143409_12143460_12144001
ENSMUST00000069187.12	chr13	+	3546	10	FSM	ENSMUSG00000021712.16	ENSMUST00000069187.12	3546	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	70.1851167790148	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGAGTTGTTATTCTAA	NA	False	NA	2	True	AATAAA	-12	NA	104315346	104339880	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ENSMUST00000069250.14	chr17	+	1749	5	FSM	ENSMUSG00000036036.16	ENSMUST00000069250.14	1749	5	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	1286.78268852981	2418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37313416	37321524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_37313670_37314177_37314208_37315688_37315796_37316941_37317087_37320310
ENSMUST00000069304.14	chr11	+	2225	14	FSM	ENSMUSG00000007850.17	ENSMUST00000069304.14	2225	14	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	115.462537790991	1611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268545	50277354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ENSMUST00000069330.14	chr9	-	1356	5	FSM	ENSMUSG00000001348.16	ENSMUST00000069330.14	1356	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	52.4374627532645	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	8912	False	NA	-19	True	AATAAA	-21	NA	22043111	22038022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22043032
ENSMUST00000069360.14	chrX	-	2216	8	FSM	ENSMUSG00000055653.14	ENSMUST00000069360.14	2216	8	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	17.9398086582293	1001	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTGGTCCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	51702798	51361302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_51361832_51403713_51403874_51454598_51454720_51476985_51477112_51485949_51486084_51517316_51518012_51671673_51671836_51702509
ENSMUST00000069419.8	chr19	+	1009	9	FSM	ENSMUSG00000025090.10	ENSMUST00000069419.8	1009	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.1686273153048	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGAGGTCCTTGTACAG	NA	False	NA	NA	False	AATACA	-14	NA	58500452	58541460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_58500498_58500742_58500868_58501047_58501134_58514279_58514397_58515703_58515870_58524992_58525095_58525693_58525797_58539859_58539948_58541283
ENSMUST00000069423.13	chr2	-	773	5	FSM	ENSMUSG00000027239.15	ENSMUST00000069423.13	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	1617	junction_4	477.436121381699	3169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762125	91760172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762038
ENSMUST00000069477.8	chrX	-	1685	4	FSM	ENSMUSG00000055746.10	ENSMUST00000069477.8	1685	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	9.56846672960488	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGCATTTGTAACACTA	NA	False	NA	NA	False	ATTAAA	-19	NA	153816288	153810196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_153811648_153812583_153812673_153815451_153815557_153816248
ENSMUST00000069486.13	chr17	+	1134	3	FSM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	34	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATATTTCTATTCTTAA	NA	False	NA	39	True	ATTAAA	-30	NA	80531869	80535926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_80532100_80533049_80533194_80535166
ENSMUST00000069503.13	chr11	+	1871	9	FSM	ENSMUSG00000020513.16	ENSMUST00000069503.13	1871	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	8.83087623059003	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCAGTCTGTTAAGTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	86435816	86458186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_86436057_86439608_86439829_86440149_86440298_86443613_86443831_86445898_86446131_86448550_86448716_86452061_86452203_86456510_86456695_86457862
ENSMUST00000069530.13	chr15	+	2114	13	FSM	ENSMUSG00000022471.15	ENSMUST00000069530.13	2114	13	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_9	64.3868516598433	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGCACTTTTCAGTAT	NA	False	NA	29	True	AATAAA	-15	NA	81900569	81924286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ENSMUST00000069533.12	chr4	-	2620	13	FSM	ENSMUSG00000028656.15	ENSMUST00000069533.12	2620	13	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_12	208.332399997909	2757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGATGTTTTCAGTA	NA	False	NA	-7	True	AATAAA	-25	NA	122779704	122752839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122779606
ENSMUST00000069537.3	chr7	-	1658	8	FSM	ENSMUSG00000030629.16	ENSMUST00000069537.3	1658	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	283.434475744953	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	84328559	84264261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84302089_84302251_84328517
ENSMUST00000069579.7	chr17	-	537	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	0	0	0	0	multi-exon	FALSE	canonical	3	7596	junction_3	2024.23060829431	43280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTCTCATTTTTATTT	NA	False	NA	-3	True	AGTAAA	-18	NA	24048110	24043711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
ENSMUST00000069580.12	chr6	-	1434	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_2	66.4266512779321	5278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8408	False	NA	NA	False	TATAAA	-15	NA	72339415	72336696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
ENSMUST00000069595.13	chr6	-	1191	4	FSM	ENSMUSG00000055850.13	ENSMUST00000069595.13	1191	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	437.683548798546	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72339299
ENSMUST00000069600.13	chr2	-	2612	17	FSM	ENSMUSG00000027634.15	ENSMUST00000069600.13	2612	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	53.8324948335111	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5927	False	NA	0	True	AATAAA	-22	NA	156833963	156769264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_156770802_156771851_156771891_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ENSMUST00000069674.6	chr4	-	974	3	FSM	ENSMUSG00000055900.15	ENSMUST00000069674.6	974	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	6.5	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTTTTTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	116413132	116410151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_116410927_116411964_116412101_116413069
ENSMUST00000069695.9	chr6	+	1546	8	FSM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	17.1583263538524	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGTTCTGGAGAAT	NA	False	NA	10	True	ATTAAA	-21	NA	72332429	72336745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_72332528_72333113_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
ENSMUST00000069722.13	chrX	+	1851	10	FSM	ENSMUSG00000009995.18	ENSMUST00000069722.13	1851	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_7	76.3282385490455	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGTAGGA	NA	False	NA	10	True	AATAAA	-23	NA	73326302	73333757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332267_73332321_73332710_73332789_73332904
ENSMUST00000069731.12	chrX	+	799	5	FSM	ENSMUSG00000062170.13	ENSMUST00000069731.12	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_2	146.787899705664	3796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATTCTTTTTGTTAAA	NA	False	NA	27	True	ATTAAA	-27	NA	67805444	67848173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_67805838_67807537_67807616_67815650_67815748_67847210_67847300_67848031
ENSMUST00000069772.16	chr7	+	2297	8	FSM	ENSMUSG00000002781.20	ENSMUST00000069772.16	2297	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	17.4414472344658	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTAGTGTGGCTGC	5492	False	NA	7	True	AATAAA	-14	NA	45546364	45566837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45546526_45546858_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
ENSMUST00000069803.5	chrX	-	450	3	FSM	ENSMUSG00000089996.7	ENSMUST00000069803.5	450	3	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_2	19	680	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTAACTTCCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	135858774	135856013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135856232_135857483_135857589_135858647
ENSMUST00000069929.13	chr13	-	899	8	FSM	ENSMUSG00000021493.16	ENSMUST00000069929.13	899	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	61.7060179647109	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGCCTCTGTCTCCC	NA	False	NA	-3	True	AATAAA	-16	NA	55661247	55654586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_55654937_55655142_55655180_55655300_55655438_55655676_55655694_55656592_55656624_55656704_55656857_55660124_55660232_55661179
ENSMUST00000069949.13	chr6	-	1647	10	FSM	ENSMUSG00000004980.17	ENSMUST00000069949.13	1647	10	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_1	2676.86493431088	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGCACTGCTACAACT	NA	False	NA	NA	False	AATAAA	-16	NA	51446874	51437911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_51438414_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUST00000069958.15	chr13	+	3929	3	FSM	ENSMUSG00000021360.17	ENSMUST00000069958.15	3929	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	65	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAATAGTGGATATTTATT	NA	False	NA	19	True	AATAAA	-24	NA	41040668	41114367	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_41041762_41107051_41107148_41111627
ENSMUST00000069968.13	chr13	-	1006	8	FSM	ENSMUSG00000021493.16	ENSMUST00000069968.13	1006	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	27.1751687376246	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCTCTGTCTCCCA	NA	False	NA	-2	True	AATAAA	-17	NA	55661251	55654585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_55654937_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
ENSMUST00000070039.14	chr17	-	1939	8	FSM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_3	15.727267365169	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGAGTCTTGAGTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	78725560	78685313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
ENSMUST00000070112.6	chr2	-	861	4	FSM	ENSMUSG00000026895.8	ENSMUST00000070112.6	861	4	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_2	59.9184631163235	4734	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTGTTTTATTATGCT	NA	False	NA	-1	True	ATTAAA	-15	NA	35939418	35926337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_35926654_35929723_35929890_35934361_35934526_35939203
ENSMUST00000070117.8	chr9	-	2853	20	FSM	ENSMUSG00000056167.9	ENSMUST00000070117.8	2853	20	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	120.736887991548	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATATGTTGCATGGTG	NA	False	NA	NA	False	NA	NA	NA	114469142	114414945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUST00000070141.7	chrX	-	1646	4	FSM	ENSMUSG00000079350.3	ENSMUST00000070141.7	1646	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	17.6823829464998	373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTCTTTAGTTTCTTG	NA	False	NA	-5	True	AATAAA	-16	NA	153778846	153768770	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_153770173_153771107_153771197_153777179_153777280_153778791
ENSMUST00000070143.13	chr15	-	4764	4	FSM	ENSMUSG00000022361.15	ENSMUST00000070143.13	4764	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	5.18544972870135	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTAATGTGGTCTGAGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	57939865	57910700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_57912182_57915619_57918479_57932714_57932826_57939552
ENSMUST00000070173.9	chr8	-	4883	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	0	0	0	0	multi-exon	TRUE	canonical	3	150	junction_1	24.3554408705735	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCATCCAGTGTCACCT	NA	False	NA	-5	True	AATAAA	-18	NA	71112388	71099084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
ENSMUST00000070210.6	chr19	-	2666	10	FSM	ENSMUSG00000013662.7	ENSMUST00000070210.6	2666	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	139.76408694654	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTTTCCCCACTTAGT	NA	False	NA	-18	True	AATAAA	-17	NA	32717186	32650221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32717041
ENSMUST00000070215.8	chr19	-	888	6	FSM	ENSMUSG00000056209.8	ENSMUST00000070215.8	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	39.9229257444892	8470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGGCTTTTTCAA	4887	False	NA	0	True	AATAAA	-27	NA	45738030	45736172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495_45737582_45737877
ENSMUST00000070257.14	chr11	+	2650	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGTGACATGCTCCAG	NA	False	NA	8	True	AATAAA	-20	NA	4587746	4633385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ENSMUST00000070326.14	chr9	+	2871	22	FSM	ENSMUSG00000038379.16	ENSMUST00000070326.14	2871	22	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_10	27.5493373131652	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACAGTGGTCAGTTTCT	NA	False	NA	10	True	AATAAA	-21	NA	83716770	83754439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ENSMUST00000070334.10	chr11	+	1404	7	FSM	ENSMUSG00000034793.16	ENSMUST00000070334.10	1404	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	57.3044985629885	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCTTGTCTGTGCTC	NA	False	NA	5	True	AATAAA	-19	NA	102080445	102084907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_102080479_102080696_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
ENSMUST00000070487.12	chr5	+	1606	7	FSM	ENSMUSG00000029625.17	ENSMUST00000070487.12	1606	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	315.629881700422	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	23	True	ATTAAA	-15	NA	145104033	145118851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112920_145113015_145114039_145114113_145115645_145115739_145117945
ENSMUST00000070515.2	chr14	-	2035	19	FSM	ENSMUSG00000022040.9	ENSMUST00000070515.2	2035	19	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_15	18.7001188350354	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTTTCTTGTGTTCTTG	NA	False	NA	-5	True	AATAAA	-16	NA	66361949	66321825	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361783
ENSMUST00000070522.14	chr9	+	3649	19	FSM	ENSMUSG00000032374.15	ENSMUST00000070522.14	3649	19	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_10	9.44264688775947	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCCTCTCTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	92424275	92490481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ENSMUST00000070532.8	chr4	+	823	4	FSM	ENSMUSG00000028773.9	ENSMUST00000070532.8	823	4	0	0	0	0	multi-exon	FALSE	canonical	3	4337	junction_3	149.244765402342	25473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTTGGTCCTC	NA	False	NA	31	True	AATAAA	-20	NA	130202387	130209256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_130202644_130206083_130206257_130207746_130207849_130208964
ENSMUST00000070565.15	chr12	-	1693	12	FSM	ENSMUSG00000056458.17	ENSMUST00000070565.15	1693	12	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_11	66.0974737267458	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7660	False	NA	-3	True	AATATA	-18	NA	110807373	110774231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
ENSMUST00000070575.14	chr11	-	3500	10	FSM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	0	0	0	0	multi-exon	TRUE	canonical	3	176	junction_1	174.428237039028	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	1014	False	NA	-11	True	AATAAA	-22	NA	120881918	120852574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUST00000070597.13	chr6	+	3027	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	54.9894535342915	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTGATATCTGAAATTT	NA	False	NA	NA	False	AATATA	-25	NA	72575457	72585408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ENSMUST00000070658.16	chr16	+	3138	17	FSM	ENSMUSG00000022517.18	ENSMUST00000070658.16	3138	17	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_15	100.835804033091	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2927	False	NA	14	True	AATAAA	-15	NA	4704115	4756160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ENSMUST00000070726.10	chr18	-	3882	10	FSM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	10.1153837126587	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTGTTCTCTTTCTTCT	NA	False	NA	0	True	ATTAAA	-18	NA	24736874	24712937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
ENSMUST00000070755.13	chr4	+	2870	15	FSM	ENSMUSG00000078773.12	ENSMUST00000070755.13	2870	15	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_12	66.7496464868725	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	25	True	NA	19	True	AGTAAA	-16	NA	11558971	11615805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ENSMUST00000070785.16	chr13	-	2561	6	FSM	ENSMUSG00000021327.20	ENSMUST00000070785.16	2561	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	21.2452347598232	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGGTTCTTACTTGGG	NA	False	NA	2	True	AATAAA	-23	NA	21586883	21571172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580748_21586841
ENSMUST00000070878.9	chr19	-	642	6	FSM	ENSMUSG00000056629.17	ENSMUST00000070878.9	642	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_5	200.859752065963	3144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTGAGTCTGTATTTCT	NA	False	NA	-3	True	TTTAAA	-35	NA	6957808	6955108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956546_6957761
ENSMUST00000070888.14	chr17	-	3358	9	FSM	ENSMUSG00000024142.16	ENSMUST00000070888.14	3358	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_8	10.0374299499424	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGAGGCCGATTGCTT	9587	False	NA	-2	True	AATAAA	-15	NA	24698052	24692526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
ENSMUST00000070990.8	chr6	-	2122	12	FSM	ENSMUSG00000056698.12	ENSMUST00000070990.8	2122	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	7.42677755109095	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTCTGGTATTTTCTTC	NA	False	NA	-11	True	AATAAA	-11	NA	72575326	72542916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72575304
ENSMUST00000070996.11	chr11	-	1373	7	FSM	ENSMUSG00000078812.11	ENSMUST00000070996.11	1373	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	9665.3113547021	31134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	9941	False	NA	-15	True	AATAAA	-20	NA	69812212	69807545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69810274_69810305_69811988
ENSMUST00000071006.9	chr17	+	758	6	FSM	ENSMUSG00000024217.11	ENSMUST00000071006.9	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	1664	junction_1	167.935225607971	13527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCGTGTCCCTGTCCCTT	NA	False	NA	18	True	AATAAA	-20	NA	28059060	28070939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_28059144_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
ENSMUST00000071044.13	chr6	+	1247	10	FSM	ENSMUSG00000056737.15	ENSMUST00000071044.13	1247	10	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_1	22.7389913671443	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	False	NA	12	True	AATAAA	-23	NA	72521373	72539966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_72521450_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ENSMUST00000071057.14	chr5	+	2799	14	FSM	ENSMUSG00000029389.18	ENSMUST00000071057.14	2799	14	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	12.5669803088427	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATCATTTTTTTTCTCC	NA	False	NA	5	True	AATAAA	-18	NA	124690926	124707723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ENSMUST00000071068.9	chr11	-	473	2	FSM	ENSMUSG00000051355.19	ENSMUST00000071068.9	473	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGGGTAAAAAAGAGAAACC	NA	False	NA	-31	True	AATATA	-10	NA	22932252	22849758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_22850058_22932078
ENSMUST00000071081.13	chr5	+	1311	8	FSM	ENSMUSG00000029152.14	ENSMUST00000071081.13	1311	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	338.614704889417	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGGCTTTGTTTGAA	NA	False	NA	31	True	AATAAA	-32	NA	73450126	73471300	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464142_73470785
ENSMUST00000071087.12	chr1	+	4355	30	FSM	ENSMUSG00000056763.17	ENSMUST00000071087.12	4355	30	0	0	0	0	multi-exon	FALSE	canonical	2	35	junction_1	28.6386316840114	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCAGTGTCGGTTTCTTT	NA	False	NA	4	True	AATAAA	-17	NA	10108441	10206993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_10108570_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ENSMUST00000071095.14	chr12	-	2755	13	FSM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_9	51.1017503505397	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTGTTCCTTGTC	NA	False	NA	0	True	ATTAAA	-19	NA	108145573	108072689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ENSMUST00000071106.6	chr12	+	3829	9	FSM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	8.71421252896669	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTTGATATATCCT	NA	False	NA	NA	False	AATGAA	-23	NA	86288648	86338144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
ENSMUST00000071118.7	chr13	-	1030	1	FSM	ENSMUSG00000057762.7	ENSMUST00000071118.7	1030	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2663	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAACGGCCGGGCATGGT	NA	False	NA	NA	False	NA	NA	NA	97235745	97234715	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_97234700_97235700
ENSMUST00000071134.4	chr8	+	1868	4	FSM	ENSMUSG00000062380.5	ENSMUST00000071134.4	1868	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	7.03957069398096	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTATTGGAGATTTCT	NA	False	NA	27	True	AATAAA	-27	NA	124138162	124148754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124138402_124144831_124144941_124145678_124145790_124147345
ENSMUST00000071207.14	chr7	+	1698	11	FSM	ENSMUSG00000011658.17	ENSMUST00000071207.14	1698	11	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	12.7373466624725	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGGGCTCTTTGCTGTCG	NA	False	NA	26	True	AATAAA	-37	NA	44545502	44550048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44547926_44548125_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
ENSMUST00000071215.5	chr14	+	616	3	FSM	ENSMUSG00000063787.5	ENSMUST00000071215.5	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	1953	junction_1	51.5	9314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCATTTCTTCTAATT	NA	False	NA	33	True	AATAAA	-16	NA	20753073	20754493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_20753266_20753357_20753477_20754188
ENSMUST00000071230.8	chr12	+	3405	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	0	0	0	0	multi-exon	FALSE	canonical	3	3896	junction_3	411.382487498445	12171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTTAAGCCAGC	NA	False	NA	NA	False	NA	NA	NA	78908592	78933784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ENSMUST00000071280.8	chr3	-	1777	6	FSM	ENSMUSG00000040374.14	ENSMUST00000071280.8	1777	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	21.3672646822189	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATGATTGTGCATTTAT	NA	False	NA	-4	True	AATAAA	-16	NA	5641188	5625563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5635546_5635690_5641097
ENSMUST00000071320.6	chr13	-	894	4	FSM	ENSMUSG00000074830.5	ENSMUST00000071320.6	894	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	65.3469373591618	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGTAATCAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	66846307	66818834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_66819455_66821007_66821069_66821267_66821395_66846221
ENSMUST00000071329.8	chr7	-	1899	9	FSM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_4	24.6373699895098	469	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTCCTTCGTCTCTG	9682	False	NA	-9	True	AGTAAA	-19	NA	25358406	25329370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25358057
ENSMUST00000071402.7	chr3	+	5951	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTAGTTCTTTGTTG	NA	False	NA	17	True	AATAAA	-25	NA	129326034	129432144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
ENSMUST00000071442.12	chr2	+	1485	9	FSM	ENSMUSG00000015094.17	ENSMUST00000071442.12	1485	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	4.24264068711928	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTTCTGGGTTCACTGA	3126	False	NA	12	True	ATTAAA	-20	NA	25293082	25299506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_25293378_25296226_25296374_25297607_25297749_25297852_25298027_25298125_25298193_25298271_25298360_25298618_25298699_25298916_25299014_25299110
ENSMUST00000071457.12	chr7	-	702	5	FSM	ENSMUSG00000030538.16	ENSMUST00000071457.12	702	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	297.709904941035	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2240	False	NA	-12	True	AATAAA	-15	NA	79882372	79876906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79882257
ENSMUST00000071462.7	chr15	-	1059	7	FSM	ENSMUSG00000022474.16	ENSMUST00000071462.7	1059	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	406.121355699938	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845070	81835308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81842096_81842112_81844915
ENSMUST00000071465.9	chr11	+	2270	7	FSM	ENSMUSG00000018347.17	ENSMUST00000071465.9	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	5.11262055005932	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCCTTGTAGCTGCCTT	NA	False	NA	14	True	AATAAA	-20	NA	65698000	65720064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713650_65713765_65718867
ENSMUST00000071492.9	chr6	+	1643	3	FSM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	0	0	0	0	multi-exon	FALSE	canonical	3	1740	junction_2	62	3664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTCTTATGGGTAGTG	8617	False	NA	32	True	AATAAA	-16	NA	86342627	86347040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_86342802_86343591_86343733_86345712
ENSMUST00000071539.10	chr11	-	2664	10	FSM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_5	113.78341999899	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7769	False	NA	-2	True	AATAAA	-19	NA	113456582	113135678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ENSMUST00000071544.11	chr4	+	942	6	FSM	ENSMUSG00000028483.14	ENSMUST00000071544.11	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_3	22.8875512014719	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTCTAGTCCCCTTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	83335967	83360323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123
ENSMUST00000071555.13	chr11	-	1952	6	FSM	ENSMUSG00000062825.16	ENSMUST00000071555.13	1952	6	0	0	0	0	multi-exon	FALSE	canonical	3	5636	junction_4	454.292680988809	54996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTTTTTCTGGTTTGG	NA	False	NA	-21	True	AATAAA	-18	NA	120239368	120236515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
ENSMUST00000071561.7	chr4	-	1547	3	FSM	ENSMUSG00000036078.17	ENSMUST00000071561.7	1547	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	290.5	1551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTTCCTTATGTGTCTAA	3747	False	NA	NA	False	AATAAA	-17	NA	41741359	41738492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41739581_41740775_41740977_41741101
ENSMUST00000071564.14	chr2	-	3567	21	FSM	ENSMUSG00000058594.16	ENSMUST00000071564.14	3567	21	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_20	31.6521721213569	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782393	11747385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ENSMUST00000071592.12	chr8	+	3472	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	0	0	0	0	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	2966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTTGTCTTTTAAAAC	1819	False	NA	NA	False	ATTAAA	-7	NA	106937567	106979426	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ENSMUST00000071664.12	chr3	-	1276	10	FSM	ENSMUSG00000005625.16	ENSMUST00000071664.12	1276	10	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_3	370.873576676127	5842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCAAATAGTGATAGCT	NA	False	NA	-13	True	AATAAA	-22	NA	94949863	94940007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ENSMUST00000071667.9	chrX	-	1712	4	FSM	ENSMUSG00000040749.12	ENSMUST00000071667.9	1712	4	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_3	112.11402925395	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCAGGTTTTTCTCACTT	NA	False	NA	-18	True	AATAAA	-15	NA	162859146	162853700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859110
ENSMUST00000071698.13	chr19	-	3228	12	FSM	ENSMUSG00000025198.17	ENSMUST00000071698.13	3228	12	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_11	39.5783562189201	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGTGTTCTATTTTC	NA	False	NA	-2	True	AATAAA	-19	NA	44058214	44023382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058027
ENSMUST00000071704.4	chr12	+	875	11	FSM	ENSMUSG00000060073.10	ENSMUST00000071704.4	875	11	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_2	1129.97747322679	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGATTTTCATTAAATTTTG	4814	False	NA	-25	True	NA	NA	NA	71021488	71041249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_71021542_71025506_71025590_71030097_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUST00000071745.4	chr6	+	943	1	FSM	ENSMUSG00000063171.5	ENSMUST00000071745.4	943	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28339	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTGCATATGTTTC	NA	False	NA	13	True	ATTAAA	-17	NA	148256153	148257096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_148256200_148257100
ENSMUST00000071792.7	chr15	+	1043	5	FSM	ENSMUSG00000063236.7	ENSMUST00000071792.7	1043	5	0	0	0	0	multi-exon	TRUE	canonical	1	74	junction_2	101.489839392917	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGATGGTGTGAGAGA	NA	False	NA	21	True	AATAAA	-13	NA	76832705	76834929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76832745_76832828_76833120_76833267_76833353_76833743_76833891_76834448
ENSMUST00000071812.11	chr3	+	5756	38	FSM	ENSMUSG00000028068.15	ENSMUST00000071812.11	5756	38	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_11	23.9826757536325	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCGTTGTTGCTATAG	NA	False	NA	19	True	AATAAA	-20	NA	87989277	88028355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ENSMUST00000071841.7	chr17	-	2100	12	FSM	ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_11	42.5343808432544	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCCTATTTCTGGCGAC	NA	False	NA	0	True	TATAAA	-17	NA	46991830	46985475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ENSMUST00000071848.7	chrX	+	842	6	FSM	ENSMUSG00000062170.13	ENSMUST00000071848.7	842	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	319.056484027515	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATTCTTTTTGTTAAA	NA	False	NA	27	True	ATTAAA	-27	NA	67805539	67848173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_67805838_67807537_67807616_67812561_67812700_67815650_67815748_67847210_67847300_67848031
ENSMUST00000071858.5	chr12	+	1526	4	FSM	ENSMUSG00000071379.3	ENSMUST00000071858.5	1526	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	8.52447456836295	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGAGTTTCCTGTGT	8624	False	NA	17	True	AATAAA	-5	NA	17740856	17841934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_17741048_17836147_17836550_17837545_17837652_17841107
ENSMUST00000071876.13	chr15	-	997	5	FSM	ENSMUSG00000064284.13	ENSMUST00000071876.13	997	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	106.509389257473	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8086	False	NA	0	True	ATTAAA	-15	NA	85695897	85691172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695839
ENSMUST00000071881.10	chr5	+	952	4	FSM	ENSMUSG00000036639.13	ENSMUST00000071881.10	952	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	90.7450641449256	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTGTGACTACAGCG	NA	False	NA	10	True	NA	NA	NA	140317614	140323892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_140317711_140320209_140320375_140321067_140321214_140323347
ENSMUST00000071891.12	chr11	+	2771	25	FSM	ENSMUSG00000020549.15	ENSMUST00000071891.12	2771	25	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_24	61.5767221304718	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTGACAACAGTTTGTA	NA	False	NA	10	True	AATAAA	-18	NA	64869863	64892895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820_64892040_64892657
ENSMUST00000071898.7	chr15	-	4518	37	FSM	ENSMUSG00000034022.9	ENSMUST00000071898.7	4518	37	0	0	0	0	multi-exon	TRUE	canonical	3	484	junction_25	49.8187687746518	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTGGTCATTGTGT	NA	False	NA	-2	True	TATAAA	-27	NA	76491791	76480005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ENSMUST00000071921.13	chr5	-	3806	18	FSM	ENSMUSG00000042508.17	ENSMUST00000071921.13	3806	18	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_6	37.7529760049699	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGAATTCCTTGCT	NA	False	NA	66	True	NA	NA	NA	9211776	9168800	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ENSMUST00000071926.5	chr13	+	1800	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	0	0	0	0	multi-exon	FALSE	canonical	3	1274	junction_1	87.1250567299906	3260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGACATGTAATACTGT	NA	False	NA	NA	False	AATAAA	-14	NA	43551865	43556337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ENSMUST00000071986.13	chr7	-	566	4	FSM	ENSMUSG00000089661.10	ENSMUST00000071986.13	566	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	9.2736184954957	606	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCTCTTTGGTTTTTG	NA	False	NA	0	True	AATACA	-18	NA	26880574	26879166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_26879260_26879593_26879705_26880124_26880259_26880346
ENSMUST00000071991.6	chr9	-	619	3	FSM	ENSMUSG00000060461.6	ENSMUST00000071991.6	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	178157	junction_1	1580.5	546672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275459	78274333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_78274577_78275002_78275186_78275266
ENSMUST00000072020.9	chr10	-	2015	14	FSM	ENSMUSG00000034758.13	ENSMUST00000072020.9	2015	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	15.2183321404185	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81436734	81426738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
ENSMUST00000072040.7	chr12	+	1509	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAATCTTTAGTCGTCA	NA	False	NA	NA	False	ATTAAA	-42	NA	105976486	106041479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ENSMUST00000072080.10	chr3	+	4142	15	FSM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	0	0	0	0	multi-exon	TRUE	canonical	3	641	junction_2	81.4479926714224	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGTAGTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	157742298	157774124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ENSMUST00000072119.15	chr13	-	2489	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	0	0	0	0	multi-exon	FALSE	canonical	3	2476	junction_6	457.563588477055	7554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGGTCGGCCAACTCCC	NA	False	NA	76	True	AATAAA	-19	NA	100923078	100915157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ENSMUST00000072154.9	chr12	-	2339	4	FSM	ENSMUSG00000021120.12	ENSMUST00000072154.9	2339	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	16.0485374896143	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGACTTGTTTTTTTAT	NA	False	NA	-1	True	AATAAA	-30	NA	79136425	79127437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_79129271_79130389_79130474_79132420_79132631_79136213
ENSMUST00000072167.10	chrX	+	799	4	FSM	ENSMUSG00000096788.9	ENSMUST00000072167.10	799	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	24.1246761636296	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTGTTTTGTGCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	36712104	36723466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36712216_36712377_36712790_36720942_36720989_36723236
ENSMUST00000072232.9	chr9	-	3667	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGCTGTATGCCACATTA	NA	False	NA	71	True	AATAAA	-30	NA	75466939	75404988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ENSMUST00000072235.10	chr1	-	646	9	FSM	ENSMUSG00000060715.10	ENSMUST00000072235.10	646	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	9.08209089362136	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAGAATGGAATTGCTT	NA	False	NA	NA	False	AATAAA	-28	NA	53226795	53197735	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_53197948_53202384_53202405_53209396_53209420_53209546_53209618_53216928_53216987_53221001_53221055_53221653_53221704_53224373_53224450_53226712
ENSMUST00000072289.12	chr11	+	2621	11	FSM	ENSMUSG00000061981.15	ENSMUST00000072289.12	2621	11	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_3	23.4778619128744	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	False	NA	21	True	AATAAA	-18	NA	77928756	77951260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_77928939_77940303_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ENSMUST00000072292.12	chrX	-	4045	20	FSM	ENSMUSG00000036916.14	ENSMUST00000072292.12	4045	20	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_17	15.8598431908636	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTGCATCATCTAATACG	NA	False	NA	44	True	AATAAA	-22	NA	47683329	47630501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47683240
ENSMUST00000072298.13	chr2	-	2586	16	FSM	ENSMUSG00000027634.15	ENSMUST00000072298.13	2586	16	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	17.2644786258439	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5914	False	NA	0	True	AATAAA	-22	NA	156833976	156769264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ENSMUST00000072376.13	chr18	+	3040	9	FSM	ENSMUSG00000060450.15	ENSMUST00000072376.13	3040	9	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	53.7248487666555	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACACGGTGTCCTGTTG	926	False	NA	23	True	AATAAA	-28	NA	38429687	38450902	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUST00000072383.14	chr17	+	2905	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	29.1082462542833	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	3	True	NA	NA	NA	66418539	66427498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ENSMUST00000072406.5	chr17	-	3255	14	FSM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	48.4489605166915	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAATTTTCTTCGTGTCT	NA	False	NA	-18	True	TATAAA	-38	NA	85397649	85370897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
ENSMUST00000072431.13	chr4	-	4059	9	FSM	ENSMUSG00000040928.16	ENSMUST00000072431.13	4059	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	67.6456761367643	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1151	False	NA	-5	True	AATAAA	-15	NA	129083372	129041797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076001_129076326_129077393_129077511_129083334
ENSMUST00000072465.9	chr9	+	1425	6	FSM	ENSMUSG00000057982.9	ENSMUST00000072465.9	1425	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	52.9694251431899	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTTGTGTTTTG	797	False	NA	14	True	NA	NA	NA	22137066	22154650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837_22150550_22154329
ENSMUST00000072503.13	chr7	+	679	6	FSM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	0	0	0	0	multi-exon	FALSE	canonical	3	6098	junction_1	973.20817916826	113711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGTGTTCATTCATGAA	5922	False	NA	16	True	AATAAA	-23	NA	45367494	45370259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
ENSMUST00000072530.11	chr14	+	2601	15	FSM	ENSMUSG00000022214.16	ENSMUST00000072530.11	2601	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	34.3960278912243	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGTGTCTGTGTCAC	NA	False	NA	11	True	AATAAA	-16	NA	55798385	55807519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55798433_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUST00000072554.13	chr4	+	2528	10	FSM	ENSMUSG00000059939.14	ENSMUST00000072554.13	2528	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	55.1321644374276	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8255	False	NA	22	True	NA	NA	NA	156194438	156211722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ENSMUST00000072566.5	chr11	-	734	4	FSM	ENSMUSG00000020857.12	ENSMUST00000072566.5	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	6715	junction_3	620.302256072706	15237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGCAGTGTTCAGTAC	NA	False	NA	-31	True	NA	NA	NA	93846609	93840642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320
ENSMUST00000072576.10	chr18	+	876	5	FSM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	0	0	0	0	multi-exon	FALSE	canonical	3	833	junction_3	511.998291012773	3995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGTAGCTTTCACTTAG	NA	False	NA	4	True	AATAAA	-14	NA	34464197	34469652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509_34467622_34469151
ENSMUST00000072581.9	chr11	+	1311	11	FSM	ENSMUSG00000023170.15	ENSMUST00000072581.9	1311	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	101.623816106265	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTACCCACCATCATG	3929	False	NA	-3	True	AATAAA	-7	NA	69804713	69807402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69804901_69805098_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ENSMUST00000072585.8	chr9	-	1920	12	FSM	ENSMUSG00000056131.14	ENSMUST00000072585.8	1920	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	140.019065998082	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTTTCGATTGCTTACC	NA	False	NA	-2	True	ATTAAA	-20	NA	86453881	86437053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_86437457_86438244_86438419_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ENSMUST00000072634.15	chr9	-	3634	17	FSM	ENSMUSG00000031996.18	ENSMUST00000072634.15	3634	17	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_10	199.562020434751	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8739	False	NA	-9	True	AATAAA	-19	NA	31123087	31060852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUST00000072662.12	chr7	+	1980	6	FSM	ENSMUSG00000058028.15	ENSMUST00000072662.12	1980	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.49799919935936	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATTGATTGACTTATT	3080	False	NA	NA	False	ATTAAA	-22	NA	6225276	6242422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_6225336_6227584_6227759_6233070_6233538_6234335_6234537_6236813_6236968_6241497
ENSMUST00000072697.13	chr3	-	2047	12	FSM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	0	0	0	0	multi-exon	TRUE	canonical	3	875	junction_11	59.2580851965116	3075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGACTCTCCAGG	NA	False	NA	-6	True	AATAAA	-16	NA	153650269	153627993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
ENSMUST00000072699.13	chrX	+	1571	5	FSM	ENSMUSG00000015217.12	ENSMUST00000072699.13	1571	5	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_1	126.240593708997	1800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCACCAGTCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	70599523	70604282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_70599615_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ENSMUST00000072725.12	chr7	-	776	4	FSM	ENSMUSG00000035642.17	ENSMUST00000072725.12	776	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	25.8069758011279	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAGAGCATTAGCGATCT	NA	False	NA	NA	False	AATAAA	-28	NA	97228686	97199540	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_97199949_97214357_97214508_97224794_97224899_97228572
ENSMUST00000072727.7	chr7	-	2285	16	FSM	ENSMUSG00000059119.10	ENSMUST00000072727.7	2285	16	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_2	192.287354411741	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTTTTTTTGTTGTTT	NA	False	NA	-1	True	ATTAAA	-20	NA	143102829	143067315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ENSMUST00000072751.13	chr10	+	1444	5	FSM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	0	0	0	0	multi-exon	FALSE	canonical	3	742	junction_3	32.2286751201473	1013	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTCCTGCTGTGTG	NA	False	NA	15	True	AATAAA	-19	NA	81220261	81224186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540
ENSMUST00000072838.6	chr15	+	2018	12	FSM	ENSMUSG00000022556.12	ENSMUST00000072838.6	2018	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_10	77.0148638653497	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATACATATA	7144	False	NA	12	True	NA	NA	NA	76361644	76385172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384466_76384537_76384616
ENSMUST00000072847.12	chr18	+	3002	7	FSM	ENSMUSG00000024317.16	ENSMUST00000072847.12	3002	7	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	148.868416917611	1602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTGTGTCTTAATTAAA	NA	False	NA	2	True	ATTAAA	-14	NA	21134397	21161280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
ENSMUST00000072896.13	chr5	+	2221	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_5	40.0679422980517	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCAATTTGTTTTAT	NA	False	NA	6	True	AGTAAA	-26	NA	21850876	21867692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
ENSMUST00000072916.5	chr11	-	732	5	FSM	ENSMUSG00000014243.6	ENSMUST00000072916.5	732	5	0	0	0	0	multi-exon	TRUE	canonical	3	218	junction_4	57.8986182909402	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATCAAGTTATTGAAGT	NA	False	NA	-15	True	AATAAA	-25	NA	62172201	62158049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_62158433_62159529_62159635_62164537_62164641_62167443_62167466_62172082
ENSMUST00000072933.13	chr6	-	1272	12	FSM	ENSMUSG00000059900.15	ENSMUST00000072933.13	1272	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	22.1650458199018	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTCGACTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	115735960	115706101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115715908_115715984_115718501_115718634_115719270_115719349_115735898
ENSMUST00000072961.6	chr13	+	3199	29	FSM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_25	60.5186237990473	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATTGTGTTGCAAGC	NA	False	NA	23	True	AATAAA	-22	NA	18901459	19050981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ENSMUST00000072965.5	chr7	+	1843	16	FSM	ENSMUSG00000015149.15	ENSMUST00000072965.5	1843	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	28.236776649532	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGACTTGTGTGGCCTCT	NA	False	NA	12	True	ATTAAA	-21	NA	28466191	28488085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28466293_28467056_28467104_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341
ENSMUST00000073025.12	chr1	+	1706	8	FSM	ENSMUSG00000026150.15	ENSMUST00000073025.12	1706	8	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_5	154.121870675152	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAATGTCTATGGAAAG	NA	False	NA	10	True	AATAAA	-10	NA	82702639	82730108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713136_82713229_82724803_82724864_82728240_82728326_82729305
ENSMUST00000073067.11	chrX	-	1910	2	FSM	ENSMUSG00000032806.14	ENSMUST00000073067.11	1910	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCTCGGGTCCCTTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	73416911	73412822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_73414618_73416796
ENSMUST00000073104.11	chr17	+	3850	20	FSM	ENSMUSG00000061950.18	ENSMUST00000073104.11	3850	20	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	67.7698974676079	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGAGAAAGGCGTTTGT	NA	False	NA	35	True	AATAAA	-32	NA	66090349	66148921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ENSMUST00000073120.11	chr1	-	1821	13	FSM	ENSMUSG00000062729.13	ENSMUST00000073120.11	1821	13	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_8	32.2076595444831	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5189	False	NA	-15	True	AGTAAA	-16	NA	171108760	171104564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
ENSMUST00000073127.14	chr9	+	5499	36	FSM	ENSMUSG00000035024.17	ENSMUST00000073127.14	5499	36	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	46.2265053396681	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCTAGCATTTATTATA	NA	False	NA	NA	False	AATAAA	-15	NA	26941470	27006607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_26941796_26941918_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ENSMUST00000073128.7	chr11	+	2977	7	FSM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	22.1716786313832	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTTACTGTCTGTTAA	469	False	NA	16	True	AATAAA	-17	NA	58221575	58238551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_58221619_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ENSMUST00000073157.15	chr13	-	3957	4	FSM	ENSMUSG00000071281.13	ENSMUST00000073157.15	3957	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	15.2970585407784	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGTTATTTTATTTAT	NA	False	NA	-1	True	NA	NA	NA	67877292	67853427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67877179
ENSMUST00000073228.12	chr2	+	2669	5	FSM	ENSMUSG00000027463.15	ENSMUST00000073228.12	2669	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	24.8294180358703	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGACTTGTGTGCTCAC	NA	False	NA	18	True	NA	NA	NA	151838454	151851178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151838572_151845971_151846599_151847451_151847940_151849400_151849525_151849865
ENSMUST00000073312.7	chr17	+	4209	6	FSM	ENSMUSG00000067928.7	ENSMUST00000073312.7	4209	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	11.689311356962	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGGAAATTCAATGAG	NA	False	NA	9	True	AATAAA	-24	NA	21926722	21944617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938104_21939924_21940052_21940968
ENSMUST00000073339.7	chrX	+	1857	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	42	3309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGAGGCTTTCATTTT	1668	False	NA	NA	False	AATAAA	-15	NA	35861858	35869732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_35862268_35865773_35865930_35868440
ENSMUST00000073352.10	chr2	+	2690	4	FSM	ENSMUSG00000062175.14	ENSMUST00000073352.10	2690	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	80.1373820385967	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156682019	156697490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_156682159_156686075_156686302_156695048_156695149_156695265
ENSMUST00000073388.13	chr11	+	2327	11	FSM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	8.17312669668102	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTTTCTGTTTGTTT	NA	False	NA	15	True	NA	NA	NA	117716749	117730734	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_117716833_117718904_117718996_117723170_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
ENSMUST00000073410.12	chr7	-	1430	4	FSM	ENSMUSG00000090744.8	ENSMUST00000073410.12	1430	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	48.9285192909003	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATCACTGTGGTGAAG	NA	False	NA	NA	False	NA	NA	NA	41210253	41195097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_41196224_41197139_41197201_41197407_41197535_41210137
ENSMUST00000073428.7	chr15	-	2063	11	FSM	ENSMUSG00000063354.8	ENSMUST00000073428.7	2063	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	124.203099800287	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACTGTCTTCTTGTAGA	8666	False	NA	-2	True	AATAAA	-21	NA	76501048	76496582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
ENSMUST00000073430.14	chr19	+	2112	10	FSM	ENSMUSG00000010110.18	ENSMUST00000073430.14	2112	10	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_5	5.51764845241562	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	6939	False	NA	12	True	NA	NA	NA	8719166	8733006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ENSMUST00000073448.12	chr9	-	2987	19	FSM	ENSMUSG00000057969.16	ENSMUST00000073448.12	2987	19	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_18	15.19584088647	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGGAATGGCCCCAGCA	6904	False	NA	-23	True	AATAAA	-15	NA	107483855	107475552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107483754
ENSMUST00000073456.9	chr13	-	2700	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	5602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTGGTCTAACAGT	NA	False	NA	NA	False	AATAAA	-14	NA	97274445	97265931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
ENSMUST00000073471.13	chr11	-	526	4	Antisense	novelGene_ENSMUSG00000060938.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	200631	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGACTTCCGGTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	68795360	68792408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr11_-_68792451_68793095_68793269_68794004_68794146_68795190
ENSMUST00000073488.12	chr7	-	1999	10	FSM	ENSMUSG00000060601.14	ENSMUST00000073488.12	1999	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	207.457626195488	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	False	NA	0	True	AATAAA	-31	NA	44203373	44199039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202179_44203002_44203133_44203232
ENSMUST00000073570.12	chr17	+	1197	6	FSM	ENSMUSG00000073423.11	ENSMUST00000073570.12	1197	6	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	31.6569107779012	1119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGAGTGCTCTTCTCCG	4917	False	NA	92	True	NA	NA	NA	33848063	33850753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ENSMUST00000073600.9	chr4	+	3036	4	FSM	ENSMUSG00000028967.11	ENSMUST00000073600.9	3036	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	142.835569799683	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTTGTCTAAACTCTT	2627	False	NA	NA	False	AATAAA	-33	NA	150938375	150953349	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_150938563_150949531_150949727_150949820_150949898_150950772
ENSMUST00000073660.7	chr11	+	2568	11	FSM	ENSMUSG00000061981.15	ENSMUST00000073660.7	2568	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	151.687969199934	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	False	NA	21	True	AATAAA	-18	NA	77928809	77951260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_77928939_77940303_77940386_77944188_77944280_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ENSMUST00000073691.5	chr15	-	4243	11	FSM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_4	128.449367456597	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7238	False	NA	-3	True	AATAAA	-15	NA	99773337	99676350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ENSMUST00000073764.13	chr4	+	767	3	FSM	ENSMUSG00000048351.15	ENSMUST00000073764.13	767	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	216	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGAGTGGCTAGAGTGT	NA	False	NA	-11	True	NA	NA	NA	108185352	108195880	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_108185418_108189407_108189549_108195319
ENSMUST00000073787.7	chr4	+	1288	7	FSM	ENSMUSG00000028743.8	ENSMUST00000073787.7	1288	7	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_5	35.9787746070127	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGTCTCCTCTGCTGCCC	NA	False	NA	29	True	AATAAA	-40	NA	139038054	139045737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_139038388_139041414_139041603_139041777_139041883_139044020_139044118_139044244_139044345_139044880_139045011_139045402
ENSMUST00000073791.10	chr11	-	659	6	FSM	ENSMUSG00000034566.11	ENSMUST00000073791.10	659	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	1301.70156333931	11048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115310788	115306514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309377_115310717
ENSMUST00000073868.9	chr10	+	885	8	FSM	ENSMUSG00000061315.15	ENSMUST00000073868.9	885	8	0	0	0	0	multi-exon	FALSE	canonical	3	9741	junction_1	845.476607528293	90649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCAGGTGCTAGATCTT	4912	False	NA	0	True	AATAAA	-24	NA	127871443	127884502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ENSMUST00000073926.8	chr10	-	490	7	FSM	ENSMUSG00000061983.8	ENSMUST00000073926.8	490	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1773.5106192709	159404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGATTTTTCTCTTG	NA	False	NA	-25	True	AATAAA	-6	NA	23663086	23661102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662522_23662538_23662661_23662779_23662891_23662943_23663053
ENSMUST00000073927.5	chrX	-	2232	12	FSM	ENSMUSG00000031297.15	ENSMUST00000073927.5	2232	12	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_11	82.5987012884915	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128978	100122827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ENSMUST00000074038.7	chr12	-	2754	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	5441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTGGGATTTTAATTG	NA	False	NA	NA	False	ATTAAA	-23	NA	30961588	30943654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
ENSMUST00000074043.7	chr15	-	3044	4	FSM	ENSMUSG00000037465.11	ENSMUST00000074043.7	3044	4	0	0	0	0	multi-exon	FALSE	canonical	3	2013	junction_1	150.900261394369	2591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGTCTGTTGTATG	NA	False	NA	-7	True	AATAAA	-18	NA	38300950	38294656	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_38296409_38296858_38297772_38297865_38298097_38300802
ENSMUST00000074046.13	chr2	-	3502	22	FSM	ENSMUSG00000017670.17	ENSMUST00000074046.13	3502	22	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_12	97.9880829442692	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	-17	True	AATAAA	-15	NA	165168399	165131074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165145585_165145622_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ENSMUST00000074072.5	chr13	-	561	1	FSM	ENSMUSG00000069117.5	ENSMUST00000074072.5	561	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	122205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCAATCAGATTCGAGA	NA	False	NA	NA	False	AATAAA	-33	NA	97897140	97896579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_97896600_97897100
ENSMUST00000074082.13	chr9	-	2129	11	FSM	ENSMUSG00000032786.17	ENSMUST00000074082.13	2129	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	54.5879107495423	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAGTCCTGGTTAGTGTG	8576	False	NA	-14	True	AATAAA	-31	NA	106125055	106111125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115436_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
ENSMUST00000074085.12	chrX	+	855	6	FSM	ENSMUSG00000008682.14	ENSMUST00000074085.12	855	6	0	0	0	0	multi-exon	FALSE	canonical	3	7516	junction_1	832.521615335001	202729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314465	73316741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ENSMUST00000074113.13	chr5	-	3966	28	FSM	ENSMUSG00000029086.16	ENSMUST00000074113.13	3966	28	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_24	9.32068513939636	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTTTGGTCCTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	44259296	44150961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44215967_44215995_44220467_44220527_44251736_44252111_44258989
ENSMUST00000074156.7	chr2	+	1567	13	FSM	ENSMUSG00000026807.9	ENSMUST00000074156.7	1567	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.54405625374562	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAGCCTTCTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	28590175	28703177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_28590287_28592700_28592786_28599938_28599989_28602286_28602401_28606428_28606498_28623818_28623901_28624385_28624458_28625514_28625716_28629544_28629677_28632671_28632762_28649953_28650096_28699671_28699753_28702839
ENSMUST00000074204.12	chr10	+	3607	13	FSM	ENSMUSG00000019894.15	ENSMUST00000074204.12	3607	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.765633260354	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCGTGTCCCTCATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	103203703	103255238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_103204015_103205232_103205330_103224887_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUST00000074246.7	chr9	-	3130	7	FSM	ENSMUSG00000057367.13	ENSMUST00000074246.7	3130	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	23.4781222039204	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGTTTCTGATGTGA	1782	False	NA	-10	True	AATAAA	-12	NA	7835256	7818236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505
ENSMUST00000074259.15	chr17	+	1466	4	FSM	ENSMUSG00000059791.15	ENSMUST00000074259.15	1466	4	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	13.2748718344933	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTGTCTGTCCATGAC	4589	False	NA	24	True	AATAAA	-18	NA	36172209	36176294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_36172410_36174330_36174528_36175003_36175181_36175402
ENSMUST00000074267.5	chr12	-	954	7	FSM	ENSMUSG00000061477.5	ENSMUST00000074267.5	954	7	0	0	0	0	multi-exon	TRUE	canonical	3	10789	junction_4	2567.89392736971	192930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTATGTCCTATTCTG	NA	False	NA	-7	True	NA	NA	NA	28685952	28680852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854
ENSMUST00000074339.13	chr3	-	2313	17	FSM	ENSMUSG00000028107.15	ENSMUST00000074339.13	2313	17	0	0	0	0	multi-exon	FALSE	canonical	1	55	junction_5	130.985194177625	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662174	95647287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ENSMUST00000074352.11	chr18	-	3956	28	FSM	ENSMUSG00000044252.19	ENSMUST00000074352.11	3956	28	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_13	124.793898676083	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTCAGTTGATATTGT	NA	False	NA	-8	True	AATAAA	-39	NA	13074898	12888370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ENSMUST00000074455.9	chr7	-	2777	5	FSM	ENSMUSG00000066838.8	ENSMUST00000074455.9	2777	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	7.29725975966321	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCATGACTATTGTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	7212997	7205115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7212716
ENSMUST00000074519.13	chr3	+	2827	8	FSM	ENSMUSG00000038393.15	ENSMUST00000074519.13	2827	8	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	78.2390371795021	2474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGATACTGGAGAAGTTAC	NA	False	NA	45	True	AATAAA	-40	NA	96465272	96469199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96465802_96466204_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ENSMUST00000074525.10	chr1	+	3138	11	FSM	ENSMUSG00000056870.10	ENSMUST00000074525.10	3138	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	3.104834939252	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGATATGCTCACTTA	NA	False	NA	NA	False	AATAAA	-20	NA	44590670	44835998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_44591033_44728303_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173_44805312_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ENSMUST00000074552.12	chr15	+	3299	20	FSM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	0	0	0	0	multi-exon	FALSE	canonical	1	369	junction_14	161.21684095061	2377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTTGATCCTCTGGCT	NA	False	NA	6	True	AATAAA	-16	NA	89239938	89257029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUST00000074556.7	chr6	+	1831	1	FSM	ENSMUSG00000060032.7	ENSMUST00000074556.7	1831	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3398	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGACAGTGTTTGATT	NA	False	NA	NA	False	AATAAA	-19	NA	136785241	136787072	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_136785200_136787100
ENSMUST00000074574.13	chr17	+	2838	9	FSM	ENSMUSG00000043592.16	ENSMUST00000074574.13	2838	9	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_1	7.66383552798467	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTACTTTTGAATGGT	NA	False	NA	NA	False	AATAAA	-26	NA	48761928	48775714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_48762001_48766566_48767013_48767512_48767814_48769203_48769467_48770389_48770492_48770604_48770673_48771469_48771571_48771943_48772058_48774343
ENSMUST00000074575.11	chr7	-	1735	10	FSM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	0	0	0	0	multi-exon	FALSE	canonical	3	1192	junction_9	143.840189098875	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGATGTCTTACTGCACT	9041	False	NA	0	True	AATAAA	-25	NA	45045166	45025876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ENSMUST00000074582.7	chr3	-	2799	21	FSM	ENSMUSG00000028041.18	ENSMUST00000074582.7	2799	21	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	31.553882486946	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTCTGCTCCTGGA	NA	False	NA	-19	True	AATAAA	-12	NA	89257282	89246954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89247261_89247361_89247487_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ENSMUST00000074616.7	chr13	-	3934	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	9992	False	NA	3	True	AATAAA	-21	NA	103911116	103878119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ENSMUST00000074619.6	chrX	-	1645	9	FSM	ENSMUSG00000057836.13	ENSMUST00000074619.6	1645	9	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_7	340.598531081683	2230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-7	True	AATAAA	-16	NA	72140701	72129900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
ENSMUST00000074628.13	chr11	-	1826	8	FSM	ENSMUSG00000034341.18	ENSMUST00000074628.13	1826	8	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_1	94.6975852546475	3305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTCTGACTCTTGTGTG	NA	False	NA	-11	True	AGTAAA	-16	NA	115977821	115969398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ENSMUST00000074667.9	chr17	+	2046	8	FSM	ENSMUSG00000062327.11	ENSMUST00000074667.9	2046	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	7.70634511957782	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTGGATTATTCTCTA	NA	False	NA	10	True	AATAAA	-20	NA	8653254	8661328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_8653569_8654022_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657447_8657622_8658741_8658872_8660424
ENSMUST00000074680.8	chr13	+	795	1	FSM	ENSMUSG00000059751.8	ENSMUST00000074680.8	795	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7274	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAGATTTTTAATAGTG	NA	False	NA	NA	False	NA	NA	NA	108807136	108807931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_108807100_108807900
ENSMUST00000074733.11	chr5	+	5028	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGCCCGTTTGTG	NA	False	NA	12	True	AATATA	-17	NA	93241295	93322817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ENSMUST00000074792.7	chr9	+	2042	9	FSM	ENSMUSG00000059183.13	ENSMUST00000074792.7	2042	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	22.1472345903501	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGGCCTGCCCAGGG	NA	False	NA	NA	False	NA	NA	NA	65343063	65360336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65347731_65348894_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
ENSMUST00000074846.14	chr5	-	3240	17	FSM	ENSMUSG00000029657.16	ENSMUST00000074846.14	3240	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	344.38590613402	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559674	149540309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ENSMUST00000074849.13	chr5	+	2669	15	FSM	ENSMUSG00000037313.17	ENSMUST00000074849.13	2669	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	250.331341649912	1836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGTCCTGTTGTTTA	NA	False	NA	35	True	ACTAAA	-23	NA	33815471	33829545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824386_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ENSMUST00000074856.13	chr8	+	4451	20	FSM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	14.3717944757881	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	9628	False	NA	17	True	ATTAAA	-27	NA	11808353	11885219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ENSMUST00000074876.13	chr7	+	2537	4	FSM	ENSMUSG00000058402.15	ENSMUST00000074876.13	2537	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	4.02768199119819	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGCTGCTATTTTCATT	NA	False	NA	NA	False	CATAAA	-1	NA	29559403	29575930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_29559519_29560440_29560494_29572316_29572359_29573603
ENSMUST00000074912.8	chr19	+	2176	5	FSM	ENSMUSG00000062376.8	ENSMUST00000074912.8	2176	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	5.33853912601566	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTAGACCAATCATTT	9071	False	NA	NA	False	AATAAA	-18	NA	46678344	46691821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_46678525_46687994_46688058_46688176_46688221_46689213_46689235_46689953
ENSMUST00000074919.11	chr18	+	3070	14	FSM	ENSMUSG00000024283.16	ENSMUST00000074919.11	3070	14	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_1	117.532571338518	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACACATTTTGTTAC	7	True	NA	NA	False	AATAAA	-8	NA	7868849	7927067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ENSMUST00000074941.8	chr18	+	3040	3	FSM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	18.5	517	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTTCTTACTGGGACA	1059	False	NA	NA	False	AATAAA	-26	NA	24122688	24138433	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_24122789_24123234_24123448_24135706
ENSMUST00000074950.11	chrX	+	2426	3	FSM	ENSMUSG00000045427.14	ENSMUST00000074950.11	2426	3	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_2	148.5	1605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCTTGCATAGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	133501927	133507803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133502083_133503440_133503512_133505603
ENSMUST00000075017.5	chr16	-	766	2	FSM	ENSMUSG00000059305.13	ENSMUST00000075017.5	766	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGGTCTGGCTGGTTTG	NA	False	NA	-1	True	ATTAAA	-14	NA	16687119	16686266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16686843_16686929
ENSMUST00000075044.10	chr2	-	2534	3	FSM	ENSMUSG00000027547.18	ENSMUST00000075044.10	2534	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	322.5	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGGCTTGTGTGTATGCT	NA	False	NA	-17	True	AATAAA	-22	NA	168608949	168590251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_168592381_168594373_168594661_168608831
ENSMUST00000075068.14	chr7	+	1881	15	FSM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	31.3925930429327	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCCCATCTTCCTC	NA	False	NA	14	True	AATAAA	-19	NA	34611803	34744133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_34611880_34620753_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34668929_34669006_34671081_34671129_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
ENSMUST00000075162.5	chr7	+	954	5	FSM	ENSMUSG00000063903.6	ENSMUST00000075162.5	954	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	17.0934929139717	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAAGTTCTGACATTCTC	NA	False	NA	7	True	AATAAA	-21	NA	43874783	43879042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43874949_43876944_43877105_43877951_43878239_43878334_43878472_43878837
ENSMUST00000075175.12	chr8	-	671	5	FSM	ENSMUSG00000058833.12	ENSMUST00000075175.12	671	5	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_4	53.0518614188041	2305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70959402	70956944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70957160_70957633_70957711_70958405_70958611_70959146_70959230_70959311
ENSMUST00000075253.13	chr17	-	1752	13	FSM	ENSMUSG00000024055.16	ENSMUST00000075253.13	1752	13	0	0	0	0	multi-exon	FALSE	canonical	2	129	junction_12	13.5285192587117	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGCATCAGACCAAAAT	NA	False	NA	-7	True	AATAAA	-29	NA	33166376	33143661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33143929_33144297_33144381_33144510_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151386_33151515_33151602_33151657_33160029_33160175_33165778_33165978_33166286
ENSMUST00000075255.6	chr13	-	3238	4	FSM	ENSMUSG00000069206.15	ENSMUST00000075255.6	3238	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	29.1699998095456	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTGGTGTCTGCTTGGT	9938	False	NA	4	True	NA	NA	NA	67599743	67588551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67591454_67596939_67597036_67597468_67597596_67599630
ENSMUST00000075280.12	chr19	-	1018	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	0	0	0	0	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	2365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACTGGAAAAAATTCTTT	NA	False	NA	-33	True	TATAAA	-22	NA	41921735	41912004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ENSMUST00000075299.13	chr18	-	3656	12	FSM	ENSMUSG00000033871.15	ENSMUST00000075299.13	3656	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	7.10022697809696	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGCTCTGATTACTGT	3293	False	NA	NA	False	AAAAAG	-37	NA	61533502	61431206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277_61441086_61442103_61442166_61442716_61442754_61443477_61444580_61445224_61445342_61448807_61449021_61456205_61456380_61533360
ENSMUST00000075303.7	chr6	-	1928	8	FSM	ENSMUSG00000058979.8	ENSMUST00000075303.7	1928	8	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	16.3245151817249	445	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTTGTGAGGATT	NA	False	NA	35	True	ATTAAA	-21	NA	120508280	120486454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
ENSMUST00000075363.10	chr4	+	1457	9	FSM	ENSMUSG00000028937.15	ENSMUST00000075363.10	1457	9	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_1	55.2466062306093	2516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCTAGGTGGTCATTT	NA	False	NA	17	True	AATAAA	-22	NA	152262590	152356309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ENSMUST00000075418.15	chr7	+	2483	6	FSM	ENSMUSG00000046027.18	ENSMUST00000075418.15	2483	6	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_5	19.4566184112245	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGAGTTCCTCATTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	83281166	83291536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
ENSMUST00000075447.14	chr7	-	2735	9	FSM	ENSMUSG00000062300.15	ENSMUST00000075447.14	2735	9	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_4	306.654528745297	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGAAGTGAGTGGGGT	NA	False	NA	-2	True	GATAAA	-18	NA	19483498	19450568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ENSMUST00000075451.12	chr1	-	1651	10	FSM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_9	54.0893179933677	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGTGGTTCATACTT	NA	False	NA	-1	True	AATAAA	-19	NA	194813869	194786097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
ENSMUST00000075453.9	chr5	+	899	6	FSM	ENSMUSG00000041453.13	ENSMUST00000075453.9	899	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	5104.64844626934	17382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTTTTCCTTA	NA	False	NA	1	True	AATAAA	-15	NA	146770004	146772795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_146770377_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUST00000075491.14	chr8	+	1698	9	FSM	ENSMUSG00000019428.17	ENSMUST00000075491.14	1698	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	448.998590615828	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTTCTAGGCCTCTT	NA	False	NA	25	True	AATAAA	-17	NA	70980396	70987976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ENSMUST00000075550.4	chr13	-	1251	9	FSM	ENSMUSG00000045273.9	ENSMUST00000075550.4	1251	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_6	26.2865816530031	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGACTGGAGAGATG	NA	False	NA	1	True	AATAAA	-41	NA	100912407	100896181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
ENSMUST00000075610.13	chr7	+	1135	6	FSM	ENSMUSG00000063179.14	ENSMUST00000075610.13	1135	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	32.2713495224479	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGATTTGGATAAATTT	NA	False	NA	22	True	ATTAAA	-22	NA	130972869	130989568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_130973119_130975264_130975560_130975793_130975993_130985653_130985730_130986228_130986323_130989346
ENSMUST00000075630.10	chr15	-	441	4	FSM	ENSMUSG00000062683.12	ENSMUST00000075630.10	441	4	0	0	0	0	multi-exon	FALSE	canonical	3	4680	junction_1	53.4935094712953	32927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTGTCTCCACTTCCA	7279	False	NA	NA	False	GGGGCT	-44	NA	102576184	102571448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145
ENSMUST00000075641.10	chr11	-	1633	11	FSM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	0	0	0	0	multi-exon	FALSE	canonical	3	16927	junction_8	1838.26714326292	139932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTCAGTGGATAGT	NA	False	NA	NA	False	AATACA	-9	NA	33113206	33102286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUST00000075654.2	chrX	+	525	2	FSM	ENSMUSG00000059690.2	ENSMUST00000075654.2	525	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTGTCTCTGTGTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	68988905	68989584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_68989057_68989210
ENSMUST00000075671.5	chr7	-	3388	8	FSM	ENSMUSG00000030722.8	ENSMUST00000075671.5	3388	8	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_7	21.1920277655614	591	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGGTTTCTGTCTTT	NA	False	NA	-6	True	AATAAA	-20	NA	125995909	125982025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
ENSMUST00000075693.12	chr4	+	1321	10	FSM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_9	32.5261528202145	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTCCTTCAGCTCT	NA	False	NA	28	True	AGTAAA	-18	NA	107171559	107217019	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ENSMUST00000075738.6	chr7	-	618	4	FSM	ENSMUSG00000036751.8	ENSMUST00000075738.6	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	5624	junction_1	329.368419183679	32586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATTATTGTGTGTGTG	NA	False	NA	NA	False	AATGAA	-20	NA	30325576	30316285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30316588_30322839_30322941_30323924_30324039_30325475
ENSMUST00000075774.5	chr13	-	2182	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	8083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTACACACGCTCAGCAA	NA	False	NA	NA	False	NA	NA	NA	34314337	34310730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
ENSMUST00000075775.6	chr4	+	3993	5	FSM	ENSMUSG00000067919.9	ENSMUST00000075775.6	3993	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	279.904894562421	4827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	2283	False	NA	NA	False	AATAAA	-19	NA	147106306	147145251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_147106458_147107818_147107913_147136962_147137048_147140055_147140183_147141715
ENSMUST00000075829.3	chr10	-	666	6	FSM	ENSMUSG00000062981.6	ENSMUST00000075829.3	666	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	1622.28826045188	10128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	False	NA	-9	True	AATAAA	-16	NA	95337789	95316667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337751
ENSMUST00000075843.13	chr8	-	3000	20	FSM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_16	54.4176930653952	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACGTTTGCTGGTGAGA	NA	False	NA	-9	True	ATTAAA	-21	NA	84467798	84449990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84458531_84458667_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ENSMUST00000075853.6	chr13	+	692	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	3514	junction_2	7.5	21721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTGTTGAAATTAATTTG	NA	False	NA	NA	False	AATAAA	-24	NA	51799267	51804696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_51799508_51803620_51803749_51804372
ENSMUST00000075895.9	chr1	+	1917	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGTTATTTTTCATC	NA	False	NA	24	True	AATAAA	-14	NA	171954321	171962850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ENSMUST00000075896.7	chr8	+	2391	6	FSM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_1	21.35790251874	438	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCCTCTGGTTAAGCTT	5194	False	NA	9	True	AATAAA	-14	NA	125739735	125760931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235
ENSMUST00000075954.9	chr12	+	2209	15	FSM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_4	28.2355254592363	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACCTGGAAACTTGCAT	NA	False	NA	12	True	ATTAAA	-21	NA	24548357	24608538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_24548649_24550434_24550534_24554945_24555034_24559082_24559181_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
ENSMUST00000075980.12	chr11	+	779	5	FSM	ENSMUSG00000020895.15	ENSMUST00000075980.12	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_4	23.6893963620857	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCGTATACTATTTTT	4647	False	NA	NA	False	AATAAA	-19	NA	68961631	68963856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963346_68963571
ENSMUST00000076022.7	chr4	+	2682	24	FSM	ENSMUSG00000017264.17	ENSMUST00000076022.7	2682	24	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_18	124.035058157659	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148642918	148666858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ENSMUST00000076051.12	chr5	+	2661	14	FSM	ENSMUSG00000032754.15	ENSMUST00000076051.12	2661	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	64.1450833343938	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTACCAGAAGAGTCCCACA	80	False	NA	2	True	AATAAA	-18	NA	120649316	120672085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120670924
ENSMUST00000076052.8	chr7	+	2967	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	10.1665812837945	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATTTATATTAATTTATA	NA	False	NA	NA	False	NA	NA	NA	92524459	92583791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ENSMUST00000076070.9	chr15	-	877	8	FSM	ENSMUSG00000022635.10	ENSMUST00000076070.9	877	8	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_1	44.8289265214016	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGGAATAGTGACTGGT	NA	False	NA	-7	True	AATAAA	-21	NA	93296215	93283986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
ENSMUST00000076084.6	chr2	-	787	4	FSM	ENSMUSG00000027317.9	ENSMUST00000076084.6	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	4.96655480858378	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGAGTGTGGTGTGTAT	NA	False	NA	NA	False	GATAAA	-18	NA	119060387	119048599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_119048905_119049106_119049140_119049244_119049329_119060022
ENSMUST00000076095.14	chr5	-	2060	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGATGCATCCCGTGG	NA	False	NA	-19	True	ACTAAA	-32	NA	138980792	138961768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
ENSMUST00000076123.12	chr13	-	2391	4	FSM	ENSMUSG00000071291.11	ENSMUST00000076123.12	2391	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	4.08248290463863	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCTTTGGTCATGCCA	NA	False	NA	-1	True	NA	NA	NA	67648674	67638286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67648489
ENSMUST00000076155.6	chr18	+	1791	2	FSM	ENSMUSG00000059040.6	ENSMUST00000076155.6	1791	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	23036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAACAGACATAGCTG	NA	False	NA	NA	False	NA	NA	NA	48178401	48181479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_48178513_48179799
ENSMUST00000076219.6	chr19	-	3471	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	0	0	0	0	multi-exon	TRUE	canonical	3	1256	junction_17	93.320929312512	2523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTTGTTTGTTTGTTTG	NA	False	NA	0	True	NA	NA	NA	27407225	27366097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ENSMUST00000076264.8	chr5	+	3299	14	FSM	ENSMUSG00000062761.8	ENSMUST00000076264.8	3299	14	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	41.4283440690995	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7146	False	NA	16	True	AATAAA	-17	NA	31609778	31639098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ENSMUST00000076265.13	chrX	-	2344	10	FSM	ENSMUSG00000036572.17	ENSMUST00000076265.13	2344	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	69.0213779729436	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	False	NA	-1	True	AATAAA	-24	NA	36373975	36355330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_36356315_36359174_36359476_36360510_36360672_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ENSMUST00000076352.8	chr13	-	1918	7	FSM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	10.85382677011	558	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGCAATCCAATAAATTG	4869	False	NA	NA	False	AATAAA	-25	NA	33035168	33026074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_33027206_33029291_33029460_33029653_33029797_33031372_33031491_33032601_33032740_33034221_33034398_33035124
ENSMUST00000076354.13	chrX	+	1733	8	FSM	ENSMUSG00000058254.13	ENSMUST00000076354.13	1733	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	9.20736173961258	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGTGGTTTTCTTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	10351396	10462844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_10351478_10445553_10445743_10448403_10448479_10450280_10450377_10451735_10451892_10456374_10456459_10461517_10461594_10461868
ENSMUST00000076362.12	chr1	+	3394	7	FSM	ENSMUSG00000026254.18	ENSMUST00000076362.12	3394	7	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_6	847.519796556727	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGAGTCTCCTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	87141635	87168210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
ENSMUST00000076431.13	chr2	+	3135	13	FSM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	0	0	0	0	multi-exon	FALSE	canonical	3	1351	junction_8	105.114619979018	2448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGATGCCCCTAGGTGT	644	False	NA	19	True	AATAAA	-16	NA	26279350	26287134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ENSMUST00000076451.7	chr19	-	685	6	FSM	ENSMUSG00000058216.14	ENSMUST00000076451.7	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	23.4469614236046	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTGCAGGGCTTGTCC	9224	False	NA	NA	False	NA	NA	NA	4109295	4107477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4107719_4107887_4107996_4108085_4108190_4108528_4108617_4108734_4108842_4109258
ENSMUST00000076532.14	chr13	-	1504	8	FSM	ENSMUSG00000060147.16	ENSMUST00000076532.14	1504	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	178.591998815222	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGTCTGCCTCACTGG	NA	False	NA	2	True	AATAAA	-28	NA	34186777	34101900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34180225_34180335_34186652
ENSMUST00000076635.13	chrX	-	4355	19	FSM	ENSMUSG00000036916.14	ENSMUST00000076635.13	4355	19	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_17	17.6264391759848	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTGCATCATCTAATACG	NA	False	NA	44	True	AATAAA	-22	NA	47681010	47630501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667434_47677579_47677627_47680549
ENSMUST00000076639.11	chr3	-	1842	5	FSM	ENSMUSG00000001017.16	ENSMUST00000076639.11	1842	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	581.611769138143	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGCTTTCTGTTTAT	NA	False	NA	-3	True	NA	NA	NA	90416769	90406264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90407415_90410402_90410587_90413414_90413569_90414851_90414934_90416497
ENSMUST00000076813.8	chr12	+	1141	6	FSM	ENSMUSG00000062054.8	ENSMUST00000076813.8	1141	6	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_4	39.1131691377725	2211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCACAATTTTATAAAAATG	NA	False	NA	NA	False	AATACA	-25	NA	21366389	21373820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770_21369933_21371334_21371457_21373289
ENSMUST00000076842.7	chr18	-	879	1	FSM	ENSMUSG00000091957.4	ENSMUST00000076842.7	879	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25005	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGTTTTTATATGAGAA	7434	False	NA	NA	False	NA	NA	NA	61393032	61392153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_61392200_61393000
ENSMUST00000076891.7	chr19	-	2263	11	FSM	ENSMUSG00000024982.11	ENSMUST00000076891.7	2263	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	157.939355450122	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATAGTTTTCACCA	7441	False	NA	-26	True	AATAAA	-19	NA	55304462	55286751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304111
ENSMUST00000076941.12	chr3	-	4541	23	FSM	ENSMUSG00000033222.17	ENSMUST00000076941.12	4541	23	0	0	0	0	multi-exon	TRUE	canonical	3	226	junction_14	22.0712594988997	324	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGATGCTGTGTGTT	NA	False	NA	-7	True	AATAAA	-17	NA	100876979	100846175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ENSMUST00000076961.9	chr7	-	899	5	FSM	ENSMUSG00000003380.12	ENSMUST00000076961.9	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	706	junction_2	24.5051015096857	2320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTCCTGGTATTTTC	4495	False	NA	-5	True	AATAAA	-24	NA	24672179	24669176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_24669435_24669511_24669614_24671185_24671284_24671526_24671740_24671951
ENSMUST00000077037.13	chr15	+	2952	15	FSM	ENSMUSG00000056851.15	ENSMUST00000077037.13	2952	15	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	143.98145076108	1825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAATAAGAGTGTCTTT	2020	False	NA	NA	False	NA	NA	NA	102378984	102408496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUST00000077078.12	chr11	-	2787	7	FSM	ENSMUSG00000020448.17	ENSMUST00000077078.12	2787	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	17.6391294821737	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGAGTGTGGAGCTTGTG	6815	False	NA	-5	True	ATTAAA	-14	NA	3402363	3365981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3382399_3382621_3402208
ENSMUST00000077088.11	chr6	-	2577	12	FSM	ENSMUSG00000030254.17	ENSMUST00000077088.11	2577	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	49.718048005937	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCCTTTGTTTGGCAA	NA	False	NA	16	True	CATAAA	-40	NA	112673647	112596810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_112597866_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ENSMUST00000077128.13	chr18	-	4431	18	FSM	ENSMUSG00000041225.17	ENSMUST00000077128.13	4431	18	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_11	36.3783463484115	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAAAAATTCTAAACCAG	40	True	NA	NA	False	NA	NA	NA	6135907	6024784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ENSMUST00000077175.7	chr10	+	4975	28	FSM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_10	22.7726281441689	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTGAGAGGTGATGT	NA	False	NA	22	True	NA	NA	NA	84458155	84563042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ENSMUST00000077208.6	chr8	-	449	1	FSM	ENSMUSG00000059775.6	ENSMUST00000077208.6	449	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	106160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAACTTTTTATCGCT	NA	False	NA	NA	False	AATAAA	-37	NA	108166211	108165762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_108165800_108166200
ENSMUST00000077220.14	chr5	-	1617	10	FSM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_7	48.631900316511	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCTGGTTTTGTATAGGT	NA	False	NA	-4	True	ATTAAA	-28	NA	110256063	110251840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255721
ENSMUST00000077243.5	chrX	-	1032	7	FSM	ENSMUSG00000031371.15	ENSMUST00000077243.5	1032	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	203.601462557506	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCCTTCGGACTACT	NA	False	NA	-12	True	AATAAA	-17	NA	72502650	72480920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72481172_72489415_72489531_72490533_72490744_72496604_72496667_72498472_72498541_72501579_72501696_72502440
ENSMUST00000077271.9	chr3	+	4078	18	FSM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	154.691388272057	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTCTTCCTGCTTCA	NA	False	NA	11	True	ATTAAA	-25	NA	67337428	67383862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ENSMUST00000077290.9	chr6	-	2399	10	FSM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	0	0	0	0	multi-exon	FALSE	canonical	3	1547	junction_7	244.688060423022	3195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTGCCTTTTATTTT	8890	False	NA	23	True	TTTAAA	-24	NA	47790364	47773074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ENSMUST00000077338.12	chr7	+	1465	6	FSM	ENSMUSG00000057229.12	ENSMUST00000077338.12	1465	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	20.2938414303453	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGCCTTTCCTCCCA	1739	False	NA	39	True	NA	NA	NA	25318838	25324976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_25318886_25320320_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
ENSMUST00000077340.14	chr1	-	2288	11	FSM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_8	16.9602476397015	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGGAGTTATAGAATG	NA	False	NA	-14	True	AATAAA	-22	NA	135211822	135190449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
ENSMUST00000077353.15	chr9	-	1605	14	FSM	ENSMUSG00000032126.17	ENSMUST00000077353.15	1605	14	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_4	86.0870620274656	1888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTTCTGTTGTAAAAC	1408	False	NA	9	True	AATAAA	-33	NA	44255525	44247635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
ENSMUST00000077367.11	chr3	+	1779	11	FSM	ENSMUSG00000028048.12	ENSMUST00000077367.11	1779	11	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	28.1177879642051	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTCCTGTGCTATCTGTG	NA	False	NA	1	True	ATTAAA	-11	NA	89110234	89115986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ENSMUST00000077376.3	chr5	+	1677	3	FSM	ENSMUSG00000047635.7	ENSMUST00000077376.3	1677	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	7.5	427	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCGAGGAAGCTGTGG	5398	False	NA	17	True	NA	NA	NA	124466160	124479907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_124466293_124476689_124476999_124478671
ENSMUST00000077389.8	chr3	+	444	1	FSM	ENSMUSG00000057036.8	ENSMUST00000077389.8	444	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35292	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCACACCGGAGGTT	NA	False	NA	NA	False	NA	NA	NA	24387231	24387675	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_24387200_24387700
ENSMUST00000077407.12	chr6	+	4118	28	FSM	ENSMUSG00000031865.17	ENSMUST00000077407.12	4118	28	0	0	0	0	multi-exon	TRUE	canonical	3	372	junction_1	39.6793042772762	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	493	False	NA	NA	False	ATTAAA	-15	NA	83142901	83177098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ENSMUST00000077435.5	chr19	-	888	1	FSM	ENSMUSG00000057605.5	ENSMUST00000077435.5	888	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	964	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTTAACCTCATTAAACA	2199	False	NA	-44	True	NA	NA	NA	45439634	45438746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_45438700_45439600
ENSMUST00000077451.14	chr11	+	3297	21	FSM	ENSMUSG00000017686.18	ENSMUST00000077451.14	3297	21	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_19	176.261425161605	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099844	80157638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80148339_80148463_80156567
ENSMUST00000077477.12	chr17	-	1120	7	FSM	ENSMUSG00000061207.12	ENSMUST00000077477.12	1120	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	4.59770474137791	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTCTGTGTCCTTTGT	5573	False	NA	-4	True	AATAAA	-16	NA	35055921	35042968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35043301_35043489_35043638_35043726_35043825_35050988_35051129_35051421_35051518_35055405_35055543_35055752
ENSMUST00000077494.13	chr17	-	1340	12	FSM	ENSMUSG00000024426.18	ENSMUST00000077494.13	1340	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	34.4359508470988	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACCGACAAAAAGTGACT	NA	False	NA	-12	True	AATAAA	-24	NA	36220938	36208500	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ENSMUST00000077495.3	chr13	+	309	1	FSM	ENSMUSG00000085340.2	ENSMUST00000077495.3	309	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAAACTAATGGAGAGT	NA	False	NA	NA	False	NA	NA	NA	100906971	100907280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_100907000_100907300
ENSMUST00000077577.8	chr15	-	1743	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	0	0	0	0	multi-exon	FALSE	canonical	3	3388	junction_1	4057.60923040485	62985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	31	False	NA	NA	False	AGTAAA	-18	NA	98832446	98829305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
ENSMUST00000077605.12	chr16	+	2708	11	FSM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_10	433.482883168413	1735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6054	False	NA	NA	False	AATAAA	-17	NA	22926508	22932696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ENSMUST00000077609.12	chr7	+	1831	15	FSM	ENSMUSG00000030795.19	ENSMUST00000077609.12	1831	15	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	273.376618440941	1447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1183	False	NA	37	True	ATTAAA	-20	NA	127566661	127581204	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571012_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ENSMUST00000077626.13	chr2	-	1636	12	FSM	ENSMUSG00000038383.17	ENSMUST00000077626.13	1636	12	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_4	21.4987987363815	884	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTTCTGATGACATGT	NA	False	NA	0	True	AATAAA	-23	NA	155199350	155120162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155120570_155134609_155134753_155139002_155139128_155140965_155141110_155143120_155143276_155156421_155156520_155170500_155170602_155173068_155173179_155177280_155177344_155178601_155178662_155187567_155187633_155199185
ENSMUST00000077680.10	chrX	+	3277	10	FSM	ENSMUSG00000000134.18	ENSMUST00000077680.10	3277	10	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	30.4046780026437	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTCCCGTTCTTGTT	NA	False	NA	25	True	AATAAA	-36	NA	7628896	7641441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUST00000077709.11	chr4	+	3765	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGTAAGGGACCATGTT	NA	False	NA	18	True	AATAAA	-18	NA	63477017	63504594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ENSMUST00000077755.11	chr1	+	1914	4	FSM	ENSMUSG00000008475.14	ENSMUST00000077755.11	1914	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	649.932817040859	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTAACTCTCCAGTTA	NA	False	NA	100	True	AATAAA	-35	NA	152642292	152651348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_152642619_152644611_152644685_152647114_152647292_152650010
ENSMUST00000077791.8	chr8	+	1811	4	FSM	ENSMUSG00000055835.11	ENSMUST00000077791.8	1811	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	17.3076733143296	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGTTTTTGGCTTTTT	NA	False	NA	13	True	AATAGA	-20	NA	112370137	112397643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_112370245_112385017_112385074_112392709_112392837_112396122
ENSMUST00000077798.13	chr2	+	2739	17	FSM	ENSMUSG00000027067.17	ENSMUST00000077798.13	2739	17	0	0	0	0	multi-exon	FALSE	canonical	3	1260	junction_7	140.688874382447	3010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867577	84877453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ENSMUST00000077817.8	chr11	+	2126	13	FSM	ENSMUSG00000007850.17	ENSMUST00000077817.8	2126	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	133.956356906104	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268595	50277355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50276603
ENSMUST00000077839.13	chr10	-	1813	4	FSM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	30.2691628926573	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTGAGTATGACTTG	NA	False	NA	NA	False	AATAAA	-21	NA	67121084	67102467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_67103946_67105884_67105926_67111348_67111434_67120875
ENSMUST00000077856.13	chr11	+	614	5	FSM	ENSMUSG00000063316.14	ENSMUST00000077856.13	614	5	0	0	0	0	multi-exon	FALSE	canonical	3	8302	junction_4	1985.8892844265	160573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	2241	False	NA	62	True	ATTAAA	-18	NA	101333123	101336355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336157_101336264
ENSMUST00000077876.4	chrX	-	1002	5	FSM	ENSMUSG00000046032.17	ENSMUST00000077876.4	1002	5	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	142.088880634622	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTTTTTCTCCTTAA	NA	False	NA	-15	True	ATTAAA	-15	NA	100266169	100255564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_100255953_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ENSMUST00000077909.9	chr7	-	4612	20	FSM	ENSMUSG00000031024.14	ENSMUST00000077909.9	4612	20	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_19	35.017605386157	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109215960	109123126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109215504
ENSMUST00000077915.10	chr11	+	364	5	FSM	ENSMUSG00000057322.13	ENSMUST00000077915.10	364	5	0	0	0	0	multi-exon	FALSE	canonical	3	5140	junction_1	6068.87239835375	190743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559373	114563157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_114559453_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ENSMUST00000077938.10	chr17	-	1405	9	FSM	ENSMUSG00000061046.10	ENSMUST00000077938.10	1405	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	8.07387763097757	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGCAGGTCTGTTTATT	4253	False	NA	-1	True	NA	NA	NA	26004647	26001762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977_26004169_26004401
ENSMUST00000077967.13	chr7	+	2647	8	FSM	ENSMUSG00000053091.17	ENSMUST00000077967.13	2647	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	18.4113984215413	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCGTGTCTGGGTCT	NA	False	NA	11	True	AATAAA	-17	NA	66339705	66364492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ENSMUST00000077977.14	chr2	+	3381	16	FSM	ENSMUSG00000026858.19	ENSMUST00000077977.14	3381	16	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	8.28385310240484	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGTGTCTTGCTGGGT	NA	False	NA	6	True	GATAAA	-16	NA	30254244	30275533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30254318_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
ENSMUST00000078001.7	chr7	-	1059	6	FSM	ENSMUSG00000062773.7	ENSMUST00000078001.7	1059	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	1.72046505340853	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCGCGTGCATGCATG	1002	False	NA	NA	False	AATAAA	-21	NA	24371475	24367431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_24367828_24367933_24368066_24369138_24369325_24369757_24369899_24370003_24370109_24371376
ENSMUST00000078021.13	chr5	-	2015	19	FSM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_15	25.8010551033179	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGCATAATTCTTTT	NA	False	NA	NA	False	CATAAA	-27	NA	107745505	107696832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ENSMUST00000078079.11	chr18	+	2865	3	FSM	ENSMUSG00000057561.11	ENSMUST00000078079.11	2865	3	0	0	0	0	multi-exon	FALSE	canonical	3	1498	junction_1	106	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAATGTTTTTTTTTTCT	NA	False	NA	20	True	ATTAAA	-17	NA	46730770	46743278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_46730868_46731707_46731768_46740570
ENSMUST00000078124.8	chr12	-	2940	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	55.9603033904888	1629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAAGCTGTTGAGATG	NA	False	NA	-11	True	AATAAA	-12	NA	54909662	54905601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
ENSMUST00000078155.12	chr6	-	2437	14	FSM	ENSMUSG00000003500.14	ENSMUST00000078155.12	2437	14	0	0	0	0	multi-exon	TRUE	canonical	1	70	junction_10	46.9877234375763	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGATCCTGTTTCTGT	8	True	NA	-1	True	AATAAA	-19	NA	29212296	29200435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067
ENSMUST00000078214.8	chr6	-	1583	13	FSM	ENSMUSG00000059182.9	ENSMUST00000078214.8	1583	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	147.952390052416	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGACTTAGCCTGGTA	862	False	NA	-7	True	AATAAA	-18	NA	51989495	51836145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980715_51989314
ENSMUST00000078218.11	chr15	+	1371	12	FSM	ENSMUSG00000058586.13	ENSMUST00000078218.11	1371	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	9.92534113742268	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCAAGTGGCTGTTGTC	NA	False	NA	17	True	AATAAA	-18	NA	82984404	83000875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_82984549_82985844_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82987210_82988509_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
ENSMUST00000078222.9	chr2	+	1518	10	FSM	ENSMUSG00000000308.15	ENSMUST00000078222.9	1518	10	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	32.5602954456217	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGTGTTATTTCTAT	801	False	NA	32	True	AGTAAA	-20	NA	121188256	121194218	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121188341_121189276_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
ENSMUST00000078286.6	chr17	-	2606	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	0	0	0	0	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	7157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAGCCGTTCGCCCAG	NA	False	NA	NA	False	NA	NA	NA	47093582	47084832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ENSMUST00000078332.13	chr1	+	1894	9	FSM	ENSMUSG00000026150.15	ENSMUST00000078332.13	1894	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	190.780264637095	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	13	True	AATAAA	-13	NA	82702610	82730111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82719538_82719698_82724803_82724864_82728240_82728326_82729305
ENSMUST00000078357.5	chr16	-	3440	5	FSM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	14.2894191624432	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTGTATGGTGTTTGT	NA	False	NA	-5	True	ATTAAA	-31	NA	10131832	10099612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_10102480_10103318_10103466_10105918_10106025_10110125_10110289_10131675
ENSMUST00000078362.13	chr11	-	1889	13	FSM	ENSMUSG00000064090.15	ENSMUST00000078362.13	1889	13	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_12	13.1368332899862	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACTTTTAAGCATTCC	NA	False	NA	-7	True	AATAAA	-28	NA	26543920	26421403	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543589
ENSMUST00000078374.13	chr9	-	3520	27	FSM	ENSMUSG00000032407.15	ENSMUST00000078374.13	3520	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	216.387107234962	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGTTGTTTTTTTGCCC	8191	False	NA	-1	True	AATAAA	-17	NA	95394049	95343030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ENSMUST00000078432.5	chr7	+	772	4	FSM	ENSMUSG00000030432.13	ENSMUST00000078432.5	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	6459	junction_1	109.515092820832	29122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGAGTCCACTGACTTC	2809	False	NA	-19	True	NA	NA	NA	4795988	4797525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_4796409_4796501_4796626_4797062_4797182_4797416
ENSMUST00000078459.8	chr17	-	1400	9	FSM	ENSMUSG00000058704.10	ENSMUST00000078459.8	1400	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	123.900098365578	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	74601785	74507696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_74508321_74509255_74509361_74527482_74527536_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
ENSMUST00000078478.8	chr9	-	2908	6	FSM	ENSMUSG00000043587.16	ENSMUST00000078478.8	2908	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	3.9293765408777	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTACAGCTTACGGTG	NA	False	NA	-2	True	AATAAA	-16	NA	96771482	96705396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011_96722171_96738420_96738553_96771411
ENSMUST00000078509.12	chr17	-	2403	16	FSM	ENSMUSG00000024039.16	ENSMUST00000078509.12	2403	16	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	29.2615789047686	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGTGTCGACCTTATT	1945	False	NA	-17	True	NA	NA	NA	31856139	31831614	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ENSMUST00000078528.7	chr11	-	1175	6	FSM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	0	0	0	0	multi-exon	FALSE	canonical	3	4814	junction_4	225.05234946563	1832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCTTTCGCCCACATCAG	NA	False	NA	-26	True	AATAAA	-32	NA	70873852	70868661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70869071_70869253_70869377_70869514_70869611_70870835_70870930_70872995_70873147_70873550
ENSMUST00000078568.12	chr3	+	2248	13	FSM	ENSMUSG00000050150.17	ENSMUST00000078568.12	2248	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	40.4505013016595	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGTCTCATGATTTAT	NA	False	NA	7	True	ATTAAA	-19	NA	135053794	135103588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720_135099830_135100604_135100742_135103356
ENSMUST00000078572.9	chr9	-	1894	10	FSM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	21.338541031039	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACGCCCATGGTGACCA	6124	False	NA	-16	True	AATAAA	-17	NA	21504068	21499977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504032
ENSMUST00000078573.5	chr13	-	571	4	FSM	ENSMUSG00000061474.12	ENSMUST00000078573.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_2	492.52884856287	2009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACAAGCTGCCCTGTAC	NA	False	NA	NA	False	NA	NA	NA	100881165	100872584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100872782_100875521_100875704_100877675_100877740_100881037
ENSMUST00000078605.7	chrX	-	1776	10	FSM	ENSMUSG00000058252.7	ENSMUST00000078605.7	1776	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2.8588178511708	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTCTTTTATGATG	6971	False	NA	NA	False	AATAAA	-20	NA	134594539	134555446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_134555875_134558185_134558350_134559471_134559654_134559749_134559968_134561192_134561330_134565131_134565353_134566154_134566276_134570064_134570177_134593910_134594046_134594481
ENSMUST00000078665.13	chr8	+	1333	9	FSM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_2	36.5391485259304	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCATCCTTGGTGTCAG	NA	False	NA	23	True	AATAAA	-29	NA	85798385	85801791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
ENSMUST00000078676.6	chr4	-	547	4	FSM	ENSMUSG00000063882.13	ENSMUST00000078676.6	547	4	0	0	0	0	multi-exon	FALSE	canonical	3	1017	junction_2	25.9272486435067	8534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCTTCCTTTGCC	7657	False	NA	-7	True	AATAAA	-17	NA	115932268	115924161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_115924370_115927059_115927222_115927933_115927955_115932112
ENSMUST00000078729.9	chr13	-	472	1	FSM	ENSMUSG00000078180.5	ENSMUST00000078729.9	472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1344	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGTCCAGATGGCTAAT	NA	False	NA	NA	False	NA	NA	NA	120766201	120765729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_120765700_120766200
ENSMUST00000078766.10	chr9	+	467	1	FSM	ENSMUSG00000058838.10	ENSMUST00000078766.10	467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1652	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTGTGTATGCGTTAAT	NA	False	NA	NA	False	NA	NA	NA	83291712	83292179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_83291700_83292200
ENSMUST00000078775.13	chrX	-	1162	9	FSM	ENSMUSG00000079845.9	ENSMUST00000078775.13	1162	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_8	89.7743699504486	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	72126084	72117950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125590_72125674_72125988
ENSMUST00000078803.5	chr15	-	911	10	FSM	ENSMUSG00000115987.2	ENSMUST00000078803.5	911	10	0	0	0	0	multi-exon	FALSE	canonical	3	892	junction_9	85.8889607589177	3059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9603	False	NA	-25	True	AATAAA	-17	NA	76510274	76506308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
ENSMUST00000078804.12	chr16	+	491	5	FSM	ENSMUSG00000060636.15	ENSMUST00000078804.12	491	5	0	0	0	0	multi-exon	FALSE	canonical	3	3858	junction_1	2402.68870226669	152105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTCTCTTTGTTAAG	NA	False	NA	34	True	AATAAA	-45	NA	32876822	32880559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32876881_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ENSMUST00000078845.13	chr7	+	637	7	FSM	ENSMUSG00000060791.16	ENSMUST00000078845.13	637	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	149.1011029097	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAACGACATGGTATCT	146	False	NA	NA	False	AATAAA	-19	NA	28140351	28145964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28140467_28140858_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796
ENSMUST00000078902.8	chr12	+	2467	10	FSM	ENSMUSG00000020646.18	ENSMUST00000078902.8	2467	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.1864735461481	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAGATTCTATCTAAACA	NA	False	NA	NA	False	ATTAAA	-31	NA	24881616	25010304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_24881774_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ENSMUST00000078912.7	chr3	-	3368	18	FSM	ENSMUSG00000027889.18	ENSMUST00000078912.7	3368	18	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_17	58.315690197265	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATAAAAAGATTATTTA	NA	False	NA	-31	True	NA	NA	NA	107992715	107981402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107992562
ENSMUST00000078918.10	chr7	-	1053	6	FSM	ENSMUSG00000062797.15	ENSMUST00000078918.10	1053	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	509.123403508422	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTGAAATACCATTACA	NA	False	NA	-1	True	AATAAA	-18	NA	89590274	89567910	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89579527_89579669_89584934_89585173_89590176
ENSMUST00000078944.13	chrX	+	4350	11	FSM	ENSMUSG00000025626.17	ENSMUST00000078944.13	4350	11	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_10	29.4423164849507	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGTCTGCTTTGTAA	NA	False	NA	17	True	AATAAA	-17	NA	52001142	52045820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_52001314_52005429_52005614_52006042_52006145_52020449_52020584_52020857_52020902_52029101_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
ENSMUST00000078961.6	chr17	+	2631	11	FSM	ENSMUSG00000024301.11	ENSMUST00000078961.6	2631	11	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	121.140785865042	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATTGTGATGTGTTTG	NA	False	NA	8	True	AATAAA	-20	NA	27136064	27151557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
ENSMUST00000078975.8	chr11	+	1573	6	FSM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_4	4.31740662898458	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCTTGTCTGTGCTC	NA	False	NA	5	True	AATAAA	-19	NA	102080494	102084907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
ENSMUST00000079033.6	chr19	-	885	5	FSM	ENSMUSG00000057506.6	ENSMUST00000079033.6	885	5	0	0	0	0	multi-exon	FALSE	canonical	3	1199	junction_4	51.0165414351071	2327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAACAAATGTGGGT	963	False	NA	NA	False	ATTAAA	-5	NA	44134885	44127697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44128153_44130562_44130668_44131459_44131580_44134379_44134497_44134797
ENSMUST00000079080.13	chr11	-	3019	7	FSM	ENSMUSG00000001034.18	ENSMUST00000079080.13	3019	7	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	27.9861076647365	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTCATTTTTGGGGT	NA	False	NA	1	True	AATACA	-19	NA	61385122	61379637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472_61384781_61384905
ENSMUST00000079085.11	chr3	-	480	5	FSM	ENSMUSG00000062006.13	ENSMUST00000079085.11	480	5	0	0	0	0	multi-exon	FALSE	canonical	3	6284	junction_4	1283.0290331867	144780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTACGCTTCCGTTATCT	NA	False	NA	-19	True	AATAAA	-12	NA	130524047	130520487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523966
ENSMUST00000079121.4	chr17	-	1219	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_2	30.9120616516523	4452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTTACTGTGTTGTG	NA	False	NA	-9	True	ATTAAA	-18	NA	13135232	13130235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
ENSMUST00000079158.13	chr16	-	5811	30	FSM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	0	0	0	0	multi-exon	TRUE	canonical	3	160	junction_25	98.9917903368873	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20245144	20150052	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ENSMUST00000079213.6	chr4	-	1516	10	FSM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	0	0	0	0	multi-exon	TRUE	canonical	3	462	junction_7	44.4233283170614	2036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTTTTTGTTTCTT	NA	False	NA	-8	True	ATTAAA	-20	NA	108436533	108422066	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
ENSMUST00000079223.11	chr4	+	1891	16	FSM	ENSMUSG00000028573.19	ENSMUST00000079223.11	1891	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	4.66476151587624	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCACTTATGTCTGT	NA	False	NA	10	True	AATAAA	-23	NA	95445743	95815176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_95445829_95473468_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95710214_95710363_95725821_95725897_95732309_95732431_95737818_95737914_95811161_95811224_95814959
ENSMUST00000079282.8	chr7	-	4255	20	FSM	ENSMUSG00000031024.14	ENSMUST00000079282.8	4255	20	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_19	31.6037621800557	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTGTGTTCCTTTCAC	NA	False	NA	2	True	AATAAA	-26	NA	109216354	109123117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264
ENSMUST00000079327.12	chr19	+	2639	10	FSM	ENSMUSG00000024947.18	ENSMUST00000079327.12	2639	10	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	99.9901229690114	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	588	False	NA	21	True	GATAAA	-21	NA	6385042	6390919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6385113_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ENSMUST00000079403.11	chr7	+	2981	14	FSM	ENSMUSG00000062031.14	ENSMUST00000079403.11	2981	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	11.3032434995212	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGTGATGGATTCATG	NA	False	NA	15	True	ATTAAA	-27	NA	140521493	140527577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ENSMUST00000079414.12	chr7	+	2610	19	FSM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	0	0	0	0	multi-exon	FALSE	canonical	2	65	junction_12	24.7032386540712	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATGTTTATTTCAG	NA	False	NA	10	True	AATAAA	-20	NA	35096479	35138114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
ENSMUST00000079419.12	chr14	+	883	4	FSM	ENSMUSG00000012405.17	ENSMUST00000079419.12	883	4	0	0	0	0	multi-exon	FALSE	canonical	3	1636	junction_1	5972.09066315046	137688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198666	4200736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_4198874_4199235_4199418_4199652_4199790_4200379
ENSMUST00000079421.15	chr17	+	2581	8	FSM	ENSMUSG00000002307.17	ENSMUST00000079421.15	2581	8	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_5	66.597787546753	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5569	False	NA	12	True	AATAAA	-23	NA	34128418	34134564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ENSMUST00000079439.10	chr7	-	877	4	FSM	ENSMUSG00000061702.11	ENSMUST00000079439.10	877	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.16024689946929	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGAGTCTGTCTGTGTTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	25374591	25368563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_25368924_25369910_25370061_25372849_25373086_25374460
ENSMUST00000079510.6	chr8	-	3713	18	FSM	ENSMUSG00000052488.8	ENSMUST00000079510.6	3713	18	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_13	118.126552277382	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228963	73214332	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ENSMUST00000079542.13	chrX	+	3163	9	FSM	ENSMUSG00000000134.18	ENSMUST00000079542.13	3163	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	94.1407689314252	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628902	7641438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUST00000079560.10	chr6	-	3839	14	FSM	ENSMUSG00000040669.15	ENSMUST00000079560.10	3839	14	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_10	176.028608487135	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTACTGCATTCTGCT	9596	False	NA	-12	True	ATTAAA	-41	NA	122313974	122294689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816
ENSMUST00000079589.11	chr11	-	3286	20	FSM	ENSMUSG00000020923.18	ENSMUST00000079589.11	3286	20	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_14	97.0817686596932	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGTCTA	9161	False	NA	60	True	NA	NA	NA	102207506	102196749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
ENSMUST00000079601.13	chr16	-	3975	13	FSM	ENSMUSG00000013089.16	ENSMUST00000079601.13	3975	13	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_9	424.638105724549	2339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCAACCTGCCTCTTT	7486	False	NA	-13	True	AATAAA	-22	NA	22258469	22200058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22254626_22254678_22254769_22254818_22254950_22255039_22255187_22255311_22258266
ENSMUST00000079634.8	chr7	+	1020	6	FSM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	0	0	0	0	multi-exon	FALSE	canonical	3	1190	junction_2	58.9528625259198	5564	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTGTCTGGAGAGTAC	NA	False	NA	31	True	ATTAAA	-43	NA	25358588	25367457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_25358809_25362561_25362676_25363751_25363874_25364845_25364987_25365677_25365768_25367124
ENSMUST00000079642.8	chr17	-	2018	4	FSM	ENSMUSG00000057835.8	ENSMUST00000079642.8	2018	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	5.43650214343336	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCATTCTCTTGGATAGC	NA	False	NA	NA	False	AATAAA	-16	NA	56185930	56171891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56173651_56175302_56175364_56175558_56175686_56185859
ENSMUST00000079644.13	chr4	-	1628	8	FSM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	0	0	0	0	multi-exon	FALSE	canonical	3	9851	junction_2	327.608589257214	4656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151801	119135177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ENSMUST00000079648.12	chr10	-	716	3	FSM	ENSMUSG00000063320.12	ENSMUST00000079648.12	716	3	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_2	73.5	4014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTACTATACATTCTTGG	NA	False	NA	0	True	NA	NA	NA	82459030	82455684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_82456052_82458541_82458659_82458798
ENSMUST00000079691.13	chr2	-	1963	13	FSM	ENSMUSG00000027610.18	ENSMUST00000079691.13	1963	13	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_12	109.121491925285	2395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCATTGTTTCATGTAC	8350	False	NA	-2	True	AATAAA	-19	NA	155434730	155405100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
ENSMUST00000079703.11	chr15	+	1054	7	FSM	ENSMUSG00000059586.11	ENSMUST00000079703.11	1054	7	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_4	74.7677886674618	2832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	16	True	AATAAA	-17	NA	59246135	59473533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
ENSMUST00000079716.6	chr18	+	775	7	FSM	ENSMUSG00000062328.9	ENSMUST00000079716.6	775	7	0	0	0	0	multi-exon	FALSE	canonical	3	6761	junction_1	2088.63605148325	135895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGACTGTCTAGTAGC	NA	False	NA	21	True	ATTAAA	-37	NA	75133547	75136452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
ENSMUST00000079724.9	chr3	-	1139	7	FSM	ENSMUSG00000027944.14	ENSMUST00000079724.9	1139	7	0	0	0	0	multi-exon	FALSE	canonical	3	1573	junction_5	145.593040126695	10690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGTTTTGTCAAGGTC	7190	False	NA	NA	False	AATAAA	-26	NA	89906004	89902752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834
ENSMUST00000079735.12	chr15	-	886	5	FSM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	0	0	0	0	multi-exon	FALSE	canonical	3	3551	junction_4	804.634194836387	132521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	NA	False	NA	-20	True	AATAAA	-27	NA	34443786	34440650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443330
ENSMUST00000079764.14	chr8	+	922	4	FSM	ENSMUSG00000059355.14	ENSMUST00000079764.14	922	4	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_1	13.7679176187089	2614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGCTTCTCTTTTGTTC	NA	False	NA	36	True	TATAAA	-25	NA	85807368	85808968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85807693_85807801_85807908_85808405_85808504_85808574
ENSMUST00000079780.10	chr16	+	4258	4	FSM	ENSMUSG00000022686.15	ENSMUST00000079780.10	4258	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	15.8954920234218	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAGTAATGTGAATTTAA	NA	False	NA	7	True	AATAAA	-15	NA	19578983	19591213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19587493
ENSMUST00000079791.11	chr16	+	4789	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCCTGTGGTTTTGACC	2489	False	NA	22	True	AATAAA	-27	NA	32249741	32293888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
ENSMUST00000079833.6	chr10	+	2604	12	FSM	ENSMUSG00000019878.9	ENSMUST00000079833.6	2604	12	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_10	23.7006119808005	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTCCTTCTCATTGTT	NA	False	NA	13	True	NA	NA	NA	57362491	57389231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57387539_57387625_57387998
ENSMUST00000079857.9	chr2	+	3004	15	FSM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	17.0899481137484	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGTTTGTTATGCAGA	NA	False	NA	NA	False	AATAAA	-18	NA	131028877	131040417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033687_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ENSMUST00000079883.12	chr10	+	1804	7	FSM	ENSMUSG00000113949.2	ENSMUST00000079883.12	1804	7	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_5	41.6239781322684	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438713	80451617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ENSMUST00000079896.9	chr8	+	916	5	FSM	ENSMUSG00000025521.16	ENSMUST00000079896.9	916	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	253.637536654179	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAATGTTTTGTATGTTGT	NA	False	NA	23	True	TATAAA	-15	NA	65399905	65421683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65418190_65418294_65421362
ENSMUST00000079949.13	chr11	-	2588	17	FSM	ENSMUSG00000009079.17	ENSMUST00000079949.13	2588	17	0	0	0	0	multi-exon	FALSE	canonical	3	2776	junction_9	796.06296616144	1361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTCCTCCTCTGTTCTC	NA	False	NA	-13	True	AATAAA	-23	NA	5049266	5019688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ENSMUST00000079961.14	chr8	+	2707	22	FSM	ENSMUSG00000032939.15	ENSMUST00000079961.14	2707	22	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_1	70.7360075664432	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	94941191	95041488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ENSMUST00000079970.6	chr7	-	1593	8	FSM	ENSMUSG00000063802.6	ENSMUST00000079970.6	1593	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_7	148.934720667842	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTATGCTGTCTTGCATT	NA	False	NA	-7	True	AATAAA	-16	NA	4688067	4663519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687569_4687892
ENSMUST00000079976.10	chr2	-	1884	8	FSM	ENSMUSG00000002105.16	ENSMUST00000079976.10	1884	8	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_6	25.0762103702017	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4355	False	NA	0	True	AATAAA	-15	NA	90900574	90892135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895926_90896060_90896357_90896472_90900499
ENSMUST00000079987.13	chrX	-	2530	13	FSM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_5	66.9966831683148	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCATGGTGTTTGT	NA	False	NA	-36	True	AATAAA	-4	NA	95000519	94978940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ENSMUST00000079996.13	chr5	-	3169	7	FSM	ENSMUSG00000053581.14	ENSMUST00000079996.13	3169	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	14.7271480229163	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTAGACAGTTTCTCTA	8677	False	NA	-6	True	AATAAA	-24	NA	139470304	139456965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_139459310_139459484_139459551_139460607_139460760_139464221_139464354_139467720_139467816_139468456_139468553_139470020
ENSMUST00000079998.13	chr1	-	1398	8	FSM	ENSMUSG00000048495.17	ENSMUST00000079998.13	1398	8	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_6	15.7025930524684	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATTGGTGGAGTGGCCG	NA	False	NA	-18	True	AATAAA	-43	NA	57445833	57427398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440546_57440683_57445542
ENSMUST00000080001.9	chr1	-	1007	7	FSM	ENSMUSG00000062963.11	ENSMUST00000080001.9	1007	7	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_6	130.826539101718	3233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGATG	7283	False	NA	0	True	AATAAA	-18	NA	171122597	171116135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171117790_171122206_171122401_171122493
ENSMUST00000080058.11	chr7	-	2107	6	FSM	ENSMUSG00000058709.12	ENSMUST00000080058.11	2107	6	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_5	57.8840219749803	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26866227	26858082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26866108
ENSMUST00000080085.9	chr5	+	2930	17	FSM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	61.5435567301728	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	7985	False	NA	10	True	AATAAA	-23	NA	3853183	3891359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ENSMUST00000080089.11	chr18	+	2799	21	FSM	ENSMUSG00000024231.16	ENSMUST00000080089.11	2799	21	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	205.086591468092	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	-19	True	NA	72	True	ATTAAA	-28	NA	3383224	3435385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414173_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ENSMUST00000080149.6	chr4	+	1902	8	FSM	ENSMUSG00000063524.14	ENSMUST00000080149.6	1902	8	0	0	0	0	multi-exon	FALSE	canonical	3	2891	junction_5	3495.72395351573	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150327942	150333330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ENSMUST00000080178.13	chr4	+	3019	15	FSM	ENSMUSG00000011257.20	ENSMUST00000080178.13	3019	15	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	59.8703105189263	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGCCAGTTTTATGTT	NA	False	NA	8	True	AATAAA	-31	NA	123176703	123192625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ENSMUST00000080249.6	chr17	-	2872	5	FSM	ENSMUSG00000063383.6	ENSMUST00000080249.6	2872	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	1.11803398874989	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGGCTGTTTCCATT	NA	False	NA	NA	False	NA	NA	NA	22385171	22363339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_22365516_22366369_22366497_22369015_22369064_22382167_22382317_22384799
ENSMUST00000080281.14	chr14	+	1922	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	0	0	0	0	multi-exon	FALSE	canonical	3	8735	junction_1	3197.35060462391	137346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTATCTTTTATGTT	NA	False	NA	NA	False	AATAAA	-18	NA	4198628	4201873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
ENSMUST00000080299.7	chr15	-	1676	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	11.0453610171873	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGCATTTTGTTTACAA	NA	False	NA	-1	True	AATAAA	-20	NA	93234689	93182158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
ENSMUST00000080316.8	chr16	+	720	4	FSM	ENSMUSG00000014075.16	ENSMUST00000080316.8	720	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	127.027556065603	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTCATGAATAGTTTT	NA	False	NA	5	True	AATAAA	-17	NA	32238563	32247913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32238746_32241637_32241772_32245675_32245740_32247573
ENSMUST00000080324.4	chrX	-	2862	5	FSM	ENSMUSG00000071745.2	ENSMUST00000080324.4	2862	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	17.5499287747842	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAGTGTAGATGTCTAA	NA	False	NA	NA	False	AATAAA	-16	NA	72193056	72180837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72183280_72185114_72185281_72186572_72186670_72186962_72187031_72192967
ENSMUST00000080356.10	chr7	-	1365	7	FSM	ENSMUSG00000061479.16	ENSMUST00000080356.10	1365	7	0	0	0	0	multi-exon	FALSE	canonical	3	1453	junction_6	315.533102683203	4107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-26	NA	26895696	26886431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895415
ENSMUST00000080411.13	chrX	-	1859	4	FSM	ENSMUSG00000031422.17	ENSMUST00000080411.13	1859	4	0	0	0	0	multi-exon	FALSE	canonical	3	2872	junction_1	198.526236721162	8208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135642101	135633701	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641958
ENSMUST00000080431.8	chr5	-	3218	18	FSM	ENSMUSG00000006641.13	ENSMUST00000080431.8	3218	18	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_17	31.4360998487793	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	NA	False	NA	-1	True	AATAAA	-19	NA	31206268	31193379	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31206095
ENSMUST00000080449.7	chr12	+	2524	2	FSM	ENSMUSG00000059970.8	ENSMUST00000080449.7	2524	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTCTGGCGTTTTCAA	NA	False	NA	NA	False	AGTAAA	-20	NA	76450949	76453712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_76451064_76451302
ENSMUST00000080492.7	chr17	+	383	4	FSM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	0	0	0	0	multi-exon	FALSE	canonical	3	5436	junction_1	2487.77200634535	181452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTTGTGTATGTGTGA	NA	False	NA	-1	True	AATAAA	-12	NA	56920415	56921243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_56920449_56920585_56920681_56920906_56921042_56921123
ENSMUST00000080517.14	chr4	+	2116	6	FSM	ENSMUSG00000059482.16	ENSMUST00000080517.14	2116	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	10.0079968025574	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTCTCTGTGCAA	NA	False	NA	11	True	AATAAA	-15	NA	10874497	10899421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897898
ENSMUST00000080536.8	chr8	-	3793	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	0	0	0	0	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	2665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTTTGACTTCTTT	NA	False	NA	NA	False	AATACA	-13	NA	80438369	80410090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ENSMUST00000080557.12	chr6	-	3073	15	FSM	ENSMUSG00000005069.13	ENSMUST00000080557.12	3073	15	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_8	13.6099078555564	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTCCGCTGCTGACGTT	NA	False	NA	-1	True	AATAAA	-44	NA	124392026	124373775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
ENSMUST00000080666.8	chr8	+	2738	14	FSM	ENSMUSG00000036564.18	ENSMUST00000080666.8	2738	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	6.1711295754251	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTCGTGTTTCCTATC	NA	False	NA	9	True	AATAAA	-14	NA	96429690	96441584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_96429806_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
ENSMUST00000080713.5	chrX	+	2507	15	FSM	ENSMUSG00000063785.13	ENSMUST00000080713.5	2507	15	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_8	49.1840047833705	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTACCTTCTGTATTA	NA	False	NA	20	True	AATAAA	-24	NA	47345738	47371330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ENSMUST00000080723.11	chr6	+	3285	18	FSM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_12	67.9651854701079	716	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTTTGTAAATGATTCG	NA	False	NA	NA	False	AATAAA	-27	NA	52690713	52743765	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ENSMUST00000080732.10	chr5	+	2134	4	FSM	ENSMUSG00000037017.16	ENSMUST00000080732.10	2134	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	59.1626759217517	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCGTCTCAGGACTGTT	NA	False	NA	4	True	AATAAA	-13	NA	138115198	138132476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138115251_138123239_138123953_138124715_138124909_138131300
ENSMUST00000080771.10	chr10	+	2844	7	FSM	ENSMUSG00000019826.12	ENSMUST00000080771.10	2844	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	14.3807355707403	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGATACTTGATCTTTAT	NA	False	NA	4	True	AATAAA	-16	NA	41326378	41341570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_41326527_41327084_41328065_41331023_41331192_41331668_41331753_41332527_41332612_41338274_41338357_41340272
ENSMUST00000080812.14	chr6	-	1824	10	FSM	ENSMUSG00000039130.19	ENSMUST00000080812.14	1824	10	0	0	0	0	multi-exon	FALSE	canonical	1	382	junction_8	221.210865270177	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCTAGAGAATTGTTTT	-9	True	NA	-7	True	AATAAA	-18	NA	30391022	30366378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_30366745_30370263_30370471_30372736_30372950_30373241_30373483_30374763_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
ENSMUST00000080813.5	chr7	-	494	5	FSM	ENSMUSG00000061787.16	ENSMUST00000080813.5	494	5	0	0	0	0	multi-exon	FALSE	canonical	3	8882	junction_4	1855.19963548401	198993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	False	NA	-10	True	AATAAA	-12	NA	80995002	80992480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_80992598_80993482_80993549_80994058_80994165_80994604_80994757_80994949
ENSMUST00000080834.15	chr7	-	2181	7	FSM	ENSMUSG00000098022.8	ENSMUST00000080834.15	2181	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	14.682756326158	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGTTCCACTGTGTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	29772325	29755461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29771453_29771565_29772205
ENSMUST00000080839.2	chrX	-	1584	9	FSM	ENSMUSG00000058147.2	ENSMUST00000080839.2	1584	9	0	0	0	0	multi-exon	FALSE	canonical	3	686	junction_5	383.166718772651	3556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-8	True	AATAAA	-16	NA	72308996	72298145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ENSMUST00000080853.11	chr11	-	3283	15	FSM	ENSMUSG00000020717.20	ENSMUST00000080853.11	3283	15	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_1	284.128393297029	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	9559	False	NA	-10	True	AATAAA	-18	NA	106606085	106545043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844
ENSMUST00000080856.14	chr13	-	4325	30	FSM	ENSMUSG00000042590.18	ENSMUST00000080856.14	4325	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	115.519794104579	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	-6	True	ATTAAA	-19	NA	107073466	106930946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ENSMUST00000080860.13	chr10	-	1190	6	FSM	ENSMUSG00000059554.13	ENSMUST00000080860.13	1190	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	8.9977775033616	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTTTCTGTTTAGAA	NA	False	NA	0	True	AATAAA	-21	NA	18110744	18089423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_18089927_18092007_18092031_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ENSMUST00000080884.11	chrX	+	1739	14	FSM	ENSMUSG00000025271.14	ENSMUST00000080884.11	1739	14	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	7.96961686026425	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	19	True	AATAAA	-37	NA	149372916	149426874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ENSMUST00000080893.7	chr11	-	1551	8	FSM	ENSMUSG00000035557.10	ENSMUST00000080893.7	1551	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	2.1946130708196	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGGACTGGTGTGTGTG	NA	False	NA	48	True	AATAAA	-16	NA	100151855	100147042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100147323_100148145_100148172_100148258_100148480_100148568_100148695_100149234_100149397_100149998_100150156_100150520_100150604_100151359
ENSMUST00000080926.13	chr4	+	2027	12	FSM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	0	0	0	0	multi-exon	FALSE	canonical	3	2891	junction_9	3966.2265098293	42419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGCATCTCATTTGTG	NA	False	NA	5	True	AATAAA	-22	NA	150321408	150333336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ENSMUST00000080949.8	chr6	+	1393	2	FSM	ENSMUSG00000053012.18	ENSMUST00000080949.8	1393	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTGTGTCAGTGC	NA	False	NA	5	True	AATAAA	-17	NA	71259263	71262302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_71259302_71260947
ENSMUST00000080975.6	chr10	-	2458	14	FSM	ENSMUSG00000040462.14	ENSMUST00000080975.6	2458	14	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_9	22.2351605990131	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCAGGCTCTGTGGGGA	NA	False	NA	-2	True	AATAAA	-16	NA	126956994	126931518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_126932242_126932498_126932612_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ENSMUST00000081026.11	chr1	-	888	4	FSM	ENSMUSG00000060743.13	ENSMUST00000081026.11	888	4	0	0	0	0	multi-exon	FALSE	canonical	1	55	junction_1	1176.16816635869	10524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACACAGTAGATTCCATC	NA	False	NA	NA	False	AGTAAA	-42	NA	180641112	180630261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_180630768_180637681_180637836_180639363_180639515_180641035
ENSMUST00000081064.12	chrX	+	3227	23	FSM	ENSMUSG00000031262.13	ENSMUST00000081064.12	3227	23	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_9	42.2862392872416	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTTCCGAATTTTTTTT	NA	False	NA	6	True	AATAAA	-17	NA	133208832	133263388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ENSMUST00000081103.12	chr1	-	1462	7	FSM	ENSMUSG00000026656.16	ENSMUST00000081103.12	1462	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	22.7943706500823	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTTCTATTTACTTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	170803696	170788126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_170788670_170788764_170788803_170793270_170793394_170794014_170794270_170795548_170795804_170797042_170797064_170803469
ENSMUST00000081111.14	chr9	+	1858	14	FSM	ENSMUSG00000062867.14	ENSMUST00000081111.14	1858	14	0	0	0	0	multi-exon	TRUE	canonical	3	1280	junction_13	396.993628196225	1721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGTTCAATGGGCAC	995	False	NA	36	True	AATAAA	-29	NA	108437484	108442783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUST00000081180.7	chr1	+	625	4	FSM	ENSMUSG00000061518.12	ENSMUST00000081180.7	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	3394.14034280651	17950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGGCTAGTCTTATGTC	NA	False	NA	23	True	AATAAA	-28	NA	36730529	36732467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_36730771_36731291_36731366_36731511_36731632_36732277
ENSMUST00000081202.6	chr2	+	1107	3	FSM	ENSMUSG00000063019.6	ENSMUST00000081202.6	1107	3	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	136	1683	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGTGTTGCTACTG	5217	False	NA	30	True	AATAAA	-17	NA	157209513	157238683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_157209561_157220968_157221175_157237829
ENSMUST00000081214.12	chr6	-	2682	15	FSM	ENSMUSG00000058486.12	ENSMUST00000081214.12	2682	15	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_12	11.4653426304081	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5776	False	NA	-1	True	NA	NA	NA	34887811	34857360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
ENSMUST00000081219.14	chr6	+	984	6	FSM	ENSMUSG00000029913.15	ENSMUST00000081219.14	984	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	81.8549937389284	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTACGGCTCTTGACTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	65756005	65913357	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_65756178_65808232_65808356_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ENSMUST00000081232.9	chr8	+	4298	33	FSM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_7	32.3080872228611	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTCTGTACCTGATCTGT	NA	False	NA	11	True	AATAAA	-23	NA	118225029	118361881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ENSMUST00000081314.11	chr7	-	4598	22	FSM	ENSMUSG00000030528.13	ENSMUST00000081314.11	4598	22	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_6	41.4509518092853	424	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGGAAGGCAGCATGGG	NA	False	NA	66	True	NA	NA	NA	80184867	80104740	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ENSMUST00000081333.11	chr19	-	1114	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATGTCTTACACTGTG	NA	False	NA	NA	False	AAGAAA	-45	NA	24257969	24238816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
ENSMUST00000081335.13	chr2	+	2900	3	FSM	ENSMUSG00000062175.14	ENSMUST00000081335.13	2900	3	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_2	7.5	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156681926	156697490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_156682159_156686075_156686302_156695048
ENSMUST00000081339.13	chr17	+	4874	16	FSM	ENSMUSG00000058392.14	ENSMUST00000081339.13	4874	16	0	0	0	0	multi-exon	TRUE	canonical	3	488	junction_12	76.5992747282172	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTTGATGTTGCCTC	NA	False	NA	22	True	ATTAAA	-24	NA	32255073	32281839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ENSMUST00000081381.6	chr8	-	4195	23	FSM	ENSMUSG00000031835.17	ENSMUST00000081381.6	4195	23	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_22	51.0282088571954	858	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	8141	False	NA	-7	True	AATAAA	-14	NA	120285474	120234894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ENSMUST00000081387.11	chr11	+	947	4	FSM	ENSMUSG00000017716.16	ENSMUST00000081387.11	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	1683	junction_1	206.515536138729	9136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAAGCTCTGTCTGTCT	NA	False	NA	29	True	AATAAA	-18	NA	117740076	117746558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_117740288_117740579_117740690_117743488_117743607_117746050
ENSMUST00000081551.14	chr1	+	2547	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	0	0	0	0	multi-exon	FALSE	canonical	3	1526	junction_2	186.842443693696	4093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACATGTTTTTTGTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	4928036	4968128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUST00000081554.13	chr5	+	1887	11	FSM	ENSMUSG00000029470.16	ENSMUST00000081554.13	1887	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	30.411182153938	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTTGTCTGTGCTGCCT	NA	False	NA	15	True	ATTAAA	-20	NA	122845646	122867107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
ENSMUST00000081567.11	chr5	+	4060	15	FSM	ENSMUSG00000029267.18	ENSMUST00000081567.11	4060	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	595.009556603068	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108213607	108256870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUST00000081591.7	chr2	+	2111	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	0	0	0	0	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGGCCTTTTTCTTTTA	NA	False	NA	28	True	AATAAA	-36	NA	83474778	83494966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ENSMUST00000081593.13	chrX	+	1825	11	FSM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	0	0	0	0	multi-exon	FALSE	canonical	3	3907	junction_10	353.61602056468	21204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCCTGTCATACTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	105230705	105247305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246442_105246542_105246844
ENSMUST00000081631.10	chr2	-	1894	6	FSM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	7.25534285888682	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTATTTATTTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	109108635	108922641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733_109105021_109108537
ENSMUST00000081649.10	chr7	-	655	2	FSM	ENSMUSG00000060591.10	ENSMUST00000081649.10	655	2	0	0	0	0	multi-exon	FALSE	canonical	3	9574	junction_1	0	31128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	False	NA	-12	True	AATAAA	-22	NA	140535900	140534749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140535087_140535582
ENSMUST00000081650.15	chr15	-	1351	10	FSM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	0	0	0	0	multi-exon	FALSE	canonical	3	16287	junction_9	4874.04926341766	123308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTCCCACATTTCTTT	3518	False	NA	-1	True	AATAAA	-17	NA	79967607	79961991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ENSMUST00000081677.12	chr1	-	896	7	FSM	ENSMUSG00000026035.16	ENSMUST00000081677.12	896	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	63.3151289626386	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGAGTGTCCTTTTTT	NA	False	NA	-2	True	AATAGA	-25	NA	58484645	58470155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484490
ENSMUST00000081702.12	chr15	+	2439	10	FSM	ENSMUSG00000015363.14	ENSMUST00000081702.12	2439	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	6.70175948888899	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCTTTGTGAAGTGTATGG	NA	False	NA	9	True	AATAAA	-19	NA	88960215	88971280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
ENSMUST00000081710.12	chr2	+	2631	16	FSM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_2	40.1836893389456	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTTTTACTTTTTGA	NA	False	NA	24	True	AATAAA	-26	NA	71042177	71093647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUST00000081721.13	chr6	-	2787	20	FSM	ENSMUSG00000029687.17	ENSMUST00000081721.13	2787	20	0	0	0	0	multi-exon	TRUE	canonical	3	406	junction_7	166.792654135859	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGTTAGTATTGCATG	NA	False	NA	NA	False	AATAAA	-26	NA	47571964	47507072	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ENSMUST00000081742.7	chr4	+	2762	6	FSM	ENSMUSG00000065999.14	ENSMUST00000081742.7	2762	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	34.5913283931103	2471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147637795	147669655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_147637884_147646898_147646979_147647371_147647416_147661528_147661587_147665698_147665826_147667290
ENSMUST00000081775.12	chr11	-	4654	5	FSM	ENSMUSG00000038615.18	ENSMUST00000081775.12	4654	5	0	0	0	0	multi-exon	FALSE	canonical	3	711	junction_4	320.112870719064	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTCCCCCCTCTCCCT	NA	False	NA	-6	True	AATAAA	-33	NA	96720794	96708239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ENSMUST00000081827.4	chrX	+	1077	9	FSM	ENSMUSG00000067768.13	ENSMUST00000081827.4	1077	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	104.421546507414	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	15	True	AATAAA	-15	NA	72258037	72266056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72258064_72258379_72258463_72258846_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ENSMUST00000081838.7	chr2	-	1187	5	FSM	ENSMUSG00000015335.17	ENSMUST00000081838.7	1187	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	253.22754095872	2032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCATGCTGCCGTGGAC	NA	False	NA	-10	True	ATTAAA	-9	NA	29983647	29980962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983458
ENSMUST00000081840.6	chr6	-	517	4	FSM	ENSMUSG00000057841.6	ENSMUST00000081840.6	517	4	0	0	0	0	multi-exon	FALSE	canonical	3	14202	junction_3	1766.83093575915	211025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATGTTTTTGGTAAC	NA	False	NA	-24	True	AATAAA	-22	NA	115785708	115782465	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_115782650_115783946_115784129_115784762_115784864_115785658
ENSMUST00000081848.13	chr3	-	1237	10	FSM	ENSMUSG00000059743.13	ENSMUST00000081848.13	1237	10	0	0	0	0	multi-exon	FALSE	canonical	3	1662	junction_9	235.997175124336	9534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89009266	89000894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89009168
ENSMUST00000081849.10	chr6	-	3683	13	FSM	ENSMUSG00000040669.15	ENSMUST00000081849.10	3683	13	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_9	201.860702108052	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTACTGCATTCTGCT	9596	False	NA	-12	True	ATTAAA	-41	NA	122313974	122294689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816
ENSMUST00000081932.13	chr2	+	4461	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	0	0	0	0	multi-exon	TRUE	canonical	3	230	junction_10	26.4695873268632	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAGTGTTTTCTGTAC	987	False	NA	21	True	AATAAA	-21	NA	3285248	3329914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ENSMUST00000081940.11	chr8	-	541	4	FSM	ENSMUSG00000090137.9	ENSMUST00000081940.11	541	4	0	0	0	0	multi-exon	FALSE	canonical	3	1892	junction_3	9741.86690983247	168226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGGTGTCTAGAGTGAC	NA	False	NA	-7	True	AATAAA	-25	NA	70963067	70960915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70961179_70961945_70962033_70962170_70962282_70962987
ENSMUST00000081946.5	chr7	-	1515	11	FSM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	0	0	0	0	multi-exon	FALSE	canonical	3	2125	junction_9	150.487341660354	2123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCGTGTGTGGCTCTGT	2656	False	NA	-1	True	NA	NA	NA	28011497	28004940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ENSMUST00000081956.12	chr6	-	2737	6	FSM	ENSMUSG00000039985.15	ENSMUST00000081956.12	2737	6	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	848.577303490967	3146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148846324	148822554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148846086
ENSMUST00000081980.7	chr11	+	1920	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_1	0	445	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATGGTTTGCCTGTTGGC	NA	False	NA	10	True	ATTAAA	-21	NA	59839031	59853031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_59839305_59851384
ENSMUST00000082034.13	chrX	-	4170	24	FSM	ENSMUSG00000025665.17	ENSMUST00000082034.13	4170	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	80.9832067354516	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTAGTCTTGGTGTAG	NA	False	NA	-7	True	ATTAAA	-30	NA	110396479	110297889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110396365
ENSMUST00000082092.5	chr11	+	345	5	FSM	ENSMUSG00000057322.13	ENSMUST00000082092.5	345	5	0	0	0	0	multi-exon	FALSE	canonical	3	1304	junction_1	7543.63564122102	156135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559451	114563157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_114559512_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ENSMUST00000082094.5	chr6	-	2581	24	FSM	ENSMUSG00000063884.7	ENSMUST00000082094.5	2581	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	208.34992196086	2332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3048	False	NA	-3	True	AATAAA	-26	NA	71885734	71857623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866354_71866577_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ENSMUST00000082120.5	chr8	-	1772	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	0	0	0	0	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	11102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43760017	43748103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
ENSMUST00000082121.9	chr5	-	1945	19	FSM	ENSMUSG00000029276.14	ENSMUST00000082121.9	1945	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	65.6557849603935	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCATTATACTTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	107745754	107696888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745672
ENSMUST00000082136.7	chr12	-	1926	4	FSM	ENSMUSG00000059436.14	ENSMUST00000082136.7	1926	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	8.28653526310404	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGGTAGTAGTGTCTTC	NA	False	NA	-5	True	AATAAA	-15	NA	77008975	76984047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_76985530_76986740_76986865_76999942_77000051_77008763
ENSMUST00000082141.12	chr18	-	2820	9	FSM	ENSMUSG00000063889.17	ENSMUST00000082141.12	2820	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	26.6596019287611	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGTGTGTATGTCT	-20	True	NA	-2	True	TATAAA	-17	NA	3337589	3266355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_3268130_3273421_3273579_3276693_3276730_3287903_3288093_3295039_3295183_3295321_3295417_3325360_3325479_3327493_3327592_3337379
ENSMUST00000082223.13	chr5	+	2045	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	0	0	0	0	multi-exon	FALSE	canonical	3	7026	junction_3	385.215126750691	72235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGGCATTCTTAATT	NA	False	NA	24	True	AATAAA	-18	NA	108048367	108056871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ENSMUST00000082235.5	chr18	+	2286	15	FSM	ENSMUSG00000024313.9	ENSMUST00000082235.5	2286	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.8513502933488	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTGATCTTTCTCCC	NA	False	NA	9	True	AATAAA	-21	NA	21205400	21233256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_21205494_21207978_21207998_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
ENSMUST00000082283.10	chr11	+	533	3	FSM	ENSMUSG00000059278.10	ENSMUST00000082283.10	533	3	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	636	6889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCTGTGTGTAGGT	NA	False	NA	17	True	ATTAAA	-17	NA	69286639	69287506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69286799_69286973_69287187_69287345
ENSMUST00000082319.15	chr18	+	1115	8	FSM	ENSMUSG00000024400.17	ENSMUST00000082319.15	1115	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	160.52299727161	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTAGTTTTTCCCTCT	5647	False	NA	NA	False	AGTAAA	-17	NA	31937142	31974695	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_31974492
ENSMUST00000082320.12	chrX	-	1883	14	FSM	ENSMUSG00000031169.14	ENSMUST00000082320.12	1883	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	23.6039812106789	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCGGTTTTTTGGTTTTT	1964	False	NA	0	True	AATAAA	-19	NA	8072764	8060086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069264_8069283_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
ENSMUST00000082365.6	chr15	-	2383	7	FSM	ENSMUSG00000018865.10	ENSMUST00000082365.6	2383	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	29.8105126870818	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGTCTGTGTGC	NA	False	NA	-1	True	AATAAA	-17	NA	83989955	83960297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83961784_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
ENSMUST00000082429.8	chr9	+	1072	2	FSM	ENSMUSG00000063856.9	ENSMUST00000082429.8	1072	2	0	0	0	0	multi-exon	FALSE	canonical	3	8868	junction_1	0	35556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGTCCTGTGTCA	NA	False	NA	18	True	AATAAA	-18	NA	108216252	108217542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108216758_108216975
ENSMUST00000082430.11	chr11	+	1594	5	FSM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	9.98436277385793	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGCCTACTTGGAATTT	NA	False	NA	9	True	AGTAAA	-16	NA	54793597	54801203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_54793879_54797952_54798107_54799366_54799485_54799865_54799966_54800262
ENSMUST00000082431.6	chr12	-	1010	2	FSM	ENSMUSG00000042808.11	ENSMUST00000082431.6	1010	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGGGTCTCTGTCTTC	NA	False	NA	-5	True	AATAAA	-16	NA	76842273	76839110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_76839775_76841927
ENSMUST00000082437.11	chr3	+	1514	5	FSM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	0	0	0	0	multi-exon	FALSE	canonical	3	1325	junction_1	27.3404462289846	2909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCTTTGTCCTTTCGTG	NA	False	NA	28	True	AATAAA	-30	NA	144276186	144303441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144302583
ENSMUST00000082446.3	chr9	+	203	1	FSM	ENSMUSG00000064380.3	ENSMUST00000082446.3	203	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACTCGGTGGCAAACAGA	NA	False	NA	8	True	NA	NA	NA	119958416	119958619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_119958400_119958600
ENSMUST00000082493.3	chr12	+	136	1	FSM	ENSMUSG00000064427.3	ENSMUST00000082493.3	136	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1910	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAACGAGTTTTACTT	NA	False	NA	NA	False	NA	NA	NA	17596146	17596282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_17596100_17596300
ENSMUST00000082561.3	chr11	-	133	1	FSM	ENSMUSG00000064495.3	ENSMUST00000082561.3	133	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTAGATGTGACGTCT	NA	False	NA	NA	False	GATAAA	-18	NA	6569940	6569807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6569800_6569900
ENSMUST00000082579.3	chr11	-	133	1	FSM	ENSMUSG00000064513.3	ENSMUST00000082579.3	133	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	539	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGACACCTGCCACGTG	NA	False	NA	-6	True	NA	NA	NA	6478165	6478032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6478000_6478200
ENSMUST00000082580.3	chr9	+	71	1	FSM	ENSMUSG00000064514.3	ENSMUST00000082580.3	71	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGAGTGAGCTACGCCA	NA	False	NA	NA	False	NA	NA	NA	64084404	64084475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_64084400_64084500
ENSMUST00000082608.3	chr4	-	70	1	FSM	ENSMUSG00000064542.3	ENSMUST00000082608.3	70	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGGCCTTCAACGCCTG	NA	False	NA	NA	False	NA	NA	NA	117011359	117011289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117011300_117011400
ENSMUST00000082666.3	chr7	+	133	1	FSM	ENSMUSG00000064600.3	ENSMUST00000082666.3	133	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	454	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAAATAG	NA	False	NA	NA	False	NA	NA	NA	109622416	109622549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_109622400_109622500
ENSMUST00000082670.3	chr4	+	129	1	FSM	ENSMUSG00000064604.3	ENSMUST00000082670.3	129	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	551	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATCAGGCCTCAAGTTG	NA	False	NA	NA	False	NA	NA	NA	132037251	132037380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132037300_132037400
ENSMUST00000082882.3	chr1	+	83	1	FSM	ENSMUSG00000064816.3	ENSMUST00000082882.3	83	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAATAATGATTTGGGG	NA	False	NA	NA	False	TTTAAA	-24	NA	160863626	160863709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160863600_160863700
ENSMUST00000082967.3	chr11	-	137	1	FSM	ENSMUSG00000064901.3	ENSMUST00000082967.3	137	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	580	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTCTGAAAGATTACTTA	NA	False	NA	-3	True	NA	NA	NA	97672601	97672464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97672500_97672600
ENSMUST00000082991.3	chr9	+	149	1	FSM	ENSMUSG00000064925.3	ENSMUST00000082991.3	149	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGCATGAACTGAGCCT	NA	False	NA	NA	False	NA	NA	NA	119959480	119959629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_119959500_119959600
ENSMUST00000083018.3	chr3	-	85	1	FSM	ENSMUSG00000064952.3	ENSMUST00000083018.3	85	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCGAGAAAAAAAAACAAAAA	5392	False	NA	NA	False	AAAACA	-30	NA	94998020	94997935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_94997900_94998000
ENSMUST00000083102.3	chr6	-	134	1	FSM	ENSMUSG00000065036.3	ENSMUST00000083102.3	134	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTTGTCTCTAATCTC	7991	False	NA	NA	False	GATAAA	-2	NA	131357369	131357235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_131357200_131357400
ENSMUST00000083213.3	chr14	+	130	1	FSM	ENSMUSG00000065147.3	ENSMUST00000083213.3	130	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGCTAGGACAGTTATAA	944	False	NA	NA	False	NA	NA	NA	76085344	76085474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_76085300_76085500
ENSMUST00000083274.3	chr16	+	139	1	FSM	ENSMUSG00000065208.3	ENSMUST00000083274.3	139	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2469	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCGGGGATGTCTAGCT	721	False	NA	-1	True	NA	NA	NA	22930366	22930505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22930400_22930500
ENSMUST00000083285.3	chr7	-	83	1	FSM	ENSMUSG00000065219.3	ENSMUST00000083285.3	83	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCCCTGCTTTCTTGGG	NA	False	NA	NA	False	NA	NA	NA	44776888	44776805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44776800_44776900
ENSMUST00000083325.3	chr7	+	130	1	FSM	ENSMUSG00000065259.3	ENSMUST00000083325.3	130	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1399	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTTCTGATCTACATG	NA	False	NA	24	True	NA	NA	NA	127127045	127127175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127127000_127127200
ENSMUST00000083339.3	chr17	+	76	1	FSM	ENSMUSG00000065273.3	ENSMUST00000083339.3	76	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCCTCCTTCTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	35466150	35466226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35466200_35466200
ENSMUST00000083353.3	chr2	+	133	1	FSM	ENSMUSG00000065287.3	ENSMUST00000083353.3	133	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1854	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGAGAGCTTGGGACC	NA	False	NA	NA	False	NA	NA	NA	130118156	130118289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_130118200_130118300
ENSMUST00000083419.3	chr4	-	205	1	FSM	ENSMUSG00000065353.3	ENSMUST00000083419.3	205	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1846	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAATTCCTAAGGCTTT	NA	False	NA	NA	False	NA	NA	NA	132079837	132079632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132079600_132079800
ENSMUST00000083804.3	chr3	-	81	1	FSM	ENSMUSG00000065738.3	ENSMUST00000083804.3	81	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGTTTTACCTAAACT	7419	False	NA	NA	False	NA	NA	NA	153617327	153617246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_153617200_153617300
ENSMUST00000083839.3	chr3	+	166	1	FSM	ENSMUSG00000119774.1	ENSMUST00000083839.3	166	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	501	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACTGGTAACCAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	96357761	96357927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96357800_96357900
ENSMUST00000083884.3	chr7	-	90	1	FSM	ENSMUSG00000065818.3	ENSMUST00000083884.3	90	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	436	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCCGTGCTGGGGATGA	NA	False	NA	NA	False	NA	NA	NA	44775859	44775769	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44775800_44775900
ENSMUST00000084124.7	chr4	-	2218	13	FSM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	0	0	0	0	multi-exon	FALSE	canonical	1	98	junction_7	73.9915066447194	1817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTCTTTGTTTCTTCTCC	NA	False	NA	-8	True	AATAAA	-16	NA	149251164	149234447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
ENSMUST00000084141.6	chr17	-	3686	5	FSM	ENSMUSG00000069743.6	ENSMUST00000084141.6	3686	5	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_3	11.3880419739304	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTCGAACTTGGTTGT	NA	False	NA	-12	True	NA	NA	NA	22064740	22035865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_22039170_22040050_22040178_22042824_22042873_22059604_22059696_22064624
ENSMUST00000084149.10	chr4	+	2813	7	FSM	ENSMUSG00000067916.10	ENSMUST00000084149.10	2813	7	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	76.9805170156709	3472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTCAAATGAGCCAAT	NA	False	NA	NA	False	AATAAA	-20	NA	147216494	147265036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_147216647_147219028_147219122_147224494_147224577_147249797_147249844_147260303_147260362_147261203_147261331_147262781
ENSMUST00000084184.7	chr4	+	1780	6	FSM	ENSMUSG00000066026.15	ENSMUST00000084184.7	1780	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	68.7185564458393	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCCTTCGTTCACGT	6088	False	NA	6	True	AATAAA	-13	NA	144619788	144654209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_144620280_144645220_144645365_144645799_144646075_144646410_144646650_144650475_144650602_144653704
ENSMUST00000084219.12	chr4	+	2647	10	FSM	ENSMUSG00000066037.15	ENSMUST00000084219.12	2647	10	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	166.354225660371	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTGATTGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	136038335	136068174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_136038401_136043671_136043796_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUST00000084250.11	chr4	-	2285	10	FSM	ENSMUSG00000028896.14	ENSMUST00000084250.11	2285	10	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_9	35.0019399815087	1802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTATGCGTGTCC	5439	False	NA	-10	True	AATAAA	-21	NA	132073058	132059229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132072956
ENSMUST00000084296.10	chr4	-	1626	10	FSM	ENSMUSG00000028873.17	ENSMUST00000084296.10	1626	10	0	0	0	0	multi-exon	FALSE	canonical	3	1430	junction_6	123.940846105444	4921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCGGTCATCTGCATT	NA	False	NA	-10	True	AATAAA	-26	NA	124830710	124812257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ENSMUST00000084319.11	chr4	+	1134	7	FSM	ENSMUSG00000006392.17	ENSMUST00000084319.11	1134	7	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_2	198.998673920763	2178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	32	True	NA	NA	NA	118266533	118272308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_118266584_118268081_118268201_118268894_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ENSMUST00000084383.10	chrX	+	3172	23	FSM	ENSMUSG00000031060.17	ENSMUST00000084383.10	3172	23	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_9	72.7799809002085	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTCATGTCCTAGTAT	555	False	NA	41	True	AATAAA	-29	NA	20484021	20517140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ENSMUST00000084418.4	chr7	-	1490	5	FSM	ENSMUSG00000025147.8	ENSMUST00000084418.4	1490	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	10.8857705285386	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCCTCTCAGCCTG	NA	False	NA	-34	True	AATAAA	-18	NA	141614802	141562286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570081_141570243_141614721
ENSMUST00000084497.12	chr7	+	2892	9	FSM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_8	19.6273883896967	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATATTTTAGTGTCTGT	NA	False	NA	16	True	AATAAA	-18	NA	132460953	132486840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
ENSMUST00000084500.8	chr7	-	2152	10	FSM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_6	42.9636653837854	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGATGTGAATCTATTTA	NA	False	NA	-5	True	AATAAA	-24	NA	132178127	132159206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
ENSMUST00000084502.7	chr7	+	2218	8	FSM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	0	0	0	0	multi-exon	FALSE	canonical	3	1325	junction_6	52.1422700554033	5316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCAGGTGTGTTACCT	NA	False	NA	8	True	ATTAAA	-17	NA	131161950	131173621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ENSMUST00000084519.7	chr7	+	4550	29	FSM	ENSMUSG00000042055.14	ENSMUST00000084519.7	4550	29	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_20	18.5519128228804	319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTTGAGTCTCTT	NA	False	NA	6	True	AATAAA	-19	NA	129193586	129237462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235454_129236541
ENSMUST00000084525.12	chr4	-	819	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	1298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGACGTCCTTAAAGGT	2664	False	NA	NA	False	AATAAA	-18	NA	62326879	62312819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
ENSMUST00000084526.12	chr4	+	3718	5	FSM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_3	40.1932830209228	1809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTCTGTCTACACACT	NA	False	NA	23	True	AATAAA	-23	NA	62278963	62310006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834
ENSMUST00000084527.10	chr4	-	4264	28	FSM	ENSMUSG00000066151.13	ENSMUST00000084527.10	4264	28	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_18	17.8933741789013	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTGTTCCTTTTTGGG	6994	False	NA	-1	True	NA	NA	NA	62278707	62218578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ENSMUST00000084530.9	chr4	+	1820	4	FSM	ENSMUSG00000066152.12	ENSMUST00000084530.9	1820	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	15.369522511198	363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	NA	False	NA	9	True	AATAAA	-20	NA	62204685	62216648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_62204812_62210868_62210936_62214123_62214314_62215211
ENSMUST00000084586.9	chr7	-	2062	5	FSM	ENSMUSG00000059772.13	ENSMUST00000084586.9	2062	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	7.44983221287567	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAAAGTTCTAGCCG	5132	False	NA	NA	False	NA	NA	NA	126294811	126289849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126290828_126290910_126290996_126291099_126291832_126291924_126291977_126294596
ENSMUST00000084721.8	chr13	+	1222	3	FSM	ENSMUSG00000078941.10	ENSMUST00000084721.8	1222	3	0	0	0	0	multi-exon	FALSE	canonical	3	1279	junction_2	251.5	3791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGTACTTTGGCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	100787850	100792567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_100787954_100790698_100790792_100791541
ENSMUST00000084727.11	chr7	+	3003	16	FSM	ENSMUSG00000061079.15	ENSMUST00000084727.11	3003	16	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	55.3423285861133	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATACTTTTTGTTTG	NA	False	NA	12	True	AATACA	-10	NA	109660916	109694594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ENSMUST00000084731.5	chr7	+	4763	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	1668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7198	False	NA	NA	False	AAGAAA	-2	NA	109617480	109655816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ENSMUST00000084771.3	chr10	+	1559	7	FSM	ENSMUSG00000071072.13	ENSMUST00000084771.3	1559	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	1337.80347543609	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAAGATTTCTTGG	903	False	NA	-1	True	TTTAAA	-22	NA	127894879	127912847	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127910090_127910154_127911206_127911232_127911935
ENSMUST00000084828.5	chr12	+	4684	29	FSM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	40.0130559050061	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCTTGTTTAAAAGTGAC	NA	False	NA	NA	False	TATAAA	-30	NA	116369021	116425231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ENSMUST00000084846.12	chr4	-	3740	18	FSM	ENSMUSG00000028809.17	ENSMUST00000084846.12	3740	18	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_11	319.821966045795	2680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080555	135047801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ENSMUST00000084867.9	chr9	-	874	4	FSM	ENSMUSG00000032436.18	ENSMUST00000084867.9	874	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	609.72343457232	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTTTCCTTATTGCATG	NA	False	NA	-17	True	AATAAA	-13	NA	114610900	114585906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_114586360_114587872_114587955_114592286_114592461_114610735
ENSMUST00000084937.11	chr7	+	2092	7	FSM	ENSMUSG00000045411.17	ENSMUST00000084937.11	2092	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	279.849612391291	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43896248_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000084947.10	chr12	+	2433	3	FSM	ENSMUSG00000060950.13	ENSMUST00000084947.10	2433	3	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_2	1	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	5	True	AATAAA	-17	NA	111644538	111650336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_111645397_111647235_111647503_111649028
ENSMUST00000085017.5	chr7	+	1494	8	FSM	ENSMUSG00000030613.14	ENSMUST00000085017.5	1494	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	63.9607660354122	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTGTAAATGTGTTAT	NA	False	NA	10	True	AATAAA	-18	NA	92210356	92231502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
ENSMUST00000085018.6	chr9	+	1846	6	FSM	ENSMUSG00000032599.13	ENSMUST00000085018.6	1846	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	11.6516093309036	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGCTGTCGTTCTTTCT	NA	False	NA	19	True	AATACA	-23	NA	108673192	108683536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108673596_108675308_108675378_108675469_108675693_108676440_108676617_108681740_108681917_108682737
ENSMUST00000085065.12	chr12	+	977	7	FSM	ENSMUSG00000064215.14	ENSMUST00000085065.12	977	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	6.23832242407097	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCATTGTTCCCCTTTC	6634	False	NA	5	True	AATAAA	-19	NA	103400517	103406498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_103400610_103401680_103401833_103402821_103402942_103403648_103403784_103403934_103403965_103405659_103405822_103406212
ENSMUST00000085192.7	chr12	-	3399	12	FSM	ENSMUSG00000021238.12	ENSMUST00000085192.7	3399	12	0	0	0	0	multi-exon	FALSE	canonical	2	131	junction_11	16.2917613413438	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTTTTCCTTCTTTTG	NA	False	NA	NA	False	AATAAA	-33	NA	84497777	84477490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ENSMUST00000085248.12	chr9	-	1882	13	FSM	ENSMUSG00000062270.15	ENSMUST00000085248.12	1882	13	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_10	2408.59367105002	11128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGCCGTGTTATCAA	NA	False	NA	NA	False	AATAAA	-24	NA	89996768	89973717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707_89985825_89989287_89989356_89992178_89992226_89996588
ENSMUST00000085255.11	chr7	+	4195	31	FSM	ENSMUSG00000030447.16	ENSMUST00000085255.11	4195	31	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_15	147.013453654948	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTACCAGTTTCTTTTAA	NA	False	NA	5	True	NA	NA	NA	55491953	55580246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547572_55547721_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUST00000085256.8	chr9	+	816	3	FSM	ENSMUSG00000066442.18	ENSMUST00000085256.8	816	3	0	0	0	0	multi-exon	TRUE	canonical	3	175	junction_1	109	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTAGAATATTAATGCAA	NA	False	NA	NA	False	AATAAA	-35	NA	89093209	89122293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_89093365_89097261_89097524_89121894
ENSMUST00000085272.7	chr7	+	1418	6	FSM	ENSMUSG00000039745.9	ENSMUST00000085272.7	1418	6	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	99.2685247195706	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAATGGAGAAA	9894	False	NA	-5	True	NA	NA	NA	49408876	49423723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_49409060_49409289_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ENSMUST00000085350.11	chr9	+	2969	9	FSM	ENSMUSG00000034563.17	ENSMUST00000085350.11	2969	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	47.1963981676568	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTCTCAAGTCTGGCG	NA	False	NA	NA	False	AATAAA	-23	NA	72892886	72923282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920609_72922613
ENSMUST00000085365.6	chr7	-	801	1	FSM	ENSMUSG00000062758.7	ENSMUST00000085365.6	801	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39423	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACACTGAATTTTCTGT	NA	False	NA	NA	False	AAAAAG	-36	NA	131216717	131215916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_131215900_131216700
ENSMUST00000085375.13	chr7	+	1185	10	FSM	ENSMUSG00000003423.16	ENSMUST00000085375.13	1185	10	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	85.8518678298646	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCAGACAATGATGCAT	NA	False	NA	20	True	AATAAA	-20	NA	44803737	44809488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44803965_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ENSMUST00000085393.13	chr9	+	2328	10	FSM	ENSMUSG00000011958.18	ENSMUST00000085393.13	2328	10	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_9	27.3933397330153	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	False	NA	17	True	AATAAA	-17	NA	69896785	69915537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
ENSMUST00000085519.13	chr9	-	2113	7	Antisense	novelGene_ENSMUSG00000032249.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3795	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCTCCTTGCGTGGAGC	NA	False	NA	NA	False	NA	NA	NA	62286094	62248610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr9_-_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
ENSMUST00000085554.5	chr5	+	1009	4	FSM	ENSMUSG00000029651.17	ENSMUST00000085554.5	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	28.87136220471	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGAATTATTGGGAAATG	NA	False	NA	NA	False	NA	NA	NA	148239983	148250810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_148240080_148240292_148240413_148243439_148243538_148250115
ENSMUST00000085556.4	chr7	+	3046	16	FSM	ENSMUSG00000030494.14	ENSMUST00000085556.4	3046	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_15	29.2524642836577	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTCTTTTTTCTTTTG	NA	False	NA	22	True	AATAAA	-22	NA	35033754	35091710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179_35090736_35091033
ENSMUST00000085633.12	chr1	-	1089	9	FSM	ENSMUSG00000026632.18	ENSMUST00000085633.12	1089	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.3860935302276	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTAAAAAAGGAATGAT	NA	False	NA	0	True	TATAAA	-20	NA	190795101	190778034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_190778518_190781478_190781560_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
ENSMUST00000085671.10	chr5	+	3794	6	FSM	ENSMUSG00000055991.16	ENSMUST00000085671.10	3794	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	9.08625335328044	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACTTGAGGTTTCTCTC	937	False	NA	10	True	ATTAAA	-15	NA	145141371	145158560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145142519_145144385_145144519_145148555_145148639_145149314_145149451_145155096_145155694_145156862
ENSMUST00000085673.11	chr9	-	4481	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_4	53.0057485090061	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGATTGCAATCTCTA	2151	False	NA	-1	True	AGTAAA	-23	NA	58157069	58125358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ENSMUST00000085679.13	chr5	+	3105	10	FSM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	0	0	0	0	multi-exon	FALSE	canonical	3	1600	junction_4	137.116333413962	7315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCATGTCTTGTCTGGGT	8032	False	NA	NA	False	AATATA	-15	NA	145051024	145066509	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUST00000085720.3	chr12	+	315	1	FSM	ENSMUSG00000066629.3	ENSMUST00000085720.3	315	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10377	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGAACCCTCCCCCAATA	NA	False	NA	NA	False	NA	NA	NA	12962022	12962337	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_12962000_12962300
ENSMUST00000085724.5	chr1	+	2983	8	FSM	ENSMUSG00000038576.16	ENSMUST00000085724.5	2983	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	5.19418827505653	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAGTTTGAAGTGTGACT	NA	False	NA	NA	False	ATTAAA	-16	NA	182592459	182724156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_182592754_182660627_182660841_182681521_182681696_182685986_182686176_182714904_182715097_182716332_182716478_182719447_182719831_182722763
ENSMUST00000085792.5	chr7	-	2764	5	FSM	ENSMUSG00000050855.17	ENSMUST00000085792.5	2764	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	10.6624340560681	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTGACTTTGTGGTG	3444	False	NA	-4	True	AATAAA	-21	NA	29553073	29543360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552921
ENSMUST00000085797.6	chr1	+	2473	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	0	0	0	0	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGAGCGAGTCATCGA	NA	False	NA	21	True	AATAAA	-19	NA	180720672	180726668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
ENSMUST00000085835.8	chr7	+	2724	32	FSM	ENSMUSG00000037337.12	ENSMUST00000085835.8	2724	32	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_17	22.4346431975332	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCGGAGGAGAGATTTT	NA	False	NA	22	True	AATAAA	-27	NA	28682252	28702703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ENSMUST00000085851.12	chr7	-	1243	6	FSM	ENSMUSG00000030595.16	ENSMUST00000085851.12	1243	6	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_1	23.6761483354029	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTTCCTGCTTATTT	NA	False	NA	1	True	AATAAA	-33	NA	28465939	28458456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461361_28461450_28461557_28465668
ENSMUST00000085894.12	chr1	+	1908	12	FSM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	6.26415751889171	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGCTCCACTTCACTGC	5422	False	NA	6	True	ATTAAA	-19	NA	172348610	172373437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_172348749_172355356_172355483_172357376_172357520_172359647_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751_172368946_172372658_172372884_172373241
ENSMUST00000085912.10	chr1	+	2182	8	FSM	ENSMUSG00000038034.16	ENSMUST00000085912.10	2182	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	261.703446438046	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTTGTGTCTTCTCTT	3147	False	NA	19	True	AATAAA	-19	NA	172139337	172147408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_172139366_172140057_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ENSMUST00000085941.12	chr5	-	740	5	FSM	ENSMUSG00000059518.15	ENSMUST00000085941.12	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	104.169033306449	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTCATTCTGGGGTAT	NA	False	NA	6	True	AATAAA	-22	NA	137015755	137011043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137015664
ENSMUST00000085953.5	chr7	+	2387	6	FSM	ENSMUSG00000057229.12	ENSMUST00000085953.5	2387	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	50.2330568450697	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCCTGTGGCCTTTCCTC	1818	False	NA	36	True	NA	NA	NA	25318917	25324973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_25319890_25320320_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
ENSMUST00000086058.13	chr19	+	1388	11	FSM	ENSMUSG00000071657.13	ENSMUST00000086058.13	1388	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	60.1671837466239	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTGTGTGGACATCC	NA	False	NA	13	True	AATAAA	-13	NA	8817882	8826030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8817933_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ENSMUST00000086075.13	chr5	-	2521	13	FSM	ENSMUSG00000037936.16	ENSMUST00000086075.13	2521	13	0	0	0	0	multi-exon	TRUE	canonical	3	188	junction_1	171.680966232913	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTTCTGTGACTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	125418158	125354150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_125354930_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ENSMUST00000086112.8	chr7	+	836	5	FSM	ENSMUSG00000008036.12	ENSMUST00000086112.8	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_2	14.0423466699836	1037	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTCTGAGCCCTCAT	NA	False	NA	19	True	AATAAA	-19	NA	16472334	16483219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_16472464_16477143_16477294_16481185_16481300_16482613_16482674_16482836
ENSMUST00000086167.12	chr9	+	5161	26	FSM	ENSMUSG00000042185.15	ENSMUST00000086167.12	5161	26	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	11.7439346047226	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31297487	31332629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308331_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ENSMUST00000086199.12	chr1	+	2792	7	FSM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	27.7213315376845	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTATTTCATTCCTTCTT	NA	False	NA	87	True	NA	NA	NA	153775689	153785469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_153775806_153778679_153778859_153780282_153780445_153782094_153782242_153782765_153782894_153783031_153783232_153783609
ENSMUST00000086216.9	chr5	-	2760	17	FSM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	0	0	0	0	multi-exon	TRUE	canonical	3	1165	junction_8	284.126264845403	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCATCCTCTTAAATC	NA	False	NA	NA	False	AATAAA	-2	NA	122959402	122925521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUST00000086247.6	chr5	+	712	4	FSM	ENSMUSG00000029468.18	ENSMUST00000086247.6	712	4	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	10.4029910228848	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCCAGAATTGGTTTAT	NA	False	NA	NA	False	NA	NA	NA	122782071	122793325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_122782262_122790789_122790959_122792223_122792293_122793041
ENSMUST00000086248.7	chr7	+	1154	7	FSM	ENSMUSG00000070837.7	ENSMUST00000086248.8	1154	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	169.856802434678	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2794	False	NA	20	True	ATTAAA	-21	NA	6998381	7006090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_6998548_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ENSMUST00000086278.7	chr9	-	3238	8	FSM	ENSMUSG00000066829.8	ENSMUST00000086278.7	3238	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	8.19407451411428	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGTGTAAATTAAGCATT	NA	False	NA	-8	True	AATAAA	-17	NA	22218934	22188043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22218844
ENSMUST00000086327.12	chr7	+	3672	5	FSM	ENSMUSG00000054893.16	ENSMUST00000086327.12	3672	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	11.1214882097676	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAACTGGAGGTGTCCC	2972	False	NA	NA	False	NA	NA	NA	6289577	6310882	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_6289654_6292356_6292437_6293534_6293662_6296847_6296941_6307586
ENSMUST00000086349.5	chr7	+	1142	2	FSM	ENSMUSG00000051184.8	ENSMUST00000086349.5	1142	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCACTGTGTGTTCAGTC	2940	False	NA	5	True	AATAAA	-15	NA	5018468	5021486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_5018560_5020435
ENSMUST00000086370.11	chr2	-	812	3	FSM	ENSMUSG00000026831.17	ENSMUST00000086370.11	812	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	7	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCCACGCCTCTTATT	NA	False	NA	0	True	ATTAAA	-19	NA	28356344	28352012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_28352447_28355148_28355228_28356045
ENSMUST00000086374.8	chr9	-	1264	3	FSM	ENSMUSG00000096472.3	ENSMUST00000086374.8	1264	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.5	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGTTTTGTGTGA	NA	False	NA	NA	False	TATAAA	-18	NA	21202449	21199761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21200629_21201720_21201773_21202104
ENSMUST00000086399.6	chr9	+	2535	7	FSM	ENSMUSG00000037405.9	ENSMUST00000086399.6	2535	7	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_3	34.8456915876586	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGAGTTTGTGTACAG	NA	False	NA	16	True	AATAAA	-21	NA	20927280	20940113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938977_20939066
ENSMUST00000086458.10	chr9	-	2056	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086458.10	2056	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	23	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	False	NA	-4	True	ATTAAA	-18	NA	20556063	20549084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20550495_20553319_20553393_20555490
ENSMUST00000086519.12	chr5	+	1358	7	FSM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	0	0	0	0	multi-exon	FALSE	canonical	3	6763	junction_6	6310.78692266926	173073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCAAGCCTGGCCTTT	NA	False	NA	3	True	ATTAAA	-14	NA	115697525	115701786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ENSMUST00000086535.12	chr1	+	1049	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	0	0	0	0	multi-exon	FALSE	canonical	3	7651	junction_1	2133.80345568658	133115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGGTTTGAACATGTTT	NA	False	NA	10	True	ATTAAA	-23	NA	39406922	39410992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ENSMUST00000086559.7	chr1	+	4697	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_4	13.4402380931292	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTATCCCTGTGTGTCT	5202	False	NA	23	True	AATAAA	-20	NA	131755714	131776603	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ENSMUST00000086564.11	chr5	-	2984	20	FSM	ENSMUSG00000041890.18	ENSMUST00000086564.11	2984	20	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_12	54.5305322490843	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911523	114867635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ENSMUST00000086596.2	chr1	-	378	1	FSM	ENSMUSG00000094122.2	ENSMUST00000086596.2	378	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1602	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTACTCATGTCAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	129729501	129729123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_129729100_129729500
ENSMUST00000086614.12	chr1	-	4210	21	FSM	ENSMUSG00000036086.17	ENSMUST00000086614.12	4210	21	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_3	27.0654761642946	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAATTATGGGTACGT	NA	False	NA	-5	True	AATAAA	-22	NA	128030199	127881920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029989
ENSMUST00000086635.9	chr5	+	2761	12	FSM	ENSMUSG00000050017.12	ENSMUST00000086635.9	2761	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	273.518821024341	1729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478628	111536225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111494985_111494994_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ENSMUST00000086643.12	chr5	-	1868	7	FSM	ENSMUSG00000029507.17	ENSMUST00000086643.12	1868	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	212.004454879818	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCCTATTTTCCTTT	NA	False	NA	1	True	ATTAAA	-22	NA	110928462	110921532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110924419_110924474_110925479_110925618_110927552_110927764_110928105
ENSMUST00000086764.7	chr19	+	396	1	FSM	ENSMUSG00000067038.7	ENSMUST00000086764.7	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3096	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAATTTTGGCTGAAA	NA	False	NA	NA	False	AAGAAA	-1	NA	59310802	59311198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_59310800_59311200
ENSMUST00000086801.7	chr17	-	3283	17	FSM	ENSMUSG00000024206.16	ENSMUST00000086801.7	3283	17	0	0	0	0	multi-exon	TRUE	canonical	3	178	junction_12	29.2883695986991	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCCGTGTTTGTTC	NA	False	NA	-1	True	NA	NA	NA	57138013	57082896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ENSMUST00000086833.13	chr5	+	1411	8	FSM	ENSMUSG00000029304.15	ENSMUST00000086833.13	1411	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2820.707358093	14923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582983	104588914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104584766_104584770_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUST00000086851.2	chr1	-	1335	4	FSM	ENSMUSG00000067071.9	ENSMUST00000086851.2	1335	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	18.4932420089069	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTGTCCAATGTGTG	NA	False	NA	-1	True	AATAAA	-35	NA	91340944	91339204	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_91340205_91340442_91340525_91340614_91340702_91340778
ENSMUST00000086869.6	chr17	+	1660	8	FSM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_5	8.99205998963212	411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGTGTTGGAGTCTGCT	344	False	NA	8	True	NA	NA	NA	56266173	56275285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
ENSMUST00000086969.13	chr19	+	2278	9	FSM	ENSMUSG00000025227.15	ENSMUST00000086969.13	2278	9	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	30.2561977122044	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4198	False	NA	13	True	AGTAAA	-13	NA	46345318	46363691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ENSMUST00000087026.13	chr17	-	1314	9	FSM	ENSMUSG00000067148.16	ENSMUST00000087026.13	1314	9	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_8	54.719597723302	4496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTTTTTTTTGTCTA	NA	False	NA	2	True	AATAAA	-25	NA	46558980	46554845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46555147_46555231_46555349_46555451_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
ENSMUST00000087031.7	chr17	+	5081	32	FSM	ENSMUSG00000067150.7	ENSMUST00000087031.7	5081	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	77.9414252168146	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCCCTATTTTCCTTT	NA	False	NA	14	True	AGTAAA	-16	NA	46513707	46554524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546928_46547838_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ENSMUST00000087181.12	chr5	+	4117	12	FSM	ENSMUSG00000051674.16	ENSMUST00000087181.12	4117	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	58.0571106684922	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGGGTCTTTGTACTC	6007	False	NA	19	True	AATAAA	-30	NA	73638342	73718137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_73638438_73638550_73638612_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ENSMUST00000087215.7	chr1	+	3268	8	FSM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_5	46.4318680148337	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTGTTTTTAAAT	860	False	NA	38	True	AATAAA	-23	NA	74545216	74570001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ENSMUST00000087225.6	chr1	+	2859	9	FSM	ENSMUSG00000026179.15	ENSMUST00000087225.6	2859	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	11.428445869846	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGTCTGAGCTCTCAAT	9363	False	NA	5	True	NA	NA	NA	74371768	74392845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_74371951_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
ENSMUST00000087342.13	chr17	-	392	4	FSM	ENSMUSG00000067288.14	ENSMUST00000087342.13	392	4	0	0	0	0	multi-exon	FALSE	canonical	3	4589	junction_1	7337.59253585413	232738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCCAGCAGCGTC	NA	False	NA	-11	True	AATAAA	-28	NA	34043536	34042009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34042091_34042170_34042305_34043272_34043321_34043407
ENSMUST00000087351.9	chr15	+	1737	10	FSM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	0	0	0	0	multi-exon	FALSE	canonical	3	9291	junction_7	1545.88284736515	33372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148880	103153382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ENSMUST00000087360.9	chr5	+	5252	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTAGATGTCTTCTGT	NA	False	NA	12	True	AATAAA	-18	NA	53713175	53814700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUST00000087441.11	chr5	-	3664	27	FSM	ENSMUSG00000029086.16	ENSMUST00000087441.11	3664	27	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	5.3433861125628	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGGTGTTTGGTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	44259023	44150963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258989
ENSMUST00000087445.7	chr6	+	1775	5	FSM	ENSMUSG00000067338.7	ENSMUST00000087445.7	1775	5	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_3	43.6312674580971	3786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCTTCCCTGTGTGCT	NA	False	NA	16	True	AATAAA	-36	NA	145561482	145567205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_145561816_145563958_145564182_145564457_145564607_145564908_145565590_145566816
ENSMUST00000087475.11	chr1	-	1823	13	FSM	ENSMUSG00000038079.15	ENSMUST00000087475.11	1823	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	58.3887237020604	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAAGCTTTATTAACTG	4340	False	NA	-17	True	AATAAA	-17	NA	59158965	59139755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59156489_59156501_59157133_59157166_59158861
ENSMUST00000087511.10	chr5	+	1291	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_4	19.5751756058534	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTAATGCAAATTTGG	NA	False	NA	NA	False	AATAAA	-25	NA	38417528	38426978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
ENSMUST00000087556.7	chr19	-	5683	25	FSM	ENSMUSG00000024943.10	ENSMUST00000087556.7	5683	25	0	0	0	0	multi-exon	FALSE	canonical	2	93	junction_7	95.2415696910872	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTATTTAAGATGAGAGTA	NA	False	NA	-11	True	AATAAA	-23	NA	23251182	23183814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ENSMUST00000087557.12	chrX	-	1765	8	FSM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	4.33777898591114	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCGTTTTAATTTTTAGA	NA	False	NA	4	True	AATAAA	-42	NA	132799178	132791816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_132792673_132793410_132793516_132795247_132795332_132795676_132795812_132796183_132796283_132797431_132797507_132797872_132798062_132798956
ENSMUST00000087559.8	chr17	+	1191	5	FSM	ENSMUSG00000002308.17	ENSMUST00000087559.8	1191	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	143.673240375513	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGCCTCTAGCCTGT	7328	False	NA	21	True	ATTAAA	-14	NA	34062399	34067725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34062606_34064989_34065116_34066468_34066700_34066990_34067153_34067259
ENSMUST00000087566.11	chr7	-	1549	10	FSM	ENSMUSG00000030695.17	ENSMUST00000087566.11	1549	10	0	0	0	0	multi-exon	FALSE	canonical	3	862	junction_9	8041.23258932084	3763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTTGTTCATGTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	126398313	126394407	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126397145_126397299_126398216
ENSMUST00000087582.13	chr17	-	2370	17	FSM	ENSMUSG00000059208.16	ENSMUST00000087582.13	2370	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	626.847466369411	2676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5740	False	NA	-8	True	AATAAA	-13	NA	33904393	33865212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33888142_33888151_33889054_33889108_33896247_33896415_33904240
ENSMUST00000087585.10	chr1	-	882	10	FSM	ENSMUSG00000025977.16	ENSMUST00000087585.10	882	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	6.71831842570265	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCTGGTTTTCTTCC	NA	False	NA	NA	False	ATTAAA	-19	NA	55402478	55339227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_55339345_55343656_55343786_55344834_55344883_55362808_55362881_55379631_55379760_55385535_55385612_55388039_55388095_55394806_55394899_55399774_55399919_55402457
ENSMUST00000087654.5	chr17	-	3407	4	FSM	ENSMUSG00000067430.8	ENSMUST00000087654.5	3407	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	5.73488351136175	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGTTCAAATGAGATTT	2759	False	NA	-16	True	NA	NA	NA	33252376	33235836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33238944_33240431_33240484_33240679_33240807_33252255
ENSMUST00000087675.9	chr6	+	1729	9	FSM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_6	37.3511629671688	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTGTTTATTTTC	NA	False	NA	20	True	AATACA	-20	NA	137731555	137814892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ENSMUST00000087737.10	chr5	-	1987	6	FSM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	11.160645142643	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGAGCTGGGCTGGA	NA	False	NA	-10	True	AATAAA	-19	NA	34671335	34653430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670962
ENSMUST00000087896.11	chrX	-	1255	8	FSM	ENSMUSG00000067561.13	ENSMUST00000087896.11	1255	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	63.8378046781251	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTGCCCAGGTCTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	101896962	101891244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101896936
ENSMUST00000087916.11	chrX	-	1936	11	FSM	ENSMUSG00000067567.13	ENSMUST00000087916.11	1936	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	12.0747670784989	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCGTCCCACCGCTCTGT	NA	False	NA	-1	True	AATAAA	-15	NA	101548965	101328244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_101328775_101351244_101351351_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ENSMUST00000087933.10	chr1	+	4649	30	FSM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_23	82.0288369004111	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTATAAATAAAAGTAAATA	3304	False	NA	-21	True	NA	NA	NA	43973166	44042131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ENSMUST00000087951.7	chr19	+	2686	5	FSM	ENSMUSG00000048832.10	ENSMUST00000087951.7	2686	5	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_1	17.2699160391705	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTCCATGATGAG	NA	False	NA	16	True	AATAAA	-19	NA	10666114	10691990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10666344_10683573_10683673_10687633_10687806_10688634_10688718_10689887
ENSMUST00000087971.11	chr2	-	2438	6	FSM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_1	95.1075181045116	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTATTGTATAGTTT	NA	False	NA	0	True	AATAAA	-29	NA	168797192	168767280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ENSMUST00000088092.6	chr19	-	1585	3	FSM	ENSMUSG00000071660.11	ENSMUST00000088092.6	1585	3	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_2	7	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTGTGGTGGCGCAC	1924	False	NA	NA	False	ATTAAA	-12	NA	8796658	8788659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8789203_8793217_8793401_8795799
ENSMUST00000088169.7	chr19	-	2762	7	FSM	ENSMUSG00000024758.16	ENSMUST00000088169.7	2762	7	0	0	0	0	multi-exon	FALSE	canonical	3	635	junction_1	35.2735343029618	858	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCAGTCTGCAACTTTAT	9039	False	NA	-18	True	AATAAA	-17	NA	7460567	7403265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
ENSMUST00000088217.12	chrX	+	5234	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	40.4669412401448	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACATAGTGACTGTGTT	NA	False	NA	12	True	AATAAA	-20	NA	76554618	76706589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ENSMUST00000088223.7	chr19	+	1103	7	FSM	ENSMUSG00000047656.10	ENSMUST00000088223.7	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	9.59166304662544	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGGTTCCTCATCCG	NA	False	NA	38	True	ATTAAA	-44	NA	6973539	6976414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6973893_6974063_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976025_6976137_6976259
ENSMUST00000088244.6	chr5	+	1712	12	FSM	ENSMUSG00000056367.15	ENSMUST00000088244.6	1712	12	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_4	20.0016528242663	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTTATATTTCCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	25965023	26055340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_25965127_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
ENSMUST00000088246.6	chr6	-	1509	5	FSM	ENSMUSG00000067702.6	ENSMUST00000088246.6	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_2	43.4453679924569	2018	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATTTCCTCTCTAGTGT	3461	False	NA	-8	True	AATAAA	-28	NA	125263005	125255236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_125255618_125257932_125258614_125259315_125259465_125259718_125259942_125262930
ENSMUST00000088248.13	chr2	+	967	6	FSM	ENSMUSG00000001403.14	ENSMUST00000088248.13	967	6	0	0	0	0	multi-exon	FALSE	canonical	3	1606	junction_1	43.6458474542539	11542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	False	NA	NA	False	AATAAA	-25	NA	164611817	164614827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_164612001_164612286_164612315_164613212_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUST00000088287.10	chr1	+	4322	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	0	0	0	0	multi-exon	FALSE	canonical	2	71	junction_6	20.1190335305671	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTGTGTGTGGTGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	33758975	33781645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ENSMUST00000088294.12	chr6	+	1883	10	FSM	ENSMUSG00000072770.10	ENSMUST00000088294.12	1883	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	45.7669890199324	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACGTGCTCTGCTTAGT	NA	False	NA	NA	False	AATAAA	-14	NA	125026921	125040230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452_125030916_125031635_125031769_125037772_125037953_125038048_125038217_125039398_125039483_125039898
ENSMUST00000088307.5	chr17	+	3030	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	0	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTATGTCTCTCTGTTA	NA	False	NA	NA	False	AATATA	-16	NA	25403527	25406636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25403615_25403693
ENSMUST00000088313.5	chrX	+	1338	6	FSM	ENSMUSG00000001964.15	ENSMUST00000088313.5	1338	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	106.854293315711	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	NA	False	NA	NA	False	AATAAA	-13	NA	73298435	73305154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73304387
ENSMUST00000088386.8	chr14	-	3121	23	FSM	ENSMUSG00000025557.11	ENSMUST00000088386.8	3121	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	5.65119017669934	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATATGTGTTTGTGTGT	3138	False	NA	-6	True	AATAAA	-12	NA	121742664	121697032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_121698186_121699878_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729103_121742630
ENSMUST00000088459.9	chrX	+	2864	5	FSM	ENSMUSG00000067771.10	ENSMUST00000088459.9	2864	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	16.161296358894	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTGTAGATGTCTAAGA	NA	False	NA	NA	False	AATAAA	-18	NA	72160652	72172868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72160742_72166673_72166742_72167034_72167132_72168423_72168590_72170424
ENSMUST00000088464.12	chr17	-	2504	20	FSM	ENSMUSG00000052752.16	ENSMUST00000088464.12	2504	20	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_18	54.3646251286069	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24738182	24727823	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104
ENSMUST00000088481.5	chrX	-	1821	4	FSM	ENSMUSG00000043453.6	ENSMUST00000088481.5	1821	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.471404520791032	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACATGCTCCAAATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	71430464	71425475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_71427050_71427946_71428036_71428780_71428874_71430399
ENSMUST00000088512.13	chr17	+	1816	8	FSM	ENSMUSG00000034681.18	ENSMUST00000088512.13	1816	8	0	0	0	0	multi-exon	FALSE	canonical	3	697	junction_1	319.314188567323	4007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGTTTTACTGTCTG	901	False	NA	NA	False	AATAAA	-24	NA	24633636	24644875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24633709_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUST00000088523.11	chr2	-	1996	16	FSM	ENSMUSG00000027639.17	ENSMUST00000088523.11	1996	16	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	41.6778118427539	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTTCCAGAGGATCTG	NA	False	NA	NA	False	NA	NA	NA	156977142	156943279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_156943364_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ENSMUST00000088610.11	chr2	+	569	3	FSM	ENSMUSG00000067847.14	ENSMUST00000088610.11	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_1	118.5	4869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTATTTTTACCTAGTA	6351	False	NA	17	True	AATAAA	-22	NA	155985958	155987717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_155986201_155986378_155986510_155987521
ENSMUST00000088627.11	chrX	+	3949	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	9.5	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTATAACTTTTTTTG	9500	False	NA	12	True	AATAAA	-18	NA	57076002	57081919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_57077598_57078721_57078886_57079729
ENSMUST00000088629.4	chrX	+	1951	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088629.4	1951	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	99.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGATTATTGTTTTAT	9867	False	NA	NA	False	NA	NA	NA	57076369	57087096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_57077598_57078721_57078886_57086537
ENSMUST00000088765.9	chr17	+	2973	4	FSM	ENSMUSG00000044501.18	ENSMUST00000088765.9	2973	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	13.4412301024373	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTCTAGTCATTTATCT	NA	False	NA	24	True	AATAAA	-24	NA	22580433	22596261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_22580689_22590971_22591070_22592623_22592751_22593768
ENSMUST00000088785.6	chr7	-	1709	4	FSM	ENSMUSG00000078768.3	ENSMUST00000088785.6	1709	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	16.2685791225499	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTGTGTGGCAGTGTAA	9923	False	NA	2	True	AAAACA	-22	NA	29789952	29776761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_29778044_29780515_29780643_29786524_29786585_29789712
ENSMUST00000088787.7	chr17	+	2652	6	FSM	ENSMUSG00000067931.7	ENSMUST00000088787.7	2652	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	15.6025638918737	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATGGAAAGATTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	21787269	21808961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_21787508_21789310_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806966
ENSMUST00000088811.7	chr17	+	3800	5	FSM	ENSMUSG00000067942.7	ENSMUST00000088811.7	3800	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	17.6405073623181	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTCTTTTGTTTGT	NA	False	NA	13	True	AGTAAA	-24	NA	21229202	21249123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_21229249_21231937_21232035_21240333_21240461_21240967_21241097_21245722
ENSMUST00000088874.10	chrX	+	1728	5	FSM	ENSMUSG00000015217.12	ENSMUST00000088874.10	1728	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	352.060630431748	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCACCAGTCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	70599595	70604282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_70599844_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ENSMUST00000088922.5	chr14	-	1467	8	FSM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_6	43.0538343595692	2530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGATGGCAACTGTTATC	NA	False	NA	-17	True	AATAAA	-19	NA	76248305	76134376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144_76245219_76248119
ENSMUST00000088940.6	chr17	+	4405	17	FSM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	216.5692369082	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6320744	6358589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ENSMUST00000089017.12	chr14	-	6143	26	FSM	ENSMUSG00000033487.15	ENSMUST00000089017.12	6143	26	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_25	24.1979833870511	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTTTGTATTTATAA	NA	False	NA	-1	True	AATAAA	-24	NA	72947443	72775385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ENSMUST00000089052.11	chr7	-	2344	9	FSM	ENSMUSG00000070426.13	ENSMUST00000089052.11	2344	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	114.601483410993	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGGACACGCATTTGC	NA	False	NA	-15	True	AATAAA	-19	NA	101714676	101668358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714473
ENSMUST00000089059.9	chr2	+	1743	13	FSM	ENSMUSG00000019188.17	ENSMUST00000089059.9	1743	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	48.170054667466	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGAGCTCTCAGCAGCTC	NA	False	NA	21	True	ATTAAA	-35	NA	152511407	152546956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152545914_152546115_152546541
ENSMUST00000089140.13	chr2	+	1486	10	FSM	ENSMUSG00000027455.17	ENSMUST00000089140.13	1486	10	0	0	0	0	multi-exon	FALSE	canonical	1	251	junction_3	435.093348860014	3783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATTCTGTTATATAGAAA	NA	False	NA	24	True	AAGAAA	-6	NA	151336101	151353230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151336333_151338503_151338602_151342634_151342710_151344374_151344381_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ENSMUST00000089155.6	chr15	-	789	5	FSM	ENSMUSG00000068101.12	ENSMUST00000089155.6	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	529.66121247454	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTTGTAGATGCAGA	NA	False	NA	-17	True	AAAAAG	-14	NA	82128928	82118279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_82118711_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ENSMUST00000089157.11	chr15	-	1202	6	FSM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_2	108.849253557386	3961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	82128949	82117979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ENSMUST00000089174.6	chr15	+	2046	7	FSM	ENSMUSG00000068114.8	ENSMUST00000089174.6	2046	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	6.64371047599825	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTCTTTGGCTTCTTTT	NA	False	NA	25	True	AATAAA	-36	NA	82012122	82026404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_82012251_82014252_82014372_82015624_82015747_82015945_82016031_82018781_82018964_82019270_82019343_82025066
ENSMUST00000089245.7	chr6	-	1638	8	FSM	ENSMUSG00000035378.18	ENSMUST00000089245.7	1638	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	71.8828411871905	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAGGTGTAAATAATTAG	NA	False	NA	-3	True	AATAAA	-17	NA	100648100	100550043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_100550750_100588696_100588818_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ENSMUST00000089287.7	chr6	-	2257	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGTATATCAAT	NA	False	NA	-7	True	AATAAA	-24	NA	97182608	97160967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ENSMUST00000089293.11	chr15	-	3388	6	FSM	ENSMUSG00000053411.17	ENSMUST00000089293.11	3388	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	177.465038810465	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACTTCTGTGTGTCTGG	NA	False	NA	-10	True	ATTAAA	-21	NA	79816840	79800010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ENSMUST00000089377.6	chr15	+	800	4	FSM	ENSMUSG00000068220.7	ENSMUST00000089377.6	800	4	0	0	0	0	multi-exon	FALSE	canonical	3	1912	junction_2	63.4367576584918	8102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGATGACACATACTT	NA	False	NA	NA	False	AATAAA	-15	NA	78810924	78814665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_78811005_78812169_78812250_78813832_78814005_78814197
ENSMUST00000089402.10	chrX	-	1839	13	FSM	ENSMUSG00000031169.14	ENSMUST00000089402.10	1839	13	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_2	6.61857655055493	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTCGGTTTTTTGGTTT	1988	False	NA	-2	True	AATAAA	-17	NA	8072740	8060088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
ENSMUST00000089473.5	chr14	-	5186	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	22.1702691308277	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAAATCTGTTACAGGTG	NA	False	NA	58	True	NA	NA	NA	58127733	58070159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ENSMUST00000089559.11	chr2	-	1238	9	FSM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	130.411607995608	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGCCAGAAGTCCCACT	NA	False	NA	71	True	AATAAA	-18	NA	130506579	130495879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267_130505475_130506394
ENSMUST00000089570.7	chr6	+	1216	6	FSM	ENSMUSG00000054226.14	ENSMUST00000089570.7	1216	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	87.3026918256247	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTAGATTTGGACTCTTA	3418	False	NA	NA	False	ATTAAA	-18	NA	85892728	85905502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_85892773_85898404_85898494_85900114_85900199_85901341_85901505_85904222_85904346_85904789
ENSMUST00000089645.13	chr6	-	1725	8	FSM	ENSMUSG00000068329.13	ENSMUST00000089645.13	1725	8	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_7	63.5991913695225	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGGTTGGATCTTCTCC	1897	False	NA	2	True	AATAAA	-31	NA	83031552	83028246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
ENSMUST00000089651.6	chr6	-	1807	5	FSM	ENSMUSG00000068335.7	ENSMUST00000089651.6	1807	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5.31507290636732	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCTGCGTATGAATGAG	NA	False	NA	-4	True	ATTAAA	-19	NA	83010452	83007914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83009042_83009211_83009397_83009515_83009610_83009747_83010048_83010351
ENSMUST00000089680.10	chr15	-	973	8	FSM	ENSMUSG00000055762.17	ENSMUST00000089680.10	973	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	1574.61569007443	1871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCGCCTCTTGTGTTAC	NA	False	NA	-8	True	ATTAAA	-14	NA	75781168	75767338	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75769074_75769132_75772980_75773102_75781093
ENSMUST00000089765.9	chr15	+	871	3	FSM	ENSMUSG00000068391.9	ENSMUST00000089765.9	871	3	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_2	8	1050	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTTCATTGAAGTGG	NA	False	NA	7	True	ATTAAA	-18	NA	72962240	72965924	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_72962433_72964681_72964809_72965372
ENSMUST00000089770.11	chr15	-	4048	22	FSM	ENSMUSG00000047921.18	ENSMUST00000089770.11	4048	22	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	34.9692446667405	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTGATTTCAGACT	NA	False	NA	-1	True	AATAAA	-21	NA	72933053	72461468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_72462012_72462464_72462689_72557131_72557223_72565352_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ENSMUST00000089950.11	chr3	-	1381	9	FSM	ENSMUSG00000038975.15	ENSMUST00000089950.11	1381	9	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_5	268.62508724987	2077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6100	False	NA	-2	True	AATAAA	-15	NA	153618646	153612925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ENSMUST00000089968.13	chr17	+	1991	6	FSM	ENSMUSG00000036036.16	ENSMUST00000089968.13	1991	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1202.47155475712	2166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37312054	37321524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_37312233_37313343_37313670_37314177_37314208_37315688_37315796_37316950_37317087_37320310
ENSMUST00000090002.10	chr6	-	1662	12	FSM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_2	2567.02803044511	1461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446825	51438103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUST00000090006.12	chr8	+	3815	16	FSM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	0	0	0	0	multi-exon	TRUE	canonical	3	487	junction_6	37.7685348169905	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTTGGCTCTGTATT	NA	False	NA	16	True	AATAAA	-22	NA	129412134	129459681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ENSMUST00000090020.13	chr11	+	3771	23	FSM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	33.8534762061397	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	9941	False	NA	22	True	AATAAA	-18	NA	96941453	96959730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ENSMUST00000090023.13	chr16	+	2080	11	FSM	ENSMUSG00000022841.16	ENSMUST00000090023.13	2080	11	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	799.773617969485	5569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTGGGTCTTG	1353	False	NA	17	True	NA	NA	NA	20354227	20362806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ENSMUST00000090031.12	chr3	+	593	3	FSM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	3573	junction_2	41.5	26635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGGGTACTAATCTTT	NA	False	NA	26	True	AATAAA	-39	NA	146205561	146211327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_146205776_146209014_146209155_146211088
ENSMUST00000090042.12	chr2	-	2874	20	FSM	ENSMUSG00000033808.17	ENSMUST00000090042.12	2874	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	102.185508348021	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234550	120185792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202114_120204391_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ENSMUST00000090192.12	chr16	-	2609	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	0	0	0	0	multi-exon	FALSE	canonical	3	1494	junction_3	290.114153777823	5752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGTGTATGGGTTTCT	NA	False	NA	-1	True	AATAAA	-18	NA	17019356	16969878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
ENSMUST00000090243.8	chr6	-	4030	15	FSM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	0	0	0	0	multi-exon	TRUE	canonical	3	160	junction_14	38.6108925098626	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	-8	True	AATAAA	-16	NA	39354609	39311706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ENSMUST00000090292.13	chr15	+	4519	35	FSM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_3	95.4793814587056	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTTGCTACAGAGTAT	53	False	NA	30	True	ATTAAA	-20	NA	12824948	12935377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ENSMUST00000090476.10	chr3	-	809	6	FSM	ENSMUSG00000038543.14	ENSMUST00000090476.10	809	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	2.22710574513201	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCCTACTTCTTAATGA	NA	False	NA	NA	False	NA	NA	NA	95799317	95791265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95791550_95792281_95792384_95795452_95795609_95796168_95796228_95797034_95797122_95799196
ENSMUST00000090546.6	chr3	-	2864	3	FSM	ENSMUSG00000068732.6	ENSMUST00000090546.6	2864	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	15	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTGCTTTGTCAT	5274	False	NA	-14	True	AATAAA	-15	NA	108469782	108463740	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_108466277_108467502_108467635_108469586
ENSMUST00000090554.11	chr2	+	2654	8	FSM	ENSMUSG00000068735.15	ENSMUST00000090554.11	2654	8	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	50.0424309757148	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAATCTGCGTGGTGT	NA	False	NA	10	True	AAGAAA	-43	NA	93017928	93032094	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_93018093_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ENSMUST00000090559.12	chr2	-	3976	12	FSM	ENSMUSG00000068742.12	ENSMUST00000090559.12	3976	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	10.1019595513375	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGTGTAATCTATCT	NA	False	NA	NA	False	AGTAAA	-2	NA	92264388	92233990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ENSMUST00000090561.10	chr3	+	1686	8	FSM	ENSMUSG00000068744.13	ENSMUST00000090561.10	1686	8	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	57.4402973103556	1952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTGAAAGTAGATTTT	7032	False	NA	16	True	AATAAA	-24	NA	108291154	108295495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ENSMUST00000090614.11	chr2	+	2866	14	FSM	ENSMUSG00000027247.17	ENSMUST00000090614.11	2866	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	93.668116113923	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGGCTGTTTAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	91480566	91502671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_91480598_91482108_91482169_91484390_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUST00000090678.11	chr3	-	2407	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	0	0	0	0	multi-exon	TRUE	canonical	3	409	junction_7	23.7667234354495	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTCCCTTCTCTTTAT	NA	False	NA	-18	True	AATAAA	-12	NA	105708652	105634582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ENSMUST00000090682.4	chr2	+	2437	4	FSM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	4.10960933531265	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCTGTGTTGACT	2338	False	NA	NA	False	AATAAA	-42	NA	90735086	90740905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_90735254_90736009_90736628_90737888_90737996_90739360
ENSMUST00000090749.13	chr11	+	746	5	FSM	ENSMUSG00000071866.13	ENSMUST00000090749.13	746	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	16065.018555467	171129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCCTTGTTTGTATTGG	NA	False	NA	0	True	AATAAA	-17	NA	6365869	6369815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_6365985_6368100_6368132_6368225_6368315_6369112_6369286_6369477
ENSMUST00000090759.5	chr3	+	1754	10	FSM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	0	0	0	0	multi-exon	FALSE	canonical	3	1030	junction_1	83.6891662236509	3853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTTTTGCCTGTGTGT	NA	False	NA	11	True	NA	NA	NA	97066092	97083890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ENSMUST00000090797.11	chr3	+	1511	16	FSM	ENSMUSG00000028109.15	ENSMUST00000090797.11	1511	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_15	121.749177501214	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCACTGAATACAACCTGC	NA	False	NA	NA	False	AATACA	-22	NA	95466987	95494982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95467035_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95492845_95492901_95494691
ENSMUST00000090811.11	chr2	+	3309	8	FSM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	26.8791702981764	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTGATCTTTGATAAA	NA	False	NA	NA	False	AATAAA	-30	NA	73142944	73168162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73160106_73160270_73161326_73161502_73166054
ENSMUST00000090827.12	chr11	-	2419	8	FSM	ENSMUSG00000038208.14	ENSMUST00000090827.12	2419	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	8.7084289452161	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTCTGCTACTCTAT	NA	False	NA	NA	False	AATAAA	-21	NA	98291316	98279502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_98280928_98281112_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98288721_98288875_98289710_98289809_98291040
ENSMUST00000090852.11	chr2	+	2001	12	FSM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	0	0	0	0	multi-exon	FALSE	canonical	3	1543	junction_7	118.150135613357	6663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGCCAAACATT	NA	False	NA	-38	True	NA	NA	NA	69691905	69702130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ENSMUST00000090908.11	chr3	-	3629	25	FSM	ENSMUSG00000042520.17	ENSMUST00000090908.11	3629	25	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_17	264.856079891619	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTATGCTTTTATGTC	3570	False	NA	NA	False	AATAAA	-18	NA	89959759	89913300	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ENSMUST00000090976.10	chr2	-	1153	7	FSM	ENSMUSG00000026761.13	ENSMUST00000090976.10	1153	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	170.808290847436	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGACAGACTTTGGGTT	NA	False	NA	NA	False	NA	NA	NA	48839246	48821969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_48822610_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ENSMUST00000091142.4	chr2	+	2196	5	FSM	ENSMUSG00000069020.10	ENSMUST00000091142.4	2196	5	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_1	41.2158949921023	1726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGTTGTT	NA	False	NA	14	True	AATAAA	-24	NA	29717353	29735014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29717448_29722703_29722775_29731413_29731496_29732732_29732782_29733114
ENSMUST00000091236.11	chr13	-	3299	12	FSM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_6	235.263031976713	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTTTCCAAACAAATTC	NA	False	NA	NA	False	ACTAAA	-35	NA	111626562	111562465	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ENSMUST00000091288.13	chr2	+	2184	3	FSM	ENSMUSG00000079037.10	ENSMUST00000091288.13	2184	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	0.5	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGCGGGGTTTGTTCT	NA	False	NA	7	True	ATTAAA	-17	NA	131751847	131780349	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_131751924_131754114_131754213_131778339
ENSMUST00000091295.14	chr13	-	2140	8	FSM	ENSMUSG00000041431.17	ENSMUST00000091295.14	2140	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	1285.22781272903	2276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTGCCCTTTTGACTG	NA	False	NA	-6	True	AATAAA	-28	NA	100922994	100915239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100921964_100922127_100922240_100922412_100922889
ENSMUST00000091299.8	chr13	-	1988	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	2953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGTTTATGGACTATT	NA	False	NA	NA	False	CATAAA	-17	NA	100867447	100839138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ENSMUST00000091325.10	chr3	+	3391	19	FSM	ENSMUSG00000027550.15	ENSMUST00000091325.10	3391	19	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	18.5947689444845	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTGATAATTGCACAC	NA	False	NA	NA	False	CATAAA	-26	NA	14598883	14631163	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605127_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ENSMUST00000091354.12	chr3	-	2193	6	FSM	ENSMUSG00000027506.16	ENSMUST00000091354.12	2193	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1287.01132862147	1978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGGTTTCAATATTTA	NA	False	NA	-28	True	AATAAA	-15	NA	9029106	8994657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9028906
ENSMUST00000091374.9	chr1	-	1215	5	FSM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	0	0	0	0	multi-exon	FALSE	canonical	3	3231	junction_1	432.6531520745	10906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCTCCTTTTATTTTA	589	False	NA	0	True	AATAAA	-21	NA	59709993	59678592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59709838
ENSMUST00000091429.12	chr2	-	871	6	FSM	ENSMUSG00000063275.16	ENSMUST00000091429.12	871	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	43.3340512761039	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGCATTGTTTCTTGA	NA	False	NA	-2	True	AATAAA	-19	NA	14060831	14031641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_14031818_14040589_14040769_14049593_14049683_14049758_14049778_14049948_14050067_14060541
ENSMUST00000091466.4	chr13	+	5381	44	FSM	ENSMUSG00000033991.10	ENSMUST00000091466.4	5381	44	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_18	33.3040145082969	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTTTTAAATTTTTTT	NA	False	NA	NA	False	AAGAAA	-39	NA	76246852	76336102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718
ENSMUST00000091504.5	chr2	+	1676	13	FSM	ENSMUSG00000026643.17	ENSMUST00000091504.5	1676	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	77.5622957513651	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGTAGTTGTTAACAAT	1043	False	NA	10	True	AATAAA	-19	NA	3285304	3327235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ENSMUST00000091556.12	chr2	+	4657	5	FSM	ENSMUSG00000062098.12	ENSMUST00000091556.12	4657	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	2.87228132326901	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGCTTTTTTAGTATTT	NA	False	NA	16	True	AATAAA	-17	NA	138098484	138129342	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_138098675_138120885_138121178_138121668_138121760_138122292_138122412_138125377
ENSMUST00000091579.6	chr13	-	1523	12	FSM	ENSMUSG00000021552.8	ENSMUST00000091579.6	1523	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	54.7743681383791	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGATCTTCACTGTC	NA	False	NA	2	True	AATAAA	-22	NA	58422002	58381159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421887
ENSMUST00000091609.11	chr13	-	2186	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAAAGACTGTATTTTA	7405	False	NA	19	True	AATAAA	-41	NA	54759157	54740213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
ENSMUST00000091614.7	chr4	+	3617	16	FSM	ENSMUSG00000028423.16	ENSMUST00000091614.7	3617	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_15	162.820473733086	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	6045	False	NA	16	True	NA	NA	NA	40970905	41012608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011526
ENSMUST00000091641.13	chr13	+	1785	9	FSM	ENSMUSG00000021431.16	ENSMUST00000091641.13	1785	9	0	0	0	0	multi-exon	FALSE	canonical	1	67	junction_6	66.7082032062025	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGAAGTGCTGTGTG	NA	False	NA	25	True	ATTAAA	-26	NA	38388920	38411641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ENSMUST00000091672.13	chr13	+	1161	8	FSM	ENSMUSG00000069255.14	ENSMUST00000091672.13	1161	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	7.4258236676383	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGTGCAGTGTGTTCT	NA	False	NA	9	True	AATAAA	-22	NA	30843981	30895214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659_30892733_30894688
ENSMUST00000091878.6	chr4	+	2798	4	FSM	ENSMUSG00000066009.9	ENSMUST00000091878.6	2798	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	56.5115524079418	1984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	146033914	146063191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_146034017_146054375_146054480_146058453_146058581_146060726
ENSMUST00000091924.10	chr3	-	1427	8	FSM	ENSMUSG00000028104.15	ENSMUST00000091924.10	1427	8	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_6	13.8534604827436	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTAACAGAGTGATGT	NA	False	NA	0	True	NA	NA	NA	96501497	96485187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96489403_96489572_96501399
ENSMUST00000091925.6	chr18	+	438	1	FSM	ENSMUSG00000096699.2	ENSMUST00000091925.6	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	999	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGATGCTGGGTTAA	NA	False	NA	NA	False	NA	NA	NA	42385462	42385900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_42385500_42385900
ENSMUST00000092033.4	chr10	-	1481	13	FSM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_9	21.4048281157936	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGCAGTGCTGTGAAGTC	NA	False	NA	NA	False	TTTAAA	-14	NA	128012348	127968975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ENSMUST00000092073.11	chr7	+	3385	3	FSM	ENSMUSG00000055652.15	ENSMUST00000092073.11	3385	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	16	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCTTTGGGTTCTGATT	NA	False	NA	16	True	AATAAA	-17	NA	75498085	75523878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_75498233_75515084_75516890_75522445
ENSMUST00000092170.7	chr10	-	3012	7	FSM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	17.9017379665278	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	-4	True	TATAAA	-19	NA	115198172	115176646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
ENSMUST00000092404.13	chr11	-	1899	3	FSM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	0	0	0	0	multi-exon	FALSE	canonical	3	1775	junction_2	41.5	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCCTGGTCTTTTGTTT	6003	False	NA	-5	True	ATTAAA	-31	NA	116743920	116740726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116741788_116742846_116743158_116743393
ENSMUST00000092425.11	chr11	+	737	6	FSM	ENSMUSG00000017404.13	ENSMUST00000092425.11	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	6391.5163271324	187479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGCTGTGTCTT	NA	False	NA	15	True	AATAAA	-33	NA	97917535	97921318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_97917589_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ENSMUST00000092462.12	chr10	+	3651	21	FSM	ENSMUSG00000036875.16	ENSMUST00000092462.12	3651	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	84.7772964890955	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGGAGATCAGAGGACTA	NA	False	NA	NA	False	NA	NA	NA	62782853	62809546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805558_62805738_62807622_62807770_62809029
ENSMUST00000092473.5	chr10	-	2712	9	FSM	ENSMUSG00000020078.17	ENSMUST00000092473.5	2712	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	336.090552344156	2010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTCATTACAGCAT	5405	False	NA	-5	True	AATAAA	-15	NA	62322377	62291013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322156
ENSMUST00000092498.12	chr10	-	4070	15	FSM	ENSMUSG00000020097.15	ENSMUST00000092498.12	4070	15	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_14	85.0811437417726	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983453	60934420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
ENSMUST00000092512.11	chr10	+	2387	14	FSM	ENSMUSG00000019916.15	ENSMUST00000092512.11	2387	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	50.4085087210412	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTCTGTGTGGTAT	NA	False	NA	18	True	NA	NA	NA	59159185	59207778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUST00000092559.13	chr11	+	2083	10	FSM	ENSMUSG00000056938.17	ENSMUST00000092559.13	2083	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	33.6455746177417	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992507	103003026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_102992615_102993507_102993923_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ENSMUST00000092567.11	chr11	-	1890	3	FSM	ENSMUSG00000034520.15	ENSMUST00000092567.11	1890	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	376	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	NA	False	NA	-8	True	ATTAAA	-22	NA	102710526	102690404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102692022_102693666_102693743_102710329
ENSMUST00000092569.13	chr11	-	2366	5	FSM	ENSMUSG00000020925.17	ENSMUST00000092569.13	2366	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	239.593405585379	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTCTGTCTTGTTCTTT	NA	False	NA	-4	True	AATAAA	-16	NA	102588608	102575511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102577323_102579626_102579686_102581026_102581163_102582936_102583025_102588336
ENSMUST00000092614.9	chr6	+	866	9	FSM	ENSMUSG00000069678.11	ENSMUST00000092614.9	866	9	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	14.5408906192159	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	150	False	NA	16	True	AATAAA	-8	NA	83055370	83057828	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ENSMUST00000092618.9	chr6	+	1769	12	FSM	ENSMUSG00000068328.11	ENSMUST00000092618.10	1769	12	0	0	0	0	multi-exon	TRUE	canonical	3	960	junction_10	78.8006166859286	3337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGGATCCCAGCTCAAT	5213	False	NA	NA	False	ACTAAA	-13	NA	83031501	83034789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUST00000092620.6	chr10	-	635	1	FSM	ENSMUSG00000069682.7	ENSMUST00000092620.6	635	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	182534	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAATCAATAGAC	NA	False	NA	-8	True	AATAAA	-21	NA	29575376	29574741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_29574700_29575400
ENSMUST00000092673.11	chr10	+	2576	12	FSM	ENSMUSG00000019970.16	ENSMUST00000092673.11	2576	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	274.769775907151	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGCATAAATTGTGTCA	NA	False	NA	6	True	AATAAA	-12	NA	21869788	21875790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_21870081_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ENSMUST00000092674.14	chr10	+	2625	5	FSM	ENSMUSG00000019977.17	ENSMUST00000092674.14	2625	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	452.231688407613	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGCATGTTATTTAAAT	NA	False	NA	NA	False	AATAAA	-24	NA	21171936	21187108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997
ENSMUST00000092678.10	chr10	+	5307	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_10	195.138687701892	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2790	False	NA	16	True	AATAAA	-17	NA	20188214	20218247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ENSMUST00000092688.12	chr11	-	1399	9	FSM	ENSMUSG00000017176.18	ENSMUST00000092688.12	1399	9	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_8	92.107868149252	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACGCGTCTTTAATCCC	NA	False	NA	-2	True	ATTAAA	-19	NA	100331915	100320178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654_100331754_100331869
ENSMUST00000092689.9	chr11	-	1344	8	FSM	ENSMUSG00000017176.18	ENSMUST00000092689.9	1344	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	183.081112836772	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGCACGCGTCTTTAAT	NA	False	NA	-5	True	ATTAAA	-16	NA	100331846	100320181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331753
ENSMUST00000092706.13	chr11	+	4614	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAGATGCCTCTGCCAT	17	False	NA	NA	False	AATAAA	-18	NA	98798626	98814762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
ENSMUST00000092720.4	chr5	-	3341	4	FSM	ENSMUSG00000072763.3	ENSMUST00000092720.4	3341	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	21.5148527508066	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGGTATC	6131	False	NA	-3	True	NA	NA	NA	109838907	109822410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_109825258_109826379_109826441_109826628_109826756_109838601
ENSMUST00000092735.12	chr11	-	2627	18	FSM	ENSMUSG00000018160.16	ENSMUST00000092735.12	2627	18	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	53.6447367918524	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTCTGTGTTTTTTAT	NA	False	NA	NA	False	AATAAA	-42	NA	98084086	98042979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_98043790_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ENSMUST00000092750.12	chr4	+	4154	5	FSM	ENSMUSG00000066007.16	ENSMUST00000092750.12	4154	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	216.257947830825	4750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146094259	146135325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_146094318_146094927_146095022_146126781_146126867_146129876_146130004_146131535
ENSMUST00000092821.10	chr11	+	2769	24	FSM	ENSMUSG00000059439.16	ENSMUST00000092821.10	2769	24	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_23	18.8377812860411	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCAGCCACCTGCTTCTG	3523	False	NA	NA	False	NA	NA	NA	85244037	85716176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85716027
ENSMUST00000092996.5	chr11	+	2412	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_2	26.3469163281019	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACATGAAGCCTAATGAA	NA	False	NA	14	True	AATAAA	-32	NA	66943495	66956398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
ENSMUST00000093039.6	chr8	-	2912	5	FSM	ENSMUSG00000038697.16	ENSMUST00000093039.6	2912	5	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_4	121.207208944023	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGCATCT	4094	False	NA	36	True	ATTAAA	-15	NA	124747747	124723056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747599
ENSMUST00000093040.13	chr7	-	1192	8	FSM	ENSMUSG00000053291.16	ENSMUST00000093040.13	1192	8	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_1	28.7402157263998	1391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGCCTCTGTCATTCTG	NA	False	NA	-1	True	CATAAA	-19	NA	26878321	26867848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
ENSMUST00000093043.7	chr8	+	1681	11	FSM	ENSMUSG00000040220.11	ENSMUST00000093043.7	1681	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	6.18789140176199	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCTGTCGTTGTGAGG	NA	False	NA	7	True	AATGAA	-21	NA	124245572	124263389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124245692_124247342_124247430_124249676_124249875_124250816_124251024_124252357_124252413_124253203_124253410_124254650_124254819_124255116_124255204_124257565_124257776_124259991_124260058_124263111
ENSMUST00000093061.7	chr11	+	2251	6	FSM	ENSMUSG00000020455.17	ENSMUST00000093061.7	2251	6	0	0	0	0	multi-exon	FALSE	canonical	2	58	junction_2	16.6781293915115	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	1689	False	NA	14	True	AATAAA	-14	NA	58868941	58882283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_58869471_58872066_58872163_58872818_58873050_58879550_58879574_58879654_58879756_58881012
ENSMUST00000093078.13	chr8	+	2289	13	FSM	ENSMUSG00000025316.17	ENSMUST00000093078.13	2289	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	55.5245191084283	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCAGTGTTGTTG	NA	False	NA	7	True	AATAAA	-15	NA	122677230	122752916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ENSMUST00000093099.13	chr8	-	3236	15	FSM	ENSMUSG00000031832.16	ENSMUST00000093099.13	3236	15	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_9	12.1866856085832	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGTGTGTAAAGCCCAC	1064	False	NA	-2	True	NA	NA	NA	120331961	120324713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_120326243_120326319_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120328520_120329569_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
ENSMUST00000093107.12	chr11	+	2263	16	FSM	ENSMUSG00000018906.15	ENSMUST00000093107.12	2263	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	14.6945190084225	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAATAGCCTTATTTT	NA	False	NA	15	True	AATAAA	-17	NA	53991749	54022478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
ENSMUST00000093120.13	chr8	-	2131	15	FSM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_14	463.92143951408	4009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737898	112720074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112737841
ENSMUST00000093132.13	chr11	+	1949	13	FSM	ENSMUSG00000020385.17	ENSMUST00000093132.13	1949	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	48.5840480221875	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGTGATTGAGTATT	NA	False	NA	13	True	AGTAAA	-13	NA	51153940	51172591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_51154097_51157997_51158159_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ENSMUST00000093138.13	chr11	+	4407	21	FSM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_18	14.0538251020852	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGTGTGCAGTGCTT	NA	False	NA	7	True	AATAAA	-20	NA	50022222	50062857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ENSMUST00000093140.5	chr11	+	962	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	0	0	0	0	multi-exon	FALSE	canonical	3	1006	junction_1	419	4615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAAACCTTCATCGTA	4011	False	NA	129	True	AATAAA	-17	NA	120489357	120496602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120489697_120490067_120490195_120496106
ENSMUST00000093169.3	chr11	-	958	1	FSM	ENSMUSG00000069899.4	ENSMUST00000093169.3	958	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1388	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGACAGAGAGAGAGAGAA	1797	False	NA	NA	False	AATAAA	-30	NA	45943138	45942180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_45942200_45943100
ENSMUST00000093191.3	chr11	-	2505	12	FSM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_9	17.9669117367279	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTGTATTTTTTAAT	NA	False	NA	-7	True	AATAAA	-15	NA	34724468	34700016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
ENSMUST00000093201.13	chr11	-	1192	10	FSM	ENSMUSG00000057113.14	ENSMUST00000093201.13	1192	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	6125.12875954356	72354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113072	33102509	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUST00000093234.5	chr8	-	639	5	FSM	ENSMUSG00000031879.15	ENSMUST00000093234.5	639	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	369.363641957353	3050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCAGTATGCCTTAGCG	NA	False	NA	-10	True	AATAAA	-18	NA	105368333	105366479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_105366719_105367151_105367198_105367599_105367721_105367942_105368023_105368180
ENSMUST00000093271.8	chr8	+	3574	14	FSM	ENSMUSG00000031785.17	ENSMUST00000093271.8	3574	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.2826991162311	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAGTTGCCCGTCTCAG	7943	False	NA	28	True	AATAAA	-41	NA	95710998	95740827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_95711286_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
ENSMUST00000093336.8	chr16	-	1266	8	FSM	ENSMUSG00000049916.13	ENSMUST00000093336.8	1266	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	117.062516003464	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16942970	16931261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16941375_16941519_16942853
ENSMUST00000093346.6	chr11	-	519	4	FSM	ENSMUSG00000041126.17	ENSMUST00000093346.6	519	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	1363.86957669061	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTGTCTCAGTATTTC	NA	False	NA	-3	True	GATAAA	-16	NA	6394352	6378137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6378433_6379095_6379226_6389375_6389454_6394336
ENSMUST00000093350.10	chr11	+	4075	24	FSM	ENSMUSG00000020456.18	ENSMUST00000093350.10	4075	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	222.742486968574	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTTTGCATTGCATCGG	NA	False	NA	-36	True	AAAAAG	-19	NA	6241667	6306592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266764_6266856_6274877_6274923_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUST00000093357.12	chr8	-	1238	9	FSM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	13.3410784796432	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTAGTCTTCATTCTT	NA	False	NA	-2	True	AATAAA	-35	NA	85807375	85801663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_85801973_85802451_85802567_85802652_85802762_85802845_85802914_85806209_85806337_85806417_85806467_85806748_85806855_85806941_85807063_85807141
ENSMUST00000093402.12	chr11	+	3173	5	FSM	ENSMUSG00000020453.18	ENSMUST00000093402.12	3173	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	189.564467925822	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	6470	False	NA	14	True	ATTAAA	-16	NA	3240456	3259083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3256287_3256361_3257647
ENSMUST00000093454.8	chr8	+	3072	12	FSM	ENSMUSG00000070002.8	ENSMUST00000093454.8	3072	12	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	19.7818683154445	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTGTGGTTTGAGTAT	NA	False	NA	8	True	AATAAA	-16	NA	70992337	71045508	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ENSMUST00000093456.12	chr8	-	1216	5	FSM	ENSMUSG00000055553.17	ENSMUST00000093456.12	1216	5	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_4	146.224784150978	2361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTATAGCAACAGTGGCT	NA	False	NA	-13	True	AATAAA	-20	NA	70975830	70966045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70975712
ENSMUST00000093470.7	chr8	+	1396	2	FSM	ENSMUSG00000051147.11	ENSMUST00000093470.7	1396	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCAAAGTGGTATATTGA	NA	False	NA	NA	False	AATAAA	-25	NA	67947509	67955236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_67947555_67953885
ENSMUST00000093517.7	chr8	+	1520	7	FSM	ENSMUSG00000031628.10	ENSMUST00000093517.7	1520	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	80.3189821205977	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTTATTACTGGAAC	NA	False	NA	NA	False	TTTAAA	-9	NA	47070429	47091752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_47070532_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
ENSMUST00000093658.3	chr19	-	148	1	FSM	ENSMUSG00000070167.3	ENSMUST00000093658.3	148	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23021	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGTGCAGAAATGTAGCT	NA	False	NA	-9	True	NA	NA	NA	8866049	8865901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8865900_8866000
ENSMUST00000093786.9	chr9	+	1787	6	FSM	ENSMUSG00000010067.14	ENSMUST00000093786.9	1787	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	27.6723688902848	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGACTCTATAGATGTG	NA	False	NA	13	True	AATAAA	-20	NA	107428753	107439466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107429046_107431336_107431444_107434651_107434757_107434968_107435267_107435385_107435502_107438597
ENSMUST00000093795.10	chr9	+	2606	18	FSM	ENSMUSG00000056267.15	ENSMUST00000093795.10	2606	18	0	0	0	0	multi-exon	TRUE	canonical	3	165	junction_10	72.0150887688172	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99125494	99182457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ENSMUST00000093883.4	chr2	-	1363	5	FSM	ENSMUSG00000027122.16	ENSMUST00000093883.4	1363	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	101.504925988841	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACATAAACTTTAATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	106800736	106794773	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106800655
ENSMUST00000093906.5	chr11	+	3334	3	FSM	ENSMUSG00000017716.16	ENSMUST00000093906.5	3334	3	0	0	0	0	multi-exon	FALSE	canonical	3	1683	junction_1	252.5	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTCTTGGAGAAATGG	NA	False	NA	40	True	AATAAA	-29	NA	117740144	117746569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_117740288_117740579_117740690_117743488
ENSMUST00000093907.11	chr11	+	3616	12	FSM	ENSMUSG00000059248.14	ENSMUST00000093907.11	3616	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	260.952736292441	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCTTTGGCAAGACCT	3698	False	NA	103	True	AATAAA	-28	NA	117090486	117253151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_117090600_117109700_117109758_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUST00000093923.9	chr11	-	5425	19	FSM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_8	36.161503300992	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATAATCAAGGTGTTAA	2203	False	NA	-32	True	AATAAA	-16	NA	104441309	104393570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ENSMUST00000093943.10	chr11	+	1251	6	FSM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	266.87570140423	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTGTCTTTTGGTGGGG	NA	False	NA	NA	False	ATTAAA	-15	NA	96679984	96699466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96699009
ENSMUST00000093955.12	chr11	+	706	5	FSM	ENSMUSG00000020485.15	ENSMUST00000093955.12	706	5	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_3	25.7972866790289	3263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAAGGGTACTGAGGCCT	NA	False	NA	2	True	AATAAA	-19	NA	87628377	87634443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_87628495_87628992_87629100_87633621_87633678_87633883_87633938_87634071
ENSMUST00000093962.5	chr7	-	3740	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGTTGTCTGTGTTT	NA	False	NA	-4	True	AATAAA	-16	NA	144493606	144483667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ENSMUST00000094014.10	chr11	+	2130	5	FSM	ENSMUSG00000069808.14	ENSMUST00000094014.10	2130	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.18465843842649	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTATGTGCCCTGGCG	3406	False	NA	NA	False	ATTAAA	-17	NA	76092840	76100242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_76093082_76093377_76093462_76096079_76096282_76097953_76098050_76098735
ENSMUST00000094015.11	chr11	-	2645	21	FSM	ENSMUSG00000017288.16	ENSMUST00000094015.11	2645	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	19.6328169145439	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTCTTATTTTCTATCT	NA	False	NA	-3	True	ATTAAA	-15	NA	76070443	75937122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_75937409_75937890_75937996_75939265_75939404_75953810_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76054623_76054691_76057024_76057075_76065452_76065534_76070238
ENSMUST00000094028.10	chr3	-	3193	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_2	396.900211360208	1877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCTTCCTGAGTGTGA	9173	False	NA	NA	False	AGTAAA	-22	NA	104771821	104730094	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ENSMUST00000094065.5	chr11	+	492	4	FSM	ENSMUSG00000070394.11	ENSMUST00000094065.5	492	4	0	0	0	0	multi-exon	FALSE	canonical	3	1210	junction_1	145.470119115767	9143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCTTTATTCATC	NA	False	NA	NA	False	ATTAAA	-21	NA	69729349	69730444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69729476_69729745_69729778_69730013_69730095_69730191
ENSMUST00000094140.9	chr11	+	2438	8	FSM	ENSMUSG00000056598.17	ENSMUST00000094140.9	2438	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	9.45235096552758	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCCAAAGGACTCTGTG	3421	False	NA	NA	False	NA	NA	NA	60244154	60268104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_60244259_60244927_60245027_60249443_60249643_60254289_60254407_60255691_60255859_60261294_60261442_60265903_60266024_60266619
ENSMUST00000094154.6	chr7	-	2215	5	FSM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	0	0	0	0	multi-exon	FALSE	canonical	3	1409	junction_4	114.233313879971	2360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTCTTTCTAAGACAAAG	NA	False	NA	90	True	ATTAAA	-17	NA	99002446	98994595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002259
ENSMUST00000094194.10	chr11	+	2554	21	FSM	ENSMUSG00000020333.18	ENSMUST00000094194.10	2554	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.8709640538941	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAATTCCATTAAACATA	NA	False	NA	-29	True	AATATA	-13	NA	54210681	54252327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_54210812_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227761_54227840_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
ENSMUST00000094218.4	chr2	+	2275	13	FSM	ENSMUSG00000023393.16	ENSMUST00000094218.4	2275	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	30.6879455161143	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367055	180384073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ENSMUST00000094245.4	chr5	+	1259	1	FSM	ENSMUSG00000070473.5	ENSMUST00000094245.4	1259	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1911	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGCTGGAGCTTCCTTAT	5041	False	NA	38	True	AATAAA	-18	NA	135015067	135016326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135015100_135016300
ENSMUST00000094280.4	chr5	-	915	4	FSM	ENSMUSG00000070493.4	ENSMUST00000094280.4	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	5311	junction_3	452.984424554409	31113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGCGTCCTTATTGT	2064	False	NA	-3	True	AATAAA	-18	NA	129916311	129909996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_129910238_129911269_129911421_129912774_129913025_129916038
ENSMUST00000094329.11	chr2	-	3466	21	FSM	ENSMUSG00000017670.17	ENSMUST00000094329.11	3466	21	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_20	30.5759300757965	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	-17	True	AATAAA	-15	NA	165168399	165131074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ENSMUST00000094344.6	chr2	+	459	2	FSM	ENSMUSG00000070529.8	ENSMUST00000094344.6	459	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTCTTAATAATCACTG	-7	True	NA	NA	False	AATAAA	-22	NA	164497965	164499288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_164498119_164498982
ENSMUST00000094357.11	chr5	+	1366	11	FSM	ENSMUSG00000029452.19	ENSMUST00000094357.11	1366	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4.13400532171888	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAATCTCAGGTTC	NA	False	NA	NA	False	NA	NA	NA	121601214	121633457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_121601334_121601849_121601897_121602861_121602926_121605916_121606049_121620395_121620501_121625812_121625863_121627310_121627395_121629138_121629278_121631693_121631839_121632266_121632341_121633050
ENSMUST00000094361.11	chr12	-	3281	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	0	0	0	0	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	22804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGATTGGGTTGTA	NA	False	NA	NA	False	NA	NA	NA	110662829	110657038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ENSMUST00000094378.10	chr3	+	2617	12	FSM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_1	37.6308735565373	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCACGCCTTTAATCACAGC	NA	False	NA	NA	False	NA	NA	NA	89328934	89336406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ENSMUST00000094427.7	chr5	+	3857	22	FSM	ENSMUSG00000041638.19	ENSMUST00000094427.7	3857	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	166.686080501962	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAAGCAGGAGTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	115743754	115760707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_115743827_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752922_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ENSMUST00000094434.13	chr7	-	968	4	FSM	ENSMUSG00000050708.17	ENSMUST00000094434.13	968	4	0	0	0	0	multi-exon	FALSE	canonical	3	56898	junction_1	7359.57672393974	164477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109308	45107367	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108953
ENSMUST00000094469.6	chr11	+	707	5	FSM	ENSMUSG00000075702.11	ENSMUST00000094469.6	707	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	6.04152298679729	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGAGTCTCTTCTTATTT	NA	False	NA	22	True	ACTAAA	-14	NA	3464866	3467351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_3465074_3466260_3466297_3466485_3466521_3466841_3466921_3467001
ENSMUST00000094549.11	chr4	-	3203	3	FSM	ENSMUSG00000040842.18	ENSMUST00000094549.11	3203	3	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_2	123	1363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGCTTCCTGTCTCAT	NA	False	NA	0	True	AATACA	-31	NA	140867086	140840311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_140843176_140845837_140846093_140867002
ENSMUST00000094583.2	chr7	-	1625	2	FSM	ENSMUSG00000019429.8	ENSMUST00000094583.2	1625	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAAAATAATGTTTC	7666	False	NA	NA	False	AATAAA	-13	NA	30555603	30553754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30555330_30555553
ENSMUST00000094632.6	chr7	+	1868	16	FSM	ENSMUSG00000070699.6	ENSMUST00000094632.6	1868	16	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_5	21.0516824347446	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGGAAGTGCTGGCTG	278	False	NA	25	True	AATAAA	-33	NA	28441426	28453296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ENSMUST00000094657.10	chr4	+	1401	9	FSM	ENSMUSG00000054405.15	ENSMUST00000094657.10	1401	9	0	0	0	0	multi-exon	TRUE	canonical	3	2684	junction_8	233.065676097962	9166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	2331	False	NA	19	True	AATAAA	-19	NA	132262860	132281053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ENSMUST00000094693.11	chr12	+	1527	8	FSM	ENSMUSG00000021134.18	ENSMUST00000094693.11	1527	8	0	0	0	0	multi-exon	FALSE	canonical	3	1278	junction_1	232.390680904869	8746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992277	80997281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ENSMUST00000094698.2	chr1	+	3851	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	27.1317771871533	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTCCAGTGCTTTCTGT	4264	False	NA	11	True	AATAAA	-17	NA	91072824	91098517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ENSMUST00000094712.5	chr4	+	1120	3	FSM	ENSMUSG00000070737.11	ENSMUST00000094712.5	1120	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	3.5	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	NA	False	NA	7	True	TTTAAA	-4	NA	127019838	127023437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_127019987_127021611_127021793_127022646
ENSMUST00000094760.9	chr4	-	1859	12	FSM	ENSMUSG00000073758.11	ENSMUST00000094760.9	1859	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	4.41260403618604	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCAGTCTGGTCCTTGTGG	2003	False	NA	0	True	AGTAAA	-21	NA	126056419	126044394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_126044590_126044669_126044728_126044809_126045667_126045816_126045912_126045998_126046052_126046133_126046228_126054260_126054304_126055127_126055215_126055315_126055417_126055527_126055574_126055760_126055817_126056245
ENSMUST00000094815.5	chr7	-	1875	9	FSM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	0	0	0	0	multi-exon	FALSE	canonical	3	2941	junction_6	113.453115316416	4072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTGTCTCCTCTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	16121710	16060974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ENSMUST00000094835.9	chr2	-	1498	8	FSM	ENSMUSG00000040591.19	ENSMUST00000094835.9	1498	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	33.6470273423908	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATGAGTCTAAAGCCAG	NA	False	NA	-7	True	AATAAA	-18	NA	91275025	91108588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91214073_91214205_91274913
ENSMUST00000094897.5	chr7	-	2224	12	FSM	ENSMUSG00000055809.8	ENSMUST00000094897.5	2224	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	6.85022772137618	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGTCTCCAGTGCCAAGA	NA	False	NA	1	True	AATAAA	-35	NA	4535452	4525931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_4526859_4526936_4527012_4527142_4527255_4529412_4529531_4529865_4529989_4530092_4530219_4530440_4530624_4530951_4531110_4533772_4533867_4534736_4534880_4535185_4535275_4535376
ENSMUST00000094917.10	chr1	-	1869	13	FSM	ENSMUSG00000038079.15	ENSMUST00000094917.10	1869	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	71.220851737551	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTATTAACTGAAGGTTT	4052	False	NA	-10	True	AATAAA	-24	NA	59159253	59139748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59156489_59156501_59157133_59157166_59159110
ENSMUST00000095017.11	chr5	-	3498	17	FSM	ENSMUSG00000042508.17	ENSMUST00000095017.11	3498	17	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	37.579706957346	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGATTTTGAGCCATGCA	NA	False	NA	-5	True	AATAAA	-20	NA	9211749	9168871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ENSMUST00000095063.11	chr4	-	3237	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_4	41.7814252988095	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTACTGCATATGTTAA	-28	True	NA	NA	False	NA	NA	NA	59783866	59769636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
ENSMUST00000095078.3	chr2	+	4301	4	FSM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	22.6028513442196	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGAGGTCTCCATGC	NA	False	NA	7	True	AATAAA	-15	NA	30127733	30153802	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30127818_30130580_30130690_30145179_30147345_30151859
ENSMUST00000095128.10	chr4	-	659	4	FSM	ENSMUSG00000071014.11	ENSMUST00000095128.10	659	4	0	0	0	0	multi-exon	FALSE	canonical	3	2502	junction_3	28.8251433455046	11338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTAGCTACTTTTTTCT	-10	True	NA	63	True	AGTAAA	-20	NA	40279421	40270590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_40270848_40272809_40272855_40277652_40277746_40279157
ENSMUST00000095145.12	chr4	+	2403	4	FSM	ENSMUSG00000078773.12	ENSMUST00000095145.12	2403	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	85.9883713068226	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTATATATTGAATTTAT	-5	True	NA	NA	False	AATAAA	-9	NA	11558941	11585744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11583676
ENSMUST00000095147.9	chr2	-	5480	17	FSM	ENSMUSG00000025815.14	ENSMUST00000095147.9	5480	17	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_14	8.78119439484174	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAATTACCACCTT	NA	False	NA	-38	True	NA	NA	NA	5947603	5900925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ENSMUST00000095157.11	chr14	-	2666	11	FSM	ENSMUSG00000068245.15	ENSMUST00000095157.11	2666	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	111.176481325863	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATGTTGCATCAAAATAT	NA	False	NA	NA	False	AATAAA	-27	NA	59602919	59584855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59602815
ENSMUST00000095187.4	chr17	-	3530	21	FSM	ENSMUSG00000024135.11	ENSMUST00000095187.4	3530	21	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_9	11.0027269347194	319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTGCTGTTCATTG	NA	False	NA	-1	True	AATAAA	-15	NA	86452603	86292092	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
ENSMUST00000095188.7	chr17	+	1595	11	FSM	ENSMUSG00000071037.7	ENSMUST00000095188.7	1595	11	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_6	13.9484766193302	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTGTTTCAATCTATC	2173	False	NA	10	True	AATAAA	-26	NA	85397979	85766016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_85398292_85403917_85404091_85421210_85421276_85699000_85699062_85700885_85700941_85702029_85702094_85709853_85709921_85738898_85738974_85746954_85747019_85759623_85759756_85765489
ENSMUST00000095214.10	chr8	+	1731	6	FSM	ENSMUSG00000036810.17	ENSMUST00000095214.10	1731	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_2	26.3256528883901	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTAGTGGTTAGAGATT	NA	False	NA	9	True	AATAAA	-11	NA	88845396	88861734	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
ENSMUST00000095218.5	chr17	-	792	1	FSM	ENSMUSG00000071052.5	ENSMUST00000095218.5	792	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14492	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGTACACTAAATTTTC	NA	False	NA	NA	False	AAAAAG	-33	NA	58146216	58145424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_58145400_58146200
ENSMUST00000095220.4	chr8	+	1907	10	FSM	ENSMUSG00000008167.15	ENSMUST00000095220.4	1907	10	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_4	11.5864970366477	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTGAGCTTTCTGT	NA	False	NA	22	True	AATAAA	-22	NA	85786683	85793750	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
ENSMUST00000095259.10	chr8	+	2109	8	FSM	ENSMUSG00000007610.16	ENSMUST00000095259.10	2109	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	25.5774135055258	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCTTTCCCTCGAACT	NA	False	NA	139	True	NA	NA	NA	71941364	71946044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943709_71943854_71944068_71944235_71944720_71945000_71945182
ENSMUST00000095273.7	chr8	+	1161	5	FSM	ENSMUSG00000071078.7	ENSMUST00000095273.7	1161	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	248.840310239318	2352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAAACACCCCA	461	False	NA	9	True	NA	NA	NA	70583996	70586389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70584250_70584567_70584659_70585061_70585168_70585236_70585305_70585746
ENSMUST00000095410.8	chr12	+	2384	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	4	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTGTAGAACTCTGAT	5346	False	NA	19	True	AATAAA	-18	NA	110704425	110761462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_110704712_110745729_110745913_110759547
ENSMUST00000095438.10	chr8	-	2838	7	FSM	ENSMUSG00000039814.16	ENSMUST00000095438.10	2838	7	0	0	0	0	multi-exon	TRUE	canonical	2	24	junction_4	7.05730511991338	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTGTTAGTATCTA	NA	False	NA	-3	True	NA	NA	NA	19000991	18982744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000891
ENSMUST00000095457.11	chr10	+	2598	13	FSM	ENSMUSG00000006498.17	ENSMUST00000095457.11	2598	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	485.428926883798	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTCCCTGAGCCCTT	1624	False	NA	31	True	ATTAAA	-15	NA	79690501	79700193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694905_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUST00000095458.6	chr13	+	1918	3	FSM	ENSMUSG00000071180.6	ENSMUST00000095458.6	1918	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	47	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCCTGAGTTTTTGTCT	NA	False	NA	NA	False	AATAAA	-44	NA	108180979	108185706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_108181021_108182958_108183103_108183973
ENSMUST00000095579.11	chr17	-	1450	14	FSM	ENSMUSG00000041319.15	ENSMUST00000095579.11	1450	14	0	0	0	0	multi-exon	TRUE	canonical	3	160	junction_13	93.5049281997111	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	754	False	NA	-21	True	AATAAA	-14	NA	23892856	23887591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
ENSMUST00000095595.9	chr17	+	2698	6	FSM	ENSMUSG00000023902.19	ENSMUST00000095595.9	2698	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	55.9335319821661	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTCCTGATTTTTT	879	False	NA	28	True	AGTAAA	-12	NA	23819829	23829986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
ENSMUST00000095725.11	chr10	+	2127	8	FSM	ENSMUSG00000038240.14	ENSMUST00000095725.11	2127	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	6.25316246521123	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAAGTGTCTGCCTTTC	NA	False	NA	NA	False	ATTAAA	-28	NA	43097481	43316598	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_43098057_43174794_43174930_43221523_43221723_43248130_43248206_43269866_43270041_43271556_43271689_43289510_43289544_43315794
ENSMUST00000095739.10	chr13	-	3689	11	FSM	ENSMUSG00000021556.13	ENSMUST00000095739.10	3689	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_10	200.252240936275	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823594	59782809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59822774_59822911_59823540
ENSMUST00000095752.9	chr6	+	3130	12	FSM	ENSMUSG00000071337.12	ENSMUST00000095752.9	3130	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	49.110770393011	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTGTAAACTTCTACA	9775	False	NA	22	True	AATAAA	-24	NA	86381294	86409167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ENSMUST00000095786.6	chr6	-	1769	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	2707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTCTTGAAGTGTCTTA	NA	False	NA	1	True	ATTAAA	-27	NA	82629910	82623681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
ENSMUST00000095793.3	chr14	+	5264	37	FSM	ENSMUSG00000000365.10	ENSMUST00000095793.3	5264	37	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_25	208.622769314721	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGTTCATGTTATTAAG	NA	False	NA	17	True	AATAAA	-18	NA	56640037	56762489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ENSMUST00000095795.5	chr10	+	1271	7	FSM	ENSMUSG00000078452.11	ENSMUST00000095795.5	1271	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	20.4402924527893	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	22237792	22250038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_22237809_22238169_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
ENSMUST00000095893.11	chr10	+	2429	5	FSM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	80.5927260985754	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCACTGGTTTTTATTTG	NA	False	NA	9	True	AATAAA	-18	NA	4382466	4405141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471
ENSMUST00000095903.7	chr12	-	1923	3	FSM	ENSMUSG00000071456.7	ENSMUST00000095903.7	1923	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	5.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGAATTGTTAAGTGCT	NA	False	NA	NA	False	AATAAA	-11	NA	3476740	3455309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_3456712_3457643_3457925_3476500
ENSMUST00000095914.7	chr13	+	3015	7	FSM	ENSMUSG00000069255.14	ENSMUST00000095914.7	3015	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	5.61001089323561	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGTGCAGTGTGTTCT	NA	False	NA	9	True	AATAAA	-22	NA	30844083	30895214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659
ENSMUST00000095925.5	chr14	+	1372	6	FSM	ENSMUSG00000068417.9	ENSMUST00000095925.5	1372	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	36.6911433454996	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGACTTGCTTGTCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	51193448	51202206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_51193686_51196971_51197142_51200561_51200666_51200846_51201023_51201135_51201327_51201712
ENSMUST00000095932.5	chr14	-	1509	4	FSM	ENSMUSG00000071470.5	ENSMUST00000095932.5	1509	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	17.4419672692682	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCTTTTCTTTTTGGC	8876	False	NA	1	True	AATAAA	-20	NA	51033185	51026704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_51027470_51029429_51029764_51031014_51031332_51033092
ENSMUST00000095950.3	chr19	+	3405	8	FSM	ENSMUSG00000024983.11	ENSMUST00000095950.3	3405	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_7	16.8219972606327	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTTTTAAATGTTCCG	NA	False	NA	45	True	ATTAAA	-15	NA	55304782	55614993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248
ENSMUST00000096020.7	chr10	+	468	1	FSM	ENSMUSG00000071532.7	ENSMUST00000096020.7	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7055	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGAGTCCAGATGGCT	7726	False	NA	NA	False	NA	NA	NA	14398821	14399289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_14398800_14399300
ENSMUST00000096045.9	chr16	+	1479	7	FSM	ENSMUSG00000058550.16	ENSMUST00000096045.9	1479	7	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_4	76.5188792971309	1796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104097	48114600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
ENSMUST00000096057.5	chr16	-	1240	4	FSM	ENSMUSG00000022658.11	ENSMUST00000096057.5	1240	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	1.63299316185545	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAGTATAACTTTATT	NA	False	NA	-9	True	AATAAA	-15	NA	45544971	45531592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_45532073_45533294_45533398_45543285_45543461_45544489
ENSMUST00000096096.12	chr19	+	2366	9	FSM	ENSMUSG00000024989.16	ENSMUST00000096096.12	2366	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	113.762636660724	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTCTAGTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	38043487	38062869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_38043530_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ENSMUST00000096109.11	chr16	-	993	6	FSM	ENSMUSG00000023791.19	ENSMUST00000096109.11	993	6	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_3	17.8258239641258	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTAACTGGTTAGTTTG	NA	False	NA	-8	True	AATAAA	-22	NA	31918556	31903241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918287
ENSMUST00000096199.5	chr16	-	1136	7	FSM	ENSMUSG00000022822.17	ENSMUST00000096199.5	1136	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	91.9287163452688	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTATTTACTGCTG	NA	False	NA	-9	True	AATAAA	-17	NA	20245104	20219510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_20219822_20221009_20221085_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ENSMUST00000096222.12	chr14	+	3508	5	FSM	ENSMUSG00000021767.20	ENSMUST00000096222.12	3508	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	53.8162382557533	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGATAAGAAAGAAATAAAAG	NA	False	NA	NA	False	NA	NA	NA	21550920	21671469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_21551147_21566693_21567567_21659821_21659931_21668958_21669075_21669285
ENSMUST00000096239.7	chr19	+	2753	9	FSM	ENSMUSG00000071645.7	ENSMUST00000096239.7	2753	9	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_7	18.3234822018087	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTTCTTTTGCATAC	1357	False	NA	11	True	AATAAA	-26	NA	8931210	8943574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
ENSMUST00000096240.3	chr19	+	3135	18	FSM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_3	72.954410564141	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCAGCTATTCTGTGTG	3469	False	NA	20	True	AATAAA	-24	NA	8919238	8929667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ENSMUST00000096243.7	chr19	+	1603	5	FSM	ENSMUSG00000071649.7	ENSMUST00000096243.7	1603	5	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	18.060661671157	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTCATGGTTTCCTTC	4712	False	NA	19	True	AATAAA	-16	NA	8897737	8904600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8898013_8899169_8899345_8902901_8903263_8903445_8903737_8904099
ENSMUST00000096246.5	chr19	+	3860	25	FSM	ENSMUSG00000071650.7	ENSMUST00000096246.5	3860	25	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_6	273.686404967234	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	1893	False	NA	-56	True	GATAAA	-42	NA	8875464	8894036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ENSMUST00000096249.7	chr19	+	3274	2	FSM	ENSMUSG00000071652.9	ENSMUST00000096249.7	3274	2	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	0	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCAGTGTTTCTATCTG	NA	False	NA	20	True	AATAAA	-21	NA	8870368	8875252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8870513_8872122
ENSMUST00000096253.7	chr19	-	821	2	FSM	ENSMUSG00000071654.7	ENSMUST00000096253.7	821	2	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_1	0	2449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTGGAAAGACCATCTC	NA	False	NA	-8	True	AATGAA	-25	NA	8858287	8857377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8857981_8858069
ENSMUST00000096255.7	chr19	+	1127	8	FSM	ENSMUSG00000071655.13	ENSMUST00000096255.7	1127	8	0	0	0	0	multi-exon	FALSE	canonical	3	1115	junction_3	101.556257657457	1766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGCTCCTTCCAGA	6013	False	NA	33	True	AATAAA	-21	NA	8849023	8853028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ENSMUST00000096261.5	chr19	-	890	8	FSM	ENSMUSG00000071662.5	ENSMUST00000096261.5	890	8	0	0	0	0	multi-exon	FALSE	canonical	3	1319	junction_5	79.6292429106959	5555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTGGTTTTATGT	NA	False	NA	-1	True	ATTAAA	-17	NA	8775941	8770490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
ENSMUST00000096272.11	chr16	-	2663	4	FSM	ENSMUSG00000065979.13	ENSMUST00000096272.11	2663	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	6.59966329107444	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAATAAAAAACAA	NA	False	NA	-40	True	NA	NA	NA	11727287	11621584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_11623448_11646038_11646462_11705441_11705661_11727129
ENSMUST00000096316.4	chrX	-	892	7	FSM	ENSMUSG00000031388.15	ENSMUST00000096316.4	892	7	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_1	37.306910292271	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTCCTGGGGAGGTACT	NA	False	NA	NA	False	ACTAAA	-29	NA	72965434	72961079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ENSMUST00000096321.3	chrX	+	2779	4	FSM	ENSMUSG00000072969.3	ENSMUST00000096321.3	2779	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_3	8.05536398239638	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACATTGTTCCAGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	134643481	134648071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134645667
ENSMUST00000096348.10	chrX	-	4151	23	FSM	ENSMUSG00000025665.17	ENSMUST00000096348.10	4151	23	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_4	39.3304500040447	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	-6	True	ATTAAA	-31	NA	110372892	110297888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ENSMUST00000096368.4	chrX	+	2491	1	FSM	ENSMUSG00000071723.8	ENSMUST00000096368.4	2491	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTTTGAATAATGCT	4256	False	NA	22	True	AATAAA	-28	NA	93679674	93682165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_93679700_93682200
ENSMUST00000096427.6	chr1	+	789	1	FSM	ENSMUSG00000090489.4	ENSMUST00000096427.6	789	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACACTGAGTTTTCTGT	5735	False	NA	NA	False	AAAAAG	-36	NA	93349421	93350210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_93349400_93350200
ENSMUST00000096447.9	chrX	-	1773	6	FSM	ENSMUSG00000023074.12	ENSMUST00000096447.9	1773	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	3.77359245282264	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCCTAAGCACAACGACT	NA	False	NA	NA	False	AATAAA	-20	NA	52459379	52433884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_52434867_52436580_52436743_52444532_52444751_52446286_52446363_52446450_52446705_52459298
ENSMUST00000096482.10	chr15	-	3118	10	FSM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	0	0	0	0	multi-exon	TRUE	canonical	3	163	junction_7	20.0690167197789	501	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGAGCTGCTTTTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	9140452	9112072	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518_9139791_9140270
ENSMUST00000096573.4	chr18	-	710	4	FSM	ENSMUSG00000024352.13	ENSMUST00000096573.4	710	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	13.2748718344933	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTTATCCCATTT	NA	False	NA	-1	True	NA	NA	NA	35795239	35793068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_35793407_35793496_35793628_35793844_35793911_35795064
ENSMUST00000096639.12	chr7	-	2249	9	FSM	ENSMUSG00000070426.13	ENSMUST00000096639.12	2249	9	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_4	49.7203114933927	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCTTTTTTTTTTTGCC	NA	False	NA	0	True	AATAAA	-34	NA	101714365	101668343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
ENSMUST00000096744.8	chr7	+	2813	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	308.5	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGACTCATGCTTTCT	230	False	NA	14	True	AATATA	-8	NA	3339058	3347865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3339156_3341727_3341816_3345237
ENSMUST00000096751.11	chr19	-	3509	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGCATCTTAGAAATT	1885	False	NA	-13	True	AATAAA	-11	NA	8796697	8786438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
ENSMUST00000096990.10	chr16	-	1747	18	FSM	ENSMUSG00000000028.16	ENSMUST00000096990.10	1747	18	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_15	122.52143375795	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630376	18599202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18629138_18629232_18630054_18630115_18630264
ENSMUST00000097014.7	chr15	-	1803	4	FSM	ENSMUSG00000072235.7	ENSMUST00000097014.7	1803	4	0	0	0	0	multi-exon	FALSE	canonical	3	1268	junction_3	1593.04014038846	7919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTGTGTTCTATATT	NA	False	NA	-4	True	AATAAA	-19	NA	98851584	98847717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851331
ENSMUST00000097175.5	chr16	+	1948	7	FSM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	0	0	0	0	multi-exon	FALSE	canonical	3	478	junction_4	51.0968579160098	2087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCAGCTCACTCGCCTG	NA	False	NA	NA	False	AATACA	-17	NA	48130839	48140086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
ENSMUST00000097193.3	chr1	+	787	3	FSM	ENSMUSG00000058267.14	ENSMUST00000097193.3	787	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1371.5	4217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAAAGTATGGTCTTTC	NA	False	NA	9	True	AATAAA	-9	NA	160022872	160027382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160023116_160024515_160024675_160026997
ENSMUST00000097299.10	chr17	+	1206	4	FSM	ENSMUSG00000044279.16	ENSMUST00000097299.10	1206	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	33.4099120355355	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTAGCTGTAAGCTCTT	1526	False	NA	NA	False	AATAAA	-31	NA	57369230	57372918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089
ENSMUST00000097317.10	chr17	-	1931	13	FSM	ENSMUSG00000023942.16	ENSMUST00000097317.10	1931	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	734.773547881704	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906829	45896128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906803
ENSMUST00000097336.5	chr17	-	415	4	FSM	ENSMUSG00000073412.7	ENSMUST00000097336.5	415	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.24721912892465	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCTTCTCTATATGTGT	NA	False	NA	NA	False	AGTAAA	-22	NA	35407415	35404070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35404287_35405560_35405581_35405921_35406018_35407332
ENSMUST00000097343.11	chr17	+	1607	11	FSM	ENSMUSG00000024369.17	ENSMUST00000097343.11	1607	11	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_1	144.013228559046	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTGTTATTGTAACTGC	32	False	NA	NA	False	AAAAAG	-10	NA	35069366	35075345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35069651_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ENSMUST00000097352.11	chr17	+	4252	11	FSM	ENSMUSG00000006705.14	ENSMUST00000097352.11	4252	11	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	23.0781281736626	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTGATTCTGTAAAGCTT	NA	False	NA	29	True	ATTAAA	-22	NA	31783707	31826667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ENSMUST00000097464.4	chr1	-	3186	20	FSM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_16	22.3000192539325	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAGGACGGAATGGCA	NA	False	NA	NA	False	NA	NA	NA	172125631	172105649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ENSMUST00000097526.3	chr1	+	2589	3	FSM	ENSMUSG00000050565.17	ENSMUST00000097526.3	2589	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	41.5	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTGGCTTTTGTCTCTT	NA	False	NA	10	True	AATAAA	-19	NA	155916662	155929482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_155916749_155916820_155916881_155927039
ENSMUST00000097535.11	chr1	-	1956	3	FSM	ENSMUSG00000073538.11	ENSMUST00000097535.11	1956	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	43	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAGAAAAAATATAA	NA	False	NA	NA	False	AATAAA	-5	NA	153284175	153280572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_153282348_153283347_153283436_153284082
ENSMUST00000097536.6	chr1	+	1737	3	FSM	ENSMUSG00000008475.14	ENSMUST00000097536.6	1737	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTAACTCTCCAGTTA	NA	False	NA	100	True	AATAAA	-35	NA	152642292	152651348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_152642619_152644611_152644685_152650010
ENSMUST00000097543.8	chr1	+	3337	14	FSM	ENSMUSG00000023150.15	ENSMUST00000097543.8	3337	14	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	362.778266997786	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151220268	151240166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUST00000097547.10	chr1	-	2851	13	FSM	ENSMUSG00000006010.15	ENSMUST00000097547.10	2851	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	38.2014942988709	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTAATGTGGAATTTTA	951	False	NA	NA	False	AATAAA	-13	NA	150268513	150237063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ENSMUST00000097597.7	chr1	-	1913	13	FSM	ENSMUSG00000036086.17	ENSMUST00000097597.7	1913	13	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_12	65.8438282773885	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATATGTGTGATTGGTG	NA	False	NA	NA	False	AATAAA	-15	NA	128030784	127914846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_127915137_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128030704
ENSMUST00000097626.10	chr18	-	3005	21	FSM	ENSMUSG00000003778.15	ENSMUST00000097626.10	3005	21	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_13	121.034540524596	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTGTGTATATATAACA	NA	False	NA	-34	True	NA	NA	NA	34757654	34732911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ENSMUST00000097642.4	chr1	-	438	3	FSM	ENSMUSG00000073616.11	ENSMUST00000097642.4	438	3	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_1	1	4326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGCTTTTAGATGCA	NA	False	NA	-19	True	AATAAA	-30	NA	92569707	92564866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_92565126_92567408_92567482_92569601
ENSMUST00000097646.5	chr18	+	1065	5	FSM	ENSMUSG00000024273.9	ENSMUST00000097646.5	1065	5	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_2	17.066048165876	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAATGGTAGTATTTAATT	359	False	NA	17	True	GATAAA	-14	NA	24603925	24610855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_24604038_24604118_24604142_24606006_24606207_24608581_24608782_24610325
ENSMUST00000097649.10	chr1	+	3645	8	FSM	ENSMUSG00000026305.16	ENSMUST00000097649.10	3645	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	18.7823190848223	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTACTGGTTGTTCTG	NA	False	NA	4	True	AATAAA	-18	NA	90981175	91045037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91042317
ENSMUST00000097672.4	chr1	+	901	4	FSM	ENSMUSG00000073633.10	ENSMUST00000097672.4	901	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.3536509852382	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTCTGGTTTGTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	84817561	84878208	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_84817690_84858812_84858922_84874210_84874384_84877717
ENSMUST00000097698.5	chr1	-	932	7	FSM	ENSMUSG00000026189.14	ENSMUST00000097698.5	932	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	105.091494528445	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-45	NA	72323418	72306154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_72306330_72306565_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
ENSMUST00000097699.3	chr1	+	826	3	FSM	ENSMUSG00000073652.11	ENSMUST00000097699.3	826	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGGTGTCAGTAGTCAT	NA	False	NA	NA	False	AGTAAA	-28	NA	71691995	71696616	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_71692179_71692315_71692546_71696203
ENSMUST00000097709.11	chr1	-	2302	9	FSM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_5	91.7393556495793	1879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTATTATGTGTTTTTA	NA	False	NA	-6	True	ATTAAA	-28	NA	65218340	65197774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148
ENSMUST00000097715.4	chr19	-	1398	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	27.5	6072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGACAGTGTAGGGTC	NA	False	NA	NA	False	NA	NA	NA	44994881	44993267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44994380_44994501_44994609_44994702
ENSMUST00000097732.11	chr1	-	1754	7	FSM	ENSMUSG00000048495.17	ENSMUST00000097732.11	1754	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	15.6178316890235	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATTGGTGGAGTGGCCG	NA	False	NA	-18	True	AATAAA	-43	NA	57445630	57427398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57433251_57435885_57435956_57440546_57440683_57445542
ENSMUST00000097737.5	chr4	-	1243	8	FSM	ENSMUSG00000051557.16	ENSMUST00000097737.5	1243	8	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_3	43.9103911276089	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9080	False	NA	NA	False	AATAAA	-14	NA	155976238	155973318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
ENSMUST00000097747.9	chr4	+	1479	3	FSM	ENSMUSG00000073684.14	ENSMUST00000097747.9	1479	3	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	4.5	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTTTCCTTCATAG	NA	False	NA	5	True	NA	NA	NA	155334459	155341141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155335108_155335212_155335494_155340591
ENSMUST00000097781.11	chr4	+	2816	25	FSM	ENSMUSG00000017264.17	ENSMUST00000097781.11	2816	25	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	122.740912483256	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAAAGATGGTTCTTGG	NA	False	NA	NA	False	ATTAAA	-14	NA	148642911	148666850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657487_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ENSMUST00000097788.11	chr4	+	2652	12	FSM	ENSMUSG00000029009.18	ENSMUST00000097788.11	2652	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	31.6729151439997	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGGAGGCTTGCTCTTG	NA	False	NA	18	True	AAGAAA	-32	NA	148123533	148140663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_148123590_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ENSMUST00000097836.10	chr4	+	3113	12	FSM	ENSMUSG00000028759.14	ENSMUST00000097836.10	3113	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	20.9126479187884	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCCAGTACCTGTCCT	4565	False	NA	42	True	AATAAA	-40	NA	137943937	137970481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_137944052_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUST00000097856.10	chr4	-	1863	8	FSM	ENSMUSG00000028878.12	ENSMUST00000097856.10	1863	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	31.9367998345712	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGGATCTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	132649804	132627561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
ENSMUST00000097874.9	chr4	+	1992	9	FSM	ENSMUSG00000028793.16	ENSMUST00000097874.9	1992	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	45.8214946831724	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATGTCACTGTCCTTGG	NA	False	NA	16	True	AATAAA	-19	NA	128952606	128978319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_128952690_128965529_128965736_128967291_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
ENSMUST00000097911.9	chr4	-	4550	22	FSM	ENSMUSG00000033326.16	ENSMUST00000097911.9	4550	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	19.1806071752168	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTGACTGTGGTCTGCC	NA	False	NA	-3	True	AATAAA	-14	NA	118036851	117994155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034761_118036798
ENSMUST00000097912.8	chr4	-	2143	11	FSM	ENSMUSG00000028538.13	ENSMUST00000097912.8	2143	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	21.8286508973871	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	1894	False	NA	-7	True	AATAAA	-12	NA	117992079	117789356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991930
ENSMUST00000097958.3	chr7	-	1990	10	FSM	ENSMUSG00000025494.9	ENSMUST00000097958.3	1990	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	46.3395945676196	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140680459	140671087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140675231_140680391
ENSMUST00000097961.9	chr4	+	3079	15	FSM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	55.2805922322746	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGCGTGTATTTCTT	NA	False	NA	18	True	ATTAAA	-18	NA	99603901	99651697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ENSMUST00000097992.10	chr4	+	5791	44	FSM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_35	26.0666035463672	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTGACTTTTATTTT	NA	False	NA	10	True	AGTAAA	-19	NA	88012866	88329243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ENSMUST00000098036.9	chr7	-	1571	14	FSM	ENSMUSG00000030720.17	ENSMUST00000098036.9	1571	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	40.0146422904558	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182362	126171257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126180817_126180915_126181935_126182015_126182171
ENSMUST00000098060.5	chr7	-	3102	19	FSM	ENSMUSG00000030766.16	ENSMUST00000098060.5	3102	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	64.8370226504336	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969109	122878493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ENSMUST00000098068.10	chr7	-	3750	13	FSM	ENSMUSG00000044702.14	ENSMUST00000098068.10	3750	13	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_9	28.0835806121655	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTTGTTCTATTTT	NA	False	NA	0	True	AATAAA	-20	NA	121732169	121706484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ENSMUST00000098143.11	chr4	+	4594	24	FSM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_17	193.960434840598	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATTTTGTTTATTGAG	6045	False	NA	34	True	ATTAAA	-19	NA	40970905	41025993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ENSMUST00000098180.10	chr7	+	3827	8	FSM	ENSMUSG00000072244.12	ENSMUST00000098180.10	3827	8	0	0	0	0	multi-exon	FALSE	canonical	2	421	junction_3	109.572825470701	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGAGACTTGAAGGTGCA	NA	False	NA	NA	False	AATAAA	-18	NA	103868001	103884359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
ENSMUST00000098230.11	chr7	-	1269	2	FSM	ENSMUSG00000073982.12	ENSMUST00000098230.11	1269	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCTCCCTATGTG	6360	False	NA	-2	True	AATAAA	-18	NA	101899330	101888329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_101889520_101899251
ENSMUST00000098238.9	chr4	+	4407	11	FSM	ENSMUSG00000028248.16	ENSMUST00000098238.9	4407	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	139.12569856069	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTGCTGGCTATGA	-4	True	NA	10	True	AATAAA	-10	NA	21848054	21876467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_21848140_21854244_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ENSMUST00000098300.6	chr7	+	2039	13	FSM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_8	19.8289560996034	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCACATTCACTTTCCT	NA	False	NA	63	True	NA	NA	NA	97020812	97041392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUST00000098378.9	chr7	+	2776	9	FSM	ENSMUSG00000074071.12	ENSMUST00000098378.9	2776	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	48.9283596189367	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAGGACTTTCAAGGT	NA	False	NA	53	True	AATAAA	-24	NA	67949860	68012835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_67949872_67950578_67950712_67954299_67954400_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
ENSMUST00000098407.3	chr16	+	1998	4	FSM	ENSMUSG00000053062.17	ENSMUST00000098407.3	1998	4	0	0	0	0	multi-exon	FALSE	canonical	3	4189	junction_2	31.1555238547945	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTCTTCAGAATAAACAT	NA	False	NA	NA	False	NA	NA	NA	84571273	84607884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231
ENSMUST00000098414.5	chr7	-	3053	4	FSM	ENSMUSG00000074093.5	ENSMUST00000098414.5	3053	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	8.05536398239638	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGCAAGAGTTAGATGCA	NA	False	NA	-19	True	AATAAA	-17	NA	51655766	51646918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_51649526_51653093_51653208_51653682_51653734_51655485
ENSMUST00000098444.9	chr8	+	1273	3	FSM	ENSMUSG00000005699.17	ENSMUST00000098444.9	1273	3	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	3	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGGTCCTTCTGTGTC	NA	False	NA	11	True	ATTAAA	-17	NA	106427785	106430125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106427950_106428805_106429029_106429239
ENSMUST00000098461.10	chr7	-	1227	8	FSM	ENSMUSG00000030798.16	ENSMUST00000098461.10	1227	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	15.6426940630769	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTGGTAAAAA	4419	False	NA	-13	True	AATAAA	-25	NA	44888264	44883055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44883403_44884107_44884192_44884830_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
ENSMUST00000098473.11	chr8	-	8390	49	FSM	ENSMUSG00000036550.17	ENSMUST00000098473.11	8390	49	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_30	244.612610932232	2030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGAGCCACCATGTGG	NA	False	NA	NA	False	NA	NA	NA	96534090	96446078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ENSMUST00000098478.7	chr7	+	1550	15	FSM	ENSMUSG00000002963.18	ENSMUST00000098478.7	1550	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	63.3371686987626	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCACAGCCATCTTGCTGG	9518	False	NA	14	True	AATAAA	-16	NA	44506765	44512073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUST00000098559.3	chr7	+	470	6	FSM	ENSMUSG00000074199.8	ENSMUST00000098559.3	470	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	10.9105453575887	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTCTGTCCTTATC	NA	False	NA	23	True	AATAAA	-28	NA	30487329	30490522	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30487448_30488929_30488969_30489137_30489180_30489336_30489382_30489992_30490041_30490344
ENSMUST00000098578.10	chr8	-	2119	10	FSM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_9	31.8437543540021	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCTGGAATTAAAATCT	NA	False	NA	NA	False	NA	NA	NA	84997009	84984423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ENSMUST00000098594.4	chr7	+	393	4	FSM	ENSMUSG00000074218.4	ENSMUST00000098594.4	393	4	0	0	0	0	multi-exon	FALSE	canonical	3	920	junction_1	139.802241279125	4309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTCCAGCCTGTGTGT	5674	False	NA	24	True	AATAAA	-25	NA	29883568	29885455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_29883671_29884509_29884597_29884699_29884785_29885336
ENSMUST00000098666.9	chr7	-	3656	8	FSM	ENSMUSG00000074272.11	ENSMUST00000098666.9	3656	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	11.2122382116278	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCACTTTGTGGGGTTTTC	2848	False	NA	-1	True	AATAAA	-21	NA	25177028	25161131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_25163326_25164273_25164306_25165741_25165863_25171222_25171499_25173222_25173478_25173944_25174230_25175768_25176129_25176895
ENSMUST00000098674.6	chr9	-	883	6	FSM	ENSMUSG00000074269.11	ENSMUST00000098674.6	883	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	244.73054570282	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACAGGTGAATCCACT	9050	False	NA	17	True	AATAAA	-40	NA	58648842	58560138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_58560390_58565039_58565127_58567456_58567655_58573115_58573200_58619298_58619389_58648669
ENSMUST00000098780.10	chr7	-	2022	14	FSM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_7	27.4902887640592	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTAGTGTGTGATTCAA	2760	False	NA	-1	True	AATAAA	-18	NA	18644340	18624807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
ENSMUST00000098801.9	chr7	+	934	5	FSM	ENSMUSG00000074365.14	ENSMUST00000098801.9	934	5	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	373.339992500134	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTGCTTTAAAAGAAAAT	NA	False	NA	-11	True	AATAAA	-24	NA	15630048	15637945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_15630183_15631328_15631478_15632369_15632542_15636774_15636933_15637624
ENSMUST00000098814.13	chr7	+	3091	28	FSM	ENSMUSG00000056394.21	ENSMUST00000098814.13	3091	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	267.791767474326	3215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2620	False	NA	30	True	AATAAA	-18	NA	13012751	13045350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ENSMUST00000098853.9	chr7	+	2189	9	FSM	ENSMUSG00000059851.16	ENSMUST00000098853.9	2189	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	214.33585648463	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	583	False	NA	16	True	ATTAAA	-17	NA	4743113	4750513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_4743181_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ENSMUST00000098937.10	chr9	-	1673	9	FSM	ENSMUSG00000066839.13	ENSMUST00000098937.10	1673	9	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_8	44.5222907654132	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5896	False	NA	-9	True	AATAAA	-15	NA	21996723	21983541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996644
ENSMUST00000098941.5	chr3	+	1338	8	FSM	ENSMUSG00000028049.16	ENSMUST00000098941.5	1338	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	394.282971004949	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACCCATTTCCTGTAT	NA	False	NA	16	True	ATTAAA	-20	NA	89084826	89090070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89089232_89089351_89089605
ENSMUST00000098942.6	chr9	-	1366	5	FSM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_4	159.647071692531	6537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGTGTGCAG	NA	False	NA	NA	False	NA	NA	NA	21671599	21666737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671414
ENSMUST00000098971.11	chr2	+	4307	33	FSM	ENSMUSG00000038685.19	ENSMUST00000098971.11	4307	33	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_30	51.0130095998805	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961531	180998409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716
ENSMUST00000098990.10	chr3	-	2799	8	FSM	ENSMUSG00000074513.10	ENSMUST00000098990.10	2799	8	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_6	7.88954358370519	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGCCCTGTCCTTAT	NA	False	NA	-3	True	ATTAAA	-16	NA	84489841	84403399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84455240_84455343_84489720
ENSMUST00000098994.7	chr9	+	583	4	FSM	ENSMUSG00000048758.15	ENSMUST00000098994.7	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2179.51131117862	2360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGATGACCAGTGTC	NA	False	NA	-57	True	NA	NA	NA	106306736	106308707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_106306776_106307174_106307214_106307506_106307572_106308267
ENSMUST00000099009.9	chr2	+	3823	5	FSM	ENSMUSG00000078894.10	ENSMUST00000099009.9	3823	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	24.8432586429397	451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTGGGATAGAC	3035	False	NA	NA	False	AATAAA	-25	NA	175968361	175982121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_175968480_175971917_175971973_175977111_175977239_175977443_175977505_175978659
ENSMUST00000099106.10	chr3	+	603	5	FSM	ENSMUSG00000074604.10	ENSMUST00000099106.10	603	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.68954408012983	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGCTGTGGCTTTGTGG	8625	False	NA	NA	False	AATAAA	-15	NA	51568599	51590096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_51568728_51571931_51572032_51584985_51585057_51589217_51589300_51589874
ENSMUST00000099151.6	chr3	+	2057	1	FSM	ENSMUSG00000074637.8	ENSMUST00000099151.6	2057	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2468	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCCTGAGTCTTTCATT	4607	False	NA	19	True	AATAAA	-24	NA	34704553	34706610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_34704600_34706600
ENSMUST00000099173.11	chr2	-	2542	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	0	0	0	0	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	39078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATTGCTTTTGTGTGTT	3632	False	NA	-8	True	AATAAA	-32	NA	154734855	154713329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ENSMUST00000099223.11	chr3	-	2512	7	FSM	ENSMUSG00000027534.17	ENSMUST00000099223.11	2512	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	44.7837396086273	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGAGTGTTATCAGTGTC	NA	False	NA	2	True	AATAAA	-27	NA	10505162	10482876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_10484284_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ENSMUST00000099224.10	chr2	+	4206	13	FSM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_1	32.1674222709181	3406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCATGCAGCCTGAGCAA	NA	False	NA	19	True	AATAAA	-20	NA	152068758	152123772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ENSMUST00000099272.3	chr5	+	1067	6	FSM	ENSMUSG00000041453.13	ENSMUST00000099272.3	1067	6	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	5077.72757835629	43404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146770011	146772796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUST00000099304.4	chr2	-	2127	13	FSM	ENSMUSG00000039033.12	ENSMUST00000099304.4	2127	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	26.3739138796905	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGTGTGACTGCTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	139908705	139675399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_139676368_139699621_139699696_139725691_139725803_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ENSMUST00000099353.6	chr19	+	1657	4	FSM	ENSMUSG00000025066.11	ENSMUST00000099353.6	1657	4	0	0	0	0	multi-exon	FALSE	canonical	3	1732	junction_1	59.801523577767	3979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCATATCCTTATTTC	NA	False	NA	68	True	ACTAAA	-21	NA	47720120	47724027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_47720261_47721068_47721428_47721957_47722351_47723262
ENSMUST00000099356.10	chr13	+	4101	8	FSM	ENSMUSG00000074794.11	ENSMUST00000099356.10	4101	8	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_5	15.8461995701281	334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGCAGTTTATTTGA	NA	False	NA	30	True	AATAAA	-30	NA	81031528	81044161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_81032049_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
ENSMUST00000099362.11	chr2	-	3196	21	FSM	ENSMUSG00000074796.11	ENSMUST00000099362.11	3196	21	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_7	21.856063231973	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539439	130526032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278
ENSMUST00000099384.4	chr13	+	2407	16	FSM	ENSMUSG00000057649.7	ENSMUST00000099384.4	2407	16	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_6	21.3306248280625	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCCCGTCCGCTTTGATG	NA	False	NA	29	True	AATAAA	-26	NA	74085956	74109014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ENSMUST00000099431.6	chr14	-	468	1	FSM	ENSMUSG00000063556.6	ENSMUST00000099431.6	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6564	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGAGTCCAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	77489754	77489286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_77489300_77489800
ENSMUST00000099443.11	chr19	+	2573	12	FSM	ENSMUSG00000018820.14	ENSMUST00000099443.11	2573	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	33.3877792261314	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTCAGGTCTCCT	NA	False	NA	7	True	AATAAA	-14	NA	42159032	42180156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_42159108_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
ENSMUST00000099444.10	chr13	-	2288	14	FSM	ENSMUSG00000021461.18	ENSMUST00000099444.10	2288	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	30.2197082916227	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGAGTCCTTGTCCTCCT	NA	False	NA	-1	True	AGTAAA	-18	NA	63579508	63459948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63579263
ENSMUST00000099449.4	chr13	+	2571	4	FSM	ENSMUSG00000074867.5	ENSMUST00000099449.4	2571	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	97.7422915403335	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAGAATCCACA	NA	False	NA	NA	False	NA	NA	NA	62277729	62321233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_62277843_62317255_62317383_62317567_62317629_62318963
ENSMUST00000099475.12	chr2	+	525	3	FSM	ENSMUSG00000074884.13	ENSMUST00000099475.12	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	2874	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGAGCGCCTGGTTTG	NA	False	NA	-3	True	ATTAAA	-14	NA	121279863	121281535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121279923_121280455_121280565_121281178
ENSMUST00000099484.9	chr5	+	451	3	FSM	ENSMUSG00000066613.15	ENSMUST00000099484.9	451	3	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	18.5	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCCAGGTGTCTGATT	8371	False	NA	NA	False	NA	NA	NA	110144387	110155333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_110144500_110154809_110154937_110155121
ENSMUST00000099489.9	chr2	+	1632	10	FSM	ENSMUSG00000023572.17	ENSMUST00000099489.9	1632	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_5	15.8464857653396	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTCCTCTGAAGT	NA	False	NA	21	True	AATAAA	-30	NA	120838928	120847385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
ENSMUST00000099496.4	chr13	-	1678	13	FSM	ENSMUSG00000025878.17	ENSMUST00000099496.4	1678	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	37.4398591818339	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATCTTATTTCAATAG	NA	False	NA	NA	False	AATATA	-12	NA	55248113	55176107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ENSMUST00000099529.9	chr2	-	4813	26	FSM	ENSMUSG00000034032.16	ENSMUST00000099529.9	4813	26	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_25	84.4691091464803	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGACTGTTTTGTCACAT	473	False	NA	-1	True	AATAAA	-21	NA	119618009	119594439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
ENSMUST00000099538.6	chr10	+	1874	4	FSM	ENSMUSG00000020265.17	ENSMUST00000099538.6	1874	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	598.245397437837	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGCCTATGTTAAAC	NA	False	NA	25	True	AGTAAA	-18	NA	77442404	77453256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_77442803_77445645_77445775_77449813_77449886_77451981
ENSMUST00000099554.5	chr16	-	1333	5	FSM	ENSMUSG00000022978.12	ENSMUST00000099554.5	1333	5	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	13.865424623862	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGGTTTTTTTTTT	NA	False	NA	0	True	AATAAA	-25	NA	90524292	90516199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_90516867_90517541_90517639_90518523_90518647_90523180_90523248_90523913
ENSMUST00000099571.10	chr10	-	2052	11	FSM	ENSMUSG00000020230.16	ENSMUST00000099571.10	2052	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	3.8262252939418	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTCTGTTTCTGTGCC	NA	False	NA	NA	False	AATAAA	-23	NA	76073699	76043055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121_76061305_76062023_76062150_76072545_76072659_76073583
ENSMUST00000099582.4	chr13	+	962	6	FSM	ENSMUSG00000021420.14	ENSMUST00000099582.4	962	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	98.7886633172046	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAACTGGAGTGTCTG	NA	False	NA	-75	True	NA	NA	NA	36301840	36721483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_36301989_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ENSMUST00000099690.4	chr2	-	2224	15	FSM	ENSMUSG00000075023.12	ENSMUST00000099690.4	2224	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_14	17.5243271145093	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGGCCTGCTTTATTTC	NA	False	NA	0	True	AATAAA	-23	NA	93699502	93685705	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93699366
ENSMUST00000099696.8	chr2	-	1657	9	FSM	ENSMUSG00000027215.14	ENSMUST00000099696.8	1657	9	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	3.52668399491647	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTCTGAAGAGGCGGTA	NA	False	NA	NA	False	ATTAAA	-17	NA	93292756	93249455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475_93260601_93264205_93264279_93267732_93267816_93292674
ENSMUST00000099706.9	chr10	+	3086	9	FSM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	25.5706741209535	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGACGCTGGAGCTTT	NA	False	NA	2	True	AATAAA	-13	NA	61551101	61574426	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361
ENSMUST00000099712.10	chr2	+	5021	19	FSM	ENSMUSG00000040506.17	ENSMUST00000099712.10	5021	19	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	21.1640418320005	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91560478	91749194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ENSMUST00000099820.10	chr13	-	2736	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099820.10	2736	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	22.4152725712726	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGAATGAATACTCTC	NA	False	NA	-20	True	ATTAAA	-11	NA	12476384	12454304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476121
ENSMUST00000099821.10	chr13	-	2792	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099821.10	2792	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	18.5718491337539	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATACTCTCTGGAATA	NA	False	NA	-13	True	ATTAAA	-18	NA	12476619	12454297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476307
ENSMUST00000099934.11	chr10	+	3292	23	FSM	ENSMUSG00000019823.18	ENSMUST00000099934.11	3292	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.6000926775296	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTATGCTCTGTGCTGG	9147	False	NA	31	True	AATAAA	-20	NA	41352363	41363028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_41352537_41354005_41354311_41354969_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ENSMUST00000099937.6	chr16	+	740	5	FSM	ENSMUSG00000075229.12	ENSMUST00000099937.6	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	389.064262044203	4200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTACATATTTATTT	NA	False	NA	16	True	ATTAAA	-13	NA	35901644	35912481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_35901774_35903060_35903187_35905386_35905534_35910270_35910331_35912203
ENSMUST00000099985.6	chr10	-	1532	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	0	0	0	0	multi-exon	FALSE	canonical	3	2101	junction_1	71	7887	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGAGTGATTGTACTACA	NA	False	NA	NA	False	NA	NA	NA	30076556	30072004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_30073223_30074461_30074576_30076356
ENSMUST00000100015.6	chr2	-	905	8	FSM	ENSMUSG00000027108.16	ENSMUST00000100015.6	905	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	132.211333609089	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGTGTTTTGTTCAATG	NA	False	NA	-1	True	AATAAA	-19	NA	73044677	72967870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_72968000_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ENSMUST00000100023.3	chr16	-	3055	2	FSM	ENSMUSG00000051065.10	ENSMUST00000100023.3	3055	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTGTCATTATTACTT	4797	False	NA	0	True	AATAAA	-24	NA	28748425	28644927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_28647762_28748204
ENSMUST00000100028.10	chr2	+	2097	17	FSM	ENSMUSG00000027012.16	ENSMUST00000100028.10	2097	17	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	189.242197659507	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATGGATAATCTGGGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	71042327	71093203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71063992_71064053_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUST00000100036.10	chr10	+	2476	12	FSM	ENSMUSG00000019970.16	ENSMUST00000100036.10	2476	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	266.915376443206	2663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTGTGTCATGTGTTA	NA	False	NA	13	True	AATAAA	-19	NA	21868121	21875797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_21868307_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ENSMUST00000100052.11	chr16	-	3899	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGTCTTGGTGTCTT	2273	False	NA	NA	False	AATATA	-16	NA	21982049	21877758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ENSMUST00000100099.10	chr16	+	2235	12	FSM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	76.7194093342424	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	448	False	NA	8	True	AATAAA	-22	NA	18066925	18071366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18067163_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ENSMUST00000100134.10	chr11	+	1925	13	FSM	ENSMUSG00000025156.18	ENSMUST00000100134.10	1925	13	0	0	0	0	multi-exon	TRUE	canonical	3	682	junction_1	150.079122650539	3165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCCCCAAGGCTCCTTTC	1394	False	NA	-3	True	ATTAAA	-14	NA	120675100	120679923	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
ENSMUST00000100162.5	chr15	+	1676	9	FSM	ENSMUSG00000060992.10	ENSMUST00000100162.5	1676	9	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	173.470458580128	3520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTGTGATGGCTCTGT	NA	False	NA	32	True	AATAAA	-20	NA	103181336	103208295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ENSMUST00000100171.3	chr2	+	2613	8	FSM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	0	0	0	0	multi-exon	FALSE	canonical	3	2314	junction_3	220.40537791135	3094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGGTGTGTCTTTCTT	NA	False	NA	18	True	ACTAAA	-14	NA	34662106	34666543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ENSMUST00000100193.8	chr11	+	2924	10	FSM	ENSMUSG00000059248.14	ENSMUST00000100193.8	2924	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	196.831569283656	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTTTTTTTCTGGAGT	NA	False	NA	86	True	AATAAA	-11	NA	117222545	117253134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_117222680_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUST00000100196.9	chr16	+	1755	13	FSM	ENSMUSG00000039427.15	ENSMUST00000100196.9	1755	13	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_11	10.4029910228848	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGAAGTGTTTGCTCT	1280	False	NA	17	True	AATAAA	-18	NA	5051484	5062767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5062304
ENSMUST00000100215.11	chr2	-	1749	12	FSM	ENSMUSG00000026860.17	ENSMUST00000100215.11	1749	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	118.792269553979	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	-10	True	AATAAA	-16	NA	30249252	30234820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30235440_30235710_30235952_30236070_30236086_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUST00000100220.5	chr2	-	1805	12	FSM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_5	38.9436974393538	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTCTCTAGACCCTGAT	NA	False	NA	-28	True	AATAAA	-15	NA	30068462	30063482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068401
ENSMUST00000100248.6	chr11	-	1375	8	FSM	ENSMUSG00000018727.20	ENSMUST00000100248.6	1375	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	53.4469028903587	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600352	113588997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600053
ENSMUST00000100301.11	chr7	+	3127	18	FSM	ENSMUSG00000078816.11	ENSMUST00000100301.11	3127	18	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_10	8.64845927034781	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGATGTTTTCTTGTA	NA	False	NA	11	True	AATAAA	-22	NA	3352037	3379615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3362648_3362737_3363027_3363058_3367375_3367529_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
ENSMUST00000100339.9	chr14	-	1090	4	FSM	ENSMUSG00000075486.11	ENSMUST00000100339.9	1090	4	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_3	9.8770215933527	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATGACGTGTCTTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	101878122	101871201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_101871829_101874389_101874543_101877723_101877736_101877824
ENSMUST00000100370.2	chr15	-	2270	4	FSM	ENSMUSG00000075511.10	ENSMUST00000100370.2	2270	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	6.97614984548545	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAGGAAAGATGAAG	250	False	NA	NA	False	NA	NA	NA	83251478	83241760	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83243152_83248020_83248130_83249229_83249712_83251190
ENSMUST00000100375.11	chr15	-	3157	8	FSM	ENSMUSG00000041815.15	ENSMUST00000100375.11	3157	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_6	194.457277192347	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGAGCTATAATGTCT	NA	False	NA	-13	True	AATAAA	-15	NA	83033532	83010178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83022332_83022724_83033395
ENSMUST00000100387.11	chr11	+	1876	3	FSM	ENSMUSG00000034757.16	ENSMUST00000100387.11	1876	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	44	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCTTTGTGACTGC	NA	False	NA	16	True	AATAAA	-18	NA	102175764	102180063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_102175915_102178133_102178698_102178901
ENSMUST00000100392.5	chr11	+	2547	10	FSM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_3	21.1502561056204	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTCCCACACCTCCT	NA	False	NA	15	True	AATAAA	-22	NA	102139707	102156013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ENSMUST00000100404.6	chr5	+	4570	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_13	51.6933659344471	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGGCTTCTGTTGTCT	NA	False	NA	14	True	AATAAA	-22	NA	149601694	149686064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ENSMUST00000100410.10	chr5	+	3148	10	FSM	ENSMUSG00000041264.17	ENSMUST00000100410.10	3148	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_9	101.142119787266	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTTGGTTTCATTTT	NA	False	NA	13	True	ATTAAA	-13	NA	149121475	149152241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ENSMUST00000100414.12	chr11	+	1220	6	FSM	ENSMUSG00000078656.12	ENSMUST00000100414.12	1220	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	486.921595331322	3607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCGGCCTGTTACTACT	NA	False	NA	16	True	ATTAAA	-13	NA	101144554	101150371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149595
ENSMUST00000100483.3	chr5	-	1073	4	FSM	ENSMUSG00000029610.14	ENSMUST00000100483.3	1073	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	226.993881464286	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	False	NA	-18	True	AATAAA	-16	NA	143846665	143839521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846518
ENSMUST00000100484.6	chr15	-	1899	15	FSM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	0	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_9	114.082520258677	9663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGTCCTGTGCTCCCGTT	2745	False	NA	-11	True	AATAAA	-24	NA	77855013	77843197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ENSMUST00000100489.4	chr5	-	2325	7	FSM	ENSMUSG00000001847.15	ENSMUST00000100489.4	2325	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	572.095174677159	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGGTTATGCTTGTGT	3466	False	NA	-9	True	AATAAA	-13	NA	143513748	143491236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_143492861_143493081_143493242_143493850_143493914_143495351_143495409_143500423_143500542_143502912_143502985_143513517
ENSMUST00000100496.5	chr14	-	1459	4	FSM	ENSMUSG00000021930.15	ENSMUST00000100496.5	1459	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	60.8075287736277	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTCAGTATTATATTTA	NA	False	NA	NA	False	AATAAA	-13	NA	61794207	61771753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_61772691_61783130_61783298_61787192_61787310_61793969
ENSMUST00000100497.11	chr5	-	1920	6	FSM	ENSMUSG00000029580.15	ENSMUST00000100497.11	1920	6	0	0	0	0	multi-exon	FALSE	canonical	3	4052	junction_3	78.6180640819907	36147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTCTGTGGCTTT	8889	False	NA	-1	True	AATAAA	-27	NA	142892509	142888869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
ENSMUST00000100507.8	chr5	+	2945	19	FSM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	0	0	0	0	multi-exon	TRUE	canonical	3	2428	junction_3	310.145868707844	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCCTGATCTCTT	NA	False	NA	15	True	AATAAA	-16	NA	140405082	140429115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ENSMUST00000100527.13	chr15	-	1881	12	FSM	ENSMUSG00000002524.18	ENSMUST00000100527.13	1881	12	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_7	445.848082194703	2850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTGTGTCTGAAATTGG	NA	False	NA	0	True	CATAAA	-25	NA	75952762	75942030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75946455_75946507_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ENSMUST00000100538.4	chr15	-	3362	12	FSM	ENSMUSG00000075600.4	ENSMUST00000100538.4	3362	12	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	44.618492997359	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTGTCTTGACTACC	NA	False	NA	-1	True	AATAAA	-19	NA	75713764	75626278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
ENSMUST00000100544.11	chr5	-	2858	13	FSM	ENSMUSG00000029722.16	ENSMUST00000100544.11	2858	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	43.0686628794327	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	1810	False	NA	NA	False	NA	NA	NA	137682942	137648746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137658457_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ENSMUST00000100638.4	chr14	+	1234	7	FSM	ENSMUSG00000072571.4	ENSMUST00000100638.4	1234	7	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_4	6.83130051063973	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGACGCCAGGCGCTG	NA	False	NA	23	True	AATAAA	-37	NA	52254321	52257251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_52254399_52254512_52254655_52255207_52255319_52255410_52255468_52255998_52256110_52256188_52256336_52256662
ENSMUST00000100655.5	chr15	-	1341	6	FSM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_4	117.266534015464	5106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTCAGCTGCTCTCAG	NA	False	NA	-9	True	AATAAA	-40	NA	57897711	57885654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895379_57895476_57897479
ENSMUST00000100662.10	chr5	+	1867	8	FSM	ENSMUSG00000056310.15	ENSMUST00000100662.10	1867	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	111.662392039211	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTACTGACTTAGGCTG	4928	False	NA	NA	False	TTTAAA	-5	NA	130285875	130306590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130305829
ENSMUST00000100705.11	chr11	-	1447	3	FSM	ENSMUSG00000018648.16	ENSMUST00000100705.11	1447	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	13.5	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTTATTAATCATTTTG	NA	False	NA	-14	True	AATAAA	-15	NA	83959183	83938866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_83940137_83941657_83941747_83959095
ENSMUST00000100754.5	chr15	+	1002	1	FSM	ENSMUSG00000078300.4	ENSMUST00000100754.5	1002	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	618	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCTGGACCACCCACC	162	False	NA	NA	False	NA	NA	NA	12574974	12575976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_12575000_12576000
ENSMUST00000100799.9	chr14	-	802	4	Antisense	novelGene_ENSMUSG00000012405.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	134764	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAGAGGAAAGGAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	4200736	4198725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr14_-_4198852_4199235_4199418_4199652_4199790_4200379
ENSMUST00000100811.6	chr14	-	1108	4	FSM	ENSMUSG00000072676.13	ENSMUST00000100811.6	1108	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	63.5627424063989	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTCTCTTGATCGTGA	NA	False	NA	-13	True	NA	NA	NA	25927674	25924593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927468
ENSMUST00000100924.5	chr5	+	692	4	FSM	ENSMUSG00000072754.10	ENSMUST00000100924.5	692	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	4.71404520791032	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTCCAGTCCATGTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	110501961	110503960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_110502160_110502356_110502483_110502590_110502717_110503718
ENSMUST00000100937.4	chr5	-	599	3	FSM	ENSMUSG00000072762.10	ENSMUST00000100937.4	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	15.5	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTTGATTAAATTCTCA	7657	False	NA	NA	False	NA	NA	NA	109899752	109886696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_109886877_109887064_109887192_109899460
ENSMUST00000100955.3	chr17	+	879	3	FSM	ENSMUSG00000034345.15	ENSMUST00000100955.3	879	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	535	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTTTTACCCTGGGTAT	1834	False	NA	29	True	ATTAAA	-33	NA	6130204	6135407	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_6130350_6131076_6131150_6134746
ENSMUST00000101014.9	chr11	+	657	4	FSM	ENSMUSG00000060938.15	ENSMUST00000101014.9	657	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6885.97448925471	32557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCATTAAAGACTGCTTA	NA	False	NA	9	True	AAGAAA	-41	NA	68792435	68795336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_68792639_68793095_68793263_68794004_68794146_68795190
ENSMUST00000101049.9	chr11	+	2884	24	FSM	ENSMUSG00000020549.15	ENSMUST00000101049.9	2884	24	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_18	22.4427858997362	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTCAGTGTGGGGTC	NA	False	NA	15	True	AATAAA	-15	NA	64869899	64892426	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ENSMUST00000101070.5	chr6	+	1201	2	FSM	ENSMUSG00000051256.11	ENSMUST00000101070.5	1201	2	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_1	0	2605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTGTTGGAGATTTGAT	NA	False	NA	33	True	AATAAA	-37	NA	113419529	113425190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113419759_113424218
ENSMUST00000101071.4	chr12	-	1299	3	FSM	ENSMUSG00000041359.15	ENSMUST00000101071.4	1299	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	973.5	3110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATTTCTCGTGCTCTTG	NA	False	NA	-10	True	AATAAA	-15	NA	105188975	105183016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_105183961_105184917_105185089_105188791
ENSMUST00000101078.12	chr12	+	1658	5	FSM	ENSMUSG00000079012.12	ENSMUST00000101078.12	1658	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.1643310177918	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGCTCTCAGCTTGCA	4025	False	NA	17	True	AATACA	-26	NA	104304744	104360515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_104304805_104355322_104355972_104357714_104357989_104358900_104359052_104359991
ENSMUST00000101146.4	chr12	+	1913	11	FSM	ENSMUSG00000021007.15	ENSMUST00000101146.4	1913	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	15.3766056072203	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCACATATTTATTAT	NA	False	NA	14	True	NA	NA	NA	98594455	98636071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_98594594_98598221_98598297_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ENSMUST00000101165.9	chr12	+	2158	11	FSM	ENSMUSG00000021044.16	ENSMUST00000101165.9	2158	11	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	14.3544418212622	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGACTGTTCCTTCTCAA	NA	False	NA	10	True	AATAAA	-23	NA	88327323	88428489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_88327366_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUST00000101168.4	chr12	-	1840	2	FSM	ENSMUSG00000079029.3	ENSMUST00000101168.4	1840	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAAGAAAAAGATCAAT	NA	False	NA	NA	False	AATAAA	-16	NA	88241270	88237409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_88239059_88241079
ENSMUST00000101180.8	chrX	+	2029	7	FSM	ENSMUSG00000094378.8	ENSMUST00000101180.8	2029	7	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	4.6785562825394	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	148567468	148609690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_148567561_148582582_148582709_148583428_148583509_148587159_148588119_148601122_148601205_148602010_148602061_148609050
ENSMUST00000101181.5	chrX	+	1977	7	FSM	ENSMUSG00000072923.7	ENSMUST00000101181.5	1977	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.06622805119022	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	148377565	148419760	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_148377658_148394767_148394894_148395612_148395693_148399354_148400266_148411437_148411520_148412325_148412376_148419124
ENSMUST00000101185.10	chrX	+	2023	7	FSM	ENSMUSG00000079387.11	ENSMUST00000101185.10	2023	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.77413381096719	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	147640635	147707135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_147640726_147686432_147686559_147687278_147687359_147690981_147691941_147698819_147698902_147699707_147699758_147706499
ENSMUST00000101186.10	chrX	+	2026	7	FSM	ENSMUSG00000096834.8	ENSMUST00000101186.10	2026	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.30461015427985	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	147446593	147486845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_147446686_147463739_147463866_147464585_147464666_147468313_147469273_147478430_147478513_147479317_147479368_147486208
ENSMUST00000101190.11	chrX	+	1972	8	FSM	ENSMUSG00000096834.8	ENSMUST00000101190.11	1972	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	4.38922614163921	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	147446599	147486845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_147446686_147463739_147463862_147464581_147464666_147468313_147468993_147469040_147469273_147478430_147478513_147479317_147479368_147486208
ENSMUST00000101212.9	chrX	-	1996	9	FSM	ENSMUSG00000072944.12	ENSMUST00000101212.9	1996	9	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_8	135.330151850946	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCTGAACTGGGTTT	NA	False	NA	-9	True	AATAAA	-16	NA	138963317	138907553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963161
ENSMUST00000101251.8	chrX	+	3085	22	FSM	ENSMUSG00000031262.13	ENSMUST00000101251.8	3085	22	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	51.4515821537341	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGTATTTCCGAATTTTT	NA	False	NA	3	True	AATAAA	-14	NA	133208903	133263385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133208978_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ENSMUST00000101293.11	chr11	+	2729	3	FSM	ENSMUSG00000020346.17	ENSMUST00000101293.11	2729	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	25.5	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGTGTGTCCTAGG	NA	False	NA	NA	False	AATAAA	-27	NA	49141338	49153857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_49141483_49142376_49142502_49151397
ENSMUST00000101301.10	chr6	+	2299	15	FSM	ENSMUSG00000052337.16	ENSMUST00000101301.10	2299	15	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_4	278.631248156016	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTAGGAAGAGTTGTGTA	NA	False	NA	NA	False	NA	NA	NA	71808396	71851914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUST00000101340.11	chr11	-	700	6	FSM	ENSMUSG00000020415.17	ENSMUST00000101340.11	700	6	0	0	0	0	multi-exon	FALSE	canonical	3	4089	junction_5	2240.31940579909	15943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGATTGTGAATACTTA	NA	False	NA	-31	True	AATAAA	-15	NA	43317029	43311095	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317000
ENSMUST00000101343.2	chr6	+	1725	5	FSM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_4	68.2692280606717	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAATCAAGCTTTAAAA	NA	False	NA	19	True	AATAAA	-22	NA	66512451	66517975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754
ENSMUST00000101347.10	chr11	-	2053	7	FSM	ENSMUSG00000042032.14	ENSMUST00000101347.10	2053	7	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_6	83.011378068846	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGCTTTATTTTGTA	NA	False	NA	-12	True	AATAAA	-18	NA	40586030	40570140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40585629
ENSMUST00000101354.10	chr5	-	1578	7	FSM	ENSMUSG00000004642.14	ENSMUST00000101354.10	1578	7	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_4	432.7992863005	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCCTATACTGTTTGG	NA	False	NA	-4	True	AATAAA	-22	NA	33809650	33797398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33807086_33807192_33809306_33809424_33809538
ENSMUST00000101362.8	chrX	-	2371	13	FSM	ENSMUSG00000031297.15	ENSMUST00000101362.8	2371	13	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_12	497.596780089618	2616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCAAAAAACCT	NA	False	NA	NA	False	ATTAAA	-12	NA	100128958	100122826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128426_100128585_100128877
ENSMUST00000101367.9	chr6	-	1519	10	FSM	ENSMUSG00000029780.15	ENSMUST00000101367.9	1519	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	89.8419737478734	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGTCCAGATCATAT	9834	False	NA	0	True	AATAAA	-26	NA	56878871	56859384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56874759_56874815_56878822
ENSMUST00000101375.5	chr11	-	966	10	FSM	ENSMUSG00000057113.14	ENSMUST00000101375.5	966	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	6470.30156337304	6017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCCTGGTGTCACTGA	NA	False	NA	-7	True	ATTAAA	-11	NA	33113076	33105327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_33105432_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUST00000101394.5	chr11	-	1315	3	FSM	ENSMUSG00000020309.7	ENSMUST00000101394.5	1315	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	6	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTAAGTGTCATTTCT	NA	False	NA	NA	False	AATAAA	-33	NA	30936350	30926706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_30927747_30929564_30929601_30936111
ENSMUST00000101445.11	chr6	+	2761	5	FSM	ENSMUSG00000045466.19	ENSMUST00000101445.11	2761	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	2.77263412660235	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGTCTTGCCTTGACC	9713	False	NA	18	True	AATAAA	-23	NA	47930323	47942234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_47930517_47932750_47933105_47934409_47934537_47939458_47939567_47940255
ENSMUST00000101486.5	chrX	+	1564	9	FSM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_5	296.174779479955	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCAGACTTGTTGGCA	NA	False	NA	NA	False	AATAAA	-8	NA	72235827	72246526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
ENSMUST00000101499.10	chr12	-	3900	6	FSM	ENSMUSG00000020659.17	ENSMUST00000101499.10	3900	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_4	37.6542162313864	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTAGATGAGTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	31549615	31534934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580_31544749_31549521
ENSMUST00000101504.3	chr4	+	2053	6	FSM	ENSMUSG00000059482.16	ENSMUST00000101504.3	2053	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	54.3485050392373	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCTCTGTGCAATTAT	-5	True	NA	15	True	AATAAA	-19	NA	10874567	10899425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897895
ENSMUST00000101525.9	chr11	+	1157	9	FSM	ENSMUSG00000020407.14	ENSMUST00000101525.9	1157	9	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	904.856126339983	8181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	False	NA	26	True	AATAAA	-20	NA	9068106	9086170	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_9068163_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ENSMUST00000101526.9	chr11	+	1706	5	FSM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	201.26273251648	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGTCCTATTTGG	2416	False	NA	16	True	AATAAA	-26	NA	69886701	69890835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889327_69889959_69890063
ENSMUST00000101531.10	chrX	-	3671	25	FSM	ENSMUSG00000031139.17	ENSMUST00000101531.10	3671	25	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_24	117.379696095856	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59193060	59101315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59192833
ENSMUST00000101547.12	chr13	-	2147	4	FSM	ENSMUSG00000074865.12	ENSMUST00000101547.12	2147	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	18.9267594221045	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62706325	62664610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62666545_62667985_62668047_62668231_62668359_62706300
ENSMUST00000101554.9	chr11	+	4106	23	FSM	ENSMUSG00000020456.18	ENSMUST00000101554.9	4106	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	146.072267860866	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAAGAACAACCACCT	NA	False	NA	-50	True	AAAAAG	-5	NA	6241665	6306578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_6241770_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUST00000101560.4	chrX	+	3738	5	FSM	ENSMUSG00000073176.5	ENSMUST00000101560.4	3738	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	8.6421930087218	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTTCTGATTCTTTTA	NA	False	NA	6	True	AATAAA	-16	NA	55391759	55411034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_55391800_55393642_55394089_55398822_55399028_55407826_55407941_55408101
ENSMUST00000101561.8	chrX	-	951	8	FSM	ENSMUSG00000073177.9	ENSMUST00000101561.8	951	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	4.42165358301205	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATTTTTTGCAATGTTA	NA	False	NA	NA	False	AATAAA	-19	NA	55258241	55235186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_55235530_55239012_55239112_55241930_55242031_55242833_55242952_55246943_55246979_55247366_55247437_55248032_55248151_55258173
ENSMUST00000101588.2	chrX	+	1536	2	FSM	ENSMUSG00000073207.2	ENSMUST00000101588.2	1536	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATATGCCTGTGATTC	NA	False	NA	NA	False	AATAAA	-23	NA	51880076	51888345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_51880203_51886935
ENSMUST00000101615.9	chr11	+	2116	19	FSM	ENSMUSG00000034274.12	ENSMUST00000101615.9	2116	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	70.0920030309371	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTTGTAGCTCCTTGG	NA	False	NA	23	True	ATTAAA	-20	NA	4845319	4878867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_4845379_4849790_4849907_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ENSMUST00000101636.3	chrX	-	817	4	FSM	ENSMUSG00000073243.3	ENSMUST00000101636.3	817	4	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_3	3.74165738677394	519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGCAAATTGAACAAATTTA	NA	False	NA	NA	False	ATTAAA	-12	NA	36474694	36473000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_36473184_36473576_36473674_36473912_36474226_36474470
ENSMUST00000101638.4	chr11	-	3514	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_14	50.0611182012104	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGACAGAGAGTGCCAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	3359174	3294255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
ENSMUST00000101642.10	chr11	-	3693	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGACAGAGAGTGCCAAAG	9814	False	NA	-6	True	AATAAA	-19	NA	3321376	3294255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ENSMUST00000101644.10	chr11	+	1853	4	FSM	ENSMUSG00000020453.18	ENSMUST00000101644.10	1853	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	164.248456782874	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	5180	False	NA	14	True	ATTAAA	-16	NA	3239166	3259083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_3239348_3243279_3243344_3249033_3249206_3257647
ENSMUST00000101694.10	chrX	+	2867	24	FSM	ENSMUSG00000031153.17	ENSMUST00000101694.10	2867	24	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	21.1150418078725	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3273	False	NA	7	True	NA	NA	NA	7656246	7686802	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7669832_7669926_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ENSMUST00000101698.4	chrX	-	1838	2	FSM	ENSMUSG00000073294.5	ENSMUST00000101698.4	1838	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTTGTTGTGGTACAA	NA	False	NA	1	True	AATAAA	-24	NA	5995473	5993272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_5994830_5995192
ENSMUST00000101800.7	chr17	+	1211	4	FSM	ENSMUSG00000075705.14	ENSMUST00000101800.7	1211	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	11.8602979164381	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCGTTTCCGTGTTTGTTG	NA	False	NA	12	True	AATAAA	-12	NA	24955655	24961745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24955737_24958472_24958622_24959053_24959169_24960879
ENSMUST00000101801.8	chr7	+	1191	6	FSM	ENSMUSG00000075701.11	ENSMUST00000101801.8	1191	6	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_5	18.3804243694209	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	False	NA	7	True	AGTAAA	-16	NA	65729396	65739153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737020_65738514
ENSMUST00000102476.5	chr2	+	860	4	FSM	ENSMUSG00000060802.9	ENSMUST00000102476.5	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	12.4721912892465	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTG	NA	False	NA	NA	False	NA	NA	NA	121978166	121983564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121978286_121981353_121981633_121982127_121982157_121983131
ENSMUST00000102483.5	chr11	-	560	5	FSM	ENSMUSG00000058546.9	ENSMUST00000102483.5	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	10927	junction_1	3598.81438810061	214882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGCTTGTCATTTGT	5963	False	NA	-14	True	CATAAA	-1	NA	78074410	78071760	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628_78073813_78074344
ENSMUST00000102487.4	chr4	-	3244	4	FSM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	126.792043213374	1648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGCTTCCTGTCTCAT	NA	False	NA	0	True	AATACA	-31	NA	140867077	140840311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_140843176_140845837_140846093_140847634_140847685_140867002
ENSMUST00000102494.8	chr11	-	3114	7	FSM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_6	27.2457947825593	651	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGACATCCTGTAAATTTA	NA	False	NA	-5	True	AATAAA	-28	NA	76969261	76935117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
ENSMUST00000102496.8	chr2	-	1848	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102496.8	1848	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	68.2800117164606	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	120439796	120434718	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439669
ENSMUST00000102497.10	chr2	-	1962	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102497.10	1962	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	44.5394207416307	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	120439836	120434718	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439595
ENSMUST00000102499.8	chr2	-	1961	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102499.8	1961	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	57.8321709777525	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	120440001	120434718	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439761
ENSMUST00000102500.5	chr11	-	3540	2	FSM	ENSMUSG00000049396.7	ENSMUST00000102500.5	3540	2	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	0	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGCCTTTCTCAGAAG	NA	False	NA	-1	True	AATAAA	-22	NA	76108490	76101396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_76104750_76108303
ENSMUST00000102503.10	chr4	-	1221	8	FSM	ENSMUSG00000028741.14	ENSMUST00000102503.10	1221	8	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_5	119.708489460771	6109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTTGTTGTTT	5696	False	NA	-2	True	AATAAA	-44	NA	139079887	139074745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
ENSMUST00000102505.10	chr11	+	4652	32	FSM	ENSMUSG00000017774.20	ENSMUST00000102505.10	4652	32	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	55.4580209849872	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	7837	False	NA	15	True	AATAAA	-19	NA	75541329	75564736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_75541591_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ENSMUST00000102508.10	chr4	+	1674	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	0	0	0	0	multi-exon	FALSE	canonical	3	1402	junction_1	117.624136553685	4183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCGCTGGCTGTACGTTC	NA	False	NA	8	True	NA	NA	NA	138920209	139019129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
ENSMUST00000102510.8	chr11	+	7249	43	FSM	ENSMUSG00000020850.15	ENSMUST00000102510.8	7249	43	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	167.072261580339	1883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCTTGCTGTTATG	NA	False	NA	20	True	AATAAA	-17	NA	75377645	75400275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_75377716_75377906_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ENSMUST00000102515.10	chr3	-	4347	10	FSM	ENSMUSG00000005034.16	ENSMUST00000102515.10	4347	10	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	11.8415464455544	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTGAGTCTTCTGTCCG	2698	False	NA	NA	False	ATTAAA	-20	NA	146518715	146435328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146518392
ENSMUST00000102525.11	chr5	+	899	7	FSM	ENSMUSG00000029465.15	ENSMUST00000102525.11	899	7	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_4	26.4638117687784	6316	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACTGTACCGTGTATG	4488	False	NA	38	True	ATTAAA	-22	NA	122529940	122544242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_122530061_122534879_122534980_122539709_122539787_122541421_122541491_122542186_122542314_122543146_122543242_122543931
ENSMUST00000102529.10	chr9	-	2875	18	FSM	ENSMUSG00000057969.16	ENSMUST00000102529.10	2875	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	14.4607809903619	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGGAATGGCCCCAGC	8158	False	NA	-24	True	AATAAA	-14	NA	107482601	107475553	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482470
ENSMUST00000102532.10	chr9	-	3191	20	FSM	ENSMUSG00000057969.16	ENSMUST00000102532.10	3191	20	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_18	17.1961150028469	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGCTGGTTCCAGTGAG	4331	False	NA	-2	True	ATTAAA	-15	NA	107486428	107475415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107484232_107484292_107486319
ENSMUST00000102533.11	chr4	+	1251	11	FSM	ENSMUSG00000001604.15	ENSMUST00000102533.11	1251	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	231.929816970565	3269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGCTGAGCCCTGGAT	6603	False	NA	15	True	AATAAA	-26	NA	135975262	136002209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992240_135995319_135995475_135998543_135998691_136000954_136001027_136002090
ENSMUST00000102534.11	chr2	-	5229	17	FSM	ENSMUSG00000027347.19	ENSMUST00000102534.11	5229	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	14.2390308658981	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCAAAGTCGTGTGCT	NA	False	NA	-7	True	CATAAA	-16	NA	117173482	117110473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_117113158_117115333_117115714_117116552_117116706_117117322_117117360_117118304_117118450_117119097_117119208_117119825_117119931_117120796_117120878_117122146_117122423_117124234_117124352_117125189_117125364_117128942_117129097_117130923_117131056_117132441_117132505_117136258_117136365_117168756_117168942_117173155
ENSMUST00000102536.11	chr4	-	833	6	FSM	ENSMUSG00000059291.16	ENSMUST00000102536.11	833	6	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	3915.89487090754	125379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGGTTTGGATTTGGTTG	NA	False	NA	-59	True	NA	NA	NA	135780704	135777041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780658
ENSMUST00000102541.10	chr4	+	1430	11	FSM	ENSMUSG00000028671.17	ENSMUST00000102541.10	1430	11	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	18.7712546197637	455	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGATTCTCACAGATGGC	4562	False	NA	11	True	AATAAA	-19	NA	135691037	135695489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_135691100_135692644_135692768_135692876_135692993_135693313_135693428_135693680_135693858_135694123_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
ENSMUST00000102542.10	chr2	-	2734	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_3	18.9670767383907	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTTTGTGTGAATGTC	NA	False	NA	-6	True	NA	NA	NA	114485445	114346900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
ENSMUST00000102545.8	chr2	-	4958	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_2	47.4803134497789	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAATGTTATTTA	6017	False	NA	-58	True	GATAAA	-18	NA	113679001	113661890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ENSMUST00000102550.10	chr4	-	2025	7	FSM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_6	159.506530691797	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTTCATCTCTGAGT	NA	False	NA	7	True	ATTAAA	-30	NA	134262579	134252860	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262392
ENSMUST00000102553.11	chr4	-	1265	6	FSM	ENSMUSG00000003038.16	ENSMUST00000102553.11	1265	6	0	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_3	652.309558415328	9615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTCTGATCTTTCCCA	NA	False	NA	NA	False	AATAAA	-25	NA	133695312	133692048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694107_133694267_133694313_133695105
ENSMUST00000102561.11	chr4	+	1813	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	0	0	0	0	multi-exon	FALSE	canonical	3	1317	junction_7	93.1791788706039	4717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCGCCCCTGGCCGTGCT	NA	False	NA	7	True	AGTAAA	-24	NA	132495645	132506063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ENSMUST00000102564.11	chr11	+	1848	15	FSM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_13	22.0579015413562	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCTATGCCAGTGTTC	NA	False	NA	8	True	AATAAA	-14	NA	70323478	70331620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ENSMUST00000102565.4	chr2	+	3720	10	FSM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_6	33.1058907144937	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTATTTATTTATTT	NA	False	NA	14	True	NA	NA	NA	103858204	103887849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
ENSMUST00000102567.4	chr4	-	1675	3	FSM	ENSMUSG00000066042.5	ENSMUST00000102567.4	1675	3	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_2	8.5	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTGATTCTGATTCT	1047	False	NA	-15	True	AATAAA	-13	NA	132191232	132186041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132187425_132190175_132190320_132191084
ENSMUST00000102569.10	chr11	-	778	5	FSM	ENSMUSG00000020831.19	ENSMUST00000102569.10	778	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	164.364495862093	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	-12	True	ATTAAA	-15	NA	70128740	70126031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70126291_70126521_70126627_70126849_70127038_70128356_70128452_70128609
ENSMUST00000102574.10	chr11	-	2168	20	FSM	ENSMUSG00000018574.15	ENSMUST00000102574.10	2168	20	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_10	16.9960073525513	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGTGAATGTCACTGCTC	NA	False	NA	4	True	AATAAA	-21	NA	69906234	69901008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905618_69905685_69905942_69906022_69906088
ENSMUST00000102576.4	chr4	+	2001	8	FSM	ENSMUSG00000040533.8	ENSMUST00000102576.4	2001	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5.36808406515884	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAATTAGTGGTGGTGA	1491	False	NA	NA	False	AATAAA	-32	NA	130671695	130682786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_130671841_130673139_130673487_130677245_130677469_130678599_130678726_130679149_130679567_130680143_130680297_130681646_130681728_130682277
ENSMUST00000102580.10	chr11	-	1640	9	FSM	ENSMUSG00000018570.18	ENSMUST00000102580.10	1640	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.57647321898295	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGCTGGGAGCTGCG	9726	False	NA	-13	True	AATAAA	-15	NA	69791783	69788188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69788319_69788444_69788581_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790637_69791128
ENSMUST00000102581.11	chr5	-	3103	7	FSM	ENSMUSG00000001098.16	ENSMUST00000102581.11	3103	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	16.3401346383682	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCCTTCTGGTCTTTTCG	NA	False	NA	2	True	AATAAA	-24	NA	114518569	114501627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507089_114508119_114508290_114512956_114513171_114518486
ENSMUST00000102586.5	chr11	-	1618	2	FSM	ENSMUSG00000018776.11	ENSMUST00000102586.5	1618	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTGGTGTGGAGAGA	9944	False	NA	NA	False	AATAAA	-17	NA	69652794	69650715	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69651981_69652441
ENSMUST00000102588.10	chr4	-	1810	9	FSM	ENSMUSG00000053730.16	ENSMUST00000102588.10	1810	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_6	5.99869777535091	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTGTGTCCTGTGATT	9992	False	NA	NA	False	AAAAAG	-21	NA	129590631	129570147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_129570602_129572364_129572486_129578104_129578293_129580563_129580901_129585760_129585916_129586225_129586310_129586858_129587079_129587678_129587806_129590507
ENSMUST00000102591.10	chr4	+	1437	5	FSM	ENSMUSG00000028797.21	ENSMUST00000102591.10	1437	5	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_2	181.287582310538	1586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3176	False	NA	16	True	AATAAA	-16	NA	129494472	129502321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129494525_129494775_129494928_129495987_129496055_129500879_129500973_129501248
ENSMUST00000102593.11	chr4	-	1123	11	FSM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	0	0	0	0	multi-exon	FALSE	canonical	3	822	junction_10	179.667915889287	13576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGCAGCCTGTCTGT	6377	False	NA	0	True	AATAAA	-32	NA	129494441	129485752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494386
ENSMUST00000102597.5	chr4	-	2038	14	FSM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	0	0	0	0	multi-exon	FALSE	canonical	3	1463	junction_10	202.513203601978	6301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGTTGGTTTAAGTT	8808	False	NA	-5	True	AATAAA	-22	NA	129436506	129409896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ENSMUST00000102601.10	chr11	+	759	4	FSM	ENSMUSG00000049299.15	ENSMUST00000102601.10	759	4	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_2	10.7082522694727	1519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	False	NA	16	True	AATAAA	-25	NA	69214888	69216619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69215083_69215220_69215292_69215649_69215789_69216264
ENSMUST00000102602.8	chr11	+	751	5	FSM	ENSMUSG00000049299.15	ENSMUST00000102602.8	751	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	97.8682149627753	1686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	False	NA	16	True	AATAAA	-25	NA	69214805	69216619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69214893_69214983_69215083_69215220_69215292_69215649_69215789_69216264
ENSMUST00000102604.11	chr4	+	1781	7	FSM	ENSMUSG00000028792.15	ENSMUST00000102604.11	1781	7	0	0	0	0	multi-exon	FALSE	canonical	3	1917	junction_3	122.234746833023	3901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	2869	False	NA	29	True	AATAAA	-19	NA	128887016	128905322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
ENSMUST00000102606.10	chr11	+	1828	5	FSM	ENSMUSG00000018740.15	ENSMUST00000102606.10	1828	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	4.96865172858795	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGTGTCTTATGTTTA	5558	False	NA	6	True	CATAAA	-18	NA	68858956	68863342	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_68859864_68861549_68861616_68862009_68862163_68862494_68862630_68862775
ENSMUST00000102616.8	chr4	-	1542	11	FSM	ENSMUSG00000028845.16	ENSMUST00000102616.8	1542	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	4.52658811910251	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCTTTTCTGCTAC	3091	False	NA	NA	False	AATAAA	-15	NA	126219481	126215913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_126216213_126216364_126216445_126216612_126216757_126216912_126217021_126217149_126217265_126217431_126217576_126218022_126218229_126218386_126218513_126218595_126218802_126218926_126218997_126219437
ENSMUST00000102625.11	chr3	-	1866	12	FSM	ENSMUSG00000068739.14	ENSMUST00000102625.11	1866	12	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	974.241336537401	10255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGCTTCCCCAGTCTCC	NA	False	NA	-39	True	AATAAA	-18	NA	108352485	108333927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_108334298_108334575_108334706_108335176_108335249_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ENSMUST00000102629.8	chr3	+	1687	8	FSM	ENSMUSG00000068744.13	ENSMUST00000102629.8	1687	8	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	112.452983372553	1946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGCTCTCAGACATAGG	7052	False	NA	68	True	AATAAA	-16	NA	108291174	108295547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_108291212_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ENSMUST00000102637.8	chr3	-	3586	19	FSM	ENSMUSG00000027889.18	ENSMUST00000102637.8	3586	19	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_18	33.5369705707258	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993967	107981379	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
ENSMUST00000102638.8	chr3	-	3650	18	FSM	ENSMUSG00000027889.18	ENSMUST00000102638.8	3650	18	0	0	0	0	multi-exon	TRUE	canonical	3	198	junction_12	21.7907634157735	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	107993943	107981377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
ENSMUST00000102642.9	chr2	+	1560	4	FSM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_3	17.1075032271418	28030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCAGAAGTCGGACTTCA	NA	False	NA	NA	False	GATAAA	-13	NA	84629171	84640520	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348
ENSMUST00000102645.4	chr2	+	2059	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGCTGGAGTCTTCCCT	3357	False	NA	12	True	AATAAA	-21	NA	84508745	84518559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
ENSMUST00000102646.4	chr2	-	783	3	FSM	ENSMUSG00000076437.12	ENSMUST00000102646.4	783	3	0	0	0	0	multi-exon	FALSE	canonical	3	2216	junction_1	111	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTTGTAGTTAAGGTT	369	False	NA	NA	False	AATAAA	-15	NA	84501041	84500038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_84500461_84500588_84500735_84500826
ENSMUST00000102647.11	chr2	-	654	4	FSM	ENSMUSG00000076437.12	ENSMUST00000102647.11	654	4	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	946.216677088287	13785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAGCAAGTTTAAATTT	358	False	NA	-14	True	AATAAA	-19	NA	84501052	84499564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_84499742_84500355_84500461_84500588_84500735_84500826
ENSMUST00000102649.4	chr4	+	2074	11	FSM	ENSMUSG00000028653.17	ENSMUST00000102649.4	2074	11	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	10.336343647538	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGCTGCATTGTCAAT	NA	False	NA	26	True	AATAAA	-30	NA	122910389	122948742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
ENSMUST00000102657.10	chr11	+	817	7	FSM	ENSMUSG00000001039.13	ENSMUST00000102657.10	817	7	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_4	19.5739339144917	1817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCCTTCATTTCTTG	NA	False	NA	23	True	AATAAA	-23	NA	61395969	61403757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61403477
ENSMUST00000102672.5	chr2	-	2475	5	FSM	ENSMUSG00000015839.7	ENSMUST00000102672.5	2475	5	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_1	38.2058568808501	1918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACTTTTTGAATTTA	NA	False	NA	1	True	AATAAA	-22	NA	75534985	75505856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534707
ENSMUST00000102673.11	chr4	+	1248	7	FSM	ENSMUSG00000006390.16	ENSMUST00000102673.11	1248	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.4376862673853	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGATTGTGTGTGTGTG	NA	False	NA	1	True	ATTAAA	-14	NA	118285321	118289810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_118285413_118287692_118287753_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ENSMUST00000102687.4	chr4	-	1566	11	FSM	ENSMUSG00000009640.12	ENSMUST00000102687.4	1566	11	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	49.3527101586124	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	False	NA	-35	True	AATAGA	-20	NA	117539470	117531877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539180_117539410
ENSMUST00000102689.10	chr2	-	4181	7	FSM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	141.426561233109	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTGAAAAAGTCTAATTT	2885	False	NA	-12	True	ATTAAA	-25	NA	72810790	72766770	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810593
ENSMUST00000102691.11	chr2	+	2424	9	FSM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	0	0	0	0	multi-exon	FALSE	canonical	3	1115	junction_3	87.0351042683353	3717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	8569	False	NA	NA	False	AATAAA	-16	NA	72306502	72317237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ENSMUST00000102693.9	chr11	-	961	7	FSM	ENSMUSG00000000301.17	ENSMUST00000102693.9	961	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	8.67307455417179	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGGTCTCCTTCCCA	NA	False	NA	1	True	AATAAA	-19	NA	59937307	59861439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_59861702_59862009_59862085_59864893_59865006_59867664_59867811_59874268_59874385_59922538_59922647_59937165
ENSMUST00000102695.4	chr11	+	1306	5	FSM	ENSMUSG00000032615.15	ENSMUST00000102695.4	1306	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	9.12414379544733	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCTGTGGCCTTCTC	1719	False	NA	6	True	AATAAA	-16	NA	59738898	59767359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_59739199_59743616_59743718_59751575_59751637_59765378_59765494_59766630
ENSMUST00000102696.5	chr4	-	860	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	0	0	0	0	multi-exon	FALSE	canonical	3	8358	junction_5	1894.95893359197	178888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTTGGAGAGGCTGG	NA	False	NA	-13	True	AATAAA	-30	NA	117013440	117011023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
ENSMUST00000102699.8	chr4	+	1654	16	FSM	ENSMUSG00000028687.18	ENSMUST00000102699.8	1654	16	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	29.5893374188894	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTTGGAGAACTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	116664919	116676628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ENSMUST00000102704.4	chr4	-	3025	18	FSM	ENSMUSG00000028702.16	ENSMUST00000102704.4	3025	18	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_11	50.1315225199974	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAGGCATGAAAGGGA	NA	False	NA	-55	True	AAGAAA	-38	NA	115980856	115954171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ENSMUST00000102705.10	chr4	-	2780	19	FSM	ENSMUSG00000028702.16	ENSMUST00000102705.10	2780	19	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_18	87.8901706606913	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGGTGTTAGGCATTC	NA	False	NA	4	True	NA	NA	NA	115980882	115954112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ENSMUST00000102727.3	chr11	-	2471	25	FSM	ENSMUSG00000018340.14	ENSMUST00000102727.3	2471	25	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_5	83.6892399827414	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	False	NA	-4	True	NA	NA	NA	54924271	54869933	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ENSMUST00000102730.9	chr11	-	2787	19	FSM	ENSMUSG00000020400.18	ENSMUST00000102730.9	2787	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	88.3855191759374	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	6847	False	NA	-5	True	CATAAA	-18	NA	54853736	54801612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54843175_54843229_54853658
ENSMUST00000102736.9	chr4	+	4179	29	FSM	ENSMUSG00000053510.13	ENSMUST00000102736.9	4179	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	139.898300342697	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTAACACTTGATTTTC	9940	False	NA	NA	False	AATAAA	-23	NA	108857851	108918974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ENSMUST00000102744.4	chr4	+	3014	17	FSM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_7	60.5103296966724	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5272	False	NA	21	True	NA	NA	NA	108436650	108472030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ENSMUST00000102746.11	chr7	-	2579	17	FSM	ENSMUSG00000052997.16	ENSMUST00000102746.11	2579	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	386.788858543974	3367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGCCCTAGTGGGTTT	NA	False	NA	0	True	AATAAA	-27	NA	33868000	33840112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ENSMUST00000102758.8	chr11	+	2022	9	FSM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	0	0	0	0	multi-exon	FALSE	canonical	3	3003	junction_1	192.557742962988	22268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTGTTTTTGTTA	5131	False	NA	30	True	AATAAA	-26	NA	52251686	52280224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
ENSMUST00000102763.5	chr11	+	1832	3	FSM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	0	0	0	0	multi-exon	FALSE	canonical	3	1066	junction_1	20	1606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAGGTTCAAGTTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	51858487	51868161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_51858785_51860970_51861071_51866726
ENSMUST00000102767.8	chr2	-	2057	5	FSM	ENSMUSG00000036249.17	ENSMUST00000102767.8	2057	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	2.77263412660235	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGCTGCATCATTATT	NA	False	NA	NA	False	ATTAAA	-1	NA	51825019	51814459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_51815947_51816692_51816773_51819671_51819862_51822411_51822536_51824843
ENSMUST00000102768.8	chr2	-	2106	5	FSM	ENSMUSG00000036249.17	ENSMUST00000102768.8	2106	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	13.0455931256497	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGCTGCATCATTATT	NA	False	NA	NA	False	ATTAAA	-1	NA	51825175	51814459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_51815947_51816692_51816773_51819671_51819862_51822411_51822532_51824946
ENSMUST00000102769.11	chr2	-	1342	8	FSM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_7	76.2190720146573	1988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50186729	50169892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
ENSMUST00000102774.11	chr11	-	2037	8	FSM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	263.494104027287	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTGATCCGTACGAGT	NA	False	NA	-14	True	AATAAA	-22	NA	50101654	50090978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_50091775_50093225_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ENSMUST00000102782.4	chr1	+	445	1	FSM	ENSMUSG00000078193.3	ENSMUST00000102782.4	445	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92866	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	156193609	156194054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_156193600_156194100
ENSMUST00000102786.11	chr4	-	716	8	FSM	ENSMUSG00000028549.18	ENSMUST00000102786.11	716	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	75.5961342279093	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTATGGAGCTCAGAG	NA	False	NA	58	True	NA	NA	NA	99717329	99655567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99690333_99690470_99702294_99702338_99717319
ENSMUST00000102793.11	chr4	-	1027	7	FSM	ENSMUSG00000028563.17	ENSMUST00000102793.11	1027	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	212.976328888134	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTGACCTGTTATTAA	NA	False	NA	-4	True	AATAAA	-18	NA	98271543	98243606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_98243918_98246154_98246285_98253799_98253874_98258728_98258821_98263156_98263266_98268854_98268929_98271306
ENSMUST00000102811.10	chr2	+	729	7	FSM	ENSMUSG00000038900.18	ENSMUST00000102811.10	729	7	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	2477.85254246943	12449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGGCTTGGCTGCTTTTT	5822	False	NA	22	True	AATAAA	-21	NA	32851751	32854055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_32851973_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ENSMUST00000102814.5	chr4	-	878	5	FSM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	14010	junction_1	3685.72343645043	171159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTTCATTAATAGTGT	NA	False	NA	NA	False	AATAAA	-21	NA	86775649	86772896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775097_86775557
ENSMUST00000102818.11	chr2	+	3626	6	FSM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	7.22218803410712	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCAACCACTTCCTCCA	NA	False	NA	16	True	AATAAA	-18	NA	32477106	32489710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
ENSMUST00000102840.5	chr2	-	1696	16	Antisense	novelGene_ENSMUSG00000076441.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGGCCCGGCCCCCGCTCC	NA	False	NA	NA	False	NA	NA	NA	31410684	31360218	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr2_-_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ENSMUST00000102844.4	chr11	+	637	5	Antisense	novelGene_ENSMUSG00000020460.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	206871	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGATCCGAGCGTGGCCG	NA	False	NA	NA	False	NA	NA	NA	29495845	29497860	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr11_+_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680
ENSMUST00000102845.11	chr11	-	791	6	FSM	ENSMUSG00000020460.16	ENSMUST00000102845.11	791	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5362.30439270282	207829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29498109	29495845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497746_29497840
ENSMUST00000102852.6	chr2	-	3647	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	10.5	771	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGTGGTCATGATGTC	8411	False	NA	NA	False	NA	NA	NA	30793309	30779482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30782839_30790878_30790962_30793101
ENSMUST00000102856.9	chr11	+	2410	12	FSM	ENSMUSG00000020463.16	ENSMUST00000102856.9	2410	12	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_3	30.8097333552481	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTTTATTCTTACTT	NA	False	NA	NA	False	AATAAA	-19	NA	29122889	29159641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316
ENSMUST00000102865.11	chr2	-	1165	5	FSM	ENSMUSG00000015335.17	ENSMUST00000102865.11	1165	5	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_1	34.0917878674616	2799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTGGACTCTTTCC	NA	False	NA	-3	True	ATTAAA	-16	NA	29983660	29980955	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983500
ENSMUST00000102866.10	chr2	+	2824	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	0	0	0	0	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	33456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	NA	False	NA	19	True	AATAAA	-24	NA	29951864	29962589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ENSMUST00000102898.5	chr2	+	914	8	FSM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	0	0	0	0	multi-exon	FALSE	canonical	3	2861	junction_1	795.089880684786	91896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGGTTATTTGGGT	NA	False	NA	6	True	AATATA	-19	NA	26800775	26803330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
ENSMUST00000102899.10	chr2	-	3506	3	FSM	ENSMUSG00000015776.13	ENSMUST00000102899.10	3506	3	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	2.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTGTCTTTCTTGAT	NA	False	NA	-4	True	AATAAA	-18	NA	26800689	26795273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_26798314_26799004_26799086_26800304
ENSMUST00000102915.10	chr4	+	5404	25	FSM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	46.9361083164006	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	-19	True	NA	21	True	ATTAAA	-21	NA	52439242	52488260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ENSMUST00000102921.4	chr11	-	590	7	FSM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	30.6671195618731	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTGTTGGCTTGACTG	NA	False	NA	2	True	AATAAA	-20	NA	5848782	5846636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_5846782_5847125_5847175_5847319_5847399_5847831_5847937_5848159_5848236_5848425_5848540_5848760
ENSMUST00000102922.10	chr11	-	1646	11	FSM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	0	0	0	0	multi-exon	FALSE	canonical	3	869	junction_10	541.870242770352	2821	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTCACTTGGGCATGT	9505	False	NA	2	True	AATAAA	-25	NA	5828292	5822179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
ENSMUST00000102928.5	chr11	+	2295	13	FSM	ENSMUSG00000020476.15	ENSMUST00000102928.5	2295	13	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	84.6740072277201	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATATAACTGATGTCAG	NA	False	NA	-2	True	NA	NA	NA	5738529	5750962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747283_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ENSMUST00000102930.10	chr11	-	2174	18	FSM	ENSMUSG00000009079.17	ENSMUST00000102930.10	2174	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1623.90424701095	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGAGTTTTTTTTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	5049042	5019896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041459_5041478_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ENSMUST00000102944.11	chr4	+	1884	9	FSM	ENSMUSG00000028466.16	ENSMUST00000102944.11	1884	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	10.0615294563004	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTTTTTACTGGCACA	6408	False	NA	5	True	AATAAA	-14	NA	43562331	43567060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
ENSMUST00000102955.11	chr3	-	1064	5	FSM	ENSMUSG00000045031.19	ENSMUST00000102955.11	1064	5	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_2	3.41869858279434	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTATCTTCTGGTAGT	NA	False	NA	NA	False	AATAAA	-21	NA	37366595	37362770	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_37363331_37363493_37363632_37364085_37364215_37364441_37364589_37366505
ENSMUST00000102965.4	chr13	+	397	1	FSM	ENSMUSG00000069266.6	ENSMUST00000102965.4	397	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1017	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTCCCTCACCCTTC	6287	False	NA	NA	False	AAAAAG	-7	NA	23940995	23941392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_23941000_23941400
ENSMUST00000102980.11	chr6	-	1387	10	FSM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_4	199.673498924718	6725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGTGGTCCGTTTTG	NA	False	NA	-5	True	AATAAA	-16	NA	34294413	34280868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
ENSMUST00000102981.10	chr2	-	2448	12	FSM	ENSMUSG00000025816.16	ENSMUST00000102981.10	2448	12	0	0	0	0	multi-exon	TRUE	canonical	3	221	junction_3	37.3630833845388	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGTTCTCTAAGAGT	NA	False	NA	-17	True	AATAAA	-10	NA	5900243	5875797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ENSMUST00000102985.8	chr2	-	4867	20	FSM	ENSMUSG00000026669.15	ENSMUST00000102985.8	4867	20	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_19	167.610417568725	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATGTTTATCTTTTTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	5017155	4994524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5016705
ENSMUST00000102997.8	chr4	+	3365	12	FSM	ENSMUSG00000028252.21	ENSMUST00000102997.8	3365	12	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_11	80.4513096421711	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTTCTTTTTAATTT	20	False	NA	NA	False	NA	NA	NA	21727725	21750546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
ENSMUST00000103002.8	chr12	-	2110	5	FSM	ENSMUSG00000076432.14	ENSMUST00000103002.8	2110	5	0	0	0	0	multi-exon	FALSE	canonical	3	3292	junction_3	152.582764426393	5142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATGGCTTTGTAACA	NA	False	NA	NA	False	AATAAA	-20	NA	21467437	21440329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798
ENSMUST00000103008.12	chr4	+	2086	9	FSM	ENSMUSG00000028249.16	ENSMUST00000103008.12	2086	9	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_4	110.946425697271	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGTCTGTCTGTGCCTG	-5	True	NA	13	True	ATTAAA	-18	NA	6365676	6395655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385028_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ENSMUST00000103009.5	chr4	-	582	3	FSM	ENSMUSG00000028234.7	ENSMUST00000103009.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	6653	junction_2	831.5	16896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGCTGGCTTTTGTT	110	False	NA	-40	True	AATAAA	-15	NA	3835488	3834472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_3834684_3834935_3835010_3835191
ENSMUST00000103013.10	chr11	+	3906	39	FSM	ENSMUSG00000039230.15	ENSMUST00000103013.10	3906	39	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_21	67.5521189983218	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	False	NA	33	True	ATTAAA	-15	NA	121342774	121507990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469602_121470973_121470997_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ENSMUST00000103016.8	chr11	+	1689	15	FSM	ENSMUSG00000025142.19	ENSMUST00000103016.8	1689	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	257.64954048918	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563889	120600270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120563997_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUST00000103026.10	chr11	+	2589	17	FSM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_16	87.2585955651362	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCTTCAAATCTTTTGA	NA	False	NA	3	True	ATTAAA	-17	NA	117006063	117048385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117048084
ENSMUST00000103032.11	chr11	+	3551	26	FSM	ENSMUSG00000020782.19	ENSMUST00000103032.11	3551	26	0	0	0	0	multi-exon	TRUE	canonical	3	630	junction_7	88.2626444199357	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6800	False	NA	40	True	AATAAA	-25	NA	115714874	115746606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ENSMUST00000103036.5	chr11	+	749	6	FSM	ENSMUSG00000018858.16	ENSMUST00000103036.5	749	6	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	353.082766501	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	16	True	AATAAA	-16	NA	115294582	115301745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_115294700_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ENSMUST00000103038.8	chr11	-	1143	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103038.8	1143	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	51.0217818409179	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	-5	True	AGTAAA	-16	NA	115078158	115073657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077661_115077944
ENSMUST00000103040.11	chr11	-	1204	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103040.11	1204	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	40.7553677446297	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	-5	True	AGTAAA	-16	NA	115078216	115073657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077664_115077944
ENSMUST00000103053.10	chr2	-	950	7	FSM	ENSMUSG00000027574.16	ENSMUST00000103053.10	950	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_2	10.8576649832682	378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATTCGCATCCCTGGT	NA	False	NA	NA	False	NA	NA	NA	180596492	180576564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_180576823_180577735_180577821_180578943_180579005_180584822_180585021_180585533_180585615_180585869_180586008_180596363
ENSMUST00000103055.8	chr2	-	4613	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTATCCTTCTGTGT	NA	False	NA	-7	True	TTTAAA	-31	NA	180351792	180322850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ENSMUST00000103060.10	chr11	-	2050	13	FSM	ENSMUSG00000041895.16	ENSMUST00000103060.10	2050	13	0	0	0	0	multi-exon	FALSE	canonical	1	33	junction_5	23.2491039253846	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGTTGTTTACATTT	NA	False	NA	-6	True	AATAAA	-15	NA	109502258	109464156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ENSMUST00000103061.3	chr11	+	1832	8	FSM	ENSMUSG00000020610.18	ENSMUST00000103061.3	1832	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	12.4638252063927	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTGGCCCTAGGAAT	NA	False	NA	19	True	AATAAA	-15	NA	109317051	109327815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ENSMUST00000103068.10	chr11	+	2597	19	FSM	ENSMUSG00000018372.14	ENSMUST00000103068.10	2597	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	19.4787792098523	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTTTTGAATTTATAAC	5096	False	NA	17	True	AATAAA	-19	NA	106680077	106709686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ENSMUST00000103069.10	chr11	-	3233	14	FSM	ENSMUSG00000020717.20	ENSMUST00000103069.10	3233	14	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_1	285.979785771342	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	9553	False	NA	-9	True	AATAAA	-19	NA	106606091	106545042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844
ENSMUST00000103075.11	chr11	-	3766	21	FSM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_14	21.9246436687122	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTATAGACCAGTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	103844882	103712607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ENSMUST00000103098.9	chr11	+	4654	24	FSM	ENSMUSG00000017119.21	ENSMUST00000103098.9	4654	24	0	0	0	0	multi-exon	TRUE	canonical	3	112	junction_17	38.3552196362625	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	774	False	NA	21	True	AATAAA	-24	NA	101443479	101472777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ENSMUST00000103101.11	chr2	+	2562	12	FSM	ENSMUSG00000017721.16	ENSMUST00000103101.11	2562	12	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_9	44.392501786631	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGTTGCTTCCTTCCTAA	5112	False	NA	7	True	AATAAA	-16	NA	164339439	164350221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194
ENSMUST00000103107.5	chr11	+	2335	7	FSM	ENSMUSG00000078653.5	ENSMUST00000103107.5	2335	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_6	3.09120616516523	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGGTATTGTAAACATG	NA	False	NA	9	True	AATAAA	-14	NA	101169921	101179527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101170307_101174217_101174294_101174546_101174719_101175585_101175749_101176490_101176636_101177679_101177777_101178230
ENSMUST00000103118.4	chr11	-	3046	18	FSM	ENSMUSG00000020918.15	ENSMUST00000103118.4	3046	18	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_10	104.829867108865	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	6779	False	NA	-1	True	AATAAA	-18	NA	100603291	100595571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ENSMUST00000103120.5	chr11	+	2357	4	FSM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	8.2192186706253	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCTATCACTCTTG	NA	False	NA	19	True	AATAAA	-15	NA	100465729	100472554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100465895_100467061_100467732_100469738_100469879_100471172
ENSMUST00000103122.10	chr2	-	3596	13	FSM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_8	19.1534374634598	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTCTGCCTTGTCCTTT	8806	False	NA	NA	False	AATAAA	-22	NA	157988356	157958321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
ENSMUST00000103124.11	chr11	-	2120	11	FSM	ENSMUSG00000006930.16	ENSMUST00000103124.11	2120	11	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_1	44.9070150421958	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCAACCCCGCAGCAGC	2048	False	NA	NA	False	NA	NA	NA	100246913	100239684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ENSMUST00000103129.9	chr2	-	2080	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_10	28.450131809888	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTATGTGACAGTGTGT	8134	False	NA	-6	True	AATAAA	-30	NA	156848995	156837184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
ENSMUST00000103130.8	chr2	-	2636	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103130.8	2636	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	60.8885046622103	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTGAAGTGTACACTAT	8055	False	NA	-18	True	AATAAA	-18	NA	156849074	156837196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156848283_156848894
ENSMUST00000103146.5	chr11	-	1059	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	0	0	0	0	multi-exon	FALSE	canonical	3	11120	junction_4	1307.0006455622	197776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGTGAGTGCTTGAGA	NA	False	NA	-9	True	AATAAA	-17	NA	97673263	97668352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
ENSMUST00000103147.5	chr11	+	766	6	FSM	ENSMUSG00000069744.8	ENSMUST00000103147.5	766	6	0	0	0	0	multi-exon	FALSE	canonical	3	3867	junction_2	170.920566345891	21801	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGCCTGCCTTT	NA	False	NA	22	True	AATAAA	-15	NA	97594224	97604326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604218
ENSMUST00000103148.8	chr11	-	1438	11	FSM	ENSMUSG00000018537.17	ENSMUST00000103148.8	1438	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	75.0416550990182	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATATACATACTTATTT	NA	False	NA	8	True	NA	NA	NA	97590467	97580645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590031_97590127_97590361
ENSMUST00000103152.11	chr11	-	2250	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	1866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCACCTTTACTGGCT	NA	False	NA	-13	True	GATAAA	-16	NA	96807322	96798251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ENSMUST00000103160.5	chr2	+	1369	8	FSM	ENSMUSG00000027455.17	ENSMUST00000103160.5	1369	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	482.170602376294	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGTGTACACATAATC	NA	False	NA	128	True	NA	NA	NA	151336223	151353334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151336333_151338503_151338602_151342634_151342710_151344933_151345100_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ENSMUST00000103164.4	chr11	-	3154	16	FSM	ENSMUSG00000076435.4	ENSMUST00000103164.4	3154	16	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	8.37615663654877	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGATTGGACTGTAACTC	7285	False	NA	-4	True	AATAAA	-19	NA	94492697	94447927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_94449184_94449465_94449535_94449690_94449802_94450288_94450431_94452065_94452218_94453636_94453745_94460135_94460213_94460766_94460859_94461128_94461287_94461439_94461536_94462096_94462263_94462387_94462507_94463051_94463106_94463347_94463477_94463858_94464055_94492468
ENSMUST00000103172.4	chr2	+	1911	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	0	0	0	0	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	9673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCTTTGTGTGGTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	143757239	143785244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
ENSMUST00000103180.4	chr4	+	1688	6	FSM	ENSMUSG00000029047.14	ENSMUST00000103180.4	1688	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	7.62627038597505	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGCCGGGCGTGGTGGC	NA	False	NA	NA	False	TTTAAA	-9	NA	155151472	155156890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155151632_155152279_155152361_155153119_155153527_155154843_155155020_155155097_155155234_155156161
ENSMUST00000103186.11	chr11	-	6519	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	0	0	0	0	multi-exon	TRUE	canonical	3	813	junction_25	122.673691341487	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGGTATTTCTTTTCAA	NA	False	NA	0	True	AATAAA	-18	NA	86648391	86585176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ENSMUST00000103188.10	chr2	-	1241	6	FSM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	33.1336686770421	3421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTCAGAGGTTAGCGGG	NA	False	NA	-15	True	AATAAA	-14	NA	131001940	130988244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513_130995631_131001872
ENSMUST00000103191.11	chr4	+	474	4	FSM	ENSMUSG00000028936.16	ENSMUST00000103191.11	474	4	0	0	0	0	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	111035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410309	152416937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
ENSMUST00000103195.5	chr11	-	998	5	FSM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_2	22.0609949911603	1610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTTCCCTTAGTAAAC	NA	False	NA	69	True	AATAAA	-16	NA	84807192	84801775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_84802475_84804047_84804129_84805036_84805112_84806924_84806957_84807081
ENSMUST00000103198.11	chr2	+	1877	12	FSM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	0	0	0	0	multi-exon	FALSE	canonical	3	1876	junction_9	231.115011975273	6351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116349	130121233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ENSMUST00000103199.9	chr2	-	1161	7	FSM	ENSMUSG00000027404.17	ENSMUST00000103199.9	1161	7	0	0	0	0	multi-exon	FALSE	canonical	3	3295	junction_4	264.518850409989	14774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCATTTGTCTTCTGA	NA	False	NA	-11	True	AATAAA	-28	NA	130021323	130013554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934_130019087_130021153
ENSMUST00000103205.11	chr2	+	3998	15	FSM	ENSMUSG00000027395.16	ENSMUST00000103205.11	3998	15	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_10	36.5564282853179	577	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128942914	128968514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ENSMUST00000103213.10	chr11	-	1783	13	FSM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	0	0	0	0	multi-exon	TRUE	canonical	3	193	junction_4	34.6180548590215	631	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAGCTTCTTGTTCTA	8303	False	NA	-6	True	AATAAA	-22	NA	82799237	82791593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ENSMUST00000103217.11	chr4	-	2006	9	FSM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_6	18.1757909043871	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGCTCTGACCTCGTC	NA	False	NA	-12	True	AATAAA	-20	NA	149184333	149044991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149160476_149160525_149184228
ENSMUST00000103220.4	chr2	+	6745	45	FSM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_16	102.022451345341	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCCTTAACAGTGATAC	NA	False	NA	15	True	AATAAA	-17	NA	127050318	127082371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ENSMUST00000103233.10	chr11	-	2230	7	FSM	ENSMUSG00000017561.17	ENSMUST00000103233.10	2230	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	206.037820152838	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTTGTGGTTTTTTGT	4541	False	NA	-3	True	AATAAA	-20	NA	79971764	79937318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_79938564_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
ENSMUST00000103242.5	chr11	-	1375	3	FSM	ENSMUSG00000037278.10	ENSMUST00000103242.5	1375	3	0	0	0	0	multi-exon	FALSE	canonical	3	1037	junction_2	9	3942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTGTTGTGTGGAT	NA	False	NA	-7	True	AATAAA	-23	NA	78441603	78432642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_78433623_78434311_78434457_78441353
ENSMUST00000103979.3	chr10	-	246	1	FSM	ENSMUSG00000077167.3	ENSMUST00000103979.3	246	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTGGATGGTGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	90954398	90954152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_90954200_90954400
ENSMUST00000104203.3	chr19	-	146	1	FSM	ENSMUSG00000077391.3	ENSMUST00000104203.3	146	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1446	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCTCTCATAAGTTTAA	4906	False	NA	-109	True	NA	NA	NA	44102563	44102417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44102400_44102600
ENSMUST00000104206.3	chr9	-	76	1	FSM	ENSMUSG00000077394.3	ENSMUST00000104206.3	76	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAACTACAAAGCGGTT	NA	False	NA	NA	False	NA	NA	NA	15237835	15237759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_15237800_15237800
ENSMUST00000104317.3	chr12	+	122	1	FSM	ENSMUSG00000077505.3	ENSMUST00000104317.3	122	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAGAAGGATAAAGA	NA	False	NA	NA	False	NA	NA	NA	59180857	59180979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_59180900_59181000
ENSMUST00000104318.3	chr9	-	70	1	FSM	ENSMUSG00000077506.3	ENSMUST00000104318.3	70	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGACAACTGGCAAATG	NA	False	NA	-14	True	NA	NA	NA	15237629	15237559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_15237600_15237600
ENSMUST00000104387.3	chr7	+	130	1	FSM	ENSMUSG00000077575.3	ENSMUST00000104387.3	130	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	474	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATCTGGGCTGGCATATG	NA	False	NA	NA	False	NA	NA	NA	109120486	109120616	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_109120500_109120600
ENSMUST00000104546.3	chr15	-	94	1	FSM	ENSMUSG00000077734.3	ENSMUST00000104546.3	94	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGATCTTAGTTGCCT	8333	False	NA	NA	False	NA	NA	NA	79962792	79962698	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79962700_79962800
ENSMUST00000104549.3	chr15	+	81	1	FSM	ENSMUSG00000077737.3	ENSMUST00000104549.3	81	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTACGGTCTGCTTGATCA	4007	False	NA	NA	False	NA	NA	NA	5147885	5147966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_5147900_5148000
ENSMUST00000104916.4	chr19	+	571	1	FSM	ENSMUSG00000044424.5	ENSMUST00000104916.4	571	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	643	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAATGACTGAATAAAG	NA	False	NA	NA	False	NA	NA	NA	23597112	23597683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_23597100_23597700
ENSMUST00000104958.2	chr11	-	837	1	FSM	ENSMUSG00000078153.4	ENSMUST00000104958.2	837	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1954	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAGAAATAC	1535	False	NA	NA	False	AATAAA	-22	NA	48837017	48836180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_48836200_48837000
ENSMUST00000105229.9	chr10	+	1043	8	FSM	ENSMUSG00000025351.15	ENSMUST00000105229.9	1043	8	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	1345.38160886396	9611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	NA	False	NA	35	True	ATTAAA	-27	NA	128744688	128748691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128744922_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ENSMUST00000105230.4	chr10	+	918	11	FSM	ENSMUSG00000078427.4	ENSMUST00000105230.4	918	11	0	0	0	0	multi-exon	FALSE	canonical	3	1529	junction_8	1099.33345259753	13286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAGAAAATGTGTTTT	NA	False	NA	NA	False	AATAAA	-6	NA	128657762	128713486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ENSMUST00000105267.8	chr10	-	2800	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417405	116321070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ENSMUST00000105355.8	chr10	+	2127	5	FSM	ENSMUSG00000035504.17	ENSMUST00000105357.2	2127	5	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_4	47.9921868641136	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGTGTCCGCTAAGCTG	7027	False	NA	18	True	AATAAA	-19	NA	80165786	80172275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170943
ENSMUST00000105363.8	chr10	-	988	6	FSM	ENSMUSG00000020150.14	ENSMUST00000105363.8	988	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	3.91918358845308	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGTTGGCAGTGAG	9249	False	NA	NA	False	AATAAA	-18	NA	80096846	80093984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80094292_80094773_80094885_80095010_80095079_80095434_80095499_80095601_80095748_80096554
ENSMUST00000105364.8	chr10	+	983	9	FSM	ENSMUSG00000020153.15	ENSMUST00000105364.8	983	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	752.129476885463	8343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9361	False	NA	24	True	AATAAA	-15	NA	80084954	80092627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80085039_80085145_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUST00000105365.9	chr10	+	1321	7	FSM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_6	33.736314097555	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGACCATTTCCC	6129	False	NA	NA	False	ATTAAA	-18	NA	80003611	80007489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80006815
ENSMUST00000105366.2	chr10	+	781	3	FSM	ENSMUSG00000003072.16	ENSMUST00000105366.2	781	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	1205	2883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTGTTCTGTTTCTAA	4500	False	NA	14	True	ATTAAA	-13	NA	79978203	79981646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79978441_79979665_79979820_79981256
ENSMUST00000105372.9	chr10	+	959	7	FSM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	0	0	0	0	multi-exon	FALSE	canonical	3	7423	junction_5	743.006878987148	34638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	655	False	NA	4	True	AATAAA	-14	NA	79889321	79892273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ENSMUST00000105381.5	chr10	+	1240	6	FSM	ENSMUSG00000023175.16	ENSMUST00000105381.5	1240	6	0	0	0	0	multi-exon	FALSE	canonical	3	6175	junction_4	464.180568313668	5708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	21	True	AATAAA	-15	NA	79545431	79547803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ENSMUST00000105384.5	chr10	+	2329	16	FSM	ENSMUSG00000032763.12	ENSMUST00000105384.5	2329	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	41.9345521815444	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATACTGGTTTATT	5399	False	NA	30	True	AATAAA	-39	NA	78410333	78420336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_78410500_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ENSMUST00000105397.10	chr10	+	1818	7	FSM	ENSMUSG00000020284.17	ENSMUST00000105397.10	1818	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	1.5723301886761	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGTGTCCCAGGCCC	NA	False	NA	12	True	AATAAA	-12	NA	77814357	77821268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_77814616_77815586_77815606_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
ENSMUST00000105410.10	chr10	+	2347	6	FSM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	40.1875602643405	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTGTTGTGAGACAC	NA	False	NA	16	True	ATTAAA	-18	NA	76869045	76886265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_76869182_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
ENSMUST00000105447.11	chr10	-	2597	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	0	0	0	0	multi-exon	FALSE	canonical	3	953	junction_7	50.5010829091813	2236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTAAGTTTGTAGTT	5198	False	NA	-11	True	AATAAA	-12	NA	62322584	62291055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ENSMUST00000105455.9	chr10	+	1512	10	FSM	ENSMUSG00000020085.16	ENSMUST00000105455.9	1512	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	38.6497408676411	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	False	NA	8	True	AATAAA	-19	NA	61551041	61574432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574177
ENSMUST00000105466.3	chr10	+	2918	15	FSM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_7	20.6288880070682	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGGGCTCCGGCTCATT	NA	False	NA	NA	False	NA	NA	NA	59159189	59208073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUST00000105499.2	chr10	+	1057	3	FSM	ENSMUSG00000019804.13	ENSMUST00000105499.2	1057	3	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	903	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGCACGGCCTCCAG	NA	False	NA	23	True	AATAAA	-24	NA	42378285	42411377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_42378489_42409144_42409270_42410648
ENSMUST00000105505.10	chr10	-	2071	9	FSM	ENSMUSG00000019813.17	ENSMUST00000105505.10	2071	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	56.5215666803389	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGGAAATATTCTGGGA	NA	False	NA	5	True	AATAAA	-26	NA	41621927	41594835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766
ENSMUST00000105512.8	chr10	-	2727	12	FSM	ENSMUSG00000039480.15	ENSMUST00000105512.8	2727	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	20.4676725553911	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	False	NA	-1	True	AATAAA	-17	NA	34294535	34179604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274192_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ENSMUST00000105539.2	chr10	-	1961	12	FSM	ENSMUSG00000019809.17	ENSMUST00000105539.2	1961	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_11	40.2069029063706	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATATAGCTTTGTTT	NA	False	NA	NA	False	AATAAA	-8	NA	13428864	13399885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428692
ENSMUST00000105578.2	chr4	+	1654	7	FSM	ENSMUSG00000029076.15	ENSMUST00000105578.2	1654	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	268.571995313485	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGCTTGGGATGGTTG	NA	False	NA	136	True	NA	NA	NA	156077833	156094775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_156078027_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ENSMUST00000105591.2	chr4	+	773	4	FSM	ENSMUSG00000065990.13	ENSMUST00000105591.2	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	1010.64072086309	7632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACTATAATAAATATTGG	NA	False	NA	-3	True	NA	NA	NA	155916125	155917488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155916224_155916439_155916528_155916808_155917255_155917347
ENSMUST00000105592.8	chr4	+	1029	3	FSM	ENSMUSG00000065990.13	ENSMUST00000105592.8	1029	3	0	0	0	0	multi-exon	FALSE	canonical	3	2371	junction_1	52	2736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTAGGCCGACCTAGA	NA	False	NA	27	True	AATAAA	-17	NA	155916115	155917518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155916528_155916808_155917255_155917347
ENSMUST00000105595.2	chr4	+	874	4	FSM	ENSMUSG00000029038.10	ENSMUST00000105595.2	874	4	0	0	0	0	multi-exon	FALSE	canonical	3	1675	junction_1	40.2685430026411	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACCAAATGCTTTGGCT	NA	False	NA	NA	False	AGTAAA	-26	NA	155789591	155816646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383
ENSMUST00000105600.8	chr4	+	3170	19	FSM	ENSMUSG00000029062.15	ENSMUST00000105600.8	3170	19	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	73.1081770772296	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	3976	False	NA	23	True	ATTAAA	-28	NA	155709339	155734395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ENSMUST00000105613.10	chr4	+	3152	12	FSM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_7	32.1412173266612	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGTAACAGCTTTCTTC	9572	False	NA	38	True	AATAAA	-24	NA	155648156	155675458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ENSMUST00000105632.8	chr4	+	1431	10	FSM	ENSMUSG00000029056.14	ENSMUST00000105632.8	1431	10	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	27.5228300296228	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAGAAGCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	155058989	155065395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
ENSMUST00000105645.9	chr4	+	977	3	FSM	ENSMUSG00000047613.11	ENSMUST00000105645.9	977	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	388	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATACTGTGTTCACA	NA	False	NA	NA	False	AATAAA	-22	NA	154041693	154046375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_154041780_154044987_154045450_154045946
ENSMUST00000105673.8	chr4	-	919	7	FSM	ENSMUSG00000028964.15	ENSMUST00000105673.8	919	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	2143.40985477709	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGTAGTATGTGAAGCA	NA	False	NA	-107	True	NA	NA	NA	150994108	150981695	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150993847
ENSMUST00000105675.8	chr4	-	882	7	FSM	ENSMUSG00000028964.15	ENSMUST00000105675.8	882	7	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_6	2038.03331806807	14788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	5729	False	NA	-1	True	AATAAA	-26	NA	150998894	150981589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150998776
ENSMUST00000105683.9	chr4	-	1460	7	FSM	ENSMUSG00000028972.12	ENSMUST00000105683.9	1460	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3.44802681092953	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTACTATTCTTTT	NA	False	NA	2	True	AATAAA	-28	NA	150282927	150271471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_150271966_150273577_150273702_150276931_150277090_150278164_150278235_150280512_150280606_150281774_150281924_150282555
ENSMUST00000105699.8	chr4	-	1904	7	FSM	ENSMUSG00000041459.16	ENSMUST00000105699.8	1904	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	346.808024064547	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711215	148701182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUST00000105701.9	chr4	+	738	5	FSM	ENSMUSG00000028979.18	ENSMUST00000105701.9	738	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	7.49583217528247	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGGCTGTGTGTCTCT	NA	False	NA	5	True	AATAAA	-15	NA	148687010	148688874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_148687048_148687124_148687354_148687448_148687627_148688143_148688276_148688712
ENSMUST00000105707.2	chr4	+	949	8	FSM	ENSMUSG00000029003.12	ENSMUST00000105707.2	949	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	213.795439137317	1788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGATGAACATGTGTA	NA	False	NA	27	True	AATAAA	-35	NA	148225199	148230153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229582_148229654_148229828
ENSMUST00000105720.8	chr4	-	2594	5	FSM	ENSMUSG00000066000.13	ENSMUST00000105720.8	2594	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	194.219592214586	3084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	147726970	147696393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726791
ENSMUST00000105721.9	chr4	+	1488	4	FSM	ENSMUSG00000078496.10	ENSMUST00000105721.9	1488	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	138.089343059726	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAAACCTTACAAATGT	NA	False	NA	NA	False	NA	NA	NA	147576873	147597943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_147577038_147592042_147592098_147595209_147595337_147596801
ENSMUST00000105733.3	chr4	+	4550	4	FSM	ENSMUSG00000070605.5	ENSMUST00000105733.3	4550	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	316.872564641091	1674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCAGTGCCTGTCAGCT	NA	False	NA	NA	False	NA	NA	NA	146533479	146554749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_146533533_146547961_146548020_146548860_146548988_146550437
ENSMUST00000105734.10	chr4	-	2729	6	FSM	ENSMUSG00000078495.11	ENSMUST00000105734.10	2729	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	98.3963413953995	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	9523	False	NA	NA	False	NA	NA	NA	147894245	147838430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147840693_147842158_147842286_147845677_147845736_147880114_147880182_147891546_147891641_147894124
ENSMUST00000105735.9	chr4	+	3038	5	FSM	ENSMUSG00000056300.15	ENSMUST00000105735.9	3038	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	129.101462036648	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	NA	NA	NA	146586483	146623849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_146586602_146597241_146597335_146616526_146616611_146619877_146620005_146621233
ENSMUST00000105738.9	chr4	-	4006	5	Antisense	novelGene_ENSMUSG00000082615.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3553	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAAATTCCTGTCACTTC	NA	False	NA	NA	False	NA	NA	NA	145431011	145397254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr4_-_145397419_145399301_145399395_145422720_145422806_145425813_145425941_145427474
ENSMUST00000105739.8	chr4	+	3595	4	FSM	ENSMUSG00000078502.11	ENSMUST00000105739.8	3595	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.2289111041209	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	145311735	145351915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_145311905_145343640_145343746_145347127_145347255_145348721
ENSMUST00000105741.2	chr4	+	3044	5	FSM	ENSMUSG00000078503.10	ENSMUST00000105741.2	3044	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	215.70972972956	3250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTGATTGTTTCCAAT	5019	False	NA	NA	False	NA	NA	NA	145241453	145265758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_145241589_145247375_145247456_145257381_145257486_145261385_145261513_145263160
ENSMUST00000105742.8	chr4	+	2996	4	FSM	ENSMUSG00000078503.10	ENSMUST00000105742.8	2996	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	195.188797492752	3315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTGATTGTTTCCAAT	894	False	NA	NA	False	NA	NA	NA	145237328	145265758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_145237496_145257381_145257486_145261385_145261513_145263160
ENSMUST00000105784.8	chr4	-	3036	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	0	0	0	0	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	1852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327235	141303372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ENSMUST00000105804.2	chr4	+	786	4	FSM	ENSMUSG00000028751.14	ENSMUST00000105804.2	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	6.79869268479038	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTTCCATTATTTCTTC	NA	False	NA	NA	False	NA	NA	NA	138606670	138610128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_138606808_138607661_138607801_138607980_138608088_138609725
ENSMUST00000105813.8	chr4	+	3944	5	FSM	ENSMUSG00000041241.13	ENSMUST00000105813.8	3944	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	84.9852928452918	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTACTTTTGGTTGTGGCTG	NA	False	NA	21	True	NA	NA	NA	138161987	138169573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_138162191_138163490_138163711_138164938_138165027_138165552_138165673_138166260
ENSMUST00000105839.8	chr4	+	2071	14	FSM	ENSMUSG00000043411.16	ENSMUST00000105839.8	2071	14	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_9	177.170128514572	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTGTTCCGTGCTTCCA	570	False	NA	NA	False	AATAAA	-6	NA	137321517	137352602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470
ENSMUST00000105840.8	chr4	+	5741	27	FSM	ENSMUSG00000043411.16	ENSMUST00000105840.8	5741	27	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_13	294.548307788895	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	503	False	NA	17	True	ATTAAA	-27	NA	137321450	137385842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ENSMUST00000105850.8	chr4	+	2683	11	FSM	ENSMUSG00000066037.15	ENSMUST00000105850.8	2683	11	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	130.381325349914	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038278	136067992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_136038401_136041400_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUST00000105855.2	chr4	-	2789	16	FSM	ENSMUSG00000037188.8	ENSMUST00000105855.2	2789	16	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	62.4956531821747	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	NA	False	NA	-2	True	AATAAA	-20	NA	135300941	135269198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279194_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
ENSMUST00000105861.8	chr4	-	3797	17	FSM	ENSMUSG00000028809.17	ENSMUST00000105861.8	3797	17	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_5	249.404846271579	2609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTCACATTTATTCG	NA	False	NA	0	True	AATAAA	-19	NA	135080632	135047794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ENSMUST00000105866.3	chr4	+	1275	3	FSM	ENSMUSG00000078521.3	ENSMUST00000105866.3	1275	3	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_2	7.5	1095	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTGGTGTCGTGCTTCC	NA	False	NA	20	True	AATAAA	-20	NA	134238309	134251238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_134238481_134248782_134248913_134250264
ENSMUST00000105867.8	chr4	+	802	5	FSM	ENSMUSG00000028832.12	ENSMUST00000105867.8	802	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	432.634011030108	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGGCTAGTTCTGTATT	NA	False	NA	NA	False	NA	NA	NA	134195719	134200975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200632
ENSMUST00000105872.8	chr4	+	3102	8	FSM	ENSMUSG00000028836.15	ENSMUST00000105872.8	3102	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	95.9345014654716	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTATGAGTGTTTTGCC	2341	False	NA	9	True	AATAAA	-14	NA	134070776	134081788	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_134070864_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ENSMUST00000105874.9	chr4	+	3153	8	FSM	ENSMUSG00000028836.15	ENSMUST00000105874.9	3153	8	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_4	12.5324069711207	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTTGCCTTGCAGA	2081	False	NA	16	True	AATAAA	-21	NA	134070516	134081795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ENSMUST00000105876.9	chr4	-	4509	3	FSM	ENSMUSG00000050890.16	ENSMUST00000105876.9	4509	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	10	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGAAAGTTCTCTTGCT	4291	False	NA	NA	False	AATAAA	-18	NA	134014564	134002313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_134006428_134011556_134011859_134014471
ENSMUST00000105879.2	chr4	-	518	2	FSM	ENSMUSG00000028843.9	ENSMUST00000105879.2	518	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACTGCTTGTGGTGT	9276	False	NA	-12	True	ATTAAA	-15	NA	133856050	133854723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_133855118_133855926
ENSMUST00000105894.11	chr4	-	3135	22	FSM	ENSMUSG00000003644.18	ENSMUST00000105894.11	3135	22	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_6	97.2257582771271	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCCGCTCTTCCTTCTGC	7964	False	NA	-5	True	AATAAA	-18	NA	133615108	133574600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ENSMUST00000105907.9	chr4	-	1484	6	FSM	ENSMUSG00000028857.17	ENSMUST00000105907.9	1484	6	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_4	52.562343935559	1557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	False	NA	-12	True	AATAAA	-14	NA	133005103	132993355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132998273_132998359_133004841
ENSMUST00000105909.4	chr7	-	2462	22	FSM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	0	0	0	0	multi-exon	FALSE	canonical	3	1234	junction_21	93.4109735380392	2477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153793	143111443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ENSMUST00000105910.2	chr4	+	986	6	FSM	ENSMUSG00000028865.15	ENSMUST00000105910.2	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	9.2736184954957	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGACCTATGTCTTGGG	NA	False	NA	20	True	AATAAA	-22	NA	132948120	132951866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132948379_132948753_132948916_132949015_132949088_132949479_132949525_132950913_132951059_132951562
ENSMUST00000105951.8	chr4	-	2326	11	FSM	ENSMUSG00000028896.14	ENSMUST00000105951.8	2326	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	167.562525643415	1241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTGTTTTTATGCGT	NA	False	NA	-14	True	AATAAA	-17	NA	132078947	132059233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132075310_132075432_132078921
ENSMUST00000105962.10	chr4	-	961	8	FSM	ENSMUSG00000028898.16	ENSMUST00000105962.10	961	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	178.321310549015	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCTTCTTCAACTGTAT	2365	False	NA	0	True	AATAAA	-17	NA	132056800	132039073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
ENSMUST00000105964.2	chr4	-	1925	10	FSM	ENSMUSG00000028901.14	ENSMUST00000105964.2	1925	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	18.219511993573	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	1912	False	NA	-58	True	NA	NA	NA	131988913	131952981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
ENSMUST00000105991.9	chr4	+	4614	18	FSM	ENSMUSG00000028580.16	ENSMUST00000105991.9	4614	18	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	156.174288231124	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390669	130508873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ENSMUST00000105992.9	chr4	+	5058	20	FSM	ENSMUSG00000028580.16	ENSMUST00000105992.9	5058	20	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	153.52394310997	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390669	130508873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ENSMUST00000105994.4	chr4	+	1584	10	FSM	ENSMUSG00000074088.7	ENSMUST00000105994.4	1584	10	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_7	51.5407066738946	1627	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAACCTTGTGACTTGG	NA	False	NA	22	True	ATTAAA	-23	NA	130253924	130283819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
ENSMUST00000105999.9	chr4	-	1952	12	FSM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_11	29.3189922368611	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGTCTGGGAGTCTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	130068595	130059394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068515
ENSMUST00000106000.10	chr7	+	1865	8	FSM	ENSMUSG00000025510.15	ENSMUST00000106000.10	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	68.1968938187848	2464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCGAATCAGCTTGCTGA	NA	False	NA	8	True	NA	NA	NA	141047305	141051386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_141047498_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUST00000106003.2	chr7	+	449	4	FSM	ENSMUSG00000025508.14	ENSMUST00000106003.2	449	4	0	0	0	0	multi-exon	FALSE	canonical	3	11523	junction_3	1651.02843370091	40915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2597	False	NA	27	True	AATAAA	-20	NA	141027762	141031263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_141027945_141028638_141028688_141030916_141031016_141031144
ENSMUST00000106004.8	chr7	+	421	5	FSM	ENSMUSG00000025508.14	ENSMUST00000106004.8	421	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	6154.22628666675	19379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2459	False	NA	27	True	AATAAA	-20	NA	141027624	141031263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_141027655_141027820_141027945_141028638_141028688_141030916_141031016_141031144
ENSMUST00000106007.10	chr7	-	2546	10	FSM	ENSMUSG00000019082.19	ENSMUST00000106007.10	2546	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	39.7436228287703	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCTTTAAGAGTCTGT	3505	False	NA	-19	True	AATAAA	-18	NA	141014507	141009661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141014443
ENSMUST00000106041.3	chr3	+	1971	11	FSM	ENSMUSG00000028175.16	ENSMUST00000106041.3	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	17.3262806164508	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGCTTCTTTATTTAT	NA	False	NA	NA	False	AAAACA	-43	NA	159201094	159235096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ENSMUST00000106047.4	chr4	+	618	6	FSM	ENSMUSG00000057572.16	ENSMUST00000106047.4	618	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	246.415421595321	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGTAGCAGTGGTCT	NA	False	NA	17	True	TTTAAA	-24	NA	129229839	129240826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129229933_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ENSMUST00000106048.10	chr7	-	1416	7	FSM	ENSMUSG00000025486.18	ENSMUST00000106048.10	1416	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	42.0135560133737	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCATCCTGTCTCTTTG	NA	False	NA	-14	True	AATAAA	-14	NA	140461782	140443582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458059_140461675
ENSMUST00000106054.4	chr4	+	2909	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	0	0	0	0	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	4680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAACACAGCTTTGTCA	713	False	NA	NA	False	AAAACA	-42	NA	129083552	129113400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ENSMUST00000106057.8	chr3	+	2737	11	FSM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_9	297.644569915193	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTCTGACTGAATGTT	NA	False	NA	3	True	AATAAA	-11	NA	157240024	157254013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157251711_157251787_157252311
ENSMUST00000106058.8	chr3	+	2924	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	0	0	0	0	multi-exon	TRUE	canonical	3	697	junction_8	81.8057017542553	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTTTTTGTCACTGT	NA	False	NA	37	True	AATAAA	-45	NA	157239796	157254047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ENSMUST00000106091.9	chr4	-	1623	2	FSM	ENSMUSG00000042367.13	ENSMUST00000106091.9	1623	2	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	0	4086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	False	NA	-5	True	AATAAA	-17	NA	127222954	127219027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_127220565_127222868
ENSMUST00000106099.8	chr4	-	2982	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106099.8	2982	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	144.172515708488	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAACTTGCAACTTTGAG	NA	False	NA	NA	False	AATGAA	-11	NA	126954917	126941434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_126943406_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ENSMUST00000106115.8	chr11	-	2239	7	FSM	ENSMUSG00000039294.15	ENSMUST00000106115.8	2239	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	22.8284666346404	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTTTCTGTTTTCTGC	NA	False	NA	0	True	AATAAA	-22	NA	121120131	121113413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121120038
ENSMUST00000106117.8	chr11	+	2149	13	FSM	ENSMUSG00000039307.17	ENSMUST00000106117.8	2149	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	4.64503916979059	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCCACCAGCAGAAACTCT	NA	False	NA	4	True	AATAAA	-20	NA	121095260	121113473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105585_121105751_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121111988_121112061_121112164_121112326_121112417_121113038
ENSMUST00000106144.8	chr7	-	1045	7	FSM	ENSMUSG00000030979.14	ENSMUST00000106144.8	1045	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	27.2299875545734	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTGTTGCTTGTACTT	NA	False	NA	NA	False	AATAAA	-14	NA	133310788	133293862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_133294386_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
ENSMUST00000106145.10	chr7	-	1644	10	FSM	ENSMUSG00000030979.14	ENSMUST00000106145.10	1644	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	18.4477908610847	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATCTGAGTATGGTAGC	NA	False	NA	NA	False	NA	NA	NA	133310798	133288084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310652
ENSMUST00000106146.8	chr7	-	1483	10	FSM	ENSMUSG00000030979.14	ENSMUST00000106146.8	1483	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	22.221666659722	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATCTGAGTATGGTAGC	NA	False	NA	NA	False	NA	NA	NA	133310687	133288084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304149_133310652
ENSMUST00000106148.10	chr11	-	830	7	FSM	ENSMUSG00000039450.12	ENSMUST00000106148.10	830	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	29.9035486560077	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGATCTGTGCTATCTG	6916	False	NA	-4	True	AATAAA	-37	NA	120618069	120616224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120616434_120616563_120616723_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
ENSMUST00000106154.8	chr11	-	873	6	FSM	ENSMUSG00000025144.18	ENSMUST00000106154.8	873	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	397.451380674417	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604558	120601767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120603265_120603539_120604518
ENSMUST00000106158.9	chr11	+	1690	15	FSM	ENSMUSG00000025142.19	ENSMUST00000106158.9	1690	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	252.602010107212	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563881	120600270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUST00000106192.9	chr3	+	2425	16	FSM	ENSMUSG00000028256.17	ENSMUST00000106192.9	2425	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	23.1944437791084	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCAAGTGTCTCGCTATA	NA	False	NA	NA	False	AATAAA	-43	NA	144824349	144859676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_144824544_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ENSMUST00000106194.8	chr11	+	530	2	FSM	ENSMUSG00000044034.12	ENSMUST00000106194.8	530	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTAAGGGTTGCTGGA	1208	False	NA	NA	False	AATAAA	-14	NA	120499302	120499919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120499554_120499640
ENSMUST00000106197.10	chr11	-	1867	6	FSM	ENSMUSG00000025132.14	ENSMUST00000106197.10	1867	6	0	0	0	0	multi-exon	TRUE	canonical	3	3168	junction_5	160.793780974265	7739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGGTCTGTGCAGCTT	NA	False	NA	-10	True	AATAAA	-22	NA	120472450	120468929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120472347
ENSMUST00000106205.9	chr11	+	2900	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_14	47.8204313112466	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGATTGATTGTTCG	8182	False	NA	13	True	AATAAA	-14	NA	120358460	120374805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ENSMUST00000106211.3	chr3	+	1178	4	FSM	ENSMUSG00000037072.17	ENSMUST00000106211.3	1178	4	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_3	635.117486944126	2570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTGATTTTAAATTAG	NA	False	NA	9	True	AATAAA	-11	NA	144276453	144303422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144302583
ENSMUST00000106215.11	chr11	-	1827	5	FSM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	0	0	0	0	multi-exon	FALSE	canonical	3	5636	junction_4	437.152933765747	53867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTTTTTCTGGTTTG	NA	False	NA	-22	True	AATAAA	-17	NA	120238917	120236516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794
ENSMUST00000106223.4	chr11	+	781	3	FSM	ENSMUSG00000078572.4	ENSMUST00000106223.4	781	3	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_2	30.5	3132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGCTGGAGAGATTGT	NA	False	NA	NA	False	AATAAA	-18	NA	119989753	119991531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_119989892_119989973_119990085_119990999
ENSMUST00000106241.8	chr4	+	3050	15	FSM	ENSMUSG00000011257.20	ENSMUST00000106241.8	3050	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_10	103.994922364272	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGCCAGTTTTATGTT	NA	False	NA	8	True	AATAAA	-31	NA	123176624	123192625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189067_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ENSMUST00000106243.8	chr4	+	3111	14	FSM	ENSMUSG00000011257.20	ENSMUST00000106243.8	3111	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_10	102.125111806737	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACAGGGTTTCTCTGTG	NA	False	NA	9	True	AATAAA	-23	NA	123176617	123192718	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ENSMUST00000106255.8	chr4	-	2737	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106255.8	2737	13	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_12	193.312139642945	2215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGATGTTTTCAGTA	NA	False	NA	-7	True	AATAAA	-25	NA	122779837	122752839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779625
ENSMUST00000106257.10	chr4	-	2768	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106257.10	2768	13	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_12	172.387322297462	2933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGATGTTTTCAGTA	NA	False	NA	-7	True	AATAAA	-25	NA	122779849	122752839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
ENSMUST00000106259.9	chr11	+	3633	20	FSM	ENSMUSG00000025579.15	ENSMUST00000106259.9	3633	20	0	0	0	0	multi-exon	TRUE	canonical	3	393	junction_7	40.3001893687597	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119158712	119176280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ENSMUST00000106272.8	chr7	+	1725	7	FSM	ENSMUSG00000042289.12	ENSMUST00000106272.8	1725	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	32.540999779765	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTACCTTTTACCCA	1894	False	NA	14	True	AATAAA	-15	NA	127399785	127402974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401500_127401571_127401957
ENSMUST00000106291.10	chr3	+	1512	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	0	0	0	0	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	1773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135143994	135171819	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUST00000106292.8	chr7	+	2175	13	FSM	ENSMUSG00000030822.16	ENSMUST00000106292.8	2175	13	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	75.4609446446748	390	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGACTCCTTTGTGCC	NA	False	NA	9	True	TATAAA	-14	NA	127069542	127075931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127069596_127070156_127070292_127071077_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
ENSMUST00000106300.2	chr7	-	1015	3	FSM	ENSMUSG00000045251.14	ENSMUST00000106300.2	1015	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	2.5	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	4	True	NA	-4	True	ATTAAA	-17	NA	127021206	127018138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127018814_127020576_127020691_127020980
ENSMUST00000106313.8	chr7	-	1285	10	FSM	ENSMUSG00000000486.14	ENSMUST00000106313.8	1285	10	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_7	44.4297197830461	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAACCAGATCCCTCCAA	NA	False	NA	NA	False	NA	NA	NA	126817475	126813814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312
ENSMUST00000106314.8	chr7	-	1486	11	FSM	ENSMUSG00000000486.14	ENSMUST00000106314.8	1486	11	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_10	48.9043965303734	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTCCCGCCTTCCCCCA	NA	False	NA	-22	True	AATAAA	-3	NA	126817670	126813633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817578
ENSMUST00000106317.2	chr4	-	613	9	FSM	ENSMUSG00000060288.14	ENSMUST00000106317.2	613	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	164.818413337224	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAATCCTTGTGACCT	9629	False	NA	NA	False	AATAAA	-21	NA	119177696	119168510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_119168634_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
ENSMUST00000106318.8	chr4	-	800	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106318.8	800	10	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_8	163.771144144263	3291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9582	False	NA	-3	True	AATAAA	-19	NA	119177743	119157206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_119157381_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
ENSMUST00000106321.9	chr4	-	1288	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106321.9	1288	10	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_8	172.260640876149	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTACCTTGTCTAGCCTG	9644	False	NA	-2	True	NA	NA	NA	119177681	119164356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_119165081_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
ENSMUST00000106342.8	chr7	-	1840	7	FSM	ENSMUSG00000030689.16	ENSMUST00000106342.8	1840	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	388.334763945863	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGCTTGGATTTCT	9346	False	NA	1	True	ATTAAA	-31	NA	126460858	126450751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126452164_126456397_126456515_126456847_126456895_126457045_126457125_126460411_126460465_126460647_126460719_126460797
ENSMUST00000106343.3	chr7	-	1973	7	FSM	ENSMUSG00000030689.16	ENSMUST00000106343.3	1973	7	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_1	102.030496530313	1745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTTTGTGCTTGGA	9194	False	NA	-4	True	ATTAAA	-26	NA	126461010	126450756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ENSMUST00000106345.3	chr4	+	684	4	FSM	ENSMUSG00000028643.12	ENSMUST00000106345.3	684	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	208.740668454105	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTTCTTGCTTTAGAG	NA	False	NA	11	True	AATAAA	-14	NA	119052603	119058495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_119052684_119053068_119053219_119055955_119056008_119058093
ENSMUST00000106348.8	chr7	-	1460	9	FSM	ENSMUSG00000030695.17	ENSMUST00000106348.8	1460	9	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_8	6626.46755325754	1771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126399619	126394406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126399459
ENSMUST00000106349.2	chr11	+	2932	10	FSM	ENSMUSG00000059248.14	ENSMUST00000106349.2	2932	10	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_1	107.436803129406	1289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCTCTTTGGCAAGACC	NA	False	NA	102	True	AATAAA	-27	NA	117223170	117253150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUST00000106355.5	chr4	-	1588	2	FSM	ENSMUSG00000045268.14	ENSMUST00000106355.5	1588	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTACTTATTTGGGGA	NA	False	NA	2	True	AGTAAA	-19	NA	119031392	119026709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_119028240_119031334
ENSMUST00000106369.2	chr7	+	642	2	FSM	ENSMUSG00000047721.9	ENSMUST00000106369.2	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	2580	junction_1	0	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTCAGTGTGCTGTT	1148	False	NA	22	True	ATTAAA	-17	NA	126295144	126295869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_126295272_126295354
ENSMUST00000106378.8	chr11	+	1988	5	FSM	ENSMUSG00000020812.19	ENSMUST00000106378.8	1988	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	18.9340962287615	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	3	True	AATAAA	-16	NA	116562494	116566624	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125
ENSMUST00000106384.10	chr4	+	1743	8	FSM	ENSMUSG00000006392.17	ENSMUST00000106384.10	1743	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	317.693473110706	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGGCTCAGGGTTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	118266533	118272979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_118266584_118268081_118268201_118268722_118268771_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118270923_118271920
ENSMUST00000106403.8	chr4	-	4536	22	FSM	ENSMUSG00000033326.16	ENSMUST00000106403.8	4536	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_21	18.9977919709961	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGGTGCATTACCTTG	NA	False	NA	-10	True	TATAAA	-14	NA	118037175	117994202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034761_118037089
ENSMUST00000106406.9	chr4	-	4663	22	FSM	ENSMUSG00000033326.16	ENSMUST00000106406.9	4663	22	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_21	11.6270464270502	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGACTGTGGTCTGCCCC	NA	False	NA	-1	True	AATAAA	-16	NA	118037240	117994153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034774_118037089
ENSMUST00000106407.9	chr7	+	2234	13	FSM	ENSMUSG00000030727.13	ENSMUST00000106407.9	2234	13	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	15.3541525327841	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTGCCTTGTGCCTGC	NA	False	NA	12	True	AATAAA	-15	NA	126028237	126045073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126043602_126043694_126043751_126043991_126044109_126044468
ENSMUST00000106410.8	chr4	-	2225	12	FSM	ENSMUSG00000028538.13	ENSMUST00000106410.8	2225	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	18.1899981599189	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCCTCCTGTTGTTTTC	1862	False	NA	-5	True	AATAAA	-14	NA	117992111	117789354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991930
ENSMUST00000106425.4	chr11	-	2330	15	FSM	ENSMUSG00000020780.16	ENSMUST00000106425.4	2330	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	170.438824383246	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCTGGTTTTTGCA	9899	False	NA	-2	True	ATTAAA	-17	NA	116164961	116135991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116162738_116162806_116164751
ENSMUST00000106439.2	chr11	-	1411	9	FSM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	0	0	0	0	multi-exon	FALSE	canonical	3	763	junction_8	33.509093914936	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTCTTCACTTTCGGG	407	False	NA	-2	True	AATAAA	-20	NA	116029694	116022642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267_116029448_116029536
ENSMUST00000106442.9	chr7	-	3336	20	FSM	ENSMUSG00000030766.16	ENSMUST00000106442.9	3336	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	53.0955862029814	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969109	122878493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ENSMUST00000106448.9	chr4	+	1555	12	FSM	ENSMUSG00000028683.15	ENSMUST00000106448.9	1555	12	0	0	0	0	multi-exon	TRUE	canonical	3	567	junction_7	49.9305302519377	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCAGTGGTAGAG	NA	False	NA	20	True	AATAAA	-20	NA	116876598	116944049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
ENSMUST00000106462.9	chr4	+	1112	10	FSM	ENSMUSG00000028689.15	ENSMUST00000106462.9	1112	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.3680624821877	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCTCTGTAAATCTT	5618	False	NA	15	True	AATAAA	-19	NA	116565767	116572300	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116565854_116566458_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
ENSMUST00000106464.3	chr4	+	1213	10	FSM	ENSMUSG00000028689.15	ENSMUST00000106464.3	1213	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	20.3239201040316	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCTCTGTAAATCTT	5977	False	NA	15	True	AATAAA	-19	NA	116566126	116572300	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116566292_116566436_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
ENSMUST00000106475.2	chr4	+	2642	12	FSM	ENSMUSG00000034042.17	ENSMUST00000106475.2	2642	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	94.7459412768154	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTTGTTGAATACTTCA	NA	False	NA	NA	False	TATAAA	-18	NA	116415275	116450233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116415347_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ENSMUST00000106478.9	chr4	-	1962	5	FSM	ENSMUSG00000055900.15	ENSMUST00000106478.9	1962	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	29.1150734156725	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTCAT	NA	False	NA	-108	True	NA	NA	NA	116413133	116408829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_116409321_116409518_116409542_116409678_116410927_116411964_116412101_116413069
ENSMUST00000106479.8	chr4	+	2118	9	FSM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	9.43977621556783	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAGCAACAGTACAA	NA	False	NA	NA	False	AATAAA	-19	NA	116364745	116395432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
ENSMUST00000106498.8	chr4	+	2719	22	FSM	ENSMUSG00000028700.15	ENSMUST00000106498.8	2719	22	0	0	0	0	multi-exon	TRUE	canonical	3	321	junction_9	36.7984644262092	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007714	116017041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ENSMUST00000106501.8	chr3	+	2887	4	FSM	ENSMUSG00000027963.15	ENSMUST00000106501.8	2887	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.9786236911983	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCACTGTGTTAATAACT	10	False	NA	1	True	AATAAA	-12	NA	115801126	115822644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_115801532_115817655_115818084_115818973_115819045_115820661
ENSMUST00000106507.9	chr11	-	1656	5	FSM	ENSMUSG00000020743.16	ENSMUST00000106507.9	1656	5	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_2	39.92101576864	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503329	115498743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728
ENSMUST00000106508.10	chr11	-	3582	16	FSM	ENSMUSG00000020740.14	ENSMUST00000106508.10	3582	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	108.404673945976	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3381	False	NA	-2	True	AATAAA	-15	NA	115494877	115475080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ENSMUST00000106513.10	chr4	+	2552	14	FSM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	55.5404857930697	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCAGCCTTGGTGGT	NA	False	NA	10	True	AATAAA	-16	NA	115696429	115736447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_115696479_115702818_115702863_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ENSMUST00000106516.2	chr7	+	1069	4	FSM	ENSMUSG00000030922.13	ENSMUST00000106516.2	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	24.9977776790036	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTTTGTTGATTTT	NA	False	NA	12	True	TATAAA	-23	NA	119499330	119515979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_119499532_119509026_119509186_119513395_119513489_119515363
ENSMUST00000106518.9	chr7	+	875	4	FSM	ENSMUSG00000030922.13	ENSMUST00000106518.9	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	16.3095064303001	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACAGCTTTAGATTGATC	NA	False	NA	-11	True	NA	NA	NA	119495083	119515956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_119495114_119509026_119509186_119513395_119513489_119515363
ENSMUST00000106525.9	chr4	+	2792	11	FSM	ENSMUSG00000034210.15	ENSMUST00000106525.9	2792	11	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_6	11.0657128102983	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCAGAATATGTCTTTT	NA	False	NA	141	True	NA	NA	NA	115594940	115631632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ENSMUST00000106536.8	chr3	-	1839	15	FSM	ENSMUSG00000027981.15	ENSMUST00000106536.8	1839	15	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	14.9497457489813	306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCTAATTTTTCATTA	NA	False	NA	-1	True	AATAAA	-16	NA	113423798	113399112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_113399297_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
ENSMUST00000106537.8	chr11	-	682	7	FSM	ENSMUSG00000034566.11	ENSMUST00000106537.8	682	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	1501.20529353361	7386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115310743	115306514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310017_115310120_115310717
ENSMUST00000106548.9	chr4	+	887	5	FSM	ENSMUSG00000028716.16	ENSMUST00000106548.9	887	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.87082869338697	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCACGGGCCTATTTCT	NA	False	NA	NA	False	NA	NA	NA	114945919	114951096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_114946004_114946235_114946410_114948338_114948448_114950117_114950214_114950672
ENSMUST00000106553.8	chr7	+	3018	30	FSM	ENSMUSG00000030982.20	ENSMUST00000106553.8	3018	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	118.758810925395	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTGTCTCGGTGTGTG	NA	False	NA	10	True	ATTAAA	-21	NA	118339969	118440712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ENSMUST00000106557.8	chr7	+	5073	16	FSM	ENSMUSG00000033904.17	ENSMUST00000106557.8	5073	16	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_14	14.3789970288458	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	NA	False	NA	10	True	AATAAA	-20	NA	118311774	118336247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118332109_118332196_118334490
ENSMUST00000106599.8	chr11	+	457	4	FSM	ENSMUSG00000057322.13	ENSMUST00000106599.8	457	4	0	0	0	0	multi-exon	FALSE	canonical	3	12129	junction_3	3589.14031799012	156183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559434	114563157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_114559641_114559731_114559793_114562559_114562683_114563090
ENSMUST00000106602.10	chr11	+	371	5	FSM	ENSMUSG00000057322.13	ENSMUST00000106602.10	371	5	0	0	0	0	multi-exon	FALSE	canonical	3	6598	junction_1	5536.08152825625	187794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559349	114563157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ENSMUST00000106607.2	chr7	+	1153	3	FSM	ENSMUSG00000030663.13	ENSMUST00000106607.2	1153	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	845.5	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGATTGTGATGCCTT	NA	False	NA	26	True	AATAAA	-17	NA	115692575	115704442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_115692623_115702445_115702556_115703446
ENSMUST00000106609.8	chr3	+	2043	12	FSM	ENSMUSG00000027884.17	ENSMUST00000106609.8	2043	12	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_1	36.8117839559091	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6596	False	NA	6	True	AATAAA	-18	NA	108561228	108586156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ENSMUST00000106617.8	chr11	-	1123	7	FSM	ENSMUSG00000018727.20	ENSMUST00000106617.8	1123	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	84.0094240745247	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113599793	113588997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_113589493_113590661_113590740_113592881_113592922_113593238_113593336_113594096_113594193_113597242_113597396_113599629
ENSMUST00000106621.4	chr11	+	2062	5	FSM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	30.335622624235	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575272	113585473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220_113583329_113585337
ENSMUST00000106622.3	chr3	-	2752	3	FSM	ENSMUSG00000068732.6	ENSMUST00000106622.3	2752	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	80.5	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTGCTTTGTCAT	5570	False	NA	-14	True	AATAAA	-15	NA	108469486	108463740	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_108466277_108467502_108467635_108469402
ENSMUST00000106633.10	chr11	-	2688	10	FSM	ENSMUSG00000041654.16	ENSMUST00000106633.10	2688	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	154.822558728882	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7766	False	NA	-2	True	AATAAA	-19	NA	113456585	113135678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ENSMUST00000106640.2	chr7	+	1465	13	FSM	ENSMUSG00000030770.16	ENSMUST00000106640.2	1465	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.63171380199464	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCGTGCTCAAGTTCAT	NA	False	NA	NA	False	AATAAA	-34	NA	112118907	112188177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_112119036_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ENSMUST00000106644.9	chr4	+	3784	33	FSM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_3	173.040085222326	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAGACGTGTGTGCAT	NA	False	NA	39	True	AATAAA	-31	NA	108857966	108918358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_108858362_108870706_108871038_108873848_108873983_108874823_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ENSMUST00000106685.9	chr3	-	1153	8	FSM	ENSMUSG00000068762.12	ENSMUST00000106685.9	1153	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	8.51649060616507	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCCTGTCGTATT	1790	False	NA	-1	True	AGTAAA	-16	NA	107851065	107846162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107846633_107848308_107848420_107848504_107848601_107849448_107849550_107849648_107849731_107850017_107850083_107850560_107850637_107850913
ENSMUST00000106736.3	chr3	+	1669	3	FSM	ENSMUSG00000056260.16	ENSMUST00000106736.3	1669	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	9.5	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTATGGCTTTGTTTTGT	NA	False	NA	31	True	AATAAA	-43	NA	106629208	106643893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_106629423_106641673_106641956_106642720
ENSMUST00000106749.8	chr4	+	607	6	FSM	ENSMUSG00000063172.14	ENSMUST00000106749.8	607	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	69.6746725862418	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATTTTTTTTATATAA	NA	False	NA	8	True	ATTAAA	-19	NA	107111099	107137135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_107111160_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ENSMUST00000106750.5	chr11	+	1311	10	FSM	ENSMUSG00000020720.14	ENSMUST00000106750.5	1311	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	899.695133549878	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGATGCTTTTAGAA	NA	False	NA	-46	True	NA	NA	NA	107370402	107388559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_107370511_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ENSMUST00000106774.8	chr3	-	3718	21	FSM	ENSMUSG00000002227.16	ENSMUST00000106774.8	3718	21	0	0	0	0	multi-exon	FALSE	canonical	2	35	junction_17	372.241249057651	1864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725879	104702151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711702_104711786_104712030_104712219_104712424_104725251_104725473_104725573
ENSMUST00000106781.2	chr4	+	3046	2	FSM	ENSMUSG00000043572.8	ENSMUST00000106781.2	3046	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGTGTGTGTGTGTGTG	NA	False	NA	3	True	AATAAA	-18	NA	106508294	106512477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_106508329_106509465
ENSMUST00000106796.9	chr11	-	3441	16	FSM	ENSMUSG00000020717.20	ENSMUST00000106796.9	3441	16	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	373.181135643269	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	9424	False	NA	-10	True	AATAAA	-18	NA	106606220	106545043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844
ENSMUST00000106849.9	chr7	+	2578	8	FSM	ENSMUSG00000056144.15	ENSMUST00000106849.9	2578	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	5.31843156256751	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGAATCTGTTCATT	NA	False	NA	7	True	ATTAAA	-15	NA	103893663	103911441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_103893800_103896737_103897358_103897893_103897990_103898601_103898833_103908619_103908643_103909324_103909426_103909684_103909712_103910097
ENSMUST00000106927.2	chr4	+	1754	4	FSM	ENSMUSG00000035212.15	ENSMUST00000106927.2	1754	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	275.740215903786	1499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGTTGCATTTCATAAA	8290	False	NA	8	True	AATAAA	-20	NA	101504989	101516561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_101505023_101509595_101509672_101513374_101513493_101515034
ENSMUST00000106945.8	chr4	+	4175	6	FSM	ENSMUSG00000028527.19	ENSMUST00000106945.8	4175	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	107.967402487973	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGATGGAATTTCATAA	NA	False	NA	19	True	AATAAA	-17	NA	101276515	101324192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_101276599_101276925_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
ENSMUST00000106946.8	chr4	+	4360	6	FSM	ENSMUSG00000028527.19	ENSMUST00000106946.8	4360	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	102.253410701062	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGATGGAATTTCATAA	NA	False	NA	19	True	AATAAA	-17	NA	101276485	101324192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_101276754_101276925_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
ENSMUST00000106950.8	chr7	+	3131	10	FSM	ENSMUSG00000099481.7	ENSMUST00000106950.8	3131	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	31.0606734006004	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTTGCCGATCTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	101714717	101732969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_101715012_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ENSMUST00000106978.8	chr7	+	841	6	FSM	ENSMUSG00000030649.19	ENSMUST00000106978.8	841	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	219.67922068325	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTATTCCCTGTTTGT	NA	False	NA	24	True	AATAAA	-24	NA	101530531	101548750	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_101530610_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUST00000106981.8	chr7	-	960	4	FSM	ENSMUSG00000001827.13	ENSMUST00000106981.8	960	4	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_2	18.9267594221045	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGTGTGAATGAGAATG	8098	False	NA	0	True	AATAAA	-31	NA	101513352	101507537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131
ENSMUST00000106982.8	chr7	-	1039	5	FSM	ENSMUSG00000001827.13	ENSMUST00000106982.8	1039	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	136.80711787038	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGTGTGAATGAGAATG	4836	False	NA	0	True	AATAAA	-31	NA	101516614	101507537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101516484
ENSMUST00000106986.9	chr7	-	1286	7	FSM	ENSMUSG00000001827.13	ENSMUST00000106986.9	1286	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	140.150415229099	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGTGTGAATGAGAATG	1560	False	NA	0	True	AATAAA	-31	NA	101519890	101507537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604_101517759_101518363_101518512_101519815
ENSMUST00000107037.8	chr11	+	1221	3	FSM	ENSMUSG00000043372.13	ENSMUST00000107037.8	1221	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	7	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGTGGCTACAATTGA	NA	False	NA	NA	False	ATTAAA	-18	NA	103024139	103030017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_103024249_103024860_103024968_103029012
ENSMUST00000107048.8	chr7	+	2617	8	FSM	ENSMUSG00000030704.15	ENSMUST00000107048.8	2617	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	284.236032988394	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTTCACATTCTTTATT	NA	False	NA	11	True	AATAAA	-19	NA	100256616	100290475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_100256728_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ENSMUST00000107060.8	chr11	-	3339	28	FSM	ENSMUSG00000020929.15	ENSMUST00000107060.8	3339	28	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_26	289.083827865911	1756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTTTGCTGCTTTC	8448	False	NA	-5	True	TATAAA	-22	NA	102771811	102729298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762009_102768435_102768545_102771720
ENSMUST00000107076.10	chr3	+	2858	14	FSM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	28.3212760050852	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	2588	False	NA	5	True	AATAAA	-15	NA	96603699	96613278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ENSMUST00000107077.4	chr3	+	2695	15	FSM	ENSMUSG00000028101.19	ENSMUST00000107077.4	2695	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	45.7727304969111	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGGGAAGGGATGTTGT	3321	False	NA	16	True	AATAAA	-26	NA	96604432	96613289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96604512_96606735_96606970_96607074_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ENSMUST00000107081.8	chr11	-	818	3	FSM	ENSMUSG00000078640.10	ENSMUST00000107081.8	818	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	3.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTCTTTTTTTTT	8238	False	NA	NA	False	NA	NA	NA	102470287	102467223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102467624_102469575_102469722_102470015
ENSMUST00000107096.2	chr7	-	952	6	FSM	ENSMUSG00000030744.14	ENSMUST00000107096.2	952	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	5578.96687210096	3770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTAAACTCATGAGTATG	8422	False	NA	-20	True	AATAAA	-21	NA	99132858	99127110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_99127523_99129110_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ENSMUST00000107098.8	chr11	-	1606	12	FSM	ENSMUSG00000018677.10	ENSMUST00000107098.8	1606	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	1380.93231173247	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAAAAAAAACCAA	7743	False	NA	NA	False	NA	NA	NA	102298315	102293810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296629_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ENSMUST00000107115.8	chr11	-	3199	19	FSM	ENSMUSG00000020923.18	ENSMUST00000107115.8	3199	19	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_13	159.309621666601	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGTCTA	9137	False	NA	60	True	NA	NA	NA	102207530	102196749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
ENSMUST00000107119.9	chr11	-	3013	20	FSM	ENSMUSG00000020923.18	ENSMUST00000107119.9	3013	20	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_19	227.252992142399	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	8554	False	NA	-9	True	NA	NA	NA	102208113	102196818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102207999
ENSMUST00000107131.2	chr4	-	895	3	FSM	ENSMUSG00000044303.7	ENSMUST00000107131.2	895	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGGCCGCGAAGGGAATAA	NA	False	NA	-73	True	NA	NA	NA	89212890	89192777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_89193012_89194881_89195223_89212570
ENSMUST00000107154.4	chr3	+	1444	16	FSM	ENSMUSG00000028109.15	ENSMUST00000107154.4	1444	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_15	107.711260114974	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95466988	95494907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95492845_95492901_95494691
ENSMUST00000107156.9	chr11	-	2015	4	FSM	ENSMUSG00000020922.12	ENSMUST00000107156.9	2015	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	445.4737802485	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTCAGGTTTGTGC	6423	False	NA	-1	True	AATAAA	-23	NA	102076055	102053322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102075948
ENSMUST00000107170.3	chr3	-	4622	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107170.3	4622	22	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_11	31.3428122874475	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1642	False	NA	-4	True	ATTAAA	-15	NA	95264513	95230835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ENSMUST00000107187.9	chr3	+	2827	10	FSM	ENSMUSG00000038712.17	ENSMUST00000107187.9	2827	10	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	26.9118359384908	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTCCTACCTTGGAG	NA	False	NA	15	True	AATAAA	-16	NA	95190254	95203477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ENSMUST00000107208.8	chr11	+	4344	23	FSM	ENSMUSG00000017119.21	ENSMUST00000107208.8	4344	23	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_22	52.5711049377904	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	978	False	NA	21	True	AATAAA	-24	NA	101443683	101472777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
ENSMUST00000107213.8	chr11	+	4339	23	FSM	ENSMUSG00000017119.21	ENSMUST00000107213.8	4339	23	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_16	37.5030852725303	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	978	False	NA	21	True	AATAAA	-24	NA	101443683	101472777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ENSMUST00000107229.2	chr3	-	724	2	FSM	ENSMUSG00000028126.17	ENSMUST00000107229.2	724	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCTTGTAGAGGAGTTG	1305	False	NA	NA	False	AATAAA	-33	NA	95014134	95004353	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95004630_95013686
ENSMUST00000107232.9	chr3	-	3437	14	FSM	ENSMUSG00000028126.17	ENSMUST00000107232.9	3437	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.045709519341	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATTTTTAAATGCTTTTA	1272	False	NA	-3	True	AATAAA	-42	NA	95014167	94965855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990134_95013686
ENSMUST00000107233.9	chr3	-	3663	15	FSM	ENSMUSG00000028126.17	ENSMUST00000107233.9	3663	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_14	7.6080650011172	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAAATGCTTTTATT	1198	False	NA	-1	True	AATAAA	-44	NA	95014241	94965853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990140_95013686
ENSMUST00000107236.9	chr3	-	3618	15	FSM	ENSMUSG00000028126.17	ENSMUST00000107236.9	3618	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_14	9.68798961896341	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTAGTGTAGTAGTCA	1253	False	NA	12	True	ATTAAA	-35	NA	95014186	94965840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990137_95013686
ENSMUST00000107237.8	chr3	-	1332	10	FSM	ENSMUSG00000005625.16	ENSMUST00000107237.8	1332	10	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_3	333.422654699207	5864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATAGTGATAGCTTTG	NA	False	NA	-10	True	AATAAA	-25	NA	94949925	94940004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ENSMUST00000107249.8	chr11	+	732	4	FSM	ENSMUSG00000063316.14	ENSMUST00000107249.8	732	4	0	0	0	0	multi-exon	FALSE	canonical	3	8302	junction_3	2031.83972465022	125099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	2389	False	NA	62	True	ATTAAA	-18	NA	101333271	101336355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101333632_101334326_101334497_101336045_101336157_101336264
ENSMUST00000107252.9	chr11	-	853	7	FSM	ENSMUSG00000097487.8	ENSMUST00000107252.9	853	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	3.45205252953466	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCTTCCCTTCCTGTA	NA	False	NA	-10	True	AATAAA	-14	NA	101315495	101309637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_101310013_101310500_101310555_101312690_101312781_101314605_101314705_101314802_101314870_101314980_101315095_101315441
ENSMUST00000107284.8	chr11	-	4207	21	FSM	ENSMUSG00000006920.15	ENSMUST00000107284.8	4207	21	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_20	14.6399282785128	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCAAGTTGTGTCCTC	2605	False	NA	-7	True	AATAAA	-15	NA	101117289	101081940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ENSMUST00000107285.8	chr11	-	4193	21	FSM	ENSMUSG00000006920.15	ENSMUST00000107285.8	4193	21	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_20	14.6399282785128	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGCAAGTTGTGTCCT	2618	False	NA	-8	True	AATAAA	-14	NA	101117276	101081941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ENSMUST00000107295.10	chr11	-	3179	8	FSM	ENSMUSG00000017802.15	ENSMUST00000107295.10	3179	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	32.1222155944119	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCAATTGTTATTTTT	9845	False	NA	NA	False	CATAAA	-22	NA	101010669	100987147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100994715_100994747_100997132_100997240_101010366
ENSMUST00000107302.8	chr11	+	1826	8	FSM	ENSMUSG00000017801.16	ENSMUST00000107302.8	1826	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	91.1912097446562	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTTTAAGTCCTTGT	8223	False	NA	18	True	AATAAA	-22	NA	100978102	100983033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100978194_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUST00000107303.10	chr11	+	1736	7	FSM	ENSMUSG00000017801.16	ENSMUST00000107303.10	1736	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	122.609701446863	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTTTAAGTCCTTGT	8223	False	NA	18	True	AATAAA	-22	NA	100978102	100983033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100978194_100978579_100978617_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUST00000107308.4	chr11	+	2386	9	FSM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	20.9388992069784	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3571	False	NA	25	True	ATTAAA	-16	NA	100973450	100977445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ENSMUST00000107343.8	chr3	-	3118	4	FSM	ENSMUSG00000001017.16	ENSMUST00000107343.8	3118	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	621.962664117032	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	-1	True	NA	NA	NA	90416757	90406262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90407415_90410402_90410590_90413414_90414934_90416497
ENSMUST00000107364.8	chr11	-	1915	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	14.961283367412	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGATTGTTGGTGTCT	NA	False	NA	-10	True	ATTAAA	-17	NA	100629041	100605834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
ENSMUST00000107366.2	chr4	+	3191	2	FSM	ENSMUSG00000051675.14	ENSMUST00000107366.2	3191	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTCATGTCTTAATT	NA	False	NA	20	True	AATAAA	-21	NA	65523222	65534475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_65523307_65531368
ENSMUST00000107369.2	chr3	-	1404	10	FSM	ENSMUSG00000027938.12	ENSMUST00000107369.2	1404	10	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_7	1.89215404065849	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCAAGTTTTTCACTATG	NA	False	NA	NA	False	AATAAA	-19	NA	90150450	90144876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90145229_90145356_90145454_90145618_90145704_90145789_90145859_90145951_90146059_90146190_90146287_90149238_90149361_90149517_90149753_90150028_90150144_90150324
ENSMUST00000107384.10	chr7	-	1745	11	FSM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	0	0	0	0	multi-exon	FALSE	canonical	3	1495	junction_5	201.26112391617	4317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765140	79744593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ENSMUST00000107389.8	chr11	-	4426	29	FSM	ENSMUSG00000020917.18	ENSMUST00000107389.8	4426	29	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_16	642.699119466695	2873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATGCTCTTTTATGTTC	NA	False	NA	-14	True	AATAAA	-18	NA	100418826	100367178	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ENSMUST00000107397.2	chr11	-	1348	8	FSM	ENSMUSG00000017176.18	ENSMUST00000107397.2	1348	8	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_1	42.2470866040561	1469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGGATGCACGCGTCTTT	NA	False	NA	-8	True	ATTAAA	-13	NA	100331754	100320184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654
ENSMUST00000107403.2	chr11	-	2386	13	FSM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_12	143.1885897068	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCCCCTTCCCCACTC	NA	False	NA	NA	False	NA	NA	NA	100288575	100263121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277212_100288446
ENSMUST00000107406.2	chr11	-	1062	5	FSM	ENSMUSG00000053654.8	ENSMUST00000107406.2	1062	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	11.3688170009021	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCATCATTTGTCCTGT	NA	False	NA	-6	True	AATAAA	-23	NA	100156804	100153707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425
ENSMUST00000107409.5	chr7	-	2008	9	FSM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	0	0	0	0	multi-exon	TRUE	canonical	3	790	junction_6	144.155948541848	3236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTGCCTCCTCATTG	NA	False	NA	-5	True	AATACA	-19	NA	78798801	78783515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78794994_78795127_78795369_78795493_78798642
ENSMUST00000107417.9	chr3	+	3079	13	FSM	ENSMUSG00000042626.14	ENSMUST00000107417.9	3079	13	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	89.6222008705928	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89325920	89337322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ENSMUST00000107421.8	chr7	+	2007	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	165.023903992388	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGGTCCTTTCTGG	NA	False	NA	NA	False	AATAAA	-18	NA	78545681	78558129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_78545763_78552091_78552579_78555590_78555792_78556891
ENSMUST00000107422.2	chr3	-	766	3	FSM	ENSMUSG00000028044.7	ENSMUST00000107422.2	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	1287.5	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTATTGGAAATTTTGC	NA	False	NA	23	True	NA	NA	NA	89325324	89322863	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89323271_89323580_89323709_89325093
ENSMUST00000107423.2	chr7	+	2230	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107423.2	2230	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	306.901721511409	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGAACTGGTCCTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	78545756	78558126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_78545950_78551977_78552579_78555590_78555792_78556891
ENSMUST00000107426.8	chr3	-	2238	8	FSM	ENSMUSG00000042642.14	ENSMUST00000107426.8	2238	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	99.0019583397321	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCTTCTGCTGAGCTGC	3738	False	NA	NA	False	AATAAA	-21	NA	89319176	89309973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319052
ENSMUST00000107444.8	chr4	-	1247	12	FSM	ENSMUSG00000028393.11	ENSMUST00000107444.8	1247	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	192.970301316246	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	False	NA	-1	True	AGTAAA	-18	NA	62438131	62427405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438031
ENSMUST00000107459.2	chr4	-	654	3	FSM	ENSMUSG00000066149.12	ENSMUST00000107459.2	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	175	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCTTAACTGATTTTTG	2681	False	NA	NA	False	NA	NA	NA	62326862	62312870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62313259_62320960_62321153_62326788
ENSMUST00000107491.11	chr3	-	1375	12	FSM	ENSMUSG00000068921.15	ENSMUST00000107491.11	1375	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	248.490151458566	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857258	88830941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_88831221_88832600_88832719_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ENSMUST00000107495.5	chr7	+	1003	6	FSM	ENSMUSG00000078681.11	ENSMUST00000107495.5	1003	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	226.65709783724	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAACTTTTTATTTGCCTG	NA	False	NA	28	True	AATAAA	-28	NA	65343164	65351661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_65343318_65343598_65343692_65344890_65345076_65347443_65347619_65348839_65348916_65351340
ENSMUST00000107526.8	chr4	-	1438	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	91.8416511659546	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTTTGTAAGGATCCT	30	True	NA	-6	True	ATTAAA	-18	NA	59783808	59771296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
ENSMUST00000107542.2	chr3	-	2051	6	FSM	ENSMUSG00000074489.10	ENSMUST00000107542.2	2051	6	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_5	10.571660229122	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGGGCTGGAGTCTG	7128	False	NA	NA	False	AATAAA	-13	NA	88280050	88275928	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276916_88277434_88278787_88279845
ENSMUST00000107553.8	chr3	-	2053	4	FSM	ENSMUSG00000001420.14	ENSMUST00000107553.8	2053	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.48528137423857	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGGCTCGTTCATT	NA	False	NA	NA	False	AATAAA	-11	NA	88241575	88236352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_88237240_88239746_88239961_88240198_88240990_88241414
ENSMUST00000107556.10	chr3	-	584	4	FSM	ENSMUSG00000010538.15	ENSMUST00000107556.10	584	4	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_3	20.138409955991	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACATGGGTCTGAGTCT	NA	False	NA	NA	False	CATAAA	-14	NA	88204306	88190063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_88190292_88194404_88194525_88202697_88202758_88204130
ENSMUST00000107574.8	chr4	-	3437	4	FSM	ENSMUSG00000038668.15	ENSMUST00000107574.8	3437	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	128.608795275526	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	130	False	NA	-5	True	AATAAA	-22	NA	58553628	58435254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553479
ENSMUST00000107575.9	chr4	-	3421	4	FSM	ENSMUSG00000038668.15	ENSMUST00000107575.9	3421	4	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_3	114.601725796585	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	205	False	NA	-5	True	AATAAA	-22	NA	58553553	58435254	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553420
ENSMUST00000107576.2	chr11	-	624	3	FSM	ENSMUSG00000018543.9	ENSMUST00000107576.2	624	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTGCTCATTCTTT	NA	False	NA	NA	False	TTTAAA	-16	NA	97666744	97662306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97662564_97663541_97663642_97666477
ENSMUST00000107583.3	chr11	+	737	3	FSM	ENSMUSG00000078695.9	ENSMUST00000107583.3	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	940	junction_1	75.5	5487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGTTTCTGTGGTCAC	2452	False	NA	-1	True	AATAAA	-21	NA	97576778	97579447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_97577042_97577326_97577447_97579093
ENSMUST00000107584.8	chr11	+	546	4	FSM	ENSMUSG00000078695.9	ENSMUST00000107584.8	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	467.239410438232	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGTTTCTGTGGTCAC	2325	False	NA	-1	True	AATAAA	-21	NA	97576651	97579447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_97576691_97577008_97577042_97577326_97577447_97579093
ENSMUST00000107619.3	chr4	-	3029	5	FSM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	0	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_2	61.7267162580353	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAATCTCTTTGTTTTTT	9	True	NA	-7	True	AATAAA	-21	NA	55532466	55527142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866
ENSMUST00000107624.8	chr11	-	3055	7	FSM	ENSMUSG00000018678.14	ENSMUST00000107624.8	3055	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	154.880599172395	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTCTGCGTTTGGCAGT	NA	False	NA	-17	True	AATAAA	-16	NA	96868537	96844166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854271_96868446
ENSMUST00000107658.8	chr11	-	4219	4	FSM	ENSMUSG00000038615.18	ENSMUST00000107658.8	4219	4	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_3	297.772844071898	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96718781	96708256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023
ENSMUST00000107661.10	chr11	-	2197	8	FSM	ENSMUSG00000020876.15	ENSMUST00000107661.10	2197	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	17.839419776416	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTGTTGCAATTTG	NA	False	NA	-16	True	AATAAA	-13	NA	96668385	96658702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667793_96667888_96668280
ENSMUST00000107675.8	chr3	+	3599	11	FSM	ENSMUSG00000028086.16	ENSMUST00000107675.8	3599	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.3971829588782	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCGCCTGTTTCTTCCAC	2998	False	NA	24	True	AATAAA	-18	NA	84832786	84886504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_84833107_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ENSMUST00000107684.2	chr11	-	596	5	FSM	ENSMUSG00000006057.16	ENSMUST00000107684.2	596	5	0	0	0	0	multi-exon	FALSE	canonical	3	5157	junction_4	2293.78611688187	32678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCATGTGCCTGTGCCT	3530	False	NA	-9	True	NA	NA	NA	95966445	95963815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966382
ENSMUST00000107686.8	chr11	-	691	5	FSM	ENSMUSG00000006057.16	ENSMUST00000107686.8	691	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	4410.8346149	22950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGCCTGTGCCTGTC	3568	False	NA	-6	True	NA	NA	NA	95966407	95963812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966252
ENSMUST00000107696.2	chr4	+	2965	3	FSM	ENSMUSG00000039634.13	ENSMUST00000107696.2	2965	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	6.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAAAAAATGACCT	-39	True	NA	NA	False	AAGAAA	-35	NA	49521216	49531517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_49521596_49522397_49522483_49529016
ENSMUST00000107700.4	chr11	+	849	7	FSM	ENSMUSG00000006058.11	ENSMUST00000107700.4	849	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	239.545866635645	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTTCCCCCAGTAT	3277	False	NA	21	True	AATAAA	-43	NA	95925790	95938256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95938020
ENSMUST00000107704.2	chr4	+	1597	3	FSM	ENSMUSG00000039693.12	ENSMUST00000107704.2	1597	3	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	75.5	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTACACTGTGTATGTT	38	True	NA	15	True	NA	NA	NA	48540498	48561919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_48540569_48552379_48552831_48560843
ENSMUST00000107722.8	chr11	+	3063	10	FSM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_3	21.694853460364	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCTGTCATTGATGTA	NA	False	NA	NA	False	AATAAA	-20	NA	95304923	95384232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ENSMUST00000107723.9	chr7	-	1898	7	FSM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	34.207292919623	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTCCTCTGAGCTTCTT	8634	False	NA	-4	True	AATAAA	-31	NA	45480213	45474650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45479715_45479834_45480018
ENSMUST00000107724.9	chr11	+	2881	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	65.0422170593838	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCTGTCATTGATGTA	NA	False	NA	NA	False	AATAAA	-20	NA	95304905	95384232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ENSMUST00000107752.12	chr7	+	1400	9	FSM	ENSMUSG00000030825.20	ENSMUST00000107752.12	1400	9	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	205.455591308682	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGAGTGGTCGTGTCCT	NA	False	NA	10	True	NA	NA	NA	45204316	45216745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45204491_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ENSMUST00000107758.10	chr7	+	1597	10	FSM	ENSMUSG00000023467.19	ENSMUST00000107758.10	1597	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	26.8989880024427	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTCTGTGCGTTTGGA	6743	False	NA	17	True	AATAAA	-18	NA	45135787	45171806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45135908_45165662_45165801_45165939_45166111_45167203_45167392_45168009_45168331_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
ENSMUST00000107771.12	chr7	-	1834	15	FSM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	0	0	0	0	multi-exon	FALSE	canonical	3	1951	junction_14	206.139144605714	7004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGCTGTGTCCTCAG	9182	False	NA	-4	True	TATAAA	-15	NA	45084047	45071321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ENSMUST00000107772.8	chr4	-	3726	10	FSM	ENSMUSG00000035495.16	ENSMUST00000107772.8	3726	10	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_3	21.9291789378647	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGGGAAGAGTGCTCT	223	False	NA	-3	True	AATAAA	-25	NA	46138475	46114745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
ENSMUST00000107802.8	chr3	-	2939	3	FSM	ENSMUSG00000034317.15	ENSMUST00000107802.8	2939	3	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_2	117	438	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGACATAGTTTTCTTA	NA	False	NA	-6	True	AATAAA	-26	NA	68952088	68942620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_68945342_68951100_68951176_68951945
ENSMUST00000107808.3	chr4	-	679	3	FSM	ENSMUSG00000078713.9	ENSMUST00000107808.3	679	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	2	9000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCGTGGTTTTGTGTTTT	-10	True	NA	NA	False	AATAAA	-14	NA	45108108	45105211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_45105645_45106838_45106889_45107912
ENSMUST00000107809.9	chr4	-	738	3	FSM	ENSMUSG00000078713.9	ENSMUST00000107809.9	738	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	3	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCGTGGTTTTGTGTTTT	60	False	NA	NA	False	AATAAA	-14	NA	45108038	45105211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_45105645_45106614_45106794_45107912
ENSMUST00000107810.3	chr4	-	639	2	FSM	ENSMUSG00000078713.9	ENSMUST00000107810.3	639	2	0	0	0	0	multi-exon	FALSE	canonical	3	2176	junction_1	0	9042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTTTTGTGTTTTTAAT	-16	True	NA	NA	False	AATAAA	-18	NA	45108114	45105207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_45105645_45107912
ENSMUST00000107811.4	chr7	+	1072	10	FSM	ENSMUSG00000003423.16	ENSMUST00000107811.4	1072	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	115.619106456406	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	21	True	AATAAA	-21	NA	44805366	44809489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44805480_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ENSMUST00000107812.8	chr3	-	4063	20	FSM	ENSMUSG00000027778.16	ENSMUST00000107812.8	4063	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	8.68500793787124	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCTGTTTGTGTTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	68911876	68799831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_68801515_68805817_68805942_68821944_68822118_68822226_68822317_68823424_68823597_68825289_68825438_68825822_68825959_68835059_68835125_68838154_68838319_68843179_68843255_68847418_68847538_68857686_68857867_68869512_68869651_68870955_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074_68898297_68901833_68901916_68911764
ENSMUST00000107820.2	chr11	-	3478	10	FSM	ENSMUSG00000020863.16	ENSMUST00000107820.2	3478	10	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_9	26.1850018328748	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGATTGTCTGTGTCAT	NA	False	NA	-5	True	AATAAA	-23	NA	94212814	94181964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ENSMUST00000107821.9	chr11	-	2050	11	FSM	ENSMUSG00000020863.16	ENSMUST00000107821.9	2050	11	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	26.33172990899	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATATGAGGCATACTAG	NA	False	NA	73	True	AATAAA	-27	NA	94212814	94181886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ENSMUST00000107829.9	chr7	+	972	9	FSM	ENSMUSG00000003421.14	ENSMUST00000107829.9	972	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	164.802912595621	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCCTGGCGCCTCATTG	3058	False	NA	27	True	AATAAA	-18	NA	44711852	44726840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44726050_44726164_44726244_44726354_44726735
ENSMUST00000107843.11	chr7	-	1508	11	FSM	ENSMUSG00000109324.3	ENSMUST00000107843.11	1508	11	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_9	1333.46760365597	4426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635992	44626181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633503_44633558_44635706
ENSMUST00000107845.4	chr4	+	1031	5	FSM	ENSMUSG00000028478.19	ENSMUST00000107845.4	1031	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	565.255860208455	2222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	8	True	NA	21	True	AATAAA	-21	NA	44012685	44032846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_44013003_44018812_44018851_44019873_44019992_44025448_44025561_44032400
ENSMUST00000107849.10	chr4	+	1099	6	FSM	ENSMUSG00000028478.19	ENSMUST00000107849.10	1099	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	631.636794368409	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	0	True	NA	21	True	AATAAA	-21	NA	44012677	44032846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44030214_44030269_44032400
ENSMUST00000107855.2	chr4	+	1816	3	FSM	ENSMUSG00000028480.15	ENSMUST00000107855.2	1816	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	114.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCCTCTAATGCGATT	-15	True	NA	36	True	AATAAA	-21	NA	43957691	43979118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_43957774_43970499_43970578_43977462
ENSMUST00000107876.8	chr7	+	1770	17	FSM	ENSMUSG00000002963.18	ENSMUST00000107876.8	1770	17	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	53.8118466859297	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9315	False	NA	15	True	AATAAA	-17	NA	44506562	44512074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44506727_44506818_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUST00000107896.10	chr11	+	5590	9	FSM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	154.213123630902	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACATTGTCCTGCCTTTTG	NA	False	NA	24	True	NA	NA	NA	88890201	88911119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020
ENSMUST00000107903.8	chr11	-	3721	11	FSM	ENSMUSG00000018428.16	ENSMUST00000107903.8	3721	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	272.1683302664	1617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGAGTCCATTTTTTCTT	NA	False	NA	92	True	TATAAA	-7	NA	88742329	88721617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88742176
ENSMUST00000107904.3	chr11	-	2673	11	FSM	ENSMUSG00000018428.16	ENSMUST00000107904.3	2673	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	272.1683302664	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCCTGAGTTGCTT	NA	False	NA	NA	False	NA	NA	NA	88754543	88722580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88754475
ENSMUST00000107910.8	chr7	-	1948	10	FSM	ENSMUSG00000060601.14	ENSMUST00000107910.8	1948	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	233.829683717988	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTGAGTACAAGCCAT	NA	False	NA	-19	True	AATAAA	-12	NA	44203347	44199058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202182_44203002_44203133_44203232
ENSMUST00000107911.8	chr7	-	1988	10	FSM	ENSMUSG00000060601.14	ENSMUST00000107911.8	1988	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	219.110209599227	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGAGCCCAGTGTGGA	NA	False	NA	-1	True	AATAAA	-30	NA	44203372	44199040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202179_44203002_44203133_44203232
ENSMUST00000107914.10	chr4	-	1164	9	FSM	ENSMUSG00000028464.17	ENSMUST00000107914.10	1164	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2.31503239718152	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGCCCTTTAAGCCT	9769	False	NA	-14	True	AATAAA	-16	NA	43523595	43514710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_43514862_43518229_43518300_43518401_43518465_43519002_43519079_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
ENSMUST00000107922.3	chr4	+	865	5	FSM	ENSMUSG00000028461.13	ENSMUST00000107922.3	865	5	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_4	11.5433963806152	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	1	True	NA	14	True	AGTAAA	-45	NA	43493388	43495921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508
ENSMUST00000107924.3	chr3	+	3157	6	FSM	ENSMUSG00000075700.11	ENSMUST00000107924.3	3157	6	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	12.1061967603372	1217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGCTTTGTGAAAATG	NA	False	NA	15	True	AATAAA	-18	NA	58484056	58500554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_58484295_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115
ENSMUST00000107948.8	chr7	+	2908	6	FSM	ENSMUSG00000045411.17	ENSMUST00000107948.8	2908	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	279.671664635515	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTAGGGTGTGCTGTTTG	NA	False	NA	18	True	ATTAAA	-18	NA	43896214	43901737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43896248_43896674_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000107949.8	chr7	+	3610	4	FSM	ENSMUSG00000045411.17	ENSMUST00000107949.8	3610	4	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_3	48.6095555306659	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	43896210	43901736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43897720_43898965_43899024_43899444_43899484_43899732
ENSMUST00000107950.9	chr7	+	3336	5	FSM	ENSMUSG00000045411.17	ENSMUST00000107950.9	3336	5	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_3	44.6933999601731	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	43896212	43901736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000107971.9	chr3	+	3567	8	FSM	ENSMUSG00000036580.16	ENSMUST00000107971.9	3567	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	57.8710741604975	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTGGGCCTCAGATGT	NA	False	NA	10	True	AATAAA	-11	NA	55019549	55044732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUST00000107986.9	chr7	-	4184	5	FSM	ENSMUSG00000012640.17	ENSMUST00000107986.9	4184	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	14.2894191624432	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	0	True	AATAAA	-16	NA	42962679	42945946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960610_42962527
ENSMUST00000107992.2	chr7	-	3148	4	FSM	ENSMUSG00000069727.6	ENSMUST00000107992.2	3148	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	55.1784982277215	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCGTGTCCTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	42342142	42309528	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_42312421_42314181_42314243_42314441_42314569_42342074
ENSMUST00000107994.3	chr7	-	4868	3	FSM	ENSMUSG00000074158.10	ENSMUST00000107994.3	4868	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.5	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATAATCTCTTCT	NA	False	NA	-23	True	NA	NA	NA	42292012	42258949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_42263648_42265396_42265458_42291903
ENSMUST00000108022.8	chr11	+	3038	2	FSM	ENSMUSG00000072582.10	ENSMUST00000108022.8	3038	2	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	0	1838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTGGTGTCTGATTCAT	NA	False	NA	NA	False	NA	NA	NA	86574810	86583283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_86574950_86580384
ENSMUST00000108032.3	chr4	-	350	4	FSM	ENSMUSG00000073888.14	ENSMUST00000108032.3	350	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	26.6124448749494	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACTGCCTCCCTGACTT	12	False	NA	NA	False	ATTAAA	-14	NA	41774158	41773187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41773351_41773464_41773525_41773735_41773804_41774099
ENSMUST00000108035.8	chr4	-	731	3	FSM	ENSMUSG00000073888.14	ENSMUST00000108035.8	731	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	9.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTCTCTTTTATTTCA	2623	False	NA	5	True	AATAAA	-28	NA	41771547	41769466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41769655_41769843_41769977_41771137
ENSMUST00000108037.9	chr4	-	590	6	FSM	ENSMUSG00000073888.14	ENSMUST00000108037.9	590	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	16.7020956768904	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTCTCTTTTATTTCA	28	False	NA	5	True	AATAAA	-28	NA	41774142	41769466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41769655_41769843_41769977_41771137_41771236_41773464_41773525_41773735_41773804_41774099
ENSMUST00000108051.8	chr3	-	2514	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108051.8	2514	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	34.1987654098149	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTACCTAGCACAGTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	51184935	51163085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51184625
ENSMUST00000108053.9	chr3	-	2611	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108053.9	2611	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	57.3626378596925	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTACCTAGCACAGTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	51184996	51163085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51184625
ENSMUST00000108061.8	chr11	+	3810	28	FSM	ENSMUSG00000059439.16	ENSMUST00000108061.8	3810	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	44.8979944315785	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTTGCTGGGGTCA	3478	False	NA	14	True	AATAAA	-22	NA	85243992	85716884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_85244060_85245419_85245506_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85434753_85434799_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85704825_85704892_85712847_85712939_85716027
ENSMUST00000108062.8	chr11	+	3724	27	FSM	ENSMUSG00000059439.16	ENSMUST00000108062.8	3724	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	39.938340049596	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTTGCTGGGGTCA	3478	False	NA	14	True	AATAAA	-22	NA	85243992	85716884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85434753_85434799_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85704825_85704892_85712847_85712939_85716027
ENSMUST00000108065.9	chr3	+	3452	6	FSM	ENSMUSG00000025766.15	ENSMUST00000108065.9	3452	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	11.0199818511647	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCATATTTTGTGC	NA	False	NA	3	True	ATTAAA	-13	NA	41697048	41713365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_41697125_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
ENSMUST00000108068.8	chr4	-	4380	29	FSM	ENSMUSG00000028433.15	ENSMUST00000108068.8	4380	29	0	0	0	0	multi-exon	TRUE	canonical	3	748	junction_17	84.4073804080362	1622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	209	False	NA	-3	True	AATAAA	-15	NA	41275144	41194312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ENSMUST00000108074.8	chr7	-	6224	14	FSM	ENSMUSG00000066571.14	ENSMUST00000108074.8	6224	14	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_13	29.0706138861218	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTATCTTTTTTAAATT	9808	False	NA	NA	False	ATTAAA	-18	NA	34012976	33936131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012911
ENSMUST00000108081.9	chr11	-	3034	14	FSM	ENSMUSG00000020530.15	ENSMUST00000108081.9	3034	14	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_13	134.623999724325	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTCTTCCTTCCTCA	NA	False	NA	0	True	AATAAA	-16	NA	84761615	84723186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ENSMUST00000108108.3	chr4	-	480	3	FSM	ENSMUSG00000071014.11	ENSMUST00000108108.3	480	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1267.5	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCACTGTCCGTGTTACT	2	True	NA	-11	True	AATAAA	-17	NA	40279409	40270664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_40270848_40272809_40272855_40279157
ENSMUST00000108127.4	chr4	-	3193	11	FSM	ENSMUSG00000028300.15	ENSMUST00000108127.4	3193	11	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_8	10.8355895086516	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGTTTTAGTTCATT	NA	False	NA	-5	True	AATAAA	-16	NA	35225880	35191286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225787
ENSMUST00000108131.8	chr4	-	892	4	FSM	ENSMUSG00000028295.15	ENSMUST00000108131.8	892	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	75.9780670105963	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGAGTTTTTCTTTT	2	True	NA	NA	False	AATAAA	-6	NA	34778349	34768663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_34769148_34771257_34771415_34771873_34772054_34778278
ENSMUST00000108134.8	chr4	-	782	3	FSM	ENSMUSG00000028295.15	ENSMUST00000108134.8	782	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	76	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGAGTTTTTCTTTT	-13	True	NA	NA	False	AATAAA	-6	NA	34778364	34768663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_34769148_34771257_34771415_34778223
ENSMUST00000108142.8	chr4	-	2266	20	FSM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_6	92.190426792828	1889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	-5	True	NA	-17	True	CATAAA	-21	NA	34614913	34570795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ENSMUST00000108146.8	chr11	-	2389	4	FSM	ENSMUSG00000018733.11	ENSMUST00000108146.8	2389	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	16.4991582276861	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGACTTCTTGAAGTTT	2426	False	NA	-7	True	AATAAA	-16	NA	83189768	83185900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189537
ENSMUST00000108151.3	chr7	-	1775	6	FSM	ENSMUSG00000006310.11	ENSMUST00000108151.3	1775	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	31.6771210813104	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30292367	30289105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30290481_30291391_30292336
ENSMUST00000108153.9	chr4	+	4157	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	0	0	0	0	multi-exon	TRUE	canonical	3	214	junction_12	34.6965256025569	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTTCCTGTCTCG	-36	True	NA	11	True	AATAAA	-18	NA	33310310	33502614	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ENSMUST00000108156.9	chr3	-	2687	19	FSM	ENSMUSG00000037325.11	ENSMUST00000108156.9	2687	19	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_12	6.84754619472471	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTCTTTATATATT	NA	False	NA	NA	False	ATTAAA	-21	NA	36667626	36627290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_36627772_36629442_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648710_36652414_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328_36664505_36664714_36664778_36666160_36666227_36667398
ENSMUST00000108193.2	chr7	+	488	6	FSM	ENSMUSG00000019738.16	ENSMUST00000108193.2	488	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	479.289724488226	1845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTAGTGTTTCCCGTGTTT	NA	False	NA	13	True	AATAAA	-13	NA	29931756	29932810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_29931830_29931906_29931962_29932116_29932249_29932331_29932407_29932491_29932544_29932709
ENSMUST00000108195.10	chr3	-	659	6	FSM	ENSMUSG00000027679.14	ENSMUST00000108195.10	659	6	0	0	0	0	multi-exon	FALSE	canonical	3	3089	junction_3	262.703330774469	13365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTCATTGCTGACTTA	NA	False	NA	71	True	TATAAA	-1	NA	34135470	34131427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135334
ENSMUST00000108196.8	chr7	-	1192	10	FSM	ENSMUSG00000001794.14	ENSMUST00000108196.8	1192	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_9	490.288577155219	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGACTCTGAGTGCTGA	NA	False	NA	-28	True	AATAAA	-21	NA	29892531	29886414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29892454
ENSMUST00000108200.2	chr7	+	3604	3	FSM	ENSMUSG00000049421.14	ENSMUST00000108200.2	3604	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	44	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGATCCTTTGTTGTT	NA	False	NA	5	True	NA	NA	NA	29794609	29807039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_29794637_29798952_29799148_29803657
ENSMUST00000108222.9	chr4	+	4478	24	FSM	ENSMUSG00000045751.17	ENSMUST00000108222.9	4478	24	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_15	74.8650203134992	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-16	True	NA	NA	False	ATTAAA	-23	NA	24496450	24602950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ENSMUST00000108237.2	chr7	+	1086	7	FSM	ENSMUSG00000030588.13	ENSMUST00000108237.2	1086	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	686.982471877316	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGGGGGGCCTTCTTCT	6160	False	NA	24	True	NA	NA	NA	28937876	28947018	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28938037_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945325_28945420_28946661
ENSMUST00000108238.8	chr7	+	1126	8	FSM	ENSMUSG00000030588.13	ENSMUST00000108238.8	1126	8	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_1	273.775194535329	3951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6037	False	NA	12	True	AATAAA	-15	NA	28937753	28946954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUST00000108240.3	chr4	+	1406	12	FSM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_11	64.4238290701982	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGTTTTCTGGATTTT	-5	True	NA	12	True	AATAAA	-14	NA	21727754	21747962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
ENSMUST00000108259.8	chr3	+	1916	3	FSM	ENSMUSG00000037661.15	ENSMUST00000108259.8	1916	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	143	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910098	30951339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_30910207_30931383_30931711_30949858
ENSMUST00000108261.8	chr3	+	2213	4	FSM	ENSMUSG00000037661.15	ENSMUST00000108261.8	2213	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	104.473282070904	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910098	30951339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_30910404_30931383_30931711_30944090_30944191_30949858
ENSMUST00000108265.3	chr3	+	2092	6	FSM	ENSMUSG00000027703.17	ENSMUST00000108265.3	2092	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	18.0177690072883	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGAATTAATGAAAATAA	NA	False	NA	NA	False	AATAAA	-13	NA	30702034	30726448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_30702410_30704053_30705102_30709785_30709960_30713202_30713342_30714049_30714247_30726289
ENSMUST00000108278.9	chr7	+	1806	8	FSM	ENSMUSG00000030598.16	ENSMUST00000108278.9	1806	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	33.4310133418242	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28416256	28437563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763_28436972_28437089
ENSMUST00000108279.9	chr7	+	1563	7	FSM	ENSMUSG00000030598.16	ENSMUST00000108279.9	1563	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	37.5340586075574	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	28416297	28437569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28437089
ENSMUST00000108283.8	chr7	-	2899	10	FSM	ENSMUSG00000030602.14	ENSMUST00000108283.8	2899	10	0	0	0	0	multi-exon	TRUE	canonical	3	622	junction_9	35.4843036069349	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGGT	4596	False	NA	-3	True	ATTAAA	-21	NA	28297610	28258243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28297459
ENSMUST00000108292.9	chr7	+	657	7	FSM	ENSMUSG00000060791.16	ENSMUST00000108292.9	657	7	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	45.6070170039655	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACATGGTATCTGCAAAAT	1815	False	NA	NA	False	AATAAA	-26	NA	28136871	28145971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28137000_28140858_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796
ENSMUST00000108319.9	chr4	-	3220	27	FSM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	0	0	0	0	multi-exon	TRUE	canonical	3	373	junction_22	31.9212464720813	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTACAATTTAGTGGT	-1	True	NA	-14	True	ATTAAA	-20	NA	11254258	11204382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ENSMUST00000108322.9	chr11	+	1685	10	FSM	ENSMUSG00000002059.19	ENSMUST00000108322.9	1685	10	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	10.0443461155462	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTTTCTTTAAAG	6374	False	NA	21	True	ATTAAA	-15	NA	78079604	78083014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
ENSMUST00000108324.4	chr4	+	2908	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	27.8285779741998	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAAAAAAATGGCATCAC	309	False	NA	NA	False	NA	NA	NA	11191729	11204682	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ENSMUST00000108338.2	chr11	+	714	3	FSM	ENSMUSG00000019437.18	ENSMUST00000108338.2	714	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGTTCCTCAGCTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	78069587	78070701	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78069883_78070195_78070279_78070365
ENSMUST00000108358.8	chr7	+	951	4	FSM	ENSMUSG00000040466.17	ENSMUST00000108358.8	951	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	187.642094306037	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGTGATTATTTTGGT	NA	False	NA	60	True	NA	NA	NA	27147456	27165423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27147622_27158680_27159059_27161991_27162121_27165144
ENSMUST00000108365.4	chr3	-	559	4	FSM	ENSMUSG00000078784.9	ENSMUST00000108365.4	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	2488.45909483493	7863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTCTTTAAATCTTG	NA	False	NA	-5	True	AATAAA	-18	NA	14676281	14671348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_14671469_14672236_14672354_14674600_14674718_14676076
ENSMUST00000108370.9	chr3	+	3359	19	FSM	ENSMUSG00000027550.15	ENSMUST00000108370.9	3359	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_18	19.4050394371038	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGTTTTCTCTCTGAAA	NA	False	NA	NA	False	AATAAA	-27	NA	14598847	14637718	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14637463
ENSMUST00000108378.10	chr7	+	2276	14	FSM	ENSMUSG00000003762.14	ENSMUST00000108378.10	2276	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	13.8260537867321	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCAGTTCTTTTCTCTCT	NA	False	NA	16	True	AATAAA	-16	NA	26932637	26957369	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ENSMUST00000108382.2	chr7	-	1756	6	FSM	ENSMUSG00000058709.12	ENSMUST00000108382.2	1756	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	218.816452763498	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGGTTTTGACCTGGG	NA	False	NA	NA	False	NA	NA	NA	26865838	26858412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26865740
ENSMUST00000108386.8	chr4	+	524	5	FSM	ENSMUSG00000042198.13	ENSMUST00000108386.8	524	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	133.401649165218	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTTTTGGGGTTTTT	NA	False	NA	25	True	ATTAAA	-18	NA	3938887	3943523	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_3938963_3939378_3939527_3941245_3941312_3942720_3942820_3943387
ENSMUST00000108429.8	chr7	+	633	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108429.8	633	6	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	10447.7852504729	139782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584138	24589231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_24584295_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ENSMUST00000108430.10	chr7	+	774	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108430.10	774	6	0	0	0	0	multi-exon	FALSE	canonical	3	8873	junction_5	7497.54368843557	195442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24583795	24589231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ENSMUST00000108431.3	chr11	+	4718	32	FSM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	44.4739631998939	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	NA	False	NA	13	True	AATAAA	-17	NA	75546698	75564734	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ENSMUST00000108433.8	chr11	+	3236	14	FSM	ENSMUSG00000038178.17	ENSMUST00000108433.8	3236	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	9.5805522935017	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGACATAGTGGCACACA	6875	False	NA	121	True	AAAAAG	-3	NA	75422523	75464709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_75422605_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ENSMUST00000108450.5	chr7	-	1955	6	FSM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_1	167.41517255016	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGGGTGTTTTGTAATC	NA	False	NA	-4	True	AATAAA	-16	NA	19483458	19458085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ENSMUST00000108453.2	chr7	+	1530	3	FSM	ENSMUSG00000011267.9	ENSMUST00000108453.2	1530	3	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	5.5	2153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGACTTTCTTGGGGT	727	False	NA	26	True	AATAAA	-21	NA	19311211	19314581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_19311554_19311741_19311886_19313537
ENSMUST00000108455.8	chr7	+	651	6	FSM	ENSMUSG00000002043.18	ENSMUST00000108455.8	651	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	201.035917188944	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACCTGTGCAGTGCTTAT	521	False	NA	17	True	AGTAAA	-18	NA	19242650	19250066	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_19242758_19248125_19248194_19248346_19248465_19248931_19249016_19249128_19249223_19249886
ENSMUST00000108476.8	chr11	-	2723	12	FSM	ENSMUSG00000005949.10	ENSMUST00000108476.8	2723	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	20.3534877308514	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCGGAACGTTTACTAG	4465	False	NA	-1	True	ATTAAA	-23	NA	73089868	73074422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73087924_73088079_73089743
ENSMUST00000108496.9	chr7	+	2764	9	FSM	ENSMUSG00000001918.18	ENSMUST00000108496.9	2764	9	0	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_5	112.684293492927	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTTGTCACATGTCT	NA	False	NA	73	True	NA	NA	NA	16515264	16532199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ENSMUST00000108503.9	chr11	-	1397	8	FSM	ENSMUSG00000020799.17	ENSMUST00000108503.9	1397	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	18.5681315754731	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAGCACAGAGCTCTCA	NA	False	NA	-1	True	ATTAAA	-17	NA	72252699	72235547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_72235798_72236411_72236609_72242653_72242877_72245524_72245669_72246035_72246165_72248310_72248477_72250504_72250712_72252618
ENSMUST00000108513.5	chr7	-	1344	3	FSM	ENSMUSG00000041583.9	ENSMUST00000108513.5	1344	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	9.5	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCAGTTTTTACCCCC	NA	False	NA	20	True	AATAAA	-36	NA	15573603	15567165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_15567876_15568304_15568891_15573555
ENSMUST00000108530.2	chr11	-	2389	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108530.2	2389	17	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_6	121.230008016786	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGAATAAATTTTTATTC	NA	False	NA	-29	True	AATAAA	-19	NA	70860780	70833927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUST00000108531.8	chr11	-	2453	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108531.8	2453	17	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_6	132.716744893024	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCTTTACAATTAAAGT	NA	False	NA	1	True	AATAAA	-31	NA	70860799	70833897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUST00000108539.8	chr7	+	794	6	FSM	ENSMUSG00000012848.16	ENSMUST00000108539.8	794	6	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_1	6466.78878578851	109812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCCTGTGTGCTTGTCT	NA	False	NA	37	True	AATAAA	-23	NA	12656216	12660612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_12656350_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ENSMUST00000108568.10	chr11	+	1777	15	FSM	ENSMUSG00000060216.16	ENSMUST00000108568.10	1777	15	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_13	60.0347263452324	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323462	70331500	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
ENSMUST00000108575.9	chr11	-	643	4	FSM	ENSMUSG00000020831.19	ENSMUST00000108575.9	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	223.35671519393	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	-12	True	ATTAAA	-15	NA	70128679	70126031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70126295_70126822_70127038_70128356_70128452_70128609
ENSMUST00000108578.9	chr11	-	880	6	FSM	ENSMUSG00000020831.19	ENSMUST00000108578.9	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	133.830340356737	2198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	-12	True	ATTAAA	-15	NA	70128740	70126031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70126291_70126521_70126627_70126849_70127038_70127702_70127805_70128356_70128452_70128609
ENSMUST00000108579.8	chr11	-	667	4	FSM	ENSMUSG00000020831.19	ENSMUST00000108579.8	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	177.768263634304	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	-12	True	ATTAAA	-15	NA	70128730	70126031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70126295_70126849_70127038_70128356_70128452_70128609
ENSMUST00000108582.10	chr7	+	2774	9	FSM	ENSMUSG00000059851.16	ENSMUST00000108582.10	2774	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	203.174647778703	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	635	False	NA	16	True	ATTAAA	-17	NA	4743165	4750513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_4743818_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ENSMUST00000108583.9	chr7	+	2177	9	FSM	ENSMUSG00000059851.16	ENSMUST00000108583.9	2177	9	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_1	88.3026578025826	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	653	False	NA	16	True	ATTAAA	-17	NA	4743183	4750513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ENSMUST00000108594.8	chr11	-	1454	9	FSM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	188.652085530481	2380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAATGCTTAAACA	8900	False	NA	0	True	AATAAA	-30	NA	69872078	69859049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039_69871389_69872032
ENSMUST00000108607.8	chr11	-	852	7	FSM	ENSMUSG00000078812.11	ENSMUST00000108607.8	852	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	9783.67234080446	1800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAGTTGGGTACTGCTTG	6467	False	NA	NA	False	NA	NA	NA	69812016	69807922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166_69811249_69811988
ENSMUST00000108610.8	chr11	-	1409	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108610.8	1409	6	0	0	0	0	multi-exon	FALSE	canonical	3	855	junction_5	8144.23656336185	4475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	7027	False	NA	-15	True	AATAAA	-20	NA	69811456	69807545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166
ENSMUST00000108611.8	chr11	-	1353	7	FSM	ENSMUSG00000078812.11	ENSMUST00000108611.8	1353	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	9790.70116658319	4432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	6717	False	NA	-15	True	AATAAA	-20	NA	69811766	69807545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166_69811261_69811626
ENSMUST00000108612.8	chr11	-	1259	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108612.8	1259	6	0	0	0	0	multi-exon	FALSE	canonical	3	1359	junction_5	7943.03597876782	3708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	6717	False	NA	-15	True	AATAAA	-20	NA	69811766	69807545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811626
ENSMUST00000108613.10	chr11	-	1343	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	0	0	0	0	multi-exon	FALSE	canonical	3	20384	junction_3	507.007534460781	31459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	9941	False	NA	-15	True	AATAAA	-20	NA	69812212	69807545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ENSMUST00000108623.8	chr7	+	1347	5	FSM	ENSMUSG00000006333.15	ENSMUST00000108623.8	1347	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_4	5925.24712564801	5182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTATTGGTGTGCCTCTG	1309	False	NA	1	True	AATAAA	-16	NA	3707036	3709894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709006
ENSMUST00000108624.8	chr7	+	478	3	FSM	ENSMUSG00000006333.15	ENSMUST00000108624.8	478	3	0	0	0	0	multi-exon	FALSE	canonical	1	174	junction_2	7056	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGAATTGATACTTG	1591	False	NA	-18	True	NA	NA	NA	3707318	3709875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3707448_3707644_3707768_3709649
ENSMUST00000108625.8	chr7	+	914	4	FSM	ENSMUSG00000006333.15	ENSMUST00000108625.8	914	4	0	0	0	0	multi-exon	FALSE	canonical	3	14286	junction_1	337.374503416538	72369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTTTCCAGCTGAAAAAT	1323	False	NA	-37	True	NA	NA	NA	3707050	3709856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3707448_3707644_3707768_3708731_3708919_3709649
ENSMUST00000108627.4	chr7	+	1319	4	FSM	ENSMUSG00000035585.17	ENSMUST00000108627.4	1319	4	0	0	0	0	multi-exon	FALSE	canonical	3	1035	junction_3	83.107694522763	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2933	False	NA	-2	True	AATAAA	-8	NA	3697521	3704003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3697844_3697976_3698227_3698350_3698621_3703526
ENSMUST00000108636.2	chr7	+	1798	13	FSM	ENSMUSG00000008373.17	ENSMUST00000108636.2	1798	13	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_8	240.724759262985	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGGTGTGAGTGATTAT	3505	False	NA	14	True	ATTAAA	-22	NA	3633555	3644228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641647_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ENSMUST00000108641.10	chr7	-	1166	6	FSM	ENSMUSG00000006335.17	ENSMUST00000108641.10	1166	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	47.3142684610044	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	-1	True	AATAAA	-16	NA	3632928	3623322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_3623474_3623745_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
ENSMUST00000108657.4	chr11	+	1822	11	FSM	ENSMUSG00000059552.14	ENSMUST00000108657.4	1822	11	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_10	535.886405873484	4257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471230	69482699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
ENSMUST00000108666.8	chr11	+	1831	9	FSM	ENSMUSG00000020897.13	ENSMUST00000108666.8	1831	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	202.492592457107	1522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGTGGTCTGAATAT	NA	False	NA	16	True	AATAAA	-26	NA	68936472	68942490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_68936637_68936760_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ENSMUST00000108675.2	chr11	+	1497	3	FSM	ENSMUSG00000020903.14	ENSMUST00000108675.2	1497	3	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	29.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATGGGGGCCTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	67857305	67865417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_67857344_67860597_67860698_67864058
ENSMUST00000108697.8	chr11	+	2612	24	FSM	ENSMUSG00000020549.15	ENSMUST00000108697.8	2612	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	73.6751414320214	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTCAGCCTGCAGTA	NA	False	NA	NA	False	NA	NA	NA	64869896	64892154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883267_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ENSMUST00000108713.8	chr11	-	4207	9	FSM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_6	30.1330383466387	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470511	61408074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ENSMUST00000108714.2	chr11	-	3069	7	FSM	ENSMUSG00000001034.18	ENSMUST00000108714.2	3069	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	75.7840499196382	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTCATTTTTGGGGT	NA	False	NA	1	True	AATACA	-19	NA	61385122	61379637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384422_61384781_61384905
ENSMUST00000108719.4	chr11	+	4268	21	FSM	ENSMUSG00000020536.13	ENSMUST00000108719.4	4268	21	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_6	33.7192452465947	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGCACACATGTGGACA	NA	False	NA	39	True	AATAAA	-24	NA	60590670	60605012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ENSMUST00000108721.9	chr11	-	1813	8	FSM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	36.2902134443535	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGGTCTAAGCAGTT	NA	False	NA	0	True	NA	NA	NA	60307877	60291451	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ENSMUST00000108723.9	chr11	+	1917	14	FSM	ENSMUSG00000056598.17	ENSMUST00000108723.9	1917	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	9.60892090438596	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGGTGTCAGTATTCTC	3421	False	NA	NA	False	AATATA	-22	NA	60244154	60285167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_60244259_60244927_60245027_60249443_60249643_60254289_60254407_60255691_60255859_60261294_60261442_60265903_60266024_60266619_60266733_60268635_60268811_60275039_60275172_60278118_60278190_60279638_60279763_60284522_60284655_60284950
ENSMUST00000108754.8	chr2	+	3499	7	FSM	ENSMUSG00000027589.15	ENSMUST00000108754.8	3499	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	27.4028587316482	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATTCTCAGTATTGCT	NA	False	NA	11	True	AATAAA	-14	NA	181479705	181499239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493374_181493503_181496730
ENSMUST00000108769.8	chr2	-	1460	5	FSM	ENSMUSG00000002458.14	ENSMUST00000108769.8	1460	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_4	23.2849200127464	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAAGCTGTTGTTATGGT	NA	False	NA	-3	True	AGTAAA	-10	NA	181335723	181330299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
ENSMUST00000108779.8	chr2	-	642	5	FSM	ENSMUSG00000002458.14	ENSMUST00000108779.8	642	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	54.9408773137088	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTGTTCTTTCAAGTT	NA	False	NA	-15	True	AATAAA	-14	NA	181335713	181330214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_181330512_181331494_181331570_181333025_181333148_181333282_181333389_181335671
ENSMUST00000108784.4	chr11	+	729	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108784.4	729	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	265.902655538117	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTCATTGTCTTCTT	NA	False	NA	9	True	NA	NA	NA	59093363	59096714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_59093546_59094997_59095082_59095360_59095584_59096474
ENSMUST00000108785.2	chr11	+	792	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108785.2	792	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	266.007936389541	2411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACTTTTGGGGTTGACT	NA	False	NA	12	True	ATTAAA	-26	NA	59093330	59096828	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_59093486_59095000_59095082_59095381_59095584_59096474
ENSMUST00000108787.9	chr11	+	718	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108787.9	718	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	235.799820940465	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTCATTGTCTTCTT	NA	False	NA	9	True	NA	NA	NA	59093314	59096714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_59093486_59094997_59095082_59095360_59095584_59096474
ENSMUST00000108799.10	chr2	+	985	9	FSM	ENSMUSG00000000827.19	ENSMUST00000108799.10	985	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	401.298965080898	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTGCCATCCTTTCAA	NA	False	NA	36	True	CATAAA	-33	NA	181139023	181157180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181152296_181152324_181153366_181153409_181154831_181154881_181156872
ENSMUST00000108807.9	chr2	+	2072	6	FSM	ENSMUSG00000027582.17	ENSMUST00000108807.9	2072	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	10.1074230147946	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTCTCTCAGTGGAGAC	NA	False	NA	5	True	ATTAAA	-12	NA	181007197	181022575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167
ENSMUST00000108809.8	chr11	+	3522	5	FSM	ENSMUSG00000020455.17	ENSMUST00000108809.8	3522	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	36.1481327318577	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTCTCTGCTTATCCT	1666	False	NA	12	True	AATAAA	-12	NA	58868918	58882281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_58869471_58872066_58872163_58872818_58873050_58879550_58879574_58879661
ENSMUST00000108813.10	chr15	-	3661	5	FSM	ENSMUSG00000009575.15	ENSMUST00000108813.10	3661	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	189.635176061827	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGAGGGCATTGAATCT	NA	False	NA	NA	False	NA	NA	NA	103123779	103105113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123694
ENSMUST00000108815.8	chr2	+	4243	33	FSM	ENSMUSG00000038685.19	ENSMUST00000108815.8	4243	33	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_30	41.94582396899	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961577	180998409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716
ENSMUST00000108830.2	chr8	+	3191	12	FSM	ENSMUSG00000001482.16	ENSMUST00000108830.2	3191	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	79.5842502795747	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAATGTTACTAGTCT	NA	False	NA	23	True	TATAAA	-12	NA	124170046	124190001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124170185_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ENSMUST00000108832.8	chr8	+	3242	14	FSM	ENSMUSG00000001482.16	ENSMUST00000108832.8	3242	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	108.849605816422	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169743	124190009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124169791_124172836_124172924_124174055_124174103_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ENSMUST00000108840.4	chr8	+	2582	18	FSM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_17	99.4416940675849	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAACATGGTGATAT	NA	False	NA	8	True	AAGAAA	-13	NA	124100561	124130545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
ENSMUST00000108841.2	chr2	+	689	5	FSM	ENSMUSG00000016344.15	ENSMUST00000108841.2	689	5	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	248.035279748668	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGTATGTTTGAAAC	3425	False	NA	1	True	AATAAA	-17	NA	180829128	180830297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180829248_180829457_180829530_180829601_180829680_180829796_180829894_180829974
ENSMUST00000108849.8	chr11	+	4827	3	FSM	ENSMUSG00000020522.14	ENSMUST00000108849.8	4827	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	35	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGAATGATGTATATTA	NA	False	NA	19	True	AATAAA	-20	NA	57409489	57424641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_57409539_57418684_57419116_57420294
ENSMUST00000108857.2	chr11	-	541	4	FSM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	0	0	0	0	multi-exon	FALSE	canonical	3	2715	junction_3	136.123310110927	17391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTCTGGTGTATGTT	NA	False	NA	-7	True	AATAAA	-20	NA	55352065	55337466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_55337611_55341282_55341452_55345706_55345783_55351913
ENSMUST00000108858.8	chr11	-	2115	10	FSM	ENSMUSG00000018593.14	ENSMUST00000108858.8	2115	10	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_8	195.999685058956	2058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3858	False	NA	-2	True	AATAAA	-22	NA	55310724	55285325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298103_55300753_55300824_55310613
ENSMUST00000108875.2	chr2	+	1178	7	FSM	ENSMUSG00000038840.8	ENSMUST00000108875.2	1178	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	4.30761599444003	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCAGCTAGGCTCTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	180570815	180575803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180571307_180572597_180572698_180573051_180573131_180573211_180573258_180574711_180574784_180574929_180575129_180575612
ENSMUST00000108883.10	chr11	-	2489	26	FSM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_6	73.4786608478952	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	False	NA	-4	True	NA	NA	NA	54924271	54869933	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ENSMUST00000108886.8	chr11	-	2642	17	FSM	ENSMUSG00000020400.18	ENSMUST00000108886.8	2642	17	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_16	76.2520491527933	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	6841	False	NA	-5	True	CATAAA	-18	NA	54853742	54801612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54853658
ENSMUST00000108889.10	chr11	-	2834	18	FSM	ENSMUSG00000020400.18	ENSMUST00000108889.10	2834	18	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	53.1161161918674	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGACTGGCTAATTCT	3582	False	NA	-3	True	CATAAA	-20	NA	54846948	54801610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
ENSMUST00000108895.8	chr11	+	1829	13	FSM	ENSMUSG00000037533.21	ENSMUST00000108895.8	1829	13	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	14.7082743152735	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTATGCTCATTATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	54413715	54525835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585
ENSMUST00000108920.10	chr11	+	2136	10	FSM	ENSMUSG00000018899.18	ENSMUST00000108920.10	2136	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	9.82940913537621	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGTGGCTTTTTATTTA	NA	False	NA	10	True	TATAAA	-17	NA	53660840	53668149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_53661105_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ENSMUST00000108923.2	chr2	-	1372	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	29	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATTTTAAAAGAATTCA	NA	False	NA	-14	True	NA	NA	NA	177720269	177710282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_177711409_177711615_177711743_177720150
ENSMUST00000108935.8	chr2	+	1451	3	FSM	ENSMUSG00000074521.10	ENSMUST00000108935.8	1451	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	14.5	914	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAATCAATGCGAGAACA	NA	False	NA	NA	False	NA	NA	NA	177538888	177547577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_177539047_177546077_177546205_177546411
ENSMUST00000108939.9	chr2	-	1576	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTAAAGCCTTTGCAGG	NA	False	NA	NA	False	NA	NA	NA	177482111	177473583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
ENSMUST00000108947.3	chr2	+	1209	4	FSM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	52.0405824546788	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACATACAGGAGAGAGACA	NA	False	NA	NA	False	NA	NA	NA	177190107	177201264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246
ENSMUST00000108955.2	chr2	-	1415	4	FSM	ENSMUSG00000078867.10	ENSMUST00000108955.2	1415	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	139.800651723167	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTCATATAGATAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	177090112	177079877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_177081015_177081219_177081347_177086489_177086545_177090016
ENSMUST00000108959.3	chr2	-	1581	4	FSM	ENSMUSG00000078868.4	ENSMUST00000108959.3	1581	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	8.04155872120988	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTAAAGCCTTTGCAGG	NA	False	NA	NA	False	NA	NA	NA	177016100	177006312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_177007703_177008856_177008918_177009124_177009252_177016097
ENSMUST00000108988.9	chr8	+	3274	14	FSM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_3	231.479471146212	2478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8827	False	NA	39	True	AATAAA	-21	NA	120637552	120684299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ENSMUST00000109007.8	chr2	+	1621	4	FSM	ENSMUSG00000078886.13	ENSMUST00000109007.8	1621	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	114.545478595476	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	175757123	175769428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_175757228_175760682_175760738_175767761_175767889_175768093
ENSMUST00000109011.8	chr2	+	1445	4	FSM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	81.1432204329001	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACATTAGATTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	175661011	175671449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349
ENSMUST00000109021.4	chr11	-	405	3	FSM	ENSMUSG00000044894.15	ENSMUST00000109021.4	405	3	0	0	0	0	multi-exon	FALSE	canonical	3	885	junction_2	2412.5	7295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	2947	False	NA	-8	True	AATAAA	-17	NA	53321654	53319779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_53319978_53321362_53321530_53321614
ENSMUST00000109042.10	chr2	+	1271	3	FSM	ENSMUSG00000078896.12	ENSMUST00000109042.10	1271	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	42.5	606	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTTCCCATTTCATT	NA	False	NA	NA	False	NA	NA	NA	175311777	175321130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_175311916_175319791_175319919_175320124
ENSMUST00000109054.3	chr2	-	4516	4	FSM	ENSMUSG00000078902.4	ENSMUST00000109054.3	4516	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	16.3571255285137	426	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	175017664	175008047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_175012254_175013387_175013449_175013640_175013768_175017542
ENSMUST00000109069.8	chr2	+	919	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	395.454450249611	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACATACCTTTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	174852033	174859405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749
ENSMUST00000109075.8	chr2	+	2279	15	FSM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_12	51.3083913254758	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257596	174269295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ENSMUST00000109102.4	chr8	-	2411	7	FSM	ENSMUSG00000031758.11	ENSMUST00000109102.4	2411	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	26.9670580935745	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTAGGAAATTTTTTTC	1769	False	NA	65	True	NA	NA	NA	117459730	117301138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117459536
ENSMUST00000109111.2	chr11	+	1427	9	FSM	ENSMUSG00000020385.17	ENSMUST00000109111.2	1427	9	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	22.366269246345	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGTGATTGAGTATT	NA	False	NA	13	True	AGTAAA	-13	NA	51164277	51172591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ENSMUST00000109113.8	chr11	+	1627	11	FSM	ENSMUSG00000020385.17	ENSMUST00000109113.8	1627	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	50.5050492525252	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGATTGAGTATTCT	NA	False	NA	15	True	AGTAAA	-15	NA	51154012	51172593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_51154097_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ENSMUST00000109140.10	chr2	-	1862	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109140.10	1862	9	0	0	0	0	multi-exon	FALSE	canonical	3	1025	junction_8	140.198965759381	3305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTGGGTAATCATTTGA	NA	False	NA	-2	True	AATATA	-22	NA	172212455	172198109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ENSMUST00000109142.8	chr11	+	2427	15	FSM	ENSMUSG00000007850.17	ENSMUST00000109142.8	2427	15	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	159.005711616063	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50267816	50277355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_50267975_50268140_50268268_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ENSMUST00000109148.8	chr2	+	736	4	FSM	ENSMUSG00000052033.14	ENSMUST00000109148.8	736	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	387.259029017472	2916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAGTATCCGACAGAGAT	4127	False	NA	68	True	AAGAAA	-1	NA	170353439	170361043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_170353476_170357658_170357767_170358469_170358611_170360592
ENSMUST00000109161.3	chr2	-	1009	6	FSM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	185.215982031789	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTACTGTTGTTACCATT	NA	False	NA	-1	True	TATAAA	-19	NA	168797209	168776732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_168776860_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ENSMUST00000109175.9	chr2	-	3729	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109175.9	3729	28	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_27	47.3339708993171	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	NA	False	NA	-23	True	GATAAA	-16	NA	168576259	168476357	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
ENSMUST00000109177.8	chr2	-	3456	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109177.8	3456	28	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_27	57.8025587882503	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	6290	False	NA	-23	True	GATAAA	-16	NA	168584053	168476357	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168584007
ENSMUST00000109193.8	chr2	-	1076	9	FSM	ENSMUSG00000078919.11	ENSMUST00000109193.8	1076	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	149.583118616373	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	-19	True	AATAAA	-23	NA	168072511	168052200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072308
ENSMUST00000109203.9	chr13	+	1525	11	FSM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	94.7694043454954	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTAGCTGGTTAGATG	NA	False	NA	109	True	AATAAA	-36	NA	119565136	119593927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUST00000109235.8	chr2	-	3569	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_8	51.6000192196774	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTATTTTCCTTTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	166838198	166789468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ENSMUST00000109236.9	chr2	-	2860	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109236.9	2860	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	83.3006106552479	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTGTTAATTTATT	NA	False	NA	NA	False	AATAAA	-13	NA	166838219	166790192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795266_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ENSMUST00000109238.9	chr2	-	2976	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_8	58.6274129884562	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGTCTTTTTCCAATT	NA	False	NA	-21	True	AATAAA	-9	NA	166838185	166790066	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ENSMUST00000109252.8	chr2	+	5757	23	FSM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_19	38.1274504699546	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCCCACTCATCATTTTA	NA	False	NA	16	True	ATTAAA	-22	NA	165834555	165913390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ENSMUST00000109262.8	chr2	-	2515	11	FSM	ENSMUSG00000039671.19	ENSMUST00000109262.8	2515	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	162.152520794467	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGCTCTCTTGTTCCGC	NA	False	NA	-20	True	AATAAA	-22	NA	165738870	165669101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165738772
ENSMUST00000109278.8	chr11	-	1965	8	FSM	ENSMUSG00000041278.11	ENSMUST00000109278.8	1965	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	255.299184231732	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTTCTGTACAACTTG	NA	False	NA	NA	False	NA	NA	NA	43638835	43620338	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_43621435_43627241_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
ENSMUST00000109297.8	chr8	+	1094	6	FSM	ENSMUSG00000060098.12	ENSMUST00000109297.8	1094	6	0	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_4	40.5186376868719	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCATAGAAACTCATGTGC	1906	False	NA	NA	False	NA	NA	NA	106937654	106962021	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479
ENSMUST00000109298.8	chr2	-	1991	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109298.8	1991	10	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_9	78.2020175926143	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5774	False	NA	-34	True	AATAAA	-18	NA	165129675	165118473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125521_165129603
ENSMUST00000109299.8	chr2	-	1926	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109299.8	1926	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	81.2874794847746	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5774	False	NA	-34	True	AATAAA	-18	NA	165129675	165118473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125456_165129603
ENSMUST00000109300.9	chr2	-	2008	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109300.9	2008	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_9	47.7596864973064	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5660	False	NA	-34	True	AATAAA	-18	NA	165129789	165118473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125524_165129703
ENSMUST00000109314.9	chr15	-	448	3	FSM	ENSMUSG00000078938.10	ENSMUST00000109314.9	448	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCAAAGGACCCCTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	89294466	89274376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_89274643_89281528_89281638_89294393
ENSMUST00000109315.5	chr13	-	4162	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	0	0	0	0	multi-exon	TRUE	canonical	3	279	junction_1	22.4276614920058	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGAGCTCACAGTACTT	NA	False	NA	-13	True	AATAAA	-19	NA	104246122	104159564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ENSMUST00000109317.10	chr2	-	1575	15	FSM	ENSMUSG00000017754.14	ENSMUST00000109317.10	1575	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	100.777285260568	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	False	NA	-1	True	NA	NA	NA	164699553	164681437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696846_164696976_164698623_164698724_164698806_164698918_164699503
ENSMUST00000109333.8	chr13	-	701	4	FSM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	0	0	0	0	multi-exon	FALSE	canonical	3	1082	junction_3	81.5693297481079	5509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-1	NA	100881167	100872462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037
ENSMUST00000109344.9	chr2	+	429	3	FSM	ENSMUSG00000017723.12	ENSMUST00000109344.9	429	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	240.5	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCTTGCCTCACTTTC	233	False	NA	26	True	AATAAA	-32	NA	164404618	164410430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_164404725_164407711_164407859_164410254
ENSMUST00000109345.9	chr2	+	558	4	FSM	ENSMUSG00000017723.12	ENSMUST00000109345.9	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	240.807438054189	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCTTGCCTCACTTTC	248	False	NA	26	True	AATAAA	-32	NA	164404633	164410430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_164404725_164405227_164405372_164407711_164407859_164410254
ENSMUST00000109354.10	chr11	+	1157	10	Antisense	novelGene_ENSMUSG00000057113.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26440	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACGCGGGCTCTCCGCA	NA	False	NA	NA	False	NA	NA	NA	33104926	33113077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr11_+_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUST00000109384.10	chr2	-	1923	7	FSM	ENSMUSG00000018322.11	ENSMUST00000109384.10	1923	7	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_3	35.0606617165164	1555	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGACGCATTT	5881	False	NA	-5	True	ATTAAA	-16	NA	163913089	163895459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912832
ENSMUST00000109392.9	chr8	+	2891	6	FSM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_5	26.6578318698277	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGTCATGACTCTT	3761	False	NA	74	True	ATTAAA	-14	NA	105897320	105944613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
ENSMUST00000109431.10	chr13	+	2726	2	FSM	ENSMUSG00000078952.10	ENSMUST00000109431.10	2726	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97571477	97633515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_97571601_97630912
ENSMUST00000109432.4	chr15	+	2273	15	FSM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	0	0	0	0	multi-exon	TRUE	canonical	3	356	junction_14	63.5701845785187	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTACCTTGGTTT	NA	False	NA	35	True	AATAAA	-25	NA	85090205	85136086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
ENSMUST00000109457.3	chr2	+	3215	20	FSM	ENSMUSG00000027412.13	ENSMUST00000109457.3	3215	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	11.783363078059	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTAGGCCATTGGCTC	NA	False	NA	NA	False	ATTAAA	-30	NA	160730090	160747712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_160730138_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743547_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ENSMUST00000109468.3	chr2	+	3856	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_7	40.333949719808	1051	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCGTCTGCCTGTTTGT	NA	False	NA	23	True	AATAAA	-21	NA	160487807	160564684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ENSMUST00000109509.8	chr11	+	1187	14	FSM	ENSMUSG00000004018.10	ENSMUST00000109509.8	1187	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	68.2542237026723	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAATTTATTTGATG	NA	False	NA	3	True	AATAAA	-10	NA	26337201	26421421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418815_26418883_26419651_26419769_26420876_26420949_26421324
ENSMUST00000109521.4	chr8	+	1580	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	0	0	0	0	multi-exon	FALSE	canonical	3	1933	junction_5	86.4056566435323	7455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTGCTTTAATTGCATT	NA	False	NA	NA	False	AATAAA	-17	NA	95584077	95590870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ENSMUST00000109525.8	chr11	+	3177	18	FSM	ENSMUSG00000020280.13	ENSMUST00000109525.8	3177	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.02183511099	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23615673	23682876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_23615749_23617287_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ENSMUST00000109566.9	chr2	+	1595	7	FSM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	73.2575365861197	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTAGAACCTTTTCCC	NA	False	NA	NA	False	NA	NA	NA	156562964	156605044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUST00000109587.9	chr2	-	2810	17	FSM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	0	0	0	0	multi-exon	FALSE	canonical	3	1358	junction_5	409.933526432945	2155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022158	155989158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ENSMUST00000109596.8	chr11	-	2171	4	FSM	ENSMUSG00000044066.15	ENSMUST00000109596.8	2171	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	18.3726850393609	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTAGCTCAGTTGACT	3055	False	NA	-8	True	AATAAA	-17	NA	20199418	20188385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_20188589_20189195_20190699_20191885_20192239_20199306
ENSMUST00000109597.10	chr2	+	550	2	FSM	ENSMUSG00000067847.14	ENSMUST00000109597.10	550	2	0	0	0	0	multi-exon	FALSE	canonical	3	985	junction_1	0	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTCTATTTTTACCTA	6545	False	NA	14	True	AATAAA	-19	NA	155986152	155987714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_155986510_155987521
ENSMUST00000109598.4	chr2	+	362	3	FSM	ENSMUSG00000067847.14	ENSMUST00000109598.4	362	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	492.5	3035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCGTTATATCAGTCT	6549	False	NA	3	True	AATAAA	-8	NA	155986156	155987703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_155986206_155986378_155986510_155987521
ENSMUST00000109600.2	chr2	-	709	3	FSM	ENSMUSG00000027618.18	ENSMUST00000109600.2	709	3	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_2	22	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCGCGGGTCAATGGGAC	3112	False	NA	0	True	TTTAAA	-6	NA	155986100	155983706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155984163_155985286_155985379_155985939
ENSMUST00000109601.8	chr11	+	1200	4	FSM	ENSMUSG00000020149.18	ENSMUST00000109601.8	1200	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	893.882542619555	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	NA	False	NA	16	True	AATAAA	-29	NA	20151438	20175464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20174647
ENSMUST00000109602.8	chr11	+	2626	4	FSM	ENSMUSG00000020149.18	ENSMUST00000109602.8	2626	4	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_2	873.996313239109	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATAGATGCGCTTGTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	20151434	20176850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_20151653_20165629_20165703_20174366_20174499_20174647
ENSMUST00000109605.5	chr15	+	1725	3	FSM	ENSMUSG00000042406.9	ENSMUST00000109605.5	1725	3	0	0	0	0	multi-exon	FALSE	canonical	3	1292	junction_2	43	14108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGGTTTTCAGTGT	4145	False	NA	32	True	AATAAA	-20	NA	80139384	80141742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_80139887_80140407_80140723_80140834
ENSMUST00000109609.9	chr8	-	1171	10	FSM	ENSMUSG00000031667.17	ENSMUST00000109609.9	1171	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_9	96.0081015100057	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTGGCTATCAGTGTTG	NA	False	NA	-9	True	AGTAAA	-12	NA	91860651	91851096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857777_91860527
ENSMUST00000109616.9	chr15	-	2899	7	FSM	ENSMUSG00000053411.17	ENSMUST00000109616.9	2899	7	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	127.989582909444	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79816853	79800007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ENSMUST00000109636.11	chr2	-	2633	10	FSM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_1	57.3294572333165	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTTACTGTGTG	NA	False	NA	-58	True	NA	NA	NA	155772230	155688840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ENSMUST00000109641.2	chr11	-	450	4	FSM	ENSMUSG00000078974.11	ENSMUST00000109641.2	450	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	2930.40759394775	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCATAACAGACATTTAT	NA	False	NA	-51	True	AATAAA	-6	NA	16458069	16451650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16457979
ENSMUST00000109664.2	chr11	-	2807	3	FSM	ENSMUSG00000035455.13	ENSMUST00000109664.2	2807	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	194	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGCAAGATGTAATCTT	NA	False	NA	NA	False	AATAAA	-11	NA	11758932	11750551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_11753064_11755958_11756216_11758894
ENSMUST00000109682.9	chr2	+	684	4	FSM	ENSMUSG00000047459.15	ENSMUST00000109682.9	684	4	0	0	0	0	multi-exon	FALSE	canonical	3	1428	junction_1	142.385236438177	6532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGTCTTTACTAGA	NA	False	NA	19	True	AGTAAA	-21	NA	155078454	155092197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_155078538_155084650_155084727_155089690_155089859_155091840
ENSMUST00000109685.8	chr2	+	5309	26	FSM	ENSMUSG00000027598.17	ENSMUST00000109685.8	5309	26	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	35.1837689851443	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTTGCCTTTTCGTCTG	NA	False	NA	55	True	AATAAA	-15	NA	154975478	155068773	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ENSMUST00000109687.9	chr15	+	2570	14	FSM	ENSMUSG00000033088.20	ENSMUST00000109687.9	2570	14	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_8	26.3687999246734	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTCTGTGGATGCTG	NA	False	NA	9	True	AATAAA	-13	NA	78867240	78890064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644_78888806_78889401
ENSMUST00000109703.3	chr2	-	560	3	FSM	ENSMUSG00000000876.12	ENSMUST00000109703.3	560	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	94.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCAAGTTTTCTGTTTTG	NA	False	NA	NA	False	AATAAA	-30	NA	154445608	154437165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_154437491_154438121_154438185_154445436
ENSMUST00000109731.8	chr2	-	2160	15	FSM	ENSMUSG00000027487.12	ENSMUST00000109731.8	2160	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	23.0212856251934	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTCTACTTTTTTCA	5389	False	NA	-9	True	AATAAA	-18	NA	154214930	154177299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600_154214775_154214881
ENSMUST00000109734.8	chr8	+	1612	6	FSM	ENSMUSG00000005161.16	ENSMUST00000109734.8	1612	6	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_1	1434.62463383284	9860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTAGGCTCTGACCC	NA	False	NA	NA	False	AATAAA	-37	NA	85696215	85701463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85696392_85696780_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUST00000109737.9	chr11	-	1633	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	0	0	0	0	multi-exon	FALSE	canonical	3	3133	junction_4	74.0485482639599	2492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTCCTGGTCCTGA	NA	False	NA	-5	True	AATAAA	-24	NA	6394443	6377228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
ENSMUST00000109738.10	chr8	-	2044	8	FSM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	0	0	0	0	multi-exon	FALSE	canonical	3	1021	junction_5	82.5459674041917	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACTATGTTATCTATTT	8283	False	NA	-7	True	NA	NA	NA	85692640	85683238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ENSMUST00000109742.11	chr13	-	2416	4	FSM	ENSMUSG00000058883.17	ENSMUST00000109742.11	2416	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6.68331255192114	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCAGTGTCGTGTTTAGT	NA	False	NA	1	True	AATAAA	-20	NA	67229576	67217462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67219593_67222149_67222246_67222896_67223024_67229513
ENSMUST00000109754.2	chr8	+	1795	13	FSM	ENSMUSG00000003808.19	ENSMUST00000109754.2	1795	13	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_9	182.281585435526	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTGTCATTCATTTCA	NA	False	NA	38	True	AATAAA	-38	NA	85583645	85595886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594381_85594548_85594637_85594716_85594852_85594968_85595494
ENSMUST00000109761.9	chr8	-	1842	9	FSM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_3	246.139156525328	2244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGCTTCTCACAGCTGT	NA	False	NA	-14	True	AATAAA	-37	NA	85567294	85561539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ENSMUST00000109767.9	chr8	+	2138	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109767.9	2138	17	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	116.091541869983	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415875	85426416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85415979_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUST00000109787.8	chr11	+	4116	20	FSM	ENSMUSG00000041164.16	ENSMUST00000109787.8	4116	20	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	72.0482679083075	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTCAGGATATCCCT	4623	False	NA	15	True	AATAAA	-18	NA	6339073	6356158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ENSMUST00000109802.3	chr8	-	2867	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCACGTTTGCTGGTGA	NA	False	NA	-11	True	ATTAAA	-19	NA	84467802	84449992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ENSMUST00000109805.8	chr11	-	2635	3	FSM	ENSMUSG00000053838.15	ENSMUST00000109805.8	2635	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	171	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGTTCTGTCTGTGA	NA	False	NA	-6	True	AATAAA	-14	NA	6069409	6055985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6058356_6063242_6063432_6069333
ENSMUST00000109810.2	chr8	+	1794	11	FSM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	682.0140834323	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAACGTGCCATCTTTTT	NA	False	NA	99	True	NA	NA	NA	84442176	84449977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_84442476_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUST00000109816.8	chr2	+	3483	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_2	86.1429969118501	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTCTTGTTGTCCTAG	2708	False	NA	NA	False	NA	NA	NA	152689897	152736574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUST00000109820.5	chr2	-	2568	3	FSM	ENSMUSG00000007659.19	ENSMUST00000109820.5	2568	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	91.5	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCACAGCCTTGGCTCT	NA	False	NA	-9	True	AATAAA	-18	NA	152672586	152622591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_152624203_152671346_152672023_152672305
ENSMUST00000109831.3	chr8	+	2293	15	FSM	ENSMUSG00000002190.14	ENSMUST00000109831.3	2293	15	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_5	6.81834260787527	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGAGCCAAGAGATTCG	NA	False	NA	12	True	AATAAA	-18	NA	84116506	84153460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_84116730_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
ENSMUST00000109832.3	chr12	+	4108	13	FSM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_12	229.453638502906	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	4921	False	NA	3	True	AATAAA	-17	NA	110452172	110549496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ENSMUST00000109845.8	chr11	+	2001	13	FSM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_7	40.5239126936183	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTCAGCCCATCCAT	NA	False	NA	-29	True	NA	NA	NA	5738487	5750629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ENSMUST00000109848.10	chr12	-	2831	10	FSM	ENSMUSG00000021266.17	ENSMUST00000109848.10	2831	10	0	0	0	0	multi-exon	FALSE	canonical	3	1835	junction_9	109.614475929657	2925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	False	NA	-31	True	AATAAA	-19	NA	108860100	108825955	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ENSMUST00000109861.8	chr2	+	2590	5	FSM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	23.0976189249022	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATCAAACTACTTAAAC	NA	False	NA	-18	True	NA	NA	NA	151841784	151851142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400_151849525_151849865
ENSMUST00000109878.9	chr11	+	1611	8	FSM	ENSMUSG00000034175.14	ENSMUST00000109878.9	1611	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	73.7707424998528	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5050156	5056091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_5050227_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ENSMUST00000109905.5	chr13	+	1420	5	FSM	ENSMUSG00000058569.9	ENSMUST00000109905.5	1420	5	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	31.3847096529504	3913	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCGTGGTTACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	55740981	55745510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_55741171_55741313_55741415_55742517_55742644_55743280_55743428_55744653
ENSMUST00000109926.8	chr2	+	1728	4	FSM	ENSMUSG00000079009.9	ENSMUST00000109926.8	1728	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	16.0485374896143	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATAGACAGTCATGGTT	NA	False	NA	NA	False	NA	NA	NA	150023674	150035199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_150023791_150032312_150032440_150032638_150032700_150033775
ENSMUST00000109930.3	chr11	+	4844	19	FSM	ENSMUSG00000020412.17	ENSMUST00000109930.3	4844	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	74.6390491252467	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGAGTCTCCTGTGTGT	NA	False	NA	14	True	AATAAA	-23	NA	4587746	4635699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ENSMUST00000109935.8	chr2	+	2050	4	FSM	ENSMUSG00000074736.11	ENSMUST00000109935.8	2050	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	14.290634073484	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATGATTTACTTCATG	NA	False	NA	NA	False	NA	NA	NA	149672707	149846312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_149672846_149741337_149741896_149772824_149772963_149845096
ENSMUST00000109940.2	chr8	+	2656	7	FSM	ENSMUSG00000034518.15	ENSMUST00000109940.2	2656	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	40.0489284084689	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACAGTTGTATAAAGAAA	NA	False	NA	-33	True	AATAAA	-25	NA	75742849	75758541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_75743035_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ENSMUST00000109950.5	chr8	+	1024	7	FSM	ENSMUSG00000031622.17	ENSMUST00000109950.5	1024	7	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_5	27.2197844713485	1716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGTTATGTGCAGCAGT	NA	False	NA	24	True	AATAAA	-21	NA	73449912	73466534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73466357
ENSMUST00000109961.8	chr2	+	1116	3	FSM	ENSMUSG00000036992.11	ENSMUST00000109961.8	1116	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	28	1857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTCTAAATCTTGAGA	NA	False	NA	15	True	AATAAA	-19	NA	148514520	148517947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_148514756_148516383_148516519_148517201
ENSMUST00000109966.8	chr15	+	1803	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109966.8	1803	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	7.71722460186015	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCCTGTTCTTCAGCC	NA	False	NA	11	True	AATAAA	-16	NA	75840971	75847598	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_75841254_75844930_75845058_75845390_75845505_75846318
ENSMUST00000109967.10	chr15	+	1703	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109967.10	1703	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16.779617264871	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGAAGCCTGTTCTTCA	NA	False	NA	8	True	AATAAA	-13	NA	75841027	75847595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_75841254_75844971_75845058_75845390_75845505_75846318
ENSMUST00000109972.9	chr15	-	1624	7	FSM	ENSMUSG00000055762.17	ENSMUST00000109972.9	1624	7	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_5	1042.33482571048	4997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAACCACCTGCCTCTGC	NA	False	NA	NA	False	NA	NA	NA	75781183	75766648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773105_75781093
ENSMUST00000109989.10	chr11	-	1949	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109989.10	1949	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	32.7813557369218	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3882044	3867191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881975
ENSMUST00000109990.8	chr11	-	1914	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109990.8	1914	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	47.7330540029071	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3881960	3867191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881926
ENSMUST00000109991.8	chr11	-	1943	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109991.8	1943	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	47.4250545858319	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3882078	3867191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881585_3882012
ENSMUST00000109992.8	chr11	-	1945	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109992.8	1945	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	47.4250545858319	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3881789	3867191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881724
ENSMUST00000109993.9	chr11	-	2027	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109993.9	2027	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	35.4989132158461	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3882159	3867191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3882012
ENSMUST00000109997.10	chr8	+	2713	4	FSM	ENSMUSG00000052446.18	ENSMUST00000109997.10	2713	4	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_3	51.1468474101777	1526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704914	72724177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_72705005_72719637_72719765_72719943_72720005_72721742
ENSMUST00000110000.8	chr2	+	1142	6	FSM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_2	184.608775522725	2624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTAATCATCCCTGTC	NA	False	NA	31	True	TATAAA	-16	NA	145745160	145758345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453_145757600_145757723
ENSMUST00000110009.4	chr15	-	3054	3	FSM	ENSMUSG00000022602.15	ENSMUST00000110009.4	3054	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	19	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTATGTGCCATTTCT	NA	False	NA	0	True	AATAAA	-14	NA	74544419	74540931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_74541843_74542028_74542166_74542413
ENSMUST00000110020.8	chr12	-	1835	13	FSM	ENSMUSG00000021190.15	ENSMUST00000110020.8	1835	13	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_3	47.188157648103	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTGGCTTTGTGGTTTG	9960	False	NA	-3	True	AAAACA	-29	NA	102390028	102360342	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843
ENSMUST00000110027.2	chr2	+	2359	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110027.2	2359	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	194.922420465169	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCTTTCAGTGGACC	NA	False	NA	14	True	AATAAA	-16	NA	144112860	144122436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144113264_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ENSMUST00000110030.10	chr2	-	2512	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTTCTGACTGTTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	144112826	144092042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ENSMUST00000110036.11	chr15	-	4417	32	FSM	ENSMUSG00000022607.19	ENSMUST00000110036.11	4417	32	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_30	29.7827373894676	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCATTGCCTTTTTTTT	1677	False	NA	-4	True	AATAAA	-44	NA	73295040	73076950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ENSMUST00000110043.8	chr11	+	3702	5	FSM	ENSMUSG00000020453.18	ENSMUST00000110043.8	3702	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	207.771960331513	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	6006	False	NA	14	True	ATTAAA	-16	NA	3239992	3259083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3256222_3256361_3257647
ENSMUST00000110048.8	chr11	+	3712	18	FSM	ENSMUSG00000020454.18	ENSMUST00000110048.8	3712	18	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	69.9066109610197	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGGTACTGTGTTTAT	4202	False	NA	13	True	ATTAAA	-29	NA	3153020	3194587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_3153327_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ENSMUST00000110049.8	chr11	+	3614	19	FSM	ENSMUSG00000020454.18	ENSMUST00000110049.8	3614	19	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_10	64.4808326386825	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTACTGTGTTTATT	3844	False	NA	14	True	ATTAAA	-30	NA	3152662	3194588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ENSMUST00000110053.9	chr8	+	1064	9	FSM	ENSMUSG00000002395.15	ENSMUST00000110053.9	1064	9	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	224.605626599157	3536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACATGTCTTCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	71819491	71822373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
ENSMUST00000110054.8	chr8	+	973	9	FSM	ENSMUSG00000002395.15	ENSMUST00000110054.8	973	9	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	224.605626599157	4775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTCTTCAGTGCTAG	NA	False	NA	22	True	AATAAA	-23	NA	71819585	71822376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
ENSMUST00000110057.3	chr2	-	3977	3	FSM	ENSMUSG00000051379.13	ENSMUST00000110057.3	3977	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	10.5	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGTATCCTTTTTACT	NA	False	NA	1	True	AATAAA	-36	NA	140513389	140500117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_140503672_140505180_140505380_140513165
ENSMUST00000110071.3	chr8	-	1452	11	FSM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	129.467524885587	1587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	696	False	NA	-9	True	NA	NA	NA	71725020	71703768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709196_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ENSMUST00000110079.9	chr2	-	2258	14	FSM	ENSMUSG00000039033.12	ENSMUST00000110079.9	2258	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	20.460092487948	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGTGTGACTGCTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	139908725	139675399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ENSMUST00000110082.11	chr12	+	4115	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	0	0	0	0	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	8185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTGAACTGTGTAGGT	9165	False	NA	27	True	AATAAA	-24	NA	100165693	100176073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUST00000110089.9	chr2	-	3178	6	FSM	ENSMUSG00000027274.17	ENSMUST00000110089.9	3178	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	119.159389055164	1556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATACAATCCTTACTA	NA	False	NA	0	True	AATAAA	-20	NA	136733309	136715699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136732962
ENSMUST00000110093.9	chr8	+	1442	5	FSM	ENSMUSG00000031840.15	ENSMUST00000110093.9	1442	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	12.8646803302686	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACCCTGCCCAGCCTTGC	NA	False	NA	88	True	ATTAAA	-19	NA	71207327	71211323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71207518_71208502_71208731_71209093_71209213_71209783_71209909_71210543
ENSMUST00000110103.2	chr8	-	1380	3	FSM	ENSMUSG00000038508.8	ENSMUST00000110103.2	1380	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	118	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCGTCTCAGTGACCTT	654	False	NA	-7	True	AATAAA	-17	NA	71085106	71082043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71082825_71083982_71084275_71084799
ENSMUST00000110118.8	chr13	-	881	9	FSM	ENSMUSG00000021376.12	ENSMUST00000110118.8	881	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	45.7764609269874	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATTAGCCATGGTTTC	NA	False	NA	-2	True	ATTAAA	-17	NA	47196600	47178654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_47178849_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
ENSMUST00000110136.8	chr2	-	3546	19	FSM	ENSMUSG00000027346.16	ENSMUST00000110136.8	3546	19	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_17	25.7024762221584	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCTTCCTGATTTGTT	NA	False	NA	0	True	NA	NA	NA	132420107	132371001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132414104_132414178_132419987
ENSMUST00000110143.8	chr8	+	1312	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110143.8	1312	9	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_6	45.467021015237	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8589	False	NA	5	True	NA	NA	NA	70605427	70620138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
ENSMUST00000110146.9	chr8	+	1342	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110146.9	1342	9	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_6	49.3303595669036	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8589	False	NA	5	True	NA	NA	NA	70605427	70620138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
ENSMUST00000110163.8	chr2	-	1551	4	FSM	ENSMUSG00000027341.11	ENSMUST00000110163.8	1551	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	223.123782287371	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTTGTTATTGAT	4908	False	NA	-2	True	TATAAA	-20	NA	132089689	132081411	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089515
ENSMUST00000110169.2	chr2	+	1918	3	FSM	ENSMUSG00000027338.17	ENSMUST00000110169.2	1918	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	0.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGGTGTCTGGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	131792956	131798050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_131792991_131794928_131795503_131796740
ENSMUST00000110171.9	chr2	+	1938	3	FSM	ENSMUSG00000027338.17	ENSMUST00000110171.9	1938	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	6	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGGTGTCTGGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	131792781	131798050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_131792836_131794928_131795503_131796740
ENSMUST00000110175.9	chr15	+	3468	18	FSM	ENSMUSG00000022364.15	ENSMUST00000110175.9	3468	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	61.9542190614616	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTCTGCATGTAATTG	NA	False	NA	2	True	AATAAA	-16	NA	57775629	57822798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57821910
ENSMUST00000110179.9	chr2	+	1320	6	FSM	ENSMUSG00000027333.19	ENSMUST00000110179.9	1320	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	49.3128786423993	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCTTCTCTCCTCAG	NA	False	NA	20	True	AATAAA	-21	NA	131333862	131367092	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131363978_131364140_131366662
ENSMUST00000110186.9	chr2	+	2170	8	FSM	ENSMUSG00000027333.19	ENSMUST00000110186.9	2170	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	48.183746942177	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCTTCTCTCCTCAG	NA	False	NA	20	True	AATAAA	-21	NA	131333862	131367092	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366163_131366254_131366662
ENSMUST00000110191.10	chr13	+	4352	3	FSM	ENSMUSG00000021360.17	ENSMUST00000110191.10	4352	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	71.5	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGGAATAGTGGATATT	NA	False	NA	15	True	AATAAA	-20	NA	41013229	41114363	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_41014750_41107051_41107148_41111627
ENSMUST00000110199.3	chr2	+	3057	7	FSM	ENSMUSG00000037523.14	ENSMUST00000110199.3	3057	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	57.107111835762	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	7302	False	NA	14	True	ATTAAA	-19	NA	131076024	131089945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_131076276_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ENSMUST00000110208.8	chr2	+	1521	3	FSM	ENSMUSG00000068264.12	ENSMUST00000110208.8	1521	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	10	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	11	True	ATTAAA	-17	NA	131052359	131055434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_131052602_131053182_131053394_131054366
ENSMUST00000110262.3	chr2	-	3015	2	FSM	ENSMUSG00000079043.4	ENSMUST00000110262.3	3015	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAAAGTCTTACTGCAT	NA	False	NA	-5	True	AATAAA	-25	NA	130471947	130455759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_130458663_130471835
ENSMUST00000110273.9	chr13	-	1325	7	FSM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_6	71.5830908028488	2466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGAACCGAGTGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	34089153	34063798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
ENSMUST00000110276.8	chr12	+	1776	13	FSM	ENSMUSG00000021235.14	ENSMUST00000110276.8	1776	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65.39808653334	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTCTTTTCCTCTT	NA	False	NA	13	True	AATAAA	-13	NA	84408430	84420566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_84408594_84408726_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ENSMUST00000110340.9	chr12	-	668	4	FSM	ENSMUSG00000091803.8	ENSMUST00000110340.9	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	77.5127229699888	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTCTCAGTGTTCC	998	False	NA	-46	True	AATAAA	-19	NA	81531884	81405799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81531670
ENSMUST00000110347.9	chr12	+	3496	13	FSM	ENSMUSG00000021136.14	ENSMUST00000110347.9	3496	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	48.9003379901975	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81073581	81233188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ENSMUST00000110351.8	chr12	+	1498	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110351.8	1498	8	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_7	580.121838012305	8211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992305	80997277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
ENSMUST00000110354.8	chr12	+	1489	9	FSM	ENSMUSG00000021134.18	ENSMUST00000110354.8	1489	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	756.029885322002	6503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992293	80997277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_80992355_80992375_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
ENSMUST00000110356.3	chr12	+	1568	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110356.3	1568	8	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_1	476.276244656911	7143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992358	80997277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ENSMUST00000110361.8	chr15	-	2285	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110361.8	2285	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_5	1591.90916826306	8673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAAAAAAACCGCT	NA	False	NA	NA	False	NA	NA	NA	36794775	36771812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36794388
ENSMUST00000110362.4	chr15	-	2122	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	0	0	0	0	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	4228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCAACTACTTTTCTCT	440	False	NA	-12	True	NA	NA	NA	36794081	36771947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
ENSMUST00000110372.9	chr8	+	3429	21	FSM	ENSMUSG00000018796.14	ENSMUST00000110372.9	3429	21	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	90.7041344151412	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTACCTGATTTATGTG	9507	False	NA	NA	False	ATTAAA	-32	NA	46944002	46988618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_46944199_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ENSMUST00000110382.9	chr13	-	963	7	FSM	ENSMUSG00000006715.12	ENSMUST00000110382.9	963	7	0	0	0	0	multi-exon	FALSE	canonical	3	1483	junction_6	81.6382603658086	6758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGTGGAGAATTAAGTGT	NA	False	NA	-8	True	AATAAA	-26	NA	24945906	24935827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945795
ENSMUST00000110387.4	chr2	-	2695	18	FSM	ENSMUSG00000034906.16	ENSMUST00000110387.4	2695	18	0	0	0	0	multi-exon	TRUE	canonical	3	394	junction_9	30.9044738701424	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCAGTATTAGCGTCACA	NA	False	NA	13	True	AATAAA	-34	NA	126975874	126945728	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ENSMUST00000110395.11	chr12	-	1942	5	FSM	ENSMUSG00000059436.14	ENSMUST00000110395.11	1942	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	22.1697992773954	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTAGTGTCTTCTTAAC	NA	False	NA	0	True	AATAAA	-20	NA	77008959	76984042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_76985530_76986740_76986865_76999942_77000051_77008036_77008064_77008763
ENSMUST00000110416.3	chr2	+	4154	19	FSM	ENSMUSG00000027363.16	ENSMUST00000110416.3	4154	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	95.792745028003	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCATTTGAAACCT	3593	False	NA	-1	True	ATTAAA	-13	NA	126549279	126601210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_126549408_126559914_126560085_126561911_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ENSMUST00000110437.4	chr2	+	1276	4	FSM	ENSMUSG00000023330.13	ENSMUST00000110437.4	1276	4	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_3	13.6381816969859	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCCCTTACCTTTCGACT	9679	False	NA	28	True	ATTAAA	-26	NA	125996460	126007199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_125996781_126000329_126000474_126001689_126001949_126006646
ENSMUST00000110456.3	chr17	+	891	4	FSM	ENSMUSG00000025731.17	ENSMUST00000110456.3	891	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	203.922098415601	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGCTTGCTGGGAAT	7158	False	NA	30	True	AATAAA	-31	NA	26094437	26096134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26094701_26095193_26095254_26095468_26095537_26095634
ENSMUST00000110463.8	chr2	-	3392	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	1830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGGTGTGTGCATGTGA	NA	False	NA	-4	True	AATAAA	-22	NA	125701059	125672223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ENSMUST00000110485.3	chr13	-	4366	6	FSM	ENSMUSG00000022228.15	ENSMUST00000110485.3	4366	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	4.81663783151692	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCATTATTGAGGATAGT	NA	False	NA	NA	False	AATAAA	-14	NA	21637900	21626349	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_21630000_21631955_21632065_21632336_21632655_21633443_21633504_21633610_21633687_21637747
ENSMUST00000110512.4	chr2	+	751	4	FSM	ENSMUSG00000033213.17	ENSMUST00000110512.4	751	4	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	25.0377492776186	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATTTGTGCAAGAGATA	NA	False	NA	23	True	AATAAA	-25	NA	122479834	122483005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_122480054_122480176_122480263_122481135_122481197_122482620
ENSMUST00000110551.4	chr2	+	2352	9	FSM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	10.5763592507063	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTATGTGGTTTGTGCCT	NA	False	NA	16	True	AATAAA	-19	NA	122065229	122095821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_122065440_122076962_122076997_122079279_122079445_122083667_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
ENSMUST00000110578.8	chr2	+	3386	13	FSM	ENSMUSG00000033411.17	ENSMUST00000110578.8	3386	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	105.582774268449	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAATCATGGCAG	NA	False	NA	NA	False	NA	NA	NA	121786891	121842869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809375_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ENSMUST00000110609.8	chr8	-	2300	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110609.8	2300	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_15	868.905733283728	3887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGCTTGTATGGTACTTG	NA	False	NA	-22	True	AATAAA	-9	NA	26330485	26306913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330396
ENSMUST00000110610.8	chr8	-	2337	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	0	0	0	0	multi-exon	TRUE	canonical	3	3119	junction_12	186.058007680998	5406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTACTTGGCTTCACTGG	NA	False	NA	-12	True	AATAAA	-19	NA	26337722	26306903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ENSMUST00000110619.2	chr12	-	1276	1	FSM	ENSMUSG00000049751.7	ENSMUST00000110619.2	1276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31932	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCTTGTGTTTTGATT	NA	False	NA	-5	True	AATAAA	-17	NA	69230787	69229511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_69229500_69230800
ENSMUST00000110620.2	chr12	-	757	2	FSM	ENSMUSG00000049751.7	ENSMUST00000110620.2	757	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	22489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTTGATTCTCAGTA	NA	False	NA	2	True	AATAAA	-24	NA	69230760	69229504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_69229940_69230438
ENSMUST00000110621.3	chr12	+	1500	4	FSM	ENSMUSG00000034883.10	ENSMUST00000110621.3	1500	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	15.6276108929747	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATGTCTCAGCAGTTA	NA	False	NA	9	True	ATTAAA	-23	NA	69215587	69225783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_69215837_69218635_69218735_69221165_69221888_69225353
ENSMUST00000110636.9	chr13	-	4117	15	FSM	ENSMUSG00000021156.18	ENSMUST00000110636.9	4117	15	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_14	35.3204716033877	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCAGTAAGCTGCTT	NA	False	NA	2	True	AATAAA	-22	NA	9815350	9734868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815090
ENSMUST00000110637.8	chr13	-	3770	14	FSM	ENSMUSG00000021156.18	ENSMUST00000110637.8	3770	14	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_11	32.3144681539246	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814459	9734871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ENSMUST00000110658.8	chr2	+	4250	18	FSM	ENSMUSG00000027263.13	ENSMUST00000110658.8	4250	18	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_12	41.5047418810901	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001648	121029251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ENSMUST00000110690.9	chr15	+	3527	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTGTGTGTCCTCTTA	NA	False	NA	16	True	AATAAA	-20	NA	4055864	4184826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ENSMUST00000110706.2	chr2	+	3055	6	FSM	ENSMUSG00000027285.14	ENSMUST00000110706.2	3055	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	110.188202635309	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTCCAATATGAATCC	NA	False	NA	NA	False	AATAAA	-16	NA	120440075	120452041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_120440140_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455
ENSMUST00000110707.8	chr5	+	2757	14	FSM	ENSMUSG00000079109.12	ENSMUST00000110707.8	2757	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	36.7243047070059	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCATGTCTGCAGTTAC	NA	False	NA	NA	False	AAAAAG	-17	NA	143846807	143868260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_143846898_143848743_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143865759_143865861_143865998_143866169_143867833
ENSMUST00000110711.9	chr2	+	2723	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGACCAGTAATGCCC	NA	False	NA	10	True	NA	NA	NA	120398151	120431736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ENSMUST00000110730.10	chr8	-	2050	16	FSM	ENSMUSG00000031478.17	ENSMUST00000110730.10	2050	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	9.555917305814	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTGTGCTGGTTTTCAA	NA	False	NA	2	True	AATACA	-17	NA	22656451	22618298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622216_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339_22652511_22656393
ENSMUST00000110731.4	chr5	+	1829	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_2	10.3531396204243	4385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTATGGTCTTTTCTAT	NA	False	NA	NA	False	AATAAA	-15	NA	143389592	143407656	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
ENSMUST00000110801.8	chr2	-	1478	5	FSM	ENSMUSG00000027305.10	ENSMUST00000110801.8	1478	5	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	75.083287088406	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	False	NA	-1	True	AATAAA	-21	NA	119493301	119485926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493089
ENSMUST00000110802.8	chr2	-	1308	5	FSM	ENSMUSG00000027305.10	ENSMUST00000110802.8	1308	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	88.8453712919249	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	False	NA	-1	True	AATAAA	-21	NA	119493302	119485926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493260
ENSMUST00000110805.3	chr2	-	1778	5	FSM	ENSMUSG00000072980.4	ENSMUST00000110805.3	1778	5	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_4	27.7758888246623	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAGAATT	7480	False	NA	NA	False	NA	NA	NA	119448950	119439992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334
ENSMUST00000110813.5	chr8	-	1557	6	FSM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_5	39.1591624016653	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATATTTGTGATAAGATT	NA	False	NA	-6	True	AATAAA	-18	NA	14140301	14077560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140240
ENSMUST00000110817.3	chr2	+	2323	10	FSM	ENSMUSG00000027315.14	ENSMUST00000110817.3	2323	10	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_4	16.649620912898	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCCTCCCACCCCCAC	NA	False	NA	26	True	AATAAA	-14	NA	119068033	119080008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ENSMUST00000110820.3	chr2	-	790	5	FSM	ENSMUSG00000027317.9	ENSMUST00000110820.3	790	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	21.0297408448131	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCTTTAGGAACCCAGA	NA	False	NA	NA	False	NA	NA	NA	119060346	119048620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_119048905_119049106_119049140_119049244_119049329_119058237_119058303_119060022
ENSMUST00000110827.8	chr5	+	744	5	FSM	ENSMUSG00000036639.13	ENSMUST00000110827.8	744	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	84.8071341338687	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTTGTGGCACCTTTAA	NA	False	NA	53	True	NA	NA	NA	140317708	140323696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_140317742_140318177_140318229_140320209_140320375_140321067_140321214_140323347
ENSMUST00000110831.4	chr1	+	2257	2	FSM	ENSMUSG00000079144.8	ENSMUST00000110831.4	2257	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCCTGAAATCATTTG	961	False	NA	NA	False	AATAAA	-17	NA	192855887	192858608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_192856089_192856552
ENSMUST00000110838.8	chr8	-	2955	6	FSM	ENSMUSG00000038506.14	ENSMUST00000110838.8	2955	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	13.5558105622644	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	False	NA	-3	True	AATAAA	-14	NA	13338131	13305963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_13307977_13308946_13309044_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ENSMUST00000110839.10	chr8	-	2937	6	FSM	ENSMUSG00000038506.14	ENSMUST00000110839.10	2937	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	17.0105849399719	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	False	NA	-2	True	AATAAA	-15	NA	13338126	13305962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_13307977_13311384_13311468_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ENSMUST00000110840.8	chr8	-	2853	5	FSM	ENSMUSG00000038506.14	ENSMUST00000110840.8	2853	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	12.0701077045733	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	False	NA	-2	True	AATAAA	-15	NA	13338125	13305962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_13307977_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ENSMUST00000110851.8	chr5	-	3121	7	FSM	ENSMUSG00000053581.14	ENSMUST00000110851.8	3121	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	12.5532200384337	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATTCTAGACAGTTT	8709	False	NA	-11	True	AATAAA	-19	NA	139470272	139456970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_139459310_139459484_139459551_139460607_139460760_139464221_139464354_139467720_139467816_139468456_139468553_139470031
ENSMUST00000110878.2	chr5	+	1180	9	FSM	ENSMUSG00000025858.13	ENSMUST00000110878.2	1180	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	399.478546826985	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCTCTGCTTCCTTG	NA	False	NA	NA	False	AATAAA	-31	NA	139239265	139255084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_139239357_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
ENSMUST00000110883.9	chr5	+	3714	20	FSM	ENSMUSG00000036817.15	ENSMUST00000110883.9	3714	20	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	213.143404315789	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186397	139235550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUST00000110884.9	chr5	+	3955	22	FSM	ENSMUSG00000036817.15	ENSMUST00000110884.9	3955	22	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_8	208.642464528521	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186414	139235550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUST00000110893.10	chr1	-	1242	10	FSM	ENSMUSG00000026632.18	ENSMUST00000110893.10	1242	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	11.4309521329882	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGATTTGTCTTGGACA	NA	False	NA	12	True	TATAAA	-32	NA	190795129	190778022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_190778518_190781478_190781560_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
ENSMUST00000110918.3	chr2	+	2735	11	FSM	ENSMUSG00000040282.14	ENSMUST00000110918.3	2735	11	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_9	22.3015694514983	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTACCCTTCTACCTGGA	NA	False	NA	7	True	AATAAA	-17	NA	115412213	115609249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ENSMUST00000110934.9	chr5	+	1855	6	FSM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	26.1350339582714	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAAGTGTAATACATAATA	5598	False	NA	NA	False	AAAACA	-12	NA	138185746	138192180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138185983_138188531_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
ENSMUST00000110936.8	chr5	-	2308	15	FSM	ENSMUSG00000036980.14	ENSMUST00000110936.8	2308	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	183.295568157341	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	9932	False	NA	-4	True	AATAAA	-18	NA	138185713	138176878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185652
ENSMUST00000110942.11	chr12	+	2351	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAGGGAAGCTAAGATAA	NA	False	NA	NA	False	NA	NA	NA	24881621	25009873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ENSMUST00000110943.9	chr1	+	4702	8	FSM	ENSMUSG00000039210.17	ENSMUST00000110943.9	4702	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	24.9038969166003	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTTGTTGGTGTGTTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	186947718	187083901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187073683_187073773_187080553
ENSMUST00000110951.8	chr5	+	1098	10	FSM	ENSMUSG00000019494.15	ENSMUST00000110951.8	1098	10	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	1439.16262518466	6144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAGCCCTTCCAGTGGC	NA	False	NA	11	True	AATAAA	-12	NA	138159361	138162240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138159453_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ENSMUST00000110960.9	chr5	+	2204	4	FSM	ENSMUSG00000037017.16	ENSMUST00000110960.9	2204	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	50.6776303927307	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATTTTATTGGGT	NA	False	NA	55	True	TATAAA	-6	NA	138115198	138132527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138115270_138123239_138123953_138124715_138124909_138131300
ENSMUST00000110961.9	chr5	+	2310	5	FSM	ENSMUSG00000037017.16	ENSMUST00000110961.9	2310	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	38.7774096607806	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATTTTATTGGGT	NA	False	NA	55	True	TATAAA	-6	NA	138115177	138132527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138115270_138116097_138116183_138123239_138123953_138124715_138124909_138131300
ENSMUST00000111035.2	chr5	-	988	1	FSM	ENSMUSG00000029715.6	ENSMUST00000111035.2	988	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1533	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTCGAATGGCCTCT	1732	False	NA	-32	True	AATAAA	-20	NA	137500687	137499699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137499700_137500700
ENSMUST00000111059.2	chr1	+	3127	4	FSM	ENSMUSG00000062169.14	ENSMUST00000111059.2	3127	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	804.702429473156	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTGTTCTATTGCTTG	NA	False	NA	NA	False	NA	NA	NA	180978495	180996559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180993745
ENSMUST00000111080.8	chr5	-	1353	5	FSM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_4	57.0586321252096	1519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTTGGCTTTGTTGG	NA	False	NA	1	True	AATAAA	-25	NA	137074989	137063846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137074861
ENSMUST00000111094.8	chr5	+	948	5	FSM	ENSMUSG00000019054.14	ENSMUST00000111094.8	948	5	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	181.92443486239	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGTGTGTGAGCGAG	4051	False	NA	18	True	AATAAA	-19	NA	136982128	136995086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_136982445_136991852_136991986_136993946_136994024_136994418_136994525_136994770
ENSMUST00000111108.10	chr1	-	1997	11	FSM	ENSMUSG00000010609.16	ENSMUST00000111108.10	1997	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_10	6.79411510058521	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGTTTGGCCCCTTT	NA	False	NA	2	True	AATAAA	-19	NA	180083865	180054568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180061175_180061275_180062553_180062775_180063475_180063544_180066437_180066580_180068295_180068511_180073178_180073323_180083787
ENSMUST00000111129.2	chr5	+	474	3	FSM	ENSMUSG00000039771.14	ENSMUST00000111129.2	474	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	632.5	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAAATGGGGCTGTGCAG	9283	False	NA	19	True	AATAAA	-8	NA	136145555	136151790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_136145660_136150942_136151118_136151595
ENSMUST00000111131.9	chr2	+	555	5	FSM	ENSMUSG00000068686.13	ENSMUST00000111131.9	555	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	30.2933573576783	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACAATAAAATTTGAGCC	NA	False	NA	NA	False	NA	NA	NA	103900193	103921505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_103900265_103909202_103909282_103911341_103911444_103920473_103920620_103921348
ENSMUST00000111132.8	chr2	+	436	4	FSM	ENSMUSG00000068686.13	ENSMUST00000111132.8	436	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	23.6690139681023	6176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	103900193	103921532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_103900265_103909202_103909282_103911341_103911444_103921348
ENSMUST00000111134.2	chr1	-	1229	6	FSM	ENSMUSG00000055067.16	ENSMUST00000111134.2	1229	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	165.062412438447	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTAGATCAAGGGGCAG	NA	False	NA	NA	False	NA	NA	NA	179345606	179222788	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_179223397_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
ENSMUST00000111187.10	chr5	+	564	3	FSM	ENSMUSG00000029681.13	ENSMUST00000111187.10	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	118	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAAAGTGTCTATTTTTG	8775	False	NA	NA	False	AAAACA	-3	NA	135197242	135202302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135197453_135199940_135200017_135202024
ENSMUST00000111188.5	chr5	+	1434	5	FSM	ENSMUSG00000029681.13	ENSMUST00000111188.5	1434	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	127.801604058791	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAAATATGTCTTGTT	8798	False	NA	5	True	AATAGA	-17	NA	135197265	135210685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135197453_135199940_135200017_135205982_135206080_135209369_135209450_135209691
ENSMUST00000111205.8	chr5	-	1169	10	FSM	ENSMUSG00000005378.18	ENSMUST00000111205.8	1169	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	333.393994480338	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	False	NA	-3	True	ATTAAA	-14	NA	135092932	135081812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_135082279_135082402_135082493_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867
ENSMUST00000111216.8	chr5	+	972	6	FSM	ENSMUSG00000040532.15	ENSMUST00000111216.8	972	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	236.865024855929	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAACACTTTTAATGAAT	NA	False	NA	-29	True	NA	NA	NA	135038005	135040985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135038070_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
ENSMUST00000111218.8	chr5	+	1387	6	FSM	ENSMUSG00000040557.15	ENSMUST00000111218.8	1387	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	38.4988311510882	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAGAAAAAAAATAAAAATA	3436	False	NA	16	True	NA	NA	NA	134961245	134970056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_134961303_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ENSMUST00000111222.2	chr2	-	3710	6	FSM	ENSMUSG00000048058.18	ENSMUST00000111222.2	3710	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	25.560907652116	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCGTGTGAATGGTTCT	NA	False	NA	-2	True	AATAAA	-18	NA	102016703	101780547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_101783521_101785173_101785520_101888251_101888387_101900277_101900404_101943973_101944025_102016624
ENSMUST00000111230.8	chr1	+	1586	5	FSM	ENSMUSG00000026547.16	ENSMUST00000111230.8	1586	5	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_4	118.904373342615	3386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTTTCTAGGGCC	NA	False	NA	29	True	AATAAA	-26	NA	172327613	172334947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133
ENSMUST00000111234.10	chr14	-	4051	10	FSM	ENSMUSG00000060548.14	ENSMUST00000111234.10	4051	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_9	13.3813948598441	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAGAACAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	61283918	61201484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61283563
ENSMUST00000111236.4	chr14	-	3958	10	FSM	ENSMUSG00000060548.14	ENSMUST00000111236.4	3958	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	15.475986974649	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATTGATACTTGTTA	NA	False	NA	-26	True	AATACA	-32	NA	61275399	61201323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61275298
ENSMUST00000111238.8	chr2	-	4590	25	FSM	ENSMUSG00000027194.17	ENSMUST00000111238.8	4590	25	0	0	0	0	multi-exon	TRUE	canonical	3	116	junction_1	40.2833497103814	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGTGGTGTAGTTTTTC	NA	False	NA	-2	True	AATAAA	-21	NA	94237034	94131111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ENSMUST00000111265.9	chr2	-	3751	10	FSM	ENSMUSG00000027217.14	ENSMUST00000111265.9	3751	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	5.53774924194538	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTCTCATTGGTTGT	NA	False	NA	-11	True	TATAAA	-16	NA	93164832	93032104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
ENSMUST00000111266.8	chr2	+	2703	8	FSM	ENSMUSG00000068735.15	ENSMUST00000111266.8	2703	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	82.3119997699148	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGGTGTCCTGTTTTAT	NA	False	NA	20	True	NA	NA	NA	93017892	93032104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_93018093_93027241_93027324_93027953_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ENSMUST00000111295.8	chr1	-	1335	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	27.0025718939676	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	879	False	NA	-10	True	AATATA	-8	NA	171173213	171169811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173135
ENSMUST00000111302.4	chr1	-	914	6	FSM	ENSMUSG00000062963.11	ENSMUST00000111302.4	914	6	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_3	38.9943585663362	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAAGATTTGGGCCTTGA	7320	False	NA	NA	False	AATGAA	-14	NA	171122560	171116284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171117790_171122206
ENSMUST00000111307.2	chr5	-	932	3	FSM	ENSMUSG00000025534.18	ENSMUST00000111307.2	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	55.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTCGCTATTGTCTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	130031722	130028439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_130028911_130029597_130029784_130031447
ENSMUST00000111309.8	chr2	-	771	5	FSM	ENSMUSG00000027239.15	ENSMUST00000111309.8	771	5	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	1107.84859073792	1905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGCCCCTTCCCAGTT	NA	False	NA	NA	False	AATAAA	-42	NA	91762033	91760149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91761971
ENSMUST00000111317.9	chr2	+	4929	18	FSM	ENSMUSG00000040506.17	ENSMUST00000111317.9	4929	18	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_8	30.449799858434	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	NA	False	NA	6	True	ATTAAA	-18	NA	91560482	91749193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ENSMUST00000111318.8	chr1	-	1545	12	FSM	ENSMUSG00000013593.13	ENSMUST00000111318.8	1545	12	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	412.075336127544	2573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTAATGTGTCTTTCTT	NA	False	NA	-1	True	ATTAAA	-28	NA	171074691	171062421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
ENSMUST00000111320.8	chr1	+	470	4	FSM	ENSMUSG00000005681.13	ENSMUST00000111320.8	470	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.0467198900061	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGCCTCTTGTGTCTT	1396	False	NA	11	True	AATAAA	-17	NA	171052652	171053942	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171052691_171052867_171052936_171053234_171053368_171053711
ENSMUST00000111325.5	chr14	-	1255	6	FSM	ENSMUSG00000022223.10	ENSMUST00000111325.5	1255	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	35.4547599061113	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTTCCGCTGTCTC	NA	False	NA	-6	True	AATAAA	-20	NA	56137715	56134739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270_56137378_56137646
ENSMUST00000111331.9	chr2	+	2883	13	FSM	ENSMUSG00000027247.17	ENSMUST00000111331.9	2883	13	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	81.5357368819887	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGGCTGTTTAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	91480462	91502671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_91480598_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUST00000111338.10	chr2	+	6665	44	FSM	ENSMUSG00000040549.17	ENSMUST00000111338.10	6665	44	0	0	0	0	multi-exon	TRUE	canonical	3	508	junction_5	59.4884084586321	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTTCCCAAAATGCTC	NA	False	NA	11	True	AATAAA	-16	NA	91357106	91451009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ENSMUST00000111343.2	chr5	+	2423	6	FSM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	0	0	0	0	multi-exon	FALSE	canonical	3	14794	junction_4	293.478040064329	13485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGAGTCATCTCTAGT	545	False	NA	21	True	AATATA	-23	NA	129097335	129101387	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ENSMUST00000111351.10	chr1	-	2287	11	FSM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_3	44.8905335232274	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTTCTACCTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	170002515	169969570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ENSMUST00000111352.8	chr2	-	2228	9	FSM	ENSMUSG00000002109.15	ENSMUST00000111352.8	2228	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	15.7594217850783	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCCTTTGTATCTAACTA	3094	False	NA	-57	True	AATAAA	-4	NA	91067230	91041947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91065297_91067034
ENSMUST00000111378.10	chr14	-	795	11	FSM	ENSMUSG00000079197.11	ENSMUST00000111378.10	795	11	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_10	298.855818079555	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCTGTGTTGTTCATTG	NA	False	NA	NA	False	AATAAA	-20	NA	55828558	55824898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828478
ENSMUST00000111390.8	chr5	-	2367	12	FSM	ENSMUSG00000037936.16	ENSMUST00000111390.8	2367	12	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_1	58.8981471316135	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGGCTTCTGTGACTG	NA	False	NA	-3	True	AATAAA	-19	NA	125418135	125354152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ENSMUST00000111432.10	chr1	+	2163	4	FSM	ENSMUSG00000040713.13	ENSMUST00000111432.10	2163	4	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_1	24.0554914035583	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGGACTGATTTCTG	NA	False	NA	NA	False	ATTAAA	-18	NA	165591314	165602877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_165591708_165597381_165597502_165598200_165598386_165601412
ENSMUST00000111435.9	chr1	-	2285	6	FSM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	0	0	0	0	multi-exon	TRUE	canonical	3	372	junction_2	205.630737002035	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	-1	True	AATACA	-19	NA	165462098	165419808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_165421247_165429318_165429425_165432178_165432312_165433177_165433392_165436006_165436174_165461871
ENSMUST00000111438.2	chr5	+	2737	14	FSM	ENSMUSG00000029389.18	ENSMUST00000111438.2	2737	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	29.7024693651981	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATCATTTTTTTTCTCC	NA	False	NA	5	True	AATAAA	-18	NA	124690976	124707723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704908_124705066_124705897_124706191_124706618
ENSMUST00000111441.10	chr2	+	1419	11	FSM	ENSMUSG00000002102.16	ENSMUST00000111441.10	1419	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	599.044247113684	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTCTTTCTCAGCCT	NA	False	NA	18	True	AATAAA	-19	NA	90884444	90889777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_90884677_90884919_90885004_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ENSMUST00000111446.10	chr2	+	1458	7	FSM	ENSMUSG00000002104.12	ENSMUST00000111446.10	1458	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	21.4683229174728	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCTAGTGATTCTGACC	NA	False	NA	4	True	AATAAA	-12	NA	90865971	90876071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_90866334_90866891_90867231_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
ENSMUST00000111464.8	chr2	+	2343	4	FSM	ENSMUSG00000005505.13	ENSMUST00000111464.8	2343	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	29.2726645334669	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCTGTGTTGACT	2335	False	NA	NA	False	AATAAA	-42	NA	90735083	90740905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_90735157_90736009_90736628_90737888_90737996_90739360
ENSMUST00000111467.4	chr2	+	2281	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_3	644.761587047671	2340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGCTTAGCCTGCTGC	214	False	NA	7	True	NA	NA	NA	90677616	90696984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUST00000111468.10	chr2	+	1066	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111468.10	1066	12	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	628.312668913619	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGTGATTGGTGTCTGC	119	False	NA	48	True	NA	NA	NA	90677521	90695732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_90677730_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUST00000111490.2	chr1	+	1419	2	FSM	ENSMUSG00000041396.14	ENSMUST00000111490.2	1419	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGACTGTTCAATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	163822457	163824812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_163822547_163823482
ENSMUST00000111548.8	chr6	+	1398	3	FSM	ENSMUSG00000039958.18	ENSMUST00000111548.8	1398	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTGGGAAAGAAAATGTT	NA	False	NA	NA	False	NA	NA	NA	149043013	149046630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_149043203_149044103_149044214_149045531
ENSMUST00000111586.8	chr5	-	719	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111586.8	719	6	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	270.536208297522	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTCAGAGAAAAATCTTAA	8965	False	NA	NA	False	ATTAAA	-14	NA	123662196	123654326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_123654516_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUST00000111587.10	chr5	-	1576	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_3	53.1902246658162	2240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTTTTCAGAATTGTT	8922	False	NA	-12	True	AATAAA	-25	NA	123662239	123649767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUST00000111608.8	chr1	+	3714	7	FSM	ENSMUSG00000044835.16	ENSMUST00000111608.8	3714	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.5547308932143	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	NA	False	NA	6	True	NA	NA	NA	160970281	160998068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281
ENSMUST00000111610.12	chr14	-	2847	9	FSM	ENSMUSG00000060373.16	ENSMUST00000111610.12	2847	9	0	0	0	0	multi-exon	FALSE	canonical	3	714	junction_5	1135.23408929612	8093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTTGGTATATACATCA	8725	False	NA	-31	True	AATAAA	-22	NA	52341485	52310833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUST00000111611.8	chr1	-	4072	12	FSM	ENSMUSG00000026705.17	ENSMUST00000111611.8	4072	12	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	12.7525722571391	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTGGATTTTTT	NA	False	NA	3	True	AATAAA	-37	NA	160959081	160915944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_160918082_160921250_160921358_160923098_160923308_160925832_160925967_160926711_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
ENSMUST00000111620.10	chr1	+	1910	5	FSM	ENSMUSG00000026708.17	ENSMUST00000111620.10	1910	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	18.1710621593786	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTTATTTATTCTGTT	NA	False	NA	20	True	AATAAA	-26	NA	160898336	160913908	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477_160911021_160913557
ENSMUST00000111624.8	chr2	+	2556	15	FSM	ENSMUSG00000027075.17	ENSMUST00000111624.8	2556	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	20.7551321413303	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTGGTGTGTATCTGT	307	False	NA	12	True	AATAAA	-14	NA	84670542	84693925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_84670839_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ENSMUST00000111625.2	chr2	+	2487	14	FSM	ENSMUSG00000027075.17	ENSMUST00000111625.2	2487	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	11.2969598465759	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGTGACTGGAGGAGTA	733	False	NA	25	True	AATAAA	-27	NA	84670968	84693938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ENSMUST00000111632.5	chr14	-	2103	15	FSM	ENSMUSG00000004558.16	ENSMUST00000111632.5	2103	15	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_6	11.1385064766607	461	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCATTGTTAATCCGGG	9982	False	NA	-11	True	AATAAA	-16	NA	52150945	52142739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52150779
ENSMUST00000111644.2	chr6	+	2274	14	FSM	ENSMUSG00000001630.14	ENSMUST00000111644.2	2274	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	43.6006622825765	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGATCAGTCAATGGAC	NA	False	NA	11	True	ATTAAA	-21	NA	146626533	146678054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677070
ENSMUST00000111663.9	chr6	+	2880	7	FSM	ENSMUSG00000040242.15	ENSMUST00000111663.9	2880	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	146.964470385041	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTCAGGGTTAATTT	NA	False	NA	29	True	AATAAA	-20	NA	146479356	146500696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146494246_146496673_146496788_146498792
ENSMUST00000111664.8	chr2	-	1926	7	FSM	ENSMUSG00000050043.17	ENSMUST00000111664.8	1926	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_5	582.842865235181	2504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTTGCTGTTTTTCCTT	5229	False	NA	-7	True	AATAAA	-17	NA	84508462	84501659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506440_84506502_84508194
ENSMUST00000111721.2	chr6	+	1336	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111721.2	1336	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	139.5	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAGGAGTCTTTATC	NA	False	NA	14	True	NA	NA	NA	145156911	145162265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_145156971_145160909_145160998_145161076
ENSMUST00000111724.8	chr6	+	1618	4	FSM	ENSMUSG00000040370.14	ENSMUST00000111724.8	1618	4	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_1	142.199390528464	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAGGAGTCTTTATC	NA	False	NA	14	True	NA	NA	NA	145156900	145162265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_145156979_145160247_145160511_145160909_145160998_145161076
ENSMUST00000111726.10	chr6	+	1374	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111726.10	1374	3	0	0	0	0	multi-exon	TRUE	canonical	3	230	junction_1	45.5	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAGGAGTCTTTATC	NA	False	NA	14	True	NA	NA	NA	145156881	145162265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_145156979_145160909_145160998_145161076
ENSMUST00000111754.9	chr1	+	2491	3	FSM	ENSMUSG00000050565.17	ENSMUST00000111754.9	2491	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	87	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCAGGTTTTATTGTT	NA	False	NA	3	True	AATAAA	-15	NA	155911471	155929275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_155911667_155916820_155916881_155927039
ENSMUST00000111770.2	chr5	-	3626	21	FSM	ENSMUSG00000029456.13	ENSMUST00000111770.2	3626	21	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	12.9348366823861	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGTTCTGAGCTAGAT	NA	False	NA	-7	True	NA	NA	NA	121798577	121759090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794277_121798355
ENSMUST00000111783.8	chr5	-	1513	14	FSM	ENSMUSG00000029454.16	ENSMUST00000111783.8	1513	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	58.7492918250155	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTAAAGTTGCTATATA	NA	False	NA	-6	True	AATAAA	-20	NA	121683263	121663110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_121663303_121663725_121663831_121664807_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227
ENSMUST00000111817.8	chr14	-	4171	7	FSM	ENSMUSG00000062014.14	ENSMUST00000111817.8	4171	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	212.21091447478	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTTTTATTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	47059699	47045605	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47059557
ENSMUST00000111818.8	chr2	-	3255	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111818.8	3255	20	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	52.4085273558816	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTCTTTTTTTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	77776697	77726111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
ENSMUST00000111819.8	chr2	-	3090	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111819.8	3090	20	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	57.3448044097962	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTCTTTTTTTCTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	77776527	77726109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77776493
ENSMUST00000111821.9	chr2	-	3388	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111821.9	3388	20	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_19	43.213763581536	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCAGTGAGGTACTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	77776697	77725996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
ENSMUST00000111867.9	chr19	+	1747	12	FSM	ENSMUSG00000025231.18	ENSMUST00000111867.9	1747	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	20.0218888484042	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATGACTGCAGAGTGCCA	NA	False	NA	NA	False	AATAAA	-13	NA	46385356	46474487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
ENSMUST00000111887.10	chr1	+	2783	8	FSM	ENSMUSG00000023150.15	ENSMUST00000111887.10	2783	8	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_7	396.626282743927	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACGTCTGTAGCCTTTTA	NA	False	NA	11	True	ATTAAA	-28	NA	151220259	151232550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917
ENSMUST00000111892.8	chr6	-	1153	6	FSM	ENSMUSG00000030220.14	ENSMUST00000111892.8	1153	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	4.60434577328853	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGAGTTGTCTTATGC	5824	False	NA	NA	False	AATAAA	-20	NA	136918501	136900652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_136901325_136903669_136903734_136906609_136906687_136909257_136909342_136910581_136910772_136918435
ENSMUST00000111908.3	chr14	+	3974	7	FSM	ENSMUSG00000041445.10	ENSMUST00000111908.3	3974	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	15.3260852434302	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTGTTTACTGTTG	4890	False	NA	6	True	AATAAA	-16	NA	34097421	34126244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_34097736_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ENSMUST00000111915.8	chr6	+	4221	13	FSM	ENSMUSG00000030207.16	ENSMUST00000111915.8	4221	13	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_6	10.7558123821495	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTGTCCTTTTCTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	135174974	135213240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_135175100_135186030_135186430_135188832_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
ENSMUST00000111953.2	chr5	-	772	3	FSM	ENSMUSG00000029363.15	ENSMUST00000111953.2	772	3	0	0	0	0	multi-exon	FALSE	canonical	3	1895	junction_2	55	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAATTGTAGTACAGTT	NA	False	NA	NA	False	NA	NA	NA	117527110	117524345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_117524924_117525933_117525999_117526981
ENSMUST00000111957.10	chr1	+	580	4	FSM	ENSMUSG00000018196.19	ENSMUST00000111957.10	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	245.711664806989	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGATTGGCCAGTTTT	NA	False	NA	31	True	AATAAA	-18	NA	143615352	143622514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_143615423_143617385_143617450_143620784_143620962_143622245
ENSMUST00000111960.2	chr6	+	1578	6	FSM	ENSMUSG00000030200.14	ENSMUST00000111960.2	1578	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	10	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGTCTCTAACACTAT	NA	False	NA	5	True	GATAAA	-16	NA	134391390	134415078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_134391599_134400573_134401026_134404258_134404424_134407028_134407100_134409108_134409376_134414663
ENSMUST00000111961.8	chr2	+	1734	10	FSM	ENSMUSG00000059005.14	ENSMUST00000111961.8	1734	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	3663.85558909979	3076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7494	False	NA	NA	False	AAAAAG	-13	NA	75489623	75496465	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75494016_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUST00000111962.8	chr2	+	5150	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	0	0	0	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	20109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTTTTATCATTTTG	7481	False	NA	3	True	ATTAAA	-18	NA	75489610	75499751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUST00000111964.8	chr2	+	1654	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	0	0	0	0	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	6609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAGTTAACACGTGAA	7475	False	NA	NA	False	NA	NA	NA	75489604	75496183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUST00000111973.8	chr5	-	779	5	FSM	ENSMUSG00000032959.13	ENSMUST00000111973.8	779	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1144.02021398225	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTAGGGTGTCTTCCCTC	NA	False	NA	NA	False	NA	NA	NA	117425648	117421203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_117421531_117422128_117422195_117423785_117423887_117424199_117424310_117425473
ENSMUST00000111991.9	chr9	-	3829	22	FSM	ENSMUSG00000032480.18	ENSMUST00000111991.9	3829	22	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_20	148.964330905375	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCTGTCCTCCCAA	NA	False	NA	-3	True	AATAAA	-19	NA	109946479	109913389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944558_109944651_109946425
ENSMUST00000111994.10	chr14	+	3343	10	FSM	ENSMUSG00000056234.16	ENSMUST00000111994.10	3343	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	198.662813783171	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCAGTTGTGTTTGTGTT	NA	False	NA	-2	True	ATTAAA	-13	NA	31887747	31901204	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_31887780_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ENSMUST00000111996.8	chr2	-	723	5	FSM	ENSMUSG00000018770.10	ENSMUST00000111996.8	723	5	0	0	0	0	multi-exon	FALSE	canonical	3	880	junction_4	1495.60896878161	45106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741669	73738790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741585
ENSMUST00000112000.2	chr14	-	486	2	FSM	ENSMUSG00000021905.15	ENSMUST00000112000.2	486	2	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGAAAGGGCAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	31807566	31806652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_31806939_31807366
ENSMUST00000112007.8	chr2	-	4195	14	FSM	ENSMUSG00000027104.19	ENSMUST00000112007.8	4195	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	109.668839867438	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTTTTTAATCTGT	NA	False	NA	1	True	AATAAA	-26	NA	73722975	73646852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
ENSMUST00000112010.9	chr2	-	4037	13	FSM	ENSMUSG00000027104.19	ENSMUST00000112010.9	4037	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_9	68.6093510795398	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTTTTTAATCTGT	NA	False	NA	1	True	AATAAA	-26	NA	73722880	73646852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ENSMUST00000112016.9	chr2	-	3943	12	FSM	ENSMUSG00000027104.19	ENSMUST00000112016.9	3943	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	77.3989343681314	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTTTTTAATCTGT	NA	False	NA	1	True	AATAAA	-26	NA	73722983	73646852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ENSMUST00000112028.10	chr19	-	3136	12	FSM	ENSMUSG00000025198.17	ENSMUST00000112028.10	3136	12	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_11	27.8217466521579	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGTGTTCTATTTTC	NA	False	NA	-2	True	AATAAA	-19	NA	44058224	44023382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058129
ENSMUST00000112047.10	chr19	+	1233	9	FSM	ENSMUSG00000025193.15	ENSMUST00000112047.10	1233	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	5.45435605731786	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGTCTCAGGTTCTTTC	9274	False	NA	16	True	AATAAA	-19	NA	43741536	43757077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_43741660_43744058_43744131_43747166_43747227_43748288_43748499_43749127_43749164_43751311_43751446_43753398_43753427_43755639_43755746_43756613
ENSMUST00000112050.2	chr2	+	1897	4	FSM	ENSMUSG00000008226.15	ENSMUST00000112050.2	1897	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	8.65383665716478	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATTACTTTGGTTGTA	NA	False	NA	NA	False	AATAAA	-36	NA	73142997	73151140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646
ENSMUST00000112053.2	chr9	-	1054	2	FSM	ENSMUSG00000049734.10	ENSMUST00000112053.2	1054	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGACTGCTTGCCGCCTCT	NA	False	NA	-4	True	AATAAA	-13	NA	108888319	108887005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_108887997_108888256
ENSMUST00000112055.8	chr2	-	1251	7	FSM	ENSMUSG00000027108.16	ENSMUST00000112055.8	1251	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	159.690325317472	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTTGGTGTGTTTGGG	NA	False	NA	-5	True	AATAAA	-14	NA	73043304	72923545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_72924069_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203
ENSMUST00000112059.10	chr9	+	1910	6	FSM	ENSMUSG00000025647.17	ENSMUST00000112059.10	1910	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	78.9186923358465	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTACTTCTTGAAC	NA	False	NA	71	True	NA	NA	NA	108867632	108886845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108867833_108869937_108870095_108880431_108880522_108885045_108885162_108885354_108885574_108885717
ENSMUST00000112091.9	chrX	-	1447	3	FSM	ENSMUSG00000079316.11	ENSMUST00000112091.9	1447	3	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_2	7.5	4155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTTGCAATGCTTTTTAA	NA	False	NA	-8	True	ATTAAA	-24	NA	165262863	165240248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_165241340_165245310_165245339_165262535
ENSMUST00000112136.2	chr2	+	2548	18	FSM	ENSMUSG00000027012.16	ENSMUST00000112136.2	2548	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	255.153119100769	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTTTTACTTTTTGA	NA	False	NA	24	True	AATAAA	-26	NA	71042335	71093647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058170_71058189_71058943_71059035_71063992_71064053_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092994
ENSMUST00000112137.2	chrX	-	2316	12	FSM	ENSMUSG00000031358.18	ENSMUST00000112137.2	2316	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	6.17646827325928	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAAGAGGAGTTTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	167456894	167437112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167456723
ENSMUST00000112138.8	chr2	+	2466	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112138.8	2466	16	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	83.3153580613376	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTCTCAAATTTTCACT	NA	False	NA	12	True	AATAAA	-14	NA	71042101	71093635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUST00000112139.8	chr2	+	2483	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112139.8	2483	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_15	151.295501879233	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCAAATTTTCACTTTT	NA	False	NA	15	True	AATAAA	-17	NA	71042084	71093638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092994
ENSMUST00000112140.8	chr2	+	2573	18	FSM	ENSMUSG00000027012.16	ENSMUST00000112140.8	2573	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	243.567104215769	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTTTTACTTTTTGA	NA	False	NA	24	True	AATAAA	-26	NA	71042084	71093647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058170_71058189_71058943_71059035_71063992_71064053_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUST00000112142.8	chr2	+	2585	17	FSM	ENSMUSG00000027012.16	ENSMUST00000112142.8	2585	17	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	197.040565303188	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTTTCACTTTTACTT	NA	False	NA	19	True	AATAAA	-21	NA	71042049	71093642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71063992_71064053_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUST00000112143.4	chr5	+	2181	6	FSM	ENSMUSG00000041827.16	ENSMUST00000112143.4	2181	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	3.38230690505755	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTCCTCATTTGTCAC	7858	False	NA	6	True	NA	NA	NA	115061322	115075974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_115061669_115066081_115066365_115067898_115068063_115070781_115071024_115073979_115074128_115074976
ENSMUST00000112144.9	chr2	+	2565	18	FSM	ENSMUSG00000027012.16	ENSMUST00000112144.9	2565	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	241.288883414706	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAATTTTCACTTTTACT	NA	False	NA	18	True	AATAAA	-20	NA	71042315	71093641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058170_71058189_71058943_71059035_71063992_71064053_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUST00000112151.2	chr6	-	1108	3	FSM	ENSMUSG00000048668.17	ENSMUST00000112151.2	1108	3	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	100.5	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGCAGCCTCGTGCCC	474	False	NA	-12	True	AATAAA	-36	NA	128339831	128334327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_128335157_128336068_128336318_128339801
ENSMUST00000112155.9	chr9	+	3040	10	FSM	ENSMUSG00000006673.15	ENSMUST00000112155.9	3040	10	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	89.886485340754	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGCGCTTTTTTTTTTTT	1170	False	NA	4	True	AGTAAA	-8	NA	108394308	108437191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ENSMUST00000112160.4	chr5	-	1333	2	FSM	ENSMUSG00000072694.9	ENSMUST00000112160.4	1333	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTGCTGTTCTGTGC	719	False	NA	0	True	ATTAAA	-23	NA	114952037	114946256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_114947393_114951840
ENSMUST00000112172.4	chrX	-	768	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112172.4	768	3	0	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_1	25.5	7814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCTGCTTGGTGA	NA	False	NA	0	True	AATAAA	-15	NA	165992311	165990088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_165990532_165990932_165991048_165992101
ENSMUST00000112179.9	chr2	-	2297	9	FSM	ENSMUSG00000041975.18	ENSMUST00000112179.9	2297	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	32.9393381840012	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTGTTGGAGTTTT	NA	False	NA	0	True	NA	NA	NA	70885927	70794904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70812198_70812540_70823827_70823920_70848563_70848719_70885714
ENSMUST00000112186.9	chr2	-	2347	10	FSM	ENSMUSG00000041975.18	ENSMUST00000112186.9	2347	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	14.8332292963476	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTGTTGGAGTTTT	NA	False	NA	0	True	NA	NA	NA	70885927	70794904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563_70848719_70885714
ENSMUST00000112188.8	chrX	-	4050	5	FSM	ENSMUSG00000051224.14	ENSMUST00000112188.8	4050	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	3.35410196624968	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTATTCTCCAATATTT	NA	False	NA	-2	True	AATAAA	-20	NA	165293474	165282807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_165286402_165288701_165288833_165290704_165290743_165291901_165292003_165293288
ENSMUST00000112194.2	chrX	+	1418	5	FSM	ENSMUSG00000079317.11	ENSMUST00000112194.2	1418	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	111.246067346221	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTCATTTGATGCC	NA	False	NA	9	True	AATAAA	-14	NA	165228298	165236136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_165228370_165229786_165229899_165232783_165232929_165233624_165233711_165235132
ENSMUST00000112205.2	chr2	+	1196	9	FSM	ENSMUSG00000014959.13	ENSMUST00000112205.2	1196	9	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_6	27.9463772249642	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGAGGCCTCCCGTTCAGTC	NA	False	NA	9	True	AATAAA	-18	NA	70491933	70519704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526
ENSMUST00000112210.11	chr14	-	2777	18	FSM	ENSMUSG00000021948.18	ENSMUST00000112210.11	2777	18	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_17	15.936508975905	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTGGGGACATTTA	5421	False	NA	-3	True	AATAAA	-17	NA	30348167	30317310	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
ENSMUST00000112211.9	chr14	-	2851	18	FSM	ENSMUSG00000021948.18	ENSMUST00000112211.9	2851	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	28.1631431086409	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGCTGTGGGGACATT	5423	False	NA	-5	True	AATAAA	-15	NA	30348165	30317312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324615_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
ENSMUST00000112221.8	chr6	-	1871	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_4	48.7748334184751	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5265	False	NA	-5	True	AATAAA	-21	NA	126916550	126900377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ENSMUST00000112238.9	chr17	+	5085	6	FSM	ENSMUSG00000034998.19	ENSMUST00000112238.9	5085	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_4	10.9288608738514	318	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGTTATTTGTGAG	NA	False	NA	15	True	AATAAA	-19	NA	88748138	88797961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
ENSMUST00000112248.9	chrX	-	2487	15	FSM	ENSMUSG00000061778.11	ENSMUST00000112248.9	2487	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	17.7207649441011	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTCTCTAATTGATA	NA	False	NA	NA	False	AATAAA	-18	NA	163763371	163719164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_163720081_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
ENSMUST00000112257.10	chrX	+	3212	6	FSM	ENSMUSG00000031381.17	ENSMUST00000112257.10	3212	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	78.77715404862	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTTGTCTCAGTTT	NA	False	NA	23	True	AATAAA	-23	NA	163202782	163216907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_163202837_163205579_163205983_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ENSMUST00000112266.8	chr2	+	2194	4	FSM	ENSMUSG00000027088.11	ENSMUST00000112266.8	2194	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	37.7918274528002	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	26	True	AATAAA	-16	NA	69619993	69627567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_69620249_69620629_69620666_69622680_69622836_69625819
ENSMUST00000112279.2	chr5	-	899	4	FSM	ENSMUSG00000044339.13	ENSMUST00000112279.2	899	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_3	133.312498372141	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTGTATTTGGGGGGGG	7978	False	NA	-11	True	AATAAA	-13	NA	114266279	114261995	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_114262316_114263592_114263792_114265586_114265831_114266143
ENSMUST00000112294.9	chrX	+	3199	5	FSM	ENSMUSG00000031367.16	ENSMUST00000112294.9	3199	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	15.8192920195564	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTCATGTGAATGAC	NA	False	NA	-2	True	AATAAA	-13	NA	162692140	162712542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162709898
ENSMUST00000112315.2	chrX	-	2525	6	FSM	ENSMUSG00000038344.15	ENSMUST00000112315.2	2525	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	64.8382603097893	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTATGTCTCATCTCCA	NA	False	NA	-7	True	AATAAA	-16	NA	161612450	161571913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ENSMUST00000112316.9	chrX	-	3715	11	FSM	ENSMUSG00000038344.15	ENSMUST00000112316.9	3715	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_9	58.6501491899211	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTCTGTGTATTATT	NA	False	NA	NA	False	AGTAAA	-17	NA	161612450	161561914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ENSMUST00000112320.8	chr2	-	1527	7	FSM	ENSMUSG00000005233.17	ENSMUST00000112320.8	1527	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	307.891214554751	2767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	False	NA	-10	True	NA	NA	NA	69036479	69024238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036173
ENSMUST00000112324.2	chr5	-	1102	5	FSM	ENSMUSG00000042216.14	ENSMUST00000112324.2	1102	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	10.6389614154766	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGAGTGGTGTCTGTCC	NA	False	NA	NA	False	ATTAAA	-18	NA	113428453	113421817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192
ENSMUST00000112327.8	chrX	+	1862	12	FSM	ENSMUSG00000031353.14	ENSMUST00000112327.8	1862	12	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	868.427533053443	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGATTGGCTTTGCAGA	NA	False	NA	-32	True	NA	NA	NA	161543416	161561752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552786_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ENSMUST00000112335.4	chr19	-	937	6	FSM	ENSMUSG00000024990.14	ENSMUST00000112335.4	937	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	4.31740662898458	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCCTATGAGTTGAAGA	5209	False	NA	-5	True	ATTAAA	-13	NA	38113276	38105077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_38105358_38106719_38106933_38112476_38112584_38112743_38112881_38112966_38113096_38113205
ENSMUST00000112349.9	chr17	+	1728	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112349.9	1728	14	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_11	233.064406873892	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTTGTTTTTTTTTTT	NA	False	NA	12	True	AATAAA	-17	NA	84013591	84100304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096346_84096472_84099081_84099231_84099970
ENSMUST00000112359.9	chr5	+	3345	14	FSM	ENSMUSG00000042328.14	ENSMUST00000112359.9	3345	14	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	19.6098031274724	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTGATCAGCTAGCA	NA	False	NA	9	True	AATAAA	-15	NA	112490948	112526280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_112491030_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ENSMUST00000112384.10	chr14	+	468	5	FSM	ENSMUSG00000025290.18	ENSMUST00000112384.10	468	5	0	0	0	0	multi-exon	FALSE	canonical	3	5102	junction_4	3158.6347030798	3251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGATTGGATACAGGTA	NA	False	NA	NA	False	NA	NA	NA	24540748	24545500	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545497
ENSMUST00000112386.8	chr1	+	1202	5	FSM	ENSMUSG00000026433.14	ENSMUST00000112386.8	1202	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	6.13901457890434	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCATCTGCGTTGTTC	NA	False	NA	NA	False	NA	NA	NA	131794961	131800477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
ENSMUST00000112390.8	chr6	+	6537	39	FSM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	116.234542355382	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1789	False	NA	14	True	AATAAA	-18	NA	125073124	125107554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ENSMUST00000112392.8	chr6	+	6652	39	FSM	ENSMUSG00000063870.13	ENSMUST00000112392.8	6652	39	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_8	111.644804298587	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTGATCTGGTTCTG	1608	False	NA	8	True	AATAAA	-12	NA	125072943	125107548	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ENSMUST00000112413.8	chr6	+	672	4	FSM	ENSMUSG00000072770.10	ENSMUST00000112413.8	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	6.54896090146283	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACACATAAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125026909	125028460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205
ENSMUST00000112417.9	chr6	+	1487	8	FSM	ENSMUSG00000030330.16	ENSMUST00000112417.9	1487	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	61.5119036099053	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGCGGTGATAGT	7132	False	NA	7	True	AATAAA	-17	NA	125016823	125026228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024280_125024444_125024551_125024864_125024904_125025138_125025201_125025330
ENSMUST00000112426.8	chr5	-	1389	4	FSM	ENSMUSG00000029507.17	ENSMUST00000112426.8	1389	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	242.644229731972	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCCTATTTTCCTTT	NA	False	NA	1	True	ATTAAA	-22	NA	110927833	110921532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110927552
ENSMUST00000112439.9	chr6	-	1328	8	FSM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	503.213915644191	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGTATGCCAGGAGAT	NA	False	NA	-16	True	ATTAAA	-13	NA	124942501	124935375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ENSMUST00000112446.9	chr1	+	2153	15	FSM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_14	169.094301066184	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCTTTGTGTCTTATTT	NA	False	NA	NA	False	AGTAAA	-24	NA	131080917	131099976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131099657
ENSMUST00000112464.8	chrX	+	3366	12	FSM	ENSMUSG00000044150.13	ENSMUST00000112464.8	3366	12	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_9	109.675027103931	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315663	158376077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ENSMUST00000112482.2	chr5	+	747	6	FSM	ENSMUSG00000007080.15	ENSMUST00000112482.2	747	6	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_5	26.0967430918113	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTGTTCTGTTTTGTGC	NA	False	NA	9	True	AATAAA	-15	NA	110434206	110439101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824
ENSMUST00000112484.10	chr6	-	2219	16	FSM	ENSMUSG00000004266.16	ENSMUST00000112484.10	2219	16	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_10	22.1017847444248	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGTGCCCCTTGTATC	8730	False	NA	0	True	AATAAA	-28	NA	124710117	124697669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
ENSMUST00000112487.3	chr17	-	2041	9	FSM	ENSMUSG00000056121.17	ENSMUST00000112487.3	2041	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	124.244718197596	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGAGTCTTGAGTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	78725581	78685313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_78686175_78689036_78689103_78692172_78692249_78694419_78694501_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
ENSMUST00000112505.9	chr5	-	2098	6	FSM	ENSMUSG00000029500.17	ENSMUST00000112505.9	2098	6	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_2	153.77594090104	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGTTTAGAAACCCTTT	NA	False	NA	5	True	AATAAA	-43	NA	110417779	110406995	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_110408304_110413377_110413512_110413605_110413695_110413776_110413903_110414952_110415132_110417517
ENSMUST00000112507.4	chr17	-	2817	8	FSM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	28.1765570527511	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGGAGTTTTCTTTTA	NA	False	NA	-1	True	AATAAA	-22	NA	75858941	75844080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
ENSMUST00000112508.9	chr19	-	2839	11	FSM	ENSMUSG00000024766.16	ENSMUST00000112508.9	2839	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	12.3109707172099	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTTTCTTAAAAGT	NA	False	NA	-1	True	NA	NA	NA	33567708	33532559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_33533880_33534506_33534579_33535664_33535737_33536911_33537056_33556761_33556899_33557864_33557975_33559452_33559652_33560446_33560565_33562269_33562376_33565600_33565744_33567290
ENSMUST00000112519.9	chr5	+	3159	18	FSM	ENSMUSG00000014668.16	ENSMUST00000112519.9	3159	18	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	36.3883322871989	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTGTACTCCTGTG	NA	False	NA	21	True	AATAAA	-21	NA	110283714	110319837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ENSMUST00000112528.8	chr5	+	3158	5	FSM	ENSMUSG00000023284.16	ENSMUST00000112528.8	3158	5	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_1	12.7744862910412	1831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTATTTGTGAAGATGT	1949	False	NA	NA	False	NA	NA	NA	110257957	110277660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112
ENSMUST00000112529.8	chrX	-	3717	11	FSM	ENSMUSG00000071708.12	ENSMUST00000112529.8	3717	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	141.867156170835	2825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCCGTCTCCATTATGC	NA	False	NA	-4	True	AATAAA	-11	NA	156275283	156226850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243413_156244171_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ENSMUST00000112530.8	chr6	-	3051	15	FSM	ENSMUSG00000005069.13	ENSMUST00000112530.8	3051	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	37.2975487513207	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTCCGCTGCTGACGTT	NA	False	NA	-1	True	AATAAA	-44	NA	124391392	124373775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381182_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245
ENSMUST00000112540.8	chr5	+	2081	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	47.4856703531591	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTCATGGTATCTTT	8370	False	NA	22	True	NA	NA	NA	110144386	110158277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
ENSMUST00000112547.8	chr5	-	2001	4	FSM	ENSMUSG00000072762.10	ENSMUST00000112547.8	2001	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	29.0631496343164	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATACAATATGGTAAAGC	7946	False	NA	NA	False	NA	NA	NA	109899463	109883855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_109885666_109886815_109886877_109887064_109887192_109899460
ENSMUST00000112551.4	chrX	-	896	6	FSM	ENSMUSG00000025283.16	ENSMUST00000112551.4	896	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	481.393144944961	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGGCAGAATTCTTGAA	NA	False	NA	NA	False	TTTAAA	-21	NA	153999341	153996310	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_153996664_153996892_153996955_153997028_153997131_153998596_153998681_153998780_153998833_153999098
ENSMUST00000112563.9	chr5	+	3373	14	FSM	ENSMUSG00000033540.19	ENSMUST00000112563.9	3373	14	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_11	7.1294040681437	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCTCCCAAGTCTTC	NA	False	NA	17	True	NA	NA	NA	108816971	108832423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ENSMUST00000112570.2	chr1	+	4511	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_9	104.758039851747	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTGTGTGAACTATT	NA	False	NA	27	True	ATTAAA	-21	NA	127701900	127733669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ENSMUST00000112571.5	chr17	-	622	5	FSM	ENSMUSG00000024067.15	ENSMUST00000112571.5	622	5	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_4	1057.76707620345	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGAACCTTCAGGACCA	NA	False	NA	NA	False	NA	NA	NA	74623403	74606650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038_74623112_74623214
ENSMUST00000112580.8	chr6	+	2011	5	FSM	ENSMUSG00000012396.13	ENSMUST00000112580.8	2011	5	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	1758.10842953442	42640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	18	True	AATAAA	-19	NA	122684523	122691592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_122684568_122684770_122684893_122688496_122688763_122689587_122689675_122690100
ENSMUST00000112581.8	chr6	+	1995	5	FSM	ENSMUSG00000012396.13	ENSMUST00000112581.8	1995	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	1913.25775837967	42484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	18	True	AATAAA	-19	NA	122684447	122691592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_122684476_122684770_122684893_122688496_122688763_122689587_122689675_122690100
ENSMUST00000112598.9	chr14	+	802	3	FSM	ENSMUSG00000012405.17	ENSMUST00000112598.9	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	10327	junction_1	2922.5	8780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAATTCATATCCAA	NA	False	NA	-38	True	AATACA	-8	NA	4199069	4200696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_4199418_4199652_4199790_4200379
ENSMUST00000112617.4	chrX	+	992	6	FSM	ENSMUSG00000025260.11	ENSMUST00000112617.4	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	696.467486678309	6272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGCAGTCTTGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	150784840	150787438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_150784931_150785273_150785439_150786356_150786522_150786618_150786778_150786857_150786967_150787134
ENSMUST00000112621.2	chr1	+	2338	24	FSM	ENSMUSG00000026339.19	ENSMUST00000112621.2	2338	24	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	17.1308761805856	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAGTATTGAGCAACTGC	NA	False	NA	NA	False	AATAAA	-14	NA	121358838	121429317	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389964_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
ENSMUST00000112640.8	chr1	-	2752	5	FSM	ENSMUSG00000026389.17	ENSMUST00000112640.8	2752	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	6.57647321898295	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACAATAGTTAAAATTGT	NA	False	NA	-21	True	NA	NA	NA	120193014	120154152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120192961
ENSMUST00000112644.9	chr1	+	488	6	FSM	ENSMUSG00000026388.16	ENSMUST00000112644.9	488	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	7.2773621594641	250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTGATTTATCTCTA	NA	False	NA	15	True	AATAAA	-16	NA	120048924	120115919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_120048948_120078332_120078478_120088335_120088387_120093864_120093903_120099130_120099213_120115770
ENSMUST00000112669.10	chr14	-	2477	6	FSM	ENSMUSG00000033111.17	ENSMUST00000112669.10	2477	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	65.4785461048121	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAGGTGTTTAAAGG	NA	False	NA	NA	False	AATAAA	-19	NA	10185554	10166531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_10168616_10169980_10170042_10172106_10172182_10182369_10182494_10184294_10184379_10185505
ENSMUST00000112685.8	chrX	+	3240	18	FSM	ENSMUSG00000025265.15	ENSMUST00000112685.8	3240	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	101.75447075357	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGAGCACTGCTATGG	NA	False	NA	20	True	AATACA	-23	NA	149829145	149872517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_149829197_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ENSMUST00000112691.9	chrX	-	4869	16	FSM	ENSMUSG00000025266.12	ENSMUST00000112691.9	4869	16	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_8	38.4461528201024	1115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGAGACTGTTTTCA	NA	False	NA	-16	True	NA	NA	NA	149800318	149766136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ENSMUST00000112699.9	chrX	-	2183	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112699.9	2183	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_12	47.4332864839309	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTCAAAGTTTCCATCTG	NA	False	NA	51	True	TTTAAA	-5	NA	149597341	149589365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149597224
ENSMUST00000112700.8	chrX	-	2107	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_12	38.0929965858409	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149596703	149589416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596611
ENSMUST00000112721.10	chrX	-	1852	6	FSM	ENSMUSG00000025269.17	ENSMUST00000112721.10	1852	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	32.5662401882686	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATGTTGAGTGGATAT	NA	False	NA	-4	True	AATAAA	-21	NA	149371092	149354503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369063_149370038_149370123_149370918
ENSMUST00000112740.2	chrX	+	2026	7	FSM	ENSMUSG00000095082.2	ENSMUST00000112740.2	2026	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	4.07226390762354	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	148724650	148767978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_148724743_148744867_148744994_148745713_148745794_148749452_148750412_148759566_148759649_148760454_148760505_148767341
ENSMUST00000112747.2	chr5	+	1507	6	FSM	ENSMUSG00000029304.15	ENSMUST00000112747.2	1507	6	0	0	0	0	multi-exon	FALSE	canonical	3	5474	junction_2	333.11595578717	13948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAAGGAGTCTGGTGGT	NA	False	NA	24	True	AATAAA	-11	NA	104584057	104588909	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUST00000112748.8	chr5	+	1456	7	FSM	ENSMUSG00000029304.15	ENSMUST00000112748.8	1456	7	0	0	0	0	multi-exon	FALSE	canonical	3	593	junction_1	2050.93187491822	14938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGTCTGGTGGTGTCA	NA	False	NA	28	True	AATAAA	-15	NA	104582986	104588913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_104583115_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUST00000112753.4	chrX	+	1950	7	FSM	ENSMUSG00000096834.8	ENSMUST00000112753.4	1950	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.13160143944688	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	147454286	147486845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_147454303_147463739_147463866_147464585_147464666_147468313_147469273_147478430_147478513_147479317_147479368_147486208
ENSMUST00000112796.2	chrX	+	2028	7	FSM	ENSMUSG00000072930.4	ENSMUST00000112796.2	2028	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	7.43303437365925	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTGTTTGTGTGTGTG	1209	False	NA	NA	False	AATAAA	-19	NA	146963719	147007706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_146963812_146980956_146981083_146981801_146981882_146985542_146986502_146999377_146999460_147000265_147000316_147007067
ENSMUST00000112844.10	chr1	+	2046	8	FSM	ENSMUSG00000026333.15	ENSMUST00000112844.10	2046	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	7.99744857273052	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGAAACTTTATCTGTGA	NA	False	NA	NA	False	AATAAA	-26	NA	97697896	97720694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_97697981_97703171_97703318_97705050_97705245_97710651_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
ENSMUST00000112862.7	chr2	+	1339	4	FSM	ENSMUSG00000026755.15	ENSMUST00000112862.7	1339	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	449.53704580997	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGGCTTCAAAAGTCATC	NA	False	NA	8	True	AATAAA	-19	NA	38898087	38905889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_38898357_38903126_38903200_38903734_38903912_38905069
ENSMUST00000112890.3	chr1	-	1055	2	FSM	ENSMUSG00000026281.16	ENSMUST00000112890.3	1055	2	0	0	0	0	multi-exon	FALSE	canonical	3	2511	junction_1	0	5784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCCGGCTTGTTTTGTTT	2338	False	NA	NA	False	NA	NA	NA	93729628	93727786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_93728633_93729419
ENSMUST00000112898.8	chr5	+	460	5	FSM	ENSMUSG00000016833.15	ENSMUST00000112898.8	460	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	755.69086768334	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAACTAATTTGAGTGGA	NA	False	NA	41	True	AATAAA	-23	NA	100946602	100952327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100951835_100951896_100952197
ENSMUST00000112914.8	chrX	+	2484	4	FSM	ENSMUSG00000042271.14	ENSMUST00000112914.8	2484	4	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_3	9.93310961716756	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCAAGTCTTTCTTA	NA	False	NA	11	True	AATAAA	-22	NA	141011172	141022688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_141011378_141012519_141012607_141019779_141019925_141020641
ENSMUST00000112916.9	chrX	+	2532	5	FSM	ENSMUSG00000042271.14	ENSMUST00000112916.9	2532	5	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	39.4865483424419	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCAAGTCTTTCTTA	NA	False	NA	11	True	AATAAA	-22	NA	141009765	141022688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_141009928_141011286_141011378_141012519_141012607_141019779_141019925_141020641
ENSMUST00000112920.2	chr2	+	4847	26	FSM	ENSMUSG00000035437.16	ENSMUST00000112920.2	4847	26	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	33.7498088883478	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTTATGTTTGCATAT	NA	False	NA	24	True	ATTAAA	-35	NA	37342278	37456466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ENSMUST00000112978.2	chrX	-	1390	5	FSM	ENSMUSG00000031429.15	ENSMUST00000112978.2	1390	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	228.562218006389	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCCCAATTTCTCATTC	NA	False	NA	-8	True	AATAAA	-11	NA	139857477	139849177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_139850059_139852974_139853063_139853153_139853301_139854548_139854648_139857302
ENSMUST00000112995.3	chrX	-	1790	3	FSM	ENSMUSG00000031431.14	ENSMUST00000112995.3	1790	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	112.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	AATAAA	-26	NA	139443417	139440276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_139441857_139442853_139442906_139443259
ENSMUST00000113035.8	chr17	+	3402	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113035.8	3402	17	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_6	590.514232338011	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1412	False	NA	36	True	AATAAA	-20	NA	56611312	56630486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUST00000113038.8	chr17	+	3483	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113038.8	3483	17	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_6	505.023262923353	2476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	499	False	NA	36	True	AATAAA	-20	NA	56610399	56630486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUST00000113039.9	chr17	+	3391	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_1	450.210766613816	2514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1447	False	NA	36	True	AATAAA	-20	NA	56611347	56630486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUST00000113067.8	chrX	+	2259	4	FSM	ENSMUSG00000031428.12	ENSMUST00000113067.8	2259	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.816496580927726	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGCAGGGGTGTTCTATT	7901	False	NA	7	True	AATAAA	-23	NA	135893903	135897127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_135894102_135894455_135894511_135894679_135894820_135895261
ENSMUST00000113071.2	chrX	-	439	3	FSM	ENSMUSG00000089768.3	ENSMUST00000113071.2	439	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	50	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTAACTTCCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	135877623	135874770	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135874989_135876146_135876252_135877507
ENSMUST00000113078.8	chr2	-	1872	6	FSM	ENSMUSG00000035949.16	ENSMUST00000113078.8	1872	6	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_4	77.1403914949879	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTTCTTTGAAATTG	NA	False	NA	-3	True	ATTAAA	-15	NA	34713193	34695349	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569
ENSMUST00000113092.9	chr6	-	1269	9	FSM	ENSMUSG00000051169.15	ENSMUST00000113092.9	1269	9	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_2	15.858258889298	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTACCAAGGACTGTG	NA	False	NA	-8	True	AATAAA	-42	NA	113396301	113392279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
ENSMUST00000113097.8	chrX	-	1825	4	FSM	ENSMUSG00000031422.17	ENSMUST00000113097.8	1825	4	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_3	1449.75867723639	8105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135644439	135633690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135644341
ENSMUST00000113102.10	chr5	-	2414	11	FSM	ENSMUSG00000029413.15	ENSMUST00000113102.10	2414	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	5.44885309033011	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTCTGAGTGTCCTAC	9198	False	NA	-1	True	NA	NA	NA	92426029	92405517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92406803_92407412_92407491_92409210_92409240_92410367_92410435_92411268_92411332_92411449_92411623_92412939_92413017_92415900_92415992_92420302_92420430_92424777_92424943_92425770
ENSMUST00000113110.5	chr9	-	801	3	FSM	ENSMUSG00000079427.11	ENSMUST00000113110.5	801	3	0	0	0	0	multi-exon	TRUE	canonical	3	319	junction_2	104	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATCAATAGAAATTATT	NA	False	NA	NA	False	AATAAA	-20	NA	88601866	88570654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88571039_88597540_88597803_88601711
ENSMUST00000113112.2	chrX	+	826	3	FSM	ENSMUSG00000046432.13	ENSMUST00000113112.2	826	3	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_2	2270	9514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGCCACAAGAACTCTGA	NA	False	NA	NA	False	AATAAA	-18	NA	135171053	135172713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_135171151_135171558_135171632_135172057
ENSMUST00000113113.2	chrX	+	766	2	FSM	ENSMUSG00000046432.13	ENSMUST00000113113.2	766	2	0	0	0	0	multi-exon	FALSE	canonical	3	4289	junction_1	0	6775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTGTCCTTAAAGCAT	NA	False	NA	NA	False	AATAAA	-16	NA	135171523	135172669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_135171632_135172011
ENSMUST00000113115.2	chrX	+	888	2	FSM	ENSMUSG00000042712.11	ENSMUST00000113115.2	888	2	0	0	0	0	multi-exon	FALSE	canonical	3	2732	junction_1	0	5375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAACAGCCCATCAATTTA	NA	False	NA	8	True	AATAAA	-24	NA	135146431	135147888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_135146516_135147084
ENSMUST00000113116.3	chrX	+	971	3	FSM	ENSMUSG00000079428.9	ENSMUST00000113116.3	971	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGACTTGATCATTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	135124789	135126849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_135124841_135125650_135125722_135126000
ENSMUST00000113120.2	chrX	-	718	2	FSM	ENSMUSG00000050071.9	ENSMUST00000113120.2	718	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	4658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTGTACTCATCTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	135116192	135114721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135115333_135116085
ENSMUST00000113127.7	chr5	-	4182	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	0	0	0	0	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	1887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATCTATGTCCCTA	NA	False	NA	-18	True	AATAAA	-15	NA	92231578	92200022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ENSMUST00000113136.8	chrX	+	3736	7	FSM	ENSMUSG00000072966.12	ENSMUST00000113136.8	3736	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	54.6669207311169	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGACCCTTCTTCACT	NA	False	NA	NA	False	AATAAA	-20	NA	134739804	134745475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_134739998_134740531_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
ENSMUST00000113144.8	chrX	+	5843	11	FSM	ENSMUSG00000043384.16	ENSMUST00000113144.8	5843	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	58.361288539579	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCCCTTCACTGTAAAAT	NA	False	NA	18	True	AATAAA	-25	NA	134643481	134704223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_134643728_134645247_134645325_134649404_134649532_134652693_134652767_134696890_134697086_134697697_134697787_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ENSMUST00000113154.8	chrX	-	544	5	FSM	ENSMUSG00000060726.11	ENSMUST00000113154.8	544	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	4.9180788932265	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGCTTGTTTTTGTAA	NA	False	NA	NA	False	AATAAA	-26	NA	134626010	134619415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_134619503_134620414_134620520_134621315_134621402_134624106_134624186_134625823
ENSMUST00000113176.3	chrX	+	3673	5	FSM	ENSMUSG00000067360.13	ENSMUST00000113176.3	3673	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	43.9964487203229	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTACTATAATTTAAGT	NA	False	NA	NA	False	NA	NA	NA	134203064	134213385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_134203188_134203385_134203513_134208081_134208382_134209685_134210271_134210847
ENSMUST00000113183.2	chrX	-	3698	5	FSM	ENSMUSG00000079432.2	ENSMUST00000113183.2	3698	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	56.4933624419719	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCATGAGATTCATTTA	NA	False	NA	NA	False	AGTAAA	-16	NA	134078381	134068372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_134070935_134071511_134072097_134073399_134073700_134077932_134078052_134078249
ENSMUST00000113186.8	chr1	+	3004	17	FSM	ENSMUSG00000026289.16	ENSMUST00000113186.8	3004	17	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_8	19.4867743610891	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGCGTCTTGATT	7308	False	NA	17	True	AATAAA	-26	NA	87683797	87720144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ENSMUST00000113189.8	chrX	-	2375	22	FSM	ENSMUSG00000009941.11	ENSMUST00000113189.8	2375	22	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	7.21770310384392	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATGTCTTGAAGTGCT	NA	False	NA	-2	True	AATAAA	-18	NA	133865503	133845276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_133845538_133845640_133845702_133850435_133850616_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133856087_133856257_133856366_133856471_133856561_133856713_133856784_133856913_133856995_133857111_133857217_133857340_133857425_133857798_133857953_133858216_133858320_133862672_133862768_133865376
ENSMUST00000113193.9	chrX	-	3666	6	FSM	ENSMUSG00000033436.14	ENSMUST00000113193.9	3666	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	6.60302960768767	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTGTTCTGGTGCTT	NA	False	NA	-3	True	AATAAA	-19	NA	133709970	133704895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_133707763_133708010_133708077_133708202_133708263_133708369_133708475_133708983_133709249_133709667
ENSMUST00000113197.2	chrX	+	2179	5	FSM	ENSMUSG00000033460.15	ENSMUST00000113197.2	2179	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	75.7310207246674	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618768	133622666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133618800_133619118_133619211_133619668_133619742_133620375_133620475_133620782
ENSMUST00000113198.8	chrX	+	2085	4	FSM	ENSMUSG00000033460.15	ENSMUST00000113198.8	2085	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	26.0895892391327	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAAGCACTGTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	133618761	133622657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133618800_133619668_133619742_133620375_133620475_133620782
ENSMUST00000113199.8	chrX	+	2413	6	FSM	ENSMUSG00000033460.15	ENSMUST00000113199.8	2413	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	37.1020215082683	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCACTGTCTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	133618736	133622659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133618800_133619118_133619211_133619474_133619568_133619668_133619858_133620375_133620475_133620782
ENSMUST00000113200.8	chr2	-	4030	26	FSM	ENSMUSG00000026792.17	ENSMUST00000113200.8	4030	26	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_16	3.74165738677394	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTACACAGTTTGCATAGA	NA	False	NA	-5	True	AATAAA	-21	NA	32851626	32815231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055_32851268_32851573
ENSMUST00000113201.8	chrX	+	2228	5	FSM	ENSMUSG00000033460.15	ENSMUST00000113201.8	2228	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	55.9955355363265	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAAGCACTGTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	133618711	133622657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133618800_133619474_133619568_133619668_133619742_133620375_133620475_133620782
ENSMUST00000113203.2	chrX	+	2315	2	FSM	ENSMUSG00000045427.14	ENSMUST00000113203.2	2315	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	133501973	133507809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133502083_133505603
ENSMUST00000113211.8	chrX	+	483	5	FSM	ENSMUSG00000079435.10	ENSMUST00000113211.8	483	5	0	0	0	0	multi-exon	FALSE	canonical	3	10431	junction_4	1336.12412877696	152857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTTTTTCTCCTGTT	NA	False	NA	75	True	ATTAAA	-16	NA	133486402	133488805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133486469_133486826_133486933_133487259_133487328_133488199_133488323_133488685
ENSMUST00000113215.10	chr9	+	4565	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTTATTTTTCCTTC	NA	False	NA	9	True	AATAAA	-16	NA	83430380	83483399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
ENSMUST00000113231.4	chr1	+	1119	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	0	0	0	0	multi-exon	FALSE	canonical	3	1076	junction_1	458.210801802935	6833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCATGCTCTTGCTC	NA	False	NA	15	True	AATAAA	-15	NA	87142007	87155786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ENSMUST00000113232.8	chr1	+	1125	6	FSM	ENSMUSG00000026254.18	ENSMUST00000113232.8	1125	6	0	0	0	0	multi-exon	FALSE	canonical	3	965	junction_1	545.938677875089	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCACCTTTGCATGTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	87141635	87154329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818
ENSMUST00000113233.8	chr1	+	1807	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113233.8	1807	7	0	0	0	0	multi-exon	FALSE	canonical	3	965	junction_1	498.771713534581	3964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGGGTTGTCTGAATG	NA	False	NA	NA	False	ATTAAA	-14	NA	87141635	87156578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ENSMUST00000113235.8	chr1	+	3473	8	FSM	ENSMUSG00000026254.18	ENSMUST00000113235.8	3473	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	1022.13094732005	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGAGTCTCCTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	87141635	87168210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87160124_87160204_87165567
ENSMUST00000113239.10	chr6	-	2084	11	FSM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	22.0871003076456	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCTCCTTAATGTCATT	NA	False	NA	-33	True	AATAAA	-17	NA	106777035	106757161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
ENSMUST00000113248.4	chr6	+	1398	9	FSM	ENSMUSG00000013736.17	ENSMUST00000113248.4	1398	9	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	232.818296907696	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAAAACTAAATGAAGAGT	NA	False	NA	NA	False	NA	NA	NA	106746126	106758615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_106746153_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ENSMUST00000113277.8	chr2	+	2063	7	FSM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	98.788775790685	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAGTGAGTGTATTGA	NA	False	NA	13	True	AATAAA	-17	NA	32515448	32525066	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_32515551_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUST00000113278.9	chr2	+	2085	7	FSM	ENSMUSG00000026817.15	ENSMUST00000113278.9	2085	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	112.542831352729	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	False	NA	17	True	AATAAA	-21	NA	32511769	32525070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_32511890_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUST00000113286.8	chrX	+	2717	11	FSM	ENSMUSG00000031256.12	ENSMUST00000113286.8	2717	11	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_8	82.5556781814552	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGTTTTGCTTTTTAA	NA	False	NA	4	True	AATAAA	-19	NA	132959963	132976612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
ENSMUST00000113287.8	chrX	+	3661	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTCATGATCTGCCTTTA	NA	False	NA	NA	False	AATACA	-13	NA	132959935	132986795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ENSMUST00000113301.2	chr17	-	594	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113301.2	594	3	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	2129.5	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTATTTTATTCTTTT	NA	False	NA	-12	True	AATAAA	-15	NA	47998993	47997664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47997988_47998112_47998214_47998823
ENSMUST00000113306.4	chr1	+	2582	2	FSM	ENSMUSG00000079445.4	ENSMUST00000113306.4	2582	2	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	0	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGCTTCCTTGGTCTT	NA	False	NA	36	True	AATAAA	-27	NA	86230955	86235027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_86231277_86232766
ENSMUST00000113331.8	chr2	+	2604	15	FSM	ENSMUSG00000039205.17	ENSMUST00000113331.8	2604	15	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	14.676789950984	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCACCAGCACTGTGTC	NA	False	NA	12	True	AATAAA	-23	NA	32253816	32268315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ENSMUST00000113338.9	chr2	+	2666	16	FSM	ENSMUSG00000039205.17	ENSMUST00000113338.9	2666	16	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	18.8985596158955	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTCCCCACCAGCACT	NA	False	NA	7	True	AATAAA	-18	NA	32253821	32268310	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ENSMUST00000113369.3	chr19	+	2013	11	FSM	ENSMUSG00000024968.15	ENSMUST00000113369.3	2013	11	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_10	67.7507195533745	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCTTCCATGTGTGCT	NA	False	NA	21	True	AATAAA	-16	NA	7247128	7252589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ENSMUST00000113397.9	chr2	-	580	4	FSM	ENSMUSG00000044627.12	ENSMUST00000113397.9	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	1606.82426612938	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178017	32168827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_32169144_32170720_32170816_32177608_32177658_32177897
ENSMUST00000113400.3	chr2	-	522	5	FSM	ENSMUSG00000044627.12	ENSMUST00000113400.3	522	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	1473.86522026269	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATTGGGAGGGGTGGGT	NA	False	NA	-114	True	NA	NA	NA	32178081	32168929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32178042
ENSMUST00000113423.10	chr19	+	990	4	FSM	ENSMUSG00000024959.15	ENSMUST00000113423.10	990	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	15.9234278833282	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	9321	False	NA	10	True	AATAAA	-15	NA	6919868	6929261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6919993_6920234_6920415_6928007_6928199_6928766
ENSMUST00000113428.9	chrX	-	4135	23	FSM	ENSMUSG00000025665.17	ENSMUST00000113428.9	4135	23	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	54.455987232393	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTAGTCTTGGTGTAG	NA	False	NA	-7	True	ATTAAA	-30	NA	110372892	110297889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ENSMUST00000113429.8	chr17	+	998	7	FSM	ENSMUSG00000002767.14	ENSMUST00000113429.8	998	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	389.469903273097	4139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTACTACCTTTTCAC	NA	False	NA	27	True	AATAAA	-16	NA	46957175	46961057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959595_46959696_46959960_46960035_46960809
ENSMUST00000113430.2	chr17	+	991	7	FSM	ENSMUSG00000002767.14	ENSMUST00000113430.2	991	7	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_1	404.985047734961	2773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTTTCACTTGGGAGG	NA	False	NA	35	True	AATAAA	-24	NA	46957195	46961065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46957325_46958321_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960035_46960809
ENSMUST00000113453.9	chr5	-	1113	3	FSM	ENSMUSG00000059325.15	ENSMUST00000113453.9	1113	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	1.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGAGTCTTTTTTTTT	3143	False	NA	-3	True	ATTAAA	-20	NA	77243124	77234834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_77235664_77242712_77242870_77242997
ENSMUST00000113469.3	chr19	+	439	4	FSM	ENSMUSG00000032946.17	ENSMUST00000113469.3	439	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	115.022703073012	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGGGTCATGTCACT	NA	False	NA	14	True	NA	NA	NA	6451747	6453668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6451894_6452581_6452605_6453053_6453117_6453461
ENSMUST00000113471.3	chr19	+	535	4	FSM	ENSMUSG00000032946.17	ENSMUST00000113471.3	535	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	116.70761186258	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGGGTCATGTCACT	NA	False	NA	14	True	NA	NA	NA	6451731	6453668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6451894_6452501_6452605_6453053_6453117_6453461
ENSMUST00000113482.8	chr2	+	3268	19	FSM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	0	0	0	0	multi-exon	TRUE	canonical	3	465	junction_18	67.3624112131124	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTTGTTTGCTGGCC	493	False	NA	36	True	AATAAA	-37	NA	31462662	31507538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ENSMUST00000113485.9	chr19	+	3221	12	FSM	ENSMUSG00000024949.18	ENSMUST00000113485.9	3221	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	431.203485933256	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTTTCTTTTCTTTTAA	834	False	NA	21	True	AATAAA	-21	NA	6413951	6427232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6414149_6415693_6415823_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6425687
ENSMUST00000113487.8	chr19	+	2649	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113487.8	2649	13	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_12	242.538814190407	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	834	False	NA	15	True	AATAAA	-15	NA	6413951	6427226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
ENSMUST00000113489.8	chr19	+	2863	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113489.8	2863	13	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_10	368.940026366828	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	631	False	NA	22	True	AATAAA	-22	NA	6413748	6427233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6426325
ENSMUST00000113504.10	chr19	+	2663	10	FSM	ENSMUSG00000024947.18	ENSMUST00000113504.10	2663	10	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_1	106.997403914508	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGTATGTATGTGTTTC	554	False	NA	23	True	GATAAA	-23	NA	6385008	6390921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6385101_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ENSMUST00000113514.8	chr1	-	4551	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113514.8	4551	12	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_7	61.8239302140153	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTAATTTTGTTTGCT	NA	False	NA	0	True	AATAAA	-23	NA	79739486	79679978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79694919_79695033_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ENSMUST00000113535.9	chr5	+	1969	16	FSM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_11	150.805393360671	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAAAAGCTTTGTCTTGT	NA	False	NA	22	True	AATAAA	-23	NA	74696141	74756806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUST00000113543.9	chr19	-	1498	10	FSM	ENSMUSG00000024799.17	ENSMUST00000113543.9	1498	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	72.9870612582197	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTTCTTCTATC	9961	False	NA	-1	True	AATAAA	-14	NA	6117872	6112851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6113132_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
ENSMUST00000113550.6	chr6	-	1042	7	FSM	ENSMUSG00000030086.17	ENSMUST00000113550.6	1042	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	87.7648373021147	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCACTTCTGTTGAC	NA	False	NA	0	True	AATAAA	-37	NA	89572634	89360127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89544568_89544714_89546324_89546395_89551349_89551573_89572440
ENSMUST00000113552.9	chr2	-	1910	9	FSM	ENSMUSG00000075415.14	ENSMUST00000113552.9	1910	9	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_4	13.559475469206	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTTTTGTGTCTTCTT	4837	False	NA	-13	True	NA	NA	NA	31031951	30943246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ENSMUST00000113558.8	chr5	+	4023	10	FSM	ENSMUSG00000051674.16	ENSMUST00000113558.8	4023	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	47.4083911934961	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGGGTCTTTGTACTC	NA	False	NA	19	True	AATAAA	-30	NA	73648367	73718137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73714596_73714700_73714974
ENSMUST00000113562.9	chr2	-	4515	15	FSM	ENSMUSG00000075415.14	ENSMUST00000113562.9	4515	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	43.3373101262595	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGTTCTCTGTTGTAT	4780	False	NA	-7	True	AATAAA	-16	NA	31032008	30916219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ENSMUST00000113584.8	chr1	+	1692	14	FSM	ENSMUSG00000033021.17	ENSMUST00000113584.8	1692	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	88.7478310427522	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412586	75419817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_75412656_75412789_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ENSMUST00000113598.8	chr6	-	2031	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113598.8	2031	6	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	727.359718433733	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGAACAGCTGCTGTC	NA	False	NA	NA	False	AATAAA	-11	NA	88021999	87976098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88021918
ENSMUST00000113600.10	chr6	-	2159	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113600.10	2159	6	0	0	0	0	multi-exon	FALSE	canonical	3	1571	junction_1	157.281403859452	3377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTGTCTTTTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	88022252	87976087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
ENSMUST00000113605.10	chr1	-	1571	15	FSM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_14	185.094639334056	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75293589	75285208	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293534
ENSMUST00000113610.3	chrX	-	420	3	FSM	ENSMUSG00000079479.3	ENSMUST00000113610.3	420	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGACTTCGTGAAAATT	NA	False	NA	NA	False	AATAAA	-22	NA	101751241	101750495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_101750648_101750793_101750958_101751137
ENSMUST00000113617.3	chr6	-	952	6	FSM	ENSMUSG00000030057.16	ENSMUST00000113617.3	952	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	4719.63282470151	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATTTCTGCATTTAACTA	NA	False	NA	-47	True	NA	NA	NA	87828042	87820868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87825996_87826092_87827885
ENSMUST00000113619.8	chr6	-	1661	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	0	0	0	0	multi-exon	FALSE	canonical	3	2802	junction_3	3497.63613030286	16463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828062	87820063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
ENSMUST00000113621.10	chr2	-	1851	13	FSM	ENSMUSG00000026860.17	ENSMUST00000113621.10	1851	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	147.537824716993	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249344	30234822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30235440_30235710_30235952_30236070_30236086_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30239237_30239250_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUST00000113627.4	chrX	+	489	4	FSM	ENSMUSG00000079480.4	ENSMUST00000113627.4	489	4	0	0	0	0	multi-exon	FALSE	canonical	3	1046	junction_3	75.7495874576225	8956	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTTTTCTATTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	101163052	101171275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_101163171_101165273_101165348_101170622_101170743_101171098
ENSMUST00000113641.4	chr19	-	2154	14	FSM	ENSMUSG00000024926.11	ENSMUST00000113641.4	2154	14	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_10	96.4922046702747	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATCAGGAGTTCTTACCA	3440	False	NA	-3	True	AATAAA	-18	NA	5660265	5653041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ENSMUST00000113643.8	chr2	+	1195	10	FSM	ENSMUSG00000079484.13	ENSMUST00000113643.8	1195	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	23.0029520381436	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAAATATATTTTATATG	NA	False	NA	NA	False	AATAAA	-6	NA	30156860	30172149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
ENSMUST00000113645.8	chr2	+	1325	12	FSM	ENSMUSG00000079484.13	ENSMUST00000113645.8	1325	12	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	18.5338644710542	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATATGTACGGGTACTT	9917	False	NA	NA	False	AATAAA	-17	NA	30156732	30172160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30156803_30156874_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
ENSMUST00000113662.8	chr2	-	1850	13	FSM	ENSMUSG00000039648.15	ENSMUST00000113662.8	1850	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_12	43.4421710118431	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	False	NA	-5	True	AATAAA	-23	NA	30095787	30075137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084173_30095644
ENSMUST00000113663.9	chr2	-	2026	14	FSM	ENSMUSG00000039648.15	ENSMUST00000113663.9	2026	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	49.789616559678	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCAAGGCAGCTTCTCTC	NA	False	NA	-10	True	AATAAA	-18	NA	30095813	30075142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30087968_30088172_30095644
ENSMUST00000113669.9	chr17	-	742	4	FSM	ENSMUSG00000036315.14	ENSMUST00000113669.9	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_1	61.9157133170212	3834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGATGTTATGTGTGTT	NA	False	NA	-11	True	ACTAAA	-17	NA	37269374	37265247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040
ENSMUST00000113682.9	chr15	+	1480	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_2	12.1620995994387	1934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCTAGGAGTACATAAC	5927	False	NA	NA	False	AATAGA	-3	NA	102240143	102246574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ENSMUST00000113685.10	chr9	-	1208	10	FSM	ENSMUSG00000032366.16	ENSMUST00000113685.10	1208	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	231.53598765688	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGGTACTTTTTTATT	NA	False	NA	1	True	AATAAA	-22	NA	66956495	66935173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUST00000113686.8	chr9	-	998	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113686.8	998	8	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	241.339544025019	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATTCTTTTACTCCTTA	NA	False	NA	-8	True	AATAAA	-21	NA	66951123	66935247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_66935450_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ENSMUST00000113695.8	chr9	-	1607	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	182.146722648058	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTGGTCCTGTCGTC	NA	False	NA	-2	True	AATAAA	-24	NA	66951084	66929873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ENSMUST00000113696.8	chr9	-	1714	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113696.8	1714	8	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	100.853500541273	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGTCCTGTCGTCTG	NA	False	NA	0	True	AATAAA	-26	NA	66951189	66929871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ENSMUST00000113697.8	chr9	-	1742	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113697.8	1742	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	230.863460729497	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCACATTTAGGACATTTT	NA	False	NA	-25	True	AATAAA	-1	NA	66956557	66929896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUST00000113700.8	chr6	+	2523	10	FSM	ENSMUSG00000046679.17	ENSMUST00000113700.8	2523	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.97156450941537	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCATTGATGTCATGA	1771	False	NA	NA	False	AATAAA	-26	NA	86415673	86447370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_86415777_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ENSMUST00000113704.10	chr17	-	1465	5	FSM	ENSMUSG00000045409.17	ENSMUST00000113704.10	1465	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	19.421315609402	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCATTGTGTTTGTCAT	NA	False	NA	0	True	ATTAAA	-20	NA	36582275	36573496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36574130_36574620_36574852_36578016_36578113_36579500_36579959_36582228
ENSMUST00000113707.9	chr9	-	1898	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113707.9	1898	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	239.532846129711	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGTCCTGTCGTCTG	NA	False	NA	0	True	AATAAA	-26	NA	66956688	66929871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUST00000113711.3	chr2	-	1814	9	FSM	ENSMUSG00000039715.9	ENSMUST00000113711.3	1814	9	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	11.9973955507018	1352	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGAGCCCCAAGGAGCA	NA	False	NA	0	True	NA	NA	NA	29938893	29921557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
ENSMUST00000113712.10	chr6	+	4326	13	FSM	ENSMUSG00000071337.12	ENSMUST00000113712.10	4326	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	49.8522817933141	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGGTCTAGTGACCT	9787	False	NA	NA	False	NA	NA	NA	86381306	86410209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ENSMUST00000113713.9	chr6	+	3108	12	FSM	ENSMUSG00000071337.12	ENSMUST00000113713.9	3108	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	63.608175575157	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTCTTTGTAAACTT	9798	False	NA	17	True	AATAAA	-19	NA	86381317	86409162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_86381505_86390785_86390889_86393284_86393384_86395859_86395915_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ENSMUST00000113718.8	chrX	-	3278	30	FSM	ENSMUSG00000009670.12	ENSMUST00000113718.8	3278	30	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	15.4932381399703	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCATTGATCAGCTGATT	NA	False	NA	-5	True	AATAAA	-16	NA	100103273	99882253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_99882667_99883306_99883472_99892654_99892776_99893874_99893984_99895431_99895582_99920141_99920217_99923584_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
ENSMUST00000113721.8	chr1	-	1451	10	FSM	ENSMUSG00000026171.13	ENSMUST00000113721.8	1451	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	27.6463557752974	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGCCTATGTGGTATGA	NA	False	NA	NA	False	AATAAA	-25	NA	74640536	74632911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_74633562_74633718_74633854_74634367_74634458_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
ENSMUST00000113732.2	chr1	+	1679	8	FSM	ENSMUSG00000026172.13	ENSMUST00000113732.2	1679	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	48.4072856719156	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGTACCTACAAGATCTA	1216	False	NA	13	True	AATAAA	-14	NA	74627532	74631348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_74627764_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ENSMUST00000113733.10	chr1	+	1488	8	FSM	ENSMUSG00000026172.13	ENSMUST00000113733.10	1488	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	21.8136822818587	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTTGTGCCTTTCCTC	1131	False	NA	4	True	CATAAA	-16	NA	74627447	74631283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_74627553_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ENSMUST00000113753.8	chr6	+	2222	7	FSM	ENSMUSG00000054226.14	ENSMUST00000113753.8	2222	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	87.3983536585342	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTTATTATGTC	3409	False	NA	24	True	NA	NA	NA	85892719	85907266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_85892773_85896898_85897007_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
ENSMUST00000113755.8	chr2	+	2305	17	FSM	ENSMUSG00000026790.20	ENSMUST00000113755.8	2305	17	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_4	168.994082736645	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCGTGTTGCACAAAGT	7226	False	NA	13	True	AATAAA	-17	NA	29779829	29812551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ENSMUST00000113756.8	chr2	+	3826	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113756.8	3826	21	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_4	191.01803579767	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7203	False	NA	13	True	AATAAA	-13	NA	29779806	29821757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ENSMUST00000113759.9	chr2	+	3807	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113759.9	3807	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	298.874656001475	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7225	False	NA	13	True	AATAAA	-13	NA	29779828	29821757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ENSMUST00000113767.8	chr2	+	2249	16	FSM	ENSMUSG00000026790.20	ENSMUST00000113767.8	2249	16	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	277.041625432393	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCGTGTTGCACAAAGT	7128	False	NA	13	True	AATAAA	-17	NA	29779731	29812551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ENSMUST00000113782.10	chr17	-	803	4	FSM	ENSMUSG00000024436.17	ENSMUST00000113782.10	803	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	650.773044582791	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCCTTTGGGCTGT	4296	False	NA	-6	True	AATAAA	-21	NA	36227281	36221270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36221849_36222310_36222371_36223229_36223297_36227183
ENSMUST00000113805.8	chr1	+	740	3	FSM	ENSMUSG00000026179.15	ENSMUST00000113805.8	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	1381	junction_1	89	4717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCCAGGTTGAATTTGT	NA	False	NA	6	True	AATAAA	-24	NA	74324088	74326613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_74324297_74325000_74325170_74326250
ENSMUST00000113811.8	chrX	+	930	8	FSM	ENSMUSG00000047694.13	ENSMUST00000113811.8	930	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	86.4662255638889	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGATATTTGCAAGGCT	NA	False	NA	26	True	ATTAAA	-36	NA	97979921	97988737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_97979952_97981791_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ENSMUST00000113819.2	chr1	+	1313	11	FSM	ENSMUSG00000006304.15	ENSMUST00000113819.2	1313	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	696.999605451825	2690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTCC	7881	False	NA	18	True	NA	NA	NA	74275708	74307147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_74275770_74275976_74276207_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ENSMUST00000113820.9	chr1	+	1439	11	FSM	ENSMUSG00000006304.15	ENSMUST00000113820.9	1439	11	0	0	0	0	multi-exon	TRUE	canonical	3	1389	junction_1	306.215936881149	2745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	7828	False	NA	14	True	AATAAA	-19	NA	74275655	74307368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ENSMUST00000113836.6	chr6	+	4366	26	FSM	ENSMUSG00000030016.15	ENSMUST00000113836.6	4366	26	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_22	87.4304294853914	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891371	83963851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953337_83958663_83958768_83960957_83961057_83961758_83961878_83963539
ENSMUST00000113842.4	chr6	-	1002	1	FSM	ENSMUSG00000079501.4	ENSMUST00000113842.4	1002	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	418	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCTGGACCACCCACC	NA	False	NA	NA	False	NA	NA	NA	83852362	83851360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83851400_83852400
ENSMUST00000113851.8	chr6	+	1323	10	FSM	ENSMUSG00000034744.14	ENSMUST00000113851.8	1323	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	71.6054001687955	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGGGTGTCATCTTCCA	9304	False	NA	11	True	AATAAA	-19	NA	83772009	83779536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83772231_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUST00000113864.3	chrX	-	2581	14	FSM	ENSMUSG00000057421.13	ENSMUST00000113864.3	2581	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	331.353544718678	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCATGGTGTTTGT	NA	False	NA	-36	True	AATAAA	-4	NA	95000519	94978940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991003_94991055_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ENSMUST00000113865.5	chr5	+	5440	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGATGTCTTCTGTGGGA	NA	False	NA	16	True	AATAAA	-22	NA	53747812	53814704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUST00000113888.3	chr6	-	1007	6	FSM	ENSMUSG00000014554.14	ENSMUST00000113888.3	1007	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	78.3019795407498	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGTTCGTTTATTTC	NA	False	NA	-3	True	AATAAA	-23	NA	83483951	83457198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83457419_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
ENSMUST00000113896.8	chrX	+	1032	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113896.8	1032	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	148.965547610849	2269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTGCTTTCTTTACT	NA	False	NA	NA	False	ATTAAA	-18	NA	93410770	93460699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_93410933_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
ENSMUST00000113898.8	chrX	+	784	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	51.8975854447969	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTGGGTGATGCCATA	NA	False	NA	NA	False	AGTAAA	-39	NA	93410722	93460567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
ENSMUST00000113901.8	chr5	+	1554	12	FSM	ENSMUSG00000029179.15	ENSMUST00000113901.8	1554	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.9165766336411	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCAGCTGCTTTCAAAG	NA	False	NA	NA	False	NA	NA	NA	52932750	52981170	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_52932937_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
ENSMUST00000113904.9	chr5	+	2485	13	FSM	ENSMUSG00000029179.15	ENSMUST00000113904.9	2485	13	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_12	14.4327944472148	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCAGTTGTTATTCC	NA	False	NA	21	True	ATTAAA	-17	NA	52940395	52982007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
ENSMUST00000113905.8	chr16	-	758	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113905.8	758	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	183.830084589003	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGTAGATCTATATGT	NA	False	NA	NA	False	AATAAA	-28	NA	94171874	94165305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171753
ENSMUST00000113906.9	chr16	-	745	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113906.9	745	5	0	0	0	0	multi-exon	TRUE	canonical	3	162	junction_4	117.933243828871	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGTAGATCTATATGT	NA	False	NA	NA	False	AATAAA	-28	NA	94171571	94165305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171463
ENSMUST00000113936.10	chr6	-	1314	4	FSM	ENSMUSG00000030035.15	ENSMUST00000113936.10	1314	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	56.6627449623354	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGATTCTGGGTAGAG	NA	False	NA	-7	True	ATTAAA	-17	NA	83098540	83096024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83098183
ENSMUST00000113938.5	chr6	+	695	3	FSM	ENSMUSG00000030037.10	ENSMUST00000113938.5	695	3	0	0	0	0	multi-exon	FALSE	canonical	3	747	junction_2	17.5	3102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	7383	False	NA	NA	False	ATTAAA	-19	NA	83086020	83086920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83086185_83086294_83086408_83086502
ENSMUST00000113952.10	chr2	+	2890	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	0	0	0	0	multi-exon	FALSE	canonical	3	1324	junction_4	114.959164347413	1943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405168	27426547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ENSMUST00000113963.8	chr6	-	1629	7	FSM	ENSMUSG00000068329.13	ENSMUST00000113963.8	1629	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	187.690939815668	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGGTTGGATCTTCTCC	1897	False	NA	2	True	AATAAA	-31	NA	83031552	83028246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83028616_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
ENSMUST00000113980.4	chr6	-	1945	10	Antisense	novelGene_ENSMUSG00000107599.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	958	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCTTATAGGGACCTCC	NA	False	NA	NA	False	NA	NA	NA	83007164	82923882	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr6_-_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
ENSMUST00000113991.8	chrX	+	4438	18	FSM	ENSMUSG00000045103.20	ENSMUST00000113991.8	4438	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	104.727393692478	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAAATACCTATTGGT	NA	False	NA	10	True	AATAAA	-16	NA	84092018	84248645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84241109_84241142_84246076
ENSMUST00000113995.2	chr1	+	2713	7	FSM	ENSMUSG00000026005.16	ENSMUST00000113995.2	2713	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	373.751439982362	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTTGAATTCTTGAT	NA	False	NA	5	True	ATTAAA	-12	NA	66739989	66758964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_66740177_66740775_66740808_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ENSMUST00000113997.9	chr19	-	4952	24	FSM	ENSMUSG00000024908.16	ENSMUST00000113997.9	4952	24	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_9	67.9031613363524	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTCCTCGTGAGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	3625749	3504932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ENSMUST00000114011.11	chr17	+	840	5	FSM	ENSMUSG00000007050.18	ENSMUST00000114011.11	840	5	0	0	0	0	multi-exon	FALSE	canonical	3	1192	junction_1	217.150869213089	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	-6	True	NA	26	True	AATAAA	-20	NA	35200855	35204867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35201062_35201595_35201664_35204084_35204116_35204224_35204285_35204392
ENSMUST00000114016.10	chrX	-	1725	3	FSM	ENSMUSG00000046942.18	ENSMUST00000114016.10	1725	3	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_2	42	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTCTCTTTTATTAC	NA	False	NA	0	True	AATAAA	-22	NA	78679188	78666836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_78668390_78671446_78671527_78679096
ENSMUST00000114023.3	chr16	-	1154	10	FSM	ENSMUSG00000058240.15	ENSMUST00000114023.3	1154	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	469.417790170329	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTTTCTCTTTTTT	9102	False	NA	NA	False	AATAAA	-24	NA	91525589	91491225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91491554_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUST00000114047.10	chr5	-	2762	11	FSM	ENSMUSG00000039753.17	ENSMUST00000114047.10	2762	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	169.180495329692	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCAATATCTTTTGTGT	2824	False	NA	-9	True	AATAAA	-20	NA	43978980	43901965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43978882
ENSMUST00000114049.2	chr6	-	690	2	FSM	ENSMUSG00000079523.9	ENSMUST00000114049.2	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	26814	junction_1	0	39485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGGCGTGGTCTGAAT	NA	False	NA	-17	True	AATAAA	-14	NA	72935285	72934335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72934636_72934895
ENSMUST00000114050.8	chr6	-	570	3	FSM	ENSMUSG00000079523.9	ENSMUST00000114050.8	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	26814	junction_1	200.5	135165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGGTCTGAATTTTTTA	NA	False	NA	-11	True	AATAAA	-20	NA	72935471	72934329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72934636_72934895_72935008_72935319
ENSMUST00000114058.8	chrX	-	3032	16	FSM	ENSMUSG00000016382.16	ENSMUST00000114058.8	3032	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	107.005794235639	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTCTACTCTCTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	74870559	74829268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74843322_74843350_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478
ENSMUST00000114059.10	chrX	-	3149	16	FSM	ENSMUSG00000016382.16	ENSMUST00000114059.10	3149	16	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_13	28.3953047762008	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCTTTTGTTTTAATGA	NA	False	NA	NA	False	AATAAA	-26	NA	74918788	74829259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
ENSMUST00000114069.8	chr6	-	2164	13	FSM	ENSMUSG00000056698.12	ENSMUST00000114069.8	2164	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	16.532795690183	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTCCAAGATGAAGTT	NA	False	NA	1	True	AATAAA	-23	NA	72575325	72542904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72573418_72573450_72575304
ENSMUST00000114070.10	chrX	+	632	5	FSM	ENSMUSG00000031197.12	ENSMUST00000114070.10	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	774.241685457455	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTCCTTATTAGAAACTT	NA	False	NA	NA	False	AATAAA	-15	NA	74557904	74567652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74567441
ENSMUST00000114079.9	chr1	-	2030	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	6.34209919681348	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCAGTGTTGTCTTCTG	NA	False	NA	0	True	ATTAAA	-20	NA	64656401	64645631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
ENSMUST00000114093.2	chr2	+	1638	11	FSM	ENSMUSG00000026926.15	ENSMUST00000114093.2	1638	11	0	0	0	0	multi-exon	FALSE	canonical	3	1351	junction_8	100.774054200474	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGCCTGGCTGTCTTTT	653	False	NA	NA	False	NA	NA	NA	26279359	26283953	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529
ENSMUST00000114127.8	chrX	+	3332	10	FSM	ENSMUSG00000004221.17	ENSMUST00000114127.8	3332	10	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_7	10.8217887204986	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGGGGGTTTGGGCTTA	NA	False	NA	3	True	NA	NA	NA	73473276	73493892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ENSMUST00000114136.9	chr9	-	4343	8	FSM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_4	73.8752395624418	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGATTGCAATCTCTA	2151	False	NA	-1	True	AGTAAA	-23	NA	58157069	58125358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ENSMUST00000114140.10	chr17	+	1941	7	FSM	ENSMUSG00000034254.18	ENSMUST00000114140.10	1941	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	46.7882345134852	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTGATATCCATATCT	NA	False	NA	43	True	AATAAA	-43	NA	34827987	34832422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34828051_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
ENSMUST00000114151.10	chr6	+	2518	13	FSM	ENSMUSG00000052337.16	ENSMUST00000114151.10	2518	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	563.839288322085	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808393	71852241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUST00000114152.2	chrX	-	746	3	FSM	ENSMUSG00000015289.5	ENSMUST00000114152.2	746	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	662	5009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCAGCCTCTAAATTTT	4536	False	NA	-19	True	AATAAA	-29	NA	73397181	73395767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_73396105_73396450_73396609_73396930
ENSMUST00000114160.2	chrX	+	1383	13	FSM	ENSMUSG00000001962.9	ENSMUST00000114160.2	1383	13	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_3	69.864700592566	3255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGAACCTGCGCTTTA	199	False	NA	NA	False	AATAAA	-33	NA	73356638	73363755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ENSMUST00000114171.10	chrX	+	2157	10	FSM	ENSMUSG00000019087.14	ENSMUST00000114171.10	2157	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	217.728565868289	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGGCTTCGTGTCACT	NA	False	NA	14	True	AATAAA	-19	NA	73340768	73348295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347336
ENSMUST00000114180.11	chrX	+	1786	10	FSM	ENSMUSG00000009995.18	ENSMUST00000114180.11	1786	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	91.4165611600053	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326367	73333754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332053_73332120_73332267_73332321_73332710_73332789_73332904
ENSMUST00000114184.8	chr16	+	2202	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	83.9617784882715	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGATATCATTCTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	84631812	84658203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ENSMUST00000114185.4	chr6	+	2874	2	FSM	ENSMUSG00000073018.7	ENSMUST00000114185.4	2874	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTGTGATGTGATT	NA	False	NA	11	True	NA	NA	NA	71270748	71279864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_71270843_71277084
ENSMUST00000114193.8	chr16	-	680	4	FSM	ENSMUSG00000022890.14	ENSMUST00000114193.8	680	4	0	0	0	0	multi-exon	FALSE	canonical	1	103	junction_3	3139.53779329945	2089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTTAAATTCTTTGGT	NA	False	NA	3	True	AATAAA	-23	NA	84631127	84624753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_84624884_84625312_84625438_84628216_84628396_84630881
ENSMUST00000114195.8	chr16	+	4370	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	0	0	0	0	multi-exon	FALSE	canonical	3	3263	junction_7	414.866630361679	8985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTATGGTCTATGAAT	NA	False	NA	17	True	AATAAA	-20	NA	84571010	84622816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
ENSMUST00000114218.2	chr16	-	1271	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGGTTACTCAATCA	3243	False	NA	-4	True	AATAAA	-13	NA	78373545	78341848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
ENSMUST00000114219.8	chr16	-	1576	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114219.8	1576	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	120.034370077907	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGCTATTTTGGGTAT	3243	False	NA	NA	False	TATAAA	-12	NA	78373545	78341576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373278
ENSMUST00000114226.8	chr6	+	1155	5	FSM	ENSMUSG00000036402.14	ENSMUST00000114226.8	1155	5	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_3	135.972423674803	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCCTTTGATGGGGTCT	NA	False	NA	17	True	AATAAA	-33	NA	66873417	66995273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_66873512_66891436_66891495_66920808_66920867_66992708_66992828_66994447
ENSMUST00000114227.8	chr6	+	1125	5	FSM	ENSMUSG00000036402.14	ENSMUST00000114227.8	1125	5	0	0	0	0	multi-exon	FALSE	canonical	2	75	junction_1	125.742544510599	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAGGCTAAAACTGAAAG	NA	False	NA	1	True	AATAAA	-17	NA	66873414	66995257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_66873500_66891436_66891495_66920808_66920862_66992708_66992828_66994447
ENSMUST00000114228.8	chr6	+	748	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	0	0	0	0	multi-exon	FALSE	canonical	2	250	junction_2	52.550504807809	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCACTTCAGTCAAAAACC	NA	False	NA	3	True	ATTAAA	-9	NA	66873406	66994913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
ENSMUST00000114229.4	chr16	+	1657	8	FSM	ENSMUSG00000022865.15	ENSMUST00000114229.4	1657	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	23.9965983983955	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAATGAACATTTTAGA	NA	False	NA	NA	False	AATAAA	-15	NA	78098643	78156662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075_78133260_78156098
ENSMUST00000114234.2	chr2	-	2151	11	FSM	ENSMUSG00000026942.14	ENSMUST00000114234.2	2151	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	38.6141165896619	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGTGGTGTTCATC	NA	False	NA	-18	True	ATTAAA	-13	NA	25436922	25408877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428856_25429097_25436873
ENSMUST00000114251.8	chr2	-	830	8	FSM	ENSMUSG00000015090.14	ENSMUST00000114251.8	830	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3.45229884959845	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCTTTTGTCTGTCTG	5595	False	NA	1	True	AATAAA	-19	NA	25360058	25356720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_25356844_25357298_25357358_25357829_25357932_25358083_25358201_25358844_25358922_25358999_25359140_25359571_25359747_25360021
ENSMUST00000114259.3	chr2	-	775	7	FSM	ENSMUSG00000015090.14	ENSMUST00000114259.3	775	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.71558280160133	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCTTTTGTCTGTCTG	5892	False	NA	1	True	AATAAA	-19	NA	25359761	25356720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_25356844_25357331_25357358_25357829_25357932_25358083_25358201_25358844_25358922_25358999_25359140_25359571
ENSMUST00000114276.3	chr9	+	2024	7	FSM	ENSMUSG00000032320.8	ENSMUST00000114276.3	2024	7	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_5	26.0666879795309	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTGCACCTGAGACATTT	960	False	NA	18	True	ATTAAA	-19	NA	55949140	55966361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
ENSMUST00000114294.8	chr6	+	2178	16	FSM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	24.9849732617205	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACATTATCTGTCACAT	NA	False	NA	76	True	NA	NA	NA	58617548	58669496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_58617613_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ENSMUST00000114329.8	chr5	-	1906	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114329.8	1906	13	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_12	91.0092715057098	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794536	34790992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794270
ENSMUST00000114331.10	chr5	-	1754	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114331.10	1754	13	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_12	99.4937183946806	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTCCGTCTTACTATT	NA	False	NA	-4	True	AATAAA	-20	NA	34794556	34790989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794442
ENSMUST00000114340.9	chr5	+	3761	15	FSM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_14	43.2925501438664	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCAACTTTGCAT	NA	False	NA	26	True	AATAAA	-27	NA	34731216	34789652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ENSMUST00000114348.8	chr1	-	1033	7	FSM	ENSMUSG00000026035.16	ENSMUST00000114348.8	1033	7	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_6	35.853482707015	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTCCTTTTTTTTA	NA	False	NA	1	True	AATAGA	-28	NA	58484593	58470152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484304
ENSMUST00000114361.9	chr17	-	2260	12	FSM	ENSMUSG00000079553.12	ENSMUST00000114361.9	2260	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	183.72576581632	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTCTTGTTTGTTT	9721	False	NA	-16	True	AATAAA	-17	NA	34109607	34094641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103656_34103715_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ENSMUST00000114371.5	chr16	-	1150	10	FSM	ENSMUSG00000022748.9	ENSMUST00000114371.5	1150	10	0	0	0	0	multi-exon	TRUE	canonical	3	200	junction_5	24.152805731247	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACAGTTTCTCTTTCCCCT	NA	False	NA	-9	True	AATAAA	-32	NA	57427209	57122362	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_57122646_57124042_57124132_57127188_57127277_57127731_57127793_57131615_57131719_57133020_57133081_57136524_57136655_57138268_57138344_57143826_57143907_57427028
ENSMUST00000114379.8	chrX	-	1318	11	FSM	ENSMUSG00000031387.15	ENSMUST00000114379.8	1318	11	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_8	509.144390129166	4761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974398	72965726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973834_72973869_72974013_72974124_72974319
ENSMUST00000114383.8	chr5	+	511	4	FSM	ENSMUSG00000070858.13	ENSMUST00000114383.8	511	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	4.98887651569859	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGTCCTGTATTTTG	NA	False	NA	5	True	AATAAA	-13	NA	34140813	34142353	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_34140984_34141100_34141241_34141395_34141485_34142241
ENSMUST00000114387.8	chrX	-	979	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114387.8	979	8	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	343.561063104701	8456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAATGTGCATAGTGG	NA	False	NA	-15	True	AATAAA	-24	NA	72965494	72960492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72960889_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ENSMUST00000114389.10	chrX	-	1031	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114389.10	1031	8	0	0	0	0	multi-exon	FALSE	canonical	3	794	junction_1	110.126457923125	8728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGGGGTATGCTTTTT	NA	False	NA	-3	True	AATAAA	-36	NA	72965530	72960480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72960893_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ENSMUST00000114391.10	chrX	-	834	7	FSM	ENSMUSG00000031388.15	ENSMUST00000114391.10	834	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	477.944789931036	1234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGAAATTTGTGAATGT	NA	False	NA	-24	True	AATAAA	-15	NA	72965490	72960501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72960802_72961448_72961534_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ENSMUST00000114410.10	chr1	-	2512	7	FSM	ENSMUSG00000054770.17	ENSMUST00000114410.10	2512	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	14.3372087784044	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGTGACTACTTACT	NA	False	NA	1	True	AATAAA	-25	NA	58009287	57994406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58009179
ENSMUST00000114426.10	chr5	+	2187	15	FSM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	0	0	0	0	multi-exon	FALSE	canonical	3	792	junction_7	83.9525193797308	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAACCCAGGTCCTGTTGT	NA	False	NA	32	True	ACTAAA	-20	NA	33815929	33829542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ENSMUST00000114437.9	chr9	+	3430	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAATTTCACAGTTTC	-13	True	NA	NA	False	NA	NA	NA	50768236	50792731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ENSMUST00000114444.9	chr16	-	2295	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	0	0	0	0	multi-exon	FALSE	canonical	3	1624	junction_1	369.138439477657	2309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55850102	55835868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
ENSMUST00000114445.8	chr6	+	1585	5	FSM	ENSMUSG00000029836.16	ENSMUST00000114445.8	1585	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1009.62873745749	2253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	False	NA	-1	True	AATAAA	-19	NA	51447645	51460684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_51447715_51448795_51448849_51452210_51452354_51458703_51458799_51459459
ENSMUST00000114446.8	chr6	+	1719	6	FSM	ENSMUSG00000029836.16	ENSMUST00000114446.8	1719	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	927.333381260483	8927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	False	NA	-1	True	AATAAA	-19	NA	51447674	51460684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_51447715_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ENSMUST00000114449.7	chr5	+	2193	9	FSM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_4	39.7106723690244	1984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGAGGTGTTTGTAA	NA	False	NA	20	True	AATAAA	-21	NA	33492852	33530640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ENSMUST00000114459.8	chr6	-	1728	12	FSM	ENSMUSG00000004980.17	ENSMUST00000114459.8	1728	12	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_11	2433.70552759395	4453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446806	51439739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ENSMUST00000114472.8	chrX	-	1532	12	FSM	ENSMUSG00000002012.14	ENSMUST00000114472.8	1532	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_11	13.5176652099123	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTGGTGCTGAACTGG	NA	False	NA	-3	True	AATAAA	-14	NA	72703723	72699600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703624
ENSMUST00000114473.8	chrX	-	1492	12	FSM	ENSMUSG00000002012.14	ENSMUST00000114473.8	1492	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	19.8644164606543	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGTGCTGAACTGGG	NA	False	NA	-2	True	AATAAA	-15	NA	72703330	72699599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703272
ENSMUST00000114474.8	chr9	+	1689	4	FSM	ENSMUSG00000032068.15	ENSMUST00000114474.8	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	3.39934634239519	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTTCTATACCGTCCA	NA	False	NA	NA	False	AATAAA	-17	NA	50405824	50416782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_50406047_50410394_50410600_50412372_50412429_50415576
ENSMUST00000114492.8	chr1	-	3565	2	FSM	ENSMUSG00000043629.13	ENSMUST00000114492.8	3565	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTCAGTCCTCATTT	174	False	NA	-5	True	AATAAA	-14	NA	52992509	52961482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_52964894_52992355
ENSMUST00000114503.9	chrX	-	1656	9	FSM	ENSMUSG00000067764.12	ENSMUST00000114503.9	1656	9	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_7	127.059963698248	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTTCAGCACATATG	NA	False	NA	NA	False	ATTAAA	-14	NA	72336582	72326501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336481
ENSMUST00000114517.2	chrX	-	1015	2	FSM	ENSMUSG00000079566.2	ENSMUST00000114517.2	1015	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAAAGTTGAAGTTGTA	NA	False	NA	NA	False	AATAAA	-14	NA	72220595	72218907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72219726_72220398
ENSMUST00000114518.9	chrX	+	1652	9	FSM	ENSMUSG00000072479.11	ENSMUST00000114518.9	1652	9	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_8	146.338167868127	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTTCAGCACATATG	NA	False	NA	NA	False	ATTAAA	-14	NA	72192401	72202478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72192503_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72200075_72200175_72201393_72201499_72201594
ENSMUST00000114521.8	chrX	-	1474	8	FSM	ENSMUSG00000058328.14	ENSMUST00000114521.8	1474	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_7	121.461844180947	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTTCAGCACATATG	NA	False	NA	NA	False	ATTAAA	-14	NA	72161308	72151240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161284
ENSMUST00000114524.9	chrX	-	1584	9	FSM	ENSMUSG00000057836.13	ENSMUST00000114524.9	1584	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	496.010190797528	2871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140623	72129898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138551_72138689_72140586
ENSMUST00000114526.9	chr2	+	3725	13	FSM	ENSMUSG00000026781.18	ENSMUST00000114526.9	3725	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	24.981103969912	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGTATTGACTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	22959079	23004525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
ENSMUST00000114530.8	chrX	-	1220	9	FSM	ENSMUSG00000031362.18	ENSMUST00000114530.8	1220	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	102.200477004758	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72286736	72277684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72285802_72286183_72286267_72286581
ENSMUST00000114531.8	chrX	-	1104	9	FSM	ENSMUSG00000031362.18	ENSMUST00000114531.8	1104	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	121.935433734415	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72286633	72277684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72285789_72286183_72286267_72286581
ENSMUST00000114533.9	chr5	+	2424	13	FSM	ENSMUSG00000029141.17	ENSMUST00000114533.9	2424	13	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	19.394300422776	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACTGAGGTGATGATCA	NA	False	NA	6	True	AGTAAA	-16	NA	31684338	31711381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31705954_31706026_31708056_31708127_31711082
ENSMUST00000114540.4	chrX	-	2287	2	FSM	ENSMUSG00000050424.10	ENSMUST00000114540.4	2287	2	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTCTGGCGATGTTC	NA	False	NA	0	True	AATAAA	-21	NA	72080709	72077586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72077934_72078769
ENSMUST00000114546.9	chrX	+	3533	19	FSM	ENSMUSG00000031351.16	ENSMUST00000114546.9	3533	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	16.5279411756629	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTGTGTATGTGTGCAC	NA	False	NA	45	True	AATAAA	-45	NA	72030965	72075149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045013_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ENSMUST00000114551.10	chrX	-	1286	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	0	0	0	0	multi-exon	TRUE	canonical	3	590	junction_4	36.4862987983161	1964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTTGTGGATTTTTACA	NA	False	NA	-2	True	CATAAA	-17	NA	71962017	71957137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
ENSMUST00000114576.9	chrX	+	4195	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	56.5	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCTGTGTCCTCATTCG	NA	False	NA	16	True	ATTAAA	-20	NA	70860363	70868312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_70860547_70863673_70863784_70864410
ENSMUST00000114582.9	chrX	+	1743	5	FSM	ENSMUSG00000015217.12	ENSMUST00000114582.9	1743	5	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	303.596360320739	1573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCACCAGTCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	70599533	70604282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_70599797_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ENSMUST00000114603.8	chr5	-	1966	12	FSM	ENSMUSG00000029145.13	ENSMUST00000114603.8	1966	12	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_3	55.8517814183514	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350358	31344911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925
ENSMUST00000114618.8	chr6	-	2775	20	FSM	ENSMUSG00000029687.17	ENSMUST00000114618.8	2775	20	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_12	268.321921839443	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGTTAGTATTGCATG	NA	False	NA	NA	False	AATAAA	-26	NA	47571964	47507072	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ENSMUST00000114647.8	chrX	+	679	4	FSM	ENSMUSG00000062170.13	ENSMUST00000114647.8	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_1	201.191451110627	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATTCTTTTTGTTAAA	NA	False	NA	27	True	ATTAAA	-27	NA	67805486	67848173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_67805838_67815650_67815748_67847210_67847300_67848031
ENSMUST00000114664.8	chr9	+	3424	6	FSM	ENSMUSG00000070305.11	ENSMUST00000114664.8	3424	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3.70944739819828	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTTTCGTGTCTAACT	NA	False	NA	27	True	AATAAA	-20	NA	44966483	44988734	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44966617_44973338_44973506_44977636_44977848_44979504_44979671_44981953_44982018_44986051
ENSMUST00000114666.9	chr16	-	4234	15	FSM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_14	44.4035299203538	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTTCCCTTTTTATT	NA	False	NA	0	True	AATAAA	-18	NA	43959668	43905764	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
ENSMUST00000114709.3	chr1	+	3570	10	FSM	ENSMUSG00000041684.12	ENSMUST00000114709.3	3570	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	6.90857402520436	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTTTGTGGTTCAGGC	NA	False	NA	NA	False	ATTAAA	-12	NA	44159127	44183930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ENSMUST00000114725.3	chrX	+	2156	17	FSM	ENSMUSG00000079584.3	ENSMUST00000114725.3	2156	17	0	0	0	0	multi-exon	FALSE	canonical	1	199	junction_7	106.775300719548	2391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAACCTCCCTGTCTGGC	NA	False	NA	9	True	TATAAA	-2	NA	56454513	56534127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468737_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
ENSMUST00000114726.8	chrX	-	2108	9	FSM	ENSMUSG00000031134.17	ENSMUST00000114726.8	2108	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	24.9871842151132	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACCCTGAAGCTGCAAAC	NA	False	NA	-16	True	AATAAA	-15	NA	56438396	56431721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_56432754_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437062_56438211
ENSMUST00000114772.9	chrX	+	2283	6	FSM	ENSMUSG00000023092.17	ENSMUST00000114772.9	2283	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	55.431399044224	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCACGCCTCCTGTCTTT	NA	False	NA	6	True	AATAAA	-12	NA	55825082	55838700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_55825155_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
ENSMUST00000114777.10	chr18	+	3060	14	FSM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	299.077338556217	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCATAATTCTCATCAAT	7899	False	NA	NA	False	CATAAA	-17	NA	77152903	77241496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ENSMUST00000114783.6	chr5	+	2045	16	FSM	ENSMUSG00000059447.14	ENSMUST00000114783.6	2045	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	145.866361974088	1750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGACTGTTCGTAGTCTC	NA	False	NA	-1	True	AATAAA	-14	NA	30360269	30389580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_30360385_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUST00000114786.8	chr5	+	2048	16	FSM	ENSMUSG00000059447.14	ENSMUST00000114786.8	2048	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	146.097988426337	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCGTAGTCTCGTTATTA	NA	False	NA	6	True	AATAAA	-21	NA	30360269	30389587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_30360381_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUST00000114792.8	chr17	-	3858	14	FSM	ENSMUSG00000024222.18	ENSMUST00000114792.8	3858	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	250.208788554324	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28736498	28618070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28706878_28706978_28718339_28718393_28726209_28726444_28736368
ENSMUST00000114810.2	chrX	-	984	8	FSM	ENSMUSG00000054626.12	ENSMUST00000114810.2	984	8	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_7	54.1238187409392	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAGTGGCAAATAGTCC	NA	False	NA	NA	False	AATAAA	-13	NA	52799663	52785714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798188_52799598
ENSMUST00000114822.2	chr6	-	751	3	FSM	ENSMUSG00000029922.16	ENSMUST00000114822.2	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	4055	junction_2	144.5	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCCGAATGCTGTCCC	NA	False	NA	0	True	AATAAA	-25	NA	39397232	39382472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_39382895_39387021_39387151_39397032
ENSMUST00000114829.9	chr16	-	1030	6	FSM	ENSMUSG00000022838.15	ENSMUST00000114829.9	1030	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	1.32664991614216	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGTATTCTCATGTG	8200	False	NA	NA	False	AATAAA	-23	NA	36648623	36614105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_36614289_36620948_36621207_36628376_36628523_36630833_36630971_36645019_36645115_36648412
ENSMUST00000114839.8	chr5	+	1605	8	FSM	ENSMUSG00000029131.15	ENSMUST00000114839.8	1605	8	0	0	0	0	multi-exon	FALSE	canonical	3	1788	junction_5	99.4337026590572	4905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTCTTGTGTCTGTGTG	4546	False	NA	42	True	AATAAA	-42	NA	29940937	29972101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
ENSMUST00000114840.2	chr9	+	1735	4	FSM	ENSMUSG00000032011.6	ENSMUST00000114840.2	1735	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	3.74165738677394	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTGTCTGTCTCTTCT	NA	False	NA	34	True	AATAAA	-20	NA	43954680	43959876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_43954774_43957253_43957316_43957910_43958250_43958635
ENSMUST00000114848.8	chr17	-	2207	6	FSM	ENSMUSG00000024218.14	ENSMUST00000114848.8	2207	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	61.2483469164679	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTTCTCTGTGTTGCCCT	NA	False	NA	-3	True	AATAAA	-25	NA	28128216	28120095	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474_28127218_28127754
ENSMUST00000114881.9	chr17	-	644	6	FSM	ENSMUSG00000052146.17	ENSMUST00000114881.9	644	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	2469.22413725445	124770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCCACTTGTGTATGTT	NA	False	NA	NA	False	AATAAA	-14	NA	27855643	27849397	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27855538
ENSMUST00000114888.11	chr17	+	1631	5	FSM	ENSMUSG00000046711.17	ENSMUST00000114888.11	1631	5	0	0	0	0	multi-exon	FALSE	canonical	3	2165	junction_2	1373.00680533638	10612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTCTGGTGTAAGGAG	NA	False	NA	NA	False	AATAAA	-21	NA	27775558	27782642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_27775686_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ENSMUST00000114897.9	chr2	-	1166	10	FSM	ENSMUSG00000025781.15	ENSMUST00000114897.9	1166	10	0	0	0	0	multi-exon	FALSE	canonical	3	3857	junction_2	289.314942238504	29338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9504	False	NA	-2	True	AATAAA	-19	NA	10085321	10060840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUST00000114900.8	chr6	-	4944	13	FSM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_3	27.2865453210104	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTCTGTTTATGGTTCT	9994	False	NA	0	True	AATAAA	-32	NA	38331208	38282220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
ENSMUST00000114912.8	chrX	-	3167	15	FSM	ENSMUSG00000031109.17	ENSMUST00000114912.8	3167	15	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_13	14.647560220329	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACAGGGACTCCTCTGG	NA	False	NA	45	True	NA	NA	NA	48377119	48099334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375732_48375782_48376977
ENSMUST00000114918.9	chrX	-	3226	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114918.9	3226	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	10.7695042700313	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACAGGGACTCCTCTGG	NA	False	NA	45	True	NA	NA	NA	48377119	48099334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48376977
ENSMUST00000114925.10	chr1	+	1094	6	FSM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_1	76.7739539166767	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGACTGTTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	37469219	37478065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ENSMUST00000114935.9	chr17	-	662	6	FSM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_5	278.895392575783	1870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	9278	False	NA	-18	True	AATAAA	-17	NA	27158517	27156946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158424
ENSMUST00000114940.9	chrX	-	3863	18	FSM	ENSMUSG00000036916.14	ENSMUST00000114940.9	3863	18	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	21.8484873935035	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTGCATCATCTAATAC	NA	False	NA	43	True	AATAAA	-21	NA	47680638	47630502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_47632167_47632281_47632319_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667434_47677579_47677627_47680549
ENSMUST00000114945.9	chrX	-	2221	16	FSM	ENSMUSG00000036932.15	ENSMUST00000114945.9	2221	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_15	394.039704711199	2564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	-1	True	ATTAAA	-16	NA	47602436	47563820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47592459_47592591_47602112
ENSMUST00000114959.9	chr18	+	1496	9	FSM	ENSMUSG00000079608.11	ENSMUST00000114959.9	1496	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.87082869338697	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGGGTTATAGTATACA	NA	False	NA	NA	False	NA	NA	NA	70605524	70634137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_70605640_70606272_70606426_70607355_70607437_70609170_70609265_70609452_70609503_70616482_70616610_70629184_70629303_70631618_70631713_70633473
ENSMUST00000114964.8	chr16	-	2693	16	FSM	ENSMUSG00000061751.17	ENSMUST00000114964.8	2693	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	6.46701030014815	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGTTTTAATGAGGTCA	NA	False	NA	-10	True	AATAAA	-12	NA	33916398	33833515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_33834052_33834327_33834585_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874035_33875201_33875486_33916165
ENSMUST00000114975.8	chr5	-	2205	12	FSM	ENSMUSG00000028944.15	ENSMUST00000114975.8	2205	12	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	21.3386701313649	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTTTTATGTATATGA	NA	False	NA	-9	True	AATAAA	-19	NA	25113467	25067745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320
ENSMUST00000114976.9	chr17	+	4934	10	FSM	ENSMUSG00000024188.17	ENSMUST00000114976.9	4934	10	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_9	132.110877487879	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTCAGGTGTTTTGT	NA	False	NA	17	True	NA	NA	NA	26471924	26504478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ENSMUST00000114981.3	chr1	-	1659	10	FSM	ENSMUSG00000046337.18	ENSMUST00000114981.3	1659	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_7	27.7328525599353	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACGCC	NA	False	NA	NA	False	AATACA	-27	NA	36722264	36639056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
ENSMUST00000114989.9	chr6	-	3279	11	FSM	ENSMUSG00000038784.14	ENSMUST00000114989.9	3279	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	65.3360543651053	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCGGGTGAGTCTTGTT	7676	False	NA	-3	True	AATAAA	-19	NA	35110629	34999000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_35000368_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ENSMUST00000114997.3	chr6	+	1207	8	FSM	ENSMUSG00000029848.12	ENSMUST00000114997.3	1207	8	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_2	25.1931315550691	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTGGTGTCCTGGCA	NA	False	NA	11	True	TATAAA	-16	NA	34897944	34916277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_34897990_34907295_34907372_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
ENSMUST00000114999.8	chr6	+	1455	9	FSM	ENSMUSG00000029848.12	ENSMUST00000114999.8	1455	9	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_3	19.2272592950738	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTGGTGTCCTGGCA	NA	False	NA	11	True	TATAAA	-16	NA	34897894	34916277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_34897990_34904653_34904852_34907295_34907372_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
ENSMUST00000115006.2	chr6	-	1501	4	FSM	ENSMUSG00000046806.14	ENSMUST00000115006.2	1501	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.9566858950296	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGTGACGACTATTC	7648	False	NA	-20	True	NA	NA	NA	34854944	34850629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_34851631_34852390_34852548_34853473_34853707_34854834
ENSMUST00000115011.8	chr1	-	2290	9	FSM	ENSMUSG00000001143.14	ENSMUST00000115011.8	2290	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	79.4618619213016	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCTGGCTCAGTGGCC	NA	False	NA	-3	True	CATAAA	-21	NA	36484352	36462266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36468503_36468537_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ENSMUST00000115075.2	chr16	+	518	4	FSM	ENSMUSG00000060636.15	ENSMUST00000115075.2	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	8092	junction_3	1051.6733755729	50577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTGTATTTTTTTTTCA	NA	False	NA	1	True	AATAAA	-16	NA	32877387	32880526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32877549_32877759_32877913_32879048_32879194_32880467
ENSMUST00000115076.8	chr16	+	519	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115076.8	519	5	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	3846.56847072816	120086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGTCCTAAATTGAGT	NA	False	NA	20	True	AATAAA	-35	NA	32877175	32880545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32877276_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ENSMUST00000115078.8	chr16	+	500	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115078.8	500	5	0	0	0	0	multi-exon	FALSE	canonical	3	927	junction_1	3609.33805392346	118924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	10	True	AATAAA	-25	NA	32876896	32880535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32876988_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ENSMUST00000115079.8	chr16	+	510	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115079.8	510	5	0	0	0	0	multi-exon	FALSE	canonical	3	3184	junction_1	2675.04705566089	162097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCCTAAATTGAGTT	NA	False	NA	21	True	AATAAA	-36	NA	32876835	32880546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32876926_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ENSMUST00000115091.2	chr6	-	1363	6	FSM	ENSMUSG00000053768.14	ENSMUST00000115091.2	1363	6	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_1	31.2089730686545	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGAATTATTAGTTTCTG	NA	False	NA	-12	True	AATAAA	-16	NA	33037152	32828377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ENSMUST00000115105.9	chr16	-	5255	20	FSM	ENSMUSG00000035629.20	ENSMUST00000115105.9	5255	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_13	16.5920583078763	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACTGTGGAATGGTTTTG	NA	False	NA	-10	True	AATAAA	-40	NA	32688736	32642072	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663559_32663600_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
ENSMUST00000115118.8	chrX	-	3344	23	FSM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	0	0	0	0	multi-exon	FALSE	non_canonical	3	600	junction_22	211.248653964121	1658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTCATTTAAAGATACT	NA	False	NA	-28	True	AATAAA	-20	NA	37665073	37622150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ENSMUST00000115130.3	chr6	-	485	3	FSM	ENSMUSG00000029790.17	ENSMUST00000115130.3	485	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	51	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTATTCCAGACATCTTA	8	True	NA	NA	False	NA	NA	NA	30693699	30679086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_30679444_30680129_30680194_30693635
ENSMUST00000115150.4	chrX	+	763	3	FSM	ENSMUSG00000053909.9	ENSMUST00000115150.4	763	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTTTGTGTTTGTCA	NA	False	NA	NA	False	AATAAA	-18	NA	37155351	37160568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_37155824_37158275_37158322_37160323
ENSMUST00000115157.8	chr6	-	2273	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	253.514963532123	3420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTGAAAGGTCAA	2	True	NA	-18	True	ATTAAA	-16	NA	30509717	30482413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508842_30509683
ENSMUST00000115160.10	chr6	-	3485	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	4060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGGTGAAATCATTTGAA	NA	False	NA	-9	True	AATAAA	-19	NA	30509782	30481226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ENSMUST00000115162.2	chrX	-	779	4	FSM	ENSMUSG00000079627.3	ENSMUST00000115162.2	779	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	11.2644968324772	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATACATTTGTTTTGTGC	9229	False	NA	NA	False	AATAAA	-12	NA	36854930	36850649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_36850876_36852672_36852719_36854261_36854674_36854835
ENSMUST00000115166.3	chrX	-	979	4	FSM	ENSMUSG00000079628.4	ENSMUST00000115166.3	979	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1.24721912892465	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTCTTTTTGATTA	6368	False	NA	NA	False	AATAAA	-21	NA	36832980	36828152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_36828390_36829677_36829724_36832090_36832497_36832690
ENSMUST00000115168.9	chr16	+	1718	4	FSM	ENSMUSG00000035790.16	ENSMUST00000115168.9	1718	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	4.96655480858378	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTTTTCTTCAGTCTG	6492	False	NA	26	True	AATAAA	-26	NA	31918617	31926887	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_31918930_31921784_31921863_31922701_31922866_31925723
ENSMUST00000115169.4	chrX	-	795	4	FSM	ENSMUSG00000079629.6	ENSMUST00000115169.4	795	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	7.03957069398096	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATATTTGTTTTGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	36825123	36820769	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_36820996_36822809_36822856_36824438_36824851_36825012
ENSMUST00000115191.7	chrX	+	799	4	FSM	ENSMUSG00000079638.9	ENSMUST00000115191.7	799	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	23.6126143312331	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTGTTTTGTGCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	36593719	36598459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36593831_36593992_36594405_36595944_36595991_36598229
ENSMUST00000115199.8	chr6	+	2296	13	FSM	ENSMUSG00000058440.15	ENSMUST00000115199.8	2296	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	210.604619027113	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTAATGCTTGGTA	NA	False	NA	NA	False	ATTAAA	-17	NA	30076319	30129759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_30076487_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30129179
ENSMUST00000115206.8	chr6	+	1879	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115206.8	1879	12	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_11	119.561388499108	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGGTTTGGGCTTTGG	15	True	NA	7	True	AATAAA	-23	NA	30048029	30144859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
ENSMUST00000115211.8	chr6	+	3295	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115211.8	3295	12	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_11	122.448774919714	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTATGTTCTTTTCT	-14	True	NA	69	True	TATAAA	-12	NA	30048000	30153179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ENSMUST00000115212.8	chr6	+	3584	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115212.8	3584	12	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_11	130.142642658033	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGCCCCTCTCTCTA	-28	True	NA	NA	False	AATAAA	-18	NA	30047986	30153457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ENSMUST00000115217.8	chr5	-	3954	5	FSM	ENSMUSG00000044968.17	ENSMUST00000115217.8	3954	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	48.8108594474631	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAAAGATACCTGAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	21906392	21867898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21905972
ENSMUST00000115227.10	chr16	+	3122	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCAGAGTGGCTTGGAAT	NA	False	NA	17	True	AATAAA	-17	NA	31247565	31277719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ENSMUST00000115231.4	chrX	-	612	3	FSM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	0	0	0	0	multi-exon	FALSE	canonical	3	12849	junction_1	35	267287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGACCCGATAAGGCTTC	NA	False	NA	-5	True	TATAAA	-17	NA	36349055	36346172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_36346403_36347637_36347742_36348777
ENSMUST00000115246.9	chr18	+	1484	10	FSM	ENSMUSG00000024576.15	ENSMUST00000115246.9	1484	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTATTGTAACTTAT	472	False	NA	25	True	ATTAAA	-16	NA	61688388	61715187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61715106
ENSMUST00000115248.10	chrX	-	3340	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	34.0999348321306	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTGTTTTGATCATTT	NA	False	NA	NA	False	AATAAA	-28	NA	36127899	36112195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ENSMUST00000115262.9	chr17	+	886	5	FSM	ENSMUSG00000075705.14	ENSMUST00000115262.9	886	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	30.3685692781204	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTTGTTGTCTCATG	NA	False	NA	19	True	AATAAA	-19	NA	24955615	24961752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24955737_24958472_24958622_24959053_24959169_24960879_24960912_24961283
ENSMUST00000115272.9	chr9	+	2533	14	FSM	ENSMUSG00000001833.18	ENSMUST00000115272.9	2533	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	485.66204432895	2515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTCTTGTATATTCT	NA	False	NA	22	True	AATAAA	-22	NA	25163734	25219867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_25163996_25176597_25176603_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ENSMUST00000115313.8	chrX	-	3251	9	FSM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	0	0	0	0	multi-exon	TRUE	canonical	3	241	junction_8	283.721694623446	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGTTACTCCTCAGTTT	NA	False	NA	-8	True	AATAAA	-29	NA	23231321	23085509	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23227732_23227824_23231194
ENSMUST00000115315.3	chr9	-	1349	5	FSM	ENSMUSG00000001348.16	ENSMUST00000115315.3	1349	5	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_4	98.7734149455206	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGGTGTGTCATCAAG	4541	False	NA	-23	True	AATAAA	-17	NA	22041894	22038026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22041818
ENSMUST00000115330.8	chr6	-	3151	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_8	16.939542404853	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACATCTTCCAGATACTT	0	True	NA	NA	False	AATATA	-22	NA	25809225	25743735	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
ENSMUST00000115331.10	chr9	+	1983	18	FSM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_11	154.653737577573	1831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGGCTGTTTTTTA	NA	False	NA	18	True	AATAAA	-14	NA	21914361	21925516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ENSMUST00000115333.9	chrX	-	3130	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115333.9	3130	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	19.753164303473	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATTCCTTTAATGGT	3285	False	NA	-1	True	TTTAAA	-5	NA	20928242	20895177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926768_20928132
ENSMUST00000115334.8	chrX	-	3160	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115334.8	3160	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	3.67423461417477	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATATTGTATTCCTTTAA	3236	False	NA	-5	True	TTTAAA	-1	NA	20928291	20895181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926797_20928176
ENSMUST00000115338.8	chr16	-	1279	10	FSM	ENSMUSG00000022881.16	ENSMUST00000115338.8	1279	10	0	0	0	0	multi-exon	FALSE	canonical	2	1237	junction_9	172.55065457732	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAGTGAATATACAAT	NA	False	NA	-34	True	AATAAA	-15	NA	22946467	22932700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ENSMUST00000115342.10	chrX	+	883	6	FSM	ENSMUSG00000001131.12	ENSMUST00000115342.10	883	6	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_1	90.9382207875215	5075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	16	True	AATAAA	-17	NA	20736404	20740972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20736564_20737272_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
ENSMUST00000115352.10	chr1	-	960	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	0	0	0	0	multi-exon	TRUE	canonical	3	1066	junction_3	717.825574603995	9129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGTGTTTTGTTTATT	NA	False	NA	-2	True	TATAAA	-20	NA	16727266	16712990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
ENSMUST00000115364.8	chrX	+	3270	16	FSM	ENSMUSG00000031065.15	ENSMUST00000115364.8	3270	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	561.492914766815	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	1860	False	NA	18	True	ATTAAA	-20	NA	20554192	20566119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20554601_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ENSMUST00000115371.9	chr17	+	1646	7	FSM	ENSMUSG00000034681.18	ENSMUST00000115371.9	1646	7	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_1	362.779738807019	2445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	884	False	NA	NA	False	AATAAA	-18	NA	24633619	24644869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24633709_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUST00000115374.8	chrX	+	3564	24	FSM	ENSMUSG00000031060.17	ENSMUST00000115374.8	3564	24	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_4	93.2983708932913	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTCATGTCCTAGTAT	394	False	NA	41	True	AATAAA	-29	NA	20483860	20517140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ENSMUST00000115379.2	chr16	-	3078	15	FSM	ENSMUSG00000033581.18	ENSMUST00000115379.2	3078	15	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_2	83.5777775366107	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCACCTTGCTCTTGTGT	4122	False	NA	-5	True	AATAAA	-24	NA	21980200	21878209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995
ENSMUST00000115390.5	chr17	-	4133	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	2022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTTCTATCCCAAATAT	8675	False	NA	NA	False	NA	NA	NA	24470383	24441171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ENSMUST00000115397.8	chr16	+	5032	47	FSM	ENSMUSG00000033653.19	ENSMUST00000115397.8	5032	47	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_7	28.353993727559	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTCTTGGTTGTCA	NA	False	NA	21	True	AATAAA	-27	NA	21241867	21463430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267158_21274976_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ENSMUST00000115414.3	chr9	+	3606	18	FSM	ENSMUSG00000032178.15	ENSMUST00000115414.3	3606	18	0	0	0	0	multi-exon	FALSE	canonical	3	922	junction_17	371.198684895057	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTTGAGTCTTCATTCA	NA	False	NA	32	True	AATACA	-21	NA	21279298	21313099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ENSMUST00000115441.9	chr5	-	2972	10	FSM	ENSMUSG00000040464.16	ENSMUST00000115441.9	2972	10	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_5	43.7924397331066	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTCTGTTCCTAATG	NA	False	NA	NA	False	GATAAA	-19	NA	5609538	5587453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
ENSMUST00000115446.8	chr5	-	3519	4	FSM	ENSMUSG00000046798.15	ENSMUST00000115446.8	3519	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.5841028929991	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGTCTCTGTCCTTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	5564825	5555110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_5558455_5561070_5561123_5563161_5563224_5564764
ENSMUST00000115457.8	chr16	+	5440	33	FSM	ENSMUSG00000045983.17	ENSMUST00000115457.8	5440	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	352.05208687778	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491572	20511634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_20491627_20492348_20492406_20492617_20492712_20492917_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ENSMUST00000115467.11	chr6	+	2440	7	FSM	ENSMUSG00000029552.20	ENSMUST00000115467.11	2440	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	5.93717104351896	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGTCTTTCTATGTC	-34	True	NA	NA	False	AATAAA	-15	NA	17065147	17105822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17104591
ENSMUST00000115487.3	chr9	-	3470	13	FSM	ENSMUSG00000010205.12	ENSMUST00000115487.3	3470	13	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_7	41.8140725912541	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003304	20985453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ENSMUST00000115490.9	chr17	-	1431	14	FSM	ENSMUSG00000041319.15	ENSMUST00000115490.9	1431	14	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_13	116.170706876108	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTGCATTTTATTCC	765	False	NA	-22	True	AATAAA	-13	NA	23892845	23887592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892814
ENSMUST00000115494.3	chr9	-	1010	5	FSM	ENSMUSG00000079681.4	ENSMUST00000115494.3	1010	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTTTAATTATGTTTT	921	False	NA	NA	False	AATAAA	-21	NA	20978389	20973688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20974014_20974189_20974284_20974609_20974693_20977319_20977674_20978235
ENSMUST00000115509.8	chr17	+	2368	4	FSM	ENSMUSG00000023902.19	ENSMUST00000115509.8	2368	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	114.030210422014	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTCCTGATTTTTT	879	False	NA	28	True	AGTAAA	-12	NA	23819829	23829986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_23819934_23824478_23824939_23827081_23827140_23828240
ENSMUST00000115516.11	chr17	-	2104	6	FSM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_1	5.98665181883831	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGCTCTGTGTGCTTG	4823	False	NA	0	True	ATTAAA	-21	NA	23805206	23794817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
ENSMUST00000115519.8	chr6	-	1706	13	FSM	ENSMUSG00000062995.13	ENSMUST00000115519.8	1706	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.8373595353145	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTCACTCCTGTTTGGT	-20	True	NA	-1	True	AATAAA	-35	NA	8778154	8630526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_8630798_8643972_8644243_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365_8758459_8778071
ENSMUST00000115522.10	chr16	+	1134	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	23	1584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTGCTTTATGCTTCTG	5899	False	NA	12	True	NA	NA	NA	20430342	20437761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_20430571_20436375_20436660_20437139
ENSMUST00000115524.8	chrX	+	2022	2	FSM	ENSMUSG00000008035.13	ENSMUST00000115524.8	2022	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACTGGACAAGTGTG	1479	False	NA	NA	False	AATAAA	-15	NA	10583628	10585929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_10583944_10584222
ENSMUST00000115529.8	chr1	+	930	8	FSM	ENSMUSG00000025903.15	ENSMUST00000115529.8	930	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	273.277312991617	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGGTAAGATGTAAGTG	NA	False	NA	NA	False	NA	NA	NA	4878133	4915575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4911178_4911356_4915185
ENSMUST00000115535.3	chr17	-	2784	6	FSM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	24.8997991959775	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22580381	22556969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577970_22578420_22578506_22580148
ENSMUST00000115542.8	chr6	-	2016	12	FSM	ENSMUSG00000029752.13	ENSMUST00000115542.8	2016	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	2480.9262599759	26071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	14	True	NA	-9	True	AATAAA	-17	NA	7692871	7675168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7692710
ENSMUST00000115578.10	chr16	+	2078	13	FSM	ENSMUSG00000005262.14	ENSMUST00000115578.10	2078	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	131.578240348978	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGTTTGATATGGTAT	NA	False	NA	5	True	AATAAA	-15	NA	18630581	18654006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18630634_18631008_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUST00000115579.8	chr6	-	1696	11	FSM	ENSMUSG00000004631.16	ENSMUST00000115579.8	1696	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	4.92848861214064	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGTAAAATTTCTTTC	9868	False	NA	NA	False	AATAAA	-36	NA	4747204	4674349	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4690468_4690496_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4719373_4719497_4746979
ENSMUST00000115594.8	chrX	-	1529	13	FSM	ENSMUSG00000031171.12	ENSMUST00000115594.8	1529	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	84.1872912024137	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCACGTTGCTTACTT	NA	False	NA	-14	True	AATAAA	-21	NA	8118549	8106658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8107070_8111298_8111341_8111522_8111670_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ENSMUST00000115595.8	chrX	-	1656	13	FSM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_4	23.6231995198694	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCACGTTGCTTACTT	NA	False	NA	-14	True	AATAAA	-21	NA	8118634	8106658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ENSMUST00000115606.9	chr16	+	1905	18	FSM	ENSMUSG00000075704.18	ENSMUST00000115606.9	1905	18	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_11	21.0007414599702	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCGTGTGCTGTCCCC	NA	False	NA	NA	False	AATAAA	-21	NA	18245166	18297823	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262025_18272470_18272491_18273238_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ENSMUST00000115615.9	chrX	-	1183	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115615.9	1183	7	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	305.254766092558	8451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGATAATGCTTTTTC	6535	False	NA	-9	True	ATTAAA	-23	NA	8011962	8008599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUST00000115616.8	chrX	-	1225	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115616.8	1225	7	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_2	255.122192945524	9396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATCAATACTGATAATG	6485	False	NA	-16	True	ATTAAA	-16	NA	8012012	8008606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8009195_8009489_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUST00000115617.10	chrX	-	1152	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115617.10	1152	7	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	339.486213105759	6597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATCAATACTGATAATG	6562	False	NA	-16	True	ATTAAA	-16	NA	8011935	8008606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8009195_8009485_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUST00000115621.9	chrX	-	1338	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115621.9	1338	7	0	0	0	0	multi-exon	FALSE	canonical	3	764	junction_2	192.247597875471	10344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATAATGCTTTTTCCT	6378	False	NA	-7	True	ATTAAA	-25	NA	8012119	8008597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUST00000115628.10	chr16	-	1622	9	FSM	ENSMUSG00000013539.15	ENSMUST00000115628.10	1622	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	57.8273291792038	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTGTTGGCTTTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	18161906	18118690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161758
ENSMUST00000115637.8	chrX	-	2778	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_5	15.551205741035	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTGAGATTTGGGAG	7355	False	NA	NA	False	NA	NA	NA	7940497	7927673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940354
ENSMUST00000115640.8	chr16	+	2367	12	FSM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	22.0168980933485	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	269	False	NA	8	True	AATAAA	-22	NA	18066746	18071366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ENSMUST00000115642.8	chrX	-	4069	29	FSM	ENSMUSG00000031161.16	ENSMUST00000115642.8	4069	29	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_28	46.7627942767691	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGCTTTTTTTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	7814128	7796358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ENSMUST00000115645.10	chr16	-	1085	6	FSM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	0	0	0	0	multi-exon	FALSE	canonical	3	10558	junction_4	1553.51498222579	17731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTGACAAGGCTATGTG	7133	False	NA	-1	True	AATAAA	-22	NA	18066596	18057647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ENSMUST00000115655.8	chrX	-	1148	7	FSM	ENSMUSG00000031157.11	ENSMUST00000115655.8	1148	7	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_6	78.4950458450864	1724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTGTTGTTTGTAAACA	586	False	NA	-65	True	NA	NA	NA	7765218	7760821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765009
ENSMUST00000115663.10	chrX	+	1527	5	FSM	ENSMUSG00000031156.19	ENSMUST00000115663.10	1527	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	39.7586468582622	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGTTGGAAAGCCTGGA	NA	False	NA	NA	False	AATAAA	-20	NA	7750482	7760703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758378_7759107_7760429
ENSMUST00000115677.8	chrX	+	2943	10	FSM	ENSMUSG00000000134.18	ENSMUST00000115677.8	2943	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	93.7669820010234	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	24	True	AATAAA	-35	NA	7630197	7641440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7630268_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUST00000115679.8	chrX	+	3239	10	FSM	ENSMUSG00000000134.18	ENSMUST00000115679.8	3239	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	88.3978101510788	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	24	True	AATAAA	-35	NA	7628914	7641440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7629300_7631745_7631860_7632812_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUST00000115687.8	chrX	+	1299	11	FSM	ENSMUSG00000039382.13	ENSMUST00000115687.8	1299	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	65.9799969687784	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGCACTTTTTGTGACTG	4716	False	NA	11	True	AATAAA	-13	NA	7589165	7594242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7589221_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ENSMUST00000115688.8	chrX	+	1510	11	FSM	ENSMUSG00000039382.13	ENSMUST00000115688.8	1510	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	67.1240642392875	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCATTTATGACTTGACC	4039	False	NA	-2	True	AATAAA	-11	NA	7588488	7594421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593450_7593511_7593585_7593732_7593988
ENSMUST00000115689.10	chrX	+	1568	11	FSM	ENSMUSG00000039382.13	ENSMUST00000115689.10	1568	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	58.911883351324	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAAGGGTGGGGCGTGCTT	4038	False	NA	17	True	AATAAA	-30	NA	7588487	7594440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7588618_7590091_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ENSMUST00000115731.10	chr16	+	1747	8	FSM	ENSMUSG00000063358.18	ENSMUST00000115731.10	1747	8	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_5	32.3728281124773	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACATTTAAAAATA	NA	False	NA	NA	False	AATATA	-5	NA	16801430	16856904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177
ENSMUST00000115749.3	chr16	-	3893	20	FSM	ENSMUSG00000022789.16	ENSMUST00000115749.3	3893	20	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_19	330.475926430562	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176397	16130101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176362
ENSMUST00000115766.8	chr18	-	4258	21	FSM	ENSMUSG00000003778.15	ENSMUST00000115766.8	4258	21	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_11	140.007142674936	94567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAACTAGTATGACCC	NA	False	NA	NA	False	AATAAA	-17	NA	34757654	34731667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ENSMUST00000115776.2	chr16	-	1236	3	FSM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	698.5	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGACTATCAAAGACTT	NA	False	NA	NA	False	AAGAAA	-4	NA	15412371	15373368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_15374408_15398922_15399072_15412323
ENSMUST00000115777.10	chr16	-	4207	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	4365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTTGTGTGTGCCTGTG	NA	False	NA	-4	True	AATAAA	-17	NA	15412388	15370540	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ENSMUST00000115795.9	chr16	+	2335	9	FSM	ENSMUSG00000022678.17	ENSMUST00000115795.9	2335	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	91.5818452260054	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAAAAGTGTTTTGTG	NA	False	NA	86	True	AATAAA	-8	NA	13981208	14010782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009453
ENSMUST00000115804.9	chr16	-	2880	23	FSM	ENSMUSG00000022680.15	ENSMUST00000115804.9	2880	23	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	45.2457020469238	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGCTTTTGTTGCTGT	9804	False	NA	-17	True	NA	NA	NA	13720885	13652023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_13652711_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ENSMUST00000115805.3	chr16	+	984	9	FSM	ENSMUSG00000022681.16	ENSMUST00000115805.3	984	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	226.530902969109	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTAGATGACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	13637188	13653312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652998
ENSMUST00000115844.3	chr16	-	3292	16	FSM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_6	120.52477845747	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8116	False	NA	-8	True	AATAAA	-13	NA	4867721	4831772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ENSMUST00000115851.10	chr16	-	1306	5	FSM	ENSMUSG00000063445.15	ENSMUST00000115851.10	1306	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	76.6811580507233	1364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTTCCCAAAAGAAAAGG	4796	False	NA	-6	True	AATAAA	-18	NA	4537020	4529180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4529545_4531503_4531695_4532280_4532531_4534160_4534400_4536758
ENSMUST00000115854.4	chr16	+	2505	11	FSM	ENSMUSG00000004069.18	ENSMUST00000115854.4	2505	11	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_10	58.1896898084188	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	35	True	TTTAAA	-8	NA	4501959	4525559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ENSMUST00000115869.4	chr18	-	4981	17	FSM	ENSMUSG00000057440.9	ENSMUST00000115869.4	4981	17	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_16	22.8061635035356	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCTTTCAAGATTATTG	-22	True	NA	NA	False	ATTAAA	-20	NA	7626866	7347958	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626732
ENSMUST00000115870.9	chr18	-	3817	14	FSM	ENSMUSG00000024240.14	ENSMUST00000115870.9	3817	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_13	15.1118120655772	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCAGTGGTCTTTGCCTT	NA	False	NA	1	True	AATAAA	-29	NA	6516108	6435950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6515864
ENSMUST00000116058.3	chr4	-	393	1	FSM	ENSMUSG00000079942.6	ENSMUST00000116058.3	393	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1346	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCACACCCCGGAAGCAA	NA	False	NA	NA	False	NA	NA	NA	125964052	125963659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_125963700_125964100
ENSMUST00000116115.3	chr3	+	425	1	FSM	ENSMUSG00000100755.2	ENSMUST00000116115.3	425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1451	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATAAAATTTGACAATGG	7664	False	NA	NA	False	AAGAAA	-12	NA	37768888	37769313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_37768900_37769300
ENSMUST00000116279.10	chr4	-	1969	7	FSM	ENSMUSG00000046671.19	ENSMUST00000116279.10	1969	7	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_6	102.782402298361	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTCTTGGTTCATC	NA	False	NA	0	True	ATTAAA	-23	NA	134262698	134252867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
ENSMUST00000116280.9	chr7	-	5382	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATAGTCTTTTGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	118455221	118441444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ENSMUST00000116305.8	chr11	+	1827	14	FSM	ENSMUSG00000025156.18	ENSMUST00000116305.8	1827	14	0	0	0	0	multi-exon	FALSE	canonical	3	682	junction_1	155.049677093711	3172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1424	False	NA	2	True	ATTAAA	-19	NA	120675130	120679928	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUST00000116309.10	chr4	+	1238	11	FSM	ENSMUSG00000028601.19	ENSMUST00000116309.10	1238	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	237.455280000256	3782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGCTGGAATTGTTG	NA	False	NA	23	True	AATAAA	-16	NA	108022662	108036504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103_108036357_108036395
ENSMUST00000116358.8	chr11	+	1159	11	FSM	ENSMUSG00000023170.15	ENSMUST00000116358.8	1159	11	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	67.5763272159711	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGCCTGAGTGCTGTTT	4091	False	NA	11	True	AATAAA	-21	NA	69804875	69807416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69804897_69805098_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ENSMUST00000116359.3	chr11	+	3978	23	FSM	ENSMUSG00000020898.19	ENSMUST00000116359.3	3978	23	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_14	52.8328292942908	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5272	False	NA	18	True	AATAAA	-18	NA	68906922	68927296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ENSMUST00000116363.2	chr11	-	1283	5	FSM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	11.1579568022107	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCTGTTTGTGTACAAA	NA	False	NA	2	True	CATAAA	-28	NA	66943396	66928866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_66929272_66931044_66931162_66932306_66932934_66942506_66942605_66943360
ENSMUST00000116375.2	chr2	+	3451	6	FSM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	74.6527963307471	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGACGTAAAGGTAGTTT	NA	False	NA	13	True	AATAAA	-20	NA	172212653	172224368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
ENSMUST00000116378.8	chr11	-	3069	6	FSM	ENSMUSG00000049321.18	ENSMUST00000116378.8	3069	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	26.1763251813542	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	50806969	50789538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_50792119_50796912_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
ENSMUST00000116380.9	chr2	+	2756	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	0	0	0	0	multi-exon	FALSE	canonical	3	1870	junction_1	194.730412606121	3442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTTCTTCTGTGATAAA	NA	False	NA	20	True	AATAAA	-17	NA	157120978	157168239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ENSMUST00000116403.9	chr13	-	2970	18	FSM	ENSMUSG00000021546.19	ENSMUST00000116403.9	2970	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	2601.31267501967	8863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTTTGTGTGTGTGTG	3924	False	NA	-8	True	AATACA	-15	NA	58551157	58538955	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877_58549932_58550206_58550327_58551084
ENSMUST00000116415.9	chr8	-	1520	9	FSM	ENSMUSG00000031816.16	ENSMUST00000116415.9	1520	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	25.939533052852	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGTATGTTTGTGTAAA	NA	False	NA	-7	True	NA	NA	NA	121835066	121824291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_121824665_121825446_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832456_121832571_121833608_121833713_121835026
ENSMUST00000116420.4	chr12	-	2066	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAATTCAAGGTATTT	NA	False	NA	-6	True	AATAAA	-21	NA	73333483	73326784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
ENSMUST00000116432.2	chr2	-	1674	11	FSM	ENSMUSG00000027246.13	ENSMUST00000116432.2	1674	11	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	7.95235814082842	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCGATCATTAGC	NA	False	NA	-17	True	ATTAAA	-15	NA	121273082	121269507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_121270031_121270107_121270153_121270328_121270501_121270596_121270640_121270714_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
ENSMUST00000116434.11	chr13	-	2600	6	FSM	ENSMUSG00000021327.20	ENSMUST00000116434.11	2600	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	29.6486087363303	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGGTTCTTACTTGGG	NA	False	NA	2	True	AATAAA	-23	NA	21586925	21571172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580745_21586841
ENSMUST00000116440.9	chr15	-	896	7	FSM	ENSMUSG00000055762.17	ENSMUST00000116440.9	896	7	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_6	1385.14264207297	2602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781146	75767336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773102_75781093
ENSMUST00000116456.10	chr5	+	3738	13	FSM	ENSMUSG00000018001.19	ENSMUST00000116456.10	3738	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_12	7.06468132488807	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTAAGACTCAATTCTT	NA	False	NA	5	True	AATAAA	-22	NA	143608201	143696005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_143608429_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149_143693305_143693587
ENSMUST00000116468.2	chr14	+	2939	14	FSM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_4	88.7108193370776	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1778	False	NA	32	True	ATTAAA	-18	NA	56905704	56934887	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ENSMUST00000116514.4	chr6	-	2739	12	FSM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	0	0	0	0	multi-exon	FALSE	canonical	3	1089	junction_11	207.479880534104	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGTGTTTGTGTAATG	2832	False	NA	-1	True	AATAAA	-19	NA	136805231	136790651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ENSMUST00000116515.9	chr6	-	2075	5	FSM	ENSMUSG00000032641.19	ENSMUST00000116515.9	2075	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	27.6981497577004	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTCCTGTGGATTTTGT	NA	False	NA	-3	True	ACTAAA	-34	NA	134874888	134846055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_134847407_134854179_134854298_134864592_134864749_134873820_134874177_134874794
ENSMUST00000116527.2	chrX	+	837	3	FSM	ENSMUSG00000047844.4	ENSMUST00000116527.2	837	3	0	0	0	0	multi-exon	FALSE	canonical	3	2369	junction_2	964	17691	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCAGTCATCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	135039744	135041192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_135039916_135040271_135040349_135040603
ENSMUST00000116528.2	chr1	+	3277	12	FSM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	38.3780670833987	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTAAGAGAATTTGTGGG	NA	False	NA	17	True	ATTAAA	-18	NA	134383292	134418611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_134383404_134386165_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ENSMUST00000116542.9	chr19	-	2100	2	FSM	ENSMUSG00000024742.16	ENSMUST00000116542.9	2100	2	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_1	0	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	2155	False	NA	NA	False	AATAAA	-14	NA	10181307	10176501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10178462_10181167
ENSMUST00000116551.10	chr19	+	985	4	FSM	ENSMUSG00000038812.17	ENSMUST00000116551.10	985	4	0	0	0	0	multi-exon	TRUE	canonical	3	803	junction_1	23.6971634495683	4961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	9314	False	NA	16	True	ATTAAA	-16	NA	6887114	6888396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6887631_6887730_6887833_6887951_6888042_6888119
ENSMUST00000116552.8	chr9	+	888	6	FSM	ENSMUSG00000033543.18	ENSMUST00000116552.8	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	405.059798054559	3298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919847	69930020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69925961_69926101_69926670_69926798_69929718
ENSMUST00000116556.4	chr17	+	1831	11	FSM	ENSMUSG00000024101.16	ENSMUST00000116556.4	1831	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.5182236442885	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGGAGCTGTCCTTTT	NA	False	NA	24	True	AATAAA	-32	NA	66418639	66426442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_66418727_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ENSMUST00000116560.3	chr19	+	1148	6	FSM	ENSMUSG00000056201.9	ENSMUST00000116560.3	1148	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_4	3070.36039578418	7542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGGCTTTTGGGTTTGG	NA	False	NA	12	True	NA	NA	NA	5540512	5544057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408_5543519_5543520_5543527_5543528
ENSMUST00000116567.4	chr19	+	1388	10	FSM	ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	16.1528195757556	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTGATGTGTGGCTG	2730	False	NA	8	True	AATAAA	-19	NA	5091381	5099945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
ENSMUST00000116578.8	chrX	-	1418	11	FSM	ENSMUSG00000031387.15	ENSMUST00000116578.8	1418	11	0	0	0	0	multi-exon	FALSE	canonical	3	1767	junction_7	141.190120050944	5443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974456	72965726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
ENSMUST00000116621.2	chrX	-	908	3	FSM	ENSMUSG00000031059.10	ENSMUST00000116621.2	908	3	0	0	0	0	multi-exon	FALSE	canonical	3	2198	junction_1	70	11602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGTTACTGCTGCTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	20483858	20481564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_20481782_20481952_20482084_20483298
ENSMUST00000116625.10	chr16	+	1094	7	FSM	ENSMUSG00000022871.14	ENSMUST00000116625.10	1094	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	171.730408877791	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGCTTCAACCTG	NA	False	NA	9	True	AATAAA	-15	NA	22739201	22758502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22739246_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ENSMUST00000116641.9	chr17	+	1858	11	FSM	ENSMUSG00000002279.20	ENSMUST00000116641.9	1858	11	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_2	37.5467708331888	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCCTCCTGTCTCTAT	NA	False	NA	107	True	NA	NA	NA	25798150	25881800	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25798354_25804516_25804827_25807649_25807661_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ENSMUST00000116669.2	chr18	-	2019	15	FSM	ENSMUSG00000047879.18	ENSMUST00000116669.2	2019	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_12	235.664107213151	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACACTTGATTATACACT	14	True	NA	-65	True	AATAAA	-15	NA	10030067	9995593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10022817_10022851_10024533_10024680_10029912
ENSMUST00000116685.3	chr5	-	71	1	FSM	ENSMUSG00000118744.1	ENSMUST00000116685.3	71	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAACAGGCAGGAATTTA	6862	False	NA	NA	False	NA	NA	NA	23916059	23915988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_23916000_23916100
ENSMUST00000116811.3	chr15	+	127	1	FSM	ENSMUSG00000080461.3	ENSMUST00000116811.3	127	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCCTATTCATCCACA	7899	False	NA	NA	False	NA	NA	NA	58010011	58010138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_58010000_58010100
ENSMUST00000116965.3	chr4	+	74	1	FSM	ENSMUSG00000080615.3	ENSMUST00000116965.3	74	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGGAAAGCCTGAGTTGG	NA	False	NA	NA	False	NA	NA	NA	132038001	132038075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132038000_132038100
ENSMUST00000117066.8	chr2	+	1712	9	FSM	ENSMUSG00000017721.16	ENSMUST00000117066.8	1712	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_7	35.1212186576719	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCACTGTTAATCATAAA	5127	False	NA	NA	False	ATTAAA	-24	NA	164339454	164345040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397
ENSMUST00000117083.2	chr9	-	1999	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTAGGTCATTTTT	NA	False	NA	-8	True	TATAAA	-12	NA	65792338	65740437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ENSMUST00000117095.8	chr7	-	2282	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_13	66.1410542194063	1217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATGAGATGGTATGTT	NA	False	NA	1	True	AGTAAA	-31	NA	27252637	27231424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
ENSMUST00000117136.2	chr16	-	758	4	FSM	ENSMUSG00000022671.14	ENSMUST00000117136.2	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	237.265439727089	3092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGAGTTCTATGTGGAG	NA	False	NA	-11	True	ATTAAA	-13	NA	15681233	15666313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_15666594_15680261_15680408_15680611_15680797_15681086
ENSMUST00000117146.9	chr1	-	2181	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGTTTCTATGACAATG	NA	False	NA	NA	False	TATAAA	-21	NA	16689713	16640005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ENSMUST00000117171.8	chr6	-	2174	5	FSM	ENSMUSG00000030170.15	ENSMUST00000117171.8	2174	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	2.73861278752583	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTCCCTCTCCTTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	119426347	119409491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_119410818_119417242_119417536_119423295_119423544_119425096_119425234_119426177
ENSMUST00000117189.2	chr7	+	2995	2	FSM	ENSMUSG00000054715.12	ENSMUST00000117189.2	2995	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGGCTTCTCCAACATC	NA	False	NA	30	True	AATAAA	-41	NA	12631762	12643010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_12631908_12640160
ENSMUST00000117196.9	chr5	+	2864	11	FSM	ENSMUSG00000029283.18	ENSMUST00000117196.9	2864	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	74.2377262582846	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107112187	107132297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ENSMUST00000117220.8	chr16	+	1230	10	FSM	ENSMUSG00000039200.17	ENSMUST00000117220.8	1230	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	25.7557377042739	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTCAGAAGCTACAAAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	10010785	10058678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424
ENSMUST00000117236.8	chr14	+	2538	15	FSM	ENSMUSG00000022214.16	ENSMUST00000117236.8	2538	15	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_1	36.2303430166213	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTCTGTGTCACTTT	NA	False	NA	14	True	AATAAA	-19	NA	55797462	55807522	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55797579_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUST00000117249.2	chr5	+	1036	2	FSM	ENSMUSG00000106943.3	ENSMUST00000117249.2	1036	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	2433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTCACTTGTTCT	NA	False	NA	18	True	AATAAA	-20	NA	74253743	74254997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_74253801_74254018
ENSMUST00000117268.9	chr4	-	3266	7	FSM	ENSMUSG00000040550.18	ENSMUST00000117268.9	3266	7	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCAAATTGTCATTTGT	-2	True	NA	9	True	AATAAA	-28	NA	14826587	14809497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ENSMUST00000117280.8	chr4	+	5328	25	FSM	ENSMUSG00000028312.20	ENSMUST00000117280.8	5328	25	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	79.8595990195014	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	-19	True	NA	21	True	ATTAAA	-21	NA	52439242	52488260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_52439335_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ENSMUST00000117291.8	chr10	+	3669	28	FSM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_27	39.2310170953031	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTCAGCTAGTAAAGCCA	NA	False	NA	14	True	AATAAA	-19	NA	3923117	4106111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ENSMUST00000117299.10	chr2	-	747	4	FSM	ENSMUSG00000076437.12	ENSMUST00000117299.10	747	4	0	0	0	0	multi-exon	FALSE	canonical	3	1785	junction_1	271.099407761966	14909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTTTAAATTTTGTCTT	296	False	NA	-8	True	AATAAA	-25	NA	84501114	84499558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_84499742_84500330_84500461_84500588_84500735_84500826
ENSMUST00000117355.2	chr3	-	1756	9	FSM	ENSMUSG00000005625.16	ENSMUST00000117355.2	1756	9	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_2	388.88942435479	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTTTTGCTTCAAATAG	NA	False	NA	-21	True	AATAAA	-14	NA	94949854	94940015	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ENSMUST00000117356.2	chr6	-	213	1	FSM	ENSMUSG00000080921.5	ENSMUST00000117356.2	213	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1937	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCCTCTGCGTGTGAC	NA	False	NA	NA	False	NA	NA	NA	140692898	140692685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_140692700_140692900
ENSMUST00000117361.8	chr18	-	2687	14	FSM	ENSMUSG00000044252.19	ENSMUST00000117361.8	2687	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	98.4808875218973	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996437	12888384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996199
ENSMUST00000117364.8	chr5	-	1657	10	FSM	ENSMUSG00000035234.19	ENSMUST00000117364.8	1657	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	36.8299395118217	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTAAAGTTTGTAAT	NA	False	NA	-14	True	AATAAA	-8	NA	100968806	100953068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_100953318_100953763_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ENSMUST00000117388.8	chr5	-	2564	11	FSM	ENSMUSG00000029228.16	ENSMUST00000117388.8	2564	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	3.95474398665704	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTAGAGGATTTCTT	NA	False	NA	1	True	AATAAA	-19	NA	74863573	74757764	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_74758072_74758436_74758596_74766697_74766924_74768397_74768567_74771337_74771473_74780634_74781007_74784142_74784346_74788008_74788162_74788780_74789023_74846056_74846534_74863452
ENSMUST00000117389.8	chr9	+	1952	7	FSM	ENSMUSG00000042496.19	ENSMUST00000117389.8	1952	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	4.53688586293873	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATGAGCATTCTTGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	31191833	31241914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957
ENSMUST00000117399.2	chrX	+	3842	13	FSM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	0	0	0	0	multi-exon	FALSE	canonical	3	982	junction_10	94.3325971702724	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGACTCAGTCTTTCTG	NA	False	NA	6	True	AATAAA	-16	NA	95139647	95212158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ENSMUST00000117411.8	chr6	+	933	7	FSM	ENSMUSG00000029911.15	ENSMUST00000117411.8	933	7	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	935.620961358462	1738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTGGTTATATTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	40448408	40457926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_40448760_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ENSMUST00000117425.8	chr5	-	1231	7	FSM	ENSMUSG00000015806.13	ENSMUST00000117425.8	1231	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	385.068680742655	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	-19	True	AATAAA	-15	NA	45605515	45591394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45605434
ENSMUST00000117449.8	chr12	+	1874	7	FSM	ENSMUSG00000005078.17	ENSMUST00000117449.8	1874	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	199.890525593942	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTCTGATAATTCT	NA	False	NA	14	True	AATAAA	-20	NA	72132630	72148235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUST00000117468.8	chr16	-	2887	11	FSM	ENSMUSG00000022604.19	ENSMUST00000117468.8	2887	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	12.5395374715338	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGGCATATGCACTTT	NA	False	NA	NA	False	ACTAAA	-12	NA	55754596	55725340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55754427
ENSMUST00000117536.8	chr5	+	1862	10	FSM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	1007.72571224074	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGGGATCTGACCCCAT	347	False	NA	9	True	NA	NA	NA	77099214	77115160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_77099249_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUST00000117544.2	chrX	-	2201	1	FSM	ENSMUSG00000073294.5	ENSMUST00000117544.2	2201	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTTGTTGTGGTACAA	NA	False	NA	1	True	AATAAA	-24	NA	5995473	5993272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_5993300_5995500
ENSMUST00000117557.8	chr9	+	2019	9	FSM	ENSMUSG00000015656.18	ENSMUST00000117557.8	2019	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7062.92189779662	9737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2485	False	NA	10	True	AATAAA	-20	NA	40712597	40716496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_40712645_40713213_40713424_40713713_40713920_40714091_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ENSMUST00000117563.2	chr9	-	472	1	FSM	ENSMUSG00000080848.4	ENSMUST00000117563.2	472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3608	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGGTAGAGCAGAGTT	NA	False	NA	-63	True	NA	NA	NA	115870132	115869660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_115869700_115870100
ENSMUST00000117571.2	chr6	+	333	1	FSM	ENSMUSG00000095526.3	ENSMUST00000117571.2	333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1527	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAATGGAGAGTAAATAAA	NA	False	NA	NA	False	NA	NA	NA	48500451	48500784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_48500500_48500800
ENSMUST00000117583.8	chr6	+	950	8	FSM	ENSMUSG00000029993.17	ENSMUST00000117583.8	950	8	0	0	0	0	multi-exon	FALSE	canonical	3	2373	junction_7	253.923417669218	6073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTGCTTCCTCTCACG	NA	False	NA	23	True	AATAAA	-29	NA	86986817	87005441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ENSMUST00000117598.8	chr16	+	4935	47	FSM	ENSMUSG00000033653.19	ENSMUST00000117598.8	4935	47	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	17.1577937561462	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGCCTGCCAGTCTCTT	NA	False	NA	13	True	AATAAA	-19	NA	21241950	21463422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ENSMUST00000117600.9	chr17	+	1595	5	FSM	ENSMUSG00000046711.17	ENSMUST00000117600.9	1595	5	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_4	1949.43562345618	11100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	27775626	27782644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_27775686_27778506_27778678_27779901_27779986_27780434_27780486_27781414
ENSMUST00000117637.8	chrX	-	1593	6	FSM	ENSMUSG00000031310.17	ENSMUST00000117637.8	1593	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	47.004680617998	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCAGCCTCTCCTT	NA	False	NA	-4	True	NA	NA	NA	100463447	100458538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_100459013_100459366_100459545_100460514_100460588_100460892_100460937_100461878_100462559_100463303
ENSMUST00000117638.2	chr4	-	2885	4	FSM	ENSMUSG00000062518.8	ENSMUST00000117638.2	2885	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	89.2238134630486	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	147787010	147757958	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147760511_147762673_147762801_147766723_147766828_147786908
ENSMUST00000117644.8	chr16	-	1727	12	FSM	ENSMUSG00000058240.15	ENSMUST00000117644.8	1727	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	525.741459887489	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTTTTTAAATATTCA	9001	False	NA	NA	False	NA	NA	NA	91525690	91486229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUST00000117672.9	chr17	+	2162	7	FSM	ENSMUSG00000005936.20	ENSMUST00000117672.9	2162	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	191.759760000777	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTCTCTCCAGTATTG	NA	False	NA	2	True	AATAAA	-13	NA	29171654	29186903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29171732_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ENSMUST00000117710.2	chr11	+	580	2	FSM	ENSMUSG00000020267.7	ENSMUST00000117710.2	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	4806	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCATGTCCTTGGGGGTC	NA	False	NA	NA	False	AATGAA	-36	NA	54757306	54761133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_54757427_54760673
ENSMUST00000117713.8	chr16	-	1964	6	FSM	ENSMUSG00000004071.14	ENSMUST00000117713.8	1964	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	194.363988434072	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCCTCTGCTGTCTTG	NA	False	NA	-19	True	ATTAAA	-21	NA	4607794	4585202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4586514_4586608_4586832_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ENSMUST00000117757.9	chr6	-	1273	7	FSM	ENSMUSG00000057666.19	ENSMUST00000117757.9	1273	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4049.97499649346	79019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125143430	125138815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125143356
ENSMUST00000117766.8	chr5	+	3556	10	FSM	ENSMUSG00000029486.14	ENSMUST00000117766.8	3556	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	227.998429710858	2468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTGTATGAGTATTT	NA	False	NA	NA	False	ATTAAA	-33	NA	96357351	96414586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_96357425_96357939_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ENSMUST00000117786.9	chr15	-	2695	11	FSM	ENSMUSG00000022433.22	ENSMUST00000117786.9	2695	11	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_10	149.550794046705	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCCTCTGTCTGCCTCT	8156	False	NA	-4	True	AATAAA	-24	NA	79326200	79302055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79326127
ENSMUST00000117812.8	chr7	-	3039	6	FSM	ENSMUSG00000030452.17	ENSMUST00000117812.8	3039	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	82.412620392753	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGTTTCCCAGCCC	NA	False	NA	-20	True	AATAAA	-16	NA	55612187	55581034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611947
ENSMUST00000117828.9	chr18	-	1962	9	FSM	ENSMUSG00000002475.17	ENSMUST00000117828.9	1962	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.63145976158349	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTTTGTGAGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	10706771	10644410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_10645236_10647725_10647892_10647969_10648019_10652187_10652362_10658779_10658893_10682068_10682115_10704547_10704731_10706000_10706165_10706529
ENSMUST00000117831.8	chr19	-	1378	7	FSM	ENSMUSG00000024847.16	ENSMUST00000117831.8	1378	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	105.801307490346	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATCTTGAAGGCTGGTCA	9616	False	NA	-3	True	TATAAA	-35	NA	4175858	4164445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335_4171546_4175729
ENSMUST00000117836.8	chr16	+	1099	7	FSM	ENSMUSG00000022971.19	ENSMUST00000117836.8	1099	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	3.19722101554181	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGGCTCTGTCTCTAAT	NA	False	NA	8	True	AATAAA	-20	NA	91169737	91190928	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644
ENSMUST00000117851.2	chr11	-	599	1	FSM	ENSMUSG00000083992.2	ENSMUST00000117851.2	599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1657	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAATAAAGACTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	86521852	86521253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_86521300_86521900
ENSMUST00000117878.8	chr5	+	2931	9	FSM	ENSMUSG00000041264.17	ENSMUST00000117878.8	2931	9	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_8	110.241141934398	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTTTCATTTTGT	NA	False	NA	15	True	ATTAAA	-15	NA	149121525	149152243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ENSMUST00000117890.8	chr17	+	1641	7	FSM	ENSMUSG00000024160.17	ENSMUST00000117890.8	1641	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	37.7388688519174	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTCTATTGTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	25105616	25111123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25105735_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ENSMUST00000117891.2	chr16	-	372	1	FSM	ENSMUSG00000089814.2	ENSMUST00000117891.2	372	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1085	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTTCCAGTCATTGT	NA	False	NA	NA	False	NA	NA	NA	94160171	94159799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_94159800_94160200
ENSMUST00000117892.2	chr15	+	2536	3	FSM	ENSMUSG00000081534.4	ENSMUST00000117892.2	2536	3	0	0	0	0	multi-exon	TRUE	canonical	3	145	junction_2	1	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTTTTTTTTTCACT	NA	False	NA	17	True	AATAAA	-18	NA	97682235	97690573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_97682498_97687783_97687952_97688467
ENSMUST00000117945.8	chr16	-	4003	10	FSM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	0	0	0	0	multi-exon	TRUE	canonical	3	236	junction_7	73.3575717518876	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709524	17658218	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ENSMUST00000117958.8	chr16	+	1551	9	FSM	ENSMUSG00000022678.17	ENSMUST00000117958.8	1551	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	96.6681662958391	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAATCCCTGCTCAAT	NA	False	NA	-4	True	AATAAA	-9	NA	13981150	14010692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14010205
ENSMUST00000117989.2	chr7	+	1317	3	FSM	ENSMUSG00000047084.9	ENSMUST00000117989.2	1317	3	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	14	2283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTTGCTTGGTTCTCT	NA	False	NA	13	True	AATAAA	-13	NA	79910962	79915122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79911172_79911568_79911680_79914125
ENSMUST00000118001.8	chr17	+	1652	7	FSM	ENSMUSG00000014767.18	ENSMUST00000118001.8	1652	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	125.630963097832	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGCTTGTCTGTT	NA	False	NA	23	True	AAGAAA	-31	NA	15720171	15737689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15735877_15735973_15736965
ENSMUST00000118012.9	chr2	+	1213	4	FSM	ENSMUSG00000078877.12	ENSMUST00000118012.9	1213	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	11.7284080571728	332	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTGAGTTCTTCCTGT	NA	False	NA	NA	False	NA	NA	NA	176490404	176500411	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_176490512_176493973_176494029_176499154_176499282_176499487
ENSMUST00000118059.3	chr1	+	1179	6	FSM	ENSMUSG00000026111.16	ENSMUST00000118059.3	1179	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	196.480635178126	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	37469282	37478068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_37469509_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ENSMUST00000118097.8	chr5	-	1232	7	FSM	ENSMUSG00000015806.13	ENSMUST00000118097.8	1232	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	385.068680742655	1852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	-19	True	AATAAA	-15	NA	45607513	45591394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607431
ENSMUST00000118108.2	chr2	-	1431	8	FSM	ENSMUSG00000070953.14	ENSMUST00000118108.2	1431	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	117.809081109381	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCCCACATTTGTATTA	2821	False	NA	-42	True	NA	NA	NA	34689740	34669248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689434
ENSMUST00000118134.3	chr8	-	3148	21	FSM	ENSMUSG00000037300.20	ENSMUST00000118134.3	3148	21	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_17	74.4114238541368	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGTGGTCAGTTTGGTC	NA	False	NA	-11	True	ATTAAA	-13	NA	125448722	125398073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ENSMUST00000118155.8	chr11	-	884	3	FSM	ENSMUSG00000020738.17	ENSMUST00000118155.8	884	3	0	0	0	0	multi-exon	FALSE	canonical	2	199	junction_1	1955	3680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTCTTTATTCTGAA	NA	False	NA	-51	True	AATAAA	-18	NA	115427007	115413927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115414596_115425377_115425510_115426923
ENSMUST00000118190.2	chr7	+	1391	3	FSM	ENSMUSG00000038646.14	ENSMUST00000118190.2	1391	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	414	2886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAACTTTACCTTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	81413030	81419228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_81413113_81417274_81417472_81418116
ENSMUST00000118193.8	chr15	+	1671	5	FSM	ENSMUSG00000022151.17	ENSMUST00000118193.8	1671	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	36.9323706252388	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTCCTTTTATTCTT	NA	False	NA	31	True	AGTAAA	-31	NA	5215005	5247817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_5215054_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ENSMUST00000118198.8	chr9	+	893	5	FSM	ENSMUSG00000033543.18	ENSMUST00000118198.8	893	5	0	0	0	0	multi-exon	FALSE	canonical	3	697	junction_3	95.7131129992124	3757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTGAATATACCAGAAG	NA	False	NA	NA	False	AATAAA	-34	NA	69919831	69930148	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69926670_69926798_69929718
ENSMUST00000118199.8	chr4	+	1915	6	FSM	ENSMUSG00000028779.17	ENSMUST00000118199.8	1915	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	92.1767866656242	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTCTTGACTGTGTGTC	4280	False	NA	26	True	AATAAA	-33	NA	129996350	130021928	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129996521_130001155_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ENSMUST00000118224.2	chr5	-	399	1	FSM	ENSMUSG00000084235.3	ENSMUST00000118224.2	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCCTCTGCTTGTAATAC	NA	False	NA	-97	True	NA	NA	NA	22733717	22733318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_22733300_22733700
ENSMUST00000118248.2	chr2	+	480	1	FSM	ENSMUSG00000082399.2	ENSMUST00000118248.2	480	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	989	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGACTCCTGCCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	134645868	134646348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_134645900_134646300
ENSMUST00000118252.2	chr18	+	640	1	FSM	ENSMUSG00000080866.2	ENSMUST00000118252.2	640	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATGCATAGTGTAATA	NA	False	NA	NA	False	GGGGCT	-44	NA	13031483	13032123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_13031500_13032100
ENSMUST00000118261.8	chr5	+	3129	12	FSM	ENSMUSG00000029283.18	ENSMUST00000118261.8	3129	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	77.2190187680738	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107112426	107132297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_107112700_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ENSMUST00000118272.2	chr7	+	389	1	FSM	ENSMUSG00000081565.2	ENSMUST00000118272.2	389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	579	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTTTTGCTCAAAAAA	NA	False	NA	NA	False	AAGAAA	-4	NA	29962687	29963076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_29962700_29963100
ENSMUST00000118283.8	chr17	-	1388	3	FSM	ENSMUSG00000047407.18	ENSMUST00000118283.8	1388	3	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	292	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	78	True	AATAAA	-20	NA	71160541	71151205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_71152268_71153166_71153394_71160442
ENSMUST00000118287.9	chr15	+	3129	25	FSM	ENSMUSG00000023007.16	ENSMUST00000118287.9	3129	25	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_20	24.7694578395787	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCTACAACTCCTTTGT	NA	False	NA	33	True	TTTAAA	-14	NA	99201164	99214888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ENSMUST00000118305.8	chrX	+	1684	3	FSM	ENSMUSG00000046180.12	ENSMUST00000118305.8	1684	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.5	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCAGCAGTGTTTGTTC	NA	False	NA	13	True	AATAAA	-18	NA	57954719	57965664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_57954780_57956768_57956922_57964193
ENSMUST00000118307.2	chr11	-	348	1	FSM	ENSMUSG00000083061.2	ENSMUST00000118307.2	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	604	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAAAGTTTTCCTTTAA	NA	False	NA	NA	False	NA	NA	NA	49569884	49569536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_49569500_49569900
ENSMUST00000118310.8	chr16	+	1700	5	FSM	ENSMUSG00000044442.12	ENSMUST00000118310.8	1700	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	45.8768732587564	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGCCTTTGTGTAGC	NA	False	NA	1	True	AATAAA	-26	NA	87151114	87165630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87164352
ENSMUST00000118368.8	chr11	-	696	6	FSM	ENSMUSG00000020415.17	ENSMUST00000118368.8	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	3753.79296179211	14421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTCAGATTGTGAATA	NA	False	NA	-35	True	AATAAA	-11	NA	43317044	43311099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317015
ENSMUST00000118374.8	chr14	-	1726	8	FSM	ENSMUSG00000034194.19	ENSMUST00000118374.8	1726	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_7	41.9007573844168	635	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGATTGCGTCCAAGTG	NA	False	NA	-6	True	AATAAA	-15	NA	69945033	69934755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944954
ENSMUST00000118420.8	chr5	+	843	4	FSM	ENSMUSG00000034211.15	ENSMUST00000118420.8	843	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	354.785381134379	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCCCCCAAAGAAATCTT	761	False	NA	-60	True	NA	NA	NA	129792567	129795461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129792614_129792747_129792923_129793790_129793931_129794979
ENSMUST00000118466.8	chr14	-	1567	6	FSM	ENSMUSG00000021792.16	ENSMUST00000118466.8	1567	6	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	66.6111101844129	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATCACCTCTGTGCACA	NA	False	NA	-22	True	AATAAA	-11	NA	40735745	40715696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726178_40735654
ENSMUST00000118487.8	chr17	-	2629	12	FSM	ENSMUSG00000024187.16	ENSMUST00000118487.8	2629	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	57.0232662389834	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCAGCGTGAGCCTGC	2001	False	NA	-20	True	AATAAA	-28	NA	26463115	26431686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462979
ENSMUST00000118493.8	chr7	+	922	6	FSM	ENSMUSG00000038695.14	ENSMUST00000118493.8	922	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	23.6016948543955	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGCCTCAATAAATCTG	4834	False	NA	-7	True	NA	NA	NA	44117495	44121045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44117615_44117729_44117842_44118230_44118394_44119835_44119962_44120536_44120732_44120838
ENSMUST00000118498.8	chr10	-	2841	14	FSM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_4	76.7224306246012	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCCAGGTGTCCTGAG	NA	False	NA	-30	True	AATAAA	-18	NA	81332160	81322290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ENSMUST00000118501.8	chr7	-	684	6	FSM	ENSMUSG00000030417.16	ENSMUST00000118501.8	684	6	0	0	0	0	multi-exon	FALSE	canonical	3	1740	junction_2	86.0883267348135	4389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGATCTGCATTTTG	NA	False	NA	NA	False	NA	NA	NA	35346946	35341406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_35341611_35342039_35342112_35343048_35343141_35343775_35343838_35345568_35345607_35346730
ENSMUST00000118504.9	chr17	-	2474	16	FSM	ENSMUSG00000024039.16	ENSMUST00000118504.9	2474	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_15	69.6264317626575	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCGTGTCGACCTTATTT	1872	False	NA	-16	True	NA	NA	NA	31856212	31831613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852126_31856056
ENSMUST00000118515.9	chr7	-	1662	8	FSM	ENSMUSG00000008140.19	ENSMUST00000118515.9	1662	8	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	346.110162950988	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTGCCTTCTGTGCTTG	NA	False	NA	-1	True	ATTAAA	-31	NA	44145830	44139534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44140395_44140586_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ENSMUST00000118535.9	chr8	+	1419	8	FSM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	133.326360361884	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTACACTGTCCTGCTC	NA	False	NA	12	True	AATAAA	-21	NA	124532723	124562026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753_124560887_124561432
ENSMUST00000118539.2	chr3	-	1815	12	FSM	ENSMUSG00000028179.13	ENSMUST00000118539.2	1815	12	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_5	60.9754048777046	4333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCCTGATCCTACTTT	NA	False	NA	-16	True	AATAAA	-18	NA	157630714	157599884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
ENSMUST00000118543.8	chr5	-	1193	5	FSM	ENSMUSG00000047215.15	ENSMUST00000118543.8	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	9546	junction_4	1705.30515964152	4712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548348	65545706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288
ENSMUST00000118551.8	chr18	+	602	5	FSM	ENSMUSG00000024608.12	ENSMUST00000118551.8	602	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	11592.6756914657	12238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTATTTTGGTTCTGGTGT	NA	False	NA	63	True	AATAAA	-13	NA	60907752	60911613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_60907854_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUST00000118557.8	chr3	+	2424	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_3	9.46337971105226	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCTCAGAAAGGGTCAAAA	NA	False	NA	3	True	AATAAA	-19	NA	96542745	96552682	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
ENSMUST00000118558.5	chr6	-	315	4	FSM	ENSMUSG00000023089.13	ENSMUST00000118558.5	315	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	1436.47492920072	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTCCATGTTATTG	-4	True	NA	-31	True	ATTAAA	-27	NA	24527569	24518664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_24518824_24519190_24519257_24527271_24527317_24527524
ENSMUST00000118590.2	chrX	+	432	1	FSM	ENSMUSG00000081583.2	ENSMUST00000118590.2	432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	395	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCCATGAAGACCAGGACC	NA	False	NA	NA	False	NA	NA	NA	83106938	83107370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_83106900_83107400
ENSMUST00000118623.2	chr19	-	2406	12	FSM	ENSMUSG00000024826.16	ENSMUST00000118623.2	2406	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	287.667249232497	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGCTGGACAGTTTGT	1351	False	NA	-26	True	AATAAA	-14	NA	5962820	5947414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5953758_5953801_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ENSMUST00000118627.2	chr11	-	831	5	FSM	ENSMUSG00000023764.19	ENSMUST00000118627.2	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	37.5724300518346	4544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACACTCTGCACTTTGTT	8018	False	NA	NA	False	NA	NA	NA	3143424	3135567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_3135975_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ENSMUST00000118628.8	chr7	+	864	5	FSM	ENSMUSG00000038695.14	ENSMUST00000118628.8	864	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	14.4460202131937	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTTGTGCCTGGGCTCA	4807	False	NA	20	True	AATAAA	-12	NA	44117468	44121072	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44117615_44118230_44118394_44119835_44119962_44120536_44120732_44120838
ENSMUST00000118703.8	chr16	-	2554	6	FSM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	186.698259231306	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCTATTTTAGACCAT	NA	False	NA	-14	True	AATAAA	-14	NA	4608156	4584704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4608015
ENSMUST00000118729.8	chr15	+	4241	8	FSM	ENSMUSG00000046897.18	ENSMUST00000118729.8	4241	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	56.9883625785805	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCTCTTTGAGAAGACT	906	False	NA	24	True	AATAAA	-25	NA	102112082	102124040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
ENSMUST00000118762.9	chr17	+	3853	7	FSM	ENSMUSG00000005936.20	ENSMUST00000118762.9	3853	7	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	75.1962247870345	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171395	29188523	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29171544_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ENSMUST00000118765.8	chr5	+	713	3	FSM	ENSMUSG00000029462.19	ENSMUST00000118765.8	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	716	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACCTTCCATTTAGAC	732	False	NA	1	True	AATAAA	-1	NA	122492484	122501333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_122492540_122498075_122498268_122500867
ENSMUST00000118784.8	chr11	+	1404	5	FSM	ENSMUSG00000023723.18	ENSMUST00000118784.8	1404	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	110.143939915004	2311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTCTATTTGTGGG	NA	False	NA	19	True	AATAAA	-19	NA	88095236	88102333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_88095407_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ENSMUST00000118788.8	chr17	+	1191	9	FSM	ENSMUSG00000024158.18	ENSMUST00000118788.8	1191	9	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_6	27.6812210713328	1861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTTATGGACTCTTT	NA	False	NA	11	True	AAAAAG	-24	NA	25069463	25083424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
ENSMUST00000118816.6	chr5	-	1307	6	FSM	ENSMUSG00000035505.15	ENSMUST00000118816.6	1307	6	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	54.1833922895199	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGTGAGATAATTTC	NA	False	NA	-4	True	AATAAA	-16	NA	90371831	90362582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218_90367383_90370089_90370191_90371474
ENSMUST00000118821.8	chrX	+	3698	5	FSM	ENSMUSG00000067360.13	ENSMUST00000118821.8	3698	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	43.9964487203229	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCATGAGATTCATTTA	NA	False	NA	NA	False	AGTAAA	-16	NA	134203055	134213401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_134203188_134203385_134203513_134208081_134208382_134209685_134210271_134210847
ENSMUST00000118830.8	chr5	+	1014	5	FSM	ENSMUSG00000029462.19	ENSMUST00000118830.8	1014	5	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_1	833.067074130289	6683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTTCTTGAAAACCTGT	695	False	NA	17	True	AATAAA	-17	NA	122492447	122501349	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_122492540_122494856_122494869_122498075_122498268_122500098_122500335_122500867
ENSMUST00000118833.3	chr5	+	734	3	FSM	ENSMUSG00000015804.15	ENSMUST00000118833.3	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	958.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTTAGACTGTTAGAGT	7406	False	NA	61	True	NA	NA	NA	45677644	45682979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_45677827_45679777_45679845_45682494
ENSMUST00000118869.8	chr9	+	2540	14	FSM	ENSMUSG00000009828.16	ENSMUST00000118869.8	2540	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	29.6118879054586	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGGGTCTCATTATTT	NA	False	NA	3	True	TATAAA	-14	NA	78016473	78075220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_78016764_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ENSMUST00000118875.8	chr6	-	1420	7	FSM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	0	0	0	0	multi-exon	FALSE	canonical	3	6089	junction_1	1931.60920967179	286688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125142736	125138816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
ENSMUST00000118882.2	chr5	-	1984	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	2	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAAACTTGCATGAAT	NA	False	NA	-6	True	ATTAAA	-17	NA	28415020	28407446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_28408435_28412284_28412382_28414121
ENSMUST00000118885.8	chr16	+	1392	6	FSM	ENSMUSG00000004070.16	ENSMUST00000118885.8	1392	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	156.624391459313	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCTCTGCCTAACAGC	NA	False	NA	10	True	AATAAA	-11	NA	4574766	4584109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_4575035_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
ENSMUST00000118898.8	chr10	-	2168	10	FSM	ENSMUSG00000020069.17	ENSMUST00000118898.8	2168	10	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_6	104.074166337115	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGTCCTAGAATAT	5781	False	NA	-15	True	AATAAA	-15	NA	62859673	62850442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859498
ENSMUST00000118902.8	chr4	-	1887	10	FSM	ENSMUSG00000032897.18	ENSMUST00000118902.8	1887	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	134.081235740792	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	-1	True	AATAAA	-20	NA	120688769	120614634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120688637
ENSMUST00000118909.2	chr7	+	972	1	FSM	ENSMUSG00000100153.3	ENSMUST00000118909.2	972	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	452	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCACTTGACACTGCCTG	NA	False	NA	NA	False	AAGAAA	-4	NA	119339350	119340322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_119339400_119340300
ENSMUST00000118923.8	chr16	+	4838	47	FSM	ENSMUSG00000033653.19	ENSMUST00000118923.8	4838	47	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	45.7604358132908	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTCTTGGTTGTCA	NA	False	NA	21	True	AATAAA	-27	NA	21241918	21463430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_21241976_21253489_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21270105_21270112_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ENSMUST00000118924.2	chrX	+	621	1	FSM	ENSMUSG00000082035.2	ENSMUST00000118924.2	621	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-30	NA	95528464	95529085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_95528500_95529100
ENSMUST00000118927.8	chr7	+	2410	17	FSM	ENSMUSG00000030471.18	ENSMUST00000118927.8	2410	17	0	0	0	0	multi-exon	TRUE	canonical	3	240	junction_5	25.4348893009189	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAGTTTCTAATGCTTC	NA	False	NA	9	True	AATAAA	-20	NA	48438750	48477188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ENSMUST00000118998.2	chr5	+	402	1	FSM	ENSMUSG00000080893.2	ENSMUST00000118998.2	402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1955	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCAGTGAAGACTGTTCCT	3491	False	NA	NA	False	NA	NA	NA	130217235	130217637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_130217200_130217600
ENSMUST00000119002.2	chr3	-	568	4	FSM	ENSMUSG00000028062.16	ENSMUST00000119002.2	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	1254.14043161929	2405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTCTCACCTGCTTT	1142	False	NA	-7	True	AATAAA	-13	NA	88460166	88457126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460036
ENSMUST00000119003.2	chr8	+	2920	4	FSM	ENSMUSG00000066880.16	ENSMUST00000119003.2	2920	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	7.78888096369861	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGTGTTCTATTGCTGT	NA	False	NA	29	True	AATAAA	-17	NA	72676695	72688473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_72676817_72682045_72682173_72682981_72683043_72685862
ENSMUST00000119023.8	chr16	+	1048	9	FSM	ENSMUSG00000039200.17	ENSMUST00000119023.8	1048	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	24.2474225434375	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAATTACAGACTTGTT	NA	False	NA	NA	False	AGTAAA	-25	NA	10010769	10055152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029
ENSMUST00000119031.8	chr2	+	2477	11	FSM	ENSMUSG00000027259.16	ENSMUST00000119031.8	2477	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	26.5369553641709	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTTGAATTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	120970978	120987159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_120971091_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ENSMUST00000119041.8	chr7	-	2979	7	FSM	ENSMUSG00000030452.17	ENSMUST00000119041.8	2979	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	81.5127801840505	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGTTTCCCAGCCC	NA	False	NA	-20	True	AATAAA	-16	NA	55611993	55581034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611934
ENSMUST00000119047.8	chr5	+	726	5	FSM	ENSMUSG00000067365.12	ENSMUST00000119047.8	726	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	95.0167748347627	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTTTTTATACTATTTA	NA	False	NA	11	True	NA	NA	NA	38417727	38425251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38425041
ENSMUST00000119130.2	chr3	+	593	3	FSM	ENSMUSG00000068523.13	ENSMUST00000119130.2	593	3	0	0	0	0	multi-exon	FALSE	canonical	2	51	junction_1	1761	2020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTCCTTACTGATGT	NA	False	NA	2	True	AATAAA	-15	NA	146205863	146211303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_146206102_146209014_146209155_146211088
ENSMUST00000119149.8	chr2	-	1458	4	FSM	ENSMUSG00000078880.11	ENSMUST00000119149.8	1458	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	105.749179140497	578	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATCAGTGTAAGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	176328136	176315986	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_176317159_176317363_176317491_176324514_176324570_176328032
ENSMUST00000119154.8	chr5	-	4738	8	FSM	ENSMUSG00000054814.15	ENSMUST00000119154.8	4738	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	96.5769229206249	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCCTAGAGAACCACATC	NA	False	NA	NA	False	AATAAA	-11	NA	74229081	74159113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74228910
ENSMUST00000119158.8	chr3	+	1090	8	FSM	ENSMUSG00000027940.19	ENSMUST00000119158.8	1090	8	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_4	1700.12620179821	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTTGTAACTGCTTCATC	NA	False	NA	NA	False	AATAAA	-17	NA	89987021	90006090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89996354_89996431_89997103_89997167_89997316_89997387_90005681
ENSMUST00000119190.2	chrX	+	1585	2	FSM	ENSMUSG00000047797.15	ENSMUST00000119190.2	1585	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTTTTGAGTGTTGAA	NA	False	NA	NA	False	ATTAAA	-22	NA	100427341	100429235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_100427449_100427757
ENSMUST00000119212.8	chr5	+	3022	13	FSM	ENSMUSG00000033540.19	ENSMUST00000119212.8	3022	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.1113745189195	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTACCTGGCCTCCCAAG	NA	False	NA	12	True	NA	NA	NA	108817176	108832418	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108817384_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ENSMUST00000119223.2	chr7	-	3499	13	FSM	ENSMUSG00000046179.18	ENSMUST00000119223.2	3499	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_12	21.1073644336126	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATTTTCATTTGGCC	NA	False	NA	-1	True	ATTAAA	-17	NA	48531344	48516176	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48531155
ENSMUST00000119261.8	chr8	+	4645	29	FSM	ENSMUSG00000036270.17	ENSMUST00000119261.8	4645	29	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_18	83.7903344847198	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3326	False	NA	14	True	AATAAA	-6	NA	106607582	106619840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ENSMUST00000119273.2	chr16	-	778	4	FSM	ENSMUSG00000022706.17	ENSMUST00000119273.2	778	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	827.835061403471	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAGTATCTGTCTTTTG	NA	False	NA	-24	True	AATAAA	-7	NA	18695289	18690975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_18691413_18692286_18692446_18694073_18694187_18695220
ENSMUST00000119274.3	chr17	-	3354	14	FSM	ENSMUSG00000024006.18	ENSMUST00000119274.3	3354	14	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_13	173.563487011723	1561	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGGATTTCTTTTAT	NA	False	NA	2	True	AATAAA	-21	NA	29226969	29189853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219119_29226684
ENSMUST00000119278.8	chr7	-	2394	9	FSM	ENSMUSG00000038187.15	ENSMUST00000119278.8	2394	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	50.6814500088543	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGACCAACTTTATGA	NA	False	NA	-16	True	AATAAA	-17	NA	112968599	112914849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112968078_112968166_112968405
ENSMUST00000119299.8	chrX	+	3840	23	FSM	ENSMUSG00000034160.14	ENSMUST00000119299.8	3840	23	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	138.801667470395	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTTAAGACTTTTCAGC	NA	False	NA	NA	False	NA	NA	NA	100683665	100726546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ENSMUST00000119353.9	chr8	+	1720	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119353.9	1720	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	528.343741682439	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980373	70987978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ENSMUST00000119379.2	chr6	+	455	4	FSM	ENSMUSG00000002416.14	ENSMUST00000119379.2	455	4	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_3	851.269770532363	5602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATGTTTCTGATGACAA	NA	False	NA	30	True	ATTAAA	-39	NA	39569516	39576405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_39569647_39573384_39573530_39575199_39575300_39576325
ENSMUST00000119438.2	chr2	-	645	1	FSM	ENSMUSG00000080859.2	ENSMUST00000119438.2	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7919	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTCAATAGTTCTCTCC	NA	False	NA	NA	False	NA	NA	NA	105385190	105384545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_105384500_105385200
ENSMUST00000119464.2	chr16	+	2878	8	FSM	ENSMUSG00000022900.15	ENSMUST00000119464.2	2878	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	133.242452020398	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAATTCCTGTGTTTGGC	NA	False	NA	6	True	ATTAAA	-18	NA	36514399	36547103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_36514577_36528611_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543001_36545878
ENSMUST00000119472.8	chr9	-	1190	6	FSM	ENSMUSG00000032470.18	ENSMUST00000119472.8	1190	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	193.993195756965	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTGGCGAAGCCCCAAG	NA	False	NA	28	True	ATTAAA	-15	NA	99307949	99270031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99307829
ENSMUST00000119477.2	chrX	+	1239	6	FSM	ENSMUSG00000031226.14	ENSMUST00000119477.2	1239	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	564.946723151838	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGCCAGAGTTCCTTTT	NA	False	NA	5	True	AATAAA	-20	NA	104123366	104160696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104159919
ENSMUST00000119486.9	chr17	+	1030	5	FSM	ENSMUSG00000046711.17	ENSMUST00000119486.9	1030	5	0	0	0	0	multi-exon	FALSE	canonical	3	1035	junction_1	1821.9597964829	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAACAGGAAGTAGGATG	NA	False	NA	NA	False	NA	NA	NA	27775587	27781999	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ENSMUST00000119504.8	chr16	+	2562	17	FSM	ENSMUSG00000025616.15	ENSMUST00000119504.8	2562	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	72.8774388528439	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTTCACCTAAGTAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	87251866	87280198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266565_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279994
ENSMUST00000119523.8	chr5	-	2801	11	FSM	ENSMUSG00000039753.17	ENSMUST00000119523.8	2801	11	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_10	164.448046507096	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTGTGTTGTGATTTT	8835	False	NA	0	True	AATAAA	-29	NA	43939485	43901956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43930951_43939306
ENSMUST00000119559.8	chr1	-	1385	10	FSM	ENSMUSG00000026000.17	ENSMUST00000119559.8	1385	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	165.875529714376	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGAGTTTTTATTTCC	NA	False	NA	-5	True	AATGAA	-16	NA	67077993	67042533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077930
ENSMUST00000119579.3	chr5	+	636	2	FSM	ENSMUSG00000015804.15	ENSMUST00000119579.3	636	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTGTTGTTGTTTGTA	7398	False	NA	22	True	AGTAAA	-11	NA	45677636	45682940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_45677827_45682494
ENSMUST00000119603.2	chr19	+	1664	11	FSM	ENSMUSG00000024776.19	ENSMUST00000119603.2	1664	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.4158819570897	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCGGTTGTCACATTT	1741	False	NA	NA	False	AATAAA	-19	NA	34195023	34217731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_34195069_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ENSMUST00000119604.8	chr5	+	1208	4	FSM	ENSMUSG00000034211.15	ENSMUST00000119604.8	1208	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	359.259732722101	1825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGGCCTGTTTTGTTGT	773	False	NA	NA	False	NA	NA	NA	129792579	129795755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129792614_129792747_129793006_129793790_129793931_129794979
ENSMUST00000119633.8	chr19	+	2267	8	FSM	ENSMUSG00000024993.16	ENSMUST00000119633.8	2267	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	141.985771060601	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60800028	60824665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_60800112_60803029_60803247_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ENSMUST00000119640.8	chrX	-	2075	5	FSM	ENSMUSG00000035062.14	ENSMUST00000119640.8	2075	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.0312195418814	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTAACTGAGTGCATT	1007	False	NA	NA	False	AATAAA	-18	NA	94701989	94682801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_94684258_94685769_94685933_94686913_94687066_94688912_94689085_94701857
ENSMUST00000119673.2	chrX	+	279	1	FSM	ENSMUSG00000082974.2	ENSMUST00000119673.2	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2016	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCCTATTGATATCTGA	NA	False	NA	NA	False	NA	NA	NA	149214498	149214777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_149214500_149214800
ENSMUST00000119683.2	chr7	-	411	1	FSM	ENSMUSG00000083121.4	ENSMUST00000119683.2	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	640	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATTTTTGTTTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	100804262	100803851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_100803900_100804300
ENSMUST00000119685.8	chr5	+	3604	9	FSM	ENSMUSG00000041264.17	ENSMUST00000119685.8	3604	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	126.885713833355	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTTGGTTTCATTT	NA	False	NA	12	True	ATTAAA	-12	NA	149121476	149152240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_149121617_149124517_149124645_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUST00000119694.3	chr19	+	1980	14	FSM	ENSMUSG00000083282.4	ENSMUST00000119694.3	1980	14	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	8.77530154238379	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTAAGTGCTTAGTC	NA	False	NA	10	True	AATAAA	-21	NA	4905157	4910946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4905515_4905725_4905825_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ENSMUST00000119698.8	chr8	+	1799	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_1	286.852068800279	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980495	70987977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ENSMUST00000119718.8	chr4	+	2498	5	FSM	ENSMUSG00000078502.11	ENSMUST00000119718.8	2498	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.5111083689809	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTTGCTTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	145311772	145351911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_145311905_145343687_145343746_145347127_145347255_145348721_145349454_145350462
ENSMUST00000119736.8	chr8	+	1837	15	FSM	ENSMUSG00000031901.13	ENSMUST00000119736.8	1837	15	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_4	52.5452186216786	555	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCTGACATAATTTTTC	NA	False	NA	33	True	AATAAA	-33	NA	106738138	106780472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106738211_106742455_106742598_106752537_106752584_106756983_106757076_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
ENSMUST00000119754.8	chr7	-	2001	11	FSM	ENSMUSG00000030741.16	ENSMUST00000119754.8	2001	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	133.470446166932	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976583	125969238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_125969586_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ENSMUST00000119780.2	chr6	+	471	1	FSM	ENSMUSG00000055093.11	ENSMUST00000119780.2	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2667	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGTATGCGTTAATAAAA	NA	False	NA	-44	True	NA	NA	NA	122433862	122434333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_122433900_122434300
ENSMUST00000119797.8	chr5	+	2690	9	FSM	ENSMUSG00000025340.15	ENSMUST00000119797.8	2690	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	33.6962535009458	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTTGTTTTGTTTCTG	NA	False	NA	21	True	AATAAA	-43	NA	130200638	130243183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_130200736_130216241_130216428_130219717_130219885_130226790_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
ENSMUST00000119814.3	chr10	-	682	3	FSM	ENSMUSG00000020069.17	ENSMUST00000119814.3	682	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	86.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGATGAGACTTGGTTTT	5828	False	NA	NA	False	AATAAA	-34	NA	62859626	62853585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62854005_62855171_62855307_62859498
ENSMUST00000119827.8	chr10	-	1253	9	FSM	ENSMUSG00000019942.14	ENSMUST00000119827.8	1253	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	961.092444825158	10229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTCTGTATATGTGCA	NA	False	NA	-28	True	TTTAAA	-1	NA	69188733	69174153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69187421_69187513_69188665
ENSMUST00000119829.8	chr17	+	1955	6	FSM	ENSMUSG00000024160.17	ENSMUST00000119829.8	1955	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	60.8966337329084	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGCCCAAGCTGCCTG	NA	False	NA	NA	False	ATTAAA	-10	NA	25105710	25111111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25106080_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25110111_25110333
ENSMUST00000119846.8	chr7	-	2017	11	FSM	ENSMUSG00000030741.16	ENSMUST00000119846.8	2017	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	140.477079981042	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976583	125969238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ENSMUST00000119891.7	chr1	+	1125	7	FSM	ENSMUSG00000033488.12	ENSMUST00000119891.7	1125	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	19.7624784770422	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	157286149	157316630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157316012
ENSMUST00000119928.8	chr17	+	1441	10	FSM	ENSMUSG00000024188.17	ENSMUST00000119928.8	1441	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	192.098997111797	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTCTAGAGTAGAGGCA	NA	False	NA	32	True	AATAAA	-41	NA	26471939	26500964	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499139_26500598
ENSMUST00000119945.8	chr17	+	1018	7	FSM	ENSMUSG00000034729.17	ENSMUST00000119945.8	1018	7	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_2	381.394116659162	2363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7141	False	NA	7	True	NA	NA	NA	47679815	47689606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_47679880_47683351_47683417_47683497_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ENSMUST00000119953.2	chr16	-	1945	9	FSM	ENSMUSG00000005846.13	ENSMUST00000119953.2	1945	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	907.175424049836	7415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	954	False	NA	-3	True	ATTAAA	-25	NA	11021195	11010833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUST00000119968.8	chr3	+	1339	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	2880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACAGAAGTCTTAAAAG	NA	False	NA	16	True	AATAAA	-18	NA	87826812	87830969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUST00000119975.3	chr4	-	1879	12	FSM	ENSMUSG00000029022.19	ENSMUST00000119975.3	1879	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	115.583464172357	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952940	147945247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147945471_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147951787_147952060_147952525_147952641_147952825
ENSMUST00000119989.3	chr7	+	2087	2	FSM	ENSMUSG00000054715.12	ENSMUST00000119989.3	2087	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTCTGTTGTCTTATG	NA	False	NA	NA	False	NA	NA	NA	12631793	12642170	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_12631871_12640160
ENSMUST00000120004.8	chr7	+	4612	6	FSM	ENSMUSG00000057093.15	ENSMUST00000120004.8	4612	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	18.2362276800878	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27388764	27405909	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27388912_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ENSMUST00000120016.3	chr17	+	2796	2	FSM	ENSMUSG00000079605.6	ENSMUST00000120016.3	2796	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGACTGGCTTGAGTGA	NA	False	NA	16	True	AATAAA	-24	NA	27192140	27195177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_27192289_27192529
ENSMUST00000120041.8	chr14	-	2164	6	FSM	ENSMUSG00000002320.16	ENSMUST00000120041.8	2164	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	125.802384715076	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCGTTGGAAGTTTTG	5295	False	NA	51	True	AATAAA	-19	NA	55880708	55873421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880636
ENSMUST00000120094.5	chr5	-	680	7	FSM	ENSMUSG00000047215.15	ENSMUST00000120094.5	680	7	0	0	0	0	multi-exon	FALSE	canonical	3	5084	junction_6	3284.20622914511	30781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCAGAAGATTTTACATG	NA	False	NA	-120	True	ATTAAA	-32	NA	65548723	65545820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ENSMUST00000120105.8	chr2	-	1565	7	FSM	ENSMUSG00000009555.17	ENSMUST00000120105.8	1565	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	438.056947084382	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAATGGCTGCGTTTCCT	NA	False	NA	NA	False	ATTAAA	-19	NA	32602279	32597455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602221
ENSMUST00000120149.2	chr1	-	891	1	FSM	ENSMUSG00000084106.5	ENSMUST00000120149.2	891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTTAACCTAATTAAACA	NA	False	NA	NA	False	NA	NA	NA	86837405	86836514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_86836500_86837400
ENSMUST00000120194.2	chr11	-	2619	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	0	0	0	0	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTAATTGGTTGGTT	NA	False	NA	-8	True	ATTAAA	-24	NA	113574981	113552144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_113554370_113568129_113568230_113574687
ENSMUST00000120201.8	chrX	-	1859	7	FSM	ENSMUSG00000031310.17	ENSMUST00000120201.8	1859	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	20.0637871688163	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCAGCCTCTCCTTCCC	NA	False	NA	-1	True	NA	NA	NA	100463415	100458535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
ENSMUST00000120213.9	chr8	-	2200	11	FSM	ENSMUSG00000031667.17	ENSMUST00000120213.9	2200	11	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_9	146.200581394193	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTTTTTTAACTTCCAG	NA	False	NA	-3	True	AATAAA	-17	NA	91860625	91850126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858550_91858632_91860527
ENSMUST00000120240.8	chr6	+	1195	9	FSM	ENSMUSG00000029993.17	ENSMUST00000120240.8	1195	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1184.03386248029	6739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCTTCCTCTCACGAA	NA	False	NA	25	True	AATAAA	-31	NA	86986217	87005443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_86986372_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997825_87000109_87000171_87002467_87002643_87005276
ENSMUST00000120272.8	chr3	+	3323	12	FSM	ENSMUSG00000028175.16	ENSMUST00000120272.8	3323	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	13.4778667659976	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTATTTTTTTCAATC	NA	False	NA	NA	False	AATAAA	-20	NA	159201069	159235592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ENSMUST00000120276.9	chr17	-	4486	13	FSM	ENSMUSG00000024002.19	ENSMUST00000120276.9	4486	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	93.8707740578622	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCATGGAACCCTTTCTA	NA	False	NA	-11	True	AATAAA	-23	NA	32503083	32423883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_32425968_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503036
ENSMUST00000120281.8	chr10	-	1793	9	FSM	ENSMUSG00000000901.18	ENSMUST00000120281.8	1793	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	51.1639521538358	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	5083	False	NA	-3	True	ATTAAA	-17	NA	75768309	75759055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_75759325_75759792_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ENSMUST00000120314.8	chrX	-	1611	9	FSM	ENSMUSG00000067561.13	ENSMUST00000120314.8	1611	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	64.8072864344743	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTGCCCAGGTCTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	101898222	101891244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101897739_101897930_101898030
ENSMUST00000120327.3	chr5	+	1811	11	FSM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	36.4367945900843	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAGTGAAGGGTTTCA	NA	False	NA	21	True	NA	NA	NA	108777874	108794537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ENSMUST00000120338.2	chr7	-	456	1	FSM	ENSMUSG00000081431.2	ENSMUST00000120338.2	456	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12696	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTGTTGTGTGCACAAGC	NA	False	NA	NA	False	NA	NA	NA	133340663	133340207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_133340200_133340700
ENSMUST00000120344.8	chr10	+	1655	9	FSM	ENSMUSG00000001786.15	ENSMUST00000120344.8	1655	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	78.2747564672034	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGACTTGACTTTTTT	NA	False	NA	10	True	AGTAAA	-13	NA	85858052	85884187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_85858195_85860431_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ENSMUST00000120356.8	chrX	+	1520	6	FSM	ENSMUSG00000001127.13	ENSMUST00000120356.8	1520	6	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	64.9935381403413	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTTTCTCCAACTATCT	6308	False	NA	NA	False	AATAAA	-12	NA	20714816	20719128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168
ENSMUST00000120363.2	chr6	-	2043	3	FSM	ENSMUSG00000029844.10	ENSMUST00000120363.2	2043	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGCCTAAGCATCTT	NA	False	NA	-11	True	AATAAA	-14	NA	52135297	52132574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_52134070_52134546_52134642_52134844
ENSMUST00000120364.2	chr5	+	575	3	FSM	ENSMUSG00000106943.3	ENSMUST00000120364.2	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	23.5	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTTCACTTGTTCTT	NA	False	NA	19	True	AATAAA	-21	NA	74253737	74254998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_74253801_74254018_74254081_74254548
ENSMUST00000120377.8	chr3	-	2021	10	FSM	ENSMUSG00000028063.16	ENSMUST00000120377.8	2021	10	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	22.6377811589932	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGCCCTGGCCTTTCT	NA	False	NA	-1	True	ATTAAA	-19	NA	88410614	88390511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ENSMUST00000120389.8	chrX	-	2415	4	FSM	ENSMUSG00000046032.17	ENSMUST00000120389.8	2415	4	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_3	23.8094285712381	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTTTTTCTCCTTAA	NA	False	NA	-15	True	ATTAAA	-15	NA	100266155	100255564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_100257471_100258006_100258132_100259088_100259185_100265867
ENSMUST00000120397.8	chr3	+	1172	10	FSM	ENSMUSG00000028167.16	ENSMUST00000120397.8	1172	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	10.4880884817015	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTAGTTTTTTTTCTTAA	NA	False	NA	21	True	AATAAA	-31	NA	134986981	135010187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_134987130_134991275_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
ENSMUST00000120450.2	chr16	-	1865	11	FSM	ENSMUSG00000022962.16	ENSMUST00000120450.2	1865	11	0	0	0	0	multi-exon	FALSE	canonical	3	1247	junction_10	242.657701299588	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGATTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-22	NA	91443823	91430292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ENSMUST00000120488.3	chr16	+	2596	7	FSM	ENSMUSG00000022750.19	ENSMUST00000120488.3	2596	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	179.822520527572	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTACAGTCTGAGTTT	NA	False	NA	19	True	AATAAA	-28	NA	17580654	17611246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_17580719_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ENSMUST00000120489.2	chr3	+	231	1	FSM	ENSMUSG00000083045.2	ENSMUST00000120489.2	231	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCGCATCTCTCCCTGCCA	NA	False	NA	NA	False	NA	NA	NA	135201413	135201644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135201400_135201600
ENSMUST00000120580.8	chr12	+	4069	14	FSM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	84.525476709793	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCTGTGGTCTCCTTC	7507	False	NA	8	True	AATAAA	-16	NA	65083106	65110160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ENSMUST00000120595.8	chr7	+	2255	19	FSM	ENSMUSG00000040811.16	ENSMUST00000120595.8	2255	19	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	24.7224719088515	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAGTCTGGTCTATT	NA	False	NA	25	True	AATACA	-17	NA	18915094	18940407	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_18915149_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ENSMUST00000120690.2	chr9	-	3627	6	FSM	ENSMUSG00000032328.13	ENSMUST00000120690.2	3627	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	180.204994381399	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTGCTGTTTATGTGTC	NA	False	NA	-9	True	AATAAA	-14	NA	79700789	79676224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79700255
ENSMUST00000120697.8	chr3	+	1475	9	FSM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	249.13701049824	2252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	False	NA	18	True	ATTAAA	-22	NA	89084796	89090072	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ENSMUST00000120762.2	chrX	-	750	1	FSM	ENSMUSG00000082926.4	ENSMUST00000120762.2	750	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42608	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTTTAAGAGCAACAAATA	NA	False	NA	NA	False	NA	NA	NA	68649851	68649101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_68649100_68649900
ENSMUST00000120794.8	chr4	+	1884	17	FSM	ENSMUSG00000029034.10	ENSMUST00000120794.8	1884	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	240.176465073079	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTATCCACCAGGAATCC	9960	False	NA	NA	False	NA	NA	NA	155954002	155973142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969620_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ENSMUST00000120805.8	chr3	-	551	5	FSM	ENSMUSG00000027679.14	ENSMUST00000120805.8	551	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	1441.31155549381	2827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAAGGATTTCAAGAATT	NA	False	NA	26	True	NA	NA	NA	34135459	34131472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34135334
ENSMUST00000120867.8	chr5	-	1234	7	FSM	ENSMUSG00000015806.13	ENSMUST00000120867.8	1234	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	385.068680742655	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	-19	True	AATAAA	-15	NA	45607307	45591394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607223
ENSMUST00000120870.2	chr4	+	1575	3	FSM	ENSMUSG00000082082.2	ENSMUST00000120870.2	1575	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0.5	662	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTCAAATATATTGAAGG	NA	False	NA	NA	False	AAGAAA	-1	NA	145173309	145177458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_145173342_145174456_145174578_145176036
ENSMUST00000120876.2	chr7	-	1633	6	FSM	ENSMUSG00000048330.15	ENSMUST00000120876.2	1633	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	14.7837748900611	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTTATTCTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	108682529	108637154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_108638091_108647157_108647301_108653571_108653666_108655950_108656024_108656989_108657217_108682369
ENSMUST00000120879.8	chr7	+	2141	7	FSM	ENSMUSG00000030990.19	ENSMUST00000120879.8	2141	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	65.7809918509054	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTAGGTATGTTGCTCC	NA	False	NA	16	True	AATAAA	-23	NA	101859568	101887774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_101859799_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ENSMUST00000120902.8	chr5	+	5195	41	FSM	ENSMUSG00000037426.19	ENSMUST00000120902.8	5195	41	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_31	27.765085989422	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCCCTCC	2879	False	NA	7	True	AATAAA	-8	NA	33021930	33149005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ENSMUST00000120912.8	chr5	+	2345	10	FSM	ENSMUSG00000029247.18	ENSMUST00000120912.8	2345	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	1026.8195172413	9207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGCTGTGTGGTCTATA	327	False	NA	19	True	ATTAAA	-22	NA	77099194	77115356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_77099516_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUST00000120928.2	chr11	+	1402	4	FSM	ENSMUSG00000048277.16	ENSMUST00000120928.2	1402	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	286.604256772296	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGCTGGGTGGCGC	NA	False	NA	14	True	AATAAA	-14	NA	117700521	117705109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_117700630_117703374_117703523_117703871_117704012_117704103
ENSMUST00000120934.8	chr18	-	1497	10	FSM	ENSMUSG00000024539.18	ENSMUST00000120934.8	1497	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	167.715440958197	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGGTTTGTGTGTGTG	NA	False	NA	-14	True	ATTAAA	-19	NA	67857643	67798580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_67798945_67805736_67805839_67808789_67808900_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ENSMUST00000120935.2	chr7	+	2156	4	FSM	ENSMUSG00000055102.16	ENSMUST00000120935.2	2156	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	36.4630711207319	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCTTATTTTAAATACAC	2836	False	NA	7	True	AATAAA	-15	NA	43256592	43267640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43256699_43261406_43261534_43261970_43262064_43265810
ENSMUST00000120940.8	chr11	-	1192	4	FSM	ENSMUSG00000009894.16	ENSMUST00000120940.8	1192	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	131.864408474092	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGAGGAGCCGGGTCT	NA	False	NA	-7	True	NA	NA	NA	59340833	59297969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_59298060_59319166_59319640_59328803_59329340_59340740
ENSMUST00000120959.8	chr2	-	1458	4	FSM	ENSMUSG00000078881.11	ENSMUST00000120959.8	1458	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	108.739239569818	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATCAGTGTAAGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	176178566	176166422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_176167595_176167799_176167927_176174950_176175006_176178462
ENSMUST00000120963.8	chr5	-	3694	16	FSM	ENSMUSG00000055923.17	ENSMUST00000120963.8	3694	16	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_15	18.6828501275605	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTGGTCCTTTCCA	NA	False	NA	2	True	ATTAAA	-21	NA	77053361	77023781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
ENSMUST00000120967.8	chr17	+	2609	7	FSM	ENSMUSG00000023902.19	ENSMUST00000120967.8	2609	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_6	80.8484521943508	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGATTTTTTTACTTTT	879	False	NA	35	True	AGTAAA	-19	NA	23819829	23829993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240_23828441_23828536
ENSMUST00000120990.2	chr7	+	1685	3	FSM	ENSMUSG00000051041.9	ENSMUST00000120990.2	1685	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTGCCTTAAGTATCTT	NA	False	NA	NA	False	AATACA	-24	NA	107166652	107190301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_107167102_107170243_107170533_107189354
ENSMUST00000121001.2	chr5	-	555	1	FSM	ENSMUSG00000081855.5	ENSMUST00000121001.2	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2603	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATAAAATAAAGGC	NA	False	NA	NA	False	AAGAAA	-34	NA	22818180	22817625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_22817600_22818200
ENSMUST00000121004.3	chr7	+	1840	9	FSM	ENSMUSG00000030815.12	ENSMUST00000121004.3	1840	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	32.8954309137303	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCATGTCTGCTGTCTA	NA	False	NA	24	True	AATAAA	-25	NA	127172700	127182477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127173139_127176706_127176883_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ENSMUST00000121034.8	chr3	+	2035	8	FSM	ENSMUSG00000027900.16	ENSMUST00000121034.8	2035	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45.9937884004848	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTTGTCATGAAAATGA	NA	False	NA	NA	False	AATAAA	-14	NA	106455179	106482161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_106455237_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ENSMUST00000121048.2	chr3	+	1234	5	FSM	ENSMUSG00000019710.14	ENSMUST00000121048.2	1234	5	0	0	0	0	multi-exon	FALSE	canonical	3	982	junction_2	28.5744641244591	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTAAAAGCTTTATAAAT	NA	False	NA	26	True	AATAAA	-28	NA	87828915	87830979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUST00000121127.2	chr5	+	2570	7	FSM	ENSMUSG00000029385.15	ENSMUST00000121127.2	2570	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	9.62057979310787	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATTCCTATTTCAGT	NA	False	NA	NA	False	AATAAA	-21	NA	93416172	93424083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
ENSMUST00000121185.8	chr11	-	911	4	FSM	ENSMUSG00000020738.17	ENSMUST00000121185.8	911	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	1864.33300554261	12207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTCTTTATTCTGAA	NA	False	NA	-51	True	AATAAA	-18	NA	115426643	115413927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426604
ENSMUST00000121204.8	chr9	-	1290	11	FSM	ENSMUSG00000061559.16	ENSMUST00000121204.8	1290	11	0	0	0	0	multi-exon	FALSE	canonical	3	544	junction_10	185.351584832717	3343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACCTGCATTTGTGAAC	5421	False	NA	-8	True	AATAAA	-14	NA	54641803	54624447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
ENSMUST00000121210.8	chr4	+	548	4	FSM	ENSMUSG00000042198.13	ENSMUST00000121210.8	548	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	176.426251510999	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGAGCACTGGATCCAG	-5	True	NA	NA	False	CATAAA	-4	NA	3938913	3943050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_3938963_3939423_3939527_3941245_3941312_3942720
ENSMUST00000121228.2	chr11	-	704	3	FSM	ENSMUSG00000057534.14	ENSMUST00000121228.2	704	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	27	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCGCGTCATACT	6805	False	NA	0	True	AATAAA	-26	NA	88857757	88855483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_88856100_88857540_88857603_88857731
ENSMUST00000121230.2	chr2	+	796	1	FSM	ENSMUSG00000083745.2	ENSMUST00000121230.2	796	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAAGTCCATCCTGCTCA	NA	False	NA	NA	False	NA	NA	NA	37562219	37563015	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_37562200_37563000
ENSMUST00000121231.8	chr3	-	2121	9	FSM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	80.7074191137345	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTTTTTTCTCAATTTT	NA	False	NA	-5	True	AATAAA	-16	NA	106454898	106410298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505_106446913_106454738
ENSMUST00000121304.2	chr10	-	1622	9	FSM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	0	0	0	0	multi-exon	FALSE	canonical	3	799	junction_7	118.779206934547	4258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTCTGTGCAGTAGCA	6864	False	NA	-10	True	AATAAA	-12	NA	75757448	75732610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633_75752746_75757136
ENSMUST00000121315.2	chr17	+	2860	4	FSM	ENSMUSG00000044501.18	ENSMUST00000121315.2	2860	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	15.7973274814304	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTAGTCATTTATCTT	NA	False	NA	25	True	AATAAA	-25	NA	22580502	22596262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_22580689_22591016_22591070_22592623_22592751_22593768
ENSMUST00000121360.8	chr6	+	1188	6	FSM	ENSMUSG00000029911.15	ENSMUST00000121360.8	1188	6	0	0	0	0	multi-exon	FALSE	canonical	3	2472	junction_3	238.868666844356	5817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40448401	40457929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ENSMUST00000121393.9	chr2	-	4402	5	FSM	ENSMUSG00000078899.10	ENSMUST00000121393.9	4402	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	105.8828952192	2281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175179990	175163747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_175167842_175168998_175169060_175169264_175169392_175176415_175176471_175179925
ENSMUST00000121416.8	chr5	+	3792	8	FSM	ENSMUSG00000041264.17	ENSMUST00000121416.8	3792	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	82.9762690441658	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTTTGTTGGTTTCAT	NA	False	NA	10	True	ATTAAA	-10	NA	149121159	149152238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUST00000121442.2	chr4	-	491	3	FSM	ENSMUSG00000040795.13	ENSMUST00000121442.2	491	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	58	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGACTTGTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	129512889	129511891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_129512156_129512284_129512429_129512806
ENSMUST00000121456.2	chr2	+	952	1	FSM	ENSMUSG00000081434.4	ENSMUST00000121456.2	952	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1691	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCGCCAAAGCAACCAAGT	NA	False	NA	NA	False	NA	NA	NA	152195534	152196486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_152195500_152196500
ENSMUST00000121487.2	chr11	+	742	1	FSM	ENSMUSG00000085897.3	ENSMUST00000121487.2	742	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTTTAAGAGCAACAAATA	8600	False	NA	NA	False	NA	NA	NA	98076191	98076933	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_98076200_98076900
ENSMUST00000121491.8	chr4	+	2862	5	FSM	ENSMUSG00000073988.14	ENSMUST00000121491.8	2862	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	15.2212844398888	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGTTTATATTTTTC	17	False	NA	21	True	AATAAA	-17	NA	20008006	20030470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_20008347_20014630_20014785_20021191_20021386_20023784_20023896_20028407
ENSMUST00000121497.2	chr1	+	414	1	FSM	ENSMUSG00000058603.11	ENSMUST00000121497.2	414	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4659	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCACACGCCCGAAGCAA	NA	False	NA	NA	False	NA	NA	NA	127966305	127966719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_127966300_127966700
ENSMUST00000121520.8	chrX	-	5564	25	FSM	ENSMUSG00000031310.17	ENSMUST00000121520.8	5564	25	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_18	23.7530334320108	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTTCTCTGGGGGA	NA	False	NA	-2	True	AATAAA	-14	NA	100463520	100447989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463303
ENSMUST00000121532.8	chr7	-	915	6	FSM	ENSMUSG00000060538.15	ENSMUST00000121532.8	915	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	16.451139778143	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTGTAAGGTACTTAC	6242	False	NA	-2	True	AATAAA	-14	NA	126497425	126485391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126496397_126497395
ENSMUST00000121542.2	chr17	-	1521	8	FSM	ENSMUSG00000073436.12	ENSMUST00000121542.2	1521	8	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	4.68606270481621	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGGCATTTGTGAAGGC	1864	False	NA	NA	False	GATAAA	-16	NA	25114061	25111125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25111658_25111728_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113682_25113794
ENSMUST00000121545.2	chrX	-	483	1	FSM	ENSMUSG00000083596.5	ENSMUST00000121545.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1734	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTACACAAAGAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	149998645	149998162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_149998200_149998600
ENSMUST00000121559.2	chrX	+	586	1	FSM	ENSMUSG00000081933.2	ENSMUST00000121559.2	586	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	467	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCGGGTGCTGGAGACT	NA	False	NA	NA	False	NA	NA	NA	84760043	84760629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_84760000_84760600
ENSMUST00000121618.2	chr13	+	4209	2	FSM	ENSMUSG00000045312.13	ENSMUST00000121618.2	4209	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCAAGTTTGTTGGC	9031	False	NA	9	True	ATTAAA	-18	NA	94310499	94331917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_94311147_94328355
ENSMUST00000121623.8	chr8	-	884	7	FSM	ENSMUSG00000055553.17	ENSMUST00000121623.8	884	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	10409.9140993361	77186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGTAATTGGTGTCTAG	NA	False	NA	-13	True	AATAAA	-19	NA	70975813	70960921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70968044_70968092_70971014_70971168_70972586_70972712_70975712
ENSMUST00000121635.7	chr9	+	1525	5	FSM	ENSMUSG00000010067.14	ENSMUST00000121635.7	1525	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.743931323712	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTGGACTCTATAGA	NA	False	NA	9	True	AATAAA	-16	NA	107433809	107439462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107433951_107434651_107434757_107434968_107435267_107435385_107435502_107438597
ENSMUST00000121646.8	chr10	+	5260	6	FSM	ENSMUSG00000019817.19	ENSMUST00000121646.8	5260	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	38.4416440855487	378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3010	False	NA	18	True	AATAAA	-18	NA	12966531	13007438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_12966769_12981598_12981638_12988262_12988295_12992439_12992526_13000599_13000913_13002885
ENSMUST00000121651.8	chr4	+	620	5	FSM	ENSMUSG00000042198.13	ENSMUST00000121651.8	620	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	167.916645988419	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACATGTTTTGGGGTTT	-5	True	NA	23	True	ATTAAA	-16	NA	3938913	3943521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_3939132_3939423_3939527_3941245_3941312_3942720_3942820_3943387
ENSMUST00000121658.2	chr2	-	1000	1	FSM	ENSMUSG00000083773.5	ENSMUST00000121658.2	1000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	749	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACCCTGGACCACCCA	NA	False	NA	NA	False	NA	NA	NA	28824621	28823621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_28823600_28824600
ENSMUST00000121661.8	chr5	-	1056	5	FSM	ENSMUSG00000037822.13	ENSMUST00000121661.8	1056	5	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_4	163.329421721869	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGGTTTAGAATCCATT	NA	False	NA	NA	False	AATAAA	-19	NA	65650403	65607145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650283
ENSMUST00000121671.2	chr17	-	561	3	FSM	ENSMUSG00000023973.14	ENSMUST00000121671.2	561	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	258.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGACAGTGTGCTCATA	NA	False	NA	NA	False	NA	NA	NA	47063121	47057912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47058127_47058346_47058471_47062898
ENSMUST00000121703.3	chr16	-	609	5	FSM	ENSMUSG00000022604.19	ENSMUST00000121703.3	609	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	14.2653426176871	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGTATCGAGTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	55755196	55744918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_55745043_55745331_55745434_55748083_55748243_55750828_55750972_55755115
ENSMUST00000121791.8	chr14	-	2148	6	FSM	ENSMUSG00000002320.16	ENSMUST00000121791.8	2148	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	136.928594530142	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTTTTTACAATTAT	5192	False	NA	4	True	NA	NA	NA	55880811	55873468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880708
ENSMUST00000121821.2	chr5	-	636	1	FSM	ENSMUSG00000084111.5	ENSMUST00000121821.2	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48029	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGGAGAGTTGCA	NA	False	NA	NA	False	AAAAAG	-44	NA	92288788	92288152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92288200_92288800
ENSMUST00000121886.8	chr8	-	2259	5	FSM	ENSMUSG00000060427.16	ENSMUST00000121886.8	2259	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	33.7083075813663	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTATTACTTAGTACTC	NA	False	NA	-6	True	AATAAA	-23	NA	70078199	70063507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70078085
ENSMUST00000121888.8	chr18	-	2674	15	FSM	ENSMUSG00000044252.19	ENSMUST00000121888.8	2674	15	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	113.316357772281	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12995480	12888384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
ENSMUST00000121903.2	chr6	+	1304	6	FSM	ENSMUSG00000047115.16	ENSMUST00000121903.2	1304	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	14.4360659460949	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGGGTCAGATTTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	49344756	49366214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49365750
ENSMUST00000121920.8	chr3	+	1115	6	FSM	ENSMUSG00000019710.14	ENSMUST00000121920.8	1115	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	351.330841230883	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTAAAAGCTTTATAAAT	NA	False	NA	26	True	AATAAA	-28	NA	87826869	87830979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_87826959_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUST00000121925.8	chr16	+	2656	14	FSM	ENSMUSG00000035506.17	ENSMUST00000121925.8	2656	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	11.5650974613248	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTATTTTTTATTATT	NA	False	NA	9	True	AATAAA	-19	NA	33337697	33483778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
ENSMUST00000121937.8	chr14	-	2398	5	FSM	ENSMUSG00000002320.16	ENSMUST00000121937.8	2398	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.332956258944	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCTGTCGTTGGAAGTT	5231	False	NA	48	True	AATAAA	-16	NA	55880772	55873424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55874070_55875366_55875590_55877841_55878028_55878423_55879046_55880050
ENSMUST00000122026.6	chr5	+	1668	11	FSM	ENSMUSG00000029199.12	ENSMUST00000122026.6	1668	11	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_10	33.1264244976726	1502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCGTGTGTGTATGTGT	6886	False	NA	48	True	AAAAAG	-11	NA	65548839	65566550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ENSMUST00000122038.8	chr1	-	2850	14	FSM	ENSMUSG00000026019.16	ENSMUST00000122038.8	2850	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_13	257.719103084491	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTGTCTAGGCTGATA	NA	False	NA	NA	False	AATAAA	-23	NA	60137305	60116026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137203
ENSMUST00000122062.2	chr11	+	346	1	FSM	ENSMUSG00000081766.4	ENSMUST00000122062.2	346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8630	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGAGGGCCCCACAGCC	NA	False	NA	NA	False	NA	NA	NA	88863482	88863828	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_88863500_88863800
ENSMUST00000122063.8	chr14	+	3088	26	FSM	ENSMUSG00000040040.17	ENSMUST00000122063.8	3088	26	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_12	10.0195009855781	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGAGGCTAATGACTTC	NA	False	NA	13	True	AATAAA	-15	NA	57661518	57755393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754437_57754549_57754793
ENSMUST00000122095.3	chr5	-	826	1	FSM	ENSMUSG00000082760.3	ENSMUST00000122095.3	826	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGCTCAACTCTGAC	8444	False	NA	NA	False	NA	NA	NA	121610451	121609625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_121609600_121610500
ENSMUST00000122110.8	chr6	-	3076	20	FSM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_16	54.5472424788812	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTACGGGGGCTGAC	7905	False	NA	-27	True	AATACA	-9	NA	124806398	124792000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ENSMUST00000122113.8	chr5	+	2606	15	FSM	ENSMUSG00000005514.15	ENSMUST00000122113.8	2606	15	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_9	18.0894884349098	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTGTTGATTGAG	2023	False	NA	14	True	AATAAA	-14	NA	135718011	135764180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763561_135763666
ENSMUST00000122128.2	chr3	+	1608	15	FSM	ENSMUSG00000027998.12	ENSMUST00000122128.2	1608	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	195.015331684042	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCATGGCTGTCCTGTTC	NA	False	NA	-93	True	NA	NA	NA	82962861	82979479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966661_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
ENSMUST00000122133.2	chr2	+	279	1	FSM	ENSMUSG00000081751.2	ENSMUST00000122133.2	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGCTGTCTGAGACT	NA	False	NA	NA	False	NA	NA	NA	156164321	156164600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_156164300_156164600
ENSMUST00000122154.3	chrX	-	337	3	FSM	ENSMUSG00000081443.3	ENSMUST00000122154.3	337	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	7	492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTCTTTGACTGTGTG	3627	False	NA	NA	False	AATAAA	-16	NA	101730578	101729897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_101730044_101730198_101730354_101730542
ENSMUST00000122160.8	chr5	+	3827	10	FSM	ENSMUSG00000041264.17	ENSMUST00000122160.8	3827	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	142.108287696738	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTTGGTTTCATTT	NA	False	NA	12	True	ATTAAA	-12	NA	149121472	149152240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_149121617_149122294_149122472_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUST00000122188.10	chr8	+	2371	13	FSM	ENSMUSG00000047866.21	ENSMUST00000122188.10	2371	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	73.1522385166715	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATTCTGGTCTCCAGTG	NA	False	NA	NA	False	AATAAA	-12	NA	87350733	87443259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_87351045_87358013_87358249_87360496_87360560_87364600_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ENSMUST00000122202.8	chr7	-	1336	7	FSM	ENSMUSG00000061479.16	ENSMUST00000122202.8	1336	7	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_6	627.600567417065	3210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-26	NA	26895670	26886431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895418
ENSMUST00000122204.3	chr5	+	774	1	FSM	ENSMUSG00000033036.10	ENSMUST00000122204.3	774	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1961	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAACAACAAAAAA	NA	False	NA	NA	False	AATAAA	-36	NA	44070485	44071259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_44070500_44071300
ENSMUST00000122254.8	chr16	-	845	7	FSM	ENSMUSG00000058240.15	ENSMUST00000122254.8	845	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	729.425668286739	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGGGGACATTCCAAAA	9180	False	NA	-24	True	NA	NA	NA	91525511	91486493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91486804_91496064_91496177_91497959_91498094_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUST00000122259.8	chr10	-	4102	15	FSM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_14	78.4471744785844	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983423	60934420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
ENSMUST00000122274.2	chrX	+	697	1	FSM	ENSMUSG00000082002.2	ENSMUST00000122274.2	697	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAATCTTTTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	156323861	156324558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_156323900_156324600
ENSMUST00000122279.2	chr18	+	667	4	FSM	ENSMUSG00000024608.12	ENSMUST00000122279.2	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	24831	junction_3	1445.1337500576	30870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGTTCTGGTGTTGTG	NA	False	NA	67	True	AATAAA	-17	NA	60909310	60911617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUST00000122309.2	chr4	-	2405	4	FSM	ENSMUSG00000078495.11	ENSMUST00000122309.2	2405	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	106.377733676847	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGTATCTGGCAAACT	8373	False	NA	NA	False	NA	NA	NA	147860290	147838655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147840693_147842158_147842286_147845677_147845783_147860154
ENSMUST00000122313.2	chr11	-	162	1	FSM	ENSMUSG00000081958.2	ENSMUST00000122313.2	162	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACCTTCAGGGACAACCT	NA	False	NA	NA	False	NA	NA	NA	97213315	97213153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97213200_97213300
ENSMUST00000122327.7	chr7	-	3521	13	FSM	ENSMUSG00000044465.20	ENSMUST00000122327.7	3521	13	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_12	109.388038905337	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049239	105027818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
ENSMUST00000122352.2	chr11	+	1003	1	FSM	ENSMUSG00000082816.2	ENSMUST00000122352.2	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCCTGGCCACCCACCC	6390	False	NA	NA	False	NA	NA	NA	3901713	3902716	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_3901700_3902700
ENSMUST00000122358.8	chr14	-	2517	6	FSM	ENSMUSG00000002320.16	ENSMUST00000122358.8	2517	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	133.851260733696	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCGTTGGAAGTTTTG	4740	False	NA	51	True	AATAAA	-19	NA	55881263	55873421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880838
ENSMUST00000122384.9	chr9	-	1167	6	FSM	ENSMUSG00000032470.18	ENSMUST00000122384.9	1167	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	190.404411713594	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGCTGTTGTCTTCTTAA	3694	False	NA	21	True	GATAAA	-10	NA	99318979	99269980	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318933
ENSMUST00000122412.2	chr18	-	2667	9	FSM	ENSMUSG00000024539.18	ENSMUST00000122412.2	2667	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	140.12890271104	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTGTCCCTTACCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	67857665	67804281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ENSMUST00000122819.8	chr8	-	1053	6	FSM	ENSMUSG00000000739.15	ENSMUST00000122819.8	1053	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	38.0189426470542	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGACTCTGTCCCAGG	9743	False	NA	-7	True	AATAAA	-16	NA	123885009	123869587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_123869886_123872080_123872262_123875048_123875176_123875957_123876173_123884177_123884327_123884926
ENSMUST00000122893.2	chr5	-	631	4	FSM	ENSMUSG00000034826.15	ENSMUST00000122893.2	631	4	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_1	53.8908361618395	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTTGTTTTTTTAGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	92582950	92575879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92576186_92578659_92578813_92578897_92578982_92582862
ENSMUST00000122899.8	chr17	+	2743	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	29.4089933334837	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	9327	False	NA	15	True	AATAAA	-22	NA	36176947	36186488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
ENSMUST00000122900.2	chr2	+	2589	3	FSM	ENSMUSG00000027176.9	ENSMUST00000122900.2	2589	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	20.5	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCGGTATTTCATGGTGT	6909	False	NA	NA	False	AATAAA	-22	NA	104420876	104441751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_104421048_104439215_104439318_104439435
ENSMUST00000122915.8	chr7	+	1828	15	FSM	ENSMUSG00000015149.15	ENSMUST00000122915.8	1828	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	14.0365775815931	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGACTTGTGTGGCCTCT	NA	False	NA	12	True	ATTAAA	-21	NA	28466159	28488085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28466293_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341
ENSMUST00000122924.2	chr19	+	1082	3	FSM	ENSMUSG00000110949.2	ENSMUST00000122924.2	1082	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	4	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTCTGGCATCTTCCGT	3564	False	NA	7	True	ATTAAA	-16	NA	4050630	4052101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4051329_4051627_4051706_4051795
ENSMUST00000122941.8	chr15	+	4850	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	0	0	0	0	multi-exon	FALSE	canonical	1	184	junction_8	102.146464828737	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGTCTATATTATCTG	40	False	NA	NA	False	AATACA	-17	NA	12117916	12185769	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ENSMUST00000122955.8	chr6	-	1605	7	FSM	ENSMUSG00000068329.13	ENSMUST00000122955.8	1605	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	204.724543933767	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTACAGTCAAAAGTGGGG	1897	False	NA	-12	True	AATAAA	-17	NA	83031552	83028260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83030018_83030052_83030309_83030505_83030593_83030799_83030901
ENSMUST00000122965.8	chr2	-	3048	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCTTTCTCTTACCCTG	NA	False	NA	-4	True	AATAAA	-30	NA	105734909	105531371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ENSMUST00000122996.8	chr6	-	1485	5	FSM	ENSMUSG00000029922.16	ENSMUST00000122996.8	1485	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_4	1508.75983841034	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTGAAATGTCTTCT	NA	False	NA	1	True	AATAAA	-22	NA	39397001	39377687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396773
ENSMUST00000123093.2	chr6	+	2976	6	FSM	ENSMUSG00000007458.15	ENSMUST00000123093.2	2976	6	0	0	0	0	multi-exon	FALSE	canonical	3	1209	junction_4	60.7466871524695	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGTTGCCTCAAGTT	2943	False	NA	11	True	ATTAAA	-18	NA	122285957	122293748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_122286126_122289192_122289373_122290217_122292126_122292262_122292394_122293008_122293136_122293286
ENSMUST00000123109.8	chr7	-	2237	7	FSM	ENSMUSG00000038930.12	ENSMUST00000123109.8	2237	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	12.8192563486863	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAATAATAAA	NA	False	NA	NA	False	NA	NA	NA	79973873	79966388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_79966799_79967200_79967231_79968606_79968775_79968993_79969090_79969839_79970930_79971024_79971092_79973497
ENSMUST00000123112.8	chr15	-	1896	7	FSM	ENSMUSG00000022552.17	ENSMUST00000123112.8	1896	7	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_5	16.0977914289162	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	8114	False	NA	-3	True	ATTAAA	-16	NA	76235310	76231239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76231386_76231458_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234254_76234430_76234680
ENSMUST00000123146.8	chr16	+	361	3	FSM	ENSMUSG00000071632.11	ENSMUST00000123146.8	361	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	39.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACTGGAAACTTAACT	NA	False	NA	NA	False	AGTAAA	-17	NA	18655330	18656137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18655370_18655455_18655624_18655983
ENSMUST00000123174.2	chrX	-	1838	6	FSM	ENSMUSG00000031229.17	ENSMUST00000123174.2	1838	6	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	21.4979068748564	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGATTGTTTTCCTTT	NA	False	NA	-6	True	AATAAA	-18	NA	104918870	104895042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165
ENSMUST00000123184.2	chr5	-	563	3	FSM	ENSMUSG00000050856.17	ENSMUST00000123184.2	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	3979	junction_1	613.5	5675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTCTCTCTTTACTGT	5553	False	NA	-2	True	AATAAA	-22	NA	108582263	108581111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_108581204_108581596_108581696_108581891
ENSMUST00000123227.3	chr5	+	1466	4	FSM	ENSMUSG00000040532.15	ENSMUST00000123227.3	1466	4	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	61.059169845505	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGATCCGTTTTCACC	NA	False	NA	10	True	AATAAA	-17	NA	135038544	135041024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135038694_135038835_135038972_135039740_135040235_135040337
ENSMUST00000123244.8	chr10	+	927	8	FSM	ENSMUSG00000020059.10	ENSMUST00000123244.8	927	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	38.7767024521326	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295525	88309098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88303144_88303245_88305407_88305507_88308537_88308643_88308766
ENSMUST00000123265.2	chr2	-	1572	2	FSM	ENSMUSG00000078861.9	ENSMUST00000123265.2	1572	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTCATACAGATAAAAAGA	NA	False	NA	0	True	NA	NA	NA	177720248	177710268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_177711743_177720150
ENSMUST00000123355.8	chr7	+	1298	3	FSM	ENSMUSG00000036854.15	ENSMUST00000123355.8	1298	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	8.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTGCCTTATGTCTGGG	NA	False	NA	8	True	AATAAA	-16	NA	30251948	30254864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30252153_30253686_30253810_30253893
ENSMUST00000123358.9	chr7	-	1853	9	FSM	ENSMUSG00000060601.14	ENSMUST00000123358.9	1853	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	201.405336014218	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGCCACAAGTGCCCCA	NA	False	NA	NA	False	NA	NA	NA	44203335	44199408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44202045_44202120_44202179_44203002_44203133_44203232
ENSMUST00000123362.8	chrX	-	1675	5	FSM	ENSMUSG00000031393.17	ENSMUST00000123362.8	1675	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	78.7222173214144	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTAGAGTTTCGTGG	NA	False	NA	NA	False	AATAAA	-21	NA	73129218	73078894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_73079937_73080045_73080101_73080587_73080939_73123514_73123639_73129115
ENSMUST00000123413.8	chr16	+	1965	12	FSM	ENSMUSG00000022884.17	ENSMUST00000123413.8	1965	12	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_11	605.093586095477	7954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTATATTCACTTTATAT	6072	False	NA	NA	False	AATAAA	-1	NA	22926526	22932680	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
ENSMUST00000123429.2	chr6	+	691	4	FSM	ENSMUSG00000046323.9	ENSMUST00000123429.2	691	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	513.829413975754	1062	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCGACTCTTTGTAATTTA	1023	False	NA	24	True	AATAAA	-14	NA	122603711	122607231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_122603771_122605535_122605769_122606259_122606296_122606868
ENSMUST00000123460.2	chr4	+	1427	4	FSM	ENSMUSG00000078500.4	ENSMUST00000123460.2	1427	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	71.565044229397	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	NNNNNNNNNNNNNNNNNNNN	NA	False	NA	NA	False	NA	NA	NA	145595363	145626545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_145595513_145618982_145619087_145623213_145623341_145625498
ENSMUST00000123462.8	chrX	+	1144	6	FSM	ENSMUSG00000086877.8	ENSMUST00000123462.8	1144	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	58.2594198391985	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTTATTGTACATCA	NA	False	NA	NA	False	ATTAAA	-17	NA	20827922	20852962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20827952_20828088_20828218_20828775_20828897_20833967_20834048_20851664_20851705_20852217
ENSMUST00000123493.8	chr8	-	1204	10	FSM	ENSMUSG00000038215.16	ENSMUST00000123493.8	1204	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	69.9555414372427	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATATGTGCCGATTTT	NA	False	NA	-5	True	AATAAA	-18	NA	56998500	56984556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_56984768_56985511_56985550_56985810_56985936_56986019_56986071_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439
ENSMUST00000123498.8	chr12	+	2117	11	FSM	ENSMUSG00000047022.19	ENSMUST00000123498.8	2117	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	14.6659469520382	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTGGTATTTTTTAAT	NA	False	NA	NA	False	AATAAA	-31	NA	57277231	57543985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738_57503970_57543243
ENSMUST00000123516.8	chrX	-	1740	7	FSM	ENSMUSG00000044348.15	ENSMUST00000123516.8	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	9.36304793679209	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAGAGATTATCCCTAGT	NA	False	NA	NA	False	NA	NA	NA	135939021	135903531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930849_135933099_135933250_135938914
ENSMUST00000123519.9	chr1	-	983	6	FSM	ENSMUSG00000026095.16	ENSMUST00000123519.9	983	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	221.433872747599	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGGGTGTAGTAGTT	NA	False	NA	-30	True	AATAAA	-13	NA	53391911	53383803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_53384139_53385738_53385921_53387604_53387718_53389145_53389222_53390038_53390093_53391688
ENSMUST00000123558.8	chr11	+	4392	23	FSM	ENSMUSG00000017119.21	ENSMUST00000123558.8	4392	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_21	57.5707434020768	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	978	False	NA	21	True	AATAAA	-24	NA	101443683	101472777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468757_101468864_101471410
ENSMUST00000123605.9	chr8	-	2039	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	0	0	0	0	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAGAATATATTGTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	110335255	110320108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ENSMUST00000123614.8	chr12	+	3168	10	FSM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_5	23.1948270094864	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGACCACTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	84332005	84362606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ENSMUST00000123680.2	chr9	+	695	2	FSM	ENSMUSG00000010607.9	ENSMUST00000123680.2	695	2	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_1	0	3412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTCTAAGATTTGTT	NA	False	NA	44	True	AATAAA	-44	NA	22068141	22069654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_22068210_22069027
ENSMUST00000123694.2	chr5	-	433	3	FSM	ENSMUSG00000034826.15	ENSMUST00000123694.2	433	3	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_1	59	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTACAGACTTGTTGCAG	NA	False	NA	NA	False	NA	NA	NA	92565831	92564067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92564198_92565311_92565423_92565639
ENSMUST00000123701.9	chr11	-	1259	7	FSM	ENSMUSG00000018565.18	ENSMUST00000123701.9	1259	7	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	38.6393581727233	2070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCTGGTAATGCTTA	9889	False	NA	-4	True	AATAAA	-26	NA	69871089	69859053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824
ENSMUST00000123760.8	chr8	+	864	5	FSM	ENSMUSG00000002345.19	ENSMUST00000123760.8	864	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	93.6309243786475	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTTTGACCAGTCTG	8827	False	NA	25	True	AATAAA	-25	NA	70592362	70598199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597147_70597248_70597673
ENSMUST00000123774.2	chr16	-	1308	8	FSM	ENSMUSG00000033809.16	ENSMUST00000123774.2	1308	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	136.842975705734	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429497	20424222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20429292
ENSMUST00000123809.2	chr2	-	647	4	FSM	ENSMUSG00000026761.13	ENSMUST00000123809.2	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_3	31.4572019664107	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTCCCAACTCAGGACTT	NA	False	NA	NA	False	NA	NA	NA	48839244	48826488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_48826875_48827463_48827541_48830344_48830413_48839128
ENSMUST00000123818.2	chr2	-	1082	6	FSM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_4	35.3870032639103	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTGCTTATGTAAAATA	7480	False	NA	NA	False	NA	NA	NA	119448950	119440451	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
ENSMUST00000123826.2	chr18	-	2921	3	FSM	ENSMUSG00000056153.16	ENSMUST00000123826.2	2921	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	105.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCTTTACAGTGTGCT	NA	False	NA	NA	False	AATAGA	-35	NA	88912340	88886297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_88889043_88905336_88905458_88912285
ENSMUST00000123836.2	chrX	-	875	7	FSM	ENSMUSG00000001134.10	ENSMUST00000123836.2	875	7	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_1	60.2699943771544	4110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGATTCAATTGGTAGC	NA	False	NA	NA	False	CATAAA	-22	NA	20828256	20817900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ENSMUST00000123915.2	chrX	-	1025	2	FSM	ENSMUSG00000025289.16	ENSMUST00000123915.2	1025	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAATTAAGGCTATTTTT	NA	False	NA	NA	False	CATAAA	-14	NA	154121470	154119787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_154120451_154121108
ENSMUST00000123952.9	chr4	+	2365	5	FSM	ENSMUSG00000078490.11	ENSMUST00000123952.9	2365	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.5	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTTGCGT	2332	False	NA	NA	False	NA	NA	NA	155493714	155506449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155494028_155500136_155500223_155503076_155503153_155503303_155503448_155504703
ENSMUST00000123959.2	chr3	-	407	2	FSM	ENSMUSG00000000563.18	ENSMUST00000123959.2	407	2	0	0	0	0	multi-exon	FALSE	canonical	3	4727	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCAGATTTCCATCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	105866562	105865906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_105866215_105866463
ENSMUST00000123976.2	chr8	+	756	4	FSM	ENSMUSG00000002345.19	ENSMUST00000123976.2	756	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	5.79271573232759	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCGAGCCTCAGCCAGC	8821	False	NA	11	True	AATAAA	-11	NA	70592356	70598185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673
ENSMUST00000124008.2	chr9	+	2877	8	FSM	ENSMUSG00000034563.17	ENSMUST00000124008.2	2877	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	63.542368960098	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGAGACTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	72892900	72921213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912936_72913175_72917578_72917695_72919211
ENSMUST00000124018.8	chrX	+	839	3	FSM	ENSMUSG00000055188.13	ENSMUST00000124018.8	839	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGAAATATCTTTATT	NA	False	NA	NA	False	AATACA	-14	NA	8011667	8014203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_8011971_8012730_8012858_8013794
ENSMUST00000124035.2	chr7	+	641	4	FSM	ENSMUSG00000040952.17	ENSMUST00000124035.2	641	4	0	0	0	0	multi-exon	FALSE	canonical	3	15652	junction_3	5490.91639791473	1947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTATGCGTCTGTTGAAA	NA	False	NA	NA	False	NA	NA	NA	24584341	24588397	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_24584632_24584876_24584978_24587706_24587891_24588331
ENSMUST00000124195.8	chr5	+	2549	15	FSM	ENSMUSG00000029267.18	ENSMUST00000124195.8	2549	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	705.472066587114	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTTTCAAGCAAAATGTA	NA	False	NA	-38	True	NA	NA	NA	108213576	108255324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108213832_108228690_108228894_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUST00000124200.8	chrX	+	1742	9	FSM	ENSMUSG00000009995.18	ENSMUST00000124200.8	1742	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	66.075241202738	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326355	73333754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332710_73332789_73332904
ENSMUST00000124246.4	chr6	-	1181	2	FSM	ENSMUSG00000086429.10	ENSMUST00000124246.4	1181	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGAATGACTTTTTAAT	NA	False	NA	0	True	NA	NA	NA	113054171	113047358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_113048397_113054028
ENSMUST00000124298.2	chr5	+	743	3	FSM	ENSMUSG00000085227.2	ENSMUST00000124298.2	743	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGACACAAGTTTATATT	6175	False	NA	NA	False	NA	NA	NA	138262304	138264923	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138262364_138264018_138264268_138264488
ENSMUST00000124334.8	chr19	-	2067	16	FSM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_15	11.5573930163049	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAGGTCCTTCTGAAAT	NA	False	NA	2	True	AATAAA	-39	NA	5538430	5532859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
ENSMUST00000124340.8	chr7	+	2556	9	FSM	ENSMUSG00000058454.16	ENSMUST00000124340.8	2556	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	138.760078462791	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTTGTACTGTCTCCT	NA	False	NA	32	True	NA	NA	NA	143383362	143402147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_143383477_143383875_143384003_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ENSMUST00000124403.2	chr2	+	1049	4	FSM	ENSMUSG00000068205.15	ENSMUST00000124403.2	1049	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	35.6495285928003	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGATTCCTGTTTATGCT	NA	False	NA	NA	False	AATAAA	-17	NA	140237379	140262415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_140237623_140242781_140242899_140260736_140260835_140261824
ENSMUST00000124435.8	chr2	-	490	5	FSM	ENSMUSG00000086453.8	ENSMUST00000124435.8	490	5	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	2.27760839478607	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCACGTTCTTAGCCG	2139	False	NA	NA	False	NA	NA	NA	164611539	164596161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_164596225_164601148_164601261_164604463_164604529_164609632_164609834_164611490
ENSMUST00000124436.8	chr6	-	1467	8	FSM	ENSMUSG00000053768.14	ENSMUST00000124436.8	1467	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	306.500990443517	5961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCATTTTCTGACTAAG	NA	False	NA	-17	True	AATAAA	-18	NA	33037171	32769158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945202_32985417_32985500_33026271_33026360_33036934
ENSMUST00000124518.2	chr2	-	2383	13	FSM	ENSMUSG00000027641.14	ENSMUST00000124518.2	2383	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	21.3559450478992	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGACTTGTATACATGT	NA	False	NA	-6	True	NA	NA	NA	157046446	157016905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
ENSMUST00000124533.3	chr7	+	1792	10	FSM	ENSMUSG00000030802.15	ENSMUST00000124533.3	1792	10	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_8	37.2562033943077	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGGCCCCAAATGTTG	NA	False	NA	28	True	ATTAAA	-20	NA	127503933	127507780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092
ENSMUST00000124540.8	chr2	+	837	6	FSM	ENSMUSG00000010911.13	ENSMUST00000124540.8	837	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	142.218704817615	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTTAAATGAGTTGGAA	4613	False	NA	12	True	AATAAA	-34	NA	102904039	102922976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_102904187_102913299_102913401_102918905_102919024_102919747_102919884_102922093_102922262_102922809
ENSMUST00000124546.8	chr5	-	2042	19	FSM	ENSMUSG00000029276.14	ENSMUST00000124546.8	2042	19	0	0	0	0	multi-exon	FALSE	canonical	2	35	junction_18	75.5102805526228	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTCATTATACTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	107745410	107696889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723231_107726316_107726434_107741618_107741745_107744653_107744729_107745254
ENSMUST00000124565.3	chr9	-	711	2	FSM	ENSMUSG00000086158.3	ENSMUST00000124565.3	711	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTGTTTTTTTTTTT	NA	False	NA	1	True	AATAAA	-29	NA	72892658	72887003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_72887479_72892422
ENSMUST00000124610.6	chr5	-	2306	10	FSM	ENSMUSG00000039753.17	ENSMUST00000124610.6	2306	10	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_2	33.8234340562579	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTAAAATGACAAGTTGT	8876	False	NA	NA	False	TTTAAA	-2	NA	43939444	43907947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ENSMUST00000124621.2	chr15	+	513	3	FSM	ENSMUSG00000022201.17	ENSMUST00000124621.2	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	305.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTCCTAGCTGTAA	75	False	NA	NA	False	ACTAAA	-25	NA	12117951	12122423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_12118034_12118324_12118425_12122092
ENSMUST00000124664.8	chr9	+	1285	4	FSM	ENSMUSG00000074039.11	ENSMUST00000124664.8	1285	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	6.12825877028341	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGGACATGGTGAGA	NA	False	NA	NA	False	NA	NA	NA	114197370	114206297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_114197553_114197911_114197968_114198056_114198132_114205325
ENSMUST00000124665.3	chr6	+	2665	13	FSM	ENSMUSG00000051855.16	ENSMUST00000124665.3	2665	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	120.876888701779	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCGGCTTCCCCTCCCCC	0	True	NA	16	True	AATAAA	-22	NA	30738051	30748464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_30738335_30740238_30740343_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ENSMUST00000124699.2	chr11	-	516	2	FSM	ENSMUSG00000020390.13	ENSMUST00000124699.2	516	2	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGGTGTGTTGCAGTGT	NA	False	NA	NA	False	NA	NA	NA	51891306	51888396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_51888726_51891119
ENSMUST00000124745.8	chr8	+	1933	5	FSM	ENSMUSG00000074247.11	ENSMUST00000124745.8	1933	5	0	0	0	0	multi-exon	FALSE	canonical	2	515	junction_4	131.476946648452	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTGTGTATTTTTCTG	NA	False	NA	13	True	NA	NA	NA	71921842	71928742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71921970_71924680_71924762_71924838_71924891_71926418_71926481_71927131
ENSMUST00000124762.2	chr11	+	1427	2	FSM	ENSMUSG00000053574.6	ENSMUST00000124762.2	1427	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTCACTTCTTATTC	NA	False	NA	NA	False	AATAAA	-14	NA	72105997	72109270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_72106828_72108673
ENSMUST00000124764.8	chr8	+	1419	7	FSM	ENSMUSG00000031570.18	ENSMUST00000124764.8	1419	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	20.3141986469235	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGTGTGTGTGAGT	NA	False	NA	17	True	AATAAA	-29	NA	26210087	26214914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_26210179_26210293_26210363_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
ENSMUST00000124790.8	chr8	-	945	3	FSM	ENSMUSG00000079042.11	ENSMUST00000124790.8	945	3	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_2	5	2527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTATGAGTTTATTGTG	NA	False	NA	-24	True	ATTAAA	-18	NA	65489824	65481071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_65481644_65488316_65488407_65489541
ENSMUST00000124818.3	chr11	-	771	3	FSM	ENSMUSG00000085156.9	ENSMUST00000124818.3	771	3	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_1	1	1405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	-1	True	NA	NA	NA	6478766	6475590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6475818_6476354_6476438_6478305
ENSMUST00000124838.2	chr10	-	1525	8	FSM	ENSMUSG00000040006.14	ENSMUST00000124838.2	1525	8	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_3	35.482102415679	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTGCTTTATTT	7489	False	NA	-10	True	AATAAA	-8	NA	7656655	7643719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_7644350_7646120_7646285_7649061_7649196_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
ENSMUST00000124857.8	chr4	+	1931	14	FSM	ENSMUSG00000028687.18	ENSMUST00000124857.8	1931	14	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	30.7380611354533	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAACTTTCTGGGCTTTC	NA	False	NA	33	True	AATAAA	-23	NA	116664934	116676635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675480_116676451
ENSMUST00000124904.8	chrX	+	1744	9	FSM	ENSMUSG00000067768.13	ENSMUST00000124904.8	1744	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	126.780075327316	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257954	72266059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72258088_72258379_72258962_72259091_72259265_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ENSMUST00000124932.2	chr11	+	404	2	FSM	ENSMUSG00000059278.10	ENSMUST00000124932.2	404	2	0	0	0	0	multi-exon	FALSE	canonical	3	1280	junction_1	0	1455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCTGTGTGTAGGT	NA	False	NA	17	True	ATTAAA	-17	NA	69286943	69287506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69287187_69287345
ENSMUST00000124967.2	chr8	-	611	3	FSM	ENSMUSG00000090137.9	ENSMUST00000124967.2	611	3	0	0	0	0	multi-exon	FALSE	canonical	3	22365	junction_1	190	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGCTACGCACGCCTG	NA	False	NA	NA	False	NA	NA	NA	70962595	70961079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70961179_70961945_70962033_70962170
ENSMUST00000124996.8	chr13	+	474	2	FSM	ENSMUSG00000071451.11	ENSMUST00000124996.8	474	2	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	0	1730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCTTCATTTTACTTT	NA	False	NA	17	True	AATAAA	-17	NA	34346946	34362151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_34347233_34361963
ENSMUST00000125040.8	chr16	-	2200	5	FSM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_4	790.763357459107	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55850059	55835868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55849965
ENSMUST00000125049.2	chr2	+	2869	7	FSM	ENSMUSG00000027367.17	ENSMUST00000125049.2	2869	7	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_4	25.3026129524645	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGAGTGTTCATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	127112623	127140852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_127112801_127126014_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
ENSMUST00000125127.8	chr18	+	1683	4	FSM	ENSMUSG00000024571.16	ENSMUST00000125127.8	1683	4	0	0	0	0	multi-exon	FALSE	canonical	3	1096	junction_3	900.996608699993	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACACGTTTGTTGTGGG	NA	False	NA	NA	False	AATAAA	-12	NA	80250012	80255947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_80250117_80250368_80250559_80253276_80253346_80254627
ENSMUST00000125172.8	chr11	+	1799	7	FSM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	0	0	0	0	multi-exon	FALSE	canonical	3	4384	junction_3	774.980806213935	16317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGGTGTGTTTTCAATT	NA	False	NA	11	True	AATAAA	-25	NA	95557782	95571599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ENSMUST00000125183.2	chr3	-	923	3	FSM	ENSMUSG00000028099.9	ENSMUST00000125183.2	923	3	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	7.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGGTGTGTGCCAGT	NA	False	NA	-4	True	AATGAA	-19	NA	96634791	96630738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_96631369_96633149_96633316_96634664
ENSMUST00000125242.8	chr11	-	910	7	FSM	ENSMUSG00000039450.12	ENSMUST00000125242.8	910	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	12.2202018532156	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTGTGTGCTGATTCTC	6915	False	NA	-30	True	AATAAA	-11	NA	120618070	120616250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120616434_120616563_120616682_120616767_120616833_120616913_120617138_120617236_120617392_120617824_120617923_120618003
ENSMUST00000125243.3	chr2	-	1425	14	FSM	ENSMUSG00000061136.17	ENSMUST00000125243.3	1425	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	212.889059087803	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGCAAGATCAAAATA	NA	False	NA	9	True	TATAAA	-25	NA	53081184	53043061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53078459_53078553_53079980_53080113_53081034
ENSMUST00000125257.3	chr8	-	2079	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_9	63.7020456287233	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCTGTTAAATAATTTT	NA	False	NA	-73	True	AATAAA	-18	NA	91860655	91850196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
ENSMUST00000125322.8	chr2	+	3601	6	FSM	ENSMUSG00000036202.17	ENSMUST00000125322.8	3601	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	293.049210884452	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGAGTTTATTTTCT	NA	False	NA	49	True	AATAAA	-26	NA	52000995	52012068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_52003013_52006259_52006407_52006853_52006963_52009028_52009183_52010271_52010381_52011003
ENSMUST00000125349.8	chr2	-	1343	6	FSM	ENSMUSG00000026669.15	ENSMUST00000125349.8	1343	6	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_5	93.7285442114621	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	870	False	NA	0	True	AATAAA	-38	NA	5000705	4995534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531
ENSMUST00000125362.8	chr18	-	2814	4	FSM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	64.5652125115891	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAATTGTTGCCTTTT	NA	False	NA	-5	True	ATTAAA	-25	NA	88912476	88886618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_88889043_88905115_88905190_88905332_88905458_88912285
ENSMUST00000125370.10	chr8	+	2114	15	FSM	ENSMUSG00000001909.17	ENSMUST00000125370.10	2114	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	150.536472629847	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCATTTTGAATT	NA	False	NA	13	True	AATAAA	-13	NA	85416092	85426414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUST00000125374.8	chr6	+	391	3	FSM	ENSMUSG00000085412.8	ENSMUST00000125374.8	391	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	38	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	778	False	NA	NA	False	NA	NA	NA	52079928	52089508	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_52080017_52083750_52083877_52089331
ENSMUST00000125445.8	chr4	-	1851	10	FSM	ENSMUSG00000053730.16	ENSMUST00000125445.8	1851	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	9.25896295822207	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTGTGTCCTGTGATT	10001	False	NA	NA	False	AAAAAG	-21	NA	129590589	129570147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_129570602_129572364_129572486_129578104_129578293_129580563_129580901_129585760_129585916_129586225_129586310_129586428_129586512_129586858_129587079_129587678_129587806_129590507
ENSMUST00000125539.8	chr6	+	699	3	FSM	ENSMUSG00000030291.13	ENSMUST00000125539.8	699	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	124.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTTTTTGTTTGTCCTT	NA	False	NA	36	True	AATAAA	-21	NA	146544044	146552100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_146544151_146550647_146550749_146551608
ENSMUST00000125612.2	chr10	+	1169	8	FSM	ENSMUSG00000020059.10	ENSMUST00000125612.2	1169	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	7.98212288268514	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295525	88309098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537
ENSMUST00000125630.8	chr9	+	1611	14	FSM	ENSMUSG00000041506.16	ENSMUST00000125630.8	1611	14	0	0	0	0	multi-exon	FALSE	canonical	3	1203	junction_10	77.2574272104087	1826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGTTCTCCCTTGTTCC	NA	False	NA	15	True	ATTAAA	-15	NA	106354516	106362615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ENSMUST00000125632.2	chr3	-	478	2	FSM	ENSMUSG00000027752.16	ENSMUST00000125632.2	478	2	0	0	0	0	multi-exon	FALSE	canonical	3	2232	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTCTAGTCCTTACGTT	NA	False	NA	-15	True	AATAAA	-24	NA	54636879	54636101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_54636315_54636614
ENSMUST00000125647.8	chr4	+	1186	9	FSM	ENSMUSG00000028601.19	ENSMUST00000125647.8	1186	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	262.339951208351	2275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTGTGCTGGAATTGTT	NA	False	NA	22	True	AATAAA	-15	NA	108022684	108036503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_108022859_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ENSMUST00000125726.8	chr4	-	807	5	FSM	ENSMUSG00000059291.16	ENSMUST00000125726.8	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	4361.44284469027	55978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACTTGATCCAAAAAGCT	NA	False	NA	-47	True	NA	NA	NA	135780307	135777300	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877
ENSMUST00000125733.8	chr12	-	2526	6	FSM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	6.95701085237043	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGATAAAGGATTTGGGG	7669	False	NA	1	True	AATAAA	-21	NA	87346479	87325411	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
ENSMUST00000125747.8	chrX	-	1737	7	FSM	ENSMUSG00000044348.15	ENSMUST00000125747.8	1737	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	13.5359603361646	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGAGATTATCCCTAGTT	NA	False	NA	NA	False	NA	NA	NA	135938781	135903530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930849_135933099_135933250_135938678
ENSMUST00000125752.3	chr11	-	779	3	FSM	ENSMUSG00000093989.2	ENSMUST00000125752.3	779	3	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	359	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTGTCTGTGCTTTCA	NA	False	NA	-1	True	AATAAA	-20	NA	70130606	70128949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70129297_70129763_70129841_70130251
ENSMUST00000125774.2	chr1	+	1495	7	FSM	ENSMUSG00000026426.11	ENSMUST00000125774.2	1495	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	183.490235889179	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGTGTATGGTGCTGGT	NA	False	NA	15	True	AATAAA	-19	NA	135075406	135084007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_135075466_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
ENSMUST00000125780.2	chr4	+	1065	5	FSM	ENSMUSG00000009863.15	ENSMUST00000125780.2	1065	5	0	0	0	0	multi-exon	FALSE	canonical	3	2820	junction_2	248.862788500009	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCACCACCACTTCAGACA	NA	False	NA	NA	False	NA	NA	NA	140688713	140701608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974
ENSMUST00000125784.8	chr10	+	3392	13	FSM	ENSMUSG00000020156.17	ENSMUST00000125784.8	3392	13	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	107.02790394202	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8439	False	NA	16	True	TATAAA	-14	NA	80062488	80079734	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80062539_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ENSMUST00000125785.8	chr4	+	585	4	FSM	ENSMUSG00000087207.9	ENSMUST00000125785.8	585	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	228.391476782008	430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACAGTGTAAGTTTGTT	4110	False	NA	NA	False	AATACA	-9	NA	147314740	147343085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_147314893_147316807_147316901_147337753_147337859_147342850
ENSMUST00000125786.8	chr4	+	2937	8	FSM	ENSMUSG00000059939.14	ENSMUST00000125786.8	2937	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	44.3313129302804	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8258	False	NA	22	True	NA	NA	NA	156194441	156211722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208580_156209873
ENSMUST00000125841.3	chr2	+	525	4	FSM	ENSMUSG00000074578.15	ENSMUST00000125841.3	525	4	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	54.7783412186483	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCAGCCCCACAAGGCT	NA	False	NA	NA	False	AATACA	-21	NA	166905142	166907642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_166905218_166905555_166905648_166907078_166907401_166907606
ENSMUST00000125851.2	chr2	-	866	4	FSM	ENSMUSG00000026669.15	ENSMUST00000125851.2	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_3	90.1566537878499	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCGCGCGCGTGTGTGTGTG	NA	False	NA	NA	False	AATACA	-15	NA	5017526	5011808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_5012244_5013290_5013624_5015499_5015587_5017515
ENSMUST00000125854.8	chr2	+	582	4	FSM	ENSMUSG00000086454.8	ENSMUST00000125854.8	582	4	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_3	243.142390837596	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGGTTCAAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	104389528	104401774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_104389552_104390068_104390321_104398205_104398278_104401539
ENSMUST00000125861.2	chr7	+	546	2	FSM	ENSMUSG00000030805.15	ENSMUST00000125861.2	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTGCAGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	127447562	127448191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127447840_127447922
ENSMUST00000125894.9	chr6	-	1216	11	FSM	ENSMUSG00000030032.15	ENSMUST00000125894.9	1216	11	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_10	9.65453261426984	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGTCTGAGCACTCAG	9882	False	NA	0	True	TATAAA	-18	NA	83133379	83129690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83129879_83129956_83130032_83130234_83130398_83130497_83130599_83131481_83131610_83131903_83131958_83132051_83132119_83132459_83132523_83132630_83132854_83133156_83133228_83133296
ENSMUST00000125913.2	chr2	+	1200	11	FSM	ENSMUSG00000027384.7	ENSMUST00000125913.2	1200	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	77.5835678478375	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTATGTTTCCCAGAA	NA	False	NA	11	True	AATAAA	-11	NA	140012949	140045552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_140013326_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
ENSMUST00000125929.2	chr11	+	779	2	FSM	ENSMUSG00000020456.18	ENSMUST00000125929.2	779	2	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTGTTTCTATTTTT	NA	False	NA	NA	False	TATAAA	-12	NA	6241640	6247677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_6241694_6246951
ENSMUST00000125982.2	chr11	-	605	4	FSM	ENSMUSG00000000753.16	ENSMUST00000125982.2	605	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	3.39934634239519	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGCGTGAAGTTGCT	5527	False	NA	NA	False	NA	NA	NA	75313378	75306295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_75306557_75307055_75307255_75308734_75308823_75313321
ENSMUST00000126062.2	chr9	-	823	3	FSM	ENSMUSG00000011114.19	ENSMUST00000126062.2	823	3	0	0	0	0	multi-exon	FALSE	canonical	3	1703	junction_2	71.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGCATATTAAACTGGTT	NA	False	NA	NA	False	NA	NA	NA	37568464	37565151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_37565733_37566317_37566389_37568293
ENSMUST00000126071.9	chr13	+	4322	11	FSM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	132.701770900015	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCAGCTGTGGGTCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	54769596	54811876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ENSMUST00000126112.8	chr2	-	3360	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTCTTAAAATGATTTT	NA	False	NA	-9	True	AATAAA	-25	NA	22930207	22830084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ENSMUST00000126116.3	chr7	-	1429	11	FSM	ENSMUSG00000001794.14	ENSMUST00000126116.3	1429	11	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_10	279.009032111866	2117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTAACTTGGTTATTT	NA	False	NA	-9	True	NA	NA	NA	29894473	29886367	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430
ENSMUST00000126117.2	chrX	-	2220	3	FSM	ENSMUSG00000015290.16	ENSMUST00000126117.2	2220	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	782.5	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGAATCCTGTGTAAT	NA	False	NA	-7	True	AATAAA	-19	NA	73412164	73409324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_73411193_73411306_73411516_73412021
ENSMUST00000126213.8	chr7	+	744	4	FSM	ENSMUSG00000015980.15	ENSMUST00000126213.8	744	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.55902608401044	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAAACTGTTCTCTTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	138813858	138822887	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_138814008_138816785_138816905_138818491_138818616_138822535
ENSMUST00000126231.2	chr4	+	630	2	FSM	ENSMUSG00000085761.2	ENSMUST00000126231.2	630	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTTTGTAAAGTTCTG	NA	False	NA	NA	False	CATAAA	-12	NA	141745208	141756307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_141745442_141755910
ENSMUST00000126245.2	chr3	-	1875	14	FSM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_13	37.3331396162909	1605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACGCATTTGTACATTTA	NA	False	NA	-7	True	AATAAA	-44	NA	88821306	88816921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ENSMUST00000126246.2	chr2	-	296	2	FSM	ENSMUSG00000062997.7	ENSMUST00000126246.2	296	2	0	0	0	0	multi-exon	FALSE	canonical	3	27807	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCATGGTGGTGCCGCCT	NA	False	NA	NA	False	NA	NA	NA	38895134	38894623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_38894881_38895095
ENSMUST00000126283.8	chrX	-	2153	7	FSM	ENSMUSG00000034457.11	ENSMUST00000126283.8	2153	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	9.18331820930394	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTCACAAGTGTAAAAAGC	NA	False	NA	NA	False	ATTAAA	-17	NA	96420822	96381396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
ENSMUST00000126286.8	chrX	+	1449	4	FSM	ENSMUSG00000087193.8	ENSMUST00000126286.8	1449	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	38.6091526281874	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGCCACTGGATTTT	7727	False	NA	29	True	TATAAA	-19	NA	7915486	7939198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7915823_7926454_7926526_7936874_7937304_7938585
ENSMUST00000126299.2	chr11	-	3269	16	FSM	ENSMUSG00000020918.15	ENSMUST00000126299.2	3269	16	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_8	109.540170206591	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	6795	False	NA	-1	True	AATAAA	-18	NA	100603275	100595571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ENSMUST00000126372.2	chr3	+	426	3	FSM	ENSMUSG00000028047.12	ENSMUST00000126372.2	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	4	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCAGGGAAGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	89132483	89133870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89132732_89133610_89133751_89133832
ENSMUST00000126380.4	chr4	+	1213	3	FSM	ENSMUSG00000086290.10	ENSMUST00000126380.4	1213	3	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	32	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	False	NA	27	True	AATAAA	-16	NA	132035945	132038335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132036219_132037148_132037215_132037461
ENSMUST00000126386.8	chr11	-	1030	7	FSM	ENSMUSG00000019303.15	ENSMUST00000126386.8	1030	7	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_2	24.7571538482651	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCAGATATCAAACCTGG	NA	False	NA	4	True	TATAAA	-30	NA	100986226	100982957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983
ENSMUST00000126419.2	chr16	+	452	3	FSM	ENSMUSG00000098274.8	ENSMUST00000126419.2	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	12575	junction_2	818.5	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACAATTTATTGTGTTT	NA	False	NA	NA	False	AATACA	-36	NA	55786909	55790137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_55786986_55787422_55787534_55789872
ENSMUST00000126432.9	chr18	+	737	6	FSM	ENSMUSG00000024516.14	ENSMUST00000126432.9	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	146.338511677548	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTGTGGCCTCTGA	NA	False	NA	NA	False	AATAAA	-21	NA	65933616	65950736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_65933783_65942515_65942626_65945735_65945813_65947908_65948029_65949891_65949950_65950530
ENSMUST00000126472.2	chr5	-	370	3	FSM	ENSMUSG00000072591.11	ENSMUST00000126472.2	370	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGGTGGTGGAGGTAT	NA	False	NA	NA	False	NA	NA	NA	128677718	128661243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_128661361_128662335_128662471_128677600
ENSMUST00000126503.2	chr2	+	658	3	FSM	ENSMUSG00000051329.14	ENSMUST00000126503.2	658	3	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_1	124	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTTTATCTGCAAACAGA	NA	False	NA	NA	False	TTTAAA	-12	NA	90563067	90566128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_90563251_90563449_90563555_90565758
ENSMUST00000126505.3	chr17	+	1139	7	FSM	ENSMUSG00000024191.16	ENSMUST00000126505.3	1139	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	45.097733374922	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTGGTAAATGCTTAAC	2007	False	NA	15	True	AATAAA	-15	NA	27000052	27011495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_27000151_27001551_27001606_27002418_27002512_27005670_27005763_27008668_27008771_27009899_27010019_27010914
ENSMUST00000126523.9	chr18	+	1282	9	FSM	ENSMUSG00000024410.16	ENSMUST00000126523.9	1282	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_6	11.1740491765519	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTTGATTTGATGTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	12301773	12314177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722
ENSMUST00000126529.2	chr17	-	1335	3	FSM	ENSMUSG00000024048.16	ENSMUST00000126529.2	1335	3	0	0	0	0	multi-exon	FALSE	canonical	3	3116	junction_2	53	2163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGTTGTTTAGCGTTA	2316	False	NA	-19	True	ATTAAA	-14	NA	71309160	71301288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_71301780_71303104_71303891_71309102
ENSMUST00000126591.2	chrX	-	712	4	FSM	ENSMUSG00000086807.9	ENSMUST00000126591.2	712	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	6.59966329107444	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCCAGTTTGAGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	138258487	138248239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_138248639_138255751_138255851_138257038_138257123_138258357
ENSMUST00000126608.2	chrX	+	989	2	FSM	ENSMUSG00000016319.4	ENSMUST00000126608.2	989	2	0	0	0	0	multi-exon	FALSE	canonical	3	12606	junction_1	0	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAGCTTGTGGTAGATA	NA	False	NA	NA	False	NA	NA	NA	36059306	36061296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36059495_36060495
ENSMUST00000126639.2	chr5	-	685	3	FSM	ENSMUSG00000051391.10	ENSMUST00000126639.2	685	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCAGCTGGAGTCCATGT	NA	False	NA	NA	False	ATTAAA	-9	NA	135963470	135959538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_135959804_135961370_135961497_135963176
ENSMUST00000126641.2	chr4	+	3754	6	FSM	ENSMUSG00000028676.18	ENSMUST00000126641.2	3754	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	623.730198082472	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4321	False	NA	23	True	AATAAA	-28	NA	135583057	135597219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_135583603_135585615_135585721_135589084_135589189_135590350_135590514_135590833_135590888_135594436
ENSMUST00000126661.2	chr11	+	382	2	FSM	ENSMUSG00000020818.17	ENSMUST00000126661.2	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCAAGATTGCACCTCCT	NA	False	NA	5	True	AATAAA	-18	NA	116744604	116745082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116744730_116744825
ENSMUST00000126690.8	chr9	-	4206	8	FSM	ENSMUSG00000036986.17	ENSMUST00000126690.8	4206	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	129.417848814747	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACCCTAACATTCTGAT	2272	False	NA	-12	True	AGTAAA	-12	NA	58156948	58125369	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ENSMUST00000126705.9	chr8	+	895	5	FSM	ENSMUSG00000014856.13	ENSMUST00000126705.9	895	5	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_2	13.1909059582729	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACGGCCGTGTGGGTGA	1	True	NA	13	True	AATAAA	-15	NA	106053019	106055684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055325_106055403
ENSMUST00000126737.8	chr11	+	4577	11	FSM	ENSMUSG00000007850.17	ENSMUST00000126737.8	4577	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_10	143.416038154734	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268577	50277355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50276603
ENSMUST00000126739.2	chr1	-	2780	2	FSM	ENSMUSG00000044783.17	ENSMUST00000126739.2	2780	2	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGCCTCTTTTCTTCCTC	8645	False	NA	NA	False	AAGAAA	-10	NA	88205301	88202433	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_88205008_88205095
ENSMUST00000126751.2	chr10	+	478	3	FSM	ENSMUSG00000025393.13	ENSMUST00000126751.2	478	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5636	2702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCTGTTTATGTTGC	NA	False	NA	22	True	AATAAA	-15	NA	127924420	127926142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127924442_127924825_127925028_127925887
ENSMUST00000126763.3	chr2	+	636	5	FSM	ENSMUSG00000008333.13	ENSMUST00000126763.3	636	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	449.346469887102	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTTTCCCTCCACAGT	2080	False	NA	NA	False	NA	NA	NA	142905050	142911344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_142905233_142906461_142906551_142907095_142907269_142910180_142910322_142911293
ENSMUST00000126794.2	chr7	+	312	3	FSM	ENSMUSG00000030432.13	ENSMUST00000126794.2	312	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	3317	2094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	3412	False	NA	17	True	AATAAA	-32	NA	4796591	4797561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_4796626_4797048_4797182_4797416
ENSMUST00000126874.2	chr11	+	1552	7	FSM	ENSMUSG00000020877.12	ENSMUST00000126874.2	1552	7	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	9.66810334151545	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTGAACTGGATCTCA	NA	False	NA	9	True	AATAAA	-15	NA	96920826	96924776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_96920882_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96924056_96924144_96924326_96924491
ENSMUST00000126879.8	chr13	+	2909	8	FSM	ENSMUSG00000021514.19	ENSMUST00000126879.8	2909	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	11.5564276663752	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATACCCTCCCCCCACCC	NA	False	NA	NA	False	NA	NA	NA	65426627	65445609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65443876
ENSMUST00000126909.8	chr2	+	1554	8	FSM	ENSMUSG00000026975.11	ENSMUST00000126909.8	1554	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	38.473950901346	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTATGCATCTGT	NA	False	NA	34	True	ATTAAA	-37	NA	24852433	24862173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_24852638_24853034_24853169_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
ENSMUST00000126947.8	chr2	+	2519	5	FSM	ENSMUSG00000014873.16	ENSMUST00000126947.8	2519	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_4	33.741665637606	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGCCAAACCAATATGT	NA	False	NA	26	True	CATAAA	-21	NA	26806392	26810184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_26806516_26806716_26806872_26807439_26809068_26809203_26809371_26809738
ENSMUST00000126993.8	chr17	-	2332	12	FSM	ENSMUSG00000024008.17	ENSMUST00000126993.8	2332	12	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_8	10.8025096563731	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGACCCCCCCTCTCC	8124	False	NA	-9	True	AGTAAA	-14	NA	29403077	29376889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896
ENSMUST00000127027.2	chr17	+	2667	4	FSM	ENSMUSG00000096696.2	ENSMUST00000127027.2	2667	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_3	31.9826341768293	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGATGCAACATAGTTT	NA	False	NA	NA	False	NA	NA	NA	17284374	17309890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505
ENSMUST00000127071.2	chr19	+	869	2	FSM	ENSMUSG00000024925.12	ENSMUST00000127071.2	869	2	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGTCACAGATCCCTTC	5059	False	NA	-63	True	NA	NA	NA	5651914	5652895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5652109_5652220
ENSMUST00000127084.8	chr2	-	1758	10	FSM	ENSMUSG00000027195.11	ENSMUST00000127084.8	1758	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	235.021879727436	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGAAATGAAAGTGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	93988254	93863046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93947774_93947822_93988054
ENSMUST00000127234.8	chr18	+	1755	4	FSM	ENSMUSG00000024571.16	ENSMUST00000127234.8	1755	4	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	451.424658411813	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTGGGAATTCATTG	NA	False	NA	NA	False	AATAAA	-21	NA	80250109	80255956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_80250277_80250368_80250559_80253276_80253346_80254627
ENSMUST00000127239.8	chr16	+	2805	11	FSM	ENSMUSG00000022721.20	ENSMUST00000127239.8	2805	11	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_9	16.6400120192264	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	65	False	NA	8	True	AATAAA	-22	NA	18066542	18071366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ENSMUST00000127243.8	chr2	-	1162	6	FSM	ENSMUSG00000005233.17	ENSMUST00000127243.8	1162	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	347.700215703125	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	False	NA	-10	True	NA	NA	NA	69036501	69024238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69036407
ENSMUST00000127252.8	chr2	+	2314	17	FSM	ENSMUSG00000027642.16	ENSMUST00000127252.8	2314	17	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	580.610235953303	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121345	157167976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_157121444_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ENSMUST00000127270.2	chr11	-	588	4	FSM	ENSMUSG00000058546.9	ENSMUST00000127270.2	588	4	0	0	0	0	multi-exon	FALSE	canonical	3	10927	junction_1	3582.37128170713	26936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTGTCATTTGTCGC	6470	False	NA	-11	True	CATAAA	-4	NA	78073903	78071757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628
ENSMUST00000127309.8	chr2	-	2123	10	FSM	ENSMUSG00000039660.17	ENSMUST00000127309.8	2123	10	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_5	42.729409885181	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCACCTATGCTCACGT	NA	False	NA	-10	True	AATAAA	-33	NA	30068454	30063464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067978_30068401
ENSMUST00000127369.2	chr11	+	681	2	FSM	ENSMUSG00000020808.4	ENSMUST00000127369.2	681	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGATCACTCAGGAAAGGG	NA	False	NA	NA	False	GATAAA	-26	NA	71933327	71934490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_71933361_71933842
ENSMUST00000127404.8	chrX	-	816	4	FSM	ENSMUSG00000072955.15	ENSMUST00000127404.8	816	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	61.5918465022405	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTGAGCAGATTGCACA	NA	False	NA	NA	False	AATAAA	-17	NA	135877618	135855736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135856232_135857483_135857589_135876146_135876252_135877507
ENSMUST00000127405.2	chr11	+	1042	4	FSM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	0	0	0	0	multi-exon	FALSE	canonical	3	5273	junction_1	70.8723421998235	20197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTCAGTTCTAACGGGT	NA	False	NA	NA	False	TATAAA	-3	NA	51510561	51514541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918
ENSMUST00000127439.2	chr10	+	343	2	FSM	ENSMUSG00000025393.13	ENSMUST00000127439.2	343	2	0	0	0	0	multi-exon	FALSE	canonical	3	10408	junction_1	0	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGAGGTGGGAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	127919174	127919955	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127919323_127919760
ENSMUST00000127454.8	chr16	-	1132	7	FSM	ENSMUSG00000033809.16	ENSMUST00000127454.8	1132	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	157.124154731219	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGTGCAGCATACATAA	NA	False	NA	-8	True	AATAAA	-15	NA	20429481	20424221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427491_20427640_20429292
ENSMUST00000127477.8	chr3	+	1079	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	0	0	0	0	multi-exon	FALSE	canonical	3	2813	junction_1	66.9226419084005	13901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTGCTTTACTTTTGG	NA	False	NA	10	True	AATAAA	-24	NA	32791138	32805715	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ENSMUST00000127490.8	chr8	+	1643	5	FSM	ENSMUSG00000036810.17	ENSMUST00000127490.8	1643	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	72.261244799685	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGGTTAGAGATTTTCT	NA	False	NA	13	True	AATAAA	-15	NA	88845414	88861738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_88845498_88846407_88846480_88856322_88856433_88856974_88857030_88860415
ENSMUST00000127502.2	chr16	+	791	4	FSM	ENSMUSG00000022912.9	ENSMUST00000127502.2	791	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	164.345841308977	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGAAACACTTAAATTTC	NA	False	NA	46	True	ATTAAA	-10	NA	62741829	62748753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_62741888_62744878_62745028_62746690_62746917_62748395
ENSMUST00000127505.8	chr8	+	1927	11	FSM	ENSMUSG00000005481.19	ENSMUST00000127505.8	1927	11	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	947.235852362019	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCATGGCTCCAGCCCC	NA	False	NA	25	True	AATAAA	-11	NA	84441896	84449903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448094_84448154_84448362_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUST00000127535.2	chrX	-	457	2	FSM	ENSMUSG00000031299.11	ENSMUST00000127535.2	457	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAATCAAAGTTTCTATA	NA	False	NA	NA	False	AATAAA	-10	NA	158921352	158919892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_158920249_158921251
ENSMUST00000127587.8	chr11	+	1412	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTCTTAATTGCTCAGA	NA	False	NA	52	True	NA	NA	NA	78069510	78071646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
ENSMUST00000127605.8	chr19	-	1753	15	FSM	ENSMUSG00000024830.18	ENSMUST00000127605.8	1753	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	26.377556941538	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGCTTTTGCCGGACTC	2807	False	NA	1	True	AGTAAA	-17	NA	4213295	4206790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208717_4208801_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
ENSMUST00000127628.6	chr5	-	1481	7	FSM	ENSMUSG00000033434.16	ENSMUST00000127628.6	1481	7	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	14.1234635349203	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGGCCTGGTTTTGTAT	NA	False	NA	-8	True	ATTAAA	-24	NA	110255068	110251844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518
ENSMUST00000127630.8	chr2	+	2240	8	FSM	ENSMUSG00000027160.17	ENSMUST00000127630.8	2240	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	236.291846526057	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCATTTTTTTTAGAAGT	NA	False	NA	NA	False	AATAAA	-22	NA	109848324	109875667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109867749_109867880_109868424_109868622_109870918_109871078_109871605_109871748_109874531
ENSMUST00000127638.8	chr11	-	4516	24	FSM	ENSMUSG00000004040.17	ENSMUST00000127638.8	4516	24	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_2	54.0525544164325	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	100830366	100777635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ENSMUST00000127647.3	chr17	+	1002	5	FSM	ENSMUSG00000024181.10	ENSMUST00000127647.3	1002	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	671.536670629386	1973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342517	26345587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344473_26344539_26345244
ENSMUST00000127652.2	chr4	+	1332	8	FSM	ENSMUSG00000028618.12	ENSMUST00000127652.2	1332	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	584.439518701814	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGAGTGTTGGGCTTT	72	False	NA	13	True	ATTAAA	-25	NA	107036214	107058191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_107036293_107042974_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ENSMUST00000127666.8	chr6	-	734	8	FSM	ENSMUSG00000053768.14	ENSMUST00000127666.8	734	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	396.12206941491	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATCCTCCAGTGTTAC	NA	False	NA	NA	False	NA	NA	NA	33037172	32780922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_32780961_32829079_32829151_32869226_32869311_32870326_32870342_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ENSMUST00000127698.8	chr10	-	2873	7	FSM	ENSMUSG00000071359.14	ENSMUST00000127698.8	2873	7	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	20.3367483471014	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTAAGTATTCCCCCT	NA	False	NA	-7	True	AATAAA	-21	NA	22607346	22579777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
ENSMUST00000127791.2	chr12	+	228	2	FSM	ENSMUSG00000051890.14	ENSMUST00000127791.2	228	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGGTCCGAGTGGGTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	69288687	69289416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_69288788_69289288
ENSMUST00000127793.2	chr8	-	646	3	FSM	ENSMUSG00000090137.9	ENSMUST00000127793.2	646	3	0	0	0	0	multi-exon	FALSE	canonical	3	14257	junction_2	4054	88335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTCTAGAGTGACTG	NA	False	NA	-5	True	AATAAA	-27	NA	70963029	70960913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70961179_70961945_70962285_70962987
ENSMUST00000127826.2	chr4	-	1756	2	FSM	ENSMUSG00000066000.13	ENSMUST00000127826.2	1756	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAATAAAAATTGCTGT	NA	False	NA	NA	False	NA	NA	NA	147726965	147723851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147725463_147726820
ENSMUST00000127874.6	chr5	-	2690	3	FSM	ENSMUSG00000047215.15	ENSMUST00000127874.6	2690	3	0	0	0	0	multi-exon	FALSE	canonical	3	9546	junction_2	1700	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548742	65545706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65547827_65548081_65548198_65548288
ENSMUST00000127878.2	chr19	+	1026	3	FSM	ENSMUSG00000036372.15	ENSMUST00000127878.2	1026	3	0	0	0	0	multi-exon	FALSE	canonical	3	2797	junction_1	181	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCCTCATGTCCATTC	4181	False	NA	27	True	AATAAA	-16	NA	10181581	10185182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10181629_10183787_10184665_10185080
ENSMUST00000127896.8	chr9	+	575	5	FSM	ENSMUSG00000036781.14	ENSMUST00000127896.8	575	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	5596.89320069626	47190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCCTCCCTCTGCTTCT	NA	False	NA	32	True	AATAAA	-16	NA	66853372	66856796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66855920_66856000_66856610
ENSMUST00000127939.2	chr2	+	1985	5	FSM	ENSMUSG00000006418.18	ENSMUST00000127939.2	1985	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	262.348051260153	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTAAGCTGCAATGTT	NA	False	NA	15	True	AATAAA	-16	NA	167345365	167358084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_167345522_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ENSMUST00000127962.2	chr4	-	468	3	FSM	ENSMUSG00000058579.6	ENSMUST00000127962.2	468	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	12.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAATGAGTCTGTCTT	535	False	NA	-2	True	AATAAA	-18	NA	141546513	141542272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_141542367_141545175_141545329_141546292
ENSMUST00000127988.8	chr2	-	2447	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAGTTAGCCAGTCACA	6076	False	NA	30	True	AATAAA	-14	NA	181007197	180999625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ENSMUST00000127996.8	chr9	-	2289	11	FSM	ENSMUSG00000039048.16	ENSMUST00000127996.8	2289	11	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_9	18.9747200242849	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122351	35115503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
ENSMUST00000128010.2	chr4	-	2227	8	FSM	ENSMUSG00000028692.15	ENSMUST00000128010.2	2227	8	0	0	0	0	multi-exon	FALSE	canonical	3	1447	junction_2	89.468042407582	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGTTGTGTGCCTGACTT	NA	False	NA	-2	True	AATAAA	-14	NA	116508593	116493707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
ENSMUST00000128041.8	chr19	+	2223	9	FSM	ENSMUSG00000025227.15	ENSMUST00000128041.8	2223	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	81.7953811348783	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	824	False	NA	13	True	AGTAAA	-13	NA	46329559	46363691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_46329610_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ENSMUST00000128125.2	chr9	-	1241	3	FSM	ENSMUSG00000074284.7	ENSMUST00000128125.2	1241	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAGACTGAAACAGGATC	NA	False	NA	NA	False	NA	NA	NA	56979091	56963913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_56964423_56964552_56965086_56978892
ENSMUST00000128136.8	chrX	-	3480	10	FSM	ENSMUSG00000031386.15	ENSMUST00000128136.8	3480	10	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	130.872287194637	448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	-13	True	ATTAAA	-20	NA	72992859	72986400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991124_72991447_72991893_72992507_72992672_72992803
ENSMUST00000128158.8	chr12	+	656	4	FSM	ENSMUSG00000072946.13	ENSMUST00000128158.8	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	9.0921211313239	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGTCTTTTTTTACTT	NA	False	NA	NA	False	TATAAA	-45	NA	84332154	84345140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784
ENSMUST00000128174.2	chr7	-	932	4	FSM	ENSMUSG00000030744.14	ENSMUST00000128174.2	932	4	0	0	0	0	multi-exon	FALSE	canonical	3	13120	junction_3	648.329820041895	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCAGTGATGACACGAT	8439	False	NA	NA	False	NA	NA	NA	99132841	99128916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_99129271_99130903_99130999_99131467_99131908_99132798
ENSMUST00000128201.2	chr8	+	1535	7	FSM	ENSMUSG00000060098.12	ENSMUST00000128201.2	1535	7	0	0	0	0	multi-exon	FALSE	canonical	3	1023	junction_6	42.8501912351496	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAATACTATATTTTAC	3409	False	NA	NA	False	AATAAA	-19	NA	106939157	106964691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853
ENSMUST00000128210.2	chr2	+	2417	17	FSM	ENSMUSG00000027429.17	ENSMUST00000128210.2	2417	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	148.278967975064	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTTTGTCTCATTTT	NA	False	NA	NA	False	AATAAA	-37	NA	144406818	144432669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144406924_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ENSMUST00000128243.2	chr2	-	1008	2	FSM	ENSMUSG00000027620.17	ENSMUST00000128243.2	1008	2	0	0	0	0	multi-exon	FALSE	canonical	3	2349	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAGGAAAAAAAACC	NA	False	NA	-32	True	AATAGA	-8	NA	156022132	156020478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_156021161_156021806
ENSMUST00000128253.2	chr1	-	349	2	FSM	ENSMUSG00000026274.12	ENSMUST00000128253.2	349	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTACCTTTGAGCCCA	NA	False	NA	NA	False	NA	NA	NA	93271204	93265170	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_93265303_93270987
ENSMUST00000128287.2	chr4	+	647	3	FSM	ENSMUSG00000028811.13	ENSMUST00000128287.2	647	3	0	0	0	0	multi-exon	FALSE	canonical	3	1802	junction_1	30	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAAAAATATACTGGCTC	855	False	NA	NA	False	ATTAAA	-32	NA	129083694	129091234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129083866_129090622_129090770_129090905
ENSMUST00000128406.8	chr2	+	2724	7	FSM	ENSMUSG00000028640.12	ENSMUST00000128406.8	2724	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	241.022589997056	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAATCTCTGAAAGTCTG	NA	False	NA	10	True	AATAAA	-12	NA	172392572	172400527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_172392764_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ENSMUST00000128420.9	chr7	+	1451	13	FSM	ENSMUSG00000006599.14	ENSMUST00000128420.9	1451	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	158.346402969355	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTTTATGGTGCTCACAG	NA	False	NA	NA	False	NA	NA	NA	46451110	46472333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_46451265_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ENSMUST00000128467.4	chr2	-	772	6	FSM	ENSMUSG00000039128.14	ENSMUST00000128467.4	772	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	388.054326093654	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCATCATTGCTTTTTA	6462	False	NA	2	True	AATACA	-18	NA	5838489	5814365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_5814830_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466
ENSMUST00000128475.9	chr15	+	1115	7	FSM	ENSMUSG00000022201.17	ENSMUST00000128475.9	1115	7	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_4	46.1483116339771	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAGAAACATAAAAAAAAGG	60	False	NA	NA	False	TATAAA	-15	NA	12117936	12149636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613
ENSMUST00000128490.9	chr14	+	2660	14	FSM	ENSMUSG00000022214.16	ENSMUST00000128490.9	2660	14	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	16.6800735031656	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55798427	55807521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUST00000128519.8	chr11	-	1845	10	FSM	ENSMUSG00000059796.17	ENSMUST00000128519.8	1845	10	0	0	0	0	multi-exon	TRUE	canonical	3	9657	junction_9	1461.90417007037	14952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGCTTCTTGTTTCTT	NA	False	NA	64	True	AATAAA	-19	NA	69563143	69557761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ENSMUST00000128527.8	chr7	-	549	5	FSM	ENSMUSG00000025466.20	ENSMUST00000128527.8	549	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	196.811457999782	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAACCGGGTGAGTGTGT	1568	False	NA	NA	False	AAAAAG	-14	NA	139682257	139679801	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_139680074_139681002_139681102_139681244_139681316_139681513_139681583_139682219
ENSMUST00000128548.2	chr4	-	1654	3	FSM	ENSMUSG00000038544.15	ENSMUST00000128548.2	1654	3	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_2	17	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTTATATAATTATTTT	0	True	NA	NA	False	AATAAA	-20	NA	59783838	59774087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_59775550_59782253_59782335_59783727
ENSMUST00000128557.3	chr8	+	3977	2	FSM	ENSMUSG00000047710.9	ENSMUST00000128557.3	3977	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTGTACTTAATTT	NA	False	NA	17	True	ATTAAA	-19	NA	13919703	13931639	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_13919839_13927797
ENSMUST00000128571.2	chrX	-	540	2	FSM	ENSMUSG00000063018.7	ENSMUST00000128571.2	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTGTGGCTTATTAT	NA	False	NA	-28	True	NA	NA	NA	7289227	7278341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_7278772_7289117
ENSMUST00000128727.8	chr5	+	2031	11	FSM	ENSMUSG00000056367.15	ENSMUST00000128727.8	2031	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	35.2080956599473	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTTCCTTGTGGTCTC	NA	False	NA	10	True	AATAAA	-18	NA	25964994	26055686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_25965127_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
ENSMUST00000128754.8	chr4	-	2595	4	FSM	ENSMUSG00000051517.15	ENSMUST00000128754.8	2595	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	13.1233464566864	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTCCTGTCTAAAT	28	True	NA	-7	True	AATAAA	-14	NA	43499619	43496145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_43498030_43498585_43498705_43498895_43499338_43499469
ENSMUST00000128784.2	chr11	+	585	2	FSM	ENSMUSG00000090266.11	ENSMUST00000128784.2	585	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCAAAGTCTATGCAAT	8951	False	NA	24	True	AATAAA	-29	NA	116734386	116736959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116734601_116736588
ENSMUST00000128788.8	chr11	+	1141	6	FSM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	100.921751867474	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGTGTGCATTATTT	NA	False	NA	24	True	AATAAA	-33	NA	78427186	78432563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
ENSMUST00000128830.5	chr5	+	575	4	FSM	ENSMUSG00000060152.15	ENSMUST00000128830.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	380.536755415587	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGAATAAACATTCCTAAA	NA	False	NA	-11	True	NA	NA	NA	115376093	115379003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_115376129_115378220_115378371_115378531_115378616_115378697
ENSMUST00000128833.2	chr8	-	471	4	FSM	ENSMUSG00000035439.14	ENSMUST00000128833.2	471	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	232.32496398125	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCTTAACAAAATGTGTG	714	False	NA	NA	False	NA	NA	NA	71725002	71712870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71713155_71715695_71715749_71721869_71721929_71724927
ENSMUST00000128924.2	chr1	+	762	5	FSM	ENSMUSG00000026339.19	ENSMUST00000128924.2	762	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	38.3861954353385	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTTGAGGATGTGAG	NA	False	NA	NA	False	AATAAA	-16	NA	121358836	121371751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121371460
ENSMUST00000128952.8	chr11	+	500	3	FSM	ENSMUSG00000060938.15	ENSMUST00000128952.8	500	3	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	8462	1955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGTTTTTGAAGGAGG	NA	False	NA	NA	False	NA	NA	NA	68792452	68794145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_68792639_68793095_68793269_68794004
ENSMUST00000128955.2	chr9	-	325	2	FSM	ENSMUSG00000051234.7	ENSMUST00000128955.2	325	2	0	0	0	0	multi-exon	FALSE	canonical	3	1105	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGCTGTGGTAACCCAGG	3800	False	NA	NA	False	ATTAAA	-15	NA	96360641	96355914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_96356059_96360460
ENSMUST00000128968.8	chrX	-	3233	8	FSM	ENSMUSG00000031229.17	ENSMUST00000128968.8	3233	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	94.231802768817	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAGGAAGAATTATCT	NA	False	NA	NA	False	GATAAA	-8	NA	104972972	104918735	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_104921180_104921972_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
ENSMUST00000128972.9	chr8	-	1141	7	FSM	ENSMUSG00000052926.17	ENSMUST00000128972.9	1141	7	0	0	0	0	multi-exon	FALSE	canonical	3	1021	junction_4	88.9793983646402	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	8230	False	NA	-8	True	AATAAA	-14	NA	85692693	85684295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ENSMUST00000129016.3	chr11	+	1707	7	FSM	ENSMUSG00000034175.14	ENSMUST00000129016.3	1707	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	70.035110242411	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTCCTGAGTGTCAG	NA	False	NA	18	True	AATAAA	-19	NA	5050236	5056093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055180_5055348_5055432_5055718_5055799
ENSMUST00000129021.9	chr4	-	1378	8	FSM	ENSMUSG00000028411.16	ENSMUST00000129021.9	1378	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	41.4453168128111	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGGATTGTGTAGTAT	21	False	NA	-8	True	AATATA	-17	NA	40703187	40686241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695419_40697216_40697354_40703136
ENSMUST00000129162.3	chr11	+	1828	2	FSM	ENSMUSG00000048497.12	ENSMUST00000129162.3	1828	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGTCTGTGTCTGGTT	NA	False	NA	2	True	NA	NA	NA	62540274	62557180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_62540418_62555495
ENSMUST00000129191.8	chr10	-	2011	4	FSM	ENSMUSG00000087177.8	ENSMUST00000129191.8	2011	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.35702260395516	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTTTTTTCAGCATAT	5657	False	NA	1	True	AATAAA	-18	NA	39608003	39497407	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_39498724_39498898_39499088_39516271_39516508_39607733
ENSMUST00000129239.2	chrX	+	747	4	FSM	ENSMUSG00000002014.13	ENSMUST00000129239.2	747	4	0	0	0	0	multi-exon	FALSE	canonical	3	1491	junction_3	71.4438396380137	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGCTCCTGTGTCTATGG	7248	False	NA	52	True	AATAAA	-34	NA	72832449	72834436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72832560_72833405_72833481_72833636_72833727_72833964
ENSMUST00000129245.8	chr12	+	1498	3	FSM	ENSMUSG00000021268.18	ENSMUST00000129245.8	1498	3	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	159.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109506883	109511202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_109506983_109509582_109509689_109509909
ENSMUST00000129254.8	chr1	-	1365	10	FSM	ENSMUSG00000026155.14	ENSMUST00000129254.8	1365	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	137.166115385238	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTGTTGGTCTGTGCTGA	NA	False	NA	NA	False	NA	NA	NA	23948770	23885376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_23885645_23887344_23887653_23888383_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23948743
ENSMUST00000129256.2	chr11	-	650	2	FSM	ENSMUSG00000017288.16	ENSMUST00000129256.2	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTTATGTGTGTATG	NA	False	NA	-9	True	AATAAA	-16	NA	76070464	76067784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_76068209_76070238
ENSMUST00000129269.8	chr9	+	6186	34	FSM	ENSMUSG00000037286.16	ENSMUST00000129269.8	6186	34	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_9	35.0771941586826	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTTATCCTGTTGC	NA	False	NA	15	True	AATAAA	-15	NA	100525500	100840598	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ENSMUST00000129270.8	chr16	-	816	6	FSM	ENSMUSG00000003528.16	ENSMUST00000129270.8	816	6	0	0	0	0	multi-exon	FALSE	canonical	3	1746	junction_4	78.4973884915925	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTCTGTATATCCCAT	NA	False	NA	NA	False	NA	NA	NA	17745207	17743545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017
ENSMUST00000129285.8	chr3	+	2818	7	FSM	ENSMUSG00000028019.10	ENSMUST00000129285.8	2818	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	32.8705372974374	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAAGTGTTCGTCTAAGT	NA	False	NA	40	True	AATAAA	-25	NA	80944478	81121341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_80944862_81038324_81038384_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
ENSMUST00000129308.9	chr3	-	2892	8	FSM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_7	45.7504321380282	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAATGAGGGCATGTGTG	3744	False	NA	0	True	AATAAA	-35	NA	89319170	89309275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319090
ENSMUST00000129311.2	chr8	+	1969	3	FSM	ENSMUSG00000000740.13	ENSMUST00000129311.2	1969	3	0	0	0	0	multi-exon	FALSE	canonical	3	21322	junction_2	2171	3452	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTTTCTTTGTCTTTT	NA	False	NA	17	True	AATAAA	-18	NA	123829391	123831983	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_123829502_123829583_123830096_123830636
ENSMUST00000129364.2	chr2	+	1127	2	FSM	ENSMUSG00000085436.2	ENSMUST00000129364.2	1127	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTTTTTTGGATACGGT	7240	False	NA	NA	False	NA	NA	NA	164753273	164761873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_164753671_164761143
ENSMUST00000129451.2	chr17	-	834	3	FSM	ENSMUSG00000040048.15	ENSMUST00000129451.2	834	3	0	0	0	0	multi-exon	FALSE	canonical	3	2248	junction_2	20.5	7708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTCTGGTGACTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	24943394	24941033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24941495_24941628_24941768_24943160
ENSMUST00000129479.2	chrX	-	747	3	FSM	ENSMUSG00000085757.8	ENSMUST00000129479.2	747	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	17.5	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATATGAGTTGATTT	NA	False	NA	NA	False	AATAAA	-25	NA	61570617	61554144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_61554605_61558040_61558144_61570433
ENSMUST00000129489.8	chr2	-	2316	15	FSM	ENSMUSG00000026767.13	ENSMUST00000129489.8	2316	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	43.9893887946924	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCACTTTTACATTTG	NA	False	NA	-22	True	AATAAA	-19	NA	12424255	12352073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408978_12410670_12410732_12414811_12414892_12423969
ENSMUST00000129529.9	chr2	-	1157	7	FSM	ENSMUSG00000027566.16	ENSMUST00000129529.9	1157	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1848.62763662369	12057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	False	NA	-12	True	AATAAA	-17	NA	179684203	179678166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_179678633_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ENSMUST00000129552.2	chr7	+	2827	9	FSM	ENSMUSG00000030965.20	ENSMUST00000129552.2	2827	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	67.4532245337464	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATACGATATTTTAGTGTC	NA	False	NA	13	True	AATAAA	-15	NA	132460977	132486837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478364_132478447_132480257_132480343_132482495_132482611_132484763
ENSMUST00000129557.2	chr11	-	1372	10	FSM	ENSMUSG00000018160.16	ENSMUST00000129557.2	1372	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	68.4675285747617	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGACTTTGCATATTT	NA	False	NA	NA	False	AATAAA	-15	NA	98084102	98060736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_98061267_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ENSMUST00000129570.3	chr11	-	1631	2	FSM	ENSMUSG00000085156.9	ENSMUST00000129570.3	1631	2	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_1	0	2206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGTTGATCGGGTTTG	NA	False	NA	-2	True	NA	NA	NA	6477759	6475591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6475818_6476354
ENSMUST00000129580.2	chr17	+	637	3	FSM	ENSMUSG00000044533.16	ENSMUST00000129580.2	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	10975	junction_2	36.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTACCACATAAGGGT	6950	False	NA	-58	True	NA	NA	NA	24939796	24940841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24940277_24940596_24940689_24940776
ENSMUST00000129595.8	chr8	+	1920	12	FSM	ENSMUSG00000003808.19	ENSMUST00000129595.8	1920	12	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_4	51.0548238790647	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583623	85595885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594548_85594637_85594716_85594852_85594968_85595494
ENSMUST00000129656.2	chr6	+	710	2	FSM	ENSMUSG00000030037.10	ENSMUST00000129656.2	710	2	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_1	0	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	7463	False	NA	NA	False	ATTAAA	-19	NA	83086100	83086920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83086185_83086294
ENSMUST00000129673.8	chr2	+	834	3	FSM	ENSMUSG00000062647.17	ENSMUST00000129673.8	834	3	0	0	0	0	multi-exon	FALSE	canonical	3	4686	junction_2	409.5	3943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGGTTATTTGGGT	NA	False	NA	6	True	AATATA	-19	NA	26802203	26803330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_26802814_26802999_26803070_26803176
ENSMUST00000129713.2	chr2	-	1309	2	FSM	ENSMUSG00000087648.2	ENSMUST00000129713.2	1309	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATTAGCTACTTTATT	7129	False	NA	-4	True	NA	NA	NA	167996433	167994522	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_167995672_167996273
ENSMUST00000129718.2	chr4	+	717	3	FSM	ENSMUSG00000028676.18	ENSMUST00000129718.2	717	3	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_2	671.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTTTTATTTTATTTT	4706	False	NA	NA	False	NA	NA	NA	135583442	135586542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_135583603_135585615_135585783_135586152
ENSMUST00000129805.2	chr3	-	675	3	FSM	ENSMUSG00000028179.13	ENSMUST00000129805.2	675	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	531.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTGGTTTTTTTTTGA	NA	False	NA	-18	True	ATTAAA	-19	NA	157603349	157600059	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_157600465_157602828_157602968_157603218
ENSMUST00000129826.2	chr8	+	659	2	FSM	ENSMUSG00000060038.15	ENSMUST00000129826.2	659	2	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTAGTCTTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	85798434	85799491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85798683_85799080
ENSMUST00000129847.8	chr7	+	593	7	FSM	ENSMUSG00000040952.17	ENSMUST00000129847.8	593	7	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_3	8759.20174096298	85277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24585531_24585613_24587706_24587891_24588331_24588387_24589165
ENSMUST00000129888.2	chr7	+	478	2	FSM	ENSMUSG00000030432.13	ENSMUST00000129888.2	478	2	0	0	0	0	multi-exon	FALSE	canonical	3	6649	junction_1	0	2224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	3669	False	NA	17	True	AATAAA	-32	NA	4796848	4797561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_4797182_4797416
ENSMUST00000129917.8	chr17	-	1790	5	FSM	ENSMUSG00000061046.10	ENSMUST00000129917.8	1790	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	4.7169905660283	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGCAGGTCTGTTTAT	4591	False	NA	-2	True	NA	NA	NA	26004309	26001763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26002557_26002758_26002861_26003048_26003547_26003634_26003700_26003977
ENSMUST00000129935.8	chr17	+	949	6	FSM	ENSMUSG00000037805.16	ENSMUST00000129935.8	949	6	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_3	2914.49848859113	6238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547557	28550006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_28547593_28547784_28547860_28547940_28548255_28548347_28548497_28549498_28549672_28549803
ENSMUST00000129947.9	chrX	-	1319	8	FSM	ENSMUSG00000031167.17	ENSMUST00000129947.9	1319	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	511.677353696364	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGTGAATGTCATTTT	6562	False	NA	NA	False	ATTAAA	-38	NA	8011935	8008710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8009195_8009485_8009572_8009896_8009991_8010086_8010187_8010413_8010685_8010811_8010919_8011193_8011312_8011876
ENSMUST00000129956.2	chr12	+	4314	17	FSM	ENSMUSG00000035597.20	ENSMUST00000129956.2	4314	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	158.410069124409	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCTGTGGTCTCCTTC	7540	False	NA	8	True	AATAAA	-16	NA	65083139	65110160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103078_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ENSMUST00000129984.2	chr17	+	965	2	FSM	ENSMUSG00000044533.16	ENSMUST00000129984.2	965	2	0	0	0	0	multi-exon	FALSE	canonical	3	8303	junction_1	0	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTCACAATTAACTGTGG	6389	False	NA	NA	False	NA	NA	NA	24939235	24940281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24939427_24939507
ENSMUST00000130028.2	chr16	+	1960	8	FSM	ENSMUSG00000022827.15	ENSMUST00000130028.2	1960	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	38.0767216904748	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACAGTGTCATTTCTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	37360261	37392744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_37360323_37362208_37362301_37377182_37377313_37380356_37380472_37384030_37384129_37387681_37387754_37390749_37390789_37391391
ENSMUST00000130081.8	chr7	-	2336	15	FSM	ENSMUSG00000038520.16	ENSMUST00000130081.8	2336	15	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_3	25.9332935487515	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGCTGGCTGGCATCAG	7888	False	NA	-11	True	AATAAA	-14	NA	44498314	44490456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44490845_44490966_44491054_44491406_44491725_44492044_44492145_44492239_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ENSMUST00000130090.8	chr4	+	823	5	FSM	ENSMUSG00000028884.15	ENSMUST00000130090.8	823	5	0	0	0	0	multi-exon	FALSE	canonical	3	1348	junction_4	96.0676844729798	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAATAATAAA	NA	False	NA	NA	False	NA	NA	NA	132495686	132501546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137
ENSMUST00000130098.8	chr8	+	1881	4	FSM	ENSMUSG00000074247.11	ENSMUST00000130098.8	1881	4	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_2	319.275568888208	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTGTGTATTTTTCTG	NA	False	NA	13	True	NA	NA	NA	71921842	71928742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71921970_71924680_71924762_71926418_71926481_71927131
ENSMUST00000130128.2	chr4	-	512	2	FSM	ENSMUSG00000028234.7	ENSMUST00000130128.2	512	2	0	0	0	0	multi-exon	FALSE	canonical	3	8316	junction_1	0	7965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	365	False	NA	-37	True	AATAAA	-18	NA	3835233	3834469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_3834684_3834935
ENSMUST00000130174.2	chr11	-	583	5	FSM	ENSMUSG00000020419.12	ENSMUST00000130174.2	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_4	8.69985632065266	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAATTAAAGACTCATCT	NA	False	NA	NA	False	NA	NA	NA	4391105	4374247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ENSMUST00000130201.8	chr1	-	1894	5	FSM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	911.97762445139	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAAAACTCTCCCTCTTC	1649	False	NA	NA	False	AATAAA	-22	NA	4855933	4843428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_4844740_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ENSMUST00000130216.3	chr17	+	2618	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	25441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGAGTATATTTTTATC	NA	False	NA	18	True	ATTAAA	-20	NA	29251601	29262347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ENSMUST00000130219.2	chr4	+	805	3	FSM	ENSMUSG00000028729.16	ENSMUST00000130219.2	805	3	0	0	0	0	multi-exon	FALSE	canonical	3	2481	junction_2	26.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGTTGGTGTGTCTGTC	NA	False	NA	NA	False	AATAAA	-40	NA	118478044	118479128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_118478195_118478278_118478363_118478557
ENSMUST00000130269.2	chr11	+	2096	11	FSM	ENSMUSG00000018932.10	ENSMUST00000130269.2	2096	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	128.562980674843	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGTGTGAGACTGACTGT	NA	False	NA	NA	False	NA	NA	NA	60822891	60843620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ENSMUST00000130367.8	chr17	+	3187	10	FSM	ENSMUSG00000024457.17	ENSMUST00000130367.8	3187	10	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	52.5084355362939	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	31	True	AATAAA	-38	NA	37148034	37170290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37165194_37167093_37167117_37167547_37167664_37167880_37167914_37168291
ENSMUST00000130368.8	chr9	-	1162	11	FSM	ENSMUSG00000061559.16	ENSMUST00000130368.8	1162	11	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_9	343.30050975785	2866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTGTGAACGTGCT	5443	False	NA	-3	True	AATAAA	-19	NA	54641781	54624442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637941_54638670_54638722_54641758
ENSMUST00000130392.8	chr11	-	1540	3	FSM	ENSMUSG00000087060.8	ENSMUST00000130392.8	1540	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTGTATCGTTTATTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16901099	16885153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_16886565_16900881_16900931_16901019
ENSMUST00000130425.8	chr6	+	638	4	FSM	ENSMUSG00000042389.14	ENSMUST00000130425.8	638	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	54.9201440477192	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTCTCCCAGCCTTGCT	NA	False	NA	NA	False	TATAAA	-23	NA	115521624	115531233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951
ENSMUST00000130458.8	chr8	-	2291	4	FSM	ENSMUSG00000092260.8	ENSMUST00000130458.8	2291	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	1.24721912892465	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATTTGGAAAAGGTATCA	9672	False	NA	NA	False	AATAAA	-16	NA	70202612	70194288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70196261_70196841_70196903_70197110_70197238_70202481
ENSMUST00000130469.8	chr19	-	1979	15	FSM	ENSMUSG00000024830.18	ENSMUST00000130469.8	1979	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	32.5877935079116	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	2803	False	NA	-2	True	AGTAAA	-14	NA	4213299	4206793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4209564_4209705_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
ENSMUST00000130522.8	chr11	+	621	6	FSM	ENSMUSG00000020407.14	ENSMUST00000130522.8	621	6	0	0	0	0	multi-exon	FALSE	canonical	3	2502	junction_1	103.683364142952	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCATTGGCACTTCAGGCG	NA	False	NA	NA	False	NA	NA	NA	9068547	9083322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233
ENSMUST00000130611.2	chr2	+	318	2	FSM	ENSMUSG00000045106.13	ENSMUST00000130611.2	318	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCTTCCTTAATGATT	NA	False	NA	NA	False	NA	NA	NA	104847465	104848249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_104847549_104848014
ENSMUST00000130621.2	chr11	-	886	4	FSM	ENSMUSG00000004394.13	ENSMUST00000130621.2	886	4	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_2	40.4337592722825	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTAGGGGTCTCGCC	5338	False	NA	NA	False	NA	NA	NA	6224870	6221660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397
ENSMUST00000130643.9	chr17	-	4653	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTCCACAAGTTTGGT	NA	False	NA	-11	True	AATAAA	-20	NA	28841683	28806621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ENSMUST00000130645.8	chr3	+	2953	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_1	130.277568667669	2209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTGTATATTTATCTC	NA	False	NA	50	True	AATAAA	-36	NA	19242273	19274981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ENSMUST00000130659.8	chr4	+	574	3	FSM	ENSMUSG00000085334.8	ENSMUST00000130659.8	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	16	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTGTTCAAGTAGGA	NA	False	NA	18	True	AATAAA	-19	NA	126929242	126930806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_126929648_126930355_126930443_126930724
ENSMUST00000130666.2	chr11	-	598	4	FSM	ENSMUSG00000017176.18	ENSMUST00000130666.2	598	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	238.736023441978	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGGTTTATTTTTATTA	NA	False	NA	NA	False	AGTAAA	-17	NA	100331753	100330378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100330761_100330865_100330913_100331010_100331081_100331654
ENSMUST00000130671.8	chr16	+	4945	31	FSM	ENSMUSG00000023088.18	ENSMUST00000130671.8	4945	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	39.9774380814423	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCAGCCACGTCTACG	7156	False	NA	NA	False	NA	NA	NA	14179421	14291766	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255602_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266457_14275751_14275834_14276887_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ENSMUST00000130731.2	chr3	-	705	2	FSM	ENSMUSG00000074653.11	ENSMUST00000130731.2	705	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAACTGCCTTCAGTTTG	NA	False	NA	-7	True	AGTAAA	-20	NA	30753959	30752270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_30752864_30753847
ENSMUST00000130818.8	chr16	-	938	5	FSM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_4	876.141113063415	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTTTATATACAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	55850039	55837361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55845001_55849965
ENSMUST00000130855.8	chr10	-	1925	6	FSM	ENSMUSG00000040415.16	ENSMUST00000130855.8	1925	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	50.9643012313521	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	False	NA	0	True	AATAAA	-25	NA	127031578	127026246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_127026909_127027204_127027423_127028477_127029208_127029598_127029673_127030278_127030504_127031562
ENSMUST00000130880.9	chrX	+	1389	5	FSM	ENSMUSG00000040621.15	ENSMUST00000130880.9	1389	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	17.0293863659264	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTAAGCCACGTGTCATT	NA	False	NA	NA	False	CATAAA	-2	NA	164953449	164972800	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_164953547_164959840_164960076_164961787_164961827_164963348_164963806_164972239
ENSMUST00000130881.8	chr2	-	1724	12	FSM	ENSMUSG00000027610.18	ENSMUST00000130881.8	1724	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_11	301.306960254025	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAATGACTCATTGTT	8446	False	NA	-10	True	AATAAA	-11	NA	155434634	155405108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155434613
ENSMUST00000130885.8	chr16	+	721	6	FSM	ENSMUSG00000022711.17	ENSMUST00000130885.8	721	6	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	21.3953265925061	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGGGAATCACGAACGA	NA	False	NA	NA	False	AATAAA	-17	NA	8455586	8466979	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745
ENSMUST00000130891.3	chr13	-	1103	4	FSM	ENSMUSG00000071281.13	ENSMUST00000130891.3	1103	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	3.85861230093008	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCATTCATACAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	67872445	67856307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67872306
ENSMUST00000130911.8	chr10	-	2554	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	1998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCCTTGCGTGTGGGT	NA	False	NA	-4	True	AATAAA	-43	NA	82599978	82584534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ENSMUST00000130942.8	chr4	+	1319	10	FSM	ENSMUSG00000028601.19	ENSMUST00000130942.8	1319	10	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	222.335582197522	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCACCTTGGCTAGTGA	NA	False	NA	NA	False	NA	NA	NA	108022662	108036268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_108022859_108026911_108026980_108027057_108027424_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ENSMUST00000130946.8	chr17	-	634	5	FSM	ENSMUSG00000059208.16	ENSMUST00000130946.8	634	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	833.202256357963	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	NA	False	NA	-8	True	AATAAA	-13	NA	33879224	33865212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33865634_33867786_33867839_33877361_33877440_33877843_33877889_33879186
ENSMUST00000130990.2	chr12	-	2522	2	FSM	ENSMUSG00000037169.16	ENSMUST00000130990.2	2522	2	0	0	0	0	multi-exon	FALSE	canonical	3	927	junction_1	0	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCGATGTTTTCCTTCC	NA	False	NA	-21	True	AATAAA	-17	NA	12990617	12986096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_12987612_12989610
ENSMUST00000130994.8	chr3	+	4286	9	FSM	ENSMUSG00000000561.15	ENSMUST00000130994.8	4286	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	323.092067954322	2386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAAAGGGACTTCATG	NA	False	NA	NA	False	NA	NA	NA	105866829	105877353	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_105867004_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873742_105874478
ENSMUST00000131011.2	chr13	-	540	3	FSM	ENSMUSG00000017778.15	ENSMUST00000131011.2	540	3	0	0	0	0	multi-exon	FALSE	canonical	3	10515	junction_1	2196	91729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGCCTCGTCTCTGCA	NA	False	NA	-14	True	AATAAA	-16	NA	86195023	86192934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_86193028_86193845_86193989_86194719
ENSMUST00000131052.8	chr4	-	835	6	FSM	ENSMUSG00000028741.14	ENSMUST00000131052.8	835	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	422.625318692574	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTTGTTGTTT	8669	False	NA	-2	True	AATAAA	-44	NA	139076914	139074745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076829
ENSMUST00000131070.3	chr19	-	5059	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	0	0	0	0	multi-exon	TRUE	canonical	3	707	junction_13	63.1947496940125	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340010	37246141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ENSMUST00000131078.8	chr9	+	1199	6	FSM	ENSMUSG00000033543.18	ENSMUST00000131078.8	1199	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	384.735441569918	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919835	69930020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_69919944_69922573_69922693_69923049_69923220_69924100_69924474_69926670_69926798_69929718
ENSMUST00000131139.3	chr5	+	171	1	FSM	ENSMUSG00000059064.9	ENSMUST00000131139.3	171	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1425	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACCTTGAATGGATTCGA	NA	False	NA	NA	False	NA	NA	NA	33916709	33916880	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_33916700_33916900
ENSMUST00000131170.2	chr11	+	778	6	FSM	ENSMUSG00000078652.10	ENSMUST00000131170.2	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	1173	junction_1	158.018226796784	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTAATTTCTGGAGAAC	NA	False	NA	96	True	NA	NA	NA	101210659	101212925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUST00000131184.8	chr15	+	1819	7	FSM	ENSMUSG00000023051.12	ENSMUST00000131184.8	1819	7	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_2	131.824904913888	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102426626	102432109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102427038_102427556_102427727_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
ENSMUST00000131206.8	chr16	+	1405	7	FSM	ENSMUSG00000025616.15	ENSMUST00000131206.8	1405	7	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_5	32.3045404445464	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGTCTCTACCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	87251930	87267912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241
ENSMUST00000131208.2	chr7	-	575	2	FSM	ENSMUSG00000000486.14	ENSMUST00000131208.2	575	2	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGGAGTCTTC	NA	False	NA	-7	True	AATAAA	-18	NA	126814297	126813618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126814017_126814120
ENSMUST00000131231.2	chr4	-	654	5	FSM	ENSMUSG00000038816.15	ENSMUST00000131231.2	654	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	112.62548557054	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACACTGTGCTCAGGG	NA	False	NA	NA	False	NA	NA	NA	56814319	56812139	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56814169
ENSMUST00000131237.8	chr8	+	2689	4	FSM	ENSMUSG00000052446.18	ENSMUST00000131237.8	2689	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	166.477893093614	1245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704881	72724177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_72704948_72719637_72719765_72719943_72720005_72721742
ENSMUST00000131256.8	chr6	-	961	10	FSM	ENSMUSG00000025607.16	ENSMUST00000131256.8	961	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	71.4927260393896	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGATTCTAAGTAACACA	NA	False	NA	NA	False	AATAAA	-14	NA	30873665	30835361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_30835553_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ENSMUST00000131264.8	chr5	+	3732	17	FSM	ENSMUSG00000029267.18	ENSMUST00000131264.8	3732	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	753.559387175291	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTAGCTCTTCATTT	NA	False	NA	103	True	AGTAAA	-13	NA	108213581	108256135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108213832_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ENSMUST00000131291.8	chr5	+	2355	17	FSM	ENSMUSG00000029267.18	ENSMUST00000131291.8	2355	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	685.769446953566	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAGAGACTTAATTTTT	NA	False	NA	-78	True	CATAAA	-22	NA	108213539	108255029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108213832_108221172_108221321_108228690_108228708_108228787_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUST00000131303.8	chr16	+	532	4	FSM	ENSMUSG00000075704.18	ENSMUST00000131303.8	532	4	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	7.03957069398096	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCCCTGACTGTCTCT	NA	False	NA	12	True	NA	NA	NA	18245211	18256562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251
ENSMUST00000131327.8	chr19	-	2350	13	FSM	ENSMUSG00000001750.17	ENSMUST00000131327.8	2350	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_10	8.99498316964641	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTCCTCTCTG	NA	False	NA	0	True	AATAAA	-20	NA	3953072	3946049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948876_3948979_3949120_3951890_3952557_3952630_3952725_3952881_3952965_3953045
ENSMUST00000131332.8	chrX	+	1740	16	FSM	ENSMUSG00000025287.16	ENSMUST00000131332.8	1740	16	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	338.793873747577	2108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACGATTGTGAGTCTCC	NA	False	NA	18	True	AATAAA	-12	NA	154045500	154080642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_154045671_154047031_154047090_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ENSMUST00000131351.8	chr9	-	3316	6	FSM	ENSMUSG00000059820.15	ENSMUST00000131351.8	3316	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	32.2800247831379	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTGTTACTTTTTAA	NA	False	NA	-3	True	AATAAA	-17	NA	50528764	50516539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50528527
ENSMUST00000131365.2	chr2	-	629	2	FSM	ENSMUSG00000087547.2	ENSMUST00000131365.2	629	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACATCTGGCCAAATATG	8707	False	NA	-13	True	NA	NA	NA	157439240	157437502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_157437906_157439014
ENSMUST00000131384.3	chr7	-	1974	8	FSM	ENSMUSG00000053801.19	ENSMUST00000131384.3	1974	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	174.077744770806	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCTGAGCTTCTTTGCT	8479	False	NA	0	True	AATAAA	-35	NA	45480368	45474646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45479715_45479834_45480018_45480214_45480296
ENSMUST00000131412.8	chr1	+	2160	21	FSM	ENSMUSG00000062590.14	ENSMUST00000131412.8	2160	21	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_14	12.2982722363753	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATTCTCTTTATTGT	NA	False	NA	8	True	AATAAA	-13	NA	86082536	86180211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998
ENSMUST00000131457.2	chr2	+	566	3	FSM	ENSMUSG00000087283.2	ENSMUST00000131457.2	566	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	3	683	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTGGTATACCCTTAT	9346	False	NA	NA	False	NA	NA	NA	60241868	60242923	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_60242062_60242190_60242353_60242712
ENSMUST00000131520.8	chr4	+	4360	6	FSM	ENSMUSG00000038827.12	ENSMUST00000131520.8	4360	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	52.8189359983709	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTTTCTGTGTACGTT	3	True	NA	13	True	AATAAA	-22	NA	56802351	56809601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_56802727_56803507_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
ENSMUST00000131613.8	chr4	-	1768	7	FSM	ENSMUSG00000046671.19	ENSMUST00000131613.8	1768	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	251.062409239881	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGAATTTTTTTCTTG	NA	False	NA	-7	True	ATTAAA	-16	NA	134262609	134252874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_134253824_134256399_134256613_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262556
ENSMUST00000131616.8	chr8	-	876	4	FSM	ENSMUSG00000014633.16	ENSMUST00000131616.8	876	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	157.584545209512	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	117648161	117616017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_117616599_117620826_117620899_117637822_117637974_117648089
ENSMUST00000131671.8	chr4	+	2543	10	FSM	ENSMUSG00000066037.15	ENSMUST00000131671.8	2543	10	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	97.5394823509124	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038252	136067992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUST00000131676.8	chr2	+	1272	3	FSM	ENSMUSG00000078898.10	ENSMUST00000131676.8	1272	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	13	630	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTGTTCCCATTTCATG	NA	False	NA	NA	False	NA	NA	NA	175214228	175223579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_175214367_175222239_175222367_175222572
ENSMUST00000131687.2	chr11	+	612	4	FSM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	12.3917535302941	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	29	True	AATATA	-14	NA	97489336	97513719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_97489494_97505749_97505855_97509262_97509326_97513432
ENSMUST00000131728.4	chr10	-	2483	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	0	0	0	0	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	17959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTTGTGTGTTCTCTT	8692	False	NA	-7	True	AATAAA	-12	NA	128401856	128393636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ENSMUST00000131743.8	chr10	-	1238	5	FSM	ENSMUSG00000004667.19	ENSMUST00000131743.8	1238	5	0	0	0	0	multi-exon	FALSE	canonical	3	2815	junction_1	73.6562964043129	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGGTGCAATCCTAGA	5660	False	NA	-21	True	ATTAAA	-17	NA	79875484	79871784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_79872136_79872360_79872808_79873021_79873219_79874272_79874448_79875416
ENSMUST00000131751.7	chr1	-	3583	22	FSM	ENSMUSG00000007097.15	ENSMUST00000131751.7	3583	22	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_18	23.2329229216428	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTCCACAGGTCCCGC	NA	False	NA	-14	True	AATAAA	-18	NA	172125631	172102109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ENSMUST00000131787.2	chr11	-	462	5	Antisense	novelGene_ENSMUSG00000077457.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29415	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACGGCGCGTGAGCGCC	NA	False	NA	NA	False	NA	NA	NA	62495633	62493702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr11_-_62493850_62494060_62494109_62494422_62494473_62495228_62495293_62495480
ENSMUST00000131788.9	chr1	+	3426	10	FSM	ENSMUSG00000026199.18	ENSMUST00000131788.9	3426	10	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_4	19.8891992526994	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	44	False	NA	19	True	AATAAA	-15	NA	75168803	75176031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75172357_75172444_75173026_75173157_75173314_75174287_75175021_75175120_75175289_75175423_75175510_75175707
ENSMUST00000131815.8	chr11	-	853	4	FSM	ENSMUSG00000000384.16	ENSMUST00000131815.8	853	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	235.927013195936	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGAGATAAGGCCTATTT	NA	False	NA	-12	True	AATAAA	-6	NA	6576022	6573199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6573462_6573815_6574284_6575148_6575214_6575964
ENSMUST00000131820.2	chr17	-	369	2	FSM	ENSMUSG00000034868.10	ENSMUST00000131820.2	369	2	0	0	0	0	multi-exon	FALSE	canonical	3	1981	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGCGGTGGGGCCCCAA	3404	False	NA	NA	False	NA	NA	NA	71297525	71283930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_71284242_71297467
ENSMUST00000131870.2	chr2	+	724	3	FSM	ENSMUSG00000027245.12	ENSMUST00000131870.2	724	3	0	0	0	0	multi-exon	FALSE	canonical	3	4570	junction_2	83	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTTTTTTTTCTTCAG	NA	False	NA	20	True	AATAAA	-15	NA	121287604	121288787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121287773_121288126_121288525_121288629
ENSMUST00000131871.8	chr16	+	1737	10	FSM	ENSMUSG00000022884.17	ENSMUST00000131871.8	1737	10	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	631.938131836603	2246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6073	False	NA	NA	False	AATAAA	-18	NA	22926527	22932697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ENSMUST00000131874.2	chr10	-	405	2	FSM	ENSMUSG00000085662.2	ENSMUST00000131874.2	405	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTAACACCTTGGAATG	7593	False	NA	NA	False	NA	NA	NA	75829826	75828524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_75828750_75829646
ENSMUST00000131939.6	chr6	-	1902	4	FSM	ENSMUSG00000030035.15	ENSMUST00000131939.6	1902	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	19.1369334592098	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098540	83096025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83096702_83096848_83097026_83097165_83097858_83098183
ENSMUST00000131940.8	chr2	-	1273	6	FSM	ENSMUSG00000026922.14	ENSMUST00000131940.8	1273	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	210.357219985433	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTAGAGTTCTTTCTCC	9602	False	NA	1	True	TATAAA	-45	NA	26494223	26483068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494135
ENSMUST00000131990.2	chr16	-	3283	5	FSM	ENSMUSG00000022814.7	ENSMUST00000131990.2	3283	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	482.354123025812	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAACATCCTCTGTAG	8675	False	NA	NA	False	NA	NA	NA	33787373	33775163	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33787195
ENSMUST00000132034.5	chr5	-	576	2	FSM	ENSMUSG00000038803.8	ENSMUST00000132034.5	576	2	0	0	0	0	multi-exon	FALSE	canonical	3	1088	junction_1	0	3276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTTGTGGTCCCAAA	NA	False	NA	-5	True	NA	NA	NA	31065069	31063861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31064111_31064742
ENSMUST00000132091.8	chr7	+	4492	35	FSM	ENSMUSG00000039187.17	ENSMUST00000132091.8	4492	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	69.8764604368552	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042100	79100012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098929_79099387
ENSMUST00000132093.8	chr11	-	967	4	FSM	ENSMUSG00000032892.15	ENSMUST00000132093.8	967	4	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_1	54.6036221834738	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCCTTCAAATCTA	7290	False	NA	-2	True	AATAAA	-22	NA	68864615	68863309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_68863855_68863942_68864100_68864266_68864384_68864467
ENSMUST00000132102.2	chr5	+	1426	8	FSM	ENSMUSG00000016503.19	ENSMUST00000132102.2	1426	8	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_2	50.1141553997328	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCGACTCTTTGCTGTT	NA	False	NA	15	True	ATTAAA	-15	NA	146885514	146892416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933
ENSMUST00000132121.8	chr12	+	1147	7	FSM	ENSMUSG00000056899.11	ENSMUST00000132121.8	1147	7	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	24.8310960960916	674	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTGTTTGGGTGTTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	41074088	42002371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_41074145_41074559_41074633_41118308_41118446_41160838_41160943_41675546_41675613_41750437_41750541_42001763
ENSMUST00000132158.8	chr1	+	2752	8	FSM	ENSMUSG00000026696.16	ENSMUST00000132158.8	2752	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	107.103040220574	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACTGTGGCTTGTTCAG	NA	False	NA	73	True	AATAAA	-24	NA	162398083	162426653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162424617
ENSMUST00000132168.2	chr11	+	493	3	FSM	ENSMUSG00000018882.13	ENSMUST00000132168.2	493	3	0	0	0	0	multi-exon	FALSE	canonical	3	2928	junction_1	123	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATATCATATTGATTTT	NA	False	NA	NA	False	NA	NA	NA	97206733	97212551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_97206766_97207572_97207751_97212268
ENSMUST00000132185.2	chr11	+	726	4	FSM	ENSMUSG00000020691.14	ENSMUST00000132185.2	726	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	122.068286899861	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTGTCCTGTAAGACA	NA	False	NA	NA	False	NA	NA	NA	105023274	105029807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_105023407_105026163_105026271_105028544_105028611_105029386
ENSMUST00000132186.8	chr2	+	1563	11	FSM	ENSMUSG00000068882.14	ENSMUST00000132186.8	1563	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	541.933722885004	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATAGTTCTTTCTTCTT	NA	False	NA	14	True	TATAAA	-5	NA	69691966	69701854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ENSMUST00000132193.8	chr7	+	1112	6	FSM	ENSMUSG00000042831.14	ENSMUST00000132193.8	1112	6	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_1	28.3125413906982	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTGGATTTTTTTT	NA	False	NA	8	True	AATAAA	-15	NA	30008212	30013728	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30012133_30013343
ENSMUST00000132233.2	chr13	-	709	2	FSM	ENSMUSG00000017778.15	ENSMUST00000132233.2	709	2	0	0	0	0	multi-exon	FALSE	canonical	3	10515	junction_1	0	4504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTCAATGCCTCGTCT	NA	False	NA	-19	True	AATAAA	-11	NA	86194466	86192939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_86193028_86193845
ENSMUST00000132270.8	chr2	-	1892	10	FSM	ENSMUSG00000017664.17	ENSMUST00000132270.8	1892	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	86.0462121030551	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5705	False	NA	-34	True	AATAAA	-18	NA	165129744	165118473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124783_165125168_165125524_165129703
ENSMUST00000132316.8	chr16	+	2105	8	FSM	ENSMUSG00000022678.17	ENSMUST00000132316.8	2105	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	103.03773828168	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAAAAGTGTTTTGTG	NA	False	NA	86	True	AATAAA	-8	NA	13981161	14010782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ENSMUST00000132318.2	chr5	-	488	4	FSM	ENSMUSG00000037007.18	ENSMUST00000132318.2	488	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.05536398239638	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGGAAGGCAGTTATGT	1751	False	NA	NA	False	AATAAA	-34	NA	138153966	138149188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_138149385_138149466_138149559_138151106_138151232_138153891
ENSMUST00000132392.2	chr2	+	596	3	FSM	ENSMUSG00000059005.14	ENSMUST00000132392.2	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	3912	junction_1	3823	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCAGAGTGGGAAAAAGAG	7494	False	NA	NA	False	NA	NA	NA	75489623	75492377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_75489734_75491809_75491933_75492014
ENSMUST00000132404.8	chr5	+	3122	9	FSM	ENSMUSG00000075703.17	ENSMUST00000132404.8	3122	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	22.1288838399048	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTTGTCACTGTTGA	NA	False	NA	3	True	AGTAAA	-14	NA	30437671	30473971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30461075_30461339_30462709_30462760_30468068_30468118_30469272_30469454_30470335_30470522_30471898
ENSMUST00000132417.8	chr4	+	2795	6	FSM	ENSMUSG00000028608.16	ENSMUST00000132417.8	2795	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	262.709725743072	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	14	True	AATAAA	-19	NA	107747094	107754315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_107747400_107748661_107748719_107749156_107749234_107749418_107749451_107750530_107750609_107752069
ENSMUST00000132433.2	chr11	-	1054	2	FSM	ENSMUSG00000051232.14	ENSMUST00000132433.2	1054	2	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTCCAGAGCTTATAT	4985	False	NA	NA	False	NA	NA	NA	78399644	78398077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_78398632_78399144
ENSMUST00000132445.8	chr3	-	1086	5	FSM	ENSMUSG00000027953.14	ENSMUST00000132445.8	1086	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	12.4373429638327	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	-31	True	AATAAA	-17	NA	89177830	89175552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177447_89177692
ENSMUST00000132571.2	chr18	-	418	3	FSM	ENSMUSG00000086287.2	ENSMUST00000132571.2	418	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATGGCTTTATTAATG	NA	False	NA	NA	False	ATTAAA	-17	NA	23885362	23883503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_23883617_23884636_23884881_23885301
ENSMUST00000132582.2	chr7	-	401	2	FSM	ENSMUSG00000025466.20	ENSMUST00000132582.2	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCTTGTGGTGAGTT	3944	False	NA	-2	True	NA	NA	NA	139679881	139679384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_139679620_139679715
ENSMUST00000132584.8	chr11	+	695	6	FSM	ENSMUSG00000086003.8	ENSMUST00000132584.8	695	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	57.6520598070876	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTTTACCTGCTTGTA	NA	False	NA	15	True	AATAAA	-22	NA	94024310	94046602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_94024382_94029312_94029490_94040661_94040792_94042163_94042239_94046281_94046324_94046402
ENSMUST00000132590.8	chr6	-	3535	12	FSM	ENSMUSG00000030254.17	ENSMUST00000132590.8	3535	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	71.295566841422	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTGTTGTTGTTGTA	NA	False	NA	-4	True	AATAAA	-20	NA	112673609	112603375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673563
ENSMUST00000132702.8	chr7	+	1899	6	FSM	ENSMUSG00000042289.12	ENSMUST00000132702.8	1899	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	11.2178429299041	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTACCTTTTACCCA	1884	False	NA	14	True	AATAAA	-15	NA	127399775	127402974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401286_127401407_127401571_127401957
ENSMUST00000132803.2	chr17	+	389	2	FSM	ENSMUSG00000044533.16	ENSMUST00000132803.2	389	2	0	0	0	0	multi-exon	FALSE	canonical	3	10975	junction_1	0	1642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGTTTTTTTTTGTCT	7576	False	NA	0	True	AATAAA	-19	NA	24940422	24940899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24940689_24940776
ENSMUST00000132862.8	chr7	-	2070	19	FSM	ENSMUSG00000078762.11	ENSMUST00000132862.8	2070	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	57.7150567683839	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364358	30353135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30353481_30353594_30353728_30356373_30356443_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ENSMUST00000132866.2	chr6	+	1253	5	FSM	ENSMUSG00000058440.15	ENSMUST00000132866.2	1253	5	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_4	120.692791831161	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTGTCTCTGTGTAAT	NA	False	NA	NA	False	NA	NA	NA	30116113	30140903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
ENSMUST00000132877.2	chr7	+	1596	2	FSM	ENSMUSG00000046364.15	ENSMUST00000132877.2	1596	2	0	0	0	0	multi-exon	FALSE	canonical	3	7451	junction_1	0	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAAACCACACCAG	NA	False	NA	NA	False	NA	NA	NA	109118402	109120360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_109118430_109118791
ENSMUST00000132880.3	chr13	-	663	2	FSM	ENSMUSG00000085634.3	ENSMUST00000132880.3	663	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTTTTTTTTGTTTTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	111686445	111658883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_111659245_111686143
ENSMUST00000132899.8	chr8	+	823	5	FSM	ENSMUSG00000031860.18	ENSMUST00000132899.8	823	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.6744218394172	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGTTTTCAATACAG	2244	False	NA	5	True	ATTAAA	-18	NA	70285311	70324942	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70285502_70311729_70311804_70322678_70322833_70323227_70323335_70324644
ENSMUST00000132906.8	chr4	-	1874	8	FSM	ENSMUSG00000028923.15	ENSMUST00000132906.8	1874	8	0	0	0	0	multi-exon	TRUE	canonical	1	6	junction_6	160.29029787182	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATGGATATGTTTTT	8500	False	NA	-10	True	AATAAA	-22	NA	140805653	140793822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801074_140802270_140802372_140805523
ENSMUST00000132948.2	chr6	+	1761	17	FSM	ENSMUSG00000030263.14	ENSMUST00000132948.2	1761	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	14.1684894660652	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	11	True	AATAAA	-16	NA	145091202	145120654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_145091249_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ENSMUST00000133016.8	chr2	-	4543	27	FSM	ENSMUSG00000027185.16	ENSMUST00000133016.8	4543	27	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_23	29.6333611774729	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591586	103551604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ENSMUST00000133032.8	chr17	+	2670	9	FSM	ENSMUSG00000024188.17	ENSMUST00000133032.8	2670	9	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	146.829354609356	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	14	True	ATTAAA	-26	NA	26471957	26499694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26472066_26472947_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ENSMUST00000133057.2	chr1	-	721	3	FSM	ENSMUSG00000026399.13	ENSMUST00000133057.2	721	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	29	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGTAAAAGTGAGTATG	NA	False	NA	NA	False	NA	NA	NA	130390188	130387329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_130387511_130389558_130389745_130389834
ENSMUST00000133064.8	chr18	-	1055	9	FSM	ENSMUSG00000073599.11	ENSMUST00000133064.8	1055	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	1.78535710713571	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTTCTTTTAAGGTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	35855409	35846138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_35846488_35846693_35846791_35848231_35848269_35848475_35848575_35849005_35849129_35849805_35849866_35850205_35850344_35851400_35851440_35855296
ENSMUST00000133107.2	chr4	-	848	5	FSM	ENSMUSG00000040044.12	ENSMUST00000133107.2	848	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	289.805969572747	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGGCTTAATGGGTCATC	NA	False	NA	NA	False	NA	NA	NA	34598620	34592072	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_34592500_34593060_34593175_34595076_34595237_34597307_34597442_34598607
ENSMUST00000133117.8	chr8	+	2099	6	FSM	ENSMUSG00000031570.18	ENSMUST00000133117.8	2099	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	15.0545674132471	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGTGTGTGTGAGT	NA	False	NA	17	True	AATAAA	-29	NA	26210090	26214914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26212628_26214106
ENSMUST00000133131.2	chr11	+	1394	10	FSM	ENSMUSG00000020708.13	ENSMUST00000133131.2	1394	10	0	0	0	0	multi-exon	FALSE	canonical	3	2261	junction_6	179.113523556954	8915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACAACTCCAGTTTGTT	4536	False	NA	15	True	AATAAA	-19	NA	106146979	106153946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153518_106153622_106153710_106153834
ENSMUST00000133157.8	chr4	+	2986	12	FSM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	16.5753974809925	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATGCTGACGACAATAT	5049	False	NA	33	True	ATTAAA	-15	NA	45018582	45033692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ENSMUST00000133271.2	chr7	-	1449	8	FSM	ENSMUSG00000002980.15	ENSMUST00000133271.2	1449	8	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_4	38.4102452319106	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTCGCTAGAAAGAAAGCT	3964	False	NA	NA	False	AAAAAG	-13	NA	19504420	19497597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ENSMUST00000133280.2	chr13	-	1609	2	FSM	ENSMUSG00000118537.2	ENSMUST00000133280.2	1609	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGATTTTGTATTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	104314947	104310229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_104311513_104314621
ENSMUST00000133308.3	chr17	-	1479	7	FSM	ENSMUSG00000002076.13	ENSMUST00000133308.3	1479	7	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	334.770941590415	1119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	-13	True	AATAAA	-30	NA	32253511	32165055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
ENSMUST00000133316.8	chr5	+	1031	6	FSM	ENSMUSG00000029177.10	ENSMUST00000133316.8	1031	6	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_2	579.285905231605	2906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGCGCTTGAATCT	9186	False	NA	9	True	AATATA	-14	NA	30824240	30831722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_30824458_30827035_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ENSMUST00000133322.2	chr2	+	902	4	FSM	ENSMUSG00000017861.12	ENSMUST00000133322.2	902	4	0	0	0	0	multi-exon	FALSE	canonical	3	3077	junction_1	55.2227811284035	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAGCTGATGTCCTCTA	NA	False	NA	NA	False	NA	NA	NA	162917072	162922699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_162917696_162919706_162919810_162921513_162921628_162922637
ENSMUST00000133350.8	chrX	-	594	3	FSM	ENSMUSG00000085757.8	ENSMUST00000133350.8	594	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	27.5	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATATGAGTTGATTT	NA	False	NA	NA	False	AATAAA	-25	NA	61559675	61554144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_61554605_61558040_61558144_61559644
ENSMUST00000133412.8	chr3	-	666	5	FSM	ENSMUSG00000005779.13	ENSMUST00000133412.8	666	5	0	0	0	0	multi-exon	FALSE	canonical	3	1712	junction_2	94.1604348970416	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAAATTCTGGAGCCAGG	NA	False	NA	NA	False	NA	NA	NA	94794173	94792208	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_94792345_94792970_94793053_94793385_94793533_94793751_94793959_94794079
ENSMUST00000133426.8	chr11	-	3593	12	FSM	ENSMUSG00000020719.15	ENSMUST00000133426.8	3593	12	0	0	0	0	multi-exon	FALSE	canonical	3	3830	junction_7	165.368159266449	1217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_106673083_106673294_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ENSMUST00000133449.8	chr2	-	933	6	FSM	ENSMUSG00000085385.8	ENSMUST00000133449.8	933	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	32.8048776861003	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTCAACCCATGAATT	8289	False	NA	3	True	AATAAA	-32	NA	158203500	158197684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_158197962_158199117_158199184_158201101_158201252_158202383_158202520_158202862_158202991_158203324
ENSMUST00000133455.2	chr4	+	2251	3	FSM	ENSMUSG00000085843.2	ENSMUST00000133455.2	2251	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTCTGCCTTGTTT	NA	False	NA	NA	False	TATAAA	-41	NA	98682004	98687137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_98682120_98684245_98684324_98685079
ENSMUST00000133530.8	chr4	-	646	4	FSM	ENSMUSG00000033379.14	ENSMUST00000133530.8	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	2536	junction_3	23.6690139681023	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGAGGCTTCTGTTGG	NA	False	NA	-5	True	AATAAA	-17	NA	117743091	117741526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000
ENSMUST00000133548.5	chr5	+	562	3	FSM	ENSMUSG00000086219.8	ENSMUST00000133548.5	562	3	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_2	4	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTCATTCCGTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	116576778	116600157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_116576898_116577427_116577496_116599782
ENSMUST00000133553.8	chr7	+	825	6	FSM	ENSMUSG00000030611.11	ENSMUST00000133553.8	825	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	143.488814895099	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	78433103	78442737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_78433172_78433320_78433435_78438422_78438522_78440384_78440515_78441621_78441688_78442389
ENSMUST00000133575.8	chr3	-	1176	5	FSM	ENSMUSG00000027953.14	ENSMUST00000133575.8	1176	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	61.3697808371514	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	-31	True	AATAAA	-17	NA	89177833	89175552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89175906_89175979_89176100_89176356_89176606_89177133_89177447_89177692
ENSMUST00000133595.9	chr17	+	2268	9	FSM	ENSMUSG00000025736.16	ENSMUST00000133595.9	2268	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	9.19238815542512	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGGTGGATGCGCCG	NA	False	NA	18	True	NA	NA	NA	26047840	26050817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26048138_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048915_26049036_26049112_26049181_26049273_26049409_26049483
ENSMUST00000133613.2	chr4	-	317	2	FSM	ENSMUSG00000059291.16	ENSMUST00000133613.2	317	2	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	0	2262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACAGTTGTGTGTTTGT	NA	False	NA	-4	True	AATAAA	-40	NA	135777837	135777257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_135777328_135777590
ENSMUST00000133615.2	chr2	-	3870	5	FSM	ENSMUSG00000027109.17	ENSMUST00000133615.2	3870	5	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_4	47.8924576525365	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGTTTGTTGTAGTCC	4045	False	NA	-6	True	AATAAA	-18	NA	72809630	72766995	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241
ENSMUST00000133617.3	chr9	-	1902	10	FSM	ENSMUSG00000032786.17	ENSMUST00000133617.3	1902	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	71.6495242202462	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAGTCCTGGTTAGTGTG	8580	False	NA	-14	True	AATAAA	-31	NA	106125051	106111125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115439_106115841_106116022_106116730_106116916_106118834_106118985_106120360_106120592_106123957_106124178_106124983
ENSMUST00000133683.8	chr8	-	632	4	FSM	ENSMUSG00000058833.12	ENSMUST00000133683.8	632	4	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	338.518340222013	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70959076	70956944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70957160_70957633_70957711_70958405_70958611_70958941
ENSMUST00000133697.2	chr2	-	845	3	FSM	ENSMUSG00000026966.7	ENSMUST00000133697.2	845	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	398.5	2709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGCTAGCTACCA	NA	False	NA	-6	True	AATAAA	-16	NA	25162422	25161050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_25161594_25161940_25162141_25162320
ENSMUST00000133723.2	chr6	+	552	2	FSM	ENSMUSG00000087626.2	ENSMUST00000133723.2	552	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAAAAGTCTCTTATTTA	NA	False	NA	NA	False	AGTAAA	-22	NA	52149860	52151039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_52149989_52150615
ENSMUST00000133727.8	chr11	+	985	7	FSM	ENSMUSG00000010362.10	ENSMUST00000133727.8	985	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	529.496117916731	357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTACGTAACAAAGGTGT	NA	False	NA	1	True	AAAAAG	-31	NA	101519214	101526898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101519279_101521063_101521187_101521645_101521806_101523840_101523969_101524627_101524727_101525613_101525700_101526573
ENSMUST00000133736.2	chr15	-	1870	5	FSM	ENSMUSG00000022634.10	ENSMUST00000133736.2	1870	5	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_2	48.2875501552937	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTTGCATTTTGTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	93234816	93182161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_93183504_93184290_93184444_93215419_93215490_93234220_93234347_93234637
ENSMUST00000133750.8	chr7	+	509	3	FSM	ENSMUSG00000040466.17	ENSMUST00000133750.8	509	3	0	0	0	0	multi-exon	FALSE	canonical	2	274	junction_1	60	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGAGCACCAACTGTG	NA	False	NA	9	True	ATTAAA	-22	NA	27147478	27159188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27147622_27158680_27158846_27158987
ENSMUST00000133758.9	chr7	+	2019	14	FSM	ENSMUSG00000030924.17	ENSMUST00000133758.9	2019	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	12.9642202201737	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAACATTTCCTCCTCTTA	NA	False	NA	12	True	AATAAA	-12	NA	119393341	119448161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_119393726_119404365_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758_119424862_119426525_119426600_119427314_119427430_119431893_119431999_119433486_119433625_119442464_119442558_119443070_119443288_119447954
ENSMUST00000133785.2	chr16	+	2858	3	FSM	ENSMUSG00000060636.15	ENSMUST00000133785.2	2858	3	0	0	0	0	multi-exon	FALSE	canonical	3	3858	junction_1	3305	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGTCCTAAATTGAGT	NA	False	NA	20	True	AATAAA	-35	NA	32876851	32880545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32876881_32877505_32877549_32877759
ENSMUST00000133826.2	chr13	-	569	4	FSM	ENSMUSG00000021660.15	ENSMUST00000133826.2	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	6398	junction_3	146.166571645731	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAGGTTCAGAATTG	NA	False	NA	NA	False	NA	NA	NA	98453504	98449546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_98449802_98450146_98450261_98452737_98452807_98453373
ENSMUST00000133849.2	chr17	-	1673	11	FSM	ENSMUSG00000041319.15	ENSMUST00000133849.2	1673	11	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_8	40.7603974465412	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	794	False	NA	-21	True	AATAAA	-14	NA	23892816	23887591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889527_23889614_23889680_23889765_23889882_23892487
ENSMUST00000133901.2	chr16	-	523	2	FSM	ENSMUSG00000022889.8	ENSMUST00000133901.2	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	1018	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCTCATTAAAGTATTTT	NA	False	NA	NA	False	NA	NA	NA	84532118	84531055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_84531502_84532041
ENSMUST00000133924.8	chr8	+	511	4	FSM	ENSMUSG00000036054.16	ENSMUST00000133924.8	511	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	17.1723291631883	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	8346	False	NA	26	True	AATAAA	-17	NA	70712401	70715755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70712470_70713118_70713240_70713880_70713968_70715520
ENSMUST00000133967.8	chr11	+	421	4	FSM	ENSMUSG00000070394.11	ENSMUST00000133967.8	421	4	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	597.808404832927	3125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTTTGGTGTCTTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	69729339	69730439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69729400_69729745_69729778_69730013_69730095_69730191
ENSMUST00000133968.2	chr19	+	442	3	FSM	ENSMUSG00000032946.17	ENSMUST00000133968.2	442	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	122	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGGGTCATGTCACT	NA	False	NA	14	True	NA	NA	NA	6451748	6453668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6451889_6453021_6453117_6453461
ENSMUST00000134014.2	chr2	+	390	2	FSM	ENSMUSG00000086939.2	ENSMUST00000134014.2	390	2	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGATAGATTATCACTAC	NA	False	NA	NA	False	AATAAA	-16	NA	33379793	33393644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_33379998_33393458
ENSMUST00000134040.2	chr14	+	661	5	FSM	ENSMUSG00000060126.15	ENSMUST00000134040.2	661	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2408.11035876681	7274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGAACTCTTTGCTGT	1645	False	NA	4	True	AATAAA	-15	NA	76083339	76085737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_76083388_76083642_76083834_76084133_76084240_76084683_76084801_76085538
ENSMUST00000134050.8	chr4	-	442	4	FSM	ENSMUSG00000028470.11	ENSMUST00000134050.8	442	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	328.783616785671	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATCCCTGTCTTAA	7059	False	NA	-6	True	AATAAA	-15	NA	43654956	43654227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_43654412_43654512_43654615_43654715_43654821_43654905
ENSMUST00000134053.8	chr9	-	1905	10	FSM	ENSMUSG00000032786.17	ENSMUST00000134053.8	1905	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	56.0801894996886	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATCTATAGTAAAATCATA	6258	False	NA	-29	True	AATAAA	-16	NA	106120833	106111140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106120753
ENSMUST00000134080.2	chr13	-	1075	5	FSM	ENSMUSG00000041431.17	ENSMUST00000134080.2	1075	5	0	0	0	0	multi-exon	FALSE	canonical	3	3352	junction_4	271.501726513847	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACTTGCTCTTCAATA	NA	False	NA	-50	True	NA	NA	NA	100918541	100916116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132
ENSMUST00000134089.8	chr11	+	1904	6	FSM	ENSMUSG00000020453.18	ENSMUST00000134089.8	1904	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.2513448026415	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	5294	False	NA	14	True	ATTAAA	-16	NA	3239280	3259083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_3239348_3243279_3243344_3244455_3244548_3249033_3249206_3256287_3256361_3257647
ENSMUST00000134101.8	chr2	+	812	5	FSM	ENSMUSG00000027374.13	ENSMUST00000134101.8	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_4	81.6160982894919	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTGCATCATAGAAAAC	4164	False	NA	NA	False	AATAAA	-15	NA	127429338	127437977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583
ENSMUST00000134115.8	chr1	+	3268	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	0	0	0	0	multi-exon	FALSE	canonical	3	1843	junction_1	136.918543302213	6020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTGTTCTATTGCTTG	NA	False	NA	NA	False	NA	NA	NA	180978495	180996559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
ENSMUST00000134159.3	chr4	-	2113	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCCAGGCTGATGC	NA	False	NA	NA	False	AATAAA	-17	NA	130253736	130209175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
ENSMUST00000134201.2	chr7	-	775	4	FSM	ENSMUSG00000002608.9	ENSMUST00000134201.2	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	43.3666538560063	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCCTCTAGACTTGGCC	NA	False	NA	NA	False	NA	NA	NA	25415531	25412359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_25412539_25413777_25413908_25414175_25414270_25415159
ENSMUST00000134214.3	chr15	-	899	4	FSM	ENSMUSG00000116358.2	ENSMUST00000134214.3	899	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	890.337139639936	349	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGGCCACTTATGCCCC	NA	False	NA	NA	False	NA	NA	NA	98851432	98830017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98830444_98849068_98849218_98849349_98849573_98851331
ENSMUST00000134287.2	chr1	+	1818	11	FSM	ENSMUSG00000038936.14	ENSMUST00000134287.2	1818	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	60.167765456264	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCCCCTTTTTTGGT	NA	False	NA	12	True	AATAAA	-19	NA	179495774	179514754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
ENSMUST00000134330.2	chrX	+	930	4	FSM	ENSMUSG00000008682.14	ENSMUST00000134330.2	930	4	0	0	0	0	multi-exon	FALSE	canonical	3	9221	junction_2	231.174296918052	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGAGAGCCCTGCATTCC	NA	False	NA	-79	True	AATATA	-25	NA	73315014	73316650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73315325_73315405_73315514_73315784_73315924_73316277
ENSMUST00000134335.2	chr11	-	1320	2	FSM	ENSMUSG00000020935.9	ENSMUST00000134335.2	1320	2	0	0	0	0	multi-exon	FALSE	canonical	3	1127	junction_1	0	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGAATTCCACTTGGC	8777	False	NA	-7	True	NA	NA	NA	102888374	102884874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102885999_102888178
ENSMUST00000134462.8	chr7	-	1372	7	FSM	ENSMUSG00000053291.16	ENSMUST00000134462.8	1372	7	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_1	25.5451669705946	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCGGCCTCTGTCATT	NA	False	NA	-4	True	CATAAA	-16	NA	26878240	26867851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875664_26878151
ENSMUST00000134479.8	chr19	-	1438	9	FSM	ENSMUSG00000037916.15	ENSMUST00000134479.8	1438	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	478.184326384711	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAACTTTGCTTTTC	6566	False	NA	3	True	AATAAA	-30	NA	4062666	4057496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4062550
ENSMUST00000134503.8	chr10	+	2140	14	FSM	ENSMUSG00000006345.11	ENSMUST00000134503.8	2140	14	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	59.3897965057474	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTCTTGTGTATGA	NA	False	NA	36	True	NA	NA	NA	75404489	75422034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_75404605_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ENSMUST00000134527.3	chr11	-	1540	2	FSM	ENSMUSG00000085156.9	ENSMUST00000134527.3	1540	2	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_1	0	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCACTGTCTCCTGTTAT	NA	False	NA	NA	False	NA	NA	NA	6478763	6477050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6478375_6478547
ENSMUST00000134542.2	chr13	-	780	5	FSM	ENSMUSG00000021660.15	ENSMUST00000134542.2	780	5	0	0	0	0	multi-exon	FALSE	canonical	3	5972	junction_2	394.186821190156	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGAATAAAGTTTGGAAAG	NA	False	NA	-62	True	AATAAA	-13	NA	98452884	98446449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737
ENSMUST00000134585.8	chr11	+	2377	5	FSM	ENSMUSG00000018666.14	ENSMUST00000134585.8	2377	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	281.892155797213	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	96679962	96698975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693825_96697441
ENSMUST00000134593.2	chr8	+	707	3	FSM	ENSMUSG00000031767.14	ENSMUST00000134593.2	707	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTTAATGTCATTCAT	NA	False	NA	NA	False	ACTAAA	-29	NA	114860381	114875128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_114860441_114863077_114863232_114874634
ENSMUST00000134611.4	chr2	-	1017	5	FSM	ENSMUSG00000017307.17	ENSMUST00000134611.4	1017	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	121.847240428333	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGACCTTTAATAGAACTA	8167	False	NA	2	True	AATAAA	-22	NA	164646801	164634684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164646609
ENSMUST00000134619.8	chr6	+	786	4	FSM	ENSMUSG00000042097.18	ENSMUST00000134619.8	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	8.52447456836295	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTTATCTTTGAAAT	NA	False	NA	NA	False	TTTAAA	-31	NA	117840037	117847700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_117840104_117843355_117843536_117846178_117846235_117847216
ENSMUST00000134636.2	chr7	+	399	2	FSM	ENSMUSG00000025508.14	ENSMUST00000134636.2	399	2	0	0	0	0	multi-exon	FALSE	canonical	3	11523	junction_1	0	1598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCTTTAAACATTTTG	5569	False	NA	26	True	AATAAA	-19	NA	141030734	141031262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_141031016_141031144
ENSMUST00000134637.8	chr6	+	1917	5	FSM	ENSMUSG00000023505.14	ENSMUST00000134637.8	1917	5	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_1	91.4969261778777	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTCATGATCTTTCCC	1362	False	NA	NA	False	CATAAA	-25	NA	124807197	124810495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_124807237_124807465_124807614_124808324_124809403_124809528_124809633_124809947
ENSMUST00000134651.2	chr2	+	470	3	FSM	ENSMUSG00000038685.19	ENSMUST00000134651.2	470	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	1	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180997762	180998409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180997873_180997950_180998052_180998150
ENSMUST00000134674.8	chr9	+	3106	16	FSM	ENSMUSG00000031918.17	ENSMUST00000134674.8	3106	16	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	100.823057327622	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCCACAGTTGTCTA	NA	False	NA	27	True	ATTAAA	-16	NA	13660492	13717777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_13660697_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUST00000134709.2	chr16	+	471	2	FSM	ENSMUSG00000046516.11	ENSMUST00000134709.2	471	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTTATTAAAAAACAGAAG	NA	False	NA	-12	True	GATAAA	-17	NA	38169601	38173085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_38169692_38172704
ENSMUST00000134732.8	chr11	-	2201	13	FSM	ENSMUSG00000018669.15	ENSMUST00000134732.8	2201	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	315.392733570209	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCACCTTTACTGGCT	NA	False	NA	-13	True	GATAAA	-16	NA	96807322	96798251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ENSMUST00000134746.8	chr9	-	1756	11	FSM	ENSMUSG00000031922.13	ENSMUST00000134746.8	1756	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	78.9119129156048	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGACTTTCCAGGTCTCAT	NA	False	NA	NA	False	CATAAA	-45	NA	13738321	13719844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728112_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ENSMUST00000134760.2	chr4	-	579	4	FSM	ENSMUSG00000063882.13	ENSMUST00000134760.2	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	488.184618993903	6532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCTTCCTTTGCC	7694	False	NA	-7	True	AATAAA	-17	NA	115932231	115924161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_115924370_115927059_115927222_115927864_115927955_115932112
ENSMUST00000134777.10	chr8	+	931	6	FSM	ENSMUSG00000031860.18	ENSMUST00000134777.10	931	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	11.2178429299041	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGTTTTCAATACAG	2272	False	NA	5	True	ATTAAA	-18	NA	70285339	70324942	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70285502_70311729_70311804_70319117_70319254_70322678_70322833_70323227_70323335_70324644
ENSMUST00000134789.2	chr2	+	1407	5	FSM	ENSMUSG00000027091.15	ENSMUST00000134789.2	1407	5	0	0	0	0	multi-exon	FALSE	canonical	3	620	junction_1	80.8223360216716	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGGCCTTTTTCTTTTA	NA	False	NA	28	True	AATAAA	-36	NA	83490353	83494966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ENSMUST00000134797.8	chr10	+	486	3	FSM	ENSMUSG00000020225.11	ENSMUST00000134797.8	486	3	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_1	20.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGCTTGTCTGTGCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	120044684	120053622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_120044848_120051445_120051555_120053408
ENSMUST00000134816.2	chr16	+	776	2	FSM	ENSMUSG00000022884.17	ENSMUST00000134816.2	776	2	0	0	0	0	multi-exon	FALSE	canonical	3	1632	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTCAGGTTTCACAACT	6053	False	NA	NA	False	NA	NA	NA	22926507	22928050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22926571_22927337
ENSMUST00000134821.2	chr19	-	2305	4	FSM	ENSMUSG00000024944.7	ENSMUST00000134821.2	2305	4	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_1	55.8091987638836	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTGTGAGTCACTGAC	NA	False	NA	1	True	AATAAA	-27	NA	6191170	6184403	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6184832_6186008_6187671_6187759_6187871_6191066
ENSMUST00000134822.8	chr8	+	2753	8	FSM	ENSMUSG00000055681.15	ENSMUST00000134822.8	2753	8	0	0	0	0	multi-exon	FALSE	canonical	3	1283	junction_7	34.9203174588744	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATACCCACCAGGC	703	False	NA	29	True	AATAAA	-18	NA	70755418	70765643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70755583_70757283_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ENSMUST00000134840.8	chr1	-	1120	8	FSM	ENSMUSG00000026189.14	ENSMUST00000134840.8	1120	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	115.181666625078	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTTAAGGATTATTTA	NA	False	NA	-1	True	AATAAA	-24	NA	72323418	72298325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72314044_72314127_72314811_72314962_72316445_72316580_72323251
ENSMUST00000134846.8	chr5	+	1007	7	FSM	ENSMUSG00000029177.10	ENSMUST00000134846.8	1007	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	786.091474038204	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTGCATCTTTTACT	9201	False	NA	11	True	NA	NA	NA	30824255	30831659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_30824458_30826342_30826397_30827035_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ENSMUST00000134932.2	chr17	+	1950	6	FSM	ENSMUSG00000024160.17	ENSMUST00000134932.2	1950	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	61.4504678582678	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTATTGTTTATC	NA	False	NA	NA	False	ATTAAA	-25	NA	25105732	25111126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25106080_25106753_25106892_25109256_25109435_25109541_25109910_25109984_25110111_25110333
ENSMUST00000134939.9	chr9	+	2374	23	FSM	ENSMUSG00000032604.17	ENSMUST00000134939.9	2374	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	117.634370153125	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTCTCTGTTGTCTGCCT	NA	False	NA	18	True	AATAAA	-21	NA	108385258	108393140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ENSMUST00000135011.2	chr2	+	510	2	FSM	ENSMUSG00000016344.15	ENSMUST00000135011.2	510	2	0	0	0	0	multi-exon	FALSE	canonical	3	861	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGTATGTTTGAAAC	4003	False	NA	1	True	AATAAA	-17	NA	180829706	180830297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180829894_180829974
ENSMUST00000135017.2	chr3	+	1405	7	FSM	ENSMUSG00000005687.15	ENSMUST00000135017.2	1405	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	1366.36225268249	39195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTCATTTTAATCCC	5046	False	NA	NA	False	NA	NA	NA	103079087	103086482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_103079182_103079263_103079357_103080549_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ENSMUST00000135037.8	chr11	+	901	2	FSM	ENSMUSG00000087497.8	ENSMUST00000135037.8	901	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTTCATGTTTCTTA	4234	False	NA	NA	False	AATAAA	-22	NA	63970309	63974085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_63970604_63973478
ENSMUST00000135091.2	chr2	-	800	2	FSM	ENSMUSG00000051319.7	ENSMUST00000135091.2	800	2	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_1	0	4130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGACCAAAGCCTTGGTT	NA	False	NA	-5	True	GATAAA	-14	NA	127634408	127633307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_127633753_127634053
ENSMUST00000135123.3	chr17	-	1476	4	FSM	ENSMUSG00000024007.16	ENSMUST00000135123.3	1476	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	716.343182808042	5978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTGTGGTCTAGTAT	9927	False	NA	-28	True	AATAAA	-19	NA	29482922	29469805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_29470700_29471223_29471293_29480710_29481147_29482845
ENSMUST00000135136.8	chr17	-	943	4	FSM	ENSMUSG00000034647.16	ENSMUST00000135136.8	943	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	25.5734237050888	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTTTTTAGGAAATTA	NA	False	NA	NA	False	AATAAA	-30	NA	66384034	66344133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_66344635_66356780_66356929_66359948_66360087_66383878
ENSMUST00000135148.2	chr11	-	562	4	FSM	ENSMUSG00000018921.12	ENSMUST00000135148.2	562	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	310.061284264901	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTCAGATCTTTTAAGTG	NA	False	NA	NA	False	NA	NA	NA	70300857	70293456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70293580_70296452_70296559_70297082_70297148_70300589
ENSMUST00000135192.8	chr1	+	4622	33	FSM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	0	0	0	0	multi-exon	FALSE	canonical	1	295	junction_11	137.915678495956	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTTGCCGTTTCC	2764	False	NA	10	True	AATAAA	-15	NA	171910095	171949892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ENSMUST00000135198.2	chr15	+	456	2	FSM	ENSMUSG00000022477.14	ENSMUST00000135198.2	456	2	0	0	0	0	multi-exon	FALSE	canonical	3	1775	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTAGCCTATGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	81756684	81773889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_81756750_81773498
ENSMUST00000135213.8	chrX	-	416	3	FSM	ENSMUSG00000031387.15	ENSMUST00000135213.8	416	3	0	0	0	0	multi-exon	FALSE	canonical	3	1965	junction_1	27	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72970007	72965727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72965870_72965956_72966045_72969821
ENSMUST00000135221.8	chr14	-	3824	30	FSM	ENSMUSG00000002319.17	ENSMUST00000135221.8	3824	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	98.6432334976062	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGCTGTGACATCATAC	9472	False	NA	-27	True	AATAAA	-30	NA	55873414	55863196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866142_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ENSMUST00000135225.8	chr5	-	4310	27	FSM	ENSMUSG00000062234.15	ENSMUST00000135225.8	4310	27	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_23	73.3495017589351	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGCTTGTAAAGCAC	NA	False	NA	-28	True	ATTAAA	-23	NA	108777605	108717279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ENSMUST00000135241.8	chr1	+	1461	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAAGGCTGCAGGT	NA	False	NA	116	True	AATAAA	-21	NA	162398158	162422934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
ENSMUST00000135310.8	chr9	-	4413	9	FSM	ENSMUSG00000036986.17	ENSMUST00000135310.8	4413	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	114.3314807916	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCCTAACATTCTGATT	2204	False	NA	-11	True	AGTAAA	-13	NA	58157016	58125368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ENSMUST00000135345.2	chr5	+	632	2	FSM	ENSMUSG00000041453.13	ENSMUST00000135345.2	632	2	0	0	0	0	multi-exon	FALSE	canonical	3	8667	junction_1	0	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146772015	146772796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_146772525_146772673
ENSMUST00000135369.2	chr11	+	688	4	FSM	ENSMUSG00000034121.13	ENSMUST00000135369.2	688	4	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	6.68331255192114	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACAAGGCAGGCCGTGC	846	False	NA	NA	False	NA	NA	NA	87752762	87754087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_87752945_87753393_87753477_87753566_87753665_87753762
ENSMUST00000135395.8	chr9	+	924	7	FSM	ENSMUSG00000032249.15	ENSMUST00000135395.8	924	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	197.739517210563	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCCCTCCTATTCCTGC	NA	False	NA	NA	False	NA	NA	NA	62249356	62284954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_62249534_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
ENSMUST00000135417.2	chr15	-	2412	2	FSM	ENSMUSG00000058600.14	ENSMUST00000135417.2	2412	2	0	0	0	0	multi-exon	FALSE	canonical	3	5662	junction_1	0	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	423	False	NA	-20	True	AATAAA	-27	NA	34443306	34440650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_34442927_34443170
ENSMUST00000135432.8	chr8	+	3010	14	FSM	ENSMUSG00000031629.15	ENSMUST00000135432.8	3010	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	96.1013395100261	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAGATACTATTTTAAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	47005089	47033042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ENSMUST00000135446.8	chr8	-	520	4	FSM	ENSMUSG00000090137.9	ENSMUST00000135446.8	520	4	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_3	10349.9061616787	4664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCATACCTGGCATGTG	NA	False	NA	-69	True	AATAAA	-4	NA	70963451	70960977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70963333
ENSMUST00000135453.2	chr1	+	554	3	FSM	ENSMUSG00000033021.17	ENSMUST00000135453.2	554	3	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_2	12	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75418809	75419817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_75418922_75419087_75419257_75419544
ENSMUST00000135459.2	chr2	-	316	3	FSM	ENSMUSG00000051730.16	ENSMUST00000135459.2	316	3	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	17.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAACTACTTGTCTCTA	9112	False	NA	-25	True	AATAAA	-14	NA	69704394	69701561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_69701661_69702075_69702126_69704227
ENSMUST00000135464.2	chr5	+	1630	4	FSM	ENSMUSG00000029390.14	ENSMUST00000135464.2	1630	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1678.67149853686	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTATTTTGTGTTT	NA	False	NA	2	True	AATAAA	-12	NA	124681142	124688559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_124681228_124681549_124681571_124684958_124685067_124687143
ENSMUST00000135484.8	chr1	+	1570	7	FSM	ENSMUSG00000026201.13	ENSMUST00000135484.8	1570	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	83.8424448328861	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATATTTTAGGTCAATG	NA	False	NA	6	True	AATAAA	-14	NA	75187519	75190883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_75187644_75187883_75188059_75188568_75188789_75189243_75189651_75189776_75189873_75190219_75190342_75190457
ENSMUST00000135527.2	chr9	-	957	2	FSM	ENSMUSG00000074284.7	ENSMUST00000135527.2	957	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAATCCTTTATTCAG	NA	False	NA	NA	False	AATAAA	-40	NA	56979250	56964486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_56965086_56978892
ENSMUST00000135573.8	chr4	+	2294	6	FSM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	0	0	0	0	multi-exon	FALSE	canonical	3	22651	junction_3	699.316637868713	77700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGTTCATTGGGTATC	NA	False	NA	NA	False	AATAAA	-15	NA	116542740	116558019	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ENSMUST00000135582.8	chr4	-	1771	10	FSM	ENSMUSG00000009640.12	ENSMUST00000135582.8	1771	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_9	54.4190416928251	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	False	NA	-35	True	AATAGA	-20	NA	117539450	117531877	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539191_117539410
ENSMUST00000135602.3	chr3	-	500	4	FSM	ENSMUSG00000037152.12	ENSMUST00000135602.3	500	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2769.52864020015	3350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGACGGAGTCACTGG	NA	False	NA	-32	True	AATAAA	-18	NA	51316087	51312898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51315910
ENSMUST00000135678.2	chr18	+	774	5	FSM	ENSMUSG00000025428.16	ENSMUST00000135678.2	774	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2433.22053819624	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGTTAGTTTTGTAAGA	NA	False	NA	NA	False	TTTAAA	-22	NA	77861691	77870355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_77861811_77863476_77863556_77865218_77865312_77869521_77869650_77870000
ENSMUST00000135690.2	chrX	+	523	5	FSM	ENSMUSG00000008682.14	ENSMUST00000135690.2	523	5	0	0	0	0	multi-exon	FALSE	canonical	2	85	junction_4	3846.15960244762	1917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCCTACCAAATCGTTC	NA	False	NA	-38	True	NA	NA	NA	73314584	73316691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316520
ENSMUST00000135691.2	chr3	-	477	4	FSM	ENSMUSG00000062006.13	ENSMUST00000135691.2	477	4	0	0	0	0	multi-exon	FALSE	canonical	3	6284	junction_3	871.596619237745	40174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAGTAATAAAAATCAA	NA	False	NA	-44	True	AATAGA	-11	NA	130523991	130520512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_130520609_130522396_130522501_130522699_130522952_130523966
ENSMUST00000135708.2	chr17	-	526	3	FSM	ENSMUSG00000040048.15	ENSMUST00000135708.2	526	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1144.5	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTAAAGCCTACCAGGAC	NA	False	NA	NA	False	NA	NA	NA	24943386	24941378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24941495_24941628_24941813_24943160
ENSMUST00000135711.8	chrX	-	2125	7	FSM	ENSMUSG00000031387.15	ENSMUST00000135711.8	2125	7	0	0	0	0	multi-exon	FALSE	canonical	3	1962	junction_4	102.832252830628	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTTGTGTGCGCGCCTC	NA	False	NA	-4	True	AATAAA	-16	NA	72974423	72965728	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72974124_72974319
ENSMUST00000135724.2	chr3	-	437	2	FSM	ENSMUSG00000062908.13	ENSMUST00000135724.2	437	2	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATTAACTGTAACATAC	161	False	NA	NA	False	AATAAA	-28	NA	153650100	153647238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_153647608_153650032
ENSMUST00000135780.2	chr4	-	506	3	FSM	ENSMUSG00000014592.22	ENSMUST00000135780.2	506	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	493.5	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTCATCTTTTTAAAA	NA	False	NA	-23	True	AATAAA	-10	NA	151946195	151876686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_151876960_151914874_151914994_151946081
ENSMUST00000135808.8	chr19	-	1309	14	FSM	ENSMUSG00000063698.10	ENSMUST00000135808.8	1309	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_12	6.9961950774782	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCAAAAGGTATACCTTA	NA	False	NA	NA	False	AATAAA	-30	NA	60849917	60827185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60840449_60840529_60842124_60842191_60842301_60842359_60842444_60842499_60844264_60844291_60845647_60845703_60845787_60845815_60847101_60847177_60848466_60848533_60849736
ENSMUST00000135812.3	chr3	-	398	4	FSM	ENSMUSG00000033285.16	ENSMUST00000135812.3	398	4	0	0	0	0	multi-exon	FALSE	canonical	3	661	junction_2	32.7244387100664	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAACGAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	100048937	100046050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870
ENSMUST00000135877.8	chr1	+	691	6	FSM	ENSMUSG00000025967.17	ENSMUST00000135877.8	691	6	0	0	0	0	multi-exon	FALSE	canonical	1	59	junction_1	1289.84206785172	2805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACGTACAGTCCATGGAT	NA	False	NA	-58	True	NA	NA	NA	63216303	63218727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_63216410_63216881_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ENSMUST00000135906.8	chr5	-	2117	13	FSM	ENSMUSG00000029012.12	ENSMUST00000135906.8	2117	13	0	0	0	0	multi-exon	TRUE	canonical	3	527	junction_9	41.555434863164	1789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTTCTTTGGTTCTG	NA	False	NA	-3	True	AATAAA	-18	NA	22755302	22691482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ENSMUST00000135941.8	chr1	+	1735	4	FSM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	0	0	0	0	multi-exon	FALSE	canonical	3	1860	junction_3	112.860779527503	5633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTCTATTTTTTGT	NA	False	NA	5	True	NA	NA	NA	171173237	171186822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185417
ENSMUST00000135949.2	chrX	+	1764	11	FSM	ENSMUSG00000062070.13	ENSMUST00000135949.2	1764	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1444.2652838035	20611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATCTATTAAACAATAAAG	NA	False	NA	NA	False	NA	NA	NA	105230768	105247267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243722_105243943_105246044_105246223_105246442_105246542_105246844
ENSMUST00000136008.8	chr6	-	4174	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	0	0	0	0	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	6207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	148113872	148080576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ENSMUST00000136026.8	chr8	+	1686	5	FSM	ENSMUSG00000003824.13	ENSMUST00000136026.8	1686	5	0	0	0	0	multi-exon	FALSE	canonical	3	1047	junction_2	374.154045815357	2937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTGTGCTGTTCTCTTC	NA	False	NA	NA	False	CATAAA	-14	NA	85598739	85614850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85598883_85599348_85599462_85610059_85610214_85612563_85612753_85613763
ENSMUST00000136051.2	chr11	-	655	2	FSM	ENSMUSG00000085175.8	ENSMUST00000136051.2	655	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTCTCTTCTTAGACC	NA	False	NA	NA	False	NA	NA	NA	82671868	82670656	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_82671125_82671681
ENSMUST00000136123.8	chr7	-	1298	2	FSM	ENSMUSG00000045251.14	ENSMUST00000136123.8	1298	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	6925	False	NA	-4	True	ATTAAA	-17	NA	127021199	127018138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127018814_127020576
ENSMUST00000136155.2	chrX	-	1212	4	FSM	ENSMUSG00000031146.7	ENSMUST00000136155.2	1212	4	0	0	0	0	multi-exon	FALSE	canonical	3	2052	junction_3	118.4229707447	14888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGTTTAAGTCTATAAT	NA	False	NA	NA	False	AATAAA	-9	NA	7537611	7534198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_7534746_7535165_7535257_7535653_7535998_7537381
ENSMUST00000136207.2	chr2	-	1201	7	FSM	ENSMUSG00000026779.7	ENSMUST00000136207.2	1201	7	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_4	13.2759180473518	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGTTGTGATACTGG	NA	False	NA	NA	False	TATAAA	-16	NA	23045909	23026695	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ENSMUST00000136252.8	chr16	-	1362	10	FSM	ENSMUSG00000033918.17	ENSMUST00000136252.8	1362	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	534.615126360388	3113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	False	NA	-16	True	AATAAA	-24	NA	20121095	20098569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112047_20112153_20116342_20116484_20116880_20117077_20120958
ENSMUST00000136263.4	chr6	+	1601	7	FSM	ENSMUSG00000030271.15	ENSMUST00000136263.4	1601	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	81.0445693567572	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCAGTGAAGAGTGAG	2335	False	NA	10	True	AATAAA	-19	NA	113303959	113311145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113304324_113305325_113305574_113306106_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ENSMUST00000136269.8	chr2	+	878	6	FSM	ENSMUSG00000062647.17	ENSMUST00000136269.8	878	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2055.85160943099	2462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATATAGGCCACAGG	NA	False	NA	NA	False	NA	NA	NA	26800828	26803069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_26801139_26801433_26801584_26802030_26802168_26802377_26802458_26802682_26802814_26802999
ENSMUST00000136274.3	chr9	+	2909	11	FSM	ENSMUSG00000046603.17	ENSMUST00000136274.3	2909	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	5.03984126734166	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACAGCTGCGTTCCAGG	NA	False	NA	15	True	AATAAA	-15	NA	122634660	122665392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_122634754_122637831_122637902_122640822_122640959_122643496_122643654_122647914_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
ENSMUST00000136281.2	chr12	-	1160	3	FSM	ENSMUSG00000062198.6	ENSMUST00000136281.2	1160	3	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	1	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGAAATGTTTTGTT	NA	False	NA	-14	True	AATAAA	-25	NA	55100886	55092460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_55092729_55095671_55095763_55100085
ENSMUST00000136342.9	chr4	-	3152	18	FSM	ENSMUSG00000028809.17	ENSMUST00000136342.9	3152	18	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_5	197.323579826916	1492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTTTGACTATTGTTGG	NA	False	NA	-16	True	TTTAAA	-4	NA	135080555	135048404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ENSMUST00000136353.2	chr11	+	2558	12	FSM	ENSMUSG00000061981.15	ENSMUST00000136353.2	2558	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	161.803063645157	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	226	False	NA	21	True	AATAAA	-18	NA	77931129	77951260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_77931158_77940303_77940386_77944188_77944280_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ENSMUST00000136378.2	chr2	+	731	2	FSM	ENSMUSG00000074578.15	ENSMUST00000136378.2	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	1008	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGCTTTAATCTATTTCA	NA	False	NA	NA	False	NA	NA	NA	166905140	166907302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_166905648_166907078
ENSMUST00000136419.8	chr2	-	4546	24	FSM	ENSMUSG00000034032.16	ENSMUST00000136419.8	4546	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_20	109.063949954071	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	501	False	NA	-5	True	AATAAA	-17	NA	119617981	119594443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608783_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ENSMUST00000136432.2	chr10	+	2968	3	FSM	ENSMUSG00000053684.9	ENSMUST00000136432.2	2968	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	61	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTTTCTGGTCAAGCA	NA	False	NA	NA	False	AATAAA	-38	NA	121575842	121588783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_121576116_121581402_121581522_121586207
ENSMUST00000136447.2	chrX	+	1412	4	FSM	ENSMUSG00000086877.8	ENSMUST00000136447.2	1412	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	56.8057117628931	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATGAATGCTATTTCA	NA	False	NA	NA	False	ATTAAA	-31	NA	20828352	20852976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20828897_20833967_20834048_20851664_20851705_20852228
ENSMUST00000136451.8	chrX	+	2439	17	FSM	ENSMUSG00000001127.13	ENSMUST00000136451.8	2439	17	0	0	0	0	multi-exon	FALSE	non_canonical	1	1	junction_10	117.256596296328	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCACAGAATTCTGCT	1123	False	NA	1	True	NA	NA	NA	20664052	20726736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723649_20723762_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ENSMUST00000136454.2	chr11	+	635	4	FSM	ENSMUSG00000085628.5	ENSMUST00000136454.2	635	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGGCCTGAGCAGGACAA	NA	False	NA	NA	False	ATTAAA	-16	NA	85125996	85129130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_85126159_85127965_85128074_85128236_85128341_85128869
ENSMUST00000136481.8	chr2	+	3048	21	FSM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_20	98.1260796118952	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAGTTATGTTGGGGCT	2491	False	NA	19	True	ATTAAA	-7	NA	181243108	181297444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263579_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278685_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818_181290939_181291214_181291392_181291889_181292024_181292878_181292971_181294226_181294342_181296628_181296755_181297213
ENSMUST00000136531.2	chr17	-	978	3	FSM	ENSMUSG00000086930.2	ENSMUST00000136531.2	978	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGGAAAGGGTTGTTT	NA	False	NA	-8	True	AATAAA	-18	NA	48012921	48010895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_48011368_48011669_48011793_48012538
ENSMUST00000136587.8	chr11	+	832	3	FSM	ENSMUSG00000020385.17	ENSMUST00000136587.8	832	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	33	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGTTGGAAATAACTCAG	NA	False	NA	NA	False	AAGAAA	-11	NA	51153990	51163191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_51154097_51157997_51158159_51162626
ENSMUST00000136591.8	chr15	-	2060	12	FSM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	0	0	0	0	multi-exon	TRUE	canonical	3	660	junction_1	60.8163473021321	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGCTTCAGTGATTTA	-35	True	NA	-15	True	ATTAAA	-23	NA	10470602	10446841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ENSMUST00000136618.8	chr16	+	1014	9	FSM	ENSMUSG00000022681.16	ENSMUST00000136618.8	1014	9	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	197.353743313878	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTAGATGACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	13637169	13653312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13637301_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ENSMUST00000136628.2	chr2	+	471	2	FSM	ENSMUSG00000074754.5	ENSMUST00000136628.2	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	0	2024	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAGTGTCTTCTTGAAG	NA	False	NA	NA	False	NA	NA	NA	144435973	144437286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144436126_144436967
ENSMUST00000136652.8	chr7	-	756	5	FSM	ENSMUSG00000030615.13	ENSMUST00000136652.8	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	308.308591349641	2351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAACATTAAAATACTT	1666	False	NA	NA	False	AATAAA	-19	NA	90106416	90099907	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_90100144_90100750_90100866_90101936_90102109_90104631_90104728_90106279
ENSMUST00000136661.8	chr14	-	695	6	FSM	ENSMUSG00000021792.16	ENSMUST00000136661.8	695	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	130.026766475215	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGTAAAGAAAATCAAGCT	NA	False	NA	NA	False	AAAAAG	-39	NA	40730223	40716528	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726161_40730155
ENSMUST00000136703.2	chr11	+	766	3	FSM	ENSMUSG00000020372.16	ENSMUST00000136703.2	766	3	0	0	0	0	multi-exon	FALSE	canonical	1	1907	junction_2	2329	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGGGACTTACAGGC	NA	False	NA	NA	False	NA	NA	NA	48691200	48693494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_48691400_48692489_48692662_48693099
ENSMUST00000136757.8	chr7	-	789	4	FSM	ENSMUSG00000035642.17	ENSMUST00000136757.8	789	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	30.4740326617051	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCATTAGCGATCTCAC	NA	False	NA	NA	False	AATAAA	-31	NA	97228704	97199537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97228572
ENSMUST00000136768.8	chr4	-	556	4	FSM	ENSMUSG00000073888.14	ENSMUST00000136768.8	556	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	19.3045763140937	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTCTCTTTTATTTCA	569	False	NA	5	True	AATAAA	-28	NA	41773601	41769466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41769655_41769843_41769977_41771137_41771236_41773464
ENSMUST00000136776.8	chr16	-	2041	14	FSM	ENSMUSG00000003526.13	ENSMUST00000136776.8	2041	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	36.2063448622479	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCTTTCTCTTGGTACC	7032	False	NA	-1	True	AATAAA	-19	NA	17908067	17889589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17908006
ENSMUST00000136800.2	chr18	+	1503	4	FSM	ENSMUSG00000090000.3	ENSMUST00000136800.2	1503	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	763.929461548789	3563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTAAGCGTCTGATTT	NA	False	NA	8	True	AATAAA	-10	NA	77017740	77029301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_77017913_77018319_77018456_77027263_77027366_77028208
ENSMUST00000136801.8	chr4	+	1536	5	FSM	ENSMUSG00000000085.17	ENSMUST00000136801.8	1536	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	26.8735464723211	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTGTCTTTTTAACCAG	NA	False	NA	12	True	AATAAA	-14	NA	120374822	120387381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_120374904_120379651_120379847_120382194_120382261_120385352_120385496_120386330
ENSMUST00000136804.2	chr6	+	855	3	FSM	ENSMUSG00000030335.7	ENSMUST00000136804.2	855	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	333	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCTGCCTCGTTCCTAAG	NA	False	NA	49	True	NA	NA	NA	125168763	125170521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_125169172_125169478_125169590_125170185
ENSMUST00000136810.8	chr11	-	964	5	FSM	ENSMUSG00000020182.17	ENSMUST00000136810.8	964	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	46.0271658914602	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	NA	False	NA	-3	True	AATAAA	-19	NA	11772921	11764102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11772791
ENSMUST00000136872.8	chr2	+	2596	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	0	0	0	0	multi-exon	FALSE	canonical	3	2037	junction_4	251.273534000079	9581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGGTGTGACTTAGTGGT	96	False	NA	NA	False	ATTAAA	-12	NA	90677498	90697154	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUST00000136874.4	chr4	+	2121	14	FSM	ENSMUSG00000073791.14	ENSMUST00000136874.4	2121	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	5.10481846862679	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTGTCTTGTTAATTG	2075	False	NA	NA	False	AATACA	-19	NA	99717736	99769985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_99717792_99719629_99719818_99731496_99731709_99732648_99732736_99735289_99735486_99735908_99736028_99746056_99746199_99754598_99754709_99757733_99757892_99758840_99758975_99761882_99762032_99766776_99766987_99768120_99768229_99769732
ENSMUST00000136893.3	chr11	+	311	1	FSM	ENSMUSG00000024205.8	ENSMUST00000136893.3	311	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTCCCCCAATAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	76492144	76492455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_76492100_76492500
ENSMUST00000136913.2	chr8	-	671	5	FSM	ENSMUSG00000058833.12	ENSMUST00000136913.2	671	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	340.250918441082	2181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTTTCCCATCAGCTC	NA	False	NA	-12	True	AATAAA	-13	NA	70959387	70956948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70957179_70957633_70957711_70958405_70958611_70959146_70959230_70959311
ENSMUST00000136933.8	chr2	-	2413	10	FSM	ENSMUSG00000005882.19	ENSMUST00000136933.8	2413	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	134.914879429061	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCTGGAATGGATGGA	NA	False	NA	-31	True	AATAAA	-20	NA	155771980	155688813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752388_155753660_155753757_155763554_155763648_155771932
ENSMUST00000136937.8	chr3	+	3878	5	FSM	ENSMUSG00000005687.15	ENSMUST00000136937.8	3878	5	0	0	0	0	multi-exon	FALSE	canonical	3	3803	junction_1	91.1564589044572	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTTATGTGTGGCTAT	4977	False	NA	46	True	AATAAA	-14	NA	103079018	103086141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103084736_103085670
ENSMUST00000136976.7	chr1	-	1845	12	FSM	ENSMUSG00000013593.13	ENSMUST00000136976.7	1845	12	0	0	0	0	multi-exon	FALSE	canonical	3	1142	junction_11	112.190068946623	2714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTAATGTGTCTTTCTT	NA	False	NA	-1	True	ATTAAA	-28	NA	171074691	171062421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
ENSMUST00000136992.8	chr4	+	876	6	FSM	ENSMUSG00000086587.8	ENSMUST00000136992.8	876	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	12.687001221723	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATGGTACAGAATTTTT	0	True	NA	6	True	TATAAA	-17	NA	14930660	14953030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_14930771_14936440_14936540_14938483_14938558_14942199_14942276_14947438_14947546_14952620
ENSMUST00000137050.8	chr2	-	4080	27	FSM	ENSMUSG00000027185.16	ENSMUST00000137050.8	4080	27	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_26	71.9563065976263	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591586	103551604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103591393
ENSMUST00000137116.3	chr15	+	2921	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	13	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTTTAATAATAGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51740824	51748010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_51741107_51744411_51744587_51745546
ENSMUST00000137170.3	chr12	+	2270	6	FSM	ENSMUSG00000085793.4	ENSMUST00000137170.4	2270	6	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	15.7810012356631	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCCAGGTTTTCCTTG	NA	False	NA	5	True	AATAAA	-16	NA	84498195	84578347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509227_84576463
ENSMUST00000137304.8	chr11	-	1271	6	FSM	ENSMUSG00000020743.16	ENSMUST00000137304.8	1271	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	137.166468205608	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503753	115498743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500416_115502728_115502861_115503610
ENSMUST00000137318.2	chr6	-	424	2	FSM	ENSMUSG00000072772.4	ENSMUST00000137318.2	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	807	junction_1	0	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCTTTGTGTCAGTCAT	9602	False	NA	NA	False	AATAAA	-13	NA	124717678	124716149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124716377_124717481
ENSMUST00000137343.9	chr4	+	1416	2	FSM	ENSMUSG00000086290.10	ENSMUST00000137343.9	1416	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCTTTTTTATTTATT	NA	False	NA	25	True	AATAAA	-14	NA	132035987	132038333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132036219_132037148
ENSMUST00000137376.8	chr2	+	1043	7	FSM	ENSMUSG00000062647.17	ENSMUST00000137376.8	1043	7	0	0	0	0	multi-exon	FALSE	canonical	3	2861	junction_1	784.717234989068	72138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGGTTATTTGGGT	NA	False	NA	6	True	AATATA	-19	NA	26800832	26803330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26803070_26803176
ENSMUST00000137398.8	chr5	-	906	5	FSM	ENSMUSG00000085271.8	ENSMUST00000137398.8	906	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.76662979332984	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGCAAAATACTGGAGC	NA	False	NA	NA	False	AATAAA	-31	NA	111909569	111882149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_111882676_111886992_111887080_111887701_111887776_111895707_111895859_111909501
ENSMUST00000137400.8	chr18	+	444	5	FSM	ENSMUSG00000024608.12	ENSMUST00000137400.8	444	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11701.1630698619	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTCGAAGAAAAGGGGGT	NA	False	NA	-21	True	NA	NA	NA	60908787	60911529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_60908815_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUST00000137423.2	chr4	-	353	2	FSM	ENSMUSG00000047675.16	ENSMUST00000137423.2	353	2	0	0	0	0	multi-exon	FALSE	canonical	3	13045	junction_1	0	4954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTAGGTGTTTGGAG	NA	False	NA	-20	True	AATAAA	-23	NA	117011694	117011030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117011185_117011495
ENSMUST00000137510.8	chr11	+	1846	3	FSM	ENSMUSG00000083844.9	ENSMUST00000137510.8	1846	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	16.5	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTGTTGTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	5712128	5731876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_5712241_5715508_5715572_5730205
ENSMUST00000137641.8	chrX	+	3780	7	FSM	ENSMUSG00000073125.11	ENSMUST00000137641.8	3780	7	0	0	0	0	multi-exon	FALSE	canonical	3	979	junction_3	266.969203384127	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235812	72246536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72241992_72243351_72243451_72245455_72245552_72245645
ENSMUST00000137672.3	chr17	-	2167	8	FSM	ENSMUSG00000036775.14	ENSMUST00000137672.3	2167	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	63.645061690213	1576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCTTGTGTTTCCTGTC	NA	False	NA	-1	True	NA	NA	NA	26309303	26300181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26307902_26307972_26308937
ENSMUST00000137699.3	chr5	+	838	6	FSM	ENSMUSG00000039682.13	ENSMUST00000137699.3	838	6	0	0	0	0	multi-exon	FALSE	canonical	3	2266	junction_5	195.982039993465	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCACTGTGGGCAGTGCC	NA	False	NA	NA	False	NA	NA	NA	45650845	45658087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744
ENSMUST00000137712.9	chrX	-	2410	22	FSM	ENSMUSG00000025665.17	ENSMUST00000137712.9	2410	22	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_21	75.5102672059551	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGTGCTCTTCAGTC	NA	False	NA	NA	False	AAAAAG	-22	NA	110372802	110299476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110372546
ENSMUST00000137745.2	chr16	+	515	3	FSM	ENSMUSG00000014232.15	ENSMUST00000137745.2	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	17.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGCTCTTTCGGAGTC	3308	False	NA	NA	False	AATAAA	-14	NA	3726902	3731436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_3727018_3729314_3729427_3731148
ENSMUST00000137799.2	chr3	-	4147	7	FSM	ENSMUSG00000019338.14	ENSMUST00000137799.2	4147	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	51.6225618202825	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCATTCAGGCTTTTCTT	NA	False	NA	-6	True	ATTAAA	-17	NA	94922748	94914147	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94917354_94917534_94917655_94919788_94922630
ENSMUST00000137811.8	chr16	+	639	5	FSM	ENSMUSG00000098274.8	ENSMUST00000137811.8	639	5	0	0	0	0	multi-exon	FALSE	canonical	3	12575	junction_2	609.402371180159	69991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	55786783	55791798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791673
ENSMUST00000137829.8	chr11	+	677	4	FSM	ENSMUSG00000071866.13	ENSMUST00000137829.8	677	4	0	0	0	0	multi-exon	FALSE	canonical	3	36680	junction_3	786.740674484858	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGCGTCCCTACCCCAT	NA	False	NA	NA	False	NA	NA	NA	6365875	6369663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_6365980_6368100_6368315_6369112_6369286_6369477
ENSMUST00000137880.2	chr2	+	689	2	FSM	ENSMUSG00000055612.16	ENSMUST00000137880.2	689	2	0	0	0	0	multi-exon	FALSE	canonical	3	1220	junction_1	0	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCACAAAGGGCCGGAAAC	NA	False	NA	NA	False	TTTAAA	-13	NA	72315450	72316546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_72315657_72316063
ENSMUST00000137953.8	chr8	+	3647	15	FSM	ENSMUSG00000001909.17	ENSMUST00000137953.8	3647	15	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	120.800814296485	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTGCATGGGGGAC	NA	False	NA	36	True	AATAAA	-36	NA	85415911	85426437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85415979_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUST00000137975.2	chr3	+	441	1	FSM	ENSMUSG00000042737.10	ENSMUST00000137975.2	441	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3791	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTAGTTTTGAGTAT	6864	False	NA	19	True	ATTAAA	-20	NA	89173945	89174386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89173900_89174400
ENSMUST00000138005.2	chr7	+	1709	2	FSM	ENSMUSG00000047084.9	ENSMUST00000138005.2	1709	2	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	0	2018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTTGCTTGGTTCTCT	NA	False	NA	13	True	AATAAA	-13	NA	79910967	79915122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79911680_79914125
ENSMUST00000138054.2	chr16	+	659	7	FSM	ENSMUSG00000053062.17	ENSMUST00000138054.2	659	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	1434.94432722048	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	729	False	NA	-10	True	ATTAAA	-17	NA	84606294	84619774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615645_84615664_84618147_84618191_84619674
ENSMUST00000138101.2	chr5	+	1112	8	FSM	ENSMUSG00000019179.11	ENSMUST00000138101.2	1112	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1734.66520912685	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATTTCCTTTTCCATCA	635	False	NA	45	True	AGTAAA	-32	NA	135807515	135819252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135807656_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ENSMUST00000138141.8	chr7	-	2152	13	FSM	ENSMUSG00000030741.16	ENSMUST00000138141.8	2152	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	168.693735476125	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976583	125969238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973146_125973372_125973452_125974238_125974376_125975845_125975912_125976008
ENSMUST00000138147.2	chr11	-	875	3	FSM	ENSMUSG00000020925.17	ENSMUST00000138147.2	875	3	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_2	39	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAATCTCGTGCAAGAC	NA	False	NA	NA	False	NA	NA	NA	102588496	102580535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102581163_102582936_102583025_102588336
ENSMUST00000138149.2	chrX	+	2384	8	FSM	ENSMUSG00000073125.11	ENSMUST00000138149.2	2384	8	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	448.163508791429	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72235816	72246535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72235856_72237775_72237898_72238605_72238676_72239547_72239583_72240958_72241992_72243351_72243451_72245455_72245552_72245645
ENSMUST00000138151.8	chr10	+	1548	9	FSM	ENSMUSG00000015757.11	ENSMUST00000138151.8	1548	9	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_8	31.4779188479798	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGGAAAGGAAAAGGTAT	1139	False	NA	12	True	NA	NA	NA	7668671	7683130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034
ENSMUST00000138162.2	chrX	-	2717	11	FSM	ENSMUSG00000031297.15	ENSMUST00000138162.2	2717	11	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_10	85.0282306060758	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACCTGTCCTGTTCTT	NA	False	NA	NA	False	ATTAAA	-23	NA	100129011	100122815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ENSMUST00000138189.2	chr2	-	765	5	FSM	ENSMUSG00000009549.15	ENSMUST00000138189.2	765	5	0	0	0	0	multi-exon	FALSE	canonical	2	110	junction_4	586.489130334058	4551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTATCCTACAGGTGGTT	NA	False	NA	-13	True	ATTAAA	-5	NA	118310129	118306341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310030
ENSMUST00000138214.2	chr2	+	908	4	FSM	ENSMUSG00000053746.9	ENSMUST00000138214.2	908	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	3.85861230093008	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGCCACATCAGTCTGT	8270	False	NA	NA	False	NA	NA	NA	32665876	32667461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_32665908_32666315_32666819_32666994_32667041_32667133
ENSMUST00000138226.8	chr9	+	835	7	FSM	ENSMUSG00000032249.15	ENSMUST00000138226.8	835	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	200.326954973336	2576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTTTTCTGATTGTA	NA	False	NA	NA	False	NA	NA	NA	62248574	62284983	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_62248634_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
ENSMUST00000138231.2	chr2	-	1208	2	FSM	ENSMUSG00000027079.16	ENSMUST00000138231.2	1208	2	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTATGATTCTTTTT	NA	False	NA	-23	True	AATAAA	-15	NA	84557620	84553467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_84554562_84557506
ENSMUST00000138242.2	chrX	+	1918	11	FSM	ENSMUSG00000001962.9	ENSMUST00000138242.2	1918	11	0	0	0	0	multi-exon	FALSE	canonical	3	747	junction_4	53.8995361761119	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGTGCCTGCATTATA	292	False	NA	NA	False	AATAAA	-18	NA	73356731	73363740	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73356932_73358282_73358368_73358469_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362705_73362796_73362868_73362997_73363109_73363565
ENSMUST00000138304.8	chr8	+	2307	4	FSM	ENSMUSG00000052446.18	ENSMUST00000138304.8	2307	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	188.733203814862	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACCTGGTTCCACTTT	NA	False	NA	NA	False	NA	NA	NA	72704909	72723770	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_72705005_72719637_72719761_72719943_72720005_72721742
ENSMUST00000138337.8	chr4	-	552	4	FSM	ENSMUSG00000073888.14	ENSMUST00000138337.8	552	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	40.1192666378083	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTCTCTTTTATTTCA	633	False	NA	5	True	AATAAA	-28	NA	41773537	41769466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41769655_41769843_41769977_41771137_41771296_41773464
ENSMUST00000138401.2	chr13	-	1946	5	FSM	ENSMUSG00000021377.16	ENSMUST00000138401.2	1946	5	0	0	0	0	multi-exon	FALSE	canonical	3	1428	junction_1	73.852894323784	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTAATCTTTGTCTGCT	NA	False	NA	-8	True	AATAAA	-27	NA	47251914	47238250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630
ENSMUST00000138412.2	chr11	-	327	3	FSM	ENSMUSG00000018585.10	ENSMUST00000138412.2	327	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	1312.5	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAAGTGTCTGGTGTAT	NA	False	NA	-10	True	AATAAA	-17	NA	55352023	55337469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_55337611_55345706_55345783_55351913
ENSMUST00000138414.2	chr2	+	624	2	FSM	ENSMUSG00000017861.12	ENSMUST00000138414.2	624	2	0	0	0	0	multi-exon	FALSE	canonical	3	3118	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCAGGAGTCATGGTTGC	NA	False	NA	NA	False	NA	NA	NA	162910131	162915063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_162910236_162914543
ENSMUST00000138454.2	chr8	+	637	2	FSM	ENSMUSG00000065952.14	ENSMUST00000138454.2	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTGTGTATGTGC	NA	False	NA	NA	False	NA	NA	NA	3617989	3623650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_3618097_3623120
ENSMUST00000138457.2	chr11	-	995	2	FSM	ENSMUSG00000020775.14	ENSMUST00000138457.2	995	2	0	0	0	0	multi-exon	FALSE	canonical	3	763	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTGGTGCCCCATCTCC	410	False	NA	NA	False	NA	NA	NA	116029691	116028607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116029448_116029536
ENSMUST00000138548.2	chr8	+	1287	6	FSM	ENSMUSG00000031570.18	ENSMUST00000138548.2	1287	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	27.7877670927334	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGTGTGTGTGAGT	NA	False	NA	17	True	AATAAA	-29	NA	26210482	26214914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_26210511_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
ENSMUST00000138567.9	chr4	+	1350	5	FSM	ENSMUSG00000045751.17	ENSMUST00000138567.9	1350	5	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	29.9457843443781	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTCATTCTCGTTGAT	-5	True	NA	9	True	AATAAA	-18	NA	24496461	24503413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931
ENSMUST00000138598.8	chr17	+	3250	3	FSM	ENSMUSG00000000579.15	ENSMUST00000138598.8	3250	3	0	0	0	0	multi-exon	FALSE	canonical	3	5304	junction_1	1594.5	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGGTGTGTGTCAAACAC	NA	False	NA	NA	False	NA	NA	NA	6869190	6877173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_6869236_6870885_6870928_6874010
ENSMUST00000138603.9	chr11	-	3316	12	FSM	ENSMUSG00000006930.16	ENSMUST00000138603.9	3316	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	156.163931667075	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2007	False	NA	-2	True	AATAAA	-17	NA	100246954	100238152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100239686_100240062_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ENSMUST00000138621.2	chr5	+	565	2	FSM	ENSMUSG00000029614.14	ENSMUST00000138621.2	565	2	0	0	0	0	multi-exon	FALSE	canonical	3	16758	junction_1	0	5477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTCCTTTTTGTG	NA	False	NA	1	True	ATTAAA	-15	NA	121346258	121347029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_121346639_121346844
ENSMUST00000138666.8	chr2	+	534	7	FSM	ENSMUSG00000052533.15	ENSMUST00000138666.8	534	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	552.74607390937	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGTTTCTTGTGTATA	4875	False	NA	NA	False	TTTAAA	-1	NA	30176435	30193822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192016_30192058_30193671
ENSMUST00000138688.2	chr8	-	1441	7	FSM	ENSMUSG00000057788.14	ENSMUST00000138688.2	1441	7	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_3	14.1705876926667	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACACAAAAGAAG	9957	False	NA	NA	False	NA	NA	NA	70755113	70748469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
ENSMUST00000138728.2	chr17	-	785	4	FSM	ENSMUSG00000062753.15	ENSMUST00000138728.2	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_3	19.7371617907833	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTGCCCTCCTTGGGT	NA	False	NA	45	True	AATAAA	-14	NA	27784723	27782746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27782991_27783122_27783385_27783535_27783725_27784633
ENSMUST00000138746.8	chr7	-	3496	26	FSM	ENSMUSG00000038644.15	ENSMUST00000138746.8	3496	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	370.873507277077	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198273	44182174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191834_44192188_44192303_44192664_44192861_44198178
ENSMUST00000138759.8	chr17	-	1074	8	FSM	ENSMUSG00000061046.10	ENSMUST00000138759.8	1074	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	17.2496672549984	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTGGTACCAGACACAC	4359	False	NA	-35	True	AATAAA	-14	NA	26004541	26001796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26004401
ENSMUST00000138800.8	chr2	+	771	3	FSM	ENSMUSG00000016344.15	ENSMUST00000138800.8	771	3	0	0	0	0	multi-exon	FALSE	canonical	3	861	junction_2	3.5	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGTATGTTTGAAAC	3625	False	NA	1	True	AATAAA	-17	NA	180829328	180830297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180829680_180829796_180829894_180829974
ENSMUST00000138823.8	chr6	-	1905	16	FSM	ENSMUSG00000029782.21	ENSMUST00000138823.8	1905	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	247.567903143091	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTGTGTCACGTGTTCC	4	True	NA	NA	False	ATTAAA	-37	NA	30509715	30481020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_30481137_30482855_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ENSMUST00000138843.8	chr15	-	4415	16	FSM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	0	0	0	0	multi-exon	FALSE	canonical	1	68	junction_8	31.7016648704063	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGGACACACTTTAAGT	NA	False	NA	80	True	AATAAA	-19	NA	100320883	100290443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ENSMUST00000138889.8	chr2	+	1192	4	FSM	ENSMUSG00000026857.10	ENSMUST00000138889.8	1192	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	216.499422632025	1414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGCCCCAGGCAGTCT	NA	False	NA	11	True	AATAAA	-17	NA	30697952	30713029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30698096_30709640_30709781_30710460_30710714_30712373
ENSMUST00000138918.8	chrX	-	2658	7	FSM	ENSMUSG00000041096.14	ENSMUST00000138918.8	2658	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	79.0400742239867	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGAGTCTTTTGTCC	NA	False	NA	-1	True	AATAAA	-20	NA	151125421	151119847	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_151120562_151121720_151122062_151122210_151122392_151122628_151122724_151122857_151123004_151123081_151123377_151124535
ENSMUST00000138944.8	chrX	-	1275	3	FSM	ENSMUSG00000025283.16	ENSMUST00000138944.8	1275	3	0	0	0	0	multi-exon	FALSE	canonical	3	1003	junction_1	88	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTTGAACATCTTTTG	NA	False	NA	NA	False	TTTAAA	-30	NA	153997900	153996301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_153996664_153996892_153996934_153997028
ENSMUST00000139085.2	chr11	+	953	2	FSM	ENSMUSG00000070394.11	ENSMUST00000139085.2	953	2	0	0	0	0	multi-exon	FALSE	canonical	3	1529	junction_1	0	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTTTGGTGTCTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	69729388	69730438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69730095_69730191
ENSMUST00000139091.2	chr10	+	600	3	FSM	ENSMUSG00000025408.16	ENSMUST00000139091.2	600	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	357	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGTCAGCCTGCACCAA	NA	False	NA	NA	False	NA	NA	NA	127126661	127131934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127126761_127131189_127131348_127131591
ENSMUST00000139101.2	chr16	+	336	2	FSM	ENSMUSG00000008976.17	ENSMUST00000139101.2	336	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCAAATCCTTAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	84656932	84659353	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_84657035_84659119
ENSMUST00000139105.8	chrX	-	551	4	FSM	ENSMUSG00000031388.15	ENSMUST00000139105.8	551	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	475.546702929025	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGGGTATGCTTTTTTT	NA	False	NA	-1	True	AATAAA	-38	NA	72963468	72960478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72960797_72961448_72961534_72963107_72963147_72963359
ENSMUST00000139108.8	chr2	-	2167	10	FSM	ENSMUSG00000026958.14	ENSMUST00000139108.8	2167	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	80.8125402809902	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGCATGGAAGGATGAG	9015	False	NA	-3	True	AATAAA	-31	NA	25246357	25242287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245734_25245825_25246155_25246242
ENSMUST00000139121.8	chr7	+	427	4	FSM	ENSMUSG00000042831.14	ENSMUST00000139121.8	427	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	198.031983948721	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGCTTGTG	NA	False	NA	NA	False	AATAAA	-39	NA	30008237	30010475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30010218
ENSMUST00000139132.2	chr6	+	1060	6	FSM	ENSMUSG00000029763.18	ENSMUST00000139132.2	1060	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	51.1640498787967	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTTTAATCTTTTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	33226070	33296331	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33296054
ENSMUST00000139167.3	chr5	-	1797	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	3.5	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGCTGATTTTTTAC	9709	False	NA	-1	True	NA	NA	NA	115479237	115471297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_115472654_115473525_115473630_115478900
ENSMUST00000139192.8	chr7	-	3286	7	FSM	ENSMUSG00000030929.18	ENSMUST00000139192.8	3286	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	33.8854278742681	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACATGTAGAACATCAGA	NA	False	NA	-17	True	AATAAA	-19	NA	119393182	119383066	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_119385768_119385961_119386051_119386956_119387058_119389456_119389614_119390323_119390452_119391653_119391722_119393140
ENSMUST00000139253.8	chr2	+	3056	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	0	0	0	0	multi-exon	FALSE	canonical	3	5931	junction_1	722	33858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTTCAGTGAGTCCTGG	NA	False	NA	NA	False	AATAAA	-14	NA	121279675	121283901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121279923_121280455_121280565_121281201
ENSMUST00000139263.8	chr2	-	2036	17	FSM	ENSMUSG00000027639.17	ENSMUST00000139263.8	2036	17	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	54.3495630157226	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAATATCTGCGGTTAG	NA	False	NA	-5	True	AGTAAA	-18	NA	156977040	156941320	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_156941424_156943240_156943364_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ENSMUST00000139332.2	chr4	-	2558	4	FSM	ENSMUSG00000028540.7	ENSMUST00000139332.2	2558	4	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_1	7.78888096369861	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCTTTATTCAC	NA	False	NA	-7	True	AATAAA	-15	NA	117749217	117746103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117746874_117746951_117748316_117748511_117748625_117748906
ENSMUST00000139349.3	chr7	+	1248	5	FSM	ENSMUSG00000012848.16	ENSMUST00000139349.3	1248	5	0	0	0	0	multi-exon	FALSE	canonical	3	14799	junction_4	1606.02496478106	2187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTCCTGTGTGCTTGTC	NA	False	NA	36	True	AATAAA	-22	NA	12656257	12660611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12660422_12660498
ENSMUST00000139398.8	chr5	-	1663	5	FSM	ENSMUSG00000029433.17	ENSMUST00000139398.8	1663	5	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_2	57.6649807075317	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTTTTCAGAATTGTT	8956	False	NA	-12	True	AATAAA	-25	NA	123662205	123649767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_123650771_123655799_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUST00000139430.2	chr11	-	608	3	FSM	ENSMUSG00000020457.14	ENSMUST00000139430.2	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	1911	junction_1	72.5	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGGCTGGCTTTGAAC	487	False	NA	NA	False	NA	NA	NA	3202859	3200096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_3200366_3202159_3202283_3202643
ENSMUST00000139443.8	chr5	-	923	4	FSM	ENSMUSG00000066551.13	ENSMUST00000139443.8	923	4	0	0	0	0	multi-exon	FALSE	canonical	3	5649	junction_3	1332.80464518331	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTAAACTTTAAGCTTG	6793	False	NA	NA	False	AATAAA	-2	NA	148989821	148986210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_148986712_148987104_148987251_148987397_148987562_148989709
ENSMUST00000139489.8	chr3	+	2717	6	FSM	ENSMUSG00000005687.15	ENSMUST00000139489.8	2717	6	0	0	0	0	multi-exon	FALSE	canonical	3	3472	junction_4	182.433111029769	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATGTGTGGCTATAG	5023	False	NA	48	True	AATAAA	-16	NA	103079064	103086143	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103084736_103085670
ENSMUST00000139490.8	chr2	-	307	3	FSM	ENSMUSG00000040591.19	ENSMUST00000139490.8	307	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	64	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTTCTTTTTTCTTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	91274982	91249128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_91249264_91252210_91252314_91274913
ENSMUST00000139493.8	chr11	-	941	4	FSM	ENSMUSG00000087060.8	ENSMUST00000139493.8	941	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	8.73053390247253	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGAAGGTGTATCGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	16901118	16885158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_16885842_16886454_16886565_16900881_16900931_16901019
ENSMUST00000139517.9	chr15	+	2997	22	FSM	ENSMUSG00000042303.20	ENSMUST00000139517.9	2997	22	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_4	14.7956603308487	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTGTTTTATTTTAA	NA	False	NA	7	True	AATACA	-17	NA	80861965	80896491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ENSMUST00000139538.9	chr18	+	2829	5	FSM	ENSMUSG00000024516.14	ENSMUST00000139538.9	2829	5	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	12.6565200588471	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTGTGGCCTCTGA	NA	False	NA	NA	False	AATAAA	-21	NA	65933620	65950736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_65933783_65942515_65942626_65945735_65948029_65949891_65949950_65950530
ENSMUST00000139560.8	chr4	+	4584	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107224980	107273543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ENSMUST00000139562.8	chr1	+	881	4	FSM	ENSMUSG00000073633.10	ENSMUST00000139562.8	881	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	23.5843639350783	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTCTGGTTTGTAAT	4244	False	NA	NA	False	AATAAA	-15	NA	84844156	84878208	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_84844265_84858812_84858922_84874210_84874384_84877717
ENSMUST00000139584.2	chr16	-	987	7	FSM	ENSMUSG00000022544.15	ENSMUST00000139584.2	987	7	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_1	22.2517165380311	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTTCTCTTTCTGTGG	NA	False	NA	-2	True	NA	NA	NA	5073820	5065238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ENSMUST00000139612.2	chr6	+	899	2	FSM	ENSMUSG00000086013.2	ENSMUST00000139612.2	899	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTGAGGATTCTGACT	NA	False	NA	6	True	NA	NA	NA	145196254	145197575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_145196516_145196937
ENSMUST00000139613.2	chr7	+	285	2	FSM	ENSMUSG00000030672.13	ENSMUST00000139613.2	285	2	0	0	0	0	multi-exon	FALSE	canonical	3	1768	junction_1	0	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGCAATTTCAGTGT	391	False	NA	31	True	AATAAA	-23	NA	126813067	126813459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_126813156_126813262
ENSMUST00000139673.8	chr2	+	4241	14	FSM	ENSMUSG00000039463.15	ENSMUST00000139673.8	4241	14	0	0	0	0	multi-exon	FALSE	non_canonical	1	2	junction_5	41.4961322785973	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167263661	167318919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ENSMUST00000139685.8	chr4	-	2051	4	Antisense	novelGene_ENSMUSG00000028936.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	112135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGAGGGGGGCGCACTA	276	False	NA	NA	False	NA	NA	NA	152418528	152410323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr4_-_152410353_152411937_152412043_152414460_152414586_152416736
ENSMUST00000139715.8	chr1	+	2518	21	FSM	ENSMUSG00000026229.18	ENSMUST00000139715.8	2518	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	342.245102229382	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	30	True	NA	NA	NA	85992340	86060471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_85992528_85998304_85998349_85999335_85999410_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435
ENSMUST00000139718.10	chr19	+	1012	5	FSM	ENSMUSG00000024845.20	ENSMUST00000139718.10	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_3	207.505421615918	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAAGGACAGTTGCACTT	4370	False	NA	NA	False	AATAAA	-15	NA	4175958	4181725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4176200_4177055_4177121_4177548_4177836_4181227_4181282_4181360
ENSMUST00000139721.8	chr8	+	1993	9	FSM	ENSMUSG00000008167.15	ENSMUST00000139721.8	1993	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	8.18535277187245	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGAGCTTTCTGTGAC	NA	False	NA	25	True	AATAAA	-25	NA	85786684	85793753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
ENSMUST00000139731.8	chr11	-	2131	9	FSM	ENSMUSG00000020832.15	ENSMUST00000139731.8	2131	9	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_7	16.6466025062173	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATCTTTTATTTCTTT	NA	False	NA	-2	True	AATAAA	-22	NA	77971209	77964201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_77965001_77965105_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
ENSMUST00000139743.8	chr10	-	679	5	FSM	ENSMUSG00000051736.9	ENSMUST00000139743.8	679	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	11.5190060335083	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGTTGACTCTTCCAT	NA	False	NA	-6	True	AATAAA	-25	NA	39009896	38994803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_38995031_38996253_38996393_38998172_38998332_39008242_39008375_39009874
ENSMUST00000139754.8	chr17	-	1575	7	FSM	ENSMUSG00000073436.12	ENSMUST00000139754.8	1575	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	12.9185482500507	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTGGGCATTTGTGAA	1892	False	NA	NA	False	GATAAA	-13	NA	25114033	25111128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113730_25113828
ENSMUST00000139782.8	chr8	-	1366	10	FSM	ENSMUSG00000031816.16	ENSMUST00000139782.8	1366	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	24.8282992660481	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTTGTATGTTTGTG	NA	False	NA	-11	True	NA	NA	NA	121835049	121824295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_121824665_121825446_121825511_121825737_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121834932
ENSMUST00000139829.2	chr11	-	796	4	FSM	ENSMUSG00000078640.10	ENSMUST00000139829.2	796	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.16024689946929	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAAACTATTTTCATAT	4	True	NA	NA	False	NA	NA	NA	102470101	102467269	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102467624_102467724_102467906_102469575_102469722_102469986
ENSMUST00000139846.2	chr11	+	447	3	FSM	ENSMUSG00000035530.14	ENSMUST00000139846.2	447	3	0	0	0	0	multi-exon	FALSE	canonical	3	12221	junction_1	273.5	2944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGTTTTAAGTGCTTGT	4590	False	NA	NA	False	NA	NA	NA	100211343	100212175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_100211656_100211773_100211876_100212142
ENSMUST00000139853.2	chr5	-	2408	16	FSM	ENSMUSG00000041740.17	ENSMUST00000139853.2	2408	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	390.381500017042	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTTGAGCCGCCTTCCC	NA	False	NA	-29	True	AATAAA	-11	NA	115410360	115379837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_115380121_115380451_115380611_115380692_115380751_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ENSMUST00000139934.8	chr11	+	865	6	FSM	ENSMUSG00000020812.19	ENSMUST00000139934.8	865	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	27.7632851082144	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	3	True	AATAAA	-16	NA	116562485	116566624	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125_116565202_116566333
ENSMUST00000139947.8	chr7	-	2411	16	FSM	ENSMUSG00000038520.16	ENSMUST00000139947.8	2411	16	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_3	26.7432234407148	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCACGGTGTAGTGTTCA	7867	False	NA	NA	False	NA	NA	NA	44498335	44490324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44490845_44490966_44491054_44491406_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ENSMUST00000139959.8	chr11	+	1542	7	FSM	ENSMUSG00000020372.16	ENSMUST00000139959.8	1542	7	0	0	0	0	multi-exon	FALSE	canonical	3	5433	junction_6	484.72730019626	4702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTATATGTGAGTC	NA	False	NA	23	True	AATAAA	-15	NA	48691183	48696915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_48691400_48692489_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUST00000139971.8	chr2	-	3017	8	FSM	ENSMUSG00000026958.14	ENSMUST00000139971.8	3017	8	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_5	30.9073665348966	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAGTAGGATCCATGCAT	9029	False	NA	-14	True	AATAAA	-20	NA	25246343	25242298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_25242579_25242697_25242769_25243164_25244306_25244479_25244647_25244752_25244835_25244904_25245966_25246040_25246155_25246242
ENSMUST00000139990.8	chr7	-	2549	7	FSM	ENSMUSG00000025722.17	ENSMUST00000139990.8	2549	7	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_4	7.94599829404014	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTGTGTGTATGAG	NA	False	NA	-4	True	AATAAA	-15	NA	80550980	80540471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391
ENSMUST00000140025.8	chr7	+	3341	20	FSM	ENSMUSG00000025504.15	ENSMUST00000140025.8	3341	20	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	10.3329610036278	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGATATCTGTTTCTTGG	NA	False	NA	7	True	AATAAA	-19	NA	140918868	140942933	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ENSMUST00000140028.8	chr5	-	287	2	FSM	ENSMUSG00000072591.11	ENSMUST00000140028.8	287	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTCTGTCCTTCCAGAT	NA	False	NA	NA	False	AATAAA	-36	NA	128662442	128656169	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_128656350_128662335
ENSMUST00000140053.3	chr7	-	1244	11	FSM	ENSMUSG00000030603.17	ENSMUST00000140053.3	1244	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	702.157133411034	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGGATTGGTTTAGT	NA	False	NA	-54	True	NA	NA	NA	27749473	27741181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748312_27748528_27748628_27749407
ENSMUST00000140076.2	chr5	-	3981	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	1878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATGTGTGCATTTTAA	NA	False	NA	49	True	AATAAA	-3	NA	77099425	77061122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ENSMUST00000140089.7	chr4	+	578	4	FSM	ENSMUSG00000056300.15	ENSMUST00000140089.7	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	159.826989794173	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTTTAAAGGGGTCTT	NA	False	NA	NA	False	TATAAA	-9	NA	146599376	146621477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_146599500_146616526_146616611_146619877_146620005_146621233
ENSMUST00000140114.3	chr14	+	419	2	FSM	ENSMUSG00000055128.16	ENSMUST00000140114.3	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGTAGACGTGAAGATGA	631	False	NA	NA	False	ATTAAA	-23	NA	47069675	47077871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_47069837_47077613
ENSMUST00000140155.2	chr5	-	441	1	FSM	ENSMUSG00000060419.9	ENSMUST00000140155.2	441	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5011	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATCTCAAGGATCGGGG	NA	False	NA	NA	False	NA	NA	NA	129205581	129205140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_129205100_129205600
ENSMUST00000140178.2	chr14	+	2817	20	FSM	ENSMUSG00000047098.19	ENSMUST00000140178.2	2817	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	48.3695378142654	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTAGGCTTCTTGGTGG	4741	False	NA	9	True	AATAAA	-12	NA	55829731	55841121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833631_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ENSMUST00000140226.2	chr4	-	1120	3	FSM	ENSMUSG00000047675.16	ENSMUST00000140226.2	1120	3	0	0	0	0	multi-exon	FALSE	canonical	3	8358	junction_2	2777.5	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAATTCAAAAGAAAT	NA	False	NA	NA	False	TTTAAA	-13	NA	117013281	117011587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117012011_117012204_117012875_117013254
ENSMUST00000140254.8	chr10	+	2038	7	FSM	ENSMUSG00000006728.13	ENSMUST00000140254.8	2038	7	0	0	0	0	multi-exon	FALSE	canonical	3	4641	junction_3	424.742274797318	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTAATGTTTTTTC	NA	False	NA	29	True	AAAACA	-27	NA	126899482	126903166	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901873_126901969_126902106_126902797
ENSMUST00000140265.8	chr9	+	791	6	FSM	ENSMUSG00000033543.18	ENSMUST00000140265.8	791	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	407.297728940391	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919924	69930020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69924354_69924474_69926670_69926798_69929718
ENSMUST00000140267.10	chr19	+	938	7	FSM	ENSMUSG00000024845.20	ENSMUST00000140267.10	938	7	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_2	70.8411760364142	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4370	False	NA	NA	False	AATAAA	-16	NA	4175958	4181726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
ENSMUST00000140281.2	chr6	-	455	4	FSM	ENSMUSG00000030042.16	ENSMUST00000140281.2	455	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	461.738983505713	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATTCAAGCCTGGATGT	NA	False	NA	NA	False	NA	NA	NA	82629499	82624823	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629365
ENSMUST00000140291.2	chr4	-	722	4	FSM	ENSMUSG00000057236.11	ENSMUST00000140291.2	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	460.816666365269	3694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	3218	False	NA	-29	True	AATAAA	-14	NA	129228437	129203309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_129203670_129216594_129216663_129222380_129222527_129228289
ENSMUST00000140322.2	chr4	+	1555	2	FSM	ENSMUSG00000029038.10	ENSMUST00000140322.2	1555	2	0	0	0	0	multi-exon	FALSE	canonical	3	1675	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTGTGGGGAAAGACAG	NA	False	NA	NA	False	AGTAAA	-22	NA	155789580	155801135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155789919_155799918
ENSMUST00000140343.3	chr6	+	655	2	FSM	ENSMUSG00000029993.17	ENSMUST00000140343.3	655	2	0	0	0	0	multi-exon	FALSE	canonical	3	2768	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGTATTGCTTTCTCTG	NA	False	NA	NA	False	AAGAAA	-43	NA	86986870	86990472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_86986942_86989888
ENSMUST00000140375.8	chr9	+	1921	7	FSM	ENSMUSG00000032309.16	ENSMUST00000140375.8	1921	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	472.947759623971	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCAACTGGTGTTGTA	NA	False	NA	2	True	AATAAA	-9	NA	55116271	55131708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125717_55125764_55128305_55128472_55130523
ENSMUST00000140405.10	chr19	+	874	6	FSM	ENSMUSG00000024845.20	ENSMUST00000140405.10	874	6	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	248.896283620306	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4400	False	NA	NA	False	AATAAA	-16	NA	4175988	4181726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4177836_4181227_4181282_4181360
ENSMUST00000140406.8	chr2	-	919	6	FSM	ENSMUSG00000044627.12	ENSMUST00000140406.8	919	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	1714.39027062102	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32177947	32168827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_32169144_32170238_32170523_32170720_32170816_32171697_32171823_32177608_32177658_32177897
ENSMUST00000140420.8	chr3	-	727	4	FSM	ENSMUSG00000040562.13	ENSMUST00000140420.8	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_1	26.59991645768	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGACTTTGTGAGTTG	2074	False	NA	NA	False	NA	NA	NA	107893737	107892376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107892466_107892562_107892645_107892933_107893426_107893673
ENSMUST00000140423.2	chr6	-	1656	2	FSM	ENSMUSG00000072772.4	ENSMUST00000140423.2	1656	2	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGTGTCAGTCATT	9252	False	NA	NA	False	AATAAA	-14	NA	124718028	124716148	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124717659_124717882
ENSMUST00000140521.8	chr8	+	1551	12	FSM	ENSMUSG00000005481.19	ENSMUST00000140521.8	1551	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	911.296107223839	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441896	84449904	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448094_84448154_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUST00000140541.8	chr4	-	2620	14	FSM	ENSMUSG00000034853.17	ENSMUST00000140541.8	2620	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	6.90167632497168	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGACTGGTGACTCTCAG	NA	False	NA	NA	False	NA	NA	NA	106628753	106604587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106628539
ENSMUST00000140548.8	chr11	+	661	6	FSM	ENSMUSG00000001039.13	ENSMUST00000140548.8	661	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	140.442728540854	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCCTTCATTTCTTG	NA	False	NA	23	True	AATAAA	-23	NA	61396028	61403757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_61396098_61397169_61397239_61398453_61398566_61400295_61400359_61403197_61403266_61403477
ENSMUST00000140570.8	chr2	+	3543	13	FSM	ENSMUSG00000033411.17	ENSMUST00000140570.8	3543	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	109.645134664314	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGCTCTTTCTCAAAAT	NA	False	NA	11	True	AATAAA	-21	NA	121786960	121843096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121787099_121799550_121799761_121807815_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ENSMUST00000140575.8	chrX	+	788	4	FSM	ENSMUSG00000086316.9	ENSMUST00000140575.8	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	8.37987005998436	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATGTCCAAATAAATTT	NA	False	NA	9	True	ATTAAA	-14	NA	152506585	152524260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_152506934_152508700_152508838_152511857_152511936_152524035
ENSMUST00000140593.9	chr7	-	2998	12	FSM	ENSMUSG00000030986.14	ENSMUST00000140593.9	2998	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_11	95.5958261822716	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCTCTTCAATGGGTTT	NA	False	NA	-13	True	AATAAA	-15	NA	133361998	133322674	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133361749
ENSMUST00000140621.2	chr8	+	630	4	FSM	ENSMUSG00000059355.14	ENSMUST00000140621.2	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	280.064675070281	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCACTGTTGCTTCTCT	NA	False	NA	29	True	TATAAA	-18	NA	85807616	85808961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85807693_85807801_85807908_85808405_85808504_85808611
ENSMUST00000140659.2	chr5	+	1024	3	FSM	ENSMUSG00000058558.13	ENSMUST00000140659.2	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	7486	junction_1	330	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTGTGTTAAGCTG	NA	False	NA	-2	True	AATAAA	-16	NA	108051979	108055916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108052761_108055054_108055144_108055762
ENSMUST00000140687.2	chr7	-	625	1	FSM	ENSMUSG00000087412.5	ENSMUST00000140687.2	625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42666	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCATGTGTAGTGTAA	NA	False	NA	-60	True	NA	NA	NA	92828852	92828227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_92828200_92828900
ENSMUST00000140751.8	chr12	-	1397	13	FSM	ENSMUSG00000020566.20	ENSMUST00000140751.8	1397	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	8.24073553890805	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTCTTGTGTTCTAAT	NA	False	NA	1	True	AATAAA	-15	NA	17374666	17334722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_17334950_17335113_17335247_17338083_17338182_17341429_17341524_17341628_17341722_17344145_17344215_17344676_17344776_17347729_17347856_17351121_17351217_17358272_17358359_17371598_17371667_17373338_17373512_17374630
ENSMUST00000140763.2	chr2	-	309	1	FSM	ENSMUSG00000087181.4	ENSMUST00000140763.2	309	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGGTGGTGGAGCCAA	NA	False	NA	NA	False	NA	NA	NA	59929058	59928749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_59928700_59929100
ENSMUST00000140879.2	chr5	-	2651	2	FSM	ENSMUSG00000047215.15	ENSMUST00000140879.2	2651	2	0	0	0	0	multi-exon	FALSE	canonical	3	5084	junction_1	0	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTCCTTGTCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	65548741	65545707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65548336_65548718
ENSMUST00000140886.3	chr11	-	478	3	FSM	ENSMUSG00000017288.16	ENSMUST00000140886.3	478	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	39.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAACCAGATGAGTGGT	NA	False	NA	NA	False	AATAAA	-26	NA	76070438	76061339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_76061537_76065452_76065534_76070238
ENSMUST00000140931.2	chr5	-	2369	4	FSM	ENSMUSG00000019295.9	ENSMUST00000140931.2	2369	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	31.3793987620328	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTACTTCATTTTGTTT	NA	False	NA	-2	True	AATAAA	-16	NA	33815243	33810562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814905
ENSMUST00000140950.8	chr2	+	648	5	FSM	ENSMUSG00000027454.11	ENSMUST00000140950.8	648	5	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	29.583568074186	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCGAGAGGAAGACAGTTT	2445	False	NA	NA	False	NA	NA	NA	150751536	150768017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801
ENSMUST00000141049.2	chr17	+	1618	2	FSM	ENSMUSG00000037805.16	ENSMUST00000141049.2	1618	2	0	0	0	0	multi-exon	FALSE	canonical	3	8416	junction_1	0	2111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGCCTTGGTGTGCCTG	NA	False	NA	-5	True	AATAAA	-14	NA	28548251	28550001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_28549672_28549803
ENSMUST00000141125.8	chr1	-	2085	9	FSM	ENSMUSG00000026047.14	ENSMUST00000141125.8	2085	9	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_5	36.3145976158349	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGTTTTGTTACAGTT	NA	False	NA	-5	True	AATAAA	-17	NA	44157913	44146044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ENSMUST00000141128.2	chrX	+	2160	17	FSM	ENSMUSG00000031060.17	ENSMUST00000141128.2	2160	17	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_9	66.2334885084577	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAAAAACAGCTTCCAGC	557	False	NA	NA	False	AAAAAG	-5	NA	20484023	20515435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382
ENSMUST00000141138.8	chr6	-	890	4	FSM	ENSMUSG00000030042.16	ENSMUST00000141138.8	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	458.476462500167	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATGTGATATAAAATTT	NA	False	NA	-36	True	NA	NA	NA	82629501	82624296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629459
ENSMUST00000141217.2	chr1	-	1597	5	FSM	ENSMUSG00000043716.14	ENSMUST00000141217.2	1597	5	0	0	0	0	multi-exon	FALSE	canonical	3	5452	junction_4	739.819403638483	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAATGTGTCGGA	NA	False	NA	-16	True	AATAAA	-14	NA	16174626	16171529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16172161_16172713_16172824_16172915_16173559_16173733_16173909_16174588
ENSMUST00000141262.2	chr2	-	463	4	FSM	ENSMUSG00000040591.19	ENSMUST00000141262.2	463	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.29983164553722	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTTTTGTTGTGTTAG	NA	False	NA	NA	False	ATTAAA	-19	NA	91275049	91249177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_91249264_91252210_91252314_91254906_91255045_91274913
ENSMUST00000141268.8	chr15	-	713	7	FSM	ENSMUSG00000055762.17	ENSMUST00000141268.8	713	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	1405.29918720376	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGCCAAATCCTCCATC	NA	False	NA	NA	False	NA	NA	NA	75781168	75768129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75768314_75768488_75768590_75768668_75768769_75769074_75769132_75772539_75772612_75772980_75773105_75781093
ENSMUST00000141274.2	chr6	-	453	5	FSM	ENSMUSG00000023089.13	ENSMUST00000141274.2	453	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	1535.46725380257	10828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTGTCCATGTTATT	504	False	NA	-32	True	ATTAAA	-26	NA	24527525	24518665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_24518824_24519190_24519257_24522657_24522775_24527271_24527317_24527458
ENSMUST00000141281.4	chr5	-	2201	13	FSM	ENSMUSG00000038593.19	ENSMUST00000141281.4	2201	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	9.19654222460207	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATCCCAAGATTGTGCT	NA	False	NA	NA	False	NA	NA	NA	122402523	122379349	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_122379899_122380668_122380789_122383563_122383727_122384547_122384698_122385982_122386109_122386911_122387047_122388509_122388531_122389674_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
ENSMUST00000141321.2	chr11	+	341	3	FSM	ENSMUSG00000072640.12	ENSMUST00000141321.2	341	3	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	33	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAGTTGAAAACAGAGGC	NA	False	NA	NA	False	NA	NA	NA	78717429	78729082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78717463_78726843_78726985_78728915
ENSMUST00000141377.8	chr3	-	808	4	FSM	ENSMUSG00000028099.9	ENSMUST00000141377.8	808	4	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	11.8415464455544	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTGTGTGCCAGTCAT	NA	False	NA	-1	True	AATGAA	-22	NA	96634770	96630735	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_96631016_96631112_96631369_96633149_96633316_96634664
ENSMUST00000141406.8	chr11	-	864	4	FSM	ENSMUSG00000062825.16	ENSMUST00000141406.8	864	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2992.84327837073	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGTGACATAAAGGAGAAGC	NA	False	NA	NA	False	GGGGCT	-35	NA	120239295	120237912	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120238363_120238461_120238702_120238794_120238924_120239250
ENSMUST00000141441.8	chr2	-	2133	10	FSM	ENSMUSG00000026761.13	ENSMUST00000141441.8	2133	10	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_2	49.1515670473473	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTTTTACTGCAG	NA	False	NA	NA	False	AATAAA	-15	NA	48839246	48801415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ENSMUST00000141470.2	chr2	-	1006	2	FSM	ENSMUSG00000026966.7	ENSMUST00000141470.2	1006	2	0	0	0	0	multi-exon	FALSE	canonical	3	843	junction_1	0	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATCCCCATGGCCTCTGG	NA	False	NA	-53	True	AAGAAA	-32	NA	25162450	25161097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_25161594_25161940
ENSMUST00000141489.2	chr18	-	2207	2	FSM	ENSMUSG00000047989.12	ENSMUST00000141489.2	2207	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGGGTGTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	24255010	24237813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_24239716_24254705
ENSMUST00000141531.8	chr11	-	1503	4	FSM	ENSMUSG00000020773.12	ENSMUST00000141531.8	1503	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	17.6131264181639	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCCCCTTTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	115998945	115996577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115997468_115997757_115997830_115998249_115998449_115998603
ENSMUST00000141542.8	chr10	-	2365	7	FSM	ENSMUSG00000019822.13	ENSMUST00000141542.8	2365	7	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	12.5521135891752	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTAGTGGCTCTACCTTG	NA	False	NA	-6	True	AATAAA	-14	NA	41366326	41363173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364428_41364512_41364729_41365348_41365459
ENSMUST00000141557.8	chr13	-	3502	13	FSM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_6	206.169209766045	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAAGGATCTGAGTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	104314933	104278663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUST00000141592.8	chr5	+	3068	16	FSM	ENSMUSG00000029267.18	ENSMUST00000141592.8	3068	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	689.521263873228	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTTGGAGTATATATCC	NA	False	NA	NA	False	AATACA	-16	NA	108213581	108255490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108213832_108217027_108217390_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUST00000141608.2	chr7	-	502	3	FSM	ENSMUSG00000006095.13	ENSMUST00000141608.2	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	871	junction_1	18	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGTGCAAGTCTCTT	NA	False	NA	-11	True	NA	NA	NA	29926486	29923561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_29923773_29923897_29923971_29926268
ENSMUST00000141629.2	chrX	-	1055	7	FSM	ENSMUSG00000031167.17	ENSMUST00000141629.2	1055	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	540.745601512907	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGGGAGGTAAGCGTG	6561	False	NA	NA	False	AATAAA	-26	NA	8011936	8009266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8009572_8009896_8009991_8010086_8010187_8010413_8010685_8010811_8010919_8011193_8011312_8011876
ENSMUST00000141662.8	chr17	-	2034	11	FSM	ENSMUSG00000024426.18	ENSMUST00000141662.8	2034	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	41.2200194080498	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTCGTTTGTGCTTCA	NA	False	NA	NA	False	AAAACA	-11	NA	36220937	36210708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36211765_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ENSMUST00000141664.9	chr16	-	762	6	FSM	ENSMUSG00000058240.15	ENSMUST00000141664.9	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	1466	junction_2	55.2268050859363	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTATTTGGTTTTTGTT	9203	False	NA	NA	False	TTTAAA	-2	NA	91525488	91503730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUST00000141679.3	chr6	+	1003	2	FSM	ENSMUSG00000045709.12	ENSMUST00000141679.3	1003	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGCTTAGCAGTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	29985233	29993777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_29985466_29993006
ENSMUST00000141683.2	chr10	-	605	3	FSM	ENSMUSG00000020163.13	ENSMUST00000141683.2	605	3	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_2	2065	2051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTGGCTCCTTCCTCAT	NA	False	NA	-2	True	ATTAAA	-20	NA	80242629	80238831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80238990_80239969_80240121_80242333
ENSMUST00000141695.8	chr11	+	1957	10	FSM	ENSMUSG00000040746.16	ENSMUST00000141695.8	1957	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	236.971061420202	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTTAAGATCA	9190	False	NA	21	True	AATAAA	-22	NA	70538112	70542238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70538779_70538854_70538936_70539233_70539419_70540046_70540121_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUST00000141704.8	chr7	+	2825	20	FSM	ENSMUSG00000023072.15	ENSMUST00000141704.8	2825	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_17	42.1773724634719	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCATGTTTATTTC	NA	False	NA	8	True	AATAAA	-18	NA	35096459	35138112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35129339_35129537_35131942_35132033_35134898_35135069_35137752
ENSMUST00000141764.2	chr7	+	742	3	FSM	ENSMUSG00000030727.13	ENSMUST00000141764.2	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	11	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCCAGCTGTTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	126028270	126035305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_126028329_126028747_126028958_126034831
ENSMUST00000141843.8	chr2	-	457	4	FSM	ENSMUSG00000086453.8	ENSMUST00000141843.8	457	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	0.942809041582063	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCACTAATGAAAGAGCACG	2134	False	NA	NA	False	NA	NA	NA	164611544	164596171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_164596225_164601148_164601261_164609632_164609871_164611490
ENSMUST00000141880.2	chr11	-	465	2	FSM	ENSMUSG00000093989.2	ENSMUST00000141880.2	465	2	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTTGCTGTCTGTGCTT	NA	False	NA	-4	True	AATAAA	-17	NA	70129884	70128952	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70129297_70129763
ENSMUST00000141881.2	chr11	-	822	2	FSM	ENSMUSG00000057113.14	ENSMUST00000141881.2	822	2	0	0	0	0	multi-exon	FALSE	canonical	3	19753	junction_1	0	7637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33104465	33102510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_33102853_33103985
ENSMUST00000141957.8	chr8	+	2460	15	FSM	ENSMUSG00000031889.10	ENSMUST00000141957.8	2460	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	68.2304019854935	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACAGCCTCATCTTGTA	NA	False	NA	NA	False	NA	NA	NA	105951837	105979388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ENSMUST00000142010.2	chr18	+	956	6	FSM	ENSMUSG00000014504.17	ENSMUST00000142010.2	956	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	757.224141189384	2449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTTCATCTTTAAG	NA	False	NA	-42	True	AATAAA	-12	NA	34464228	34469606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_34464313_34464802_34464879_34465958_34466116_34467345_34467418_34467509_34467622_34469151
ENSMUST00000142020.8	chr4	+	2973	13	FSM	ENSMUSG00000006215.13	ENSMUST00000142020.8	2973	13	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	20.1582282620935	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCCTGTGGTCCCTGTG	NA	False	NA	5	True	AATAAA	-15	NA	141172009	141194536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141192014_141192099_141192401_141192659_141192748_141192834_141193419_141193658_141193869_141193984_141194075_141194153
ENSMUST00000142029.2	chr4	+	1022	2	FSM	ENSMUSG00000042380.9	ENSMUST00000142029.2	1022	2	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	0	1920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGGAGTCCTGCTCTCT	NA	False	NA	29	True	ATTAAA	-18	NA	127137576	127141602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_127137692_127140695
ENSMUST00000142045.8	chr4	+	1843	20	FSM	ENSMUSG00000028292.15	ENSMUST00000142045.8	1843	20	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	142.027152021567	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTGTAGTAGTGTG	5	True	NA	8	True	AATAGA	-23	NA	34614973	34660163	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630476_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ENSMUST00000142062.8	chr1	+	482	5	FSM	ENSMUSG00000025967.17	ENSMUST00000142062.8	482	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1439.3516552601	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGCTCCTGTAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	63216287	63218521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_63216451_63217025_63217036_63217597_63217725_63217990_63218058_63218406
ENSMUST00000142087.2	chr2	-	795	5	FSM	ENSMUSG00000026939.13	ENSMUST00000142087.2	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	9.85837207656518	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTTCTGTGGGTGAAGC	NA	False	NA	31	True	ATTAAA	-14	NA	25512017	25510078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_25510543_25511077_25511186_25511386_25511471_25511619_25511687_25511945
ENSMUST00000142105.8	chr7	-	536	6	FSM	ENSMUSG00000025466.20	ENSMUST00000142105.8	536	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	173.251262621662	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTGGTGAGTTCC	1536	False	NA	0	True	NA	NA	NA	139682289	139679382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_139679536_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139682219
ENSMUST00000142127.8	chr2	-	851	6	FSM	ENSMUSG00000051730.16	ENSMUST00000142127.8	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	209.013492387453	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTACTTGTCTCTAGCAC	6824	False	NA	-21	True	AATAAA	-18	NA	69715941	69701557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69711110_69711293_69711640_69711756_69715592
ENSMUST00000142141.3	chr17	+	451	2	FSM	ENSMUSG00000048731.16	ENSMUST00000142141.3	451	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTAGCGCCGGTTAATA	NA	False	NA	22	True	AGTAAA	-14	NA	27236960	27241491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_27237145_27241224
ENSMUST00000142142.8	chrX	+	916	3	FSM	ENSMUSG00000008682.14	ENSMUST00000142142.8	916	3	0	0	0	0	multi-exon	FALSE	canonical	3	9221	junction_2	191	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGCAAGGATGGCTTT	NA	False	NA	NA	False	AATACA	-10	NA	73314561	73315829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73315325_73315405_73315514_73315784
ENSMUST00000142145.2	chr1	+	615	4	FSM	ENSMUSG00000025995.17	ENSMUST00000142145.2	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_3	68.9025076144225	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATCCAGGCAAGGATTT	NA	False	NA	NA	False	NA	NA	NA	45834662	45841515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198
ENSMUST00000142176.2	chr7	+	619	4	FSM	ENSMUSG00000015980.15	ENSMUST00000142176.2	619	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.43650214343336	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAACTGTTCTCTTCTG	NA	False	NA	NA	False	ATTAAA	-20	NA	138815808	138822888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_138815832_138816785_138816905_138818491_138818616_138822535
ENSMUST00000142186.2	chr2	-	331	3	FSM	ENSMUSG00000009566.13	ENSMUST00000142186.2	331	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	188.5	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTACTAGGACGAGCTC	1246	False	NA	NA	False	NA	NA	NA	32575016	32573313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_32573481_32574761_32574829_32574919
ENSMUST00000142263.8	chr11	+	861	5	FSM	ENSMUSG00000020492.12	ENSMUST00000142263.8	861	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	98.5507483482495	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGCCTCCATGTTATAT	NA	False	NA	12	True	AATAAA	-20	NA	87000076	87015460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_87000131_87006970_87007017_87008493_87008671_87012759_87012966_87015082
ENSMUST00000142271.2	chr2	+	1588	4	FSM	ENSMUSG00000032966.15	ENSMUST00000142271.2	1588	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	1089.25550517569	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	False	NA	23	True	AATAAA	-24	NA	151385818	151403610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151386061_151399305_151399419_151401377_151401541_151402540
ENSMUST00000142320.8	chr2	-	755	6	FSM	ENSMUSG00000055897.14	ENSMUST00000142320.8	755	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	7.55248303539968	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAATTGTCTCTTTCT	NA	False	NA	NA	False	ATTAAA	-9	NA	173501332	173437898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_173438193_173438832_173438981_173450525_173450673_173457275_173457370_173501115_173501161_173501305
ENSMUST00000142341.2	chrX	-	714	5	FSM	ENSMUSG00000001134.10	ENSMUST00000142341.2	714	5	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_3	51.773545368267	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTACCCTTTTCCCTGT	NA	False	NA	NA	False	AATAAA	-20	NA	20828225	20825300	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ENSMUST00000142342.8	chr4	-	2118	10	FSM	ENSMUSG00000025413.14	ENSMUST00000142342.8	2118	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	94.503380304034	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATCTTGTGTTGTTTGTG	NA	False	NA	-3	True	ATTAAA	-37	NA	106535883	106519456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535690
ENSMUST00000142407.8	chr5	+	4893	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	2004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTTTTATATCTCATT	NA	False	NA	12	True	AATAAA	-20	NA	65694575	65756331	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUST00000142418.8	chr11	-	1039	3	FSM	ENSMUSG00000025155.16	ENSMUST00000142418.8	1039	3	0	0	0	0	multi-exon	FALSE	canonical	3	888	junction_2	72	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120681273	120680027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120680386_120680482_120680559_120680668
ENSMUST00000142422.8	chr8	+	1097	7	FSM	ENSMUSG00000060038.15	ENSMUST00000142422.8	1097	7	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	32.4704994315353	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAGTCAGTCTGCATC	NA	False	NA	12	True	AATAAA	-18	NA	85799686	85801780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
ENSMUST00000142428.2	chr5	-	644	5	FSM	ENSMUSG00000032959.13	ENSMUST00000142428.2	644	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1144.45257110114	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAACCTGGGAGCCCCGG	NA	False	NA	NA	False	NA	NA	NA	117425633	117421406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_117421531_117422590_117422740_117423785_117423887_117424199_117424310_117425473
ENSMUST00000142468.2	chr4	-	423	2	FSM	ENSMUSG00000063882.13	ENSMUST00000142468.2	423	2	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_1	0	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTGTCCTTCCTTTGC	NA	False	NA	-8	True	AATAAA	-16	NA	115927275	115924162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_115924370_115927059
ENSMUST00000142494.8	chr9	-	2173	10	FSM	ENSMUSG00000031922.13	ENSMUST00000142494.8	2173	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	82.7754660378169	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAACAAAGGCTTTATTT	NA	False	NA	NA	False	AATAAA	-28	NA	13738287	13719087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_13720137_13721155_13721301_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ENSMUST00000142495.8	chr11	-	1437	5	FSM	ENSMUSG00000056962.12	ENSMUST00000142495.8	1437	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	131.104919816153	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGGACAGCTTTCTT	NA	False	NA	-8	True	AATAAA	-15	NA	116734181	116728258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116728590_116729815_116729955_116731894_116732182_116733157_116733547_116733890
ENSMUST00000142519.3	chr7	+	1153	8	FSM	ENSMUSG00000030588.13	ENSMUST00000142519.3	1153	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	530.605237787328	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGGCCTTCTTCTCCTT	6235	False	NA	28	True	NA	NA	NA	28937951	28947022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28938019_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUST00000142549.2	chr2	+	701	4	FSM	ENSMUSG00000094786.2	ENSMUST00000142549.2	701	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	74.0915349790754	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATACATAAGCGAACACAT	NA	False	NA	NA	False	NA	NA	NA	177190007	177200662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_177190111_177193535_177193591_177198701_177198829_177200246
ENSMUST00000142550.8	chr11	-	1403	8	FSM	ENSMUSG00000020775.14	ENSMUST00000142550.8	1403	8	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_5	29.2665442484229	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATATGTCTTCACTTT	500	False	NA	-6	True	AATAAA	-16	NA	116029601	116022646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267
ENSMUST00000142643.2	chr15	-	505	3	FSM	ENSMUSG00000058600.14	ENSMUST00000142643.2	505	3	0	0	0	0	multi-exon	FALSE	canonical	3	4307	junction_1	417	2314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	675	False	NA	-20	True	AATAAA	-27	NA	34443054	34440650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_34440751_34441377_34441509_34442780
ENSMUST00000142669.8	chr2	-	2424	10	FSM	ENSMUSG00000039660.17	ENSMUST00000142669.8	2424	10	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_5	42.1051007144365	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCACCTATGCTCACGT	NA	False	NA	-10	True	AATAAA	-33	NA	30068441	30063464	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604
ENSMUST00000142675.8	chr5	-	801	4	FSM	ENSMUSG00000029718.15	ENSMUST00000142675.8	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_2	35.3490531069158	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTGCGGAGACAAGGC	4808	False	NA	NA	False	NA	NA	NA	137608964	137605695	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137605807_137606216_137606342_137607152_137607412_137608658
ENSMUST00000142682.9	chr16	+	1582	11	FSM	ENSMUSG00000032965.12	ENSMUST00000142682.9	1582	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	48.7155006132545	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTCAGAGAAGTGTTC	NA	False	NA	18	True	AATAAA	-14	NA	49519666	49584480	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_49519974_49522216_49522380_49523512_49523632_49526453_49526545_49532201_49532271_49557034_49557158_49578757_49578830_49579679_49579812_49581316_49581380_49582963_49583031_49584104
ENSMUST00000142690.2	chr18	-	1256	5	FSM	ENSMUSG00000063889.17	ENSMUST00000142690.2	1256	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	27.3072792493137	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTAGTCTTGTGCATTT	-5	True	NA	-6	True	AATAAA	-12	NA	3337574	3294481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
ENSMUST00000142712.2	chr19	+	414	2	FSM	ENSMUSG00000044387.6	ENSMUST00000142712.2	414	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGAAACATCGCTAG	NA	False	NA	NA	False	NA	NA	NA	23112263	23113081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_23112319_23112722
ENSMUST00000142735.8	chr4	+	581	4	FSM	ENSMUSG00000028936.16	ENSMUST00000142735.8	581	4	0	0	0	0	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	111103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCGGTGGTTTATCCTT	NA	False	NA	12	True	AATAAA	-11	NA	152410198	152416933	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
ENSMUST00000142736.9	chr9	-	1761	8	FSM	ENSMUSG00000011114.19	ENSMUST00000142736.9	1761	8	0	0	0	0	multi-exon	FALSE	canonical	3	1493	junction_5	98.6130346974724	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTATTTGTTTCTTCTTGT	NA	False	NA	-20	True	AATAAA	-18	NA	37568533	37560477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564466_37565511_37565733_37566317_37566389_37568293
ENSMUST00000142779.8	chr5	-	2008	8	FSM	ENSMUSG00000023452.20	ENSMUST00000142779.8	2008	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	261.322148518112	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTAGCTTTGTATTTTGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	32942929	32893644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_32894799_32895329_32895377_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
ENSMUST00000142788.8	chr11	-	899	7	FSM	ENSMUSG00000018565.18	ENSMUST00000142788.8	899	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	199.487468278085	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGTAATGCTTAAACAAG	9880	False	NA	2	True	AATAAA	-32	NA	69871098	69859047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69870655_69870737_69870824_69870886_69871039
ENSMUST00000142796.8	chr10	-	1135	3	FSM	ENSMUSG00000020083.14	ENSMUST00000142796.8	1135	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	41.5	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCGGTGAATGACTGAC	NA	False	NA	-10	True	AATAAA	-21	NA	61946829	61943988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_61944903_61945662_61945792_61946737
ENSMUST00000142819.8	chr10	+	1495	8	FSM	ENSMUSG00000020109.14	ENSMUST00000142819.8	1495	8	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_6	22.8937207325413	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAAGCCTGGCTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	59715439	59732597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171
ENSMUST00000142822.4	chr8	-	975	4	FSM	ENSMUSG00000079042.11	ENSMUST00000142822.4	975	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	201.802433638007	2480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGAGTTTATTGTGTGT	NA	False	NA	-21	True	ATTAAA	-21	NA	65489988	65481068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_65481644_65488316_65488407_65489541_65489796_65489932
ENSMUST00000142834.8	chr11	+	661	5	FSM	ENSMUSG00000020812.19	ENSMUST00000142834.8	661	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	73.9915535720125	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTAGCATTGTGGG	NA	False	NA	0	True	AATAAA	-13	NA	116562494	116566621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116562583_116563489_116563565_116564763_116564898_116565125_116565202_116566333
ENSMUST00000142861.2	chr2	+	1460	5	FSM	ENSMUSG00000001999.16	ENSMUST00000142861.2	1460	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	50.701947694344	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAAAAAAAGAGG	2209	False	NA	NA	False	AAAAAG	-43	NA	126912584	126929790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764
ENSMUST00000142942.8	chr11	+	1840	7	FSM	ENSMUSG00000083844.9	ENSMUST00000142942.8	1840	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	34.0216434379973	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTGACATTTAAGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	5712149	5734710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_5712241_5715508_5715572_5718885_5719073_5719166_5719244_5730205_5730636_5732184_5732358_5733891
ENSMUST00000142948.8	chr10	-	1961	14	FSM	ENSMUSG00000034758.13	ENSMUST00000142948.8	1961	14	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_8	19.8357158000858	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	-14	True	NA	NA	NA	81436709	81426737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431210_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
ENSMUST00000142955.8	chr16	-	2183	15	FSM	ENSMUSG00000039929.15	ENSMUST00000142955.8	2183	15	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	13.5367979211918	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTTTTCTTTGTTTAT	8679	False	NA	NA	False	AGTAAA	-14	NA	90607280	90580030	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822_90585997_90587962_90588101_90589573_90589770_90592248_90592374_90593245_90593381_90594780_90594867_90596907_90597005_90600214_90600348_90601335_90601488_90602285_90602426_90607086
ENSMUST00000142957.6	chr5	-	2084	7	FSM	ENSMUSG00000023452.20	ENSMUST00000142957.6	2084	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	252.221904062452	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32942983	32893665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32942892
ENSMUST00000142964.8	chr11	+	1404	5	FSM	ENSMUSG00000020287.16	ENSMUST00000142964.8	1404	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	173.059780133918	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAAGTCTCAGCCAGAA	NA	False	NA	25	True	AATAAA	-22	NA	32176504	32182022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_32176718_32177751_32177950_32179246_32179617_32179879_32180054_32181573
ENSMUST00000142985.8	chr2	+	783	6	FSM	ENSMUSG00000032966.15	ENSMUST00000142985.8	783	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	1104.02836920072	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGGGTGAAGACTCAGT	NA	False	NA	9	True	CATAAA	-16	NA	151384504	151402748	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_151384665_151384737_151384786_151387344_151387436_151399305_151399419_151401377_151401541_151402540
ENSMUST00000142994.8	chr19	+	2051	8	FSM	ENSMUSG00000025227.15	ENSMUST00000142994.8	2051	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	80.873294701764	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4253	False	NA	13	True	AGTAAA	-13	NA	46345373	46363691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360620_46360815_46362884
ENSMUST00000143017.8	chr2	-	4107	28	FSM	ENSMUSG00000027185.16	ENSMUST00000143017.8	4107	28	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_15	70.0248828986219	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591542	103551604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565262_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ENSMUST00000143039.8	chr9	-	3260	9	FSM	ENSMUSG00000039048.16	ENSMUST00000143039.8	3260	9	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_7	18.9917745353087	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122266	35115503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711
ENSMUST00000143044.2	chr9	+	566	4	FSM	ENSMUSG00000036781.14	ENSMUST00000143044.2	566	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	5436.29598164044	26095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTCCCTCTGCTTCTCT	NA	False	NA	34	True	AATAAA	-18	NA	66853636	66856798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_66853795_66854112_66854222_66854868_66854980_66856610
ENSMUST00000143101.4	chr6	+	546	2	FSM	ENSMUSG00000004285.13	ENSMUST00000143101.4	546	2	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	0	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTGGTATGGATACG	275	False	NA	37	True	ATTAAA	-19	NA	29468066	29470511	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_29468167_29470065
ENSMUST00000143107.2	chr7	+	1158	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	0	0	0	0	multi-exon	FALSE	canonical	3	7451	junction_1	3855.66202972978	233049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCTTTAAATCTGGAAG	NA	False	NA	20	True	AATAAA	-24	NA	109118353	109121574	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
ENSMUST00000143127.8	chr4	+	375	3	FSM	ENSMUSG00000085101.8	ENSMUST00000143127.8	375	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	48	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCACCTTCCAGGTCA	NA	False	NA	NA	False	NA	NA	NA	145136814	145159135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_145136997_145138756_145138851_145159036
ENSMUST00000143137.2	chr17	-	4445	4	FSM	ENSMUSG00000023961.17	ENSMUST00000143137.2	4445	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	11.5854314646552	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATATATCAGCCTTC	NA	False	NA	NA	False	AATAAA	-9	NA	44416655	44407206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416601
ENSMUST00000143170.9	chr16	-	2272	14	FSM	ENSMUSG00000022538.21	ENSMUST00000143170.9	2272	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	197.455290422861	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATATTCTTATTGTC	NA	False	NA	-8	True	ATTAAA	-14	NA	30406407	30380188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30396716_30396816_30399776_30399864_30400873_30400961_30401348_30401470_30406255
ENSMUST00000143231.2	chr7	+	827	3	FSM	ENSMUSG00000008373.17	ENSMUST00000143231.2	827	3	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_1	159.5	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAAATAAACATG	2940	False	NA	NA	False	AAAAAG	-2	NA	3632990	3634420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3633056_3633556_3633742_3633843
ENSMUST00000143241.8	chr5	+	1568	14	FSM	ENSMUSG00000019518.12	ENSMUST00000143241.8	1568	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.017448010475	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACCTTTCCTCCTTCC	8143	False	NA	13	True	AAAAAG	-12	NA	138170329	138176943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138170511_138170610_138170700_138171048_138171156_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ENSMUST00000143260.2	chr13	-	2509	5	FSM	ENSMUSG00000074863.6	ENSMUST00000143260.2	2509	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	116.358014335068	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTATGGGTGCATATTT	5491	False	NA	-4	True	ATTAAA	-17	NA	62874503	62847219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62849306_62853514_62853576_62853943_62854071_62871911_62872032_62874388
ENSMUST00000143349.8	chr2	-	1923	5	FSM	ENSMUSG00000027184.15	ENSMUST00000143349.8	1923	5	0	0	0	0	multi-exon	FALSE	canonical	3	1726	junction_3	119.813135757312	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	2740	False	NA	-9	True	NA	NA	NA	103603126	103597451	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013
ENSMUST00000143412.8	chr5	+	3330	15	FSM	ENSMUSG00000029267.18	ENSMUST00000143412.8	3330	15	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	498.553709263514	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTAGCTCTTCATTTT	NA	False	NA	104	True	AGTAAA	-14	NA	108213607	108256136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108213832_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUST00000143430.2	chr6	+	505	2	FSM	ENSMUSG00000046679.17	ENSMUST00000143430.2	505	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCATTTCTCGGGTCTCA	1787	False	NA	NA	False	ATTAAA	-1	NA	86415689	86416470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_86415830_86416105
ENSMUST00000143438.8	chr10	-	2403	4	FSM	ENSMUSG00000004667.19	ENSMUST00000143438.8	2403	4	0	0	0	0	multi-exon	FALSE	canonical	3	2552	junction_2	187.276978474843	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5600	False	NA	-19	True	ATTAAA	-19	NA	79875544	79871782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_79872136_79872360_79872433_79872597_79874448_79875416
ENSMUST00000143444.8	chr11	-	568	3	FSM	ENSMUSG00000032892.15	ENSMUST00000143444.8	568	3	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_2	39.5	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCTGTGCCTTCAAAT	7736	False	NA	-5	True	AATAAA	-19	NA	68864169	68863312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_68863568_68863768_68863855_68863942
ENSMUST00000143470.2	chr10	-	2749	3	FSM	ENSMUSG00000019822.13	ENSMUST00000143470.2	2749	3	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	10	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTACCTTGTTCCTT	NA	False	NA	0	True	AATAAA	-20	NA	41366117	41363167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_41363579_41363667_41365348_41365459
ENSMUST00000143587.3	chr2	+	659	4	FSM	ENSMUSG00000074578.15	ENSMUST00000143587.3	659	4	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	54.8351063543137	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905138	166907782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353
ENSMUST00000143598.8	chr8	-	572	2	FSM	ENSMUSG00000058833.12	ENSMUST00000143598.8	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70958762	70956944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70957160_70958405
ENSMUST00000143600.2	chr14	+	521	3	FSM	ENSMUSG00000021963.18	ENSMUST00000143600.2	521	3	0	0	0	0	multi-exon	FALSE	canonical	3	2870	junction_1	123.5	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGACTTTGCCATTAAGC	NA	False	NA	NA	False	AATAAA	-21	NA	58035882	58039604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_58036055_58038950_58039074_58039378
ENSMUST00000143657.8	chr8	+	930	7	FSM	ENSMUSG00000002395.15	ENSMUST00000143657.8	930	7	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	109.782613478739	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTCTTCAGTGCTAG	NA	False	NA	22	True	AATAAA	-23	NA	71819860	71822376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71820014_71820287_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
ENSMUST00000143678.8	chr2	+	920	7	FSM	ENSMUSG00000062647.17	ENSMUST00000143678.8	920	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1889.33392143016	12614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGGTTATTTGGGT	NA	False	NA	6	True	AATATA	-19	NA	26801017	26803330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_26801139_26801433_26801584_26802030_26802172_26802304_26802458_26802682_26802814_26802999_26803070_26803176
ENSMUST00000143712.3	chr4	+	1473	11	FSM	ENSMUSG00000042616.9	ENSMUST00000143712.3	1473	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.32148056909416	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTTCCCCATTATTCTC	2402	False	NA	7	True	AATATA	-17	NA	125952396	125982457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_125952586_125958742_125958773_125967597_125967753_125970509_125970678_125971128_125971210_125976674_125976779_125977388_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
ENSMUST00000143836.8	chr12	+	1896	10	FSM	ENSMUSG00000021268.18	ENSMUST00000143836.8	1896	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	140.228473183437	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGCAGTGATGGGTGTG	NA	False	NA	NA	False	NA	NA	NA	109506887	109538155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_109506983_109509582_109509733_109509909_109510626_109510830_109510925_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ENSMUST00000143850.8	chr11	-	3666	7	FSM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_4	25.493463214453	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATCTTGTATTTTTAA	NA	False	NA	-3	True	NA	NA	NA	70910129	70898267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
ENSMUST00000143961.2	chr17	+	614	3	FSM	ENSMUSG00000068039.14	ENSMUST00000143961.2	614	3	0	0	0	0	multi-exon	FALSE	canonical	3	3521	junction_2	31.5	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCGTGAATTTGGAGCCT	NA	False	NA	NA	False	AATAAA	-25	NA	13135325	13137266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_13135517_13136684_13136771_13136929
ENSMUST00000143992.3	chr9	-	608	3	FSM	ENSMUSG00000045519.16	ENSMUST00000143992.3	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0.5	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTTCTTGTCATATATT	NA	False	NA	NA	False	NA	NA	NA	20296473	20263876	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20264138_20265359_20265546_20296312
ENSMUST00000144051.8	chr4	-	523	4	FSM	ENSMUSG00000047675.16	ENSMUST00000144051.8	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	8358	junction_3	2305.8312070825	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGCGACTTGGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	117013266	117011706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117012011_117012204_117012305_117012767_117012875_117013254
ENSMUST00000144060.8	chr13	-	3538	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	0	0	0	0	multi-exon	TRUE	canonical	3	331	junction_5	157.730704704606	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCTGAGTCAACTATTAT	NA	False	NA	NA	False	AATAAA	-25	NA	104314977	104278656	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUST00000144065.6	chr5	-	872	7	FSM	ENSMUSG00000029469.15	ENSMUST00000144065.6	872	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	10.4682058316281	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGTTTCTCATTTCCTA	1255	False	NA	NA	False	NA	NA	NA	122752569	122740244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
ENSMUST00000144076.8	chr2	+	2887	19	FSM	ENSMUSG00000027263.13	ENSMUST00000144076.8	2887	19	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_18	58.617614173199	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCCTTGTAGAACT	NA	False	NA	2	True	AATAAA	-14	NA	121001720	121029250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
ENSMUST00000144106.2	chr1	-	677	2	FSM	ENSMUSG00000026281.16	ENSMUST00000144106.2	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATTGTGTAGCATCC	4883	False	NA	NA	False	NA	NA	NA	93727083	93726101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_93726193_93726497
ENSMUST00000144116.2	chr16	+	3266	4	FSM	ENSMUSG00000022750.19	ENSMUST00000144116.2	3266	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	142.007824510561	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAGAGAAAAAA	NA	False	NA	NA	False	TTTAAA	-14	NA	17577526	17597070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265
ENSMUST00000144149.2	chr14	-	751	2	FSM	ENSMUSG00000021905.15	ENSMUST00000144149.2	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCCTGAGTGTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	31807243	31804832	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_31805204_31806863
ENSMUST00000144183.3	chr13	-	2312	4	FSM	ENSMUSG00000058331.16	ENSMUST00000144183.3	2312	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	2.44948974278318	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCAGTATTGTGATTAAT	NA	False	NA	NA	False	AATAAA	-21	NA	67903347	67895918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67897842_67899728_67899825_67900506_67900634_67903181
ENSMUST00000144207.9	chr7	+	3103	6	FSM	ENSMUSG00000030649.19	ENSMUST00000144207.9	3103	6	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	109.312396369305	2268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTCCAGACTCCTC	7826	False	NA	10	True	NA	NA	NA	101545623	101551056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUST00000144234.8	chr10	+	2309	6	FSM	ENSMUSG00000001436.16	ENSMUST00000144234.8	2309	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.968170305347	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGTTGTGAGACACT	NA	False	NA	17	True	ATTAAA	-19	NA	76868517	76886266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_76868615_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
ENSMUST00000144236.9	chr17	-	2017	5	FSM	ENSMUSG00000024150.13	ENSMUST00000144236.9	2017	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	147.031246679065	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGACGTTGACTC	NA	False	NA	-2	True	AATAAA	-17	NA	87573332	87562085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87571568_87571794_87573262
ENSMUST00000144247.9	chr12	+	1483	12	FSM	ENSMUSG00000037486.19	ENSMUST00000144247.9	1483	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.173328488354	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAACCCCAGCTGAGC	NA	False	NA	NA	False	NA	NA	NA	3476883	3546284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_3477213_3492473_3492557_3495451_3495455_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224
ENSMUST00000144258.8	chr8	-	2995	22	FSM	ENSMUSG00000057672.17	ENSMUST00000144258.8	2995	22	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_21	57.6705790816251	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGCCTCTGTGTGCA	NA	False	NA	-18	True	TTTAAA	-33	NA	84420689	84396719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84420588
ENSMUST00000144270.8	chr5	+	5241	21	FSM	ENSMUSG00000005672.13	ENSMUST00000144270.8	5241	21	0	0	0	0	multi-exon	FALSE	canonical	3	795	junction_9	132.566766197264	2376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTCTGTTTGTTTT	727	False	NA	14	True	NA	NA	NA	75735575	75817382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ENSMUST00000144285.2	chr17	-	553	3	FSM	ENSMUSG00000040048.15	ENSMUST00000144285.2	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	2001	junction_1	144	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTCTGGTGACTAAA	1360	False	NA	NA	False	AATAAA	-22	NA	24941880	24941033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24941195_24941354_24941495_24941628
ENSMUST00000144303.2	chr5	-	483	4	FSM	ENSMUSG00000004849.15	ENSMUST00000144303.2	483	4	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_3	64.1162139313363	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGGAGGAGGATTAC	NA	False	NA	NA	False	NA	NA	NA	137074896	137066249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137066410_137070622_137070732_137071917_137072097_137074861
ENSMUST00000144337.2	chr6	-	433	2	FSM	ENSMUSG00000079523.9	ENSMUST00000144337.2	433	2	0	0	0	0	multi-exon	FALSE	canonical	3	27215	junction_1	0	2012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCCATTGAACAGGAAAAGA	NA	False	NA	NA	False	GGGGCT	-37	NA	72935382	72934637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72935008_72935319
ENSMUST00000144355.8	chr1	+	691	3	FSM	ENSMUSG00000026201.13	ENSMUST00000144355.8	691	3	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	43	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCCTGGTTTGGCCTTT	NA	False	NA	NA	False	CATAAA	-14	NA	75187491	75188879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_75187697_75187883_75188059_75188568
ENSMUST00000144366.8	chrX	-	709	6	FSM	ENSMUSG00000087174.8	ENSMUST00000144366.8	709	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	33.8904116233486	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTGGATTTACATGTA	NA	False	NA	-3	True	AATAAA	-17	NA	104113661	104087408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_104087718_104091514_104091617_104110364_104110484_104112176_104112235_104113216_104113282_104113605
ENSMUST00000144389.8	chr5	-	1610	8	FSM	ENSMUSG00000028959.15	ENSMUST00000144389.8	1610	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	518.426111083403	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650204	24646036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_24646260_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650014
ENSMUST00000144443.2	chr11	+	932	3	FSM	ENSMUSG00000018567.15	ENSMUST00000144443.2	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	916	junction_1	30.5	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAGCTGAATTGAATTTG	5269	False	NA	0	True	AATAAA	-10	NA	69882509	69885761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69882629_69883190_69883527_69885284
ENSMUST00000144476.2	chr2	-	424	2	FSM	ENSMUSG00000002458.14	ENSMUST00000144476.2	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCTTTCAAGTTGCT	NA	False	NA	-12	True	AATAAA	-17	NA	181331293	181330211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_181330512_181331169
ENSMUST00000144484.2	chr9	-	1255	7	FSM	ENSMUSG00000031922.13	ENSMUST00000144484.2	1255	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	93.9201788754685	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGTCAAAACCACCAGAAA	NA	False	NA	NA	False	AATAAA	-7	NA	13738349	13724727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13737837
ENSMUST00000144531.2	chr11	+	671	3	FSM	ENSMUSG00000059278.10	ENSMUST00000144531.2	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_1	166	6980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCTGTGTGTAGGT	NA	False	NA	17	True	ATTAAA	-17	NA	69286472	69287506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69286799_69287002_69287187_69287345
ENSMUST00000144538.2	chr7	+	1490	3	FSM	ENSMUSG00000072244.12	ENSMUST00000144538.2	1490	3	0	0	0	0	multi-exon	FALSE	canonical	3	703	junction_1	31	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	103867999	103876940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_103868091_103874713_103875188_103876015
ENSMUST00000144561.2	chr11	-	503	2	FSM	ENSMUSG00000058546.9	ENSMUST00000144561.2	503	2	0	0	0	0	multi-exon	FALSE	canonical	3	18853	junction_1	0	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGCTTGTCATTTGT	7917	False	NA	-14	True	CATAAA	-1	NA	78072456	78071760	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_78072050_78072242
ENSMUST00000144571.2	chr7	+	1013	2	FSM	ENSMUSG00000047721.9	ENSMUST00000144571.2	1013	2	0	0	0	0	multi-exon	FALSE	canonical	3	2284	junction_1	0	6203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCCAGCTGGTCTCA	576	False	NA	12	True	ATTAAA	-7	NA	126294572	126295859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_126295453_126295726
ENSMUST00000144574.8	chr5	+	2758	29	FSM	ENSMUSG00000029176.14	ENSMUST00000144574.8	2758	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	115.372837278246	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTTCCATCCTTGTG	NA	False	NA	21	True	AATAAA	-21	NA	52991467	53024084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_52991735_52993019_52993126_52993232_52993306_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ENSMUST00000144643.8	chrX	-	1497	6	FSM	ENSMUSG00000015668.14	ENSMUST00000144643.8	1497	6	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_1	29.9506260368627	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTGCTTGAATATAAAAT	NA	False	NA	-4	True	AATAAA	-17	NA	99669544	99666488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893
ENSMUST00000144698.8	chr10	+	879	7	FSM	ENSMUSG00000075706.12	ENSMUST00000144698.8	879	7	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	3813.11533467787	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	1947	False	NA	4	True	AATAAA	-14	NA	79882999	79892273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79883210_79884579_79884663_79890347_79890443_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ENSMUST00000144705.9	chr4	+	935	4	FSM	ENSMUSG00000086290.10	ENSMUST00000144705.9	935	4	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	29.9369708257569	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	False	NA	27	True	AATAAA	-16	NA	132035988	132038335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132036219_132037148_132037215_132037461_132037527_132037761
ENSMUST00000144748.8	chr7	+	2286	5	FSM	ENSMUSG00000042289.12	ENSMUST00000144748.8	2286	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	5.22015325445528	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTACCTTTTACCCA	1884	False	NA	14	True	AATAAA	-15	NA	127399775	127402974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401286_127401407
ENSMUST00000144759.8	chr16	+	2561	17	FSM	ENSMUSG00000025616.15	ENSMUST00000144759.8	2561	17	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	77.0645022043223	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTTCACCTAAGTAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	87251945	87280198	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266565_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ENSMUST00000144766.2	chr8	+	1551	5	FSM	ENSMUSG00000019428.17	ENSMUST00000144766.2	1551	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	508.381008693283	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTATCCATAGCTGCTCC	NA	False	NA	NA	False	NA	NA	NA	70980411	70985103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171
ENSMUST00000144776.7	chr6	+	777	7	FSM	ENSMUSG00000029993.17	ENSMUST00000144776.7	777	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1499.83763010089	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGGTATTAGCATCCTC	NA	False	NA	NA	False	ATTAAA	-22	NA	86986870	87000168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86993157_86993377_86996346_86996414_86997700_86997825_87000109
ENSMUST00000144777.8	chr3	-	1332	4	FSM	ENSMUSG00000027953.14	ENSMUST00000144777.8	1332	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	10.1434160364686	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCAGAGTGATGTGTT	NA	False	NA	-33	True	AATAAA	-15	NA	89177832	89175554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133
ENSMUST00000144799.2	chr16	-	514	2	FSM	ENSMUSG00000022890.14	ENSMUST00000144799.2	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	6096	junction_1	0	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84625701	84624758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_84624884_84625312
ENSMUST00000144930.2	chr9	+	481	2	FSM	ENSMUSG00000066442.18	ENSMUST00000144930.2	481	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCAATAGAAATTATTA	NA	False	NA	NA	False	AATAAA	-21	NA	89093438	89122279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_89093535_89121894
ENSMUST00000144942.2	chr11	-	3177	18	FSM	ENSMUSG00000020538.16	ENSMUST00000144942.2	3177	18	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_17	64.3975541670564	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGAGGAGGAGGGCAGG	5243	False	NA	NA	False	NA	NA	NA	60101291	60091288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
ENSMUST00000145006.8	chr4	-	657	3	FSM	ENSMUSG00000050890.16	ENSMUST00000145006.8	657	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	38.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAAAATGGAACTTCTCA	4319	False	NA	NA	False	NA	NA	NA	134014536	134005855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_134006428_134011838_134011859_134014471
ENSMUST00000145043.2	chr2	+	419	3	FSM	ENSMUSG00000039001.13	ENSMUST00000145043.2	419	3	0	0	0	0	multi-exon	FALSE	canonical	3	5195	junction_1	1122	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGGCTTAATAGTGCAT	NA	False	NA	NA	False	NA	NA	NA	179899210	179899936	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_179899241_179899413_179899645_179899778
ENSMUST00000145104.8	chr11	-	597	5	FSM	ENSMUSG00000020737.13	ENSMUST00000145104.8	597	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	740.766663666772	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTGTCTGTCTGTTTG	NA	False	NA	-111	True	NA	NA	NA	115405174	115388956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115389126_115391491_115391550_115392830_115392929_115393857_115394001_115405045
ENSMUST00000145118.8	chr12	-	4427	19	FSM	ENSMUSG00000052593.17	ENSMUST00000145118.8	4427	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	37.6614630951738	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAATGATACGAGCCA	NA	False	NA	NA	False	AATAAA	-36	NA	21423594	21373517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379157_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ENSMUST00000145157.2	chr15	+	681	4	FSM	ENSMUSG00000033099.11	ENSMUST00000145157.2	681	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	225.473329292451	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCGGCTAGTGACAGCGAA	NA	False	NA	NA	False	NA	NA	NA	78819385	78822024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_78819895_78820678_78820785_78821333_78821383_78822007
ENSMUST00000145216.8	chr8	-	1329	4	FSM	ENSMUSG00000031604.11	ENSMUST00000145216.8	1329	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	331.816214190928	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTAGCTGCCATGTTTT	NA	False	NA	-23	True	AATAAA	-34	NA	65186615	65171242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_65172216_65173375_65173531_65175497_65175625_65186541
ENSMUST00000145230.8	chr2	+	1067	8	FSM	ENSMUSG00000039041.16	ENSMUST00000145230.8	1067	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1062.45430153826	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGTCTGGGCCTGTGTT	NA	False	NA	2	True	AATAAA	-22	NA	179813451	179818079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_179813482_179813826_179814041_179814648_179814766_179816657_179816740_179817035_179817186_179817390_179817549_179817646_179817750_179817866
ENSMUST00000145259.8	chr15	+	3255	20	FSM	ENSMUSG00000008690.16	ENSMUST00000145259.8	3255	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	269.960005245468	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTTGATCCTCTGGCT	NA	False	NA	6	True	AATAAA	-16	NA	89239965	89257029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUST00000145262.2	chr11	+	642	2	FSM	ENSMUSG00000085860.2	ENSMUST00000145262.2	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTTTGGCTACATATA	NA	False	NA	NA	False	NA	NA	NA	97505807	97509857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_97505855_97509262
ENSMUST00000145275.8	chr10	-	3065	20	FSM	ENSMUSG00000040354.15	ENSMUST00000145275.8	3065	20	0	0	0	0	multi-exon	FALSE	canonical	3	1393	junction_14	176.876657025606	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGCCCTCTCCTGGTCT	NA	False	NA	-11	True	AATAAA	-22	NA	127147547	127132094	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ENSMUST00000145276.8	chr17	+	810	6	FSM	ENSMUSG00000073468.13	ENSMUST00000145276.8	810	6	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	242.374586126516	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	2990	False	NA	NA	False	AATAAA	-17	NA	8530000	8546272	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_8530118_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
ENSMUST00000145317.2	chr2	+	436	2	FSM	ENSMUSG00000002102.16	ENSMUST00000145317.2	436	2	0	0	0	0	multi-exon	FALSE	canonical	3	2116	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTTCTCAGCCTCT	2522	False	NA	20	True	AATAAA	-21	NA	90888453	90889779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_90888501_90889390
ENSMUST00000145327.2	chr2	+	611	2	FSM	ENSMUSG00000039849.7	ENSMUST00000145327.2	611	2	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	0	664	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGCACGCAAAGAAAATCT	5896	False	NA	44	True	NA	NA	NA	164721223	164725119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_164721410_164724694
ENSMUST00000145331.8	chr11	-	1843	10	FSM	ENSMUSG00000018362.15	ENSMUST00000145331.8	1843	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1279.26507644134	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTTTTCTTAATTGA	9767	False	NA	NA	False	AATAAA	-27	NA	106890266	106879454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106887334_106887473_106888063_106888141_106890184
ENSMUST00000145335.3	chr2	+	779	3	FSM	ENSMUSG00000027405.17	ENSMUST00000145335.3	779	3	0	0	0	0	multi-exon	FALSE	canonical	3	2327	junction_2	43.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCCCAATAAAAACACA	NA	False	NA	-2	True	NA	NA	NA	130119630	130121200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_130119891_130120075_130120211_130120816
ENSMUST00000145342.8	chrX	-	2572	11	FSM	ENSMUSG00000025268.16	ENSMUST00000145342.8	2572	11	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_8	16.0735808082704	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149595964	149589416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666
ENSMUST00000145417.2	chr18	+	875	1	FSM	ENSMUSG00000085939.4	ENSMUST00000145417.2	875	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCACCAAAGCAAACGAAAAT	NA	False	NA	NA	False	ATTAAA	-34	NA	50267792	50268667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_50267800_50268700
ENSMUST00000145447.8	chr6	+	2373	8	FSM	ENSMUSG00000004264.18	ENSMUST00000145447.8	2373	8	0	0	0	0	multi-exon	FALSE	canonical	1	924	junction_7	631.805091360768	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTGAGTGTGTAC	NA	False	NA	24	True	AATAAA	-25	NA	124689298	124693913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691923_124692022_124692127_124692544_124692623_124692916_124693394_124693568
ENSMUST00000145456.2	chrX	-	599	3	FSM	ENSMUSG00000025742.6	ENSMUST00000145456.2	599	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	111.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATTTATGTCCTAAGAT	NA	False	NA	NA	False	AATAAA	-25	NA	166165706	166155404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_166155579_166156998_166157183_166165465
ENSMUST00000145467.8	chr5	-	4487	26	FSM	ENSMUSG00000062234.15	ENSMUST00000145467.8	4487	26	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_22	74.6631261065327	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGTCTCTGGCTTGTA	NA	False	NA	-34	True	ATTAAA	-17	NA	108777605	108717285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ENSMUST00000145474.8	chr11	-	641	5	FSM	ENSMUSG00000047342.18	ENSMUST00000145474.8	641	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	12.1243556529821	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAACATTTTTTCACTC	NA	False	NA	NA	False	AATAAA	-15	NA	62680235	62674341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
ENSMUST00000145477.8	chrX	-	1540	10	FSM	ENSMUSG00000071708.12	ENSMUST00000145477.8	1540	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	195.70127146833	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGATTAGCAGTGCTTCA	NA	False	NA	-46	True	ATTAAA	-27	NA	156275062	156228691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_156229173_156230350_156230467_156237829_156237910_156243322_156243413_156244171_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ENSMUST00000145481.8	chr2	-	1162	9	FSM	ENSMUSG00000026946.10	ENSMUST00000145481.8	1162	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.57087047515039	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTCTTCTTACTCTTT	8642	False	NA	NA	False	CATAAA	-17	NA	51863016	51838512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_51838789_51839995_51840103_51842453_51842641_51842787_51842895_51845937_51846101_51848908_51849005_51850582_51850673_51862599_51862640_51862920
ENSMUST00000145559.8	chr7	+	578	4	FSM	ENSMUSG00000019738.16	ENSMUST00000145559.8	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	1146	junction_3	50.6776303927307	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTAGTGTTTCCCGTGT	NA	False	NA	11	True	AATAAA	-11	NA	29931766	29932808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_29931962_29932174_29932407_29932491_29932544_29932709
ENSMUST00000145574.2	chr13	+	718	7	FSM	ENSMUSG00000025875.15	ENSMUST00000145574.2	718	7	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_6	112.929796284634	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTTTATGTTCACCG	NA	False	NA	17	True	AATAAA	-18	NA	54940683	54944588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969_54944032_54944410
ENSMUST00000145593.8	chr6	-	649	4	FSM	ENSMUSG00000045896.15	ENSMUST00000145593.8	649	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	4.98887651569859	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGTTAGAAGCCTGAA	NA	False	NA	NA	False	NA	NA	NA	83808695	83786693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83787058_83791703_83791852_83808252_83808311_83808616
ENSMUST00000145622.8	chr7	-	4363	6	FSM	ENSMUSG00000012640.17	ENSMUST00000145622.8	4363	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	40.2641279552904	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	0	True	AATAAA	-16	NA	42962687	42945946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_42949601_42950593_42950690_42951034_42951162_42957890_42957997_42960454_42960675_42962527
ENSMUST00000145634.9	chr18	+	1538	8	FSM	ENSMUSG00000025421.16	ENSMUST00000145634.9	1538	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	170.606361581991	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAATTAGACATTGTT	NA	False	NA	19	True	NA	NA	NA	77031839	77059101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_77031882_77033038_77033054_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUST00000145735.6	chr3	+	881	4	FSM	ENSMUSG00000087260.6	ENSMUST00000145735.6	881	4	0	0	0	0	multi-exon	FALSE	canonical	3	1062	junction_2	64.8194072447099	5671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGGTTCATTTCTGG	3010	False	NA	9	True	AATAAA	-13	NA	107186173	107191395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_107186430_107187185_107187248_107189224_107189343_107190950
ENSMUST00000145795.2	chr4	-	1014	2	FSM	ENSMUSG00000054428.13	ENSMUST00000145795.2	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	7869	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAACAAAAAA	9305	False	NA	NA	False	NA	NA	NA	132260906	132259798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132260699_132260792
ENSMUST00000145850.8	chr7	+	1975	14	FSM	ENSMUSG00000002963.18	ENSMUST00000145850.8	1975	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	65.4438645579861	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTTGCTGGGGTTGTG	9343	False	NA	21	True	AATAAA	-23	NA	44506590	44512080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44506979_44507586_44508174_44509146_44509227_44509311_44509370_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUST00000145859.4	chr2	+	560	2	FSM	ENSMUSG00000074578.15	ENSMUST00000145859.4	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	0	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATTTGCAGGCTAGTG	NA	False	NA	NA	False	AATGAA	-12	NA	166905152	166906050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_166905218_166905555
ENSMUST00000145881.8	chr7	-	895	2	FSM	ENSMUSG00000040139.15	ENSMUST00000145881.8	895	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGTCTGGCTTGGTGT	NA	False	NA	-7	True	ATTAAA	-14	NA	137012485	136977302	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_136978081_137012368
ENSMUST00000145919.2	chr8	+	3989	12	FSM	ENSMUSG00000034518.15	ENSMUST00000145919.2	3989	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	21.8858798209528	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTTAGCTGTCTTT	NA	False	NA	32	True	ATTAAA	-23	NA	75720306	75758606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ENSMUST00000145959.8	chr7	-	2362	17	FSM	ENSMUSG00000038520.16	ENSMUST00000145959.8	2362	17	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	59.8690954813082	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCTGGCTGGCATCAGG	7699	False	NA	-10	True	AATAAA	-15	NA	44498503	44490455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491609_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ENSMUST00000145967.8	chr2	-	1330	6	FSM	ENSMUSG00000027195.11	ENSMUST00000145967.8	1330	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_3	299.829684987994	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTTTTGATAGTGGAA	NA	False	NA	NA	False	AATAAA	-31	NA	93896814	93863033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93882598_93882634_93895898_93895944_93896753
ENSMUST00000145976.2	chr4	-	718	2	FSM	ENSMUSG00000028639.15	ENSMUST00000145976.2	718	2	0	0	0	0	multi-exon	FALSE	canonical	3	10943	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAAGGC	NA	False	NA	9	True	NA	NA	NA	119136647	119135363	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_119135565_119136130
ENSMUST00000146010.3	chr18	+	430	3	FSM	ENSMUSG00000087590.3	ENSMUST00000146010.3	430	3	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	24	4885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACGTGTATGTTGTGTG	NA	False	NA	15	True	AATAAA	-19	NA	33927944	33929039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_33928178_33928435_33928499_33928905
ENSMUST00000146089.8	chr2	+	750	4	FSM	ENSMUSG00000016344.15	ENSMUST00000146089.8	750	4	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	285.921123544395	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGTATGTTTGAAAC	3436	False	NA	1	True	AATAAA	-17	NA	180829139	180830297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180829248_180829457_180829680_180829796_180829894_180829974
ENSMUST00000146105.8	chr17	+	599	3	FSM	ENSMUSG00000023984.18	ENSMUST00000146105.8	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	122	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAATGTTTATTGTCCA	NA	False	NA	NA	False	AATAAA	-12	NA	47922513	47961214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_47922618_47923887_47924043_47960874
ENSMUST00000146137.8	chr1	-	2777	16	FSM	ENSMUSG00000003458.13	ENSMUST00000146137.8	2777	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	134.272790327088	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGTTTGGTATTCTTC	8996	False	NA	50	True	ATTAAA	-21	NA	171910362	171893579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171908778_171908884_171910167
ENSMUST00000146165.8	chr3	+	3574	7	FSM	ENSMUSG00000025766.15	ENSMUST00000146165.8	3574	7	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	8.72576007513895	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGTGCTGTGTTTCA	NA	False	NA	12	True	ATTAAA	-22	NA	41697052	41713374	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_41697125_41699130_41699248_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
ENSMUST00000146201.8	chr9	+	2009	6	FSM	ENSMUSG00000032309.16	ENSMUST00000146201.8	2009	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	392.751626349274	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTTGTAATTATTG	NA	False	NA	9	True	AATAAA	-16	NA	55116473	55131715	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ENSMUST00000146280.2	chr8	-	726	3	FSM	ENSMUSG00000031601.17	ENSMUST00000146280.2	726	3	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_2	66.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTTTAGTTATAGAGA	NA	False	NA	-4	True	AATAAA	-15	NA	40964763	40960358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_40960690_40963055_40963268_40964580
ENSMUST00000146285.8	chr4	+	925	10	FSM	ENSMUSG00000028820.14	ENSMUST00000146285.8	925	10	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_7	318.457392928962	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTGTTCAAGTAGGA	NA	False	NA	18	True	AATAAA	-19	NA	126917319	126930806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126929600_126929648_126930355_126930443_126930724
ENSMUST00000146297.8	chr2	-	2580	17	FSM	ENSMUSG00000027620.17	ENSMUST00000146297.8	2580	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	722.964372825522	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTCGTTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	156021500	155989165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021353
ENSMUST00000146303.2	chr7	+	1185	2	FSM	ENSMUSG00000006333.15	ENSMUST00000146303.2	1185	2	0	0	0	0	multi-exon	FALSE	canonical	3	14286	junction_1	0	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTGAACTGTTAGCC	1319	False	NA	NA	False	NA	NA	NA	3707046	3708428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3707448_3707644
ENSMUST00000146324.8	chr3	-	1264	5	FSM	ENSMUSG00000050174.16	ENSMUST00000146324.8	1264	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	11.0792599030802	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTTTTTCTCTACTGA	NA	False	NA	62	True	TATAAA	-29	NA	37474335	37459058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849_37471054_37473971
ENSMUST00000146390.3	chr11	+	2143	2	FSM	ENSMUSG00000047904.7	ENSMUST00000146390.3	2143	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAAGTAAGGTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	113510167	113516854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_113510449_113514992
ENSMUST00000146429.2	chr7	+	2080	4	FSM	ENSMUSG00000030410.17	ENSMUST00000146429.2	2080	4	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_2	52.8288641642889	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTTCTGTTCCCTGG	NA	False	NA	13	True	ACTAAA	-13	NA	18811917	18816700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_18812163_18813966_18815227_18815843_18815919_18816200
ENSMUST00000146471.2	chr4	-	501	2	FSM	ENSMUSG00000039759.11	ENSMUST00000146471.2	501	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCCATCTCCAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	152073437	152069915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_152070319_152073339
ENSMUST00000146474.8	chr17	+	764	5	Antisense	novelGene_ENSMUSG00000038045.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	895	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAACAGTAAAGAGCAAACT	NA	False	NA	NA	False	NA	NA	NA	79192325	79202529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr17_+_79192646_79196359_79196517_79198274_79198370_79201971_79202099_79202464
ENSMUST00000146497.9	chr2	-	3808	22	FSM	ENSMUSG00000006800.15	ENSMUST00000146497.9	3808	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	257.404161765755	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTTGGGACTTTTTTGC	NA	False	NA	-10	True	NA	NA	NA	165997583	165915833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165983633_165983687_165997422
ENSMUST00000146511.8	chr5	+	1298	9	FSM	ENSMUSG00000016503.19	ENSMUST00000146511.8	1298	9	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_8	56.9906790624572	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGCTGTTTCCGTCGT	NA	False	NA	23	True	ATTAAA	-23	NA	146885466	146892424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933_146891994_146892177
ENSMUST00000146577.8	chr15	-	725	5	FSM	ENSMUSG00000022283.16	ENSMUST00000146577.8	725	5	0	0	0	0	multi-exon	FALSE	canonical	3	5911	junction_3	364.961984321655	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGAAAAAAAACATTGCAAA	10029	False	NA	NA	False	AAGAAA	-32	NA	36598556	36596267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216
ENSMUST00000146590.8	chr10	+	3070	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_8	64.4659551623956	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGGTGGGTCTGCA	NA	False	NA	31	True	NA	NA	NA	59715396	59735118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
ENSMUST00000146665.3	chr1	-	1569	4	FSM	ENSMUSG00000033845.14	ENSMUST00000146665.3	1569	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	1077.56031024821	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATATAAGAGTTTTGTC	1620	False	NA	NA	False	TTTAAA	-22	NA	4855962	4851443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_4852525_4852790_4852957_4854173_4854329_4855795
ENSMUST00000146673.2	chr16	+	865	3	FSM	ENSMUSG00000086965.2	ENSMUST00000146673.2	865	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	96	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTGAGTACCATGCC	NA	False	NA	NA	False	AAAACA	-1	NA	18317650	18320408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18317702_18317795_18317891_18319689
ENSMUST00000146696.2	chr11	+	813	4	FSM	ENSMUSG00000020407.14	ENSMUST00000146696.2	813	4	0	0	0	0	multi-exon	FALSE	canonical	3	2674	junction_3	158.865421732428	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGGACGGGCCTGAGC	NA	False	NA	-62	True	NA	NA	NA	9083014	9086082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_9083349_9084721_9084932_9085163_9085311_9085960
ENSMUST00000146698.2	chr5	+	809	3	FSM	ENSMUSG00000029464.11	ENSMUST00000146698.2	809	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	240	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGAGGTTTGTAAA	5322	False	NA	NA	False	AATAAA	-42	NA	122519330	122520965	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_122519369_122520110_122520240_122520323
ENSMUST00000146721.2	chr4	+	2358	2	FSM	ENSMUSG00000028261.14	ENSMUST00000146721.2	2358	2	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_1	0	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGGTTTTTTCTTTC	11	True	NA	14	True	AATAAA	-27	NA	24898130	24903505	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_24898677_24901693
ENSMUST00000146757.8	chr2	-	1462	7	FSM	ENSMUSG00000027371.11	ENSMUST00000146757.8	1462	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	9.94428926011753	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGCTTCCACTGTCTT	NA	False	NA	-5	True	AATAAA	-18	NA	127286485	127278135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_127278327_127278465_127278554_127278656_127278766_127280032_127280490_127282305_127282523_127283793_127284045_127286336
ENSMUST00000146759.2	chr11	-	450	3	FSM	ENSMUSG00000057113.14	ENSMUST00000146759.2	450	3	0	0	0	0	multi-exon	FALSE	canonical	3	20991	junction_2	1006.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGCAAGCAAGTATAGAA	NA	False	NA	NA	False	AAAACA	-38	NA	33107277	33106025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_33106105_33106663_33106748_33106990
ENSMUST00000146770.8	chr17	-	685	3	FSM	ENSMUSG00000023944.15	ENSMUST00000146770.8	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	10210	junction_2	156.5	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGATGACAGCGGCAAAG	NA	False	NA	-15	True	NA	NA	NA	45882508	45881370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45881726_45881943_45882104_45882338
ENSMUST00000146823.8	chr2	-	676	4	FSM	ENSMUSG00000089917.8	ENSMUST00000146823.8	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	13.0724477007517	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCCTGTATGGTGCGA	4577	False	NA	NA	False	ATTAAA	-21	NA	181223771	181216077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_181216333_181216443_181216551_181216639_181216831_181223648
ENSMUST00000146846.2	chr2	-	676	6	FSM	ENSMUSG00000086453.8	ENSMUST00000146846.2	676	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.37045990927054	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCCCCAAGTACCACTAA	2092	False	NA	NA	False	NA	NA	NA	164611586	164596183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_164596225_164601148_164601261_164604463_164604529_164604640_164604802_164609632_164609834_164611490
ENSMUST00000146863.2	chr8	+	531	3	FSM	ENSMUSG00000038005.16	ENSMUST00000146863.2	531	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	396.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCTCTTCTAGTGTTTC	NA	False	NA	17	True	AATAAA	-30	NA	61343451	61360609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_61343571_61358581_61358755_61360370
ENSMUST00000146867.2	chr17	+	962	5	FSM	ENSMUSG00000044533.16	ENSMUST00000146867.2	962	5	0	0	0	0	multi-exon	FALSE	canonical	2	95	junction_4	4232.31002970009	58567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGTTTTTTTTTGTCT	6378	False	NA	0	True	AATAAA	-19	NA	24939224	24940899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24939427_24939507_24939706_24939942_24940277_24940596_24940702_24940776
ENSMUST00000146927.2	chr7	+	813	5	FSM	ENSMUSG00000006333.15	ENSMUST00000146927.2	813	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	7209.4740229437	12910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTATTGGTGTGCCTCT	1635	False	NA	0	True	AATAAA	-15	NA	3707362	3709893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3707448_3707644_3707768_3708731_3708919_3709006_3709181_3709649
ENSMUST00000146939.2	chr8	-	432	1	FSM	ENSMUSG00000066902.8	ENSMUST00000146939.2	432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	532	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGACAATGGAAACACA	NA	False	NA	NA	False	AAGAAA	-19	NA	3634230	3633798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_3633800_3634200
ENSMUST00000146968.8	chr6	-	2569	14	FSM	ENSMUSG00000058486.12	ENSMUST00000146968.8	2569	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.071427887522	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5776	False	NA	-1	True	NA	NA	NA	34887811	34857360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_34857904_34861118_34861317_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
ENSMUST00000146980.2	chr2	+	412	4	FSM	ENSMUSG00000084762.2	ENSMUST00000146980.2	412	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	289.483831826389	4299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTCTGAGCCCAAAATC	NA	False	NA	25	True	AATAAA	-35	NA	135490826	135493983	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_135490892_135491052_135491123_135493417_135493478_135493766
ENSMUST00000146998.9	chr7	+	944	9	FSM	ENSMUSG00000056394.21	ENSMUST00000146998.9	944	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	552.157232475497	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGACCAAGGGGTGAGT	2629	False	NA	NA	False	NA	NA	NA	13012760	13025443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023313_13023422_13025112_13025239_13025381
ENSMUST00000147022.8	chr3	-	4617	8	FSM	ENSMUSG00000019338.14	ENSMUST00000147022.8	4617	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_7	24.2924360445714	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGCTTTTCTTTTTAT	NA	False	NA	-1	True	ATTAAA	-22	NA	94922715	94914142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
ENSMUST00000147033.2	chr8	+	422	3	FSM	ENSMUSG00000052446.18	ENSMUST00000147033.2	422	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	200	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTGTTTGTTTGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	72704924	72720088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_72705005_72719637_72719835_72719943
ENSMUST00000147059.8	chr4	-	482	4	FSM	ENSMUSG00000059291.16	ENSMUST00000147059.8	482	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	4621.70800558504	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCCAAACACAGAATCAGCA	NA	False	NA	NA	False	NA	NA	NA	135780065	135777642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_135777702_135778481_135778614_135778924_135779028_135779877
ENSMUST00000147096.2	chr2	-	656	3	FSM	ENSMUSG00000036504.7	ENSMUST00000147096.2	656	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	365.5	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCACCTGCCAGGCCTTA	5546	False	NA	-80	True	GGGGCT	-34	NA	25464890	25463513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_25463712_25464199_25464462_25464694
ENSMUST00000147105.8	chr2	-	2928	15	FSM	ENSMUSG00000027201.17	ENSMUST00000147105.8	2928	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	219.217253156846	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965581	124929661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124955962_124955971_124957357_124957411_124958584_124958794_124965304
ENSMUST00000147112.2	chr17	-	855	3	FSM	ENSMUSG00000002769.10	ENSMUST00000147112.2	855	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	10	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCCTGGTGTTTCTT	5346	False	NA	NA	False	AGTAAA	-23	NA	47037727	47036589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47036898_47036986_47037338_47037531
ENSMUST00000147114.2	chr7	+	719	5	FSM	ENSMUSG00000002043.18	ENSMUST00000147114.2	719	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	197.958802532244	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCAGTGCTTATCACA	505	False	NA	21	True	AGTAAA	-22	NA	19242634	19250070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_19242758_19248346_19248465_19248931_19249016_19249128_19249223_19249770
ENSMUST00000147117.8	chr16	+	1947	10	FSM	ENSMUSG00000022884.17	ENSMUST00000147117.8	1947	10	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_3	486.088189935799	4896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACCAAAAAAAGTTTGT	6049	False	NA	NA	False	AATAAA	-13	NA	22926503	22932886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ENSMUST00000147129.8	chrX	-	3103	19	FSM	ENSMUSG00000031095.16	ENSMUST00000147129.8	3103	19	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	416.688551277129	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTATTTGACTTCTTTTA	8155	False	NA	-1	True	GATAAA	-18	NA	37653539	37622446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37632208_37632295_37633625_37633737_37634372_37634494_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539
ENSMUST00000147143.2	chr2	+	593	2	FSM	ENSMUSG00000062647.17	ENSMUST00000147143.2	593	2	0	0	0	0	multi-exon	FALSE	canonical	3	4686	junction_1	0	2361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGGTTATTTGGGT	NA	False	NA	6	True	AATATA	-19	NA	26802630	26803330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_26803070_26803176
ENSMUST00000147148.5	chr5	+	922	3	FSM	ENSMUSG00000061461.12	ENSMUST00000147148.5	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_1	5	2117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGGTGTGTACTGTT	3407	False	NA	13	True	ATTAAA	-14	NA	53424479	53435882	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_53424701_53434484_53434542_53435238
ENSMUST00000147165.8	chr4	+	1964	10	FSM	ENSMUSG00000028653.17	ENSMUST00000147165.8	1964	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	29.573929126016	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGCTGCATTGTCAAT	NA	False	NA	26	True	AATAAA	-30	NA	122910389	122948742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122946276_122946395_122947915
ENSMUST00000147196.3	chr10	-	860	4	FSM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	0	0	0	0	multi-exon	TRUE	canonical	3	617	junction_3	154.165135127528	3553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTCACCGGAGCACTCT	NA	False	NA	-12	True	AATAAA	-17	NA	43416964	43401128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_43401405_43406593_43406667_43408671_43409154_43416935
ENSMUST00000147233.8	chr1	+	2584	14	FSM	ENSMUSG00000026177.12	ENSMUST00000147233.8	2584	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	14.9123672911061	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCTTAAAGAG	4971	False	NA	NA	False	NA	NA	NA	74414361	74425211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_74414481_74414876_74415011_74415951_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74423333_74423855_74423930_74424299_74424454_74424551
ENSMUST00000147265.9	chr17	+	4010	4	FSM	ENSMUSG00000071172.14	ENSMUST00000147265.9	4010	4	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_1	325.271510519374	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAGTAGTCAGTCGAGCG	NA	False	NA	15	True	AATAAA	-15	NA	29251622	29261217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29251761_29255214_29255423_29257463_29260268_29260357
ENSMUST00000147273.2	chr16	+	2971	6	FSM	ENSMUSG00000022721.20	ENSMUST00000147273.2	2971	6	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	26.1564523588349	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGAACCAGAGCCTTAAC	395	False	NA	14	True	AATAAA	-28	NA	18066872	18071372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18069525_18069989_18070113_18070265
ENSMUST00000147336.8	chr2	-	2948	11	FSM	ENSMUSG00000037376.15	ENSMUST00000147336.8	2948	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	111.30929880293	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTAATGATACAATGCT	NA	False	NA	-12	True	AATAAA	-23	NA	132657975	132646126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652006_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ENSMUST00000147394.8	chr9	+	452	5	FSM	ENSMUSG00000036781.14	ENSMUST00000147394.8	452	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	5638.10178051975	1656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTATTTTGGTGTCAGT	NA	False	NA	-14	True	TATAAA	-15	NA	66853447	66856750	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66855922_66856000_66856610
ENSMUST00000147407.2	chr13	-	534	4	FSM	ENSMUSG00000021606.9	ENSMUST00000147407.2	534	4	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_3	967.204333231723	7320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATAGTGAGTTGTTTCT	NA	False	NA	-8	True	AATAAA	-14	NA	73476571	73467997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476396
ENSMUST00000147425.2	chr2	+	1381	3	FSM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	178.5	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTTGGACAGATTTT	NA	False	NA	NA	False	TATAAA	-29	NA	119424777	119431227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_119424916_119426739_119426824_119430068
ENSMUST00000147452.2	chr4	+	781	2	FSM	ENSMUSG00000028890.14	ENSMUST00000147452.2	781	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAATTCATGTTTATA	352	False	NA	4	True	AATAAA	-15	NA	124696374	124699171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_124696437_124698452
ENSMUST00000147467.2	chrX	-	1047	5	FSM	ENSMUSG00000031171.12	ENSMUST00000147467.2	1047	5	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	13.7386316640341	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTGAAGTCAATGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	8118602	8114760	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ENSMUST00000147543.2	chr16	-	678	3	FSM	ENSMUSG00000002846.10	ENSMUST00000147543.2	678	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	91	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAATTTTAGTATTTAAT	NA	False	NA	-4	True	ATTAAA	-19	NA	38343003	38337021	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_38337233_38338728_38338895_38342702
ENSMUST00000147548.3	chr6	+	698	2	FSM	ENSMUSG00000087231.8	ENSMUST00000147548.3	698	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGAGAGTGTTGACAGT	NA	False	NA	NA	False	NA	NA	NA	67013588	67040745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_67013920_67040378
ENSMUST00000147550.2	chr4	+	667	3	FSM	ENSMUSG00000028869.14	ENSMUST00000147550.2	667	3	0	0	0	0	multi-exon	FALSE	canonical	3	812	junction_2	7.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAACTGTGTTCGCTTTCTT	9851	False	NA	28	True	ATTAAA	-22	NA	124946943	124949173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_124947328_124947934_124948021_124948976
ENSMUST00000147564.2	chr5	+	425	3	FSM	ENSMUSG00000029621.15	ENSMUST00000147564.2	425	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	169.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATCATAC	NA	False	NA	NA	False	NA	NA	NA	145033066	145035738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145033085_145034025_145034134_145035439
ENSMUST00000147570.3	chr2	-	1133	8	FSM	ENSMUSG00000027404.17	ENSMUST00000147570.3	1133	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	1649.031750539	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCCCTCCAAGGCCC	NA	False	NA	NA	False	NA	NA	NA	130021323	130013706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018548_130018673_130018934_130019087_130021153
ENSMUST00000147605.8	chr8	+	966	4	FSM	ENSMUSG00000031767.14	ENSMUST00000147605.8	966	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.86744175568088	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTTGCAATATTCATCT	NA	False	NA	NA	False	NA	NA	NA	114860380	114879046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_114860441_114863077_114863232_114874634_114874734_114878393
ENSMUST00000147630.2	chr17	+	2684	4	FSM	ENSMUSG00000095990.2	ENSMUST00000147630.2	2684	4	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_3	43.3615292883245	1785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCACCTTCTAAGGGAT	NA	False	NA	NA	False	NA	NA	NA	17341676	17367093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_17341800_17362997_17363125_17363366_17363428_17364720
ENSMUST00000147632.3	chr13	+	555	3	FSM	ENSMUSG00000071451.11	ENSMUST00000147632.3	555	3	0	0	0	0	multi-exon	FALSE	canonical	3	1035	junction_1	31.5	7051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATTTTACTTTGTTTT	NA	False	NA	22	True	AATAAA	-22	NA	34346946	34362156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_34347233_34350043_34350120_34361963
ENSMUST00000147648.2	chr17	-	516	2	FSM	ENSMUSG00000040048.15	ENSMUST00000147648.2	516	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGAGATGCAGTGGAGAA	NA	False	NA	NA	False	NA	NA	NA	24943368	24941655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24941964_24943160
ENSMUST00000147656.8	chr8	+	2109	11	FSM	ENSMUSG00000002342.18	ENSMUST00000147656.8	2109	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	71.0071123198233	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTGGCCCAGTCATGT	5874	False	NA	32	True	AATAAA	-42	NA	70625062	70635525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633519_70633798_70633974_70634079_70634177_70634532
ENSMUST00000147688.8	chr16	-	713	5	FSM	ENSMUSG00000023791.19	ENSMUST00000147688.8	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	176.233332545237	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAACCTAATAAATGAGAC	NA	False	NA	-43	True	NA	NA	NA	31918525	31903276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_31903445_31904054_31904156_31911161_31911304_31915817_31915882_31918287
ENSMUST00000147712.8	chr9	+	3495	22	FSM	ENSMUSG00000035919.17	ENSMUST00000147712.8	3495	22	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	15.2048745018425	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATAACTGGACTGAAT	NA	False	NA	-3	True	AATAAA	-14	NA	22387026	22799570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_22387487_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ENSMUST00000147742.9	chrX	-	1991	6	FSM	ENSMUSG00000045010.15	ENSMUST00000147742.9	1991	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	73.271003814606	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838029	100833953	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_100834130_100834212_100834255_100834844_100834891_100835166_100835250_100835786_100835944_100836542
ENSMUST00000147762.9	chr11	-	611	4	FSM	ENSMUSG00000085156.9	ENSMUST00000147762.9	611	4	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_3	5.24933858267454	2469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	-1	True	NA	NA	NA	6478779	6475590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6475818_6476354_6476438_6478305_6478375_6478547
ENSMUST00000147780.2	chr9	+	1834	9	FSM	ENSMUSG00000004100.13	ENSMUST00000147780.2	1834	9	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_7	71.605582010064	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799580	20803474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_20799614_20799702_20799874_20800633_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802662_20802746_20803044_20803127
ENSMUST00000147782.2	chr11	-	565	2	FSM	ENSMUSG00000020460.16	ENSMUST00000147782.2	565	2	0	0	0	0	multi-exon	FALSE	canonical	3	16484	junction_1	0	4123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29496671	29495845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_29496030_29496290
ENSMUST00000147789.2	chr12	+	730	2	FSM	ENSMUSG00000020649.12	ENSMUST00000147789.2	730	2	0	0	0	0	multi-exon	FALSE	canonical	3	6189	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTTCTGTTATGAGTTAC	NA	False	NA	NA	False	NA	NA	NA	24758554	24759588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_24758634_24758937
ENSMUST00000147799.8	chr1	+	855	5	FSM	ENSMUSG00000003464.14	ENSMUST00000147799.8	855	5	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_2	19.600701518058	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTTTGACTGATTCATT	NA	False	NA	NA	False	TATAAA	-14	NA	171954322	171958578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178
ENSMUST00000147812.8	chr8	-	1532	11	FSM	ENSMUSG00000052926.17	ENSMUST00000147812.8	1532	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	502.65889030236	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	4854	False	NA	-8	True	AATAAA	-14	NA	85696069	85684295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692623_85692714_85692917_85694291_85694498_85695914
ENSMUST00000147820.2	chr2	+	599	6	FSM	ENSMUSG00000078887.11	ENSMUST00000147820.2	599	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	84.5846321739357	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	175661037	175671684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_175661175_175664841_175664897_175666200_175666303_175670021_175670149_175670349_175670411_175671567
ENSMUST00000147867.3	chr16	-	1078	7	FSM	ENSMUSG00000033809.16	ENSMUST00000147867.3	1078	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	158.953260076316	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGGAACGGACTCTGTG	NA	False	NA	-55	True	NA	NA	NA	20429511	20424268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427491_20427640_20429329
ENSMUST00000147908.2	chr10	-	1046	2	FSM	ENSMUSG00000034792.9	ENSMUST00000147908.2	1046	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	475	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACTGAGGAAGAGAGAAA	6420	False	NA	NA	False	AATAAA	-25	NA	81344007	81338139	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_81338940_81343761
ENSMUST00000147914.8	chr10	+	3041	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_8	46.5154544210846	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGGTCTGCATTGAAC	NA	False	NA	37	True	NA	NA	NA	59715377	59735124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
ENSMUST00000147964.8	chr8	-	3309	15	FSM	ENSMUSG00000031832.16	ENSMUST00000147964.8	3309	15	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_9	11.7969643276115	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGTGTGTAAAGCCCAC	1064	False	NA	-2	True	NA	NA	NA	120331961	120324713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_120326243_120326319_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120328520_120329496_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
ENSMUST00000148032.8	chrX	+	1474	11	FSM	ENSMUSG00000001127.13	ENSMUST00000148032.8	1474	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	115.810362230674	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGTTGTGTAGTTATTA	6305	False	NA	NA	False	NA	NA	NA	20714813	20720799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20720500
ENSMUST00000148062.8	chr17	+	2271	7	FSM	ENSMUSG00000023902.19	ENSMUST00000148062.8	2271	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	107.099642078456	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCTGTACTAACTGCTTCA	885	False	NA	NA	False	NA	NA	NA	23819835	23829796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_23819934_23824478_23824804_23826097_23826363_23826553_23826619_23827081_23827140_23828240_23828441_23828536
ENSMUST00000148086.8	chr9	-	2467	11	FSM	ENSMUSG00000031922.13	ENSMUST00000148086.8	2467	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	79.3466445415306	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGCTAACAAAGGCTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	13738348	13719090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732970_13738141
ENSMUST00000148088.2	chr9	+	676	2	FSM	ENSMUSG00000010607.9	ENSMUST00000148088.2	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	0	2750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGGAACACGACCAGCC	NA	False	NA	11	True	AATAAA	-11	NA	22068241	22069621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_22068324_22069027
ENSMUST00000148095.2	chr3	-	1045	5	FSM	ENSMUSG00000027953.14	ENSMUST00000148095.2	1045	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	63.1124987621311	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCAGAGTGATGTGTT	NA	False	NA	-33	True	AATAAA	-15	NA	89177876	89175554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177447_89177777
ENSMUST00000148165.7	chr9	-	1888	10	FSM	ENSMUSG00000032579.15	ENSMUST00000148165.7	1888	10	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_9	18.5818177425483	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGTTATTAACATTCA	NA	False	NA	-12	True	AATAAA	-12	NA	107215516	107204890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107214578_107215479
ENSMUST00000148204.8	chr4	-	3202	4	FSM	ENSMUSG00000040842.18	ENSMUST00000148204.8	3202	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	172.554017307303	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGCTTCCTGTCTCAT	NA	False	NA	0	True	AATACA	-31	NA	140867038	140840311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_140843176_140845837_140846090_140847634_140847685_140867002
ENSMUST00000148223.8	chr4	-	845	4	FSM	ENSMUSG00000036078.17	ENSMUST00000148223.8	845	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	233.709696465984	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATACTCCAGGGGGCCAG	34	False	NA	NA	False	NA	NA	NA	41745072	41739100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_41739581_41740549_41740643_41740775_41740977_41745001
ENSMUST00000148235.8	chr8	-	1459	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_2	17.3076733143296	1744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTTGCAGAGTGGCTT	NA	False	NA	NA	False	AATAAA	-32	NA	117648194	117615423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
ENSMUST00000148248.3	chr2	+	535	5	FSM	ENSMUSG00000026728.10	ENSMUST00000148248.3	535	5	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_3	13.8293166859393	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGACTTCTCAGCATCA	1399	False	NA	NA	False	NA	NA	NA	13584179	13587289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ENSMUST00000148330.8	chr1	-	1705	12	FSM	ENSMUSG00000026034.18	ENSMUST00000148330.8	1705	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_9	47.751422461613	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	-12	True	AATAAA	-20	NA	58463225	58451158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58460241_58460468_58460932_58461094_58463078
ENSMUST00000148381.3	chr7	-	959	6	FSM	ENSMUSG00000002635.12	ENSMUST00000148381.3	959	6	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_1	296.710903068964	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTGTTTACCTTAT	5785	False	NA	NA	False	ATTAAA	-20	NA	33896033	33884057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_33884237_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ENSMUST00000148385.8	chr3	+	4057	24	FSM	ENSMUSG00000034349.15	ENSMUST00000148385.8	4057	24	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	205.937434292797	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912340	68941956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_68912424_68913408_68913558_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ENSMUST00000148393.2	chr11	-	562	3	FSM	ENSMUSG00000051232.14	ENSMUST00000148393.2	562	3	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_2	29	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTAAGGCCTATGTTCC	1720	False	NA	NA	False	NA	NA	NA	78402909	78400339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_78400641_78401173_78401248_78402722
ENSMUST00000148403.2	chr7	+	343	4	FSM	ENSMUSG00000035674.14	ENSMUST00000148403.2	343	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	1620.57650921585	19569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTCTTTCGTGGGTT	273	False	NA	22	True	AATAAA	-24	NA	3620389	3623162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3620417_3620615_3620691_3622428_3622507_3622999
ENSMUST00000148418.8	chr12	+	1168	5	FSM	ENSMUSG00000047022.19	ENSMUST00000148418.8	1168	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	7.69740215917033	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATTGTATGTATTTCTT	NA	False	NA	NA	False	NA	NA	NA	57277221	57372861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309
ENSMUST00000148443.3	chr1	+	2056	12	FSM	ENSMUSG00000049439.14	ENSMUST00000148443.3	2056	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	29.4898777983562	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGATTGTTTTGTTT	NA	False	NA	28	True	AATAAA	-16	NA	60382481	60427219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_60382617_60391279_60391330_60393672_60393816_60402348_60402517_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
ENSMUST00000148482.8	chr17	-	1193	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148482.8	1193	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	123.227269709265	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGTTTTCACGTCACTT	NA	False	NA	-3	True	AATAAA	-19	NA	36208012	36203568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207871
ENSMUST00000148496.2	chr11	+	388	2	FSM	ENSMUSG00000086468.2	ENSMUST00000148496.2	388	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAAGGGCTATGCT	NA	False	NA	NA	False	NA	NA	NA	17904003	17905098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_17904086_17904792
ENSMUST00000148500.2	chr2	+	1468	3	FSM	ENSMUSG00000027425.19	ENSMUST00000148500.2	1468	3	0	0	0	0	multi-exon	FALSE	canonical	1	121	junction_2	118	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCACTCAGCTTGTCTT	NA	False	NA	39	True	AATAAA	-45	NA	144244266	144249595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_144244491_144245918_144246110_144248542
ENSMUST00000148508.2	chr1	-	649	3	FSM	ENSMUSG00000073616.11	ENSMUST00000148508.2	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	285.5	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGCTTTTAGATGCA	NA	False	NA	-19	True	AATAAA	-30	NA	92569645	92564866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_92565126_92567408_92567482_92569328
ENSMUST00000148535.2	chr11	+	966	2	FSM	ENSMUSG00000018286.7	ENSMUST00000148535.2	966	2	0	0	0	0	multi-exon	FALSE	canonical	3	6021	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGGGGTATGATGGTAAG	NA	False	NA	NA	False	NA	NA	NA	70416935	70418019	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70417252_70417369
ENSMUST00000148553.2	chr1	+	386	3	FSM	ENSMUSG00000025967.17	ENSMUST00000148553.2	386	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	1495	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGATGCTAAGGATGAT	NA	False	NA	NA	False	NA	NA	NA	63216289	63217668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_63216451_63216881_63217036_63217597
ENSMUST00000148555.8	chr2	-	2038	13	FSM	ENSMUSG00000039648.15	ENSMUST00000148555.8	2038	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	50.7807788439681	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	False	NA	-5	True	AATAAA	-23	NA	30095828	30075137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30082199_30082298_30084065_30084125_30095644
ENSMUST00000148573.2	chr8	+	1118	3	FSM	ENSMUSG00000003812.14	ENSMUST00000148573.2	1118	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	1.5	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATATAGAGTGGGGGTG	NA	False	NA	4	True	AATAAA	-16	NA	85640019	85649544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85640158_85647022_85647134_85648675
ENSMUST00000148592.2	chr8	+	798	3	FSM	ENSMUSG00000059355.14	ENSMUST00000148592.2	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_2	13.5	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGCTTCTCTTTTGTTC	NA	False	NA	36	True	TATAAA	-25	NA	85807601	85808968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85807908_85808405_85808504_85808574
ENSMUST00000148601.2	chr11	-	3538	13	FSM	ENSMUSG00000020777.17	ENSMUST00000148601.2	3538	13	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_12	27.5116137092845	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	6553	False	NA	1	True	AATAAA	-15	NA	116080401	116062713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116080240
ENSMUST00000148629.2	chr2	+	481	5	FSM	ENSMUSG00000039001.13	ENSMUST00000148629.2	481	5	0	0	0	0	multi-exon	FALSE	canonical	3	5195	junction_1	969.972422288386	160148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGCTTTTGCTGTTTT	NA	False	NA	23	True	AATAAA	-24	NA	179899171	179900235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022
ENSMUST00000148721.8	chr17	-	1293	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148721.8	1293	6	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_5	90.4765162901402	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGTTTTCACGTCACTT	NA	False	NA	-3	True	AATAAA	-19	NA	36208323	36203568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36208082
ENSMUST00000148762.4	chr4	+	2800	4	FSM	ENSMUSG00000078498.6	ENSMUST00000148762.4	2800	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	71.5976411777806	2833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	147390130	147418191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_147390233_147409230_147409335_147413438_147413566_147415724
ENSMUST00000148776.2	chr7	-	1133	4	FSM	ENSMUSG00000086477.4	ENSMUST00000148776.2	1133	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8.17856276425687	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACACCCTCTAATTGGA	9364	False	NA	NA	False	AATAAA	-21	NA	98352135	98331542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_98332125_98342226_98342478_98342554_98342809_98352089
ENSMUST00000148807.11	chr19	+	937	7	FSM	ENSMUSG00000024845.20	ENSMUST00000148807.11	937	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	194.337907321815	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGCACTTTCCTGGGCC	4390	False	NA	NA	False	AATAAA	-24	NA	4175978	4181734	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
ENSMUST00000148879.8	chr5	-	1351	9	FSM	ENSMUSG00000029730.17	ENSMUST00000148879.8	1351	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	677.704719992417	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2320	False	NA	-25	True	AATAAA	-15	NA	138170080	138162861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_138163166_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ENSMUST00000148889.2	chr9	+	769	2	FSM	ENSMUSG00000033543.18	ENSMUST00000148889.2	769	2	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGAGTAATACTTGAT	NA	False	NA	17	True	AATAAA	-15	NA	69926329	69930019	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_69926798_69929718
ENSMUST00000148894.2	chr17	+	1672	10	FSM	ENSMUSG00000024188.17	ENSMUST00000148894.2	1672	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	196.74976273379	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTACATTAGTGTATT	NA	False	NA	17	True	ATTAAA	-29	NA	26471972	26499697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ENSMUST00000148933.8	chr7	-	1140	6	FSM	ENSMUSG00000089832.9	ENSMUST00000148933.8	1140	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	134.483604948707	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACTGTTTATAGTCTTG	NA	False	NA	-33	True	AATAAA	-12	NA	27045027	27041562	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27044841
ENSMUST00000148936.2	chr2	+	998	2	FSM	ENSMUSG00000027282.18	ENSMUST00000148936.2	998	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAAAGCAAGA	131	False	NA	NA	False	NA	NA	NA	90677533	90678658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_90677730_90677856
ENSMUST00000148966.2	chr16	+	2315	5	FSM	ENSMUSG00000022679.14	ENSMUST00000148966.2	2315	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	78.6431815226215	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGATTTGGGTATTGTCA	521	False	NA	9	True	NA	NA	NA	13758558	13766446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13758888_13759983_13760038_13762529_13762601_13764421_13764452_13764615
ENSMUST00000148968.8	chrX	-	1316	3	FSM	ENSMUSG00000041353.13	ENSMUST00000148968.8	1316	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	83.5	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGACTTGAGAGGTATT	NA	False	NA	NA	False	GATAAA	-21	NA	149242150	149191573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_149192597_149203337_149203438_149241957
ENSMUST00000149027.8	chr17	+	493	2	FSM	ENSMUSG00000000579.15	ENSMUST00000149027.8	493	2	0	0	0	0	multi-exon	FALSE	canonical	3	5304	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAACAACCACATGGTGG	NA	False	NA	NA	False	NA	NA	NA	6869190	6871333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_6869236_6870885
ENSMUST00000149076.8	chr11	+	1316	5	FSM	ENSMUSG00000032615.15	ENSMUST00000149076.8	1316	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	25.0337272494529	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCTGTGGCCTTCTC	2645	False	NA	6	True	AATAAA	-16	NA	59730272	59767359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_59730583_59743616_59743718_59751575_59751637_59765378_59765494_59766630
ENSMUST00000149085.8	chr5	-	2552	9	FSM	ENSMUSG00000028959.15	ENSMUST00000149085.8	2552	9	0	0	0	0	multi-exon	FALSE	canonical	3	1095	junction_1	118.721049102508	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650185	24646037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892
ENSMUST00000149105.2	chr8	+	2093	11	FSM	ENSMUSG00000002342.18	ENSMUST00000149105.2	2093	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	65.1644841919278	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCAGTGTGGTCTGGCCC	7764	False	NA	24	True	AATAAA	-34	NA	70626952	70635517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70627057_70629494_70629576_70629890_70629989_70630176_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUST00000149143.8	chr7	+	350	3	FSM	ENSMUSG00000046364.15	ENSMUST00000149143.8	350	3	0	0	0	0	multi-exon	FALSE	canonical	3	7451	junction_1	4486.5	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAACTGCTGACCTTATT	NA	False	NA	NA	False	NA	NA	NA	109118405	109119386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_109118430_109118791_109118856_109119124
ENSMUST00000149191.2	chr2	-	1697	2	FSM	ENSMUSG00000016252.8	ENSMUST00000149191.2	1697	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGTTTTGTTTCTGTT	NA	False	NA	-7	True	AATAAA	-19	NA	174305842	174302867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_174303015_174304292
ENSMUST00000149205.2	chr19	+	919	7	FSM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	53.7297765572209	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATCAGCCTAAAACCCT	NA	False	NA	20	True	AATAAA	-22	NA	6458434	6465241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6458601_6458868_6458985_6463114_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
ENSMUST00000149267.8	chr8	+	1000	7	FSM	ENSMUSG00000038005.16	ENSMUST00000149267.8	1000	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	318.3514829032	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACGGCTCTTCTAGTGTT	NA	False	NA	15	True	AATAAA	-28	NA	61343478	61360607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_61343571_61346734_61346895_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ENSMUST00000149277.8	chr17	-	1388	12	FSM	ENSMUSG00000024426.18	ENSMUST00000149277.8	1388	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	38.3140567174602	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCTACCGACAAAAAGTG	NA	False	NA	-15	True	AATAAA	-21	NA	36220949	36208503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36208808_36209148_36209243_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ENSMUST00000149303.8	chr2	+	1329	6	FSM	ENSMUSG00000044349.17	ENSMUST00000149303.8	1329	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.86781592116274	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAAAATAAATAATT	NA	False	NA	NA	False	NA	NA	NA	158217617	158223510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_158217809_158218000_158218247_158218664_158218745_158218913_158218993_158222690_158222772_158222858
ENSMUST00000149322.8	chr9	-	2188	14	FSM	ENSMUSG00000032527.14	ENSMUST00000149322.8	2188	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	26.8991102116318	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTGTTGTTTTTTTAT	NA	False	NA	0	True	NA	NA	NA	100916930	100864084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
ENSMUST00000149386.8	chr9	-	819	4	FSM	ENSMUSG00000087135.8	ENSMUST00000149386.8	819	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	4.78423336480244	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGACTGCCGGTGAC	NA	False	NA	NA	False	AATAAA	-29	NA	40695477	40692037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_40692492_40694218_40694287_40694531_40694743_40695391
ENSMUST00000149472.3	chr4	-	1009	2	FSM	ENSMUSG00000085085.3	ENSMUST00000149472.3	1009	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCCTTATGACTTACAC	NA	False	NA	-18	True	AATAAA	-16	NA	128951776	128943889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_128944703_128951580
ENSMUST00000149514.8	chrX	+	775	3	FSM	ENSMUSG00000086316.9	ENSMUST00000149514.8	775	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	3	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGACCCCTTTCTT	NA	False	NA	NA	False	AGTAAA	-20	NA	152506622	152512184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_152506934_152508700_152508838_152511857
ENSMUST00000149553.2	chr5	+	770	3	FSM	ENSMUSG00000029131.15	ENSMUST00000149553.2	770	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	23.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCACCACCATGTTGTAT	NA	False	NA	4	True	AATAAA	-12	NA	29959337	29962958	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_29959590_29961231_29961337_29962545
ENSMUST00000149564.8	chr12	+	5763	30	FSM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_27	23.3199327353747	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCTGTTTCTTAGAAG	NA	False	NA	22	True	AATAAA	-20	NA	71183621	71290077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ENSMUST00000149566.2	chr1	-	838	6	FSM	ENSMUSG00000043716.14	ENSMUST00000149566.2	838	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	2771.11529893651	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCAACAGGGAAGACC	NA	False	NA	NA	False	AAAAAG	-27	NA	16174451	16172003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174360
ENSMUST00000149595.8	chrX	+	837	6	FSM	ENSMUSG00000043384.16	ENSMUST00000149595.8	837	6	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_5	28.5629130167075	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATAGATTCTTCTCTC	NA	False	NA	NA	False	TTTAAA	-17	NA	134643481	134662739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134662477
ENSMUST00000149615.8	chr2	-	542	3	FSM	ENSMUSG00000009549.15	ENSMUST00000149615.8	542	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	715	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTGGTTTGTTTTTCTT	NA	False	NA	-3	True	ATTAAA	-15	NA	118309364	118306331	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_118306789_118307307_118307341_118309312
ENSMUST00000149689.2	chr2	-	588	7	FSM	ENSMUSG00000078867.10	ENSMUST00000149689.2	588	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	128.500324253806	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	177090113	177079693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177085086_177085189_177086489_177086545_177090016
ENSMUST00000149719.8	chr2	-	3303	9	FSM	ENSMUSG00000058835.15	ENSMUST00000149719.8	3303	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	106.193220122567	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTTGAAATTATTTC	NA	False	NA	-22	True	AATAAA	-12	NA	22930253	22830097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_22832060_22836587_22836774_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ENSMUST00000149761.2	chrX	+	1050	9	FSM	ENSMUSG00000046774.18	ENSMUST00000149761.2	1050	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	125.554768925756	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGTACTTTTGCAACT	NA	False	NA	NA	False	NA	NA	NA	100838291	100842246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_100838373_100838725_100838791_100839359_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841772_100841947_100841990_100842072
ENSMUST00000149778.2	chr5	+	1475	3	FSM	ENSMUSG00000040532.15	ENSMUST00000149778.2	1475	3	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_1	28.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGATCCGTTTTCACC	NA	False	NA	10	True	AATAAA	-17	NA	135038559	135041024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135038972_135039740_135040520_135040740
ENSMUST00000149796.2	chr4	-	1803	8	FSM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_7	582.015218259552	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCGTCTACACGAGTC	NA	False	NA	-13	True	ATTAAA	-22	NA	155170828	155158566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167775_155170661
ENSMUST00000149822.3	chr11	+	600	2	FSM	ENSMUSG00000086859.5	ENSMUST00000149822.3	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_1	0	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCATTGTTCAAT	875	False	NA	20	True	AATAAA	-16	NA	116967608	116969781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116968029_116969601
ENSMUST00000149884.2	chr3	-	1928	4	FSM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_3	50.1663898109747	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTACTGAGGTTATAG	NA	False	NA	NA	False	AATAAA	-12	NA	90398340	90395340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398138
ENSMUST00000149918.2	chr6	-	1966	4	FSM	ENSMUSG00000068335.7	ENSMUST00000149918.2	1966	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	15.121728296285	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGGCCTCTGCGTATG	NA	False	NA	-10	True	ATTAAA	-13	NA	83010449	83007920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_83009397_83009515_83009610_83009747_83010046_83010351
ENSMUST00000149936.2	chr9	+	3158	4	FSM	ENSMUSG00000015656.18	ENSMUST00000149936.2	3158	4	0	0	0	0	multi-exon	FALSE	canonical	3	3928	junction_2	5585.07877195021	1781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTTGTCCTGACTGAG	2459	False	NA	9	True	AATAAA	-19	NA	40712571	40716495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_40712645_40713213_40713920_40714034_40714188_40714269
ENSMUST00000149940.2	chr11	+	1752	3	FSM	ENSMUSG00000085148.2	ENSMUST00000149940.2	1752	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	6.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAAAATTTTTACTCT	3838	False	NA	8	True	AATAAA	-19	NA	75352364	75357502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_75352582_75354518_75354684_75356132
ENSMUST00000149957.2	chr11	-	585	2	FSM	ENSMUSG00000020773.12	ENSMUST00000149957.2	585	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCGGAGGCTCAAAG	NA	False	NA	NA	False	NA	NA	NA	115997909	115997034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115997468_115997757
ENSMUST00000150006.9	chr14	-	3568	15	FSM	ENSMUSG00000048922.19	ENSMUST00000150006.9	3568	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	140.480734389787	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGGTAATCTGAGTTTC	NA	False	NA	-10	True	ATTAAA	-40	NA	67953290	67913779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67953200
ENSMUST00000150027.2	chr11	-	903	2	FSM	ENSMUSG00000025574.14	ENSMUST00000150027.2	903	2	0	0	0	0	multi-exon	FALSE	canonical	3	985	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCAGCCCGCCTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	117716643	117715659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_117716459_117716539
ENSMUST00000150050.3	chr7	+	2090	3	FSM	ENSMUSG00000074365.14	ENSMUST00000150050.3	2090	3	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	3	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATCTGTGCCTGCTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	15630095	15634223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_15630183_15631328_15631478_15632369
ENSMUST00000150077.2	chr4	+	1559	10	FSM	ENSMUSG00000028745.19	ENSMUST00000150077.2	1559	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	758.63675655419	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATCGGCGCTGGCTGTAC	NA	False	NA	4	True	NA	NA	NA	138920279	139019125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989348_139007399_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139016171_139016285_139018313
ENSMUST00000150091.8	chr2	-	2356	12	FSM	ENSMUSG00000026669.15	ENSMUST00000150091.8	2356	12	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_5	75.7261268056919	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	6372	False	NA	0	True	AATAAA	-38	NA	5006369	4995534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074
ENSMUST00000150095.8	chrX	-	2807	5	FSM	ENSMUSG00000039231.19	ENSMUST00000150095.8	2807	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	11.6054943884352	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGGGAGATTGAGGTC	6992	False	NA	NA	False	NA	NA	NA	7940860	7927664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_7929223_7929934_7930297_7936826_7937490_7938561_7938708_7940782
ENSMUST00000150103.3	chr17	+	1022	5	FSM	ENSMUSG00000037805.16	ENSMUST00000150103.3	1022	5	0	0	0	0	multi-exon	FALSE	canonical	3	5482	junction_3	1550.72344004339	5598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCCTTGGTGTGCCTGT	NA	False	NA	-4	True	AATAAA	-15	NA	28547573	28550002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_28547593_28547784_28547860_28547940_28548497_28549498_28549672_28549803
ENSMUST00000150128.8	chr8	-	793	5	FSM	ENSMUSG00000014633.16	ENSMUST00000150128.8	793	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	168.345440983711	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCCCTTTCTTTAAC	NA	False	NA	-5	True	AATAAA	-15	NA	117648186	117616256	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_117616599_117620826_117620899_117623078_117623254_117637866_117637974_117648089
ENSMUST00000150157.3	chr17	+	2110	3	FSM	ENSMUSG00000071172.14	ENSMUST00000150157.3	2110	3	0	0	0	0	multi-exon	FALSE	canonical	3	1932	junction_1	120.5	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGCCTGTTTTTCCTTG	NA	False	NA	37	True	ATTAAA	-28	NA	29258491	29261084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29259788_29260180_29260268_29260357
ENSMUST00000150165.8	chr2	-	975	4	FSM	ENSMUSG00000026939.13	ENSMUST00000150165.8	975	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	9.10433352249844	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAGCTCTGAAGCAAT	NA	False	NA	-6	True	AATAAA	-18	NA	25511975	25510115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_25510543_25511077_25511186_25511386_25511471_25511619
ENSMUST00000150204.8	chr4	-	935	7	FSM	ENSMUSG00000033379.14	ENSMUST00000150204.8	935	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	972.524449849748	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCAGTGAGGCTTCTGT	NA	False	NA	-8	True	AATAAA	-14	NA	117744517	117741529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117744366
ENSMUST00000150268.8	chr3	+	1851	15	FSM	ENSMUSG00000027998.12	ENSMUST00000150268.8	1851	15	0	0	0	0	multi-exon	TRUE	canonical	3	670	junction_6	49.0312790627637	2465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGCATGTTGAGGATTG	NA	False	NA	7	True	AATAAA	-40	NA	82962828	82979662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
ENSMUST00000150312.2	chr11	-	696	2	FSM	ENSMUSG00000086474.3	ENSMUST00000150312.2	696	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGATTTTGGTCTTGGT	1414	False	NA	NA	False	NA	NA	NA	79673713	79672804	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_79673383_79673595
ENSMUST00000150318.2	chr8	-	895	6	FSM	ENSMUSG00000032815.17	ENSMUST00000150318.2	895	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	15.8795465930234	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTGCATGTCTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	124045299	124039021	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ENSMUST00000150326.2	chr2	+	2059	2	FSM	ENSMUSG00000039463.15	ENSMUST00000150326.2	2059	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAAACCCATGAG	NA	False	NA	NA	False	ACTAAA	-7	NA	167263642	167268054	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_167263686_167266038
ENSMUST00000150350.9	chr7	-	1047	8	FSM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	0	0	0	0	multi-exon	FALSE	canonical	3	11064	junction_7	2170.0381732747	182648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATGTGTGCTGTGCAGA	NA	False	NA	-1	True	AATAAA	-19	NA	44778185	44774981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ENSMUST00000150395.8	chr9	+	3425	23	FSM	ENSMUSG00000035919.17	ENSMUST00000150395.8	3425	23	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	19.2294217582595	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATAACTGGACTGAAT	NA	False	NA	-3	True	AATAAA	-14	NA	22387017	22799570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_22387352_22387865_22387922_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ENSMUST00000150401.8	chr2	+	1005	6	FSM	ENSMUSG00000027405.17	ENSMUST00000150401.8	1005	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	967.657501391892	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACCCCAATAAAAACAC	NA	False	NA	-3	True	NA	NA	NA	130119137	130121199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
ENSMUST00000150459.3	chr10	+	1194	6	FSM	ENSMUSG00000087651.4	ENSMUST00000150459.3	1194	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	8.16333265278342	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTCTTAATTATTT	NA	False	NA	6	True	ATTAAA	-19	NA	83558728	83598626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_83558899_83573772_83573798_83593308_83593345_83593997_83594078_83595456_83595495_83597781
ENSMUST00000150485.2	chr4	+	576	4	FSM	ENSMUSG00000028936.16	ENSMUST00000150485.2	576	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2633.7473092324	10360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACCGGTGGTTTATC	NA	False	NA	9	True	AATAAA	-8	NA	152411936	152416930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_152412043_152413716_152413871_152414463_152414586_152416736
ENSMUST00000150497.8	chr7	+	782	4	FSM	ENSMUSG00000035674.14	ENSMUST00000150497.8	782	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1418.73472581107	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACCCCACAATCTTTTC	262	False	NA	11	True	AATAAA	-13	NA	3620378	3623151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3620407_3620615_3621140_3622428_3622507_3622999
ENSMUST00000150529.2	chr4	+	545	3	FSM	ENSMUSG00000085101.8	ENSMUST00000150529.2	545	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	10.5	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTCATACAGGAGAGAA	NA	False	NA	67	True	NA	NA	NA	145136835	145176326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_145136997_145138756_145138851_145176036
ENSMUST00000150545.8	chr2	-	1299	5	FSM	ENSMUSG00000027472.15	ENSMUST00000150545.8	1299	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	103.576964137785	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGTTGTCACCCACC	8639	False	NA	NA	False	AATAAA	-21	NA	152857347	152850809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857127
ENSMUST00000150571.2	chr2	+	2151	8	FSM	ENSMUSG00000017999.17	ENSMUST00000150571.2	2151	8	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_7	28.1497453499193	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATAGTATTATTTCCCAT	NA	False	NA	NA	False	NA	NA	NA	166857229	166867733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303
ENSMUST00000150576.8	chr9	+	733	4	FSM	ENSMUSG00000048758.15	ENSMUST00000150576.8	733	4	0	0	0	0	multi-exon	FALSE	canonical	3	2142	junction_1	1217.38161642108	125667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	3	True	AATAAA	-19	NA	106306652	106308767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_106306776_106307168_106307214_106307506_106307572_106308267
ENSMUST00000150627.11	chr19	+	1472	6	FSM	ENSMUSG00000024845.20	ENSMUST00000150627.11	1472	6	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_4	186.716255318063	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATCTGAGCTCACAGCA	4371	False	NA	NA	False	AATAAA	-30	NA	4175959	4182306	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181227_4181282_4181360
ENSMUST00000150680.2	chr8	-	1796	8	FSM	ENSMUSG00000031750.16	ENSMUST00000150680.2	1796	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	19.7411824801425	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGCATCTCTGATG	5061	False	NA	-23	True	ATTAAA	-16	NA	111532504	111468471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_111469081_111469275_111469412_111473449_111473568_111474874_111475037_111475294_111475373_111476056_111476191_111481862_111482283_111532365
ENSMUST00000150739.2	chr11	-	928	5	FSM	ENSMUSG00000020460.16	ENSMUST00000150739.2	928	5	0	0	0	0	multi-exon	FALSE	canonical	3	7569	junction_4	3562.36217277244	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACCAGAAGACAAGTAGT	NA	False	NA	-84	True	NA	NA	NA	29497882	29495898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_29496030_29496290_29496423_29496702_29497261_29497680_29497746_29497840
ENSMUST00000150745.9	chr2	+	3627	5	FSM	ENSMUSG00000027405.17	ENSMUST00000150745.9	3627	5	0	0	0	0	multi-exon	FALSE	canonical	3	1993	junction_1	249.795291188605	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTATTTTGTTTATT	NA	False	NA	30	True	AATAAA	-19	NA	130116363	130121232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130118095_130118355
ENSMUST00000150749.2	chr1	-	711	2	FSM	ENSMUSG00000087213.3	ENSMUST00000150749.2	711	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	769	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACAGTGCTACCTATGT	7927	False	NA	-16	True	AATAAA	-21	NA	64729818	64719029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_64719545_64729622
ENSMUST00000150757.8	chr2	+	1825	4	FSM	ENSMUSG00000027569.16	ENSMUST00000150757.8	1825	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	3.55902608401044	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCTTGGAAGTTGTATG	NA	False	NA	NA	False	ATTAAA	-20	NA	180224515	180228097	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_180224749_180225193_180225316_180226198_180226665_180227093
ENSMUST00000150810.8	chr5	+	1120	4	FSM	ENSMUSG00000029177.10	ENSMUST00000150810.8	1120	4	0	0	0	0	multi-exon	FALSE	canonical	3	1270	junction_1	232.020592955788	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGGCAGTCCCGCCATA	9224	False	NA	40	True	AATAAA	-24	NA	30824278	30831753	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_30824458_30829807_30829915_30830325_30830788_30831381
ENSMUST00000150815.6	chr5	-	387	4	FSM	ENSMUSG00000047215.15	ENSMUST00000150815.6	387	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	5373.73491055233	2181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548176	65545706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65545785_65545904_65546023_65547730_65547827_65548081
ENSMUST00000150826.9	chr9	+	2939	8	FSM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	12.4638252063927	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGCTTTCTGATGTC	NA	False	NA	NA	False	NA	NA	NA	72892859	72921220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
ENSMUST00000150838.2	chr5	+	2167	10	FSM	ENSMUSG00000007207.11	ENSMUST00000150838.2	2167	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	7.53428378140653	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTCTGTTTGGAACA	NA	False	NA	15	True	AATAAA	-15	NA	135052413	135079954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135052465_135065979_135066058_135066329_135066430_135070090_135070166_135070784_135070859_135070962_135071072_135071446_135071521_135074450_135074589_135077764_135077959_135078680
ENSMUST00000150841.2	chr7	+	451	4	FSM	ENSMUSG00000019738.16	ENSMUST00000150841.2	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	1146	junction_3	51.8609251320834	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTTCCCGTGTTTAT	NA	False	NA	15	True	AATAAA	-15	NA	29932027	29932812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_29932249_29932331_29932407_29932491_29932544_29932709
ENSMUST00000150844.3	chr7	-	3564	9	FSM	ENSMUSG00000030929.18	ENSMUST00000150844.3	3564	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	8.7571399440685	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGATTTGTGTGTTTGA	NA	False	NA	-4	True	AATAAA	-32	NA	119393281	119383053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
ENSMUST00000150857.8	chr11	+	2571	12	FSM	ENSMUSG00000006127.10	ENSMUST00000150857.8	2571	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41.3619380270723	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTCGTGTGACTCCTTT	5506	False	NA	21	True	TATAAA	-12	NA	75521880	75539691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_75522024_75523929_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ENSMUST00000150876.2	chr2	-	562	5	FSM	ENSMUSG00000039128.14	ENSMUST00000150876.2	562	5	0	0	0	0	multi-exon	FALSE	canonical	3	1033	junction_1	96.4507646418627	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTCTCAGTTGAGCAAG	NA	False	NA	NA	False	TTTAAA	-5	NA	5849662	5827626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ENSMUST00000150891.8	chr7	+	1699	6	FSM	ENSMUSG00000030990.19	ENSMUST00000150891.8	1699	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	72.2290800162926	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	659	False	NA	9	True	AATAAA	-16	NA	101872299	101887767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_101872358_101875628_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ENSMUST00000150911.8	chr1	-	960	6	FSM	ENSMUSG00000026049.12	ENSMUST00000150911.8	960	6	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_5	82.045353311446	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACGGTTGGTTAATTTGA	NA	False	NA	NA	False	AATAAA	-1	NA	44141601	44126020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141487
ENSMUST00000150955.2	chr11	-	480	2	FSM	ENSMUSG00000071415.7	ENSMUST00000150955.2	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	13439	junction_1	0	10540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAAAGTCTCTGCTCTG	NA	False	NA	-53	True	AATATA	-2	NA	97669461	97668881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97668991_97669090
ENSMUST00000150971.8	chr1	+	877	8	FSM	ENSMUSG00000025903.15	ENSMUST00000150971.8	877	8	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_6	40.2700070696263	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAAAATCTGATCGCC	NA	False	NA	NA	False	AATAAA	-34	NA	4878052	4911509	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178
ENSMUST00000151017.2	chr1	-	1229	2	FSM	ENSMUSG00000043716.14	ENSMUST00000151017.2	1229	2	0	0	0	0	multi-exon	FALSE	canonical	3	6432	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCAAGTGCTGGGATT	NA	False	NA	NA	False	NA	NA	NA	16173072	16171751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16172824_16172915
ENSMUST00000151020.8	chrX	+	3316	12	FSM	ENSMUSG00000000881.13	ENSMUST00000151020.8	3316	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	11.5078126534158	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGGCTCAGAGGTCTT	699	False	NA	NA	False	AATAAA	-15	NA	99820890	99862014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_99820979_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ENSMUST00000151066.8	chr15	-	704	5	FSM	ENSMUSG00000055762.17	ENSMUST00000151066.8	704	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1645.62410273428	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75772980_75773102_75781093
ENSMUST00000151118.2	chr11	-	728	5	FSM	ENSMUSG00000071415.7	ENSMUST00000151118.2	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	6071.74712809254	138849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCTGGTCTTCTTGAC	NA	False	NA	-35	True	ATTAAA	-11	NA	97673102	97668863	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97672828
ENSMUST00000151120.9	chr7	-	2127	9	FSM	ENSMUSG00000007891.17	ENSMUST00000151120.9	2127	9	0	0	0	0	multi-exon	FALSE	canonical	3	1941	junction_4	107.727593377927	5650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTGCTCTGTACTGT	8684	False	NA	-2	True	AATAAA	-23	NA	141941775	141929647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ENSMUST00000151231.10	chrX	+	1940	6	FSM	ENSMUSG00000046774.18	ENSMUST00000151231.10	1940	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	112.716280989039	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838261	100842248	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841947_100841990_100842072
ENSMUST00000151242.8	chr10	+	1657	12	FSM	ENSMUSG00000000730.14	ENSMUST00000151242.8	1657	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	3.67029622512479	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTAGTGTTCTGGTGTGG	5708	False	NA	23	True	AATATA	-15	NA	77885792	77899450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_77886038_77886431_77886519_77886749_77886795_77887664_77887745_77887825_77887939_77888545_77888718_77889762_77889851_77890805_77890901_77892678_77892755_77893101_77893242_77895480_77895567_77899020
ENSMUST00000151249.2	chr4	+	673	4	FSM	ENSMUSG00000028261.14	ENSMUST00000151249.2	673	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	218.397700435594	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTGCACATTAGCCCA	56	False	NA	-6	True	AATAAA	-7	NA	24898175	24903485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_24898303_24898572_24898677_24901693_24901782_24903131
ENSMUST00000151254.2	chr7	+	1430	5	FSM	ENSMUSG00000030663.13	ENSMUST00000151254.2	1430	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	766.33690371794	5945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	False	NA	29	True	AATAAA	-20	NA	115692600	115704445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702429_115702556_115703446
ENSMUST00000151258.8	chr7	-	1440	12	FSM	ENSMUSG00000030760.15	ENSMUST00000151258.8	1440	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	85.8415800151892	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTACTGGCAAAATACC	NA	False	NA	-48	True	ATTAAA	-16	NA	97958735	97865649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97879656_97879821_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ENSMUST00000151266.8	chr16	+	1086	5	FSM	ENSMUSG00000003531.16	ENSMUST00000151266.8	1086	5	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	38.8546972707291	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTTCCTAGTGACTCT	NA	False	NA	30	True	AATAAA	-36	NA	17884266	17889227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887954_17888096_17888741
ENSMUST00000151287.8	chr17	+	2446	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	0	0	0	0	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	10787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCCAAGTGCTGGAATT	NA	False	NA	20	True	NA	NA	NA	13135268	13143954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUST00000151289.9	chr19	-	3262	6	FSM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	43.4069118920017	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGCTATTATATTGTGT	8019	False	NA	-2	True	AATAAA	-17	NA	32188413	32100127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32188227
ENSMUST00000151296.8	chr1	+	1592	7	FSM	ENSMUSG00000026096.15	ENSMUST00000151296.8	1592	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	65.9858991670864	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCGTGTTTCAAGTGTTT	NA	False	NA	18	True	AATAAA	-38	NA	53352812	53365333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_53353018_53354014_53354259_53357065_53357449_53359101_53359456_53360238_53360370_53362325_53362430_53365162
ENSMUST00000151306.2	chr17	-	764	3	FSM	ENSMUSG00000023944.15	ENSMUST00000151306.2	764	3	0	0	0	0	multi-exon	FALSE	canonical	3	10174	junction_2	18	2008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGCAGCAGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	45884197	45881943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45882104_45882338_45882838_45884092
ENSMUST00000151338.8	chr1	-	1538	11	FSM	ENSMUSG00000026034.18	ENSMUST00000151338.8	1538	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	69.2961759406679	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	-12	True	AATAAA	-20	NA	58463225	58451158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456425_58456543_58458825_58458893_58460241_58460468_58460932_58461094_58463078
ENSMUST00000151374.2	chr4	-	426	3	FSM	ENSMUSG00000085241.8	ENSMUST00000151374.2	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	490.5	4813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	-10	True	ATTAAA	-14	NA	132080944	132079244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132079555_132079930_132080010_132080907
ENSMUST00000151488.2	chr17	+	1570	8	FSM	ENSMUSG00000071074.10	ENSMUST00000151488.2	1570	8	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_7	7.73542078324622	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGATTGAAGTCTAGACC	2645	False	NA	7	True	ATTAAA	-2	NA	46559070	46562927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562414_46562491
ENSMUST00000151531.2	chr11	+	520	3	FSM	ENSMUSG00000025142.19	ENSMUST00000151531.2	520	3	0	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_1	20.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	899	False	NA	16	True	AATAAA	-20	NA	120599585	120600273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120599826_120599896_120600073_120600169
ENSMUST00000151540.2	chr17	-	490	2	FSM	ENSMUSG00000096549.10	ENSMUST00000151540.2	490	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGTGTGACCATGCACC	NA	False	NA	NA	False	ATTAAA	-16	NA	48005661	48003140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_48003405_48005435
ENSMUST00000151559.2	chr11	-	510	3	FSM	ENSMUSG00000059534.9	ENSMUST00000151559.2	510	3	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	31	31070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGGCTTTTGCACGAGTC	NA	False	NA	-8	True	AATAAA	-17	NA	4654334	4651974	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_4652221_4653903_4653990_4654156
ENSMUST00000151624.2	chr9	+	1112	7	FSM	ENSMUSG00000032076.21	ENSMUST00000151624.2	1112	7	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_2	18.6904610251682	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCAGTTGGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	47441670	47725352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070
ENSMUST00000151658.8	chr9	-	2240	11	FSM	ENSMUSG00000039048.16	ENSMUST00000151658.8	2240	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	63.8767563359318	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122297	35115503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121235_35121462_35122102
ENSMUST00000151678.8	chr11	-	4084	3	FSM	ENSMUSG00000003518.14	ENSMUST00000151678.8	4084	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTCTGTTTTGTGTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	101874329	101861968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_101865766_101872442_101872670_101874269
ENSMUST00000151698.8	chr4	+	2600	8	FSM	ENSMUSG00000028581.18	ENSMUST00000151698.8	2600	8	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_4	26.2071808199702	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTCATGTGGTTCTTG	NA	False	NA	22	True	AATAAA	-18	NA	130640435	130663452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ENSMUST00000151702.8	chrX	+	648	7	FSM	ENSMUSG00000008682.14	ENSMUST00000151702.8	648	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	3469.80780767786	8009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGTGGTCCTCTGGACAA	NA	False	NA	-98	True	AATATA	-6	NA	73314462	73316631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73314485_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ENSMUST00000151767.2	chr5	+	815	2	FSM	ENSMUSG00000058558.13	ENSMUST00000151767.2	815	2	0	0	0	0	multi-exon	FALSE	canonical	3	8146	junction_1	0	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGCTGTTATT	NA	False	NA	3	True	AATAAA	-21	NA	108054487	108055921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_108055144_108055762
ENSMUST00000151793.8	chr7	-	3302	26	FSM	ENSMUSG00000038644.15	ENSMUST00000151793.8	3302	26	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	286.751320833924	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACGGGACAAGGAATAAA	NA	False	NA	-42	True	NA	NA	NA	44198262	44182209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ENSMUST00000151843.8	chr4	-	3282	17	FSM	ENSMUSG00000029060.18	ENSMUST00000151843.8	3282	17	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_11	49.9677630452875	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	9509	False	NA	-5	True	TATAAA	-13	NA	155751566	155739138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470
ENSMUST00000151861.9	chr9	-	1668	3	FSM	ENSMUSG00000066892.15	ENSMUST00000151861.9	1668	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTTGCACTTATTTAA	NA	False	NA	-2	True	ATTAAA	-20	NA	20556051	20549082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20550495_20553319_20553393_20555868
ENSMUST00000151871.2	chr5	+	596	2	FSM	ENSMUSG00000041453.13	ENSMUST00000151871.2	596	2	0	0	0	0	multi-exon	FALSE	canonical	3	12138	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATAATACTTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	146770993	146771774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_146771073_146771257
ENSMUST00000151917.6	chr5	-	431	2	FSM	ENSMUSG00000047215.15	ENSMUST00000151917.6	431	2	0	0	0	0	multi-exon	FALSE	canonical	3	8565	junction_1	0	2166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65546257	65545706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65545785_65545904
ENSMUST00000151933.2	chr7	+	4069	8	FSM	ENSMUSG00000030386.20	ENSMUST00000151933.2	4069	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	49.3550237295753	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGGTTACCTAATTCC	NA	False	NA	21	True	AATAAA	-25	NA	12212289	12229489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12215044_12215109_12223496_12223624_12223875_12223972_12226283
ENSMUST00000151966.8	chr11	-	1734	11	FSM	ENSMUSG00000020528.15	ENSMUST00000151966.8	1734	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	65.5872701063248	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTATGTGGATAGTTG	292	False	NA	-7	True	AATAAA	-22	NA	61652838	61620479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61647020_61647172_61647407_61647504_61652779
ENSMUST00000152075.8	chr1	+	1038	9	FSM	ENSMUSG00000026418.17	ENSMUST00000152075.8	1038	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.2898077169369	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTCTGTAGCCCTGT	7353	False	NA	43	True	ATTAAA	-24	NA	135727158	135738727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_135727235_135730331_135730362_135731019_135731024_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ENSMUST00000152076.8	chr19	+	724	4	FSM	ENSMUSG00000071644.11	ENSMUST00000152076.8	724	4	0	0	0	0	multi-exon	FALSE	canonical	3	8704	junction_3	43.0116263352131	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGCCACCCTAGGCTAC	2018	False	NA	NA	False	NA	NA	NA	8945579	8947565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8945739_8946525_8946590_8946727_8946871_8947207
ENSMUST00000152094.2	chr11	-	447	3	FSM	ENSMUSG00000020303.3	ENSMUST00000152094.2	447	3	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	6	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGACATTTTCTTT	NA	False	NA	NA	False	AATACA	-22	NA	31320047	31317998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_31318328_31319711_31319794_31320011
ENSMUST00000152098.8	chr4	-	952	6	FSM	ENSMUSG00000055401.15	ENSMUST00000152098.8	952	6	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_5	226.118552976088	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTAGTAATCGGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	148236597	148230465	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236469
ENSMUST00000152105.8	chr5	+	585	4	FSM	ENSMUSG00000029651.17	ENSMUST00000152105.8	585	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	27.4752413799932	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCCTCCTCTGGA	NA	False	NA	15	True	ATTAAA	-23	NA	148239974	148250270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_148240187_148240292_148240413_148243439_148243538_148250115
ENSMUST00000152125.8	chr2	-	1046	7	FSM	ENSMUSG00000085385.8	ENSMUST00000152125.8	1046	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	38.7857362097632	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTCAACCCATGAATT	8350	False	NA	3	True	AATAAA	-32	NA	158203439	158197684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_158197962_158199117_158199184_158200124_158200261_158201101_158201353_158202446_158202520_158202862_158202991_158203324
ENSMUST00000152126.8	chr4	+	1519	5	FSM	ENSMUSG00000028797.21	ENSMUST00000152126.8	1519	5	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_2	194.785779768442	1475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGCTTAGCAAATGT	3196	False	NA	9	True	AATAAA	-9	NA	129494492	129502314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129494525_129494775_129495037_129495987_129496055_129500879_129500973_129501248
ENSMUST00000152140.3	chr6	-	610	2	FSM	ENSMUSG00000032641.19	ENSMUST00000152140.3	610	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCTATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	134874888	134873660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_134874177_134874794
ENSMUST00000152178.2	chr2	+	2784	6	FSM	ENSMUSG00000036202.17	ENSMUST00000152178.2	2784	6	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	215.141441846986	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	52002144	52012393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ENSMUST00000152225.2	chr1	+	2994	17	FSM	ENSMUSG00000039354.17	ENSMUST00000152225.2	2994	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	25.2319706671913	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTATTCCGTTTGTCAC	NA	False	NA	9	True	AATAAA	-16	NA	72622773	72672293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_72622897_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ENSMUST00000152233.9	chr1	+	2739	13	FSM	ENSMUSG00000026199.18	ENSMUST00000152233.9	2739	13	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_4	25.5582124222768	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	44	False	NA	19	True	AATAAA	-15	NA	75168803	75176031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75171901_75172243_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ENSMUST00000152266.2	chrX	+	553	2	FSM	ENSMUSG00000079435.10	ENSMUST00000152266.2	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	10431	junction_1	0	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTTTGATTGCAGTTG	NA	False	NA	15	True	AATAAA	-14	NA	133487829	133488745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133488323_133488685
ENSMUST00000152276.8	chr11	+	1802	7	FSM	ENSMUSG00000040746.16	ENSMUST00000152276.8	1802	7	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_6	7.6955975870768	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAAAGGTTAAGAT	9464	False	NA	19	True	AATAAA	-20	NA	70538386	70542236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70541046_70541589_70541671_70541747
ENSMUST00000152348.2	chr11	+	870	2	FSM	ENSMUSG00000018923.14	ENSMUST00000152348.2	870	2	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	0	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTACTTGGGAAGTAGAGG	NA	False	NA	33	True	AATAAA	-43	NA	70342757	70344390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_70343165_70343927
ENSMUST00000152362.7	chr2	-	1579	10	FSM	ENSMUSG00000039449.15	ENSMUST00000152362.7	1579	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTATGGGTCATTGAAT	NA	False	NA	NA	False	NA	NA	NA	4656924	4628838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
ENSMUST00000152379.2	chrX	+	376	4	FSM	ENSMUSG00000087368.8	ENSMUST00000152379.2	376	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.12825877028341	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGATGCTGGGAACCTAA	NA	False	NA	NA	False	NA	NA	NA	135642606	135645336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_135642700_135644151_135644210_135644291_135644422_135645241
ENSMUST00000152391.9	chr6	-	1673	10	FSM	ENSMUSG00000039130.19	ENSMUST00000152391.9	1673	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	369.85085415744	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGCTGCTAGAGAATTG	12	True	NA	-11	True	AATAAA	-14	NA	30391001	30366382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_30366745_30370263_30370471_30372736_30372950_30373241_30373357_30374763_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
ENSMUST00000152434.9	chr17	+	1951	9	FSM	ENSMUSG00000025736.16	ENSMUST00000152434.9	1951	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	27.2855272992845	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTCTGCTGGGGGAG	NA	False	NA	16	True	AATAAA	-18	NA	26048025	26050741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26048138_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048971_26049036_26049112_26049181_26049273_26049409_26049483
ENSMUST00000152441.2	chr2	-	541	3	FSM	ENSMUSG00000062997.7	ENSMUST00000152441.2	541	3	0	0	0	0	multi-exon	FALSE	canonical	3	39700	junction_1	236.5	1466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGATGACAACGACAATAA	NA	False	NA	-48	True	NA	NA	NA	38895055	38891630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_38891778_38894118_38894201_38894743
ENSMUST00000152459.8	chr9	+	1784	12	FSM	ENSMUSG00000032076.21	ENSMUST00000152459.8	1784	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	125.413102509234	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTGCTGTTTGACACCT	NA	False	NA	3	True	AAAACA	-21	NA	47441508	47761885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674_47740708_47748014_47748069_47759464_47759597_47761569
ENSMUST00000152463.8	chrX	-	1272	7	FSM	ENSMUSG00000025283.16	ENSMUST00000152463.8	1272	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	540.496993516153	6302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGCATTTTTACTAGT	NA	False	NA	-7	True	AATAAA	-24	NA	153999445	153996127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998116_153998227_153998596_153998681_153998780_153998833_153999098
ENSMUST00000152495.8	chr5	+	1766	10	FSM	ENSMUSG00000007080.15	ENSMUST00000152495.8	1766	10	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_5	29.0151088781324	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTTATGCTTCCACAC	8237	False	NA	25	True	AGTAAA	-16	NA	110475484	110485317	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ENSMUST00000152528.2	chr19	+	1735	5	FSM	ENSMUSG00000024791.11	ENSMUST00000152528.2	1735	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	197.768014350147	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGCTTTTTATT	NA	False	NA	35	True	AATAAA	-20	NA	6135856	6141807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6135886_6136431_6136498_6136581_6136618_6140080_6140555_6140677
ENSMUST00000152580.8	chr2	-	1822	5	FSM	ENSMUSG00000038671.16	ENSMUST00000152580.8	1822	5	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	29.3715423496962	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTGTAGGTATTCAGA	6146	False	NA	NA	False	NA	NA	NA	181007127	181001107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806
ENSMUST00000152595.2	chr7	+	704	2	FSM	ENSMUSG00000087138.2	ENSMUST00000152595.2	704	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGGCTACAGACTGATTT	NA	False	NA	11	True	NA	NA	NA	44636396	44641752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44636795_44641446
ENSMUST00000152608.8	chr2	-	1654	10	FSM	ENSMUSG00000027108.16	ENSMUST00000152608.8	1654	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	135.509008401747	3596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGTTTGGGGA	NA	False	NA	-3	True	AATAAA	-16	NA	73044770	72923543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73044629
ENSMUST00000152617.8	chr2	+	5524	17	FSM	ENSMUSG00000038116.17	ENSMUST00000152617.8	5524	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	116.307176799198	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTGTCAGTCACATTA	NA	False	NA	6	True	AATAAA	-15	NA	156038653	156151869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_156038718_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136200_156138575_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ENSMUST00000152634.8	chr13	+	2095	12	FSM	ENSMUSG00000021694.19	ENSMUST00000152634.8	2095	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	31.8161038282489	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTTTCCTTTCCTTGT	NA	False	NA	7	True	ATTAAA	-18	NA	108295287	108331519	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_108295405_108297168_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108312338_108312441_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ENSMUST00000152665.3	chr17	+	901	5	FSM	ENSMUSG00000037805.16	ENSMUST00000152665.3	901	5	0	0	0	0	multi-exon	FALSE	canonical	3	5482	junction_3	1346.05653205948	132689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGCCTTGGTGTGCCTG	NA	False	NA	-5	True	AATAAA	-14	NA	28547559	28550001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
ENSMUST00000152681.8	chr14	+	2624	15	FSM	ENSMUSG00000022214.16	ENSMUST00000152681.8	2624	15	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	36.5692661191033	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTCTGTGTCTGTGTCA	NA	False	NA	10	True	AATAAA	-15	NA	55797990	55807518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55798085_55798531_55798877_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUST00000152689.8	chr1	-	3043	11	FSM	ENSMUSG00000062729.13	ENSMUST00000152689.8	3043	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_8	29.1204395571221	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5189	False	NA	-15	True	AGTAAA	-16	NA	171108760	171104564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
ENSMUST00000152697.3	chr7	-	1052	5	FSM	ENSMUSG00000070371.12	ENSMUST00000152697.3	1052	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	39.2778563569857	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127534691	127531809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127532287_127532542_127532665_127533310_127533453_127533561_127533800_127534618
ENSMUST00000152700.8	chr11	+	854	6	FSM	ENSMUSG00000020485.15	ENSMUST00000152700.8	854	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	256.77351888386	3095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTACTGAGGCCTGTGCCT	NA	False	NA	8	True	AATAAA	-25	NA	87628377	87634449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_87628495_87628992_87629100_87631330_87631473_87633621_87633678_87633883_87633938_87634071
ENSMUST00000152704.8	chr13	-	888	6	FSM	ENSMUSG00000021660.15	ENSMUST00000152704.8	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	5972	junction_2	361.40138350593	51336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453514	98446404	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453373
ENSMUST00000152724.2	chr17	+	1443	5	FSM	ENSMUSG00000090115.8	ENSMUST00000152724.2	1443	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	46.8794997840207	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCTTCTATGAAGATCC	NA	False	NA	6	True	TATAAA	-3	NA	47983644	47991981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47991606
ENSMUST00000152730.4	chrX	+	876	3	FSM	ENSMUSG00000050197.6	ENSMUST00000152730.4	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	2	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTTAATTTTATGTGC	NA	False	NA	2	True	AATAAA	-15	NA	37210095	37218844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_37210700_37211950_37211997_37218618
ENSMUST00000152739.2	chrX	-	784	2	FSM	ENSMUSG00000031320.10	ENSMUST00000152739.2	784	2	0	0	0	0	multi-exon	FALSE	canonical	3	11043	junction_1	0	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGAATCTCTGTTGGGCT	NA	False	NA	NA	False	TTTAAA	-40	NA	101232942	101231232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_101231978_101232903
ENSMUST00000152784.8	chr11	-	686	3	FSM	ENSMUSG00000085175.8	ENSMUST00000152784.8	686	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	9	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTTCATTATGTCTTTG	NA	False	NA	4	True	AATAAA	-22	NA	82671868	82670426	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_82670762_82670960_82671125_82671681
ENSMUST00000152790.8	chr11	-	714	4	FSM	ENSMUSG00000087165.8	ENSMUST00000152790.8	714	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	7.84573486395988	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCTTGTCTCAGTGATT	NA	False	NA	-3	True	NA	NA	NA	57692243	57686324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_57686621_57686851_57687000_57687137_57687224_57692059
ENSMUST00000152796.8	chr4	-	4129	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	0	0	0	0	multi-exon	FALSE	canonical	3	863	junction_4	54.1589097009901	1676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTGGCCTGCATGTATA	NA	False	NA	NA	False	ATTAAA	-19	NA	131939614	131912222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
ENSMUST00000152804.9	chr18	+	445	3	FSM	ENSMUSG00000046727.14	ENSMUST00000152804.9	445	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	356.5	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGACCAATTCTTTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	36481826	36526423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_36481870_36499567_36499795_36526248
ENSMUST00000152805.2	chr5	+	2370	7	FSM	ENSMUSG00000029106.15	ENSMUST00000152805.2	2370	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	255.256352625269	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCAACTTTGCAT	NA	False	NA	26	True	AATAAA	-27	NA	34776697	34789652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34786479_34786517_34787578_34787629_34787813
ENSMUST00000152868.2	chr16	+	416	2	FSM	ENSMUSG00000046516.11	ENSMUST00000152868.2	416	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAGAAAATATGCTGAA	NA	False	NA	6	True	ATTAAA	-8	NA	38167357	38173103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_38167658_38172987
ENSMUST00000152901.8	chr3	-	2357	9	FSM	ENSMUSG00000027669.15	ENSMUST00000152901.8	2357	9	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_7	7.72981241687015	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTACTTTTCCATTTT	NA	False	NA	-2	True	TATAAA	-16	NA	32670674	32638146	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_32639376_32641709_32641927_32643857_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
ENSMUST00000152913.8	chr12	+	1583	12	FSM	ENSMUSG00000021235.14	ENSMUST00000152913.8	1583	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	67.4165538687435	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTCTTTTCCTCTT	NA	False	NA	13	True	AATAAA	-13	NA	84408803	84420566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418177_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ENSMUST00000152918.8	chr7	+	628	4	FSM	ENSMUSG00000037563.16	ENSMUST00000152918.8	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	20184	junction_3	558.517283130572	48815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050187	28052121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28050277_28050416_28050519_28051601_28051836_28051918
ENSMUST00000152919.3	chr2	-	699	5	FSM	ENSMUSG00000027620.17	ENSMUST00000152919.3	699	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	947.747988655212	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGCCATGAAGAACGTAGC	NA	False	NA	-26	True	NA	NA	NA	156022069	156019280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_156019306_156019552_156019827_156020799_156020873_156021096_156021161_156021806
ENSMUST00000152936.8	chr19	-	604	4	FSM	ENSMUSG00000016495.13	ENSMUST00000152936.8	604	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	25.1042271783503	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAATTTCTCGTGTGTA	NA	False	NA	-77	True	AATAAA	-43	NA	29339273	29326076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_29326406_29335716_29335804_29338216_29338328_29339196
ENSMUST00000152943.8	chr4	-	437	3	FSM	ENSMUSG00000085241.8	ENSMUST00000152943.8	437	3	0	0	0	0	multi-exon	FALSE	canonical	3	959	junction_1	21	6953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTGATTTAATGTGT	NA	False	NA	-9	True	ATTAAA	-15	NA	132080997	132079243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132079555_132079973_132080010_132080907
ENSMUST00000152979.8	chr11	+	3976	23	FSM	ENSMUSG00000020898.19	ENSMUST00000152979.8	3976	23	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	94.2205957376466	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTCATCTCTGAGGT	5261	False	NA	21	True	AATAAA	-21	NA	68906911	68927299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ENSMUST00000152993.8	chr4	-	462	2	FSM	ENSMUSG00000054428.13	ENSMUST00000152993.8	462	2	0	0	0	0	multi-exon	FALSE	canonical	3	8437	junction_1	0	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGCCTTCTACTGTCT	9412	False	NA	-20	True	AATAAA	-19	NA	132260799	132257865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132258135_132260606
ENSMUST00000153008.8	chr2	+	765	4	FSM	ENSMUSG00000015092.10	ENSMUST00000153008.8	765	4	0	0	0	0	multi-exon	FALSE	canonical	3	2578	junction_3	170.755836080515	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTTCTCATCTTTT	NA	False	NA	NA	False	NA	NA	NA	25447882	25451373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980
ENSMUST00000153056.8	chr12	+	2720	7	FSM	ENSMUSG00000021134.18	ENSMUST00000153056.8	2720	7	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	608.09467921442	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992305	80997277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_80992443_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
ENSMUST00000153065.8	chr13	-	2502	8	FSM	ENSMUSG00000025871.19	ENSMUST00000153065.8	2502	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	177.014469603419	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCTTGTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	54713116	54699035	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54712327_54712435_54712994
ENSMUST00000153073.8	chr11	-	2061	10	FSM	ENSMUSG00000007646.14	ENSMUST00000153073.8	2061	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	58.9867112048589	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAATAGAAATAAAA	NA	False	NA	-38	True	NA	NA	NA	87295332	87269416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_87270314_87271657_87271719_87279073_87279154_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
ENSMUST00000153075.8	chr16	-	3511	22	FSM	ENSMUSG00000022843.18	ENSMUST00000153075.8	3511	22	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_8	38.9931676089723	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACACCTAATTAGCCAC	NA	False	NA	-33	True	AATAAA	-13	NA	20534914	20521747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ENSMUST00000153110.8	chr7	-	1016	5	FSM	ENSMUSG00000070371.12	ENSMUST00000153110.8	1016	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	32.1820990614348	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127534651	127531809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127532287_127532542_127532665_127532738_127533005_127533681_127533800_127534618
ENSMUST00000153146.9	chr8	+	801	6	FSM	ENSMUSG00000014856.13	ENSMUST00000153146.9	801	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	152.856010676715	1756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCCGTGTGGGTGATGA	259	False	NA	16	True	AATAAA	-18	NA	106052993	106055687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055117_106055239_106055325_106055403
ENSMUST00000153157.8	chr11	-	989	4	FSM	ENSMUSG00000020925.17	ENSMUST00000153157.8	989	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	267.304237818175	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGCTTCTTGTTGGGT	NA	False	NA	NA	False	NA	NA	NA	102588560	102579144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102579686_102581026_102581163_102582936_102583025_102588336
ENSMUST00000153187.8	chr16	-	2922	11	FSM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_10	237.918389369128	2137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATTGGCTCCTCATTT	6266	False	NA	-4	True	NA	NA	NA	38370584	38345501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ENSMUST00000153193.3	chr18	+	821	7	FSM	ENSMUSG00000024516.14	ENSMUST00000153193.3	821	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	174.951818764164	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCTTCCTTTTGTGGCC	NA	False	NA	NA	False	AATAAA	-16	NA	65933642	65950731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_65933783_65934521_65934564_65942515_65942626_65945735_65945886_65947908_65948029_65949891_65949950_65950530
ENSMUST00000153246.2	chr2	-	890	3	FSM	ENSMUSG00000038324.14	ENSMUST00000153246.2	890	3	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_2	11.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAATCCTGGAGCCCTGGC	NA	False	NA	NA	False	NA	NA	NA	155479656	155476664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155477363_155478115_155478229_155479577
ENSMUST00000153285.9	chr8	+	2481	16	FSM	ENSMUSG00000000738.19	ENSMUST00000153285.9	2481	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	69.0747099563621	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGCTCTCCATGTGT	NA	False	NA	13	True	AGTAAA	-13	NA	123792214	123824492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ENSMUST00000153302.8	chr5	-	1582	9	FSM	ENSMUSG00000035234.19	ENSMUST00000153302.8	1582	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	75.0232255704858	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAATATCTTATTTTT	NA	False	NA	-3	True	AATAAA	-19	NA	100968806	100953057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_100953318_100953763_100954356_100954644_100954757_100957419_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100968696
ENSMUST00000153316.8	chr11	+	708	7	FSM	ENSMUSG00000038335.14	ENSMUST00000153316.8	708	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	306.471677139812	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTGGACTTATGACCCA	NA	False	NA	NA	False	AATGAA	-21	NA	74794795	74799140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_74794840_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ENSMUST00000153339.2	chr11	+	637	2	FSM	ENSMUSG00000020402.12	ENSMUST00000153339.2	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	3558	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGGGTCCTTTGTAA	2387	False	NA	NA	False	NA	NA	NA	52278023	52279618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_52278301_52279258
ENSMUST00000153341.8	chr8	+	960	3	FSM	ENSMUSG00000065952.14	ENSMUST00000153341.8	960	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	2.5	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATCTGTTTATTTAT	NA	False	NA	24	True	ATTAAA	-44	NA	3617994	3628597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_3618097_3623120_3623222_3627840
ENSMUST00000153353.9	chr2	+	1204	4	FSM	ENSMUSG00000027405.17	ENSMUST00000153353.9	1204	4	0	0	0	0	multi-exon	FALSE	canonical	3	1876	junction_1	235.799820940465	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATGTGTGTATTTTGT	NA	False	NA	25	True	AATAAA	-14	NA	130119008	130121227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_130119545_130119768_130119891_130120075_130120211_130120816
ENSMUST00000153360.8	chr18	-	2498	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_3	55.0789206502814	1713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGGGTGTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	24255010	24237813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
ENSMUST00000153386.8	chrX	-	2884	12	FSM	ENSMUSG00000025151.17	ENSMUST00000153386.8	2884	12	0	0	0	0	multi-exon	FALSE	canonical	3	1240	junction_9	165.668493041908	2402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGTGCTTCTCATC	NA	False	NA	-4	True	AATAAA	-19	NA	93585596	93579081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ENSMUST00000153395.8	chr11	-	1564	11	FSM	ENSMUSG00000018677.10	ENSMUST00000153395.8	1564	11	0	0	0	0	multi-exon	FALSE	canonical	3	4398	junction_2	183.250211459632	1924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7726	False	NA	95	True	NA	NA	NA	102298332	102293970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102294362_102294458_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ENSMUST00000153442.8	chr5	-	2374	7	FSM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	0	0	0	0	multi-exon	FALSE	canonical	3	934	junction_3	92.4764234218046	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186728	100182579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUST00000153470.9	chr7	-	2224	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	3441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTACCTTGACAGTGG	NA	False	NA	-14	True	AATAAA	-17	NA	89590412	89566736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
ENSMUST00000153474.9	chr4	+	606	5	FSM	ENSMUSG00000086290.10	ENSMUST00000153474.9	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	27.427176303805	4713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	False	NA	27	True	AATAAA	-16	NA	132035988	132038335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132036219_132037148_132037215_132037461_132037527_132037761_132037816_132038144
ENSMUST00000153510.9	chr11	+	1887	12	FSM	ENSMUSG00000037243.18	ENSMUST00000153510.9	1887	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	49.3946830209872	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTGGTGCTACAGATAT	7673	False	NA	14	True	AATAAA	-21	NA	58197894	58205439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ENSMUST00000153512.2	chr15	-	738	3	FSM	ENSMUSG00000014313.16	ENSMUST00000153512.2	738	3	0	0	0	0	multi-exon	FALSE	canonical	3	8821	junction_1	415.5	38885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTTTGCTTGGTTAT	403	False	NA	-5	True	AATAAA	-18	NA	35937791	35932125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_35932244_35935430_35935560_35937300
ENSMUST00000153514.8	chr2	-	2127	18	FSM	ENSMUSG00000027620.17	ENSMUST00000153514.8	2127	18	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_15	799.195928097666	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022104	155989859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156021096_156021161_156021806
ENSMUST00000153526.8	chr11	-	2946	18	FSM	ENSMUSG00000020918.15	ENSMUST00000153526.8	2946	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	124.621058832359	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	7071	False	NA	-1	True	AATAAA	-18	NA	100602999	100595571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601075_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ENSMUST00000153609.8	chr7	+	1248	9	FSM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	0	0	0	0	multi-exon	FALSE	canonical	3	2395	junction_6	274.913622798144	6262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCTGTGTATCTGCA	NA	False	NA	23	True	AATAAA	-23	NA	65710085	65724335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65719866_65719947_65720337_65720414_65720979_65721074_65724069
ENSMUST00000153627.8	chr12	+	2036	16	FSM	ENSMUSG00000021177.17	ENSMUST00000153627.8	2036	16	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	45.8998910674089	1213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACAGGCCTGGAATGA	NA	False	NA	19	True	ATTAAA	-19	NA	99850795	99921478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ENSMUST00000153655.8	chr2	-	2484	11	FSM	ENSMUSG00000039671.19	ENSMUST00000153655.8	2484	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	203.909293559661	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGAATGGTTGTGTTTA	NA	False	NA	33	True	AATAGA	-13	NA	165717697	165669048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165694787_165694800_165717624
ENSMUST00000153663.8	chr2	-	3032	6	FSM	ENSMUSG00000037773.15	ENSMUST00000153663.8	3032	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	6.96850055607374	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGCTTTTTTGGTTTGT	8069	False	NA	NA	False	ATTAAA	-14	NA	130266186	130260144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264625_130264732_130264813_130265331
ENSMUST00000153674.8	chr8	-	884	5	FSM	ENSMUSG00000050914.17	ENSMUST00000153674.8	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	25.936219847927	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAAATTTCTGTGCAT	NA	False	NA	NA	False	ATTAAA	-13	NA	46452904	46449947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452687
ENSMUST00000153684.8	chr11	+	1797	5	FSM	ENSMUSG00000018572.11	ENSMUST00000153684.8	1797	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	234.354832465644	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTGTCCTATTTG	3531	False	NA	15	True	AATAAA	-25	NA	69887816	69890834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69887886_69888422_69888455_69888571_69888665_69889126_69889959_69890063
ENSMUST00000153748.2	chr8	+	4659	5	FSM	ENSMUSG00000071796.14	ENSMUST00000153748.2	4659	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	481.210452920549	2646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAGTAGATGTCTT	7188	False	NA	NA	False	AATAAA	-5	NA	20143847	20172994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_20143957_20157802_20158000_20163109_20163409_20167037_20167158_20169060
ENSMUST00000153766.8	chr4	+	1377	9	FSM	ENSMUSG00000028708.17	ENSMUST00000153766.8	1377	9	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	26.830195209875	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGCTTATAGCGTGTC	NA	False	NA	NA	False	TTTAAA	-12	NA	115696419	115731067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407
ENSMUST00000153819.2	chr13	+	1098	4	FSM	ENSMUSG00000037966.16	ENSMUST00000153819.2	1098	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	176.942551882431	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGGTTCCATGTGCCA	2185	False	NA	13	True	AATAAA	-15	NA	49343771	49349720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_49343836_49347211_49347441_49348369_49348534_49349079
ENSMUST00000153820.8	chr9	-	2652	8	FSM	ENSMUSG00000036986.17	ENSMUST00000153820.8	2652	8	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_3	51.5692520316326	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAAAAAAAACCCA	2151	False	NA	5	True	NA	NA	NA	58157069	58128332	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ENSMUST00000153892.2	chr11	-	1051	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	0	0	0	0	multi-exon	FALSE	canonical	3	3819	junction_1	149.312498546579	35644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTCTTTATTCTGAA	NA	False	NA	-51	True	AATAAA	-18	NA	115427102	115413927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
ENSMUST00000153970.8	chr9	+	1979	7	FSM	ENSMUSG00000032309.16	ENSMUST00000153970.8	1979	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	461.943599250914	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTTGTAATTATTG	NA	False	NA	9	True	AATAAA	-16	NA	55116269	55131715	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_55116403_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ENSMUST00000154030.8	chr2	-	2007	5	FSM	ENSMUSG00000085385.8	ENSMUST00000154030.8	2007	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	13.2193040664023	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTCAACCCATGAATT	8347	False	NA	3	True	AATAAA	-32	NA	158203442	158197684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_158197962_158199117_158199184_158201101_158202520_158202862_158202991_158203324
ENSMUST00000154032.2	chr15	-	2456	11	FSM	ENSMUSG00000036966.16	ENSMUST00000154032.2	2456	11	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	18.3913022921162	353	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACGGAAGGGGAATCCTT	NA	False	NA	-5	True	AATAAA	-26	NA	102044669	102024962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
ENSMUST00000154060.2	chr5	-	594	3	FSM	ENSMUSG00000085042.9	ENSMUST00000154060.2	594	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	17	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGACCCTCTCCGTGC	NA	False	NA	-8	True	ATTAAA	-21	NA	135042008	135040975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_135041405_135041547_135041643_135041938
ENSMUST00000154080.2	chr11	+	964	3	FSM	ENSMUSG00000002064.11	ENSMUST00000154080.2	964	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTCATTTATTAAG	NA	False	NA	19	True	NA	NA	NA	78141246	78146322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_78141372_78141841_78142039_78145680
ENSMUST00000154132.8	chr10	-	1974	8	FSM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_6	66.3663302881692	2444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCTGGAAATCCAGTACT	NA	False	NA	NA	False	AATAAA	-22	NA	14581304	14530498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ENSMUST00000154135.8	chr18	-	2530	8	FSM	ENSMUSG00000063889.17	ENSMUST00000154135.8	2530	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	26.1338782394947	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGTGTGTATGTCT	-5	True	NA	-2	True	TATAAA	-17	NA	3337488	3266355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_3268130_3273421_3273579_3276693_3276730_3295039_3295183_3295321_3295417_3325360_3325479_3327493_3327592_3337379
ENSMUST00000154143.8	chr7	-	1158	4	FSM	ENSMUSG00000002608.9	ENSMUST00000154143.8	1158	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	5.43650214343336	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACGCAGTGTTGACGAA	NA	False	NA	NA	False	NA	NA	NA	25418428	25413558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_25413908_25414175_25414446_25415159_25415613_25418342
ENSMUST00000154150.8	chr16	-	3178	23	FSM	ENSMUSG00000022680.15	ENSMUST00000154150.8	3178	23	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_15	13.5268328374224	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGTAACTTTTGAATAA	9843	False	NA	NA	False	NA	NA	NA	13720846	13653455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ENSMUST00000154154.2	chr4	+	1250	5	FSM	ENSMUSG00000078497.10	ENSMUST00000154154.2	1250	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	206.815739246316	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAGAGAAACCTTACAAAT	2377	False	NA	NA	False	NA	NA	NA	147445767	147475461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_147445910_147447267_147447362_147469676_147469759_147472778_147472906_147474656
ENSMUST00000154156.2	chr11	-	784	2	FSM	ENSMUSG00000069899.4	ENSMUST00000154156.2	784	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAGAC	1787	False	NA	NA	False	AATAAA	-16	NA	45943148	45942194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_45942889_45943058
ENSMUST00000154194.2	chr4	+	535	2	FSM	ENSMUSG00000085614.2	ENSMUST00000154194.2	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCTTGCTTCAGAACAA	662	False	NA	NA	False	AATAAA	-15	NA	11966564	11994280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_11966684_11993864
ENSMUST00000154207.8	chr9	-	859	5	FSM	ENSMUSG00000037742.15	ENSMUST00000154207.8	859	5	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_4	5371.55305172536	2417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGGATGTCTATAAAAT	NA	False	NA	NA	False	NA	NA	NA	78396433	78386930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78396355
ENSMUST00000154219.8	chr3	+	1945	13	FSM	ENSMUSG00000027810.15	ENSMUST00000154219.8	1945	13	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	220.750408958977	2228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58433476	58464922	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ENSMUST00000154237.8	chr1	+	2420	9	FSM	ENSMUSG00000026456.19	ENSMUST00000154237.8	2420	9	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_5	130.869925880624	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATCATTGTCGTCGTGTC	7971	False	NA	39	True	AATAAA	-27	NA	134333518	134339474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134336226_134337338_134337425_134338230_134338331_134338644
ENSMUST00000154241.8	chr5	-	1724	8	FSM	ENSMUSG00000107283.4	ENSMUST00000154241.8	1724	8	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_7	57.209960599853	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTTTAGCAGTTTTG	NA	False	NA	NA	False	TTTAAA	-13	NA	31311595	31297997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
ENSMUST00000154279.3	chr4	+	2942	5	FSM	ENSMUSG00000087166.10	ENSMUST00000154279.3	2942	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	184.711937892492	1455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTACTTAATGTCCCT	NA	False	NA	32	True	NA	NA	NA	98614984	98626717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_98615078_98615631_98615708_98621379_98622316_98624682_98624985_98625182
ENSMUST00000154340.8	chr2	+	1417	4	FSM	ENSMUSG00000038900.18	ENSMUST00000154340.8	1417	4	0	0	0	0	multi-exon	FALSE	canonical	3	2580	junction_3	1756.95310757636	2385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5811	False	NA	24	True	AATAAA	-23	NA	32851740	32854057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_32852135_32852585_32852685_32852996_32853866_32854002
ENSMUST00000154469.8	chr5	+	1473	5	FSM	ENSMUSG00000040532.15	ENSMUST00000154469.8	1473	5	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_3	34.8926926447358	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGATCCGTTTTCACC	NA	False	NA	10	True	AATAAA	-17	NA	135038309	135041024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
ENSMUST00000154477.8	chr15	-	1905	8	FSM	ENSMUSG00000022552.17	ENSMUST00000154477.8	1905	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	64.7960694197179	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTTCTGTTCTTGG	8177	False	NA	-4	True	ATTAAA	-15	NA	76235247	76231240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232008_76232095_76232205_76232285_76232423_76232500_76232636_76234254
ENSMUST00000154533.8	chr14	+	762	4	FSM	ENSMUSG00000060126.15	ENSMUST00000154533.8	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	5160	junction_2	155.938021876214	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATGGCTAGCATATGTG	1100	False	NA	NA	False	NA	NA	NA	76082794	76084528	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133
ENSMUST00000154548.8	chr5	-	1080	5	FSM	ENSMUSG00000055923.17	ENSMUST00000154548.8	1080	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	25.8891869319992	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAATCTTATATTT	NA	False	NA	NA	False	AAAACA	-5	NA	77053339	77044088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
ENSMUST00000154550.8	chr8	+	1000	8	FSM	ENSMUSG00000002395.15	ENSMUST00000154550.8	1000	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	297.542656862947	3014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTCTTCAGTGCTAG	NA	False	NA	22	True	AATAAA	-23	NA	71819860	71822376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71820014_71820141_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
ENSMUST00000154553.2	chr17	+	1049	8	FSM	ENSMUSG00000073468.13	ENSMUST00000154553.2	1049	8	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_5	48.6457414710199	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGGATCAACTGTA	2923	False	NA	NA	False	AATAAA	-19	NA	8529933	8546274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
ENSMUST00000154596.2	chr2	+	826	3	FSM	ENSMUSG00000027602.10	ENSMUST00000154596.2	826	3	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_2	23	324	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTTTGCCTCCAGCTG	NA	False	NA	6	True	AATAAA	-18	NA	155118808	155119988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_155118934_155119017_155119125_155119394
ENSMUST00000154615.3	chr13	+	487	2	FSM	ENSMUSG00000085896.3	ENSMUST00000154615.3	487	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGGTGAGAGTCAACTT	NA	False	NA	NA	False	AATAAA	-23	NA	55061047	55062292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_55061126_55061883
ENSMUST00000154691.8	chr9	-	2212	11	FSM	ENSMUSG00000039048.16	ENSMUST00000154691.8	2212	11	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_9	80.1217199016596	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTCTTGAGAGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	35122232	35115501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120804_35121240_35121462_35122040
ENSMUST00000154781.8	chr5	+	955	4	FSM	ENSMUSG00000079109.12	ENSMUST00000154781.8	955	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	13.490737563232	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAACAAAGCA	NA	False	NA	NA	False	AATGAA	-5	NA	143846842	143851109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436
ENSMUST00000154811.8	chr4	-	1017	5	FSM	ENSMUSG00000028693.16	ENSMUST00000154811.8	1017	5	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_2	71.8487995724355	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGGAATGTATTTCT	NA	False	NA	NA	False	GATAAA	-8	NA	116484690	116468663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ENSMUST00000154853.8	chr7	-	883	5	FSM	ENSMUSG00000035642.17	ENSMUST00000154853.8	883	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	23.5902522241709	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGTTGAGAGCATTAG	NA	False	NA	NA	False	AATAAA	-22	NA	97228703	97199546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97224794_97224899_97228572
ENSMUST00000154864.4	chrX	+	3057	9	FSM	ENSMUSG00000025626.17	ENSMUST00000154864.4	3057	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	81.7778049045094	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTTCCAATAGTTTGAT	NA	False	NA	NA	False	ATTAAA	-17	NA	52001171	52044842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_52001314_52020449_52020584_52020857_52020902_52029101_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
ENSMUST00000154891.8	chr7	+	1722	9	FSM	ENSMUSG00000030815.12	ENSMUST00000154891.8	1722	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	40.5768945953236	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCATGTCTGCTGTCTA	NA	False	NA	24	True	AATAAA	-25	NA	127172754	127182477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127173139_127176706_127176819_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ENSMUST00000154894.2	chr11	-	716	7	FSM	ENSMUSG00000000751.14	ENSMUST00000154894.2	716	7	0	0	0	0	multi-exon	FALSE	canonical	3	1534	junction_2	159.580091350881	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGTGACTTGGGTGTAAA	NA	False	NA	NA	False	GGGGCT	-35	NA	75239121	75206865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ENSMUST00000154899.7	chr2	-	1984	12	FSM	ENSMUSG00000026767.13	ENSMUST00000154899.7	1984	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	46.6171323098428	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCACTTTTACATTTG	NA	False	NA	-22	True	AATAAA	-19	NA	12424259	12352073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12410670_12410732_12414811_12414892_12423969
ENSMUST00000154914.2	chr7	-	811	3	FSM	ENSMUSG00000030960.17	ENSMUST00000154914.2	811	3	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	20.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAGTCTTGAAAGAGTAA	NA	False	NA	NA	False	CATAAA	-11	NA	132454368	132451834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_132452439_132453154_132453221_132454227
ENSMUST00000154932.3	chr5	-	779	5	FSM	ENSMUSG00000025537.13	ENSMUST00000154932.3	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	3.20156211871642	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCATCCTGGCTATGGG	NA	False	NA	NA	False	NA	NA	NA	129902946	129895070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_129895128_129895702_129895867_129898301_129898368_129902056_129902112_129902509
ENSMUST00000154939.2	chr4	+	266	2	FSM	ENSMUSG00000066009.9	ENSMUST00000154939.2	266	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	146033867	146035167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_146034017_146035050
ENSMUST00000154972.9	chr11	-	1049	5	FSM	ENSMUSG00000014195.17	ENSMUST00000154972.9	1049	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	1222.31570696772	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTCCTTTTGTTTTG	5930	False	NA	NA	False	NA	NA	NA	100510446	100488252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100488881_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUST00000154993.2	chrX	+	1035	2	FSM	ENSMUSG00000084990.2	ENSMUST00000154993.2	1035	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTCCCCTCCCCCAC	NA	False	NA	NA	False	NA	NA	NA	36078423	36080853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36078984_36080378
ENSMUST00000155008.2	chr9	+	481	1	FSM	ENSMUSG00000066443.6	ENSMUST00000155008.2	481	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3356	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGTACACAAAGAAATAAA	NA	False	NA	NA	False	NA	NA	NA	88272889	88273370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_88272900_88273400
ENSMUST00000155071.9	chr17	-	712	5	FSM	ENSMUSG00000052146.17	ENSMUST00000155071.9	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	4719	junction_4	780.063899626178	10944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGACCCGAAACAGAATTG	NA	False	NA	NA	False	NA	NA	NA	27854202	27849942	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27854177
ENSMUST00000155116.2	chr15	-	593	5	FSM	ENSMUSG00000022283.16	ENSMUST00000155116.2	593	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	2707.45926792999	3712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAACAACAAAAAAATACA	9587	False	NA	NA	False	NA	NA	NA	36598263	36596150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_36596344_36596762_36596900_36597207_36597339_36597700_36597786_36598216
ENSMUST00000155248.2	chr7	+	684	11	FSM	ENSMUSG00000053367.16	ENSMUST00000155248.2	684	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.3304963254654	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTGATTCAGTGCGTA	3212	False	NA	6	True	AATAAA	-21	NA	6263534	6284858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_6263544_6266905_6266933_6269828_6269847_6271800_6271807_6272881_6272891_6274395_6274405_6275974_6276002_6277345_6277373_6280418_6280541_6282412_6282451_6284466
ENSMUST00000155285.8	chr10	-	2769	10	FSM	ENSMUSG00000020184.16	ENSMUST00000155285.8	2769	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	165.020836694067	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGATTTGTCTTACACA	NA	False	NA	-19	True	AATAAA	-21	NA	117545927	117524799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850
ENSMUST00000155346.8	chr4	+	1483	14	FSM	ENSMUSG00000028687.18	ENSMUST00000155346.8	1483	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	50.6509110766964	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATTCCCTACCCAAAAT	3020	False	NA	-22	True	NA	NA	NA	116671515	116676580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_116671634_116672760_116672910_116672995_116673036_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ENSMUST00000155349.8	chr4	-	849	3	FSM	ENSMUSG00000085823.8	ENSMUST00000155349.8	849	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTTTTGCCTTCATGT	NA	False	NA	NA	False	ATTAAA	-16	NA	137611237	137609680	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_137610210_137610538_137610721_137611099
ENSMUST00000155364.8	chr17	+	958	5	FSM	ENSMUSG00000023861.18	ENSMUST00000155364.8	958	5	0	0	0	0	multi-exon	FALSE	canonical	2	460	junction_2	254.978920697378	4164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGTGTGACTATATAT	2121	False	NA	4	True	AATAAA	-18	NA	8502593	8516493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_8502794_8512246_8512251_8515366_8515464_8515655_8515789_8515969
ENSMUST00000155377.2	chrX	+	526	2	FSM	ENSMUSG00000031231.5	ENSMUST00000155377.2	526	2	0	0	0	0	multi-exon	FALSE	canonical	3	9427	junction_1	0	5103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTTGTTTTTTTC	NA	False	NA	12	True	AATAAA	-24	NA	105062996	105065564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_105063310_105065351
ENSMUST00000155399.2	chr11	-	696	4	FSM	ENSMUSG00000020737.13	ENSMUST00000155399.2	696	4	0	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_1	143.613679323694	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTGGGTGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	115405197	115391207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_115391511_115392830_115392929_115393857_115394001_115405045
ENSMUST00000155452.8	chr16	-	560	6	FSM	ENSMUSG00000022956.12	ENSMUST00000155452.8	560	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2452.38509210931	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGGCGTGAGGAGCCTT	952	False	NA	-8	True	AATAAA	-13	NA	91728434	91722108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91722280_91722428_91722516_91723346_91723460_91725786_91725898_91727241_91727293_91728407
ENSMUST00000155480.9	chr12	-	1970	7	FSM	ENSMUSG00000076432.14	ENSMUST00000155480.9	1970	7	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	1514.35583114846	4139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTATTATGGCTTTGTA	NA	False	NA	NA	False	AATAAA	-17	NA	21467589	21440332	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_21441417_21441717_21441801_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ENSMUST00000155490.3	chr11	-	729	4	FSM	ENSMUSG00000020935.9	ENSMUST00000155490.3	729	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	518.074211758208	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGACTCCAGATGACCCC	5978	False	NA	NA	False	NA	NA	NA	102919130	102890469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102890674_102890975_102891183_102918085_102918248_102918974
ENSMUST00000155530.8	chr2	-	2257	14	FSM	ENSMUSG00000026767.13	ENSMUST00000155530.8	2257	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	44.4355793262468	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCACTTTTACATTTG	NA	False	NA	-22	True	AATAAA	-19	NA	12424246	12352073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12408808_12408980_12410670_12410732_12414811_12414892_12423969
ENSMUST00000155592.8	chr7	-	1091	6	FSM	ENSMUSG00000006335.17	ENSMUST00000155592.8	1091	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	68.2800117164606	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	-1	True	AATAAA	-16	NA	3632883	3623322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_3623474_3623775_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
ENSMUST00000155597.2	chrX	-	1310	11	FSM	ENSMUSG00000031387.15	ENSMUST00000155597.2	1310	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	617.352095647208	3973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGACCCTGTTCCACATG	NA	False	NA	-20	True	NA	NA	NA	72974362	72965744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974315
ENSMUST00000155599.2	chrX	-	2326	2	FSM	ENSMUSG00000031167.17	ENSMUST00000155599.2	2326	2	0	0	0	0	multi-exon	FALSE	canonical	2	63	junction_1	0	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTTACACGTATGT	9340	False	NA	0	True	ATTAAA	-19	NA	8009157	8005213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_8007448_8009065
ENSMUST00000155611.8	chr16	-	1468	7	FSM	ENSMUSG00000003166.21	ENSMUST00000155611.8	1468	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	165.862392763801	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTTACGTGTGCATTTG	NA	False	NA	69	True	NA	NA	NA	17709513	17667174	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ENSMUST00000155647.2	chr7	-	2474	6	FSM	ENSMUSG00000025465.14	ENSMUST00000155647.2	2474	6	0	0	0	0	multi-exon	FALSE	canonical	3	1613	junction_2	107.86027999222	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGTAACTATTTGTGTGT	NA	False	NA	-9	True	NA	NA	NA	139696302	139685630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139693047_139696219
ENSMUST00000155671.8	chr5	+	2716	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	0	0	0	0	multi-exon	FALSE	canonical	3	1453	junction_1	367.656844837078	7002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTGTATGGGTGTTT	679	False	NA	11	True	AATAAA	-24	NA	122492431	122503047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
ENSMUST00000155672.8	chr7	+	1938	8	FSM	ENSMUSG00000041769.14	ENSMUST00000155672.8	1938	8	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_3	92.005767343628	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138448323	138484783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ENSMUST00000155676.8	chrX	-	2442	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	0	0	0	0	multi-exon	FALSE	canonical	3	1598	junction_1	83.5636816379513	4809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGAATCCTGTGTAATA	NA	False	NA	-6	True	AATAAA	-20	NA	73412279	73409323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
ENSMUST00000155677.8	chr8	-	639	6	FSM	ENSMUSG00000055553.17	ENSMUST00000155677.8	639	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	323.170543212094	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCCCACCCAGTATCACC	NA	False	NA	NA	False	NA	NA	NA	70975830	70966776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70966819_70967244_70967399_70968044_70968092_70971014_70971168_70972586_70972712_70975712
ENSMUST00000155679.8	chr9	+	3088	16	FSM	ENSMUSG00000031918.17	ENSMUST00000155679.8	3088	16	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	100.813138473559	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCCACAGTTGTCTA	NA	False	NA	27	True	ATTAAA	-16	NA	13660476	13717777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUST00000155713.8	chrX	+	1317	5	FSM	ENSMUSG00000034160.14	ENSMUST00000155713.8	1317	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	106.6123233965	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	100683667	100696483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_100683717_100683823_100683929_100686581_100686763_100687552_100687797_100695745
ENSMUST00000155732.2	chr13	+	453	4	FSM	ENSMUSG00000021514.19	ENSMUST00000155732.2	453	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	20.6774165590278	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCTGGCCAATGCAGAG	NA	False	NA	NA	False	NA	NA	NA	65426716	65432784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_65426913_65427074_65427155_65428075_65428203_65432734
ENSMUST00000155805.2	chr7	+	518	4	FSM	ENSMUSG00000037563.16	ENSMUST00000155805.2	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	19383	junction_2	895.518844022838	11488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050348	28052121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28050519_28051601_28051699_28051787_28051836_28051918
ENSMUST00000155837.8	chr2	-	2120	18	FSM	ENSMUSG00000027620.17	ENSMUST00000155837.8	2120	18	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_15	717.627699835322	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022096	155989859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ENSMUST00000155873.3	chr4	-	622	5	FSM	ENSMUSG00000059291.16	ENSMUST00000155873.3	622	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	4504.49472749164	20154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCCGATTGTCCCACG	NA	False	NA	NA	False	NA	NA	NA	135780401	135777590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780280
ENSMUST00000155891.8	chr2	+	1167	11	FSM	ENSMUSG00000027222.15	ENSMUST00000155891.8	1167	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	67.8416538713496	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGTGGCTCTGTGTCAT	NA	False	NA	20	True	AATAAA	-20	NA	92205020	92211561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_92205167_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
ENSMUST00000155894.2	chr11	-	985	7	FSM	ENSMUSG00000041346.12	ENSMUST00000155894.2	985	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	61.2880267443995	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTCATTGTGTCTGTTC	NA	False	NA	-3	True	TATAAA	-16	NA	69454748	69452583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454145_69454263_69454372_69454464_69454684
ENSMUST00000155953.8	chr2	-	1590	7	FSM	ENSMUSG00000026972.16	ENSMUST00000155953.8	1590	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.4940795711051	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGGCGAGTGGCTGG	9424	False	NA	-34	True	AATAAA	-14	NA	24825157	24815366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_24815689_24815767_24816461_24816599_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
ENSMUST00000155965.2	chr11	+	473	4	FSM	ENSMUSG00000086003.8	ENSMUST00000155965.2	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	38.4967531098403	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTTTACCTGCTTGTA	NA	False	NA	15	True	AATAAA	-22	NA	94024327	94046602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_94024382_94029312_94029490_94046281_94046324_94046402
ENSMUST00000155982.2	chr10	-	538	3	FSM	ENSMUSG00000087030.2	ENSMUST00000155982.2	538	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCCTGTCTTTGATGT	NA	False	NA	NA	False	AATAAA	-17	NA	62893246	62891381	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62891640_62892426_62892599_62893138
ENSMUST00000156067.8	chr2	+	1485	7	FSM	ENSMUSG00000047909.12	ENSMUST00000156067.8	1485	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	24.8439574589521	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	4841	False	NA	33	True	AATAAA	-35	NA	11783374	11795136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_11783714_11784487_11784635_11786287_11786345_11788451_11788561_11789101_11789264_11791034_11791114_11794544
ENSMUST00000156212.8	chrX	+	2368	9	FSM	ENSMUSG00000009995.18	ENSMUST00000156212.8	2368	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	93.7382492635744	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326355	73333754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331946_73332056_73332626_73332710_73332789_73332904
ENSMUST00000156218.2	chr10	-	2124	4	FSM	ENSMUSG00000062931.16	ENSMUST00000156218.2	2124	4	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	59.275252471462	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTATTTATGTTGTC	NA	False	NA	NA	False	NA	NA	NA	82077114	82060687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_82062428_82063278_82063426_82063632_82063760_82077004
ENSMUST00000156230.2	chr11	+	3147	9	FSM	ENSMUSG00000045980.14	ENSMUST00000156230.2	3147	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	14.6116391962025	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCTCCCTCTTGCTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	115078376	115136590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115134195
ENSMUST00000156246.2	chr4	-	2478	5	FSM	ENSMUSG00000043085.15	ENSMUST00000156246.2	2478	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	19.536824204563	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCTGCGTTGAGGATCA	NA	False	NA	-8	True	AATAAA	-12	NA	141345292	141341547	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_141342018_141342255_141343933_141344605_141344781_141344950_141345024_141345209
ENSMUST00000156291.2	chr19	-	2373	3	FSM	ENSMUSG00000024742.16	ENSMUST00000156291.2	2373	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	414.5	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCTGAATGTTTGAAAA	1929	False	NA	NA	False	AATAAA	-20	NA	10181533	10176495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10178462_10181051_10181384_10181458
ENSMUST00000156299.8	chrX	-	2080	10	FSM	ENSMUSG00000002010.18	ENSMUST00000156299.8	2080	10	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_7	119.009596044257	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830380
ENSMUST00000156319.8	chr8	+	1101	7	FSM	ENSMUSG00000031860.18	ENSMUST00000156319.8	1101	7	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	13.7446959466795	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGTTTTCAATACAG	2219	False	NA	5	True	ATTAAA	-18	NA	70285286	70324942	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70285502_70311729_70311804_70317547_70317665_70319117_70319254_70322678_70322833_70323227_70323335_70324644
ENSMUST00000156323.8	chr4	+	1419	14	FSM	ENSMUSG00000012126.17	ENSMUST00000156323.8	1419	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	29.9978302962932	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGCTTCACAAGGCTCT	NA	False	NA	14	True	AATAAA	-14	NA	133829925	133854086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133851231_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ENSMUST00000156326.2	chr11	+	2249	3	FSM	ENSMUSG00000034757.16	ENSMUST00000156326.2	2249	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	18.5	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCTTTGTGACTGC	NA	False	NA	16	True	AATAAA	-18	NA	102176021	102180063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_102176545_102178133_102178698_102178901
ENSMUST00000156359.2	chr5	+	854	6	FSM	ENSMUSG00000067274.11	ENSMUST00000156359.2	854	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	6380.49312827778	2649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGAAAAGGTAAGGCTG	NA	False	NA	NA	False	NA	NA	NA	115697595	115700614	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_115697599_115697845_115697948_115698777_115699064_115699157_115699305_115699391_115699578_115700484
ENSMUST00000156372.8	chr7	+	417	5	FSM	ENSMUSG00000040952.17	ENSMUST00000156372.8	417	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	11130.8331982606	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGAGACCTGGACAGGA	NA	False	NA	NA	False	NA	NA	NA	24584237	24588355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_24584275_24584560_24584632_24584876_24584978_24587706_24587891_24588331
ENSMUST00000156374.9	chr4	-	1909	9	FSM	ENSMUSG00000029022.19	ENSMUST00000156374.9	1909	9	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_8	23.8995292840675	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952956	147945247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ENSMUST00000156380.4	chr8	+	1193	4	FSM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_1	68.3715340376876	1962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTACTCTTCATTGATTT	5587	False	NA	NA	False	AAAACA	-14	NA	3671550	3674235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_3671612_3672341_3672429_3672592_3672626_3673223
ENSMUST00000156392.8	chr1	-	1122	6	FSM	ENSMUSG00000026049.12	ENSMUST00000156392.8	1122	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	166.814148081031	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGTGCCTTTGTTTTAC	NA	False	NA	-3	True	ATTAAA	-17	NA	44141598	44125775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139082_44141487
ENSMUST00000156400.9	chr18	+	1649	4	FSM	ENSMUSG00000024571.16	ENSMUST00000156400.9	1649	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	554.842920714202	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTGGGAATTCATTG	NA	False	NA	NA	False	AATAAA	-21	NA	80249979	80255956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_80250117_80250444_80250559_80253276_80253346_80254627
ENSMUST00000156421.2	chr3	-	438	3	FSM	ENSMUSG00000028062.16	ENSMUST00000156421.2	438	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	1321	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGTCTCACCTGCTT	1108	False	NA	-8	True	AATAAA	-12	NA	88460200	88457127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_88457312_88458002_88458093_88460036
ENSMUST00000156440.8	chr9	+	2984	14	FSM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_8	51.2505159448701	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGGTACAGCGTCCATT	NA	False	NA	NA	False	AATAAA	-18	NA	46184361	46193941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ENSMUST00000156473.8	chrX	-	1114	6	FSM	ENSMUSG00000046032.17	ENSMUST00000156473.8	1114	6	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	126.702170462861	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTCAGCTAGTTTCT	NA	False	NA	-11	True	NA	NA	NA	100266159	100141391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_100141834_100145973_100146042_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ENSMUST00000156503.2	chr11	-	375	2	FSM	ENSMUSG00000044894.15	ENSMUST00000156503.2	375	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	2943	False	NA	-8	True	AATAAA	-17	NA	53321658	53319779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_53319978_53321481
ENSMUST00000156520.8	chr9	+	3157	7	FSM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	12.9925192151313	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	4	True	AATAAA	-17	NA	122180672	122210589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
ENSMUST00000156529.8	chr7	+	2034	7	FSM	ENSMUSG00000030990.19	ENSMUST00000156529.8	2034	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	43.1689188601655	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTAGGTATGTTGCTCC	594	False	NA	16	True	AATAAA	-23	NA	101872234	101887774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ENSMUST00000156597.8	chr3	+	2450	13	FSM	ENSMUSG00000063052.10	ENSMUST00000156597.8	2450	13	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	215.046296694973	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742336	157772726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_157742514_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ENSMUST00000156638.8	chr7	-	2142	19	FSM	ENSMUSG00000031090.15	ENSMUST00000156638.8	2142	19	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	20.5376047745725	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTCTTTTTAAAGTGT	NA	False	NA	-16	True	TATAAA	-4	NA	143376524	143349586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143376395
ENSMUST00000156678.8	chr1	-	913	5	FSM	ENSMUSG00000026701.16	ENSMUST00000156678.8	913	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	765.536209137099	1769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGGCACCAAAACCTT	NA	False	NA	-20	True	ATTAAA	-2	NA	161078739	161069133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078563
ENSMUST00000156711.8	chr2	+	2809	5	FSM	ENSMUSG00000026848.15	ENSMUST00000156711.8	2809	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.5918570377542	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTCCTGAGCTTTTCC	NA	False	NA	10	True	AATAAA	-15	NA	30843198	30849024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_30843236_30843763_30844021_30845779_30845966_30846459_30846588_30846823
ENSMUST00000156713.8	chr16	-	3246	21	FSM	ENSMUSG00000022962.16	ENSMUST00000156713.8	3246	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	429.171000301745	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTAGCATTTATTTAAGA	1507	False	NA	NA	False	AATAAA	-23	NA	91440034	91418280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433390_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844
ENSMUST00000156722.2	chr5	+	3251	21	FSM	ENSMUSG00000029602.12	ENSMUST00000156722.2	3251	21	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	7.30479294709987	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGTGACGTGTTAAAATCG	NA	False	NA	11	True	TATAAA	-21	NA	120787252	120817662	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
ENSMUST00000156752.2	chr15	+	897	8	FSM	ENSMUSG00000022201.17	ENSMUST00000156752.2	897	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	211.292620383608	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTCTGGGGATGGATC	NA	False	NA	NA	False	NA	NA	NA	12160626	12184079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_12160777_12162184_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ENSMUST00000156898.5	chr6	+	2270	6	FSM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_1	248.294985853521	5189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAAGGGTGCTTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	113355075	113367409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
ENSMUST00000156915.3	chr15	-	606	4	FSM	ENSMUSG00000014313.16	ENSMUST00000156915.3	606	4	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_3	4177.00884472237	15989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGTAATTATATGGACA	39	False	NA	-25	True	NA	NA	NA	35938155	35932145	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_35932244_35935430_35935560_35937300_35937431_35937906
ENSMUST00000156940.8	chr10	-	1772	3	FSM	ENSMUSG00000019763.12	ENSMUST00000156940.8	1772	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	8	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACACTGAGTTCAAGTCC	5706	False	NA	NA	False	NA	NA	NA	4382344	4376093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_4377692_4379076_4379172_4382265
ENSMUST00000156969.8	chr11	-	2324	13	FSM	ENSMUSG00000000384.16	ENSMUST00000156969.8	2324	13	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	134.990406037697	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCCACTGGCTTTTCT	NA	False	NA	-5	True	AATAAA	-19	NA	6576043	6565597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ENSMUST00000156970.8	chr8	+	1708	13	FSM	ENSMUSG00000003808.19	ENSMUST00000156970.8	1708	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	180.621996322584	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583648	85595885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85583811_85587534_85587587_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ENSMUST00000157040.8	chr6	+	2383	12	FSM	ENSMUSG00000051855.16	ENSMUST00000157040.8	2383	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	96.8129319959523	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTCCGGCTTCCCCTCC	9958	False	NA	13	True	AATAAA	-19	NA	30733504	30748461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_30733613_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ENSMUST00000157063.2	chr10	+	722	8	FSM	ENSMUSG00000020153.15	ENSMUST00000157063.2	722	8	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_2	732.821330230511	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTCTGTGTGGACT	9725	False	NA	25	True	AATAAA	-16	NA	80085318	80092628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80085326_80088230_80088268_80088912_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUST00000157065.2	chr15	-	728	5	FSM	ENSMUSG00000005360.15	ENSMUST00000157065.2	728	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	27.3072792493137	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGACTTTCCTTTGTGGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	8739893	8715499	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_8715639_8717194_8717297_8717771_8717910_8738045_8738324_8739822
ENSMUST00000157338.3	chr13	+	133	1	FSM	ENSMUSG00000087963.3	ENSMUST00000157338.3	133	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCTACAACGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	49837776	49837909	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_49837800_49837900
ENSMUST00000157343.3	chr1	+	272	1	FSM	ENSMUSG00000087968.3	ENSMUST00000157343.3	272	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGACAGAATATTCTTAC	2311	False	NA	NA	False	NA	NA	NA	87704659	87704931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87704700_87704900
ENSMUST00000157583.3	chr6	+	136	1	FSM	ENSMUSG00000088208.3	ENSMUST00000157583.3	136	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGGAGACGAACAGAGCAT	1593	False	NA	2	True	GGGGCT	-27	NA	125098686	125098822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_125098700_125098800
ENSMUST00000157629.3	chr9	+	135	1	FSM	ENSMUSG00000088254.3	ENSMUST00000157629.3	135	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	694	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTTTAAAAACTTTTTAA	NA	False	NA	26	True	NA	NA	NA	64203212	64203347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_64203200_64203300
ENSMUST00000157683.3	chr13	+	134	1	FSM	ENSMUSG00000088308.3	ENSMUST00000157683.3	134	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	692	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCATGGGAGGGCCTTCC	NA	False	NA	4	True	NA	NA	NA	90247099	90247233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_90247100_90247200
ENSMUST00000158210.3	chr6	+	271	1	FSM	ENSMUSG00000088835.3	ENSMUST00000158210.3	271	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGGGATTCGAGGGCA	NA	False	NA	NA	False	NA	NA	NA	124692194	124692465	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_124692200_124692500
ENSMUST00000158365.3	chr4	-	165	1	FSM	ENSMUSG00000088990.3	ENSMUST00000158365.3	165	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAGTATCAGCAGTAGCC	1638	False	NA	-3	True	NA	NA	NA	132565858	132565693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_132565700_132565900
ENSMUST00000158468.5	chr1	+	84	1	FSM	ENSMUSG00000089093.5	ENSMUST00000158468.5	84	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGTCCTTGGTCAAAAGG	NA	False	NA	NA	False	NA	NA	NA	59743948	59744032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_59743900_59744000
ENSMUST00000158630.3	chr17	-	128	1	FSM	ENSMUSG00000089255.3	ENSMUST00000158630.3	128	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCGACTCTGCTGCCCC	4463	False	NA	NA	False	NA	NA	NA	24938777	24938649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24938600_24938800
ENSMUST00000158656.3	chr1	+	265	1	FSM	ENSMUSG00000089281.3	ENSMUST00000158656.3	265	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTATTTTAAACACCCCAT	9929	False	NA	NA	False	NA	NA	NA	87712277	87712542	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87712300_87712500
ENSMUST00000158992.3	chr6	-	325	1	FSM	ENSMUSG00000089617.3	ENSMUST00000158992.3	325	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCGCTAAGTGTTTGGA	8413	False	NA	NA	False	NA	NA	NA	125163646	125163321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_125163300_125163600
ENSMUST00000159018.8	chr5	+	741	6	FSM	ENSMUSG00000038722.18	ENSMUST00000159018.8	741	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	311.754133894003	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATTCTTTCTTTTAAG	NA	False	NA	16	True	AATAAA	-17	NA	145077217	145084884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145077253_145078114_145078171_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ENSMUST00000159121.2	chr15	-	769	4	FSM	ENSMUSG00000022234.16	ENSMUST00000159121.2	769	4	0	0	0	0	multi-exon	FALSE	canonical	3	5907	junction_1	275.901351130355	421	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAATCATTTTGGGGAAG	NA	False	NA	NA	False	NA	NA	NA	31601886	31595586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_31595990_31597556_31597722_31598145_31598207_31601746
ENSMUST00000159124.8	chr6	-	2600	15	FSM	ENSMUSG00000003500.14	ENSMUST00000159124.8	2600	15	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_14	59.8544152123146	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGATCCTGTTTCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	29216363	29200435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212167_29216070
ENSMUST00000159166.8	chr1	-	2977	13	FSM	ENSMUSG00000026024.15	ENSMUST00000159166.8	2977	13	0	0	0	0	multi-exon	FALSE	canonical	2	94	junction_2	9.94847838728226	43344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTGGGCCCCATTAAGC	NA	False	NA	NA	False	NA	NA	NA	59276390	59230767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ENSMUST00000159168.3	chr6	+	1975	3	FSM	ENSMUSG00000089862.9	ENSMUST00000159168.3	1975	3	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	4.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTTCATTGCATTAGTA	NA	False	NA	NA	False	AATAAA	-29	NA	8270465	8428767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_8270582_8373905_8373968_8426970
ENSMUST00000159239.8	chr13	-	1855	13	FSM	ENSMUSG00000039233.13	ENSMUST00000159239.8	1855	13	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_7	16.4519502390041	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAAAGGAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	14214206	14177648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
ENSMUST00000159252.8	chr6	-	3744	14	FSM	ENSMUSG00000040669.15	ENSMUST00000159252.8	3744	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	370.911239960444	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAAGTTGGCCTCCAT	9078	False	NA	-31	True	ATTAAA	-22	NA	122316615	122294708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309613_122310249_122310400_122311028_122311110_122313816_122313975_122316556
ENSMUST00000159268.2	chr9	+	428	2	FSM	ENSMUSG00000090023.2	ENSMUST00000159268.2	428	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAGAATAAATGTTCCCC	NA	False	NA	NA	False	NA	NA	NA	14756908	14759131	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_14757143_14758937
ENSMUST00000159313.2	chr19	+	2327	2	FSM	ENSMUSG00000090235.2	ENSMUST00000159313.2	2327	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTTTTATTATTATTAT	NA	False	NA	NA	False	AATAAA	-19	NA	42767470	42769893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_42767783_42767878
ENSMUST00000159327.2	chr15	+	2186	3	FSM	ENSMUSG00000022346.18	ENSMUST00000159327.2	2186	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	7	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTCTTTTTCCTCTT	NA	False	NA	NA	False	AATAAA	-31	NA	61857412	61862223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_61857801_61859358_61860128_61861194
ENSMUST00000159342.8	chr4	+	5456	42	FSM	ENSMUSG00000038368.17	ENSMUST00000159342.8	5456	42	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_33	32.2118766455104	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAATGTGACTTTTATT	NA	False	NA	8	True	AGTAAA	-17	NA	88039535	88329241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ENSMUST00000159364.3	chr8	-	392	2	FSM	ENSMUSG00000089665.3	ENSMUST00000159364.3	392	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTGATGTCTTTCTAT	NA	False	NA	-4	True	AATACA	-15	NA	3722362	3721187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_3721397_3722179
ENSMUST00000159433.8	chr6	+	2025	4	FSM	ENSMUSG00000089862.9	ENSMUST00000159433.8	2025	4	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	5.43650214343336	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAATGGCTTTCATTGC	10	True	NA	NA	False	AATAAA	-22	NA	8259429	8428760	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_8259494_8270472_8270582_8373905_8373968_8426970
ENSMUST00000159514.8	chr16	+	3756	6	FSM	ENSMUSG00000022698.18	ENSMUST00000159514.8	3756	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	773.749675282646	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATCTGTCTGTAACTGT	NA	False	NA	19	True	AATAAA	-19	NA	43960192	43982837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_43960475_43965143_43965282_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ENSMUST00000159531.3	chr15	+	939	10	FSM	ENSMUSG00000023010.16	ENSMUST00000159531.3	939	10	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	587.59549788592	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTACTTAGTGGTTT	NA	False	NA	7	True	AATGAA	-13	NA	99291490	99306491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_99291576_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUST00000159594.2	chr6	-	682	2	FSM	ENSMUSG00000012483.5	ENSMUST00000159594.2	682	2	0	0	0	0	multi-exon	FALSE	canonical	3	1539	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAAAACATCTTTGATA	-15	True	NA	NA	False	TTTAAA	-16	NA	8259140	8257220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_8257762_8258999
ENSMUST00000159634.8	chr19	+	1684	12	FSM	ENSMUSG00000071657.13	ENSMUST00000159634.8	1684	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	50.3060057535483	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8815092	8826031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8815229_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ENSMUST00000159663.8	chr1	+	346	8	FSM	ENSMUSG00000053332.14	ENSMUST00000159663.8	346	8	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_6	1912.24889508	3050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160865794_160865843_160866026
ENSMUST00000159693.2	chr19	-	705	4	FSM	ENSMUSG00000079478.10	ENSMUST00000159693.2	705	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	231.015631986717	2139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGTTTGTTCTTTCTTGG	NA	False	NA	-1	True	AAAACA	-13	NA	5781760	5780334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5780741_5781268_5781354_5781466_5781624_5781703
ENSMUST00000159697.2	chr17	-	1800	8	FSM	ENSMUSG00000023832.15	ENSMUST00000159697.2	1800	8	0	0	0	0	multi-exon	FALSE	canonical	3	922	junction_2	94.6542580734146	1938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGCAGGGCCCCCAAAA	NA	False	NA	NA	False	NA	NA	NA	13179258	13162329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881
ENSMUST00000159706.8	chr1	+	557	11	FSM	ENSMUSG00000053332.14	ENSMUST00000159706.8	557	11	0	0	0	0	multi-exon	TRUE	canonical	3	3085	junction_7	1053.46856146731	34509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862636	160866107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUST00000159715.8	chr15	-	3796	12	FSM	ENSMUSG00000037280.13	ENSMUST00000159715.8	3796	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	26.9471475360673	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTTGGATTTGAGTT	9875	False	NA	-7	True	AATAAA	-19	NA	100627257	100589693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100627187
ENSMUST00000159739.8	chr3	-	1939	5	FSM	ENSMUSG00000038550.11	ENSMUST00000159739.8	1939	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	14.8723737177358	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTTTTTTTTTTTTT	NA	False	NA	-1	True	ATTAAA	-15	NA	95789517	95785814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492
ENSMUST00000159801.8	chr15	+	3583	17	FSM	ENSMUSG00000022364.15	ENSMUST00000159801.8	3583	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.3880777818462	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCTCCAAATC	NA	False	NA	82	True	NA	NA	NA	57776400	57822878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_57776509_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732
ENSMUST00000159813.8	chr5	-	1341	8	FSM	ENSMUSG00000001844.11	ENSMUST00000159813.8	1341	8	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_2	78.3753397284568	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5305	False	NA	-14	True	AATACA	-25	NA	143314975	143302244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_143302588_143305985_143306231_143307509_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
ENSMUST00000159817.9	chr1	-	2482	8	FSM	ENSMUSG00000026694.20	ENSMUST00000159817.9	2482	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	33.4651814181089	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAAAGTTGGTTTATCT	NA	False	NA	-11	True	NA	NA	NA	162376091	162361247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373814_162374097_162375672
ENSMUST00000159890.8	chr1	+	1066	9	FSM	ENSMUSG00000053332.14	ENSMUST00000159890.8	1066	9	0	0	0	0	multi-exon	FALSE	canonical	3	3085	junction_5	979.227469743369	2016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862757	160866109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160862765_160863321_160863375_160863552_160863815_160864118_160864150_160864389_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUST00000159893.8	chr13	-	1626	15	FSM	ENSMUSG00000039233.13	ENSMUST00000159893.8	1626	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	44.8594744616964	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTCTGCCCTTTCTGT	NA	False	NA	-2	True	AATAAA	-17	NA	14214164	14172533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14203860_14203992_14214122
ENSMUST00000159903.2	chr6	-	2934	2	FSM	ENSMUSG00000045962.17	ENSMUST00000159903.2	2934	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGGTTGTTCTTTCTGA	NA	False	NA	-1	True	AATAAA	-21	NA	119904222	119900929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_119903649_119904007
ENSMUST00000159917.8	chr10	-	2491	8	FSM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	203.876012741638	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACCAGTCTGGATCCTT	NA	False	NA	-8	True	AATAAA	-12	NA	7539067	7505144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUST00000159918.2	chr1	-	1404	3	FSM	ENSMUSG00000041889.8	ENSMUST00000159918.2	1404	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	3.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGAGTCCGTCCTTC	NA	False	NA	0	True	NA	NA	NA	135301188	135298797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_135299735_135299934_135300103_135300889
ENSMUST00000159924.8	chr7	-	805	9	FSM	ENSMUSG00000009687.15	ENSMUST00000159924.8	805	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	43.2810582125715	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGGCCTCTGTCTTCT	2720	False	NA	-10	True	GATAAA	-16	NA	30741503	30732157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30737245_30737354_30738462_30738520_30739607_30739683_30740821_30740883_30741471
ENSMUST00000160004.2	chr5	+	405	2	FSM	ENSMUSG00000038722.18	ENSMUST00000160004.2	405	2	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTGGAGAATGCGTGT	NA	False	NA	NA	False	NA	NA	NA	145077205	145078472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145077253_145078114
ENSMUST00000160013.8	chr14	-	3826	4	FSM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	22.3755819291179	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTACGGGGTCACTTTC	NA	False	NA	-4	True	AATAAA	-18	NA	20027317	19922626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025
ENSMUST00000160021.8	chr13	+	2682	4	FSM	ENSMUSG00000021578.18	ENSMUST00000160021.8	2682	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	196.493143787654	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACTGCATTGGCCTGGT	4358	False	NA	NA	False	NA	NA	NA	74498435	74510820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_74498528_74500974_74501106_74504574_74504937_74508723
ENSMUST00000160032.2	chr6	+	288	1	FSM	ENSMUSG00000089936.2	ENSMUST00000160032.2	288	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTTCCTGAAGTCAAAC	NA	False	NA	NA	False	NA	NA	NA	119982958	119983246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_119983000_119983200
ENSMUST00000160047.8	chr3	+	1196	4	FSM	ENSMUSG00000050150.17	ENSMUST00000160047.8	1196	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	29.6348143611905	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGGTCTTCAAATTTAA	NA	False	NA	14	True	AATAAA	-25	NA	135053806	135063828	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217
ENSMUST00000160052.2	chr9	+	444	1	FSM	ENSMUSG00000090136.5	ENSMUST00000160052.2	444	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27973	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAATGGGGCAAGCTCA	NA	False	NA	NA	False	AATAAA	-43	NA	37164217	37164661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_37164200_37164700
ENSMUST00000160075.2	chr5	+	928	6	FSM	ENSMUSG00000038722.18	ENSMUST00000160075.2	928	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	298.93035978301	2631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCTACATTCTTTCTTTT	NA	False	NA	13	True	AATAAA	-14	NA	145077224	145084881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145077374_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ENSMUST00000160079.2	chr17	-	487	1	FSM	ENSMUSG00000089883.2	ENSMUST00000160079.2	487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGTACACAAAGAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	14083065	14082578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_14082600_14083100
ENSMUST00000160108.8	chr10	+	1671	3	FSM	ENSMUSG00000038240.14	ENSMUST00000160108.8	1671	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	2.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATATCAGAATATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	43097512	43222515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_43098057_43174794_43174930_43221523
ENSMUST00000160113.8	chr12	-	2019	7	FSM	ENSMUSG00000079036.11	ENSMUST00000160113.8	2019	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	112.096312755297	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTATCTGTCTTTGAG	NA	False	NA	-53	True	AATAAA	-22	NA	87490596	87474846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
ENSMUST00000160124.2	chr9	+	501	4	FSM	ENSMUSG00000084786.10	ENSMUST00000160124.2	501	4	0	0	0	0	multi-exon	FALSE	canonical	3	1046	junction_3	68.2658203072535	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGCTGCTGTCATACTT	NA	False	NA	16	True	AATAAA	-13	NA	20556336	20558071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_20556556_20556701_20556786_20556917_20556956_20557911
ENSMUST00000160141.2	chr19	-	826	2	FSM	ENSMUSG00000079478.10	ENSMUST00000160141.2	826	2	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_1	0	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGTTTGTTCTTTCTTGG	NA	False	NA	-1	True	AAAACA	-13	NA	5781688	5780334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5780741_5781268
ENSMUST00000160163.8	chr6	-	3289	15	FSM	ENSMUSG00000040669.15	ENSMUST00000160163.8	3289	15	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_12	285.154952506134	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACACCTACCCTAATCCA	9122	False	NA	-11	True	AATAAA	-14	NA	122316571	122295261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316556
ENSMUST00000160172.8	chr15	+	1537	7	FSM	ENSMUSG00000022553.17	ENSMUST00000160172.8	1537	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	244.747999651342	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGAGTTTGTGGGGGCG	NA	False	NA	31	True	AATAAA	-23	NA	76235526	76238580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76235860_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76238046
ENSMUST00000160180.9	chr18	+	833	5	FSM	ENSMUSG00000024646.15	ENSMUST00000160180.9	833	5	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_4	54.2425110038243	4317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTCTGTTTGGTGT	NA	False	NA	19	True	AATATA	-24	NA	84869462	84897996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_84869733_84889629_84889759_84891264_84891295_84895951_84895987_84897627
ENSMUST00000160197.6	chr6	-	5439	22	FSM	ENSMUSG00000033769.17	ENSMUST00000160197.6	5439	22	0	0	0	0	multi-exon	TRUE	canonical	3	201	junction_13	26.9684454901315	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046495	84595468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ENSMUST00000160226.8	chr3	-	617	3	FSM	ENSMUSG00000027860.16	ENSMUST00000160226.8	617	3	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	64	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCTATGTACTTGTGTG	NA	False	NA	-11	True	NA	NA	NA	102074289	102070501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_102070850_102072670_102072804_102074153
ENSMUST00000160246.8	chr5	+	1565	10	FSM	ENSMUSG00000029130.13	ENSMUST00000160246.8	1565	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	13.0421917418852	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAGCTAGTGTCTGACC	NA	False	NA	91	True	AATAAA	-21	NA	29401003	29430522	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_29401083_29401577_29401644_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411171_29411297_29411693_29411803_29429114_29429283_29430040
ENSMUST00000160271.8	chr4	-	2604	20	FSM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_17	99.0531349615264	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	-1	True	CATAAA	-25	NA	108975233	108918846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ENSMUST00000160326.8	chr16	-	4488	31	FSM	ENSMUSG00000022710.18	ENSMUST00000160326.8	4488	31	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_28	198.142330998031	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	6532	False	NA	NA	False	AATAAA	-21	NA	8556284	8507463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529996_8530057_8534378_8534484_8556067
ENSMUST00000160337.2	chr10	+	1138	8	FSM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_7	327.562862014955	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTGATGTTGTTGT	NA	False	NA	13	True	ATTAAA	-14	NA	72490727	72504997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
ENSMUST00000160349.2	chr17	+	3139	8	FSM	ENSMUSG00000025737.6	ENSMUST00000160349.2	3139	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	15.8449116277055	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTGGCCACTTGTCA	NA	False	NA	9	True	AATAAA	-11	NA	26042622	26047695	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046507_26046626_26046968_26047127_26047313_26047388
ENSMUST00000160372.9	chr10	-	1948	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160372.9	1948	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	66.5	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAATTTGTTTGAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	29238043	29222171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_29223880_29230287_29230444_29237959
ENSMUST00000160399.8	chr10	+	1845	6	FSM	ENSMUSG00000019883.12	ENSMUST00000160399.8	1845	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	32.6643536596088	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTATGTCCATTCCAG	NA	False	NA	2	True	AATAGA	-13	NA	29189161	29221556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_29189294_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
ENSMUST00000160403.8	chr7	+	1425	7	FSM	ENSMUSG00000054065.13	ENSMUST00000160403.8	1425	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	7.83156008298049	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCCAGCTCCGTGTGT	614	False	NA	16	True	ATTAAA	-14	NA	140668058	140670420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
ENSMUST00000160405.8	chr16	-	4745	32	FSM	ENSMUSG00000022710.18	ENSMUST00000160405.8	4745	32	0	0	0	0	multi-exon	FALSE	canonical	2	419	junction_31	128.599831855963	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGCTGTGGAAGCCGAG	NA	False	NA	NA	False	AATAAA	-26	NA	8610172	8507458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ENSMUST00000160422.8	chr5	+	1756	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160422.8	1756	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	266.097419631784	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145104056	145118850	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115567_145115739_145117945
ENSMUST00000160425.8	chr14	-	1281	8	FSM	ENSMUSG00000068245.15	ENSMUST00000160425.8	1281	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	162.073805309023	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59602893	59586180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_59586838_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59602815
ENSMUST00000160429.8	chr1	+	759	10	FSM	ENSMUSG00000053332.14	ENSMUST00000160429.8	759	10	0	0	0	0	multi-exon	FALSE	canonical	3	3085	junction_6	1099.1542202985	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTGTGAAGTGTGCAT	NA	False	NA	17	True	ATTAAA	-13	NA	160862735	160866104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUST00000160439.8	chr1	+	1206	10	FSM	ENSMUSG00000026197.13	ENSMUST00000160439.8	1206	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	30.0361921605614	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGCTGTTTCTTTTTC	2032	False	NA	16	True	AGTAAA	-22	NA	75145289	75148273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
ENSMUST00000160471.8	chr1	+	3841	10	FSM	ENSMUSG00000039210.17	ENSMUST00000160471.8	3841	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.6693120329882	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTCATGGTGCCCACAT	NA	False	NA	NA	False	AATAAA	-17	NA	186947939	187082920	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_186948104_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
ENSMUST00000160486.8	chr1	+	1878	9	FSM	ENSMUSG00000026641.14	ENSMUST00000160486.8	1878	9	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	10.9594422759555	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTCTTCCTCCT	6808	False	NA	63	True	GATAAA	-15	NA	171238951	171246325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208
ENSMUST00000160507.8	chr14	+	2229	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	0	0	0	0	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	3385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGAGTTATGGGTTTT	NA	False	NA	11	True	AATAAA	-14	NA	73790104	73833582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ENSMUST00000160579.2	chr16	-	1376	2	FSM	ENSMUSG00000022858.17	ENSMUST00000160579.2	1376	2	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCTATGGCAAATTTAAA	NA	False	NA	NA	False	AATAAA	-13	NA	22084668	22076813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_22078012_22084490
ENSMUST00000160590.2	chr19	-	840	2	FSM	ENSMUSG00000024797.15	ENSMUST00000160590.2	840	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTAACTTTTGTTTC	1018	False	NA	1	True	ATTAAA	-20	NA	6127230	6125932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6126523_6126980
ENSMUST00000160597.8	chr16	+	6230	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	0	0	0	0	multi-exon	TRUE	canonical	3	145	junction_5	76.2263931339013	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCTTTCTCCCTACACT	NA	False	NA	NA	False	NA	NA	NA	29398151	29473702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ENSMUST00000160629.8	chr5	+	1713	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160629.8	1713	8	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_6	186.36939400129	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	23	True	ATTAAA	-15	NA	145104022	145118851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
ENSMUST00000160664.8	chr17	+	3784	20	FSM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	42.2814078706415	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGATGGGAGAAAGGCGT	NA	False	NA	31	True	AATAAA	-28	NA	66090360	66148917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ENSMUST00000160683.8	chr12	+	1027	10	FSM	ENSMUSG00000060073.10	ENSMUST00000160683.8	1027	10	0	0	0	0	multi-exon	FALSE	canonical	3	3391	junction_7	435.06460425613	2720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGGGTAATTGA	4770	False	NA	1	True	ATTAAA	-12	NA	71021444	71041275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUST00000160697.2	chr6	+	600	6	FSM	ENSMUSG00000040242.15	ENSMUST00000160697.2	600	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	145.205509537345	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAGAATCCTTTTTGAAC	NA	False	NA	NA	False	AATAAA	-26	NA	146489818	146498829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_146489893_146490237_146490356_146491391_146491535_146494131_146494246_146496673_146496788_146498792
ENSMUST00000160708.8	chr8	+	2908	19	FSM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_10	31.5352536413174	2046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCGGCTTCCTAGTAAC	4387	False	NA	NA	False	NA	NA	NA	3680954	3693644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ENSMUST00000160776.2	chr13	-	909	4	FSM	ENSMUSG00000039233.13	ENSMUST00000160776.2	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	12.4988888395018	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCCAGGGCTACACAGAG	NA	False	NA	NA	False	NA	NA	NA	14214202	14193859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_14194473_14202282_14202368_14203860_14203992_14214122
ENSMUST00000160853.8	chr15	+	1651	8	FSM	ENSMUSG00000022553.17	ENSMUST00000160853.8	1651	8	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	163.413086179455	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	False	NA	24	True	AATAAA	-16	NA	76235493	76238573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76235860_76236666_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ENSMUST00000160864.8	chr12	+	859	10	FSM	ENSMUSG00000060073.10	ENSMUST00000160864.8	859	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1213.70727855801	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4782	False	NA	5	True	ATTAAA	-16	NA	71021456	71041279	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_71021542_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUST00000160874.8	chr9	+	412	5	FSM	ENSMUSG00000084786.10	ENSMUST00000160874.8	412	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	478.321740567999	2288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGCTGCTGTCATACTT	NA	False	NA	16	True	AATAAA	-13	NA	20556130	20558071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_20556190_20556488_20556556_20556701_20556790_20556917_20556956_20557911
ENSMUST00000160880.2	chr12	+	362	4	FSM	ENSMUSG00000021040.16	ENSMUST00000160880.2	362	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1761.37452639188	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTTTATTTGAAATGAGG	NA	False	NA	36	True	AATAAA	-23	NA	87490715	87496694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_87490797_87494333_87494393_87496069_87496171_87496573
ENSMUST00000160885.2	chr17	-	1732	4	FSM	ENSMUSG00000050410.16	ENSMUST00000160885.2	1732	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	32.9983164553722	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTGCGTTGAATCTAAG	9372	False	NA	-8	True	AATAAA	-17	NA	35827682	35823633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35824082_35825370_35825918_35826774_35827437_35827607
ENSMUST00000160890.8	chr14	-	1812	9	FSM	ENSMUSG00000006289.15	ENSMUST00000160890.8	1812	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	204.557105413134	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTAGGTTGTGTTTTTC	NA	False	NA	-5	True	AATAAA	-20	NA	51162329	51153142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154961_51155292_51155389_51157072_51157277_51157386_51157507_51162120
ENSMUST00000160902.8	chr9	+	3374	26	FSM	ENSMUSG00000032115.15	ENSMUST00000160902.8	3374	26	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	146.389890361322	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATACATCAGGGTTG	NA	False	NA	NA	False	NA	NA	NA	44290919	44302399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44291235_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ENSMUST00000160941.8	chr3	+	1407	4	FSM	ENSMUSG00000050150.17	ENSMUST00000160941.8	1407	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	61.0136596727869	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATTGTATTCATTG	NA	False	NA	NA	False	NA	NA	NA	135053806	135064067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135053859_135054090_135054535_135060771_135060833_135063217
ENSMUST00000160972.8	chr1	+	1358	5	FSM	ENSMUSG00000026150.15	ENSMUST00000160972.8	1358	5	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_3	77.3090389281874	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	13	True	AATAAA	-13	NA	82706949	82730111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_82707158_82708833_82709004_82713139_82713229_82728240_82728326_82729305
ENSMUST00000161012.8	chr17	-	1665	4	FSM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	21.6846079563875	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCGTTGAATCTAAGTCT	9333	False	NA	-5	True	AATAAA	-20	NA	35827721	35823630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35824082_35825370_35825918_35826774_35827328_35827607
ENSMUST00000161021.2	chr3	-	818	5	FSM	ENSMUSG00000027860.16	ENSMUST00000161021.2	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	100.023434754062	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTCCAGGAGGAAGTT	NA	False	NA	NA	False	AAAACA	-27	NA	102074246	102065495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088_102073128_102074153
ENSMUST00000161045.8	chr6	+	1604	11	FSM	ENSMUSG00000030166.15	ENSMUST00000161045.8	1604	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	16.2419210686421	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTTCAGGTTTTTA	NA	False	NA	8	True	ATTAAA	-21	NA	119879663	119899789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_119879797_119888008_119888103_119889962_119890065_119891130_119891199_119892194_119892314_119892927_119893004_119895547_119895748_119895886_119896039_119897070_119897152_119897767_119897990_119899432
ENSMUST00000161046.9	chr16	-	4003	31	FSM	ENSMUSG00000022710.18	ENSMUST00000161046.9	4003	31	0	0	0	0	multi-exon	FALSE	canonical	2	328	junction_30	128.088897081502	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATACACTGAGAACATTG	6610	False	NA	NA	False	NA	NA	NA	8556206	8508009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ENSMUST00000161054.8	chr6	-	3612	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCTTCACAAAACAGGAG	9089	False	NA	-131	True	NA	NA	NA	122316604	122294808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ENSMUST00000161074.8	chr10	-	875	5	FSM	ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	42.7492689995981	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTGTCTTCAGACACAC	NA	False	NA	NA	False	NA	NA	NA	30494475	30484136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
ENSMUST00000161094.8	chr5	-	1824	17	FSM	ENSMUSG00000025533.16	ENSMUST00000161094.8	1824	17	0	0	0	0	multi-exon	FALSE	canonical	1	102	junction_3	46.3975686324187	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGAGAGATGTGTCAGT	NA	False	NA	NA	False	CATAAA	-21	NA	130053222	130040098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
ENSMUST00000161106.8	chr1	+	1285	9	FSM	ENSMUSG00000026197.13	ENSMUST00000161106.8	1285	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	45.8732969711138	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGAGTGCTGTTTCTT	2032	False	NA	12	True	AGTAAA	-18	NA	75145289	75148269	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_75145352_75145477_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147398_75147619_75147693_75147879
ENSMUST00000161114.2	chr9	-	2945	19	FSM	ENSMUSG00000032122.16	ENSMUST00000161114.2	2945	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	22.9957725583542	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTGCCTGGTTCTCACT	NA	False	NA	-3	True	AATAAA	-10	NA	37166710	37141611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_37142953_37144348_37144406_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ENSMUST00000161123.8	chr10	-	2607	9	FSM	ENSMUSG00000019795.18	ENSMUST00000161123.8	2607	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	305.06638621782	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGATCCTTGGTAGTCA	NA	False	NA	0	True	AATAAA	-20	NA	7539028	7505136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524230_7524425_7524814_7524920_7538838
ENSMUST00000161137.8	chr3	-	1927	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	0	0	0	0	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	3894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGCTATAAGACAATT	NA	False	NA	-11	True	ATTAAA	-13	NA	75464163	75423796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
ENSMUST00000161154.2	chr12	-	1824	11	FSM	ENSMUSG00000021266.17	ENSMUST00000161154.2	1824	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	739.608714118486	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108859123	108825959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_108826260_108827194_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859085
ENSMUST00000161172.3	chr2	-	1041	4	FSM	ENSMUSG00000074656.13	ENSMUST00000161172.3	1041	4	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_3	5764.94448272391	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAGAAGAA	3772	False	NA	-51	True	NA	NA	NA	154734715	154726294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_154726367_154729623_154729728_154730102_154730281_154734028
ENSMUST00000161181.8	chr5	+	2467	13	FSM	ENSMUSG00000029635.16	ENSMUST00000161181.8	2467	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	40.014580675882	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAGGTGTTATGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	146168059	146239641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_146168145_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229448_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ENSMUST00000161186.8	chr16	+	3153	29	FSM	ENSMUSG00000038084.17	ENSMUST00000161186.8	3153	29	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_5	68.8867378604999	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTGTCAAGTGAGTGAT	NA	False	NA	NA	False	AAGAAA	-41	NA	29398197	29467818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754
ENSMUST00000161187.8	chr9	-	2847	14	FSM	ENSMUSG00000042790.17	ENSMUST00000161187.8	2847	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_11	14.9741394434206	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAATGCATCTGGGGG	9590	False	NA	NA	False	ATTAAA	-14	NA	45817705	45774988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811508_45811555_45816103_45816218_45817649
ENSMUST00000161189.8	chr1	-	4189	25	FSM	ENSMUSG00000041879.14	ENSMUST00000161189.8	4189	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	161.892405756622	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358229	135312210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
ENSMUST00000161198.4	chr6	-	1021	2	FSM	ENSMUSG00000057103.12	ENSMUST00000161198.4	1021	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAATGCATGTGATGGCT	9864	False	NA	NA	False	NA	NA	NA	85892669	85887135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_85888003_85892515
ENSMUST00000161211.8	chr12	-	1059	8	FSM	ENSMUSG00000002679.15	ENSMUST00000161211.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_7	64.9976451692753	2264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTCCCTTGTCTCTGA	NA	False	NA	1	True	AATAAA	-25	NA	81641780	81620330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
ENSMUST00000161229.8	chr1	+	2556	4	FSM	ENSMUSG00000053332.14	ENSMUST00000161229.8	2556	4	0	0	0	0	multi-exon	FALSE	canonical	3	4541	junction_3	423.601489872524	2494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUST00000161250.8	chr15	+	1148	11	FSM	ENSMUSG00000023010.16	ENSMUST00000161250.8	1148	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	709.276455269735	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAAATTTTTTGATC	NA	False	NA	-27	True	AATGAA	-37	NA	99290866	99306515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_99290922_99297537_99297753_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUST00000161262.8	chr18	+	1021	5	FSM	ENSMUSG00000033632.17	ENSMUST00000161262.8	1021	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	17.7200451466693	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAGAGAGGAAATGAAA	NA	False	NA	NA	False	AATAAA	-5	NA	25302070	25322290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25321616
ENSMUST00000161302.8	chr14	+	860	7	FSM	ENSMUSG00000060579.14	ENSMUST00000161302.8	860	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	3.53160335006952	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGTGTTCTGGAAAAC	NA	False	NA	NA	False	AATAAA	-18	NA	12016314	12919681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_12016405_12048159_12048279_12599597_12599744_12607726_12607757_12705964_12706034_12896261_12896361_12919374
ENSMUST00000161311.8	chr15	+	2058	14	FSM	ENSMUSG00000022550.19	ENSMUST00000161311.8	2058	14	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_9	18.5325557142499	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATCGTTTTCTTTGT	3156	False	NA	NA	False	NA	NA	NA	76460611	76480009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ENSMUST00000161318.8	chr9	+	4489	26	FSM	ENSMUSG00000032115.15	ENSMUST00000161318.8	4489	26	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	153.155429547894	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTATGTGTTTGCTTCTT	NA	False	NA	1	True	AATAAA	-17	NA	44290869	44303660	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44291039_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ENSMUST00000161322.3	chr14	-	524	4	FSM	ENSMUSG00000041625.16	ENSMUST00000161322.3	524	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.6131264181639	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGCTGTTGCTGTTTGG	NA	False	NA	-13	True	ATTAAA	-18	NA	123150560	123128282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_123128494_123129020_123129229_123137887_123137945_123150512
ENSMUST00000161329.2	chr15	+	914	6	FSM	ENSMUSG00000022364.15	ENSMUST00000161329.2	914	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	111.494215096569	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57821808	57833463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ENSMUST00000161410.8	chr12	-	2764	10	FSM	ENSMUSG00000021266.17	ENSMUST00000161410.8	2764	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	620.186073232944	2342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	False	NA	-31	True	AATAAA	-19	NA	108859124	108825955	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859085
ENSMUST00000161428.8	chr10	-	1073	7	FSM	ENSMUSG00000019795.18	ENSMUST00000161428.8	1073	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	348.511477572834	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCATTCTTGCTTTATT	NA	False	NA	1	True	AATAAA	-21	NA	7524919	7513493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_7513990_7514631_7514760_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814
ENSMUST00000161455.8	chr11	+	3989	23	FSM	ENSMUSG00000020898.19	ENSMUST00000161455.8	3989	23	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	127.927374799691	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5129	False	NA	18	True	AATAAA	-18	NA	68906779	68927296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_68906941_68911855_68911942_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ENSMUST00000161459.8	chr14	-	2995	14	FSM	ENSMUSG00000071350.13	ENSMUST00000161459.8	2995	14	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_12	10.965249034588	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTGTGATTATTAT	NA	False	NA	NA	False	TATAAA	-13	NA	59678333	59639457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
ENSMUST00000161460.8	chr3	+	3777	9	FSM	ENSMUSG00000027804.14	ENSMUST00000161460.8	3777	9	0	0	0	0	multi-exon	FALSE	canonical	3	2177	junction_4	229.457478359281	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAATCTCATTTTAAAAT	NA	False	NA	16	True	AATAAA	-15	NA	79498648	79510583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_79498865_79500916_79501058_79502508_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ENSMUST00000161461.8	chr1	+	793	11	FSM	ENSMUSG00000053332.14	ENSMUST00000161461.8	793	11	0	0	0	0	multi-exon	FALSE	canonical	3	1206	junction_6	1709.07735342787	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862747	160866109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUST00000161523.8	chr1	+	3258	23	FSM	ENSMUSG00000026519.17	ENSMUST00000161523.8	3258	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	11.3524490385799	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGCCTCTCATGCTT	NA	False	NA	6	True	AATAAA	-22	NA	180771599	180802668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180771662_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ENSMUST00000161527.8	chr15	+	1743	9	FSM	ENSMUSG00000022553.17	ENSMUST00000161527.8	1743	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	277.590075471008	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAACCTGGGAGTTTG	NA	False	NA	23	True	AATAAA	-15	NA	76235493	76238572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76235860_76236195_76236242_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ENSMUST00000161542.8	chr18	-	2736	10	FSM	ENSMUSG00000038425.19	ENSMUST00000161542.8	2736	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	94.1501296524877	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTCACTGTAAGTTGTG	NA	False	NA	-12	True	AATAAA	-23	NA	70663209	70641750	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70662821
ENSMUST00000161576.8	chr8	+	1952	8	FSM	ENSMUSG00000031770.17	ENSMUST00000161576.8	1952	8	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_6	55.7864002152818	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCAAGCTTGCTGTGTCT	NA	False	NA	47	True	AATAAA	-40	NA	95113065	95122005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_95113367_95115983_95116062_95116148_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
ENSMUST00000161587.8	chr17	+	1786	5	FSM	ENSMUSG00000043592.16	ENSMUST00000161587.8	1786	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.7092249953019	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATACTGGTACTTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	48769362	48775708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_48769467_48770389_48770492_48771469_48771571_48771943_48772058_48774343
ENSMUST00000161598.8	chr12	-	897	7	FSM	ENSMUSG00000002679.15	ENSMUST00000161598.8	897	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	187.349717551606	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCTTTCCCTTGTCTC	NA	False	NA	-2	True	AATAAA	-22	NA	81641737	81620333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_81620735_81621298_81621327_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
ENSMUST00000161608.8	chr1	-	2495	7	FSM	ENSMUSG00000054770.17	ENSMUST00000161608.8	2495	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	29.1228241914978	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTTTCTGTGACTAC	NA	False	NA	-4	True	AATAAA	-20	NA	58008683	57994411	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004509_58004700_58006655_58006883_58008565
ENSMUST00000161623.8	chr1	+	403	6	FSM	ENSMUSG00000053332.14	ENSMUST00000161623.8	403	6	0	0	0	0	multi-exon	FALSE	canonical	3	3085	junction_2	1008.25591989336	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160864264	160866109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUST00000161630.8	chr16	+	3856	6	FSM	ENSMUSG00000022529.12	ENSMUST00000161630.8	3856	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	76.2532622252976	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAATCTTTATTGG	NA	False	NA	12	True	AATAAA	-21	NA	3562095	3568654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_3563377_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566575
ENSMUST00000161639.8	chr13	+	3157	21	FSM	ENSMUSG00000021666.17	ENSMUST00000161639.8	3157	21	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	31.6045487232455	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	AATAAA	-25	NA	97274485	97312959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ENSMUST00000161651.2	chr15	+	582	2	FSM	ENSMUSG00000022313.11	ENSMUST00000161651.2	582	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTCAGTTGTTGCTTTG	NA	False	NA	27	True	AGTAAA	-24	NA	51740873	51746085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_51741040_51745669
ENSMUST00000161706.2	chr17	-	183	2	FSM	ENSMUSG00000090101.2	ENSMUST00000161706.2	183	2	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	0	4249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATCGTATGTTGGTGTTT	4301	False	NA	-8	True	AATAAA	-15	NA	24938939	24938504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24938582_24938833
ENSMUST00000161712.8	chr12	-	2154	8	FSM	ENSMUSG00000079036.11	ENSMUST00000161712.8	2154	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	99.4164606745846	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490606	87474849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
ENSMUST00000161726.2	chr3	+	3213	10	FSM	ENSMUSG00000034544.18	ENSMUST00000161726.2	3213	10	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	109.678092391404	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGACTGCTTCCTCCC	NA	False	NA	16	True	AATAAA	-16	NA	66893299	67265729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_66893423_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ENSMUST00000161732.8	chr15	+	2026	15	FSM	ENSMUSG00000022550.19	ENSMUST00000161732.8	2026	15	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	36.3298381892508	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAATCGTTTTCTTTG	3103	False	NA	NA	False	NA	NA	NA	76460558	76480008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477635_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ENSMUST00000161739.8	chr6	-	3893	15	FSM	ENSMUSG00000040669.15	ENSMUST00000161739.8	3893	15	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_10	176.752392241987	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCATTGTCTTACTGCA	9076	False	NA	-19	True	ATTAAA	-34	NA	122316617	122294696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ENSMUST00000161758.3	chr9	+	5539	23	FSM	ENSMUSG00000040325.17	ENSMUST00000161758.3	5539	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	87.5553779894532	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTTTTCTTTTACC	NA	False	NA	16	True	AATAAA	-27	NA	106706267	106758191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742211_106742304_106742796_106742899_106751254_106751508_106757132
ENSMUST00000161783.8	chr15	+	2262	12	FSM	ENSMUSG00000022550.19	ENSMUST00000161783.8	2262	12	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_7	18.5423348534693	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTTTGTGTTTTAT	3123	False	NA	NA	False	AAGAAA	-1	NA	76460578	76480016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478648_76478728_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ENSMUST00000161785.8	chr15	+	3540	3	FSM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGCTCTGTTGGGTT	NA	False	NA	17	True	AGTAAA	-17	NA	75488527	75497149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_75488670_75489892_75491541_75495399
ENSMUST00000161796.9	chr9	-	862	6	FSM	ENSMUSG00000066456.15	ENSMUST00000161796.9	862	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	6.24179461373089	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCCACCTGTTTGTG	NA	False	NA	-6	True	AATAAA	-18	NA	83028658	82992000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_82992483_82993086_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
ENSMUST00000161807.8	chr14	-	962	11	FSM	ENSMUSG00000079197.11	ENSMUST00000161807.8	962	11	0	0	0	0	multi-exon	FALSE	canonical	3	915	junction_9	61.4455856835949	3925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTGTTGTTCATTGA	NA	False	NA	NA	False	AATAAA	-21	NA	55828544	55824897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828298
ENSMUST00000161827.8	chr5	-	2586	10	FSM	ENSMUSG00000029510.16	ENSMUST00000161827.8	2586	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	3.67507453523138	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTCTCTGTGTGTGTA	1721	False	NA	0	True	AATAAA	-20	NA	138278267	138271916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_138272832_138273716_138273887_138273968_138274109_138274190_138274338_138274469_138274601_138274845_138275009_138275668_138275750_138276476_138276800_138277100_138277260_138277910
ENSMUST00000161882.8	chr9	+	489	5	FSM	ENSMUSG00000084786.10	ENSMUST00000161882.8	489	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	473.611127403063	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTTTGCTGCTGTC	NA	False	NA	10	True	AATAAA	-7	NA	20556163	20558065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556917_20556990_20557825
ENSMUST00000161885.8	chr17	-	805	5	FSM	ENSMUSG00000061207.12	ENSMUST00000161885.8	805	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	37.4457941563535	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTTTCTGTGTCCTTTG	5651	False	NA	-5	True	AATAAA	-15	NA	35055843	35042969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35043301_35043489_35043638_35043726_35043825_35055405_35055543_35055752
ENSMUST00000161913.8	chr13	+	1829	16	FSM	ENSMUSG00000021666.17	ENSMUST00000161913.8	1829	16	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	32.7972898609355	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACATCTCACATATACA	NA	False	NA	NA	False	AATAAA	-19	NA	97274492	97304999	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773
ENSMUST00000161918.3	chr3	+	1385	5	FSM	ENSMUSG00000027942.18	ENSMUST00000161918.3	1385	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	210.571098444207	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCATTTCTTTAGAGTG	NA	False	NA	10	True	AATAAA	-20	NA	89960177	89969752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89960427_89960814_89960917_89965791_89965959_89966048_89966108_89968944
ENSMUST00000161920.2	chr13	-	733	3	FSM	ENSMUSG00000035834.12	ENSMUST00000161920.2	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_2	6.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGCTGTGATTACTGC	NA	False	NA	NA	False	NA	NA	NA	81859064	81842401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_81842897_81847862_81848013_81858976
ENSMUST00000161944.2	chr11	-	760	2	FSM	ENSMUSG00000051355.19	ENSMUST00000161944.2	760	2	0	0	0	0	multi-exon	FALSE	canonical	3	2089	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCACTGGTGTTACCAAAA	NA	False	NA	-107	True	NA	NA	NA	22906947	22849834	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_22850058_22906410
ENSMUST00000161976.8	chr15	+	2338	3	FSM	ENSMUSG00000022346.18	ENSMUST00000161976.8	2338	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	2	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAATACAATTGGGCC	NA	False	NA	NA	False	AATAAA	-7	NA	61857239	61862199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_61857801_61859355_61860128_61861194
ENSMUST00000161977.8	chr13	-	3111	15	FSM	ENSMUSG00000021461.18	ENSMUST00000161977.8	3111	15	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_14	18.8014599954148	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAAGTTGCTGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	63579538	63459352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ENSMUST00000161984.8	chr5	-	2583	10	FSM	ENSMUSG00000029510.16	ENSMUST00000161984.8	2583	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8.20267947790745	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGCTCTCTGTGTGTG	1744	False	NA	-2	True	AATAAA	-18	NA	138278244	138271918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_138272832_138273716_138273887_138273968_138274109_138274190_138274338_138274447_138274601_138274845_138275009_138275668_138275750_138276476_138276800_138277100_138277260_138277910
ENSMUST00000162004.8	chr19	-	2847	20	FSM	ENSMUSG00000025188.16	ENSMUST00000162004.8	2847	20	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_19	17.2102848848348	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATTTGTGTGTGTACA	NA	False	NA	88	True	NA	NA	NA	42768417	42743543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ENSMUST00000162023.2	chr10	-	2519	15	FSM	ENSMUSG00000020079.16	ENSMUST00000162023.2	2519	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_10	90.2367916729566	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACTTATTATAGCCTT	NA	False	NA	49	True	AGTAAA	-16	NA	62285462	62265033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279157_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ENSMUST00000162048.8	chr11	+	4014	24	FSM	ENSMUSG00000040463.17	ENSMUST00000162048.8	4014	24	0	0	0	0	multi-exon	FALSE	canonical	3	2360	junction_6	202.660116632124	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAAAAAGAGAAGCTG	NA	False	NA	NA	False	NA	NA	NA	72332182	72342055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ENSMUST00000162057.8	chr16	+	1540	6	FSM	ENSMUSG00000022744.13	ENSMUST00000162057.8	1540	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	183.824916700648	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAGTGAAAA	NA	False	NA	NA	False	NA	NA	NA	58548287	58553971	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_58548448_58549535_58549587_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ENSMUST00000162088.8	chr19	+	2269	3	FSM	ENSMUSG00000006463.14	ENSMUST00000162088.8	2269	3	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	79	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCTTTTTGTTTGTTT	NA	False	NA	22	True	NA	NA	NA	4928695	4935425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4928765_4930148_4930427_4933503
ENSMUST00000162096.8	chr5	-	1489	7	FSM	ENSMUSG00000066861.15	ENSMUST00000162096.8	1489	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	130.842674825745	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121025676	121014784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121017396_121019886_121020133_121023835_121024125_121025442
ENSMUST00000162099.8	chr6	-	2580	15	FSM	ENSMUSG00000003500.14	ENSMUST00000162099.8	2580	15	0	0	0	0	multi-exon	FALSE	canonical	1	42	junction_14	63.7043554080817	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGATCCTGTTTCTG	7	False	NA	-2	True	AATAAA	-18	NA	29216341	29200436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212170_29216070
ENSMUST00000162114.8	chr3	+	1411	7	FSM	ENSMUSG00000027942.18	ENSMUST00000162114.8	1411	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	165.248718267008	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTGTTTGGGCTTTG	NA	False	NA	NA	False	ATTAAA	-43	NA	89960148	89968301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89967668
ENSMUST00000162117.3	chr17	-	1591	7	FSM	ENSMUSG00000037577.14	ENSMUST00000162117.3	1591	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	2.21108319357027	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCGGTCTGATGTTTAA	994	False	NA	NA	False	CATAAA	-26	NA	32408523	32403633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_32404096_32404189_32404327_32404419_32404524_32407149_32407279_32407384_32407543_32407759_32407846_32408008
ENSMUST00000162134.2	chr19	+	2314	3	FSM	ENSMUSG00000006463.14	ENSMUST00000162134.2	2314	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	74.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATGTCTTTTTGTTTGT	NA	False	NA	20	True	NA	NA	NA	4928717	4935423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4928834_4930148_4930427_4933503
ENSMUST00000162160.8	chr15	-	850	8	FSM	ENSMUSG00000022635.10	ENSMUST00000162160.8	850	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	229.028917165408	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGACTGGTTTTAGTCTT	NA	False	NA	2	True	AATAAA	-30	NA	93296182	93283977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_93284165_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
ENSMUST00000162163.8	chr1	+	1614	7	FSM	ENSMUSG00000053332.14	ENSMUST00000162163.8	1614	7	0	0	0	0	multi-exon	FALSE	canonical	3	3085	junction_3	1089.57866474462	2037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862753	160866109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160862765_160863321_160863375_160863552_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUST00000162244.8	chr5	+	1387	8	FSM	ENSMUSG00000029625.17	ENSMUST00000162244.8	1387	8	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_6	148.975001327096	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGGGCGCCAGGCTCCCC	NA	False	NA	NA	False	NA	NA	NA	145104063	145118563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115642_145115739_145117945
ENSMUST00000162245.8	chr5	+	4123	34	FSM	ENSMUSG00000036928.15	ENSMUST00000162245.8	4123	34	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	28.1737362148663	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGACTTGAGATTGTCA	NA	False	NA	20	True	AATAAA	-20	NA	138278805	138310655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_138278847_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ENSMUST00000162246.9	chr9	-	983	6	FSM	ENSMUSG00000066456.15	ENSMUST00000162246.9	983	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	12.1556571192182	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCCACCTGTTTGTG	NA	False	NA	-6	True	AATAAA	-18	NA	83028738	82992000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_82992483_82993045_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
ENSMUST00000162247.8	chr12	-	1883	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162247.8	1883	6	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	71.1983145867934	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTATCTGTCTTTGAG	NA	False	NA	-53	True	AATAAA	-22	NA	87490598	87474846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ENSMUST00000162261.8	chr1	-	633	5	FSM	ENSMUSG00000073481.10	ENSMUST00000162261.8	633	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	388.369910652203	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTGAATGCTACACCC	NA	False	NA	-24	True	AATAAA	-17	NA	184559464	184545888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184559304
ENSMUST00000162301.8	chr18	+	3828	21	FSM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_1	80.8420682565705	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATTGTCAAGAAATGT	-12	True	NA	5	True	ATTAAA	-17	NA	3383231	3436377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ENSMUST00000162303.8	chr9	+	505	5	FSM	ENSMUSG00000084786.10	ENSMUST00000162303.8	505	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	467.366558495577	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGCTGCTGTCATACTT	NA	False	NA	16	True	AATAAA	-13	NA	20556116	20558071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_20556273_20556488_20556556_20556701_20556786_20556917_20556956_20557911
ENSMUST00000162308.8	chr5	+	705	5	FSM	ENSMUSG00000038722.18	ENSMUST00000162308.8	705	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	349.672257263856	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATTCTTTCTTTTAAG	NA	False	NA	16	True	AATAAA	-17	NA	145077206	145084884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145077253_145078114_145078247_145079257_145079378_145083252_145083420_145084644
ENSMUST00000162326.2	chr13	-	1853	17	FSM	ENSMUSG00000039233.13	ENSMUST00000162326.2	1853	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	33.754571449657	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTTCTCTGCCCTTT	NA	False	NA	-6	True	AATAAA	-13	NA	14214223	14172537	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178117_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
ENSMUST00000162360.8	chr5	-	607	5	FSM	ENSMUSG00000038690.16	ENSMUST00000162360.8	607	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	2943.81371480941	26863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTGCCTGGTGTAGT	9969	False	NA	-10	True	AATAAA	-17	NA	145128402	145120515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_145120678_145121341_145121459_145123935_145124044_145125002_145125133_145128312
ENSMUST00000162361.2	chr3	-	472	3	FSM	ENSMUSG00000027860.16	ENSMUST00000162361.2	472	3	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_2	87.5	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGCATGGAGAGTATCC	NA	False	NA	NA	False	NA	NA	NA	102073256	102070678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_102070850_102072670_102072804_102073088
ENSMUST00000162364.8	chr1	+	2840	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	1749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGTATTCTTGCTTT	NA	False	NA	13	True	CATAAA	-13	NA	55170389	55194058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ENSMUST00000162394.2	chr7	-	716	3	FSM	ENSMUSG00000005610.18	ENSMUST00000162394.2	716	3	0	0	0	0	multi-exon	FALSE	canonical	3	5111	junction_2	225	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTTTAGGGTTTTATGG	NA	False	NA	NA	False	AGTAAA	-37	NA	110682034	110679625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_110680172_110680713_110680841_110681991
ENSMUST00000162409.8	chr3	-	5198	14	FSM	ENSMUSG00000039735.17	ENSMUST00000162409.8	5198	14	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	9.36820759854666	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAAGATGTGTACTTATC	NA	False	NA	-5	True	AATAAA	-18	NA	122413364	122332373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
ENSMUST00000162413.9	chr16	-	1687	10	FSM	ENSMUSG00000022858.17	ENSMUST00000162413.9	1687	10	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_8	660.884723143114	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCTTTCTAAATATC	NA	False	NA	-20	True	AATAAA	-14	NA	22084676	22065211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
ENSMUST00000162461.7	chr6	+	1693	12	FSM	ENSMUSG00000030166.15	ENSMUST00000162461.7	1693	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	13.1028985500622	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTTTGGCTTCAGGT	NA	False	NA	3	True	ATTAAA	-16	NA	119879663	119899784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_119879797_119888008_119888103_119889962_119890065_119890859_119890954_119891130_119891199_119892194_119892314_119892927_119893004_119895547_119895748_119895886_119896039_119897070_119897152_119897767_119897990_119899432
ENSMUST00000162466.8	chr8	-	1735	19	FSM	ENSMUSG00000031878.19	ENSMUST00000162466.8	1735	19	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_15	163.229558869982	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTGTTGTCTGGAA	3334	False	NA	NA	False	AATAAA	-19	NA	105261268	105237659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ENSMUST00000162503.8	chr15	+	2040	15	FSM	ENSMUSG00000022550.19	ENSMUST00000162503.8	2040	15	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_10	17.9268638913668	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTTTGTGTTTTAT	3102	False	NA	NA	False	AAGAAA	-1	NA	76460557	76480016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ENSMUST00000162506.2	chr5	+	588	3	FSM	ENSMUSG00000029592.12	ENSMUST00000162506.2	588	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACGATGATGATGAGTGT	NA	False	NA	NA	False	NA	NA	NA	114203521	114227527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_114203830_114224730_114224981_114227497
ENSMUST00000162512.8	chr16	-	3415	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	44566726	44557130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ENSMUST00000162549.2	chr19	-	1164	3	FSM	ENSMUSG00000024799.17	ENSMUST00000162549.2	1164	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	128.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATCTTGAGAGAGAGA	9936	False	NA	-27	True	AATAGA	-18	NA	6117897	6116175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6117053_6117152_6117350_6117807
ENSMUST00000162558.8	chr1	+	502	12	FSM	ENSMUSG00000053332.14	ENSMUST00000162558.8	502	12	0	0	0	0	multi-exon	FALSE	canonical	3	1206	junction_7	1656.43137771865	31219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862732	160866107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUST00000162594.8	chr5	+	867	6	FSM	ENSMUSG00000038722.18	ENSMUST00000162594.8	867	6	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_1	67.372397908936	4312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTCTTTTAAGAGTG	NA	False	NA	20	True	AATAAA	-21	NA	145077171	145084888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145077253_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ENSMUST00000162711.2	chr12	+	914	6	FSM	ENSMUSG00000021024.15	ENSMUST00000162711.2	914	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1071.30021935963	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTTGGAAATGGCGGT	NA	False	NA	3	True	AATAAA	-4	NA	55445579	55465226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_55445777_55454786_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55465021
ENSMUST00000162748.2	chr12	-	896	6	FSM	ENSMUSG00000021266.17	ENSMUST00000162748.2	896	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	744.511813203793	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGTGAACGTTTAGCTG	NA	False	NA	NA	False	NA	NA	NA	108860027	108841039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854237_108854475_108859994
ENSMUST00000162786.2	chr6	-	565	3	FSM	ENSMUSG00000033769.17	ENSMUST00000162786.2	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	24	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAATCATTGAGTAGT	NA	False	NA	NA	False	AATAAA	-31	NA	85046457	84981799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_84982019_84988299_84988466_85046277
ENSMUST00000162787.9	chr4	-	2408	23	FSM	ENSMUSG00000028559.18	ENSMUST00000162787.9	2408	23	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_17	111.643220473462	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGTTACAATTTTGACT	NA	False	NA	2	True	ATTAAA	-29	NA	109059469	108919275	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ENSMUST00000162789.9	chr12	-	1059	5	FSM	ENSMUSG00000021124.14	ENSMUST00000162789.9	1059	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	311.173183291877	1316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGTTTTACAGTTGTGAG	NA	False	NA	84	True	AATACA	-36	NA	79219222	79202943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79218993
ENSMUST00000162811.2	chr11	-	2788	3	FSM	ENSMUSG00000044066.15	ENSMUST00000162811.2	2788	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	11	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTAGCTCAGTTGAC	3044	False	NA	-9	True	AATAAA	-16	NA	20199429	20188386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_20190699_20191885_20192239_20199306
ENSMUST00000162825.8	chr14	-	4100	24	FSM	ENSMUSG00000033487.15	ENSMUST00000162825.8	4100	24	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_23	34.1903931941048	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACACACACACTTACACA	7145	False	NA	NA	False	AAAAAG	-33	NA	72840402	72776969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72840361
ENSMUST00000162827.8	chr9	+	3472	6	FSM	ENSMUSG00000032425.16	ENSMUST00000162827.8	3472	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	5.88557558782486	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGTTTGAGTAGTGTT	NA	False	NA	NA	False	NA	NA	NA	88430072	88453114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_88430562_88434768_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
ENSMUST00000162834.3	chr15	-	1982	9	FSM	ENSMUSG00000018042.19	ENSMUST00000162834.3	1982	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	535.950499113491	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCAGCGTTTCTCTGGG	NA	False	NA	0	True	AGTAAA	-18	NA	83054378	83037694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83054337
ENSMUST00000162851.8	chr12	+	562	7	FSM	ENSMUSG00000060073.10	ENSMUST00000162851.8	562	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	1480.68865359632	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTTGGGTAATTGAAGC	4788	False	NA	4	True	ATTAAA	-15	NA	71021462	71041278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_71021542_71025506_71025590_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUST00000162890.2	chr5	+	600	3	FSM	ENSMUSG00000089889.3	ENSMUST00000162890.2	600	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCGAAGGCCTTTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	143315081	143318456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_143315109_143316458_143316641_143318065
ENSMUST00000162961.8	chr12	-	3857	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	59.8431282604778	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490609	87472938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ENSMUST00000163085.8	chr10	-	1132	7	FSM	ENSMUSG00000019795.18	ENSMUST00000163085.8	1132	7	0	0	0	0	multi-exon	FALSE	canonical	3	667	junction_3	37.7491721763537	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCATTCTTGCTTTATT	NA	False	NA	1	True	AATAAA	-21	NA	7539025	7513493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUST00000163100.8	chr14	-	3841	15	FSM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTCCAGATTGTTCAAA	NA	False	NA	-34	True	ATTAAA	-16	NA	67953059	67913803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ENSMUST00000163140.2	chr8	-	807	4	FSM	ENSMUSG00000031879.15	ENSMUST00000163140.2	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	52.8288641642889	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCCTTAGCGTCTCTCA	NA	False	NA	-3	True	AATAAA	-25	NA	105368331	105366472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_105366719_105367151_105367198_105367599_105367726_105367942
ENSMUST00000163153.9	chr9	+	4131	14	FSM	ENSMUSG00000032050.19	ENSMUST00000163153.9	4131	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	252.321974267452	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTCCGCTGTTGTTATT	NA	False	NA	21	True	AATAAA	-21	NA	51958472	52000035	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_51958536_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ENSMUST00000163168.9	chr6	+	2401	3	FSM	ENSMUSG00000042079.14	ENSMUST00000163168.9	2401	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	255	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGCACAGCTTATGTA	3788	False	NA	NA	False	AATAAA	-14	NA	117883809	117902580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_117884170_117894430_117894560_117900668
ENSMUST00000163230.8	chr16	-	2347	6	FSM	ENSMUSG00000022661.15	ENSMUST00000163230.8	2347	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	7.98498591107085	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGAATTTTTTTTTTTC	NA	False	NA	NA	False	AATAAA	-7	NA	45229416	45202497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_45203821_45212607_45212752_45214955_45215229_45217331_45217659_45220584_45220667_45229218
ENSMUST00000163231.8	chr12	-	5262	19	FSM	ENSMUSG00000042350.14	ENSMUST00000163231.8	5262	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	31.0521763218134	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTAAATGAGTGTTTGAG	NA	False	NA	NA	False	AATAAA	-18	NA	85017598	84964921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
ENSMUST00000163233.2	chrX	-	1256	3	FSM	ENSMUSG00000041353.13	ENSMUST00000163233.2	1256	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	123	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATATCTGACTTGAGA	NA	False	NA	NA	False	GATAAA	-15	NA	149223901	149191579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_149192597_149203337_149203438_149223762
ENSMUST00000163242.3	chr15	+	1937	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	0	0	0	0	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	4846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGACCCTTGATTGGA	NA	False	NA	25	True	AATAAA	-33	NA	85220445	85347413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ENSMUST00000163311.9	chr7	-	1288	6	FSM	ENSMUSG00000061479.16	ENSMUST00000163311.9	1288	6	0	0	0	0	multi-exon	FALSE	canonical	3	2141	junction_5	100.882902416614	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-26	NA	26895185	26886431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868
ENSMUST00000163324.8	chr14	+	3132	4	FSM	ENSMUSG00000037536.15	ENSMUST00000163324.8	3132	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	28.4526897771644	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTCTTAAAATAAGAT	NA	False	NA	14	True	AATAAA	-22	NA	47710017	47769419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_47710175_47738250_47738328_47763661_47763772_47766631
ENSMUST00000163329.2	chr9	+	1364	11	FSM	ENSMUSG00000055720.11	ENSMUST00000163329.2	1364	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	59.3140792729686	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818268	57837251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_57818343_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ENSMUST00000163338.2	chrX	+	2025	7	FSM	ENSMUSG00000079387.11	ENSMUST00000163338.2	2025	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	4.85626742811116	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	147665571	147707135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_147665664_147686432_147686559_147687278_147687359_147690981_147691941_147698819_147698902_147699707_147699758_147706499
ENSMUST00000163352.9	chr16	+	391	4	FSM	ENSMUSG00000075229.12	ENSMUST00000163352.9	391	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	405.618320866085	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTGAGCCAGCAGGC	NA	False	NA	NA	False	NA	NA	NA	35892449	35912329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_35892508_35905386_35905534_35910270_35910331_35912203
ENSMUST00000163377.10	chr10	+	1158	3	FSM	ENSMUSG00000064030.16	ENSMUST00000163377.10	1158	3	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	26	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTCAGGCTTTGGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	128583757	128602432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128583868_128601015_128601110_128601478
ENSMUST00000163389.9	chr7	+	1749	13	FSM	ENSMUSG00000030890.17	ENSMUST00000163389.9	1749	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	93.7171794401764	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTCGTGTGGGGACAGA	NA	False	NA	25	True	AATAAA	-15	NA	105385931	105392129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_105386014_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUST00000163392.3	chr14	-	2452	5	FSM	ENSMUSG00000033111.17	ENSMUST00000163392.3	2452	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	38.2295697072306	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAGGTGTTTAAAGG	NA	False	NA	NA	False	AATAAA	-19	NA	10185590	10166531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185505
ENSMUST00000163398.8	chr19	-	3378	30	FSM	ENSMUSG00000025159.9	ENSMUST00000163398.8	3378	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	66.8449143044629	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGGCACACTCACGTG	NA	False	NA	-14	True	AATAAA	-10	NA	41969556	41932649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951898_41952301_41952377_41952756_41952843_41954652_41954754_41969437
ENSMUST00000163399.8	chrX	+	1991	7	FSM	ENSMUSG00000046774.18	ENSMUST00000163399.8	1991	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_5	79.7050116924205	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCTGTACTTTTGCAA	NA	False	NA	NA	False	NA	NA	NA	100838261	100842244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841763_100841947_100841990_100842072
ENSMUST00000163446.9	chr18	-	4064	23	FSM	ENSMUSG00000024613.17	ENSMUST00000163446.9	4064	23	0	0	0	0	multi-exon	FALSE	canonical	2	104	junction_4	297.096601286295	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTGCTTTCCAGTACGC	NA	False	NA	4	True	AAAAAG	-21	NA	60982031	60949068	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954704_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ENSMUST00000163482.8	chr7	+	668	8	FSM	ENSMUSG00000078765.12	ENSMUST00000163482.8	668	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	252.85778853832	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGGTTTCCTTCCAC	NA	False	NA	35	True	AATAAA	-23	NA	30262772	30264789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30262834_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30263926_30264217_30264224_30264519
ENSMUST00000163483.2	chr11	+	2657	6	FSM	ENSMUSG00000020149.18	ENSMUST00000163483.2	2657	6	0	0	0	0	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	2181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCGCTTGTTGGGTCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	20151601	20176856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ENSMUST00000163492.8	chr17	-	2216	12	FSM	ENSMUSG00000023942.16	ENSMUST00000163492.8	2216	12	0	0	0	0	multi-exon	FALSE	canonical	3	1453	junction_5	300.974423009307	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	-1	True	AATAAA	-18	NA	45903501	45896125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104
ENSMUST00000163506.3	chr15	-	1771	14	FSM	ENSMUSG00000037570.17	ENSMUST00000163506.3	1771	14	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_13	210.299476515005	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAGTAGCTTCTTTTAT	NA	False	NA	-8	True	AATAAA	-12	NA	99149826	99140706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99149742
ENSMUST00000163528.8	chr1	-	3413	14	FSM	ENSMUSG00000046836.14	ENSMUST00000163528.8	3413	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_13	29.2690033348083	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTCGCTGGATTTATGT	NA	False	NA	NA	False	AATAAA	-15	NA	183078800	183057917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078725
ENSMUST00000163530.8	chr3	-	2157	16	FSM	ENSMUSG00000028107.15	ENSMUST00000163530.8	2157	16	0	0	0	0	multi-exon	FALSE	canonical	1	51	junction_13	151.691997884602	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662183	95647287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95660318_95660443_95661630_95661828_95662069
ENSMUST00000163558.3	chr13	-	678	4	FSM	ENSMUSG00000068184.8	ENSMUST00000163558.3	678	4	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_2	39.4151691047439	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCGTATTTCCTGACT	NA	False	NA	-1	True	AATAAA	-15	NA	108295157	108189122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_108189489_108217886_108217928_108228067_108228158_108294976
ENSMUST00000163600.8	chr13	+	1055	9	FSM	ENSMUSG00000021548.11	ENSMUST00000163600.8	1055	9	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	292.63455772516	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTGATTGTTTTA	NA	False	NA	15	True	ATTAAA	-22	NA	85337595	85361029	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350559_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ENSMUST00000163602.9	chr10	-	1609	6	FSM	ENSMUSG00000052151.13	ENSMUST00000163602.9	1609	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	21.5462293684997	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCATGTTGATTTTTCAA	NA	False	NA	0	True	TATAAA	-22	NA	79369626	79362263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79369498
ENSMUST00000163643.3	chr8	-	3129	24	FSM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	82.9540606689901	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175304	73094842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ENSMUST00000163654.8	chr7	+	781	7	FSM	ENSMUSG00000078765.12	ENSMUST00000163654.8	781	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	203.636454387606	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262749	30264787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264519
ENSMUST00000163666.3	chr11	-	1774	11	FSM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	0	0	0	0	multi-exon	FALSE	canonical	3	9657	junction_10	1402.57834362292	24334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGCTTCTTGTTTCTT	NA	False	NA	64	True	AATAAA	-19	NA	69563143	69557761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ENSMUST00000163668.3	chr2	-	1733	11	FSM	ENSMUSG00000026860.17	ENSMUST00000163668.3	1733	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	145.180714972754	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249301	30234822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_30235440_30235710_30235952_30236070_30236086_30236364_30236466_30236622_30236713_30237092_30237117_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUST00000163710.8	chr7	-	885	13	FSM	ENSMUSG00000064179.14	ENSMUST00000163710.8	885	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	20.3570558338435	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTTCTTCAGGGTTGTT	9197	False	NA	-11	True	AATAAA	-19	NA	4518958	4507661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513380_4515263_4515283_4516809_4516837_4517211_4517226_4517335_4517379_4518929
ENSMUST00000163717.2	chr17	+	1920	9	FSM	ENSMUSG00000034681.18	ENSMUST00000163717.2	1920	9	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	446.592917963328	3895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	913	False	NA	NA	False	AATAAA	-18	NA	24633648	24644869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24633709_24634014_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUST00000163750.8	chr14	-	514	5	FSM	ENSMUSG00000010376.16	ENSMUST00000163750.8	514	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	800.314742773117	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGACTCTTTCTTCTT	NA	False	NA	-13	True	AATAAA	-13	NA	55909330	55899721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55899858_55899914_55900083_55900871_55900955_55901268_55901317_55909251
ENSMUST00000163779.8	chr6	-	1188	6	FSM	ENSMUSG00000025889.14	ENSMUST00000163779.8	1188	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	6.34350061086148	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGGTTCCTTTTAC	6723	False	NA	-2	True	AATAAA	-24	NA	60806839	60708558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_60709146_60710087_60710172_60792600_60792744_60795307_60795350_60804464_60804612_60806654
ENSMUST00000163812.9	chr7	+	3026	14	FSM	ENSMUSG00000038943.17	ENSMUST00000163812.9	3026	14	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_13	239.092317096712	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	18	True	AATAAA	-28	NA	79944197	79966007	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79964861
ENSMUST00000163837.2	chr8	-	1272	13	FSM	ENSMUSG00000031708.18	ENSMUST00000163837.2	1272	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	1132.45025644985	9315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321058	84298328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300337_84300552_84301106_84301158_84320968
ENSMUST00000163869.2	chr8	+	1467	7	FSM	ENSMUSG00000091490.4	ENSMUST00000163869.2	1467	7	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_2	46.4351399504968	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43636155	43646918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ENSMUST00000163884.8	chr16	+	1645	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	0	0	0	0	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGATCTATTTTTTCTTGCG	7070	False	NA	0	True	GATAAA	-12	NA	38379059	38411552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUST00000163889.3	chr14	-	1886	17	FSM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_16	115.082697847027	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGCCAAGCTACCATTA	NA	False	NA	-19	True	AATAAA	-19	NA	55959720	55953781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
ENSMUST00000163946.2	chr4	-	762	3	FSM	ENSMUSG00000078570.11	ENSMUST00000163946.2	762	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	68	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGACCTTTCTTTTCTG	7655	False	NA	-2	True	ATTAAA	-21	NA	124744523	124743277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_124743756_124744024_124744227_124744441
ENSMUST00000163949.9	chr6	+	2561	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTCCGGCTTCCCCTCC	-3	True	NA	13	True	AATAAA	-19	NA	30738048	30748461	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ENSMUST00000163966.8	chr17	-	703	6	FSM	ENSMUSG00000023944.15	ENSMUST00000163966.8	703	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4038.94278246177	2027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGGGCTTGGCAGTGTT	NA	False	NA	-171	True	AAGAAA	-40	NA	45884181	45881588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45881726_45881943_45882104_45882338_45882408_45882444_45882546_45882690_45882838_45884092
ENSMUST00000164044.8	chr1	-	1347	5	FSM	ENSMUSG00000059498.14	ENSMUST00000164044.8	1347	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	72.4581775923187	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATCTCCTTTTGGTGA	NA	False	NA	-8	True	AATAAA	-23	NA	170886972	170878743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_170879422_170881507_170881763_170885259_170885518_170886154_170886176_170886837
ENSMUST00000164079.9	chr9	+	1005	6	FSM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	106.167791726116	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTGCTTGATTTCAGA	9122	False	NA	NA	False	AATAAA	-17	NA	15217559	15223094	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
ENSMUST00000164083.4	chr10	+	1473	11	FSM	ENSMUSG00000044475.15	ENSMUST00000164083.4	1473	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	64.3808201252516	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTGGTCTGTGCACG	NA	False	NA	28	True	AATAAA	-18	NA	59839148	59935810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59839239_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
ENSMUST00000164088.8	chr10	-	2618	14	FSM	ENSMUSG00000020166.16	ENSMUST00000164088.8	2618	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	135.006640204874	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116385068	116321069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937
ENSMUST00000164096.2	chr1	-	669	4	FSM	ENSMUSG00000090553.9	ENSMUST00000164096.2	669	4	0	0	0	0	multi-exon	FALSE	canonical	3	3763	junction_2	133.057214093119	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCAACTCTGGCTGTT	NA	False	NA	NA	False	NA	NA	NA	133537987	133533824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_133534318_133536634_133536698_133537455_133537483_133537901
ENSMUST00000164120.8	chr2	+	4365	18	FSM	ENSMUSG00000027469.17	ENSMUST00000164120.8	4365	18	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	220.211647171926	1456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	2694	False	NA	13	True	NA	NA	NA	152689883	152737241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_152690218_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUST00000164122.2	chr3	+	472	2	FSM	ENSMUSG00000001416.14	ENSMUST00000164122.2	472	2	0	0	0	0	multi-exon	FALSE	canonical	3	2565	junction_1	0	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACCGTTGTCATGTGTT	865	False	NA	20	True	ATTAAA	-12	NA	88228301	88229071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88228453_88228750
ENSMUST00000164166.8	chr3	+	1804	12	FSM	ENSMUSG00000001416.14	ENSMUST00000164166.8	1804	12	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_2	744.224284153619	9441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTGTCATGTGTTTT	3862	False	NA	22	True	ATTAAA	-14	NA	88204480	88229073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88204574_88206648_88206711_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ENSMUST00000164181.2	chr10	-	665	6	FSM	ENSMUSG00000090841.3	ENSMUST00000164181.2	665	6	0	0	0	0	multi-exon	FALSE	canonical	3	2189	junction_3	223.361948415571	13409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTCTTTCTTTCTTTC	8224	False	NA	-4	True	AATAAA	-21	NA	128329744	128326728	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ENSMUST00000164199.8	chr10	-	1371	6	FSM	ENSMUSG00000025374.14	ENSMUST00000164199.8	1371	6	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	33.0732520324204	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	False	NA	-7	True	AATAAA	-13	NA	128245597	128237263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115
ENSMUST00000164223.8	chr18	+	976	9	FSM	ENSMUSG00000079608.11	ENSMUST00000164223.8	976	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.87082869338697	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACAGCCTACTAGTAAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	70605698	70633707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_70605724_70606272_70606426_70607355_70607437_70609170_70609265_70609452_70609503_70616482_70616610_70629184_70629303_70631618_70631713_70633473
ENSMUST00000164235.3	chr14	+	4531	3	FSM	ENSMUSG00000021840.18	ENSMUST00000164235.3	4531	3	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	13.5	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTGTTTGCATGTGAC	NA	False	NA	11	True	AATAAA	-16	NA	47546006	47560661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_47546046_47547871_47548571_47556868
ENSMUST00000164243.2	chr12	+	2317	15	FSM	ENSMUSG00000079108.7	ENSMUST00000164243.2	2317	15	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_10	278.282643353546	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGGTTGGTTCATTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	55286110	55309805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
ENSMUST00000164259.9	chr10	-	2627	15	FSM	ENSMUSG00000040462.14	ENSMUST00000164259.9	2627	15	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	48.7011398265807	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCAGGCTCTGTGGG	NA	False	NA	-4	True	AATAAA	-14	NA	126957000	126931520	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_126932242_126932498_126932612_126932783_126932949_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ENSMUST00000164296.8	chr2	-	2791	12	FSM	ENSMUSG00000026918.17	ENSMUST00000164296.8	2791	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	79.8942482854111	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	27354128	27337854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_27338382_27338411_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900
ENSMUST00000164309.3	chr8	+	3381	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	0	0	0	0	multi-exon	FALSE	canonical	3	795	junction_1	234.54782794507	4552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTGGCTGAAGTGTTTG	NA	False	NA	1	True	NA	NA	NA	75836196	75855067	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ENSMUST00000164342.10	chr17	-	2559	11	FSM	ENSMUSG00000012296.17	ENSMUST00000164342.10	2559	11	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_7	88.074059745194	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5819	False	NA	-30	True	AATAAA	-18	NA	46593939	46568799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ENSMUST00000164359.8	chr11	-	1281	7	FSM	ENSMUSG00000078812.11	ENSMUST00000164359.8	1281	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	9789.73126404511	4523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGTTGTTTATTTGTT	6572	False	NA	-9	True	AATAAA	-26	NA	69811911	69807539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166_69811261_69811849
ENSMUST00000164397.8	chr16	+	4872	6	FSM	ENSMUSG00000022686.15	ENSMUST00000164397.8	4872	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	26.2343286554087	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCTGCGTTACTTGGG	NA	False	NA	NA	False	AATAAA	-13	NA	19578983	19591503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_19579228_19579390_19579578_19582900_19583104_19583857_19583965_19584250_19584372_19587493
ENSMUST00000164399.8	chr2	+	983	3	FSM	ENSMUSG00000035268.15	ENSMUST00000164399.8	983	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	157.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGATCTTTTCTTTTAAC	8590	False	NA	14	True	AATAAA	-24	NA	163500305	163568078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_163500413_163563047_163563222_163567376
ENSMUST00000164458.10	chr16	-	2190	21	FSM	ENSMUSG00000022771.18	ENSMUST00000164458.10	2190	21	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	166.780814244325	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCGTTCATGACCTGGT	NA	False	NA	NA	False	AATAAA	-18	NA	16929077	16904419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16904980_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ENSMUST00000164470.3	chr8	-	2189	16	FSM	ENSMUSG00000031948.15	ENSMUST00000164470.3	2189	16	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_15	556.875793053432	4011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737898	112720074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112735113_112735172_112737841
ENSMUST00000164472.8	chr6	+	1098	3	FSM	ENSMUSG00000059689.16	ENSMUST00000164472.8	1098	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	15	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGTATTTTTCATAATT	NA	False	NA	10	True	AATAAA	-17	NA	117818202	117822916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_117818230_117820213_117820354_117821985
ENSMUST00000164504.2	chr8	+	4521	4	FSM	ENSMUSG00000031631.16	ENSMUST00000164504.2	4521	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	3.55902608401044	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTGATTCTGTTTTGT	5156	False	NA	16	True	AATAAA	-17	NA	46622592	46648625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_46623690_46634754_46635024_46644616_46644768_46645621
ENSMUST00000164506.3	chr11	-	2316	5	FSM	ENSMUSG00000020925.17	ENSMUST00000164506.3	2316	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	239.593405585379	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTCTTCTGTCTTGTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	102588560	102575513	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102577323_102579626_102579688_102581028_102581163_102582936_102583025_102588336
ENSMUST00000164532.3	chr15	-	1770	12	FSM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_11	247.062410558028	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	8739	False	NA	-4	True	AATAAA	-22	NA	63869818	63802790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63869746
ENSMUST00000164542.8	chr15	-	730	6	FSM	ENSMUSG00000022370.14	ENSMUST00000164542.8	730	6	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	366.126754007407	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	0	True	AATAAA	-20	NA	55420745	55397489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55418715_55418840_55420653
ENSMUST00000164543.2	chr19	-	341	2	FSM	ENSMUSG00000025204.11	ENSMUST00000164543.2	341	2	0	0	0	0	multi-exon	FALSE	canonical	3	4404	junction_1	0	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGCTCTGGTTTCTGT	4534	False	NA	-22	True	AATAAA	-14	NA	44541319	44538693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44538852_44541136
ENSMUST00000164553.8	chr7	+	2798	2	FSM	ENSMUSG00000068566.14	ENSMUST00000164553.8	2798	2	0	0	0	0	multi-exon	FALSE	canonical	3	952	junction_1	0	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAACCCTCAATATA	2790	False	NA	-13	True	TTTAAA	-10	NA	3341618	3347838	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3341816_3345237
ENSMUST00000164580.3	chr7	+	3001	14	FSM	ENSMUSG00000062031.14	ENSMUST00000164580.3	3001	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	17.6205904299655	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCAGAGTGTGTGATG	NA	False	NA	7	True	ATTAAA	-19	NA	140521460	140527569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526706
ENSMUST00000164609.8	chrX	-	1811	4	FSM	ENSMUSG00000031422.17	ENSMUST00000164609.8	1811	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	1452.09664508485	4187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135643667	135633701	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135643572
ENSMUST00000164655.2	chr14	-	2843	8	FSM	ENSMUSG00000060373.16	ENSMUST00000164655.2	2843	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	1536.09765314579	4227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATAGTTGGTATATACA	8725	False	NA	-34	True	AATAAA	-19	NA	52341485	52310836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321874_52341345
ENSMUST00000164659.8	chr10	+	2602	12	FSM	ENSMUSG00000019970.16	ENSMUST00000164659.8	2602	12	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	208.20654874943	2083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTGTGTCATGTGTTA	NA	False	NA	13	True	AATAAA	-19	NA	21854570	21875797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_21854882_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ENSMUST00000164688.2	chr15	+	1020	3	FSM	ENSMUSG00000023048.14	ENSMUST00000164688.2	1020	3	0	0	0	0	multi-exon	FALSE	canonical	3	623	junction_2	60	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTCTACTCACCTGTGCC	3286	False	NA	10	True	AATAAA	-13	NA	102368517	102371211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102368582_102368804_102369155_102370605
ENSMUST00000164744.8	chr6	-	2465	17	FSM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_16	154.413292315623	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATTGCAATTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	97182521	97160630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182493
ENSMUST00000164776.8	chr19	-	3412	30	FSM	ENSMUSG00000025159.9	ENSMUST00000164776.8	3412	30	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_29	55.4890911711589	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGGCACACTCACGTG	NA	False	NA	-14	True	AATAAA	-10	NA	41969575	41932649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41969437
ENSMUST00000164791.8	chr11	+	1252	9	FSM	ENSMUSG00000020407.14	ENSMUST00000164791.8	1252	9	0	0	0	0	multi-exon	FALSE	canonical	3	2502	junction_1	159.654656602932	10961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTGTGACTCTGCGGT	NA	False	NA	23	True	AATAAA	-17	NA	9068506	9086167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ENSMUST00000164800.8	chrX	+	3557	19	FSM	ENSMUSG00000031351.16	ENSMUST00000164800.8	3557	19	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_12	13.3427050397503	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTGTGTATGTGTGCAC	NA	False	NA	45	True	AATAAA	-45	NA	72030944	72075149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ENSMUST00000164807.2	chr8	+	1175	5	FSM	ENSMUSG00000005161.16	ENSMUST00000164807.2	1175	5	0	0	0	0	multi-exon	FALSE	canonical	3	3496	junction_2	252.757171015977	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATAGGGGT	NA	False	NA	NA	False	NA	NA	NA	85696867	85701289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUST00000164837.3	chr17	+	2523	2	FSM	ENSMUSG00000050088.10	ENSMUST00000164837.3	2523	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACTGGTGCTGTTACTT	NA	False	NA	7	True	AATAAA	-15	NA	15163491	15166196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_15163582_15163763
ENSMUST00000164868.8	chr14	+	1864	8	FSM	ENSMUSG00000021906.15	ENSMUST00000164868.8	1864	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	99.0186541897587	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATGTTTAATGTTTCAG	NA	False	NA	20	True	AATACA	-19	NA	31807767	31825159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821490_31821589_31822911_31823052_31824213
ENSMUST00000164907.3	chr17	-	1965	2	FSM	ENSMUSG00000054723.7	ENSMUST00000164907.3	1965	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACTCTACCTTTTTTC	6865	False	NA	-6	True	AATAAA	-16	NA	57024680	57020935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_57022818_57024597
ENSMUST00000164916.9	chr16	+	1073	5	FSM	ENSMUSG00000075229.12	ENSMUST00000164916.9	1073	5	0	0	0	0	multi-exon	FALSE	canonical	3	859	junction_1	27.9284800875379	5874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGGTGACTTT	NA	False	NA	25	True	ATTAAA	-22	NA	35892054	35912490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_35892508_35903060_35903187_35905386_35905534_35910270_35910331_35912203
ENSMUST00000164924.8	chr7	+	1957	10	FSM	ENSMUSG00000025509.16	ENSMUST00000164924.8	1957	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.2714239899796	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCATGTTACCCTTGC	9976	False	NA	28	True	AATAAA	-29	NA	141035141	141040016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_141035387_141036480_141036563_141037185_141037419_141037504_141037571_141037996_141038128_141038342_141038404_141038504_141038673_141038757_141038891_141039079_141039203_141039301
ENSMUST00000164957.8	chr15	+	1055	4	FSM	ENSMUSG00000023048.14	ENSMUST00000164957.8	1055	4	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	130.244215056008	1732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCACCTGTGCCATTACC	2405	False	NA	16	True	AATAAA	-19	NA	102367636	102371217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102367691_102368542_102368582_102368804_102369155_102370605
ENSMUST00000164972.8	chr15	+	2237	12	FSM	ENSMUSG00000022561.14	ENSMUST00000164972.8	2237	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	83.2816589096531	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGGATCCTGGCCCG	4826	False	NA	15	True	AATAAA	-18	NA	76215543	76219098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76215664_76215843_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUST00000164980.8	chr5	-	3136	9	FSM	ENSMUSG00000004530.13	ENSMUST00000164980.8	3136	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	320.074112511462	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	114046766	113980496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ENSMUST00000165007.9	chr17	-	1954	11	FSM	ENSMUSG00000063576.13	ENSMUST00000165007.9	1954	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	118.520082686438	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTCCTATTTCTGGC	NA	False	NA	-3	True	TATAAA	-14	NA	46991840	46985478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46991627
ENSMUST00000165015.9	chr14	+	1619	3	FSM	ENSMUSG00000035235.14	ENSMUST00000165015.9	1619	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	100	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGAGTTTGTGCTGTG	NA	False	NA	18	True	AATAAA	-16	NA	61835695	61843395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_61835796_61837242_61837345_61841978
ENSMUST00000165017.2	chr19	+	3634	13	FSM	ENSMUSG00000015176.12	ENSMUST00000165017.2	3634	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	313.587042674491	2907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTTCAGAGTTATGTC	137	False	NA	11	True	AATAAA	-14	NA	46064301	46073967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUST00000165028.8	chr10	-	2676	14	FSM	ENSMUSG00000042570.15	ENSMUST00000165028.8	2676	14	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_13	38.1023225308973	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79391033	79376078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ENSMUST00000165086.8	chr18	-	2778	9	FSM	ENSMUSG00000063889.17	ENSMUST00000165086.8	2778	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	23.777286956253	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGTGTGTATGTCT	-20	True	NA	-2	True	TATAAA	-17	NA	3337589	3266355	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_3268130_3273421_3273579_3276693_3276730_3295039_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3327493_3327592_3337379
ENSMUST00000165095.9	chr15	-	3186	11	FSM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	172.10531659423	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGCATCCACCCTCAT	NA	False	NA	4	True	AATAAA	-31	NA	83317016	83260318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316864
ENSMUST00000165096.9	chr7	-	2837	15	FSM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_9	19.4401226165613	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTTTCCCTCTTAT	NA	False	NA	0	True	AATAAA	-21	NA	126613793	126586031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126613690
ENSMUST00000165111.8	chr11	-	4162	27	FSM	ENSMUSG00000020917.18	ENSMUST00000165111.8	4162	27	0	0	0	0	multi-exon	FALSE	canonical	3	2198	junction_15	361.710304905122	2585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTGATGCTCTTTTA	772	False	NA	-19	True	AATAAA	-13	NA	100414424	100367183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265
ENSMUST00000165123.8	chr18	+	4083	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	1994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGAGAGGCTGGTTGTCT	428	False	NA	13	True	AATAAA	-16	NA	61688344	61723132	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ENSMUST00000165126.9	chr8	-	387	3	FSM	ENSMUSG00000090137.9	ENSMUST00000165126.9	387	3	0	0	0	0	multi-exon	FALSE	canonical	3	22365	junction_1	190	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGGTCATACCTGGCA	NA	False	NA	-73	True	NA	NA	NA	70962273	70960981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70961179_70961945_70962033_70962170
ENSMUST00000165127.8	chr17	-	572	5	FSM	ENSMUSG00000023944.15	ENSMUST00000165127.8	572	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4660.44286388107	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAAGGAGTTTGATGGGA	NA	False	NA	-130	True	NA	NA	NA	45884179	45879943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45880053_45880165_45880314_45880395_45880477_45882690_45882838_45884092
ENSMUST00000165140.2	chr16	+	660	2	FSM	ENSMUSG00000002845.15	ENSMUST00000165140.2	660	2	0	0	0	0	multi-exon	FALSE	canonical	1	310	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTATCTTTCATGTGT	4429	False	NA	10	True	ATTAAA	-18	NA	38408400	38411668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_38408666_38411273
ENSMUST00000165143.3	chr19	-	2391	18	FSM	ENSMUSG00000024833.16	ENSMUST00000165143.3	2391	18	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	92.2413338358681	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	1626	False	NA	NA	False	NA	NA	NA	6014230	5991134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5991581_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ENSMUST00000165242.4	chr6	-	2679	7	FSM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	0	0	0	0	multi-exon	TRUE	canonical	3	371	junction_3	47.1643108952333	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGTGATCAAATGACTT	NA	False	NA	-8	True	ATTAAA	-16	NA	88423521	88234315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ENSMUST00000165306.3	chr17	+	1518	3	FSM	ENSMUSG00000092417.4	ENSMUST00000165306.3	1518	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	21.5	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTTTACTTTCTTGAA	4589	False	NA	14	True	AATAAA	-14	NA	35340458	35343790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35340775_35342028_35342636_35343195
ENSMUST00000165307.8	chr3	+	3274	7	FSM	ENSMUSG00000015749.13	ENSMUST00000165307.8	3274	7	0	0	0	0	multi-exon	FALSE	canonical	3	1451	junction_5	106.857641540301	3372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTCAGTGTGTGATTG	NA	False	NA	105	True	AATAAA	-22	NA	95836557	95854702	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUST00000165313.2	chr2	-	1975	5	FSM	ENSMUSG00000036249.17	ENSMUST00000165313.2	1975	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	13.0455931256497	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTGAGCTGCATCATT	NA	False	NA	NA	False	NA	NA	NA	51824656	51814462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_51815947_51816692_51816773_51819671_51819862_51822411_51822536_51824559
ENSMUST00000165316.8	chr13	+	4426	34	FSM	ENSMUSG00000037851.14	ENSMUST00000165316.8	4426	34	0	0	0	0	multi-exon	FALSE	canonical	1	598	junction_17	241.366305222171	1982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAAGTAGTTATTCTC	NA	False	NA	30	True	ATTAAA	-31	NA	49835575	49887743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ENSMUST00000165335.8	chr4	+	3143	12	FSM	ENSMUSG00000029064.16	ENSMUST00000165335.8	3143	12	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_11	1088.68406424249	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575817	155643726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ENSMUST00000165392.8	chr6	-	1643	4	FSM	ENSMUSG00000032641.19	ENSMUST00000165392.8	1643	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	41.0636362518253	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTCCTGTGGATTTTGT	NA	False	NA	-3	True	ACTAAA	-34	NA	134874778	134846055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_134847407_134864592_134864749_134874124_134874177_134874694
ENSMUST00000165405.2	chr10	+	1732	5	FSM	ENSMUSG00000020111.16	ENSMUST00000165405.2	1732	5	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_3	28.4725745235657	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAACAA	NA	False	NA	NA	False	GATAAA	-5	NA	59538479	59587527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325
ENSMUST00000165443.4	chr15	+	4766	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTGGGTACTGTTCTGTT	NA	False	NA	19	True	AATAAA	-19	NA	84807611	84827164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ENSMUST00000165485.8	chr19	+	1557	11	FSM	ENSMUSG00000024909.16	ENSMUST00000165485.8	1557	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	7.8873316146844	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	False	NA	10	True	AATAAA	-15	NA	5524715	5531881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ENSMUST00000165515.8	chr17	+	2078	12	FSM	ENSMUSG00000048440.17	ENSMUST00000165515.8	2078	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	22.7559818672762	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATGTCTTGGTTCCATT	NA	False	NA	21	True	NA	NA	NA	32755550	32770772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_32755630_32755968_32756171_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ENSMUST00000165532.3	chr9	+	1009	6	FSM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	0	0	0	0	multi-exon	FALSE	canonical	3	10044	junction_1	2651.61525112525	130694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACCATAGTCGAGTATAA	NA	False	NA	26	True	AATAAA	-35	NA	120400509	120403720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ENSMUST00000165537.8	chr15	+	2360	8	FSM	ENSMUSG00000009585.19	ENSMUST00000165537.8	2360	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	224.554434107971	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGTCTCAAAAAAAAAAAAA	8251	False	NA	NA	False	NA	NA	NA	79776608	79792630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUST00000165563.8	chr10	+	2442	12	FSM	ENSMUSG00000020111.16	ENSMUST00000165563.8	2442	12	0	0	0	0	multi-exon	FALSE	canonical	2	105	junction_7	32.1836157690049	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTCTGTGTCCTTTCTTT	NA	False	NA	27	True	NA	NA	NA	59538298	59699954	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59697384_59697475_59699000
ENSMUST00000165565.8	chr11	+	2311	11	FSM	ENSMUSG00000017421.19	ENSMUST00000165565.8	2311	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	381.677992553933	2076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTGATACATGATTG	NA	False	NA	127	True	AATAAA	-15	NA	80274104	80287071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ENSMUST00000165576.8	chr6	-	2826	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTAGTAGTTGCAGTGAT	18	False	22356183	0	True	ATTAAA	-22	NA	22356165	22306518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
ENSMUST00000165596.8	chr9	-	3726	21	FSM	ENSMUSG00000032480.18	ENSMUST00000165596.8	3726	21	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_20	126.75089743272	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109944145	109913388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103
ENSMUST00000165630.3	chr8	+	2267	15	FSM	ENSMUSG00000042870.16	ENSMUST00000165630.3	2267	15	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	29.4884965464743	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTCTGGCGGAAGCAA	NA	False	NA	12	True	AATAAA	-25	NA	75760332	75796749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
ENSMUST00000165649.4	chr14	-	3188	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	0	0	0	0	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	13781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTAGTTGGGTAGTGG	NA	False	NA	NA	False	AATAAA	-25	NA	36857209	36842048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ENSMUST00000165721.8	chr18	+	2323	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	0	0	0	0	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGTGAAATTTTTTTA	467	False	NA	27	True	ATTAAA	-20	NA	61688383	61721375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ENSMUST00000165735.9	chr9	-	1376	5	FSM	ENSMUSG00000001348.16	ENSMUST00000165735.9	1376	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	107.395006867172	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	5016	False	NA	-19	True	AATAAA	-21	NA	22047007	22038022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22046908
ENSMUST00000165740.9	chr8	-	1120	12	FSM	ENSMUSG00000031708.18	ENSMUST00000165740.9	1120	12	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_9	1051.54616581631	10448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321113	84298328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300499_84300552_84301106_84301158_84320968
ENSMUST00000165766.9	chr9	+	3063	21	FSM	ENSMUSG00000033335.18	ENSMUST00000165766.9	3063	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	219.759049870534	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	5842	False	NA	15	True	AATAAA	-16	NA	21336203	21419050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21390194_21390334_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ENSMUST00000165784.3	chr2	+	470	1	FSM	ENSMUSG00000091703.3	ENSMUST00000165784.3	470	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	928	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAACTTCTTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	89978762	89979232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_89978800_89979200
ENSMUST00000165790.9	chr16	+	2544	7	FSM	ENSMUSG00000022750.19	ENSMUST00000165790.9	2544	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	179.822520527572	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTGTTACATCTAATG	NA	False	NA	1	True	AATAAA	-10	NA	17577540	17611228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_17577571_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ENSMUST00000165806.8	chr10	+	1775	11	FSM	ENSMUSG00000019794.14	ENSMUST00000165806.8	1775	11	0	0	0	0	multi-exon	TRUE	canonical	3	353	junction_4	21.6323831327018	1551	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTTCAATTTAGCACC	NA	False	NA	10	True	AATAAA	-19	NA	7601763	7638914	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
ENSMUST00000165853.2	chr4	+	3382	6	FSM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1089.03101884198	806	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACAGTTCATGTTTGCTC	NA	False	NA	40	True	AATAAA	-41	NA	129714500	129743796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129714593_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ENSMUST00000165861.8	chr4	+	3361	13	FSM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	26.2752524039045	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCCAGTACCTGTCCT	5069	False	NA	42	True	AATAAA	-40	NA	137944441	137970481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_137944606_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUST00000165876.8	chr9	+	5573	19	FSM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_18	61.7868698345418	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTATGTTGCTTCTGT	NA	False	NA	17	True	AATAAA	-17	NA	109760931	109913015	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ENSMUST00000165878.2	chr10	+	2564	14	FSM	ENSMUSG00000004207.15	ENSMUST00000165878.2	2564	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	281.713585719074	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGGCCTTGTGTCTCT	4508	False	NA	NA	False	AATAAA	-16	NA	60120282	60138376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_60120354_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUST00000165953.3	chr17	-	1381	11	Antisense	novelGene_ENSMUSG00000024369.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	723	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTGGCTCGCGGCGATGA	5890	False	NA	NA	False	NA	NA	NA	35075348	35069383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr17_-_35069439_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ENSMUST00000165964.10	chr7	+	3166	28	FSM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_1	177.886980349259	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	3059	False	NA	30	True	AATAAA	-18	NA	13013190	13045350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_13013400_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ENSMUST00000166010.2	chrX	-	1318	4	FSM	ENSMUSG00000025264.13	ENSMUST00000166010.2	1318	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	140.42158745087	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATCCATTGTCCTCCCC	NA	False	NA	-3	True	AATAAA	-21	NA	149879539	149872476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879424
ENSMUST00000166021.8	chr3	+	1768	9	FSM	ENSMUSG00000028069.17	ENSMUST00000166021.8	1768	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	81.6783898898601	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGTTTTGTTTTTGA	1719	False	NA	39	True	TTTAAA	-28	NA	87950414	87963300	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_87950487_87950773_87950909_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ENSMUST00000166044.3	chr18	+	3107	19	FSM	ENSMUSG00000003779.17	ENSMUST00000166044.3	3107	19	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	232.455445087047	1508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	6275	False	NA	23	True	AATAAA	-20	NA	34758085	34765858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_34758317_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUST00000166078.9	chr8	-	2234	15	FSM	ENSMUSG00000031575.19	ENSMUST00000166078.9	2234	15	0	0	0	0	multi-exon	FALSE	canonical	3	3119	junction_12	186.608342443171	4903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTCACTGGAAGTGA	NA	False	NA	-6	True	AATAAA	-25	NA	26330110	26306897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039
ENSMUST00000166099.3	chr5	+	1101	5	FSM	ENSMUSG00000079165.11	ENSMUST00000166099.3	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_4	13.4976849866931	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTCTGCAGTGGGACAT	1204	False	NA	26	True	AATAAA	-18	NA	137639698	137641164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ENSMUST00000166104.9	chr13	+	1193	7	FSM	ENSMUSG00000015536.15	ENSMUST00000166104.9	1193	7	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_2	16.9844700306551	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATAGATCCTGTCTCC	NA	False	NA	NA	False	AATAAA	-18	NA	114954771	114965259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ENSMUST00000166115.9	chr19	-	1858	7	FSM	ENSMUSG00000024958.14	ENSMUST00000166115.9	1858	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	2.47767812455308	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTGTTCCTTCTCACC	6813	False	NA	1	True	AATAAA	-32	NA	6918561	6915424	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916628_6916779_6916896_6917123_6917719_6917770_6917850
ENSMUST00000166120.9	chr12	-	990	6	FSM	ENSMUSG00000021079.17	ENSMUST00000166120.9	990	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	130.329735670721	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTTGTCTTTACTGTA	NA	False	NA	-19	True	AATAAA	-12	NA	71183422	71169947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_71170461_71172235_71172332_71173106_71173172_71178774_71178861_71179280_71179417_71183328
ENSMUST00000166192.7	chr6	-	3155	24	FSM	ENSMUSG00000025607.16	ENSMUST00000166192.7	3155	24	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	47.3145369461355	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCAAAGTTGCTATACT	NA	False	NA	-14	True	AATAAA	-15	NA	30873729	30748410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_30748987_30749404_30749501_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ENSMUST00000166214.9	chr18	+	2906	24	FSM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_23	153.127237455201	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGGTTCTTTTTTTCT	9050	False	NA	14	True	ATTAAA	-7	NA	32970363	32999453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905_32998972_32999240
ENSMUST00000166223.2	chr15	-	1908	16	FSM	ENSMUSG00000022464.15	ENSMUST00000166223.2	1908	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	409.635849125646	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCGTGCAGTGCAGTGTG	NA	False	NA	-9	True	ATTAAA	-26	NA	96918203	96894645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96918183
ENSMUST00000166278.7	chr3	+	1689	3	FSM	ENSMUSG00000037661.15	ENSMUST00000166278.7	1689	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	125	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTATTTGTTTTTTGT	NA	False	NA	34	True	AATAAA	-19	NA	30910098	30951341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_30910207_30931383_30931482_30949858
ENSMUST00000166291.8	chr1	-	360	4	FSM	ENSMUSG00000090553.9	ENSMUST00000166291.8	360	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	1734.66788367879	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACATTGTTTCATTCTG	NA	False	NA	-14	True	AATAAA	-25	NA	133537970	133531613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_133531815_133536634_133536698_133537455_133537483_133537901
ENSMUST00000166382.5	chr5	-	3238	3	FSM	ENSMUSG00000061898.11	ENSMUST00000166382.5	3238	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	4.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGTTTATGTGTTGTG	3263	False	NA	NA	False	GATAAA	-2	NA	143162489	143157941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_143160814_143161790_143161887_143162219
ENSMUST00000166407.9	chr19	+	1033	10	FSM	ENSMUSG00000071655.13	ENSMUST00000166407.9	1033	10	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	323.787653323045	6846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTATATGCCTGGCTC	5912	False	NA	25	True	AATAAA	-13	NA	8848922	8853020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8848950_8849034_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ENSMUST00000166409.6	chr5	+	1562	6	FSM	ENSMUSG00000029178.15	ENSMUST00000166409.6	1562	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	271.090390829332	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGACCAATTTGTCGGTT	8246	False	NA	-65	True	NA	NA	NA	64969681	64986825	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_64969847_64974078_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ENSMUST00000166411.8	chr2	+	2088	12	FSM	ENSMUSG00000068882.14	ENSMUST00000166411.8	2088	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	503.342431457735	5743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTCACTTTGGACATA	NA	False	NA	22	True	ATTAAA	-23	NA	69691905	69702190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_69692084_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ENSMUST00000166412.2	chr19	+	447	4	FSM	ENSMUSG00000036372.15	ENSMUST00000166412.2	447	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	1710.34778789448	6879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATGTCCATTCTTAGGG	245	False	NA	33	True	AATAAA	-22	NA	10183396	10185188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10183489_10183787_10183898_10184527_10184665_10185080
ENSMUST00000166469.8	chr17	-	656	4	FSM	ENSMUSG00000023944.15	ENSMUST00000166469.8	656	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	4833.25875804536	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATCCGCAAGAACATCGT	NA	False	NA	NA	False	NA	NA	NA	45884181	45880503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45880753_45881183_45881469_45882804_45882838_45884092
ENSMUST00000166472.8	chr2	+	2770	11	FSM	ENSMUSG00000040282.14	ENSMUST00000166472.8	2770	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	96.2369991219593	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTACCCTTCTACCTGGA	NA	False	NA	7	True	AATAAA	-17	NA	115412196	115609249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517526_115517651_115607382
ENSMUST00000166478.8	chrX	-	1720	3	FSM	ENSMUSG00000031422.17	ENSMUST00000166478.8	1720	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1436	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135644435	135633701	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135635251_135636294_135636372_135644341
ENSMUST00000166497.9	chr14	-	2226	9	FSM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_8	7.63216876123687	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGCAACACCCAGGTA	NA	False	NA	NA	False	AATAAA	-13	NA	14466871	14413009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
ENSMUST00000166498.8	chr12	+	2076	12	FSM	ENSMUSG00000021111.16	ENSMUST00000166498.8	2076	12	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_9	335.398664968735	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTGTCTCTGTGTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	105750991	105780328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456
ENSMUST00000166518.8	chrX	+	800	6	FSM	ENSMUSG00000002014.13	ENSMUST00000166518.8	800	6	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_1	165.944569058466	7145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACACGGGGCTCCTGTGT	5432	False	NA	46	True	AATAAA	-28	NA	72830633	72834430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72830913_72832440_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ENSMUST00000166554.2	chrX	+	4993	5	FSM	ENSMUSG00000043384.16	ENSMUST00000166554.2	4993	5	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	19.765816451642	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	NA	False	NA	10	True	AATAAA	-17	NA	134698336	134704215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ENSMUST00000166615.3	chr8	+	4314	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_9	55.7196601685668	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGTGTCAGTGTAGCT	NA	False	NA	11	True	AATAAA	-14	NA	108162996	108285227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ENSMUST00000166627.8	chr17	+	1211	7	FSM	ENSMUSG00000073423.11	ENSMUST00000166627.8	1211	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	162.952702749397	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTACCTATGCCTTC	4917	False	NA	29	True	AATACA	-19	NA	33848063	33850690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_33848191_33848595_33848673_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ENSMUST00000166682.9	chr7	-	2745	22	FSM	ENSMUSG00000032637.16	ENSMUST00000166682.9	2745	22	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_21	274.001324127426	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTGGGGCTCCCCACCC	7024	False	NA	NA	False	NA	NA	NA	126101490	126092134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101401
ENSMUST00000166693.3	chr17	-	271	4	FSM	ENSMUSG00000067288.14	ENSMUST00000166693.3	271	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	9429.71906026662	60074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTGTCTAGAAATTGG	NA	False	NA	-27	True	AATAAA	-12	NA	34043450	34042025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34042068_34042166_34042305_34043272_34043321_34043407
ENSMUST00000166711.8	chr15	+	1932	11	FSM	ENSMUSG00000022407.11	ENSMUST00000166711.8	1932	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	319.033289799043	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832712	80853320	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ENSMUST00000166735.8	chr12	+	1033	9	FSM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	0	0	0	0	multi-exon	FALSE	canonical	3	1577	junction_3	94.8235202890085	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTCTTATTTCTGTGA	NA	False	NA	17	True	AATAAA	-20	NA	105751015	105775968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
ENSMUST00000166743.9	chr14	+	4542	4	FSM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_2	12.2836838484589	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTTCTTTGTGTATTT	9630	False	NA	7	True	AAGAAA	-18	NA	47535725	47560552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868
ENSMUST00000166769.8	chr5	-	1878	13	FSM	ENSMUSG00000029145.13	ENSMUST00000166769.8	1878	13	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_12	174.191864205983	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTGCCTTTGTATCT	NA	False	NA	-1	True	AATAAA	-23	NA	31350483	31344902	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31350115_31350336
ENSMUST00000166811.9	chr9	-	3088	18	FSM	ENSMUSG00000039542.17	ENSMUST00000166811.9	3088	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	47.8331876507352	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	8570	False	NA	NA	False	NA	NA	NA	49710172	49416347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431516_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
ENSMUST00000166860.2	chr1	+	2227	8	FSM	ENSMUSG00000000544.15	ENSMUST00000166860.2	2227	8	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_7	70.4990953770301	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCTTTGTTCACCCAT	NA	False	NA	9	True	AATAAA	-18	NA	165958035	165994078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715_165992866_165992923
ENSMUST00000166915.8	chr1	-	503	5	FSM	ENSMUSG00000090553.9	ENSMUST00000166915.8	503	5	0	0	0	0	multi-exon	FALSE	canonical	3	3763	junction_3	447.106461035848	35526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTCATTCTGGTGGC	NA	False	NA	-9	True	AATAAA	-30	NA	133538029	133531608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_133531815_133534238_133534318_133536634_133536698_133537455_133537483_133537901
ENSMUST00000166930.8	chrX	-	1926	4	FSM	ENSMUSG00000031422.17	ENSMUST00000166930.8	1926	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1454.90228766975	4280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135641904	135633701	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641694
ENSMUST00000166931.2	chr12	-	506	5	FSM	ENSMUSG00000021131.15	ENSMUST00000166931.2	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	979	junction_4	3763.79924411491	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATGATAGCGATCCTG	NA	False	NA	NA	False	NA	NA	NA	80690606	80681130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80689562_80689620_80690537
ENSMUST00000166938.8	chr6	+	2413	13	FSM	ENSMUSG00000052337.16	ENSMUST00000166938.8	2413	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	399.840558500788	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAGTACTCTATCCC	NA	False	NA	5	True	AATAAA	-12	NA	71808401	71852234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUST00000166940.3	chr12	+	2199	11	FSM	ENSMUSG00000021044.16	ENSMUST00000166940.3	2199	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	20.9752234791432	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGACTGTTCCTTCTCA	NA	False	NA	9	True	AATAAA	-22	NA	88327658	88428488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_88327743_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUST00000166975.8	chr6	+	2469	13	FSM	ENSMUSG00000052337.16	ENSMUST00000166975.8	2469	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	527.655558948154	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAGTACTCTATCCC	NA	False	NA	5	True	AATAAA	-12	NA	71808316	71852234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849879_71851300
ENSMUST00000166977.9	chr15	-	3365	16	FSM	ENSMUSG00000042632.18	ENSMUST00000166977.9	3365	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	51.9652020319581	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212376	79170427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
ENSMUST00000166979.8	chr3	-	3584	21	FSM	ENSMUSG00000002227.16	ENSMUST00000166979.8	3584	21	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_20	290.136325716033	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725879	104702151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725438_104725672
ENSMUST00000166983.3	chr5	+	622	3	FSM	ENSMUSG00000061882.13	ENSMUST00000166983.3	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTCTGTCCA	NA	False	NA	NA	False	ATTAAA	-27	NA	124068751	124074708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_124068924_124072134_124072328_124074451
ENSMUST00000167011.8	chr12	-	1681	3	FSM	ENSMUSG00000056459.15	ENSMUST00000167011.8	1681	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	42	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAATGTAGAAACTTTA	NA	False	NA	-12	True	ATTAAA	-19	NA	76416238	76395673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_76397048_76402662_76402843_76416111
ENSMUST00000167023.8	chr11	-	1909	14	FSM	ENSMUSG00000025155.16	ENSMUST00000167023.8	1909	14	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_13	260.320262471546	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687221	120680027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686968
ENSMUST00000167032.2	chr1	+	4125	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	1604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCTCCTGACTGTGT	9370	False	NA	14	True	AATAAA	-15	NA	87603960	87648224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ENSMUST00000167042.8	chr7	+	3007	10	FSM	ENSMUSG00000109378.2	ENSMUST00000167042.8	3007	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	228.074549215821	1158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTGCCTGTCCTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	30262768	30267383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519_30265807_30266173_30266926_30267005
ENSMUST00000167107.10	chr17	-	2659	4	FSM	ENSMUSG00000055240.18	ENSMUST00000167107.10	2659	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	5.79271573232759	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACTGATTTTTGCTTTT	NA	False	NA	NA	False	AATAAA	-35	NA	33613615	33599228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33601561_33605395_33605442_33605658_33605786_33613461
ENSMUST00000167110.8	chr11	-	3547	4	FSM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_3	463.171914327955	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTCCCCCCTCTCCCT	NA	False	NA	-6	True	AATAAA	-33	NA	96714839	96708239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714770
ENSMUST00000167111.6	chr3	-	1418	8	FSM	ENSMUSG00000038975.15	ENSMUST00000167111.6	1418	8	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_5	235.209329261041	1803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6964	False	NA	-2	True	AATAAA	-15	NA	153617782	153612925	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561
ENSMUST00000167140.8	chr15	+	1279	3	FSM	ENSMUSG00000071711.13	ENSMUST00000167140.8	1279	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	6.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACAAAAACATTTGTGG	NA	False	NA	NA	False	AATAAA	-6	NA	78290911	78298202	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_78290945_78294242_78294865_78297578
ENSMUST00000167143.2	chr11	-	1195	6	FSM	ENSMUSG00000040592.12	ENSMUST00000167143.2	1195	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	7.4027022093287	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATCTTCGTGATATCAT	5089	False	NA	-3	True	AATAAA	-17	NA	106205355	106202169	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_106202732_106202832_106202875_106203147_106203267_106203458_106203768_106204486_106204538_106205243
ENSMUST00000167149.8	chr11	-	4596	5	FSM	ENSMUSG00000038615.18	ENSMUST00000167149.8	4596	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	530.254891538023	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTCCCCCCTCTCCCT	NA	False	NA	-6	True	AATAAA	-33	NA	96720328	96708239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720236
ENSMUST00000167161.9	chr18	+	3146	19	FSM	ENSMUSG00000003779.17	ENSMUST00000167161.9	3146	19	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_1	232.664995218447	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGGGACAGAAAATTGATA	5855	False	NA	53	True	TATAAA	-2	NA	34757665	34765888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_34757906_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUST00000167163.8	chr13	-	1654	8	FSM	ENSMUSG00000060147.16	ENSMUST00000167163.8	1654	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	180.800939134278	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGTCTGCCTCACTGG	8372	False	NA	2	True	AATAAA	-28	NA	34120066	34101900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119555_34119778_34119904
ENSMUST00000167180.8	chr17	+	1324	6	FSM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	371.627232586634	2927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGGTTTGCACACATGA	NA	False	NA	9	True	AATAAA	-17	NA	48717041	48724282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
ENSMUST00000167182.8	chr6	+	2271	4	FSM	ENSMUSG00000042079.14	ENSMUST00000167182.8	2271	4	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_1	2299.04709728956	4407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	NA	False	NA	NA	False	AATAAA	-16	NA	117877300	117902582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_117877468_117894430_117894560_117896059_117896121_117900668
ENSMUST00000167220.4	chr6	-	4853	26	FSM	ENSMUSG00000053470.14	ENSMUST00000167220.4	4853	26	0	0	0	0	multi-exon	TRUE	canonical	3	176	junction_18	109.170809285266	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGATAATCATTTCTTA	NA	False	NA	-6	True	AATAAA	-16	NA	71609670	71565957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480
ENSMUST00000167225.2	chr5	-	712	2	FSM	ENSMUSG00000029713.16	ENSMUST00000167225.2	712	2	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_1	0	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGTCTCCTTGCTTACT	6122	False	NA	-6	True	CATAAA	-21	NA	137527182	137526389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137526872_137526952
ENSMUST00000167240.8	chr19	+	2192	17	FSM	ENSMUSG00000032946.17	ENSMUST00000167240.8	2192	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.2262715975236	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGCCTAAAACCCTCTGA	NA	False	NA	24	True	AATAAA	-26	NA	6450612	6465245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6450682_6451750_6451894_6452501_6452605_6453053_6453117_6453461_6453594_6454329_6454481_6454683_6454858_6454967_6455085_6457070_6457353_6458200_6458279_6458477_6458601_6458868_6458985_6463114_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
ENSMUST00000167246.2	chrX	-	2666	2	FSM	ENSMUSG00000034403.17	ENSMUST00000167246.2	2666	2	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	0	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATAAATAAAT	NA	False	NA	NA	False	AAAACA	-20	NA	98514341	98509373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_98511921_98514222
ENSMUST00000167256.8	chr13	+	1230	3	FSM	ENSMUSG00000052293.15	ENSMUST00000167256.8	1230	3	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	554	876	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGTACTTTGGCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	100788114	100792567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_100788226_100790698_100790792_100791541
ENSMUST00000167264.8	chr8	+	1566	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	0	0	0	0	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	3524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTAATGCTTTGTT	5234	False	NA	9	True	AATAAA	-13	NA	34222069	34267192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ENSMUST00000167271.9	chr13	-	595	4	FSM	ENSMUSG00000043190.15	ENSMUST00000167271.9	595	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	32.0555074137902	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGTAATTTTGTTTC	NA	False	NA	-9	True	NA	NA	NA	76166838	76150885	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76166776
ENSMUST00000167288.8	chr4	-	2074	13	FSM	ENSMUSG00000000409.15	ENSMUST00000167288.8	2074	13	0	0	0	0	multi-exon	TRUE	canonical	3	4	junction_12	60.4484973620795	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACTGCATACTTTATTT	NA	False	NA	5	True	NA	NA	NA	129452165	129442136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080_129450231_129450436_129450541_129450826_129450926_129451157_129451249_129451418_129451501_129451873_129451984_129452080
ENSMUST00000167290.8	chr8	-	2892	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	1601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTCTATCTACTCCTAT	NA	False	NA	1	True	AATAAA	-27	NA	73324932	73319031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
ENSMUST00000167316.8	chr5	+	4104	4	FSM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_2	68.241401574769	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGACTCTTTGTTTTGAG	1299	False	NA	16	True	NA	NA	NA	145168532	145184112	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145168642_145170250_145170413_145179729_145179835_145180384
ENSMUST00000167354.8	chr3	+	1986	15	FSM	ENSMUSG00000027680.16	ENSMUST00000167354.8	1986	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	356.997770529825	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAAATGTTATTTTGTT	4849	False	NA	12	True	ATTAAA	-15	NA	34074246	34123486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_34074313_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ENSMUST00000167361.8	chr7	+	860	8	FSM	ENSMUSG00000078765.12	ENSMUST00000167361.8	860	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	185.966751472034	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTCTGTGGTTTCCTTC	NA	False	NA	32	True	AATAAA	-20	NA	30262774	30264786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30262834_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ENSMUST00000167371.8	chr19	+	1382	10	FSM	ENSMUSG00000024909.16	ENSMUST00000167371.8	1382	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	25.486864203224	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	False	NA	10	True	AATAAA	-15	NA	5524767	5531881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ENSMUST00000167386.8	chr5	-	894	5	FSM	ENSMUSG00000029580.15	ENSMUST00000167386.8	894	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2041.52069546209	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACGAGCGGTTCCGATGC	8918	False	NA	NA	False	NA	NA	NA	142892480	142890149	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_142890538_142890842_142890906_142890991_142891232_142891318_142891448_142892406
ENSMUST00000167399.2	chr16	+	1421	8	FSM	ENSMUSG00000022871.14	ENSMUST00000167399.2	1421	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	210.181845465457	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAACCTGTTGAC	NA	False	NA	14	True	AATAAA	-20	NA	22740494	22758507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22740626_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ENSMUST00000167406.2	chr18	+	2393	8	FSM	ENSMUSG00000091896.9	ENSMUST00000167406.2	2393	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	366.191485539509	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTCACCTGTCTCATC	NA	False	NA	12	True	AATAAA	-23	NA	35904654	35940216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570_35938875_35938912
ENSMUST00000167435.8	chr7	+	2865	15	FSM	ENSMUSG00000004056.16	ENSMUST00000167435.8	2865	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	138.881042181973	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCCAGTCCACATTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	27291170	27338875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486_27338705_27338813
ENSMUST00000167436.3	chr11	+	606	4	FSM	ENSMUSG00000060938.15	ENSMUST00000167436.3	606	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	7534.13486886333	179515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGTCTTGTGTGGTGT	NA	False	NA	32	True	ATTAAA	-13	NA	68792460	68795359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_68792584_68793095_68793269_68794004_68794146_68795190
ENSMUST00000167446.8	chrX	+	2953	9	FSM	ENSMUSG00000047757.18	ENSMUST00000167446.8	2953	9	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_5	7.72981241687015	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTTGTTTTCTTTTAC	NA	False	NA	NA	False	ATTAAA	-17	NA	163763587	163780265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
ENSMUST00000167449.2	chr14	-	856	3	FSM	ENSMUSG00000021910.16	ENSMUST00000167449.2	856	3	0	0	0	0	multi-exon	FALSE	canonical	3	973	junction_1	14.5	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACCACACCTTGGGCGG	NA	False	NA	NA	False	NA	NA	NA	30895685	30893970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_30894556_30895020_30895150_30895543
ENSMUST00000167493.9	chr7	-	1656	10	FSM	ENSMUSG00000038650.16	ENSMUST00000167493.9	1656	10	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_9	147.871899850621	2673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGGTCCTTGTCGTTC	7992	False	NA	NA	False	ATTAAA	-14	NA	140752770	140740240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140752654
ENSMUST00000167496.8	chr4	+	4312	20	FSM	ENSMUSG00000028309.15	ENSMUST00000167496.8	4312	20	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	16.450883834839	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTTTGTGGTGTTC	-19	True	NA	4	True	ATTAAA	-16	NA	49632059	49656886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ENSMUST00000167513.3	chr13	-	1778	10	FSM	ENSMUSG00000021432.16	ENSMUST00000167513.3	1778	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	18.3127830951868	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTTTTAATAGAATTTG	NA	False	NA	NA	False	AATAAA	-24	NA	39144505	39116280	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39128475_39128631_39138084_39138207_39139624_39139913_39144385
ENSMUST00000167516.3	chr13	-	1743	3	FSM	ENSMUSG00000091183.6	ENSMUST00000167516.3	1743	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	1.5	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATCAACGTGATAGAGC	NA	False	NA	NA	False	NA	NA	NA	62924903	62921421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62922977_62924530_62924592_62924776
ENSMUST00000167624.2	chr17	-	895	7	FSM	ENSMUSG00000024026.14	ENSMUST00000167624.2	895	7	0	0	0	0	multi-exon	FALSE	canonical	3	704	junction_1	947.318613537998	1988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGTCTGGGCAGCAAG	NA	False	NA	-17	True	AATAAA	-19	NA	30831633	30811839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_30812049_30813088_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ENSMUST00000167643.4	chr15	-	1145	3	FSM	ENSMUSG00000091780.4	ENSMUST00000167643.4	1145	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	1.5	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCATGTGCTCTGTAC	NA	False	NA	-7	True	ATTAAA	-14	NA	89258021	89255839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_89256669_89257625_89257806_89257885
ENSMUST00000167661.7	chr2	-	1151	9	FSM	ENSMUSG00000015790.17	ENSMUST00000167661.7	1151	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	110.059571937201	1498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTCAGTCTGAAACC	NA	False	NA	-5	True	AATAAA	-19	NA	26806480	26803394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805782_26805966_26806019_26806268
ENSMUST00000167662.8	chr17	+	2754	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_9	34.0783411176855	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTGCTGTGACTCTGC	NA	False	NA	11	True	ATTAAA	-15	NA	26780462	26875905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ENSMUST00000167715.8	chr9	+	4961	22	FSM	ENSMUSG00000042557.15	ENSMUST00000167715.8	4961	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	84.9193294663047	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGTCCCTTGTCCTC	NA	False	NA	NA	False	AATAAA	-24	NA	56982621	57035650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_56982630_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ENSMUST00000167718.2	chr3	+	2056	12	FSM	ENSMUSG00000001416.14	ENSMUST00000167718.2	2056	12	0	0	0	0	multi-exon	FALSE	canonical	3	2432	junction_7	97.6323005756931	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGGCAAACTGGTGCT	3841	False	NA	NA	False	NA	NA	NA	88204459	88228814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88204574_88206648_88206711_88208106_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320
ENSMUST00000167721.8	chr5	-	1242	5	FSM	ENSMUSG00000029580.15	ENSMUST00000167721.8	1242	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1798.88215289385	11084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTGTCTTTTTTTAATA	8941	False	NA	6	True	NA	NA	NA	142892457	142889255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_142889697_142889821_142890004_142890098_142890538_142891318_142891448_142892406
ENSMUST00000167741.9	chr17	-	1129	4	FSM	ENSMUSG00000024248.15	ENSMUST00000167741.9	1129	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	605.058858477605	11913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGATGTTTTTAGTTT	9947	False	NA	-39	True	AATAAA	-7	NA	83821759	83809362	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_83810167_83811359_83811429_83811528_83811658_83821632
ENSMUST00000167816.8	chr12	+	2657	7	FSM	ENSMUSG00000040877.17	ENSMUST00000167816.8	2657	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.6713610367747	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCGTGGTCATGGTG	4850	False	NA	NA	False	NA	NA	NA	108860197	108994378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_108860240_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
ENSMUST00000167866.2	chr9	+	2403	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	0	0	0	0	multi-exon	FALSE	canonical	3	1656	junction_1	98.4146330583008	5788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGGCGTTTGCATTCTC	NA	False	NA	35	True	AATAAA	-15	NA	54493794	54511945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUST00000167918.8	chr5	-	4232	11	FSM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_10	456.056180749697	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTAATCTGAAGTTATA	NA	False	NA	0	True	AATAAA	-33	NA	92231416	92200004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ENSMUST00000167926.8	chr4	+	1505	9	FSM	ENSMUSG00000028937.15	ENSMUST00000167926.8	1505	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	152.008172066504	1690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTAGGTGGTCATTTGTC	NA	False	NA	20	True	AATAAA	-25	NA	152270590	152356312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_152270843_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ENSMUST00000167930.8	chr7	-	3376	23	FSM	ENSMUSG00000060279.15	ENSMUST00000167930.8	3376	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	144.442358888666	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	False	NA	-3	True	AATAAA	-24	NA	44578914	44549797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551140_44552173_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ENSMUST00000167937.2	chr5	-	714	6	FSM	ENSMUSG00000039474.14	ENSMUST00000167937.2	714	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	53.9740678474395	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTCTATCTGTCC	NA	False	NA	NA	False	NA	NA	NA	37134300	37125844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_37126023_37128901_37128968_37130529_37130611_37131077_37131249_37132814_37132960_37134227
ENSMUST00000167943.8	chr10	-	3098	28	FSM	ENSMUSG00000052798.14	ENSMUST00000167943.8	3098	28	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_26	174.04731866881	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATGAGAGTTTTCTCTT	NA	False	NA	-7	True	AATAAA	-26	NA	117628603	117586528	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625960_117626371_117626464_117628508
ENSMUST00000167998.2	chr3	+	1938	12	FSM	ENSMUSG00000028048.12	ENSMUST00000167998.2	1938	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	111.217603696091	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGTGCTATCTGTGAC	NA	False	NA	3	True	ATTAAA	-13	NA	89110246	89115988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89110394_89110498_89110668_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ENSMUST00000168005.8	chr7	-	3004	19	FSM	ENSMUSG00000031024.14	ENSMUST00000168005.8	3004	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_17	53.6950982888281	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTGTGTTCCTTTCAC	NA	False	NA	2	True	AATAAA	-26	NA	109216354	109123117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109169213_109169319_109216264
ENSMUST00000168015.8	chr3	-	3460	21	FSM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_20	265.434944948852	1977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725621	104702151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725473_104725573
ENSMUST00000168019.2	chr9	-	960	1	FSM	ENSMUSG00000058922.8	ENSMUST00000168019.2	960	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTACATACAGCCAGGAA	NA	False	NA	NA	False	NA	NA	NA	123519257	123518297	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_123518300_123519300
ENSMUST00000168036.8	chr10	-	2693	15	FSM	ENSMUSG00000020166.16	ENSMUST00000168036.8	2693	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	136.561565692876	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGGCTTTGATTTGAA	NA	False	NA	-1	True	AATAAA	-23	NA	116417416	116321065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385081_116417357
ENSMUST00000168062.8	chr3	+	1943	13	FSM	ENSMUSG00000001416.14	ENSMUST00000168062.8	1943	13	0	0	0	0	multi-exon	FALSE	canonical	3	2266	junction_3	126.158630303281	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGGCAAACTGGTGCT	3876	False	NA	NA	False	NA	NA	NA	88204494	88228814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320
ENSMUST00000168083.2	chr19	-	603	5	FSM	ENSMUSG00000025204.11	ENSMUST00000168083.2	603	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_4	2211.89753096747	8148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGCTCTGGTTTCTGTGT	1995	False	NA	-20	True	AATAAA	-16	NA	44543858	44538691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369_44543454_44543755
ENSMUST00000168099.9	chr1	-	2590	19	FSM	ENSMUSG00000025968.17	ENSMUST00000168099.9	2590	19	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_18	163.056757519704	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTAAAGTTATACTAT	NA	False	NA	NA	False	NA	NA	NA	63215891	63182893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215586
ENSMUST00000168106.8	chr3	+	2890	6	FSM	ENSMUSG00000015749.13	ENSMUST00000168106.8	2890	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	657.373987924682	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGGACGGGCAGCGCTG	NA	False	NA	-16	True	NA	NA	NA	95836697	95854581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95836963_95841220_95841371_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUST00000168111.8	chr7	-	796	6	FSM	ENSMUSG00000064179.14	ENSMUST00000168111.8	796	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	20.0858158908221	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTCGAGTTGGAGGCCGC	9885	False	NA	NA	False	GGGGCT	-5	NA	4512937	4507782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511625_4512009_4512124_4512556
ENSMUST00000168115.8	chr11	-	1771	11	FSM	ENSMUSG00000020528.15	ENSMUST00000168115.8	1771	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_10	57.9565354382058	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGGATAGTTGTTCT	216	False	NA	-3	True	AATAAA	-26	NA	61652914	61620475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61652779
ENSMUST00000168129.10	chr12	-	3230	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_11	21.4240924087157	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAGGAGACATGAGC	8230	False	NA	-29	True	AATAAA	-20	NA	28800471	28740626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
ENSMUST00000168166.8	chr9	+	3944	4	FSM	ENSMUSG00000007656.14	ENSMUST00000168166.8	3944	4	0	0	0	0	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	15143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTATTGATTTTAAT	NA	False	NA	1	True	AATAAA	-11	NA	74944895	74967576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
ENSMUST00000168176.8	chr2	+	1806	5	FSM	ENSMUSG00000032679.13	ENSMUST00000168176.8	1806	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	94.0063162771524	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAGATTATCTTGAC	NA	False	NA	NA	False	ATTAAA	-15	NA	103926145	103945694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_103926273_103928069_103928190_103934515_103934595_103941084_103941190_103944319
ENSMUST00000168177.8	chr9	+	5086	21	FSM	ENSMUSG00000042557.15	ENSMUST00000168177.8	5086	21	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_18	80.3800970390059	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGTCCCTTGTCCTC	NA	False	NA	NA	False	AATAAA	-24	NA	56983682	57035650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
ENSMUST00000168185.8	chr15	-	4235	26	FSM	ENSMUSG00000059323.15	ENSMUST00000168185.8	4235	26	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_21	25.6881606970994	319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524158	76510437	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ENSMUST00000168186.8	chr12	+	2436	21	FSM	ENSMUSG00000021111.16	ENSMUST00000168186.8	2436	21	0	0	0	0	multi-exon	FALSE	canonical	3	846	junction_12	380.482125072913	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAGTTAAAGTCTGTAA	NA	False	NA	NA	False	ATTAAA	-13	NA	105750962	105801152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968
ENSMUST00000168194.3	chr7	+	1076	6	FSM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	28.032837887021	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCTGTTCTTCTTCATG	NA	False	NA	19	True	AATAAA	-16	NA	139616324	139620515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
ENSMUST00000168218.8	chr11	-	1511	3	FSM	ENSMUSG00000043284.13	ENSMUST00000168218.8	1511	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	10	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTCTCTTTTCTGCC	7583	False	NA	-5	True	ATTAAA	-17	NA	60769864	60755277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_60756175_60766585_60766874_60769538
ENSMUST00000168247.2	chr7	+	2499	7	FSM	ENSMUSG00000058638.15	ENSMUST00000168247.2	2499	7	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_5	14.5764269360575	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTGCCTTTCAAAGCA	NA	False	NA	NA	False	GATAAA	-26	NA	12569409	12583852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ENSMUST00000168265.8	chr17	+	1953	7	FSM	ENSMUSG00000024160.17	ENSMUST00000168265.8	1953	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	56.1921307262463	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCTGTGTCTATTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	25105647	25111121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25106080_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ENSMUST00000168266.8	chr2	+	2721	17	FSM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	374.603436149483	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84867794	84877450	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_84867875_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ENSMUST00000168275.9	chr14	+	2657	14	FSM	ENSMUSG00000022019.17	ENSMUST00000168275.9	2657	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_12	16.6232175269033	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCTGGTTCACTTGTC	NA	False	NA	7	True	AATAAA	-21	NA	87654074	87782940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080_87749207_87776832_87776958_87782692
ENSMUST00000168345.6	chr3	+	1295	7	FSM	ENSMUSG00000091512.6	ENSMUST00000168345.6	1295	7	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_3	73.5090697351921	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTGTATAGGCCT	80	False	NA	2	True	AATAAA	-22	NA	137624286	137634526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
ENSMUST00000168413.8	chr14	+	1844	13	FSM	ENSMUSG00000004561.15	ENSMUST00000168413.8	1844	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	44.5586380202787	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52122332	52129317	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_52122481_52122607_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126855_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ENSMUST00000168419.3	chr18	-	2152	11	FSM	ENSMUSG00000024644.18	ENSMUST00000168419.3	2152	11	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_9	38.6638073655454	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTGCCGTGGTCTGACT	NA	False	NA	-2	True	AATAAA	-21	NA	84700184	84685593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962
ENSMUST00000168434.8	chr11	-	3056	14	FSM	ENSMUSG00000020530.15	ENSMUST00000168434.8	3056	14	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_13	138.817874810357	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTCTTCCTTCCTCA	NA	False	NA	0	True	AATAAA	-16	NA	84761643	84723186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ENSMUST00000168457.3	chr7	+	1227	2	FSM	ENSMUSG00000047751.10	ENSMUST00000168457.3	1227	2	0	0	0	0	multi-exon	FALSE	canonical	3	805	junction_1	0	1846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTGAATGAATTCGGAC	NA	False	NA	NA	False	AATAAA	-20	NA	139523701	139525025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_139524343_139524439
ENSMUST00000168463.8	chr12	-	431	4	FSM	ENSMUSG00000091803.8	ENSMUST00000168463.8	431	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	143.25501736414	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTATGCTTTTCAGTCT	995	False	NA	-6	True	ATTAAA	-14	NA	81531887	81518866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_81518946_81521360_81521424_81527704_81527777_81531670
ENSMUST00000168483.9	chr4	+	4244	5	FSM	ENSMUSG00000066007.16	ENSMUST00000168483.9	4244	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	207.21064161862	4780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146093393	146135319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_146093548_146094927_146095022_146126781_146126867_146129876_146130004_146131535
ENSMUST00000168502.8	chr9	+	4899	21	FSM	ENSMUSG00000042557.15	ENSMUST00000168502.8	4899	21	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_18	83.2564712199598	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGTCCCTTGTCCTC	NA	False	NA	NA	False	AATAAA	-24	NA	56988441	57035650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
ENSMUST00000168503.8	chr4	-	1240	6	FSM	ENSMUSG00000055401.15	ENSMUST00000168503.8	1240	6	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_5	226.118552976088	2183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTCATCCTGTTTG	NA	False	NA	54	True	NA	NA	NA	148236592	148230172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236469
ENSMUST00000168520.3	chr10	-	1043	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	12.3515181253156	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTATTTTTTGGCTCTT	NA	False	NA	0	True	AATAAA	-25	NA	126737217	126723117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
ENSMUST00000168565.2	chr11	+	3535	24	FSM	ENSMUSG00000038534.20	ENSMUST00000168565.2	3535	24	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	38.5858236208462	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96941645	96959730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_96941780_96943050_96943203_96943352_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949437_96949936_96949939_96949942_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ENSMUST00000168584.9	chr14	+	1498	10	FSM	ENSMUSG00000021916.17	ENSMUST00000168584.9	1498	10	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_1	28.2055944017416	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGCTTCCCCATTT	3526	False	NA	8	True	AATAAA	-19	NA	30723356	30733947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_30723386_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ENSMUST00000168678.8	chr9	+	5206	22	FSM	ENSMUSG00000042557.15	ENSMUST00000168678.8	5206	22	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	78.0412705515297	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACATAAGTCCCTTGTCC	NA	False	NA	NA	False	AATAAA	-22	NA	56983659	57035648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_56983915_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ENSMUST00000168697.4	chr10	-	495	1	FSM	ENSMUSG00000069682.7	ENSMUST00000168697.4	495	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1004	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGAAGCAACAAGAAAATA	NA	False	NA	-58	True	NA	NA	NA	29575286	29574791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_29574800_29575300
ENSMUST00000168698.2	chr8	-	1520	5	FSM	ENSMUSG00000031827.14	ENSMUST00000168698.2	1520	5	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	96.0608531088497	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAATGAGTTGGGTTG	NA	False	NA	NA	False	AGTAAA	-11	NA	120567261	120535963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_120536789_120536839_120537095_120549392_120549551_120566880_120566964_120567062
ENSMUST00000168729.8	chr14	-	2852	15	FSM	ENSMUSG00000022218.17	ENSMUST00000168729.8	2852	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_14	53.0521499304684	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGGCCAAGAAGTATGGA	398	False	NA	2	True	AATAAA	-25	NA	55950949	55937465	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950744
ENSMUST00000168774.8	chr16	-	3773	13	FSM	ENSMUSG00000013089.16	ENSMUST00000168774.8	3773	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	460.814677138941	2319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGCATTCCTGCAACCTG	6495	False	NA	-20	True	AATAAA	-15	NA	22255264	22200065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22240568_22240623_22254626_22254678_22254769_22254818_22254950_22255039_22255187
ENSMUST00000168776.8	chr1	+	3267	13	FSM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	258.994798317564	2789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406782	93437455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_93406903_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUST00000168805.8	chr15	+	827	5	FSM	ENSMUSG00000001289.13	ENSMUST00000168805.8	827	5	0	0	0	0	multi-exon	FALSE	canonical	3	835	junction_1	33.0709464636257	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGGCAATGGCCTCCTGG	386	False	NA	-52	True	AATGAA	-40	NA	102234602	102239843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102234696_102234867_102235285_102236956_102237032_102237146_102237253_102239707
ENSMUST00000168811.2	chr15	+	1464	11	FSM	ENSMUSG00000078954.10	ENSMUST00000168811.2	1464	11	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_5	23.8748821986623	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGGGGGTTTTGTGCTT	1022	False	NA	9	True	ATTAAA	-16	NA	84617092	84656405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ENSMUST00000168817.2	chr1	-	1298	3	FSM	ENSMUSG00000059498.14	ENSMUST00000168817.2	1298	3	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_2	7.5	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATCTCCTTTTGGTGAC	NA	False	NA	-7	True	AATAAA	-24	NA	170885623	170878742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_170879422_170881507_170881763_170885259
ENSMUST00000168833.9	chr14	+	2993	3	FSM	ENSMUSG00000037536.15	ENSMUST00000168833.9	2993	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	10.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTGGTCTTAAAATA	NA	False	NA	10	True	AATAAA	-18	NA	47710075	47769415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_47710175_47763661_47763772_47766631
ENSMUST00000168844.9	chr9	-	3575	17	FSM	ENSMUSG00000032396.18	ENSMUST00000168844.9	3575	17	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGCTCAAATTGATTCT	5087	False	NA	NA	False	NA	NA	NA	64248539	64214037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
ENSMUST00000168846.3	chr15	-	1652	12	FSM	ENSMUSG00000067713.8	ENSMUST00000168846.3	1652	12	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_11	39.9075377622816	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9349	False	NA	-4	True	ATTAAA	-22	NA	98729402	98710677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
ENSMUST00000168891.8	chr16	+	2203	10	FSM	ENSMUSG00000022884.17	ENSMUST00000168891.8	2203	10	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_3	486.088189935799	4911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAATTACCAAGA	5774	False	NA	NA	False	NA	NA	NA	22926228	22932867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ENSMUST00000168900.3	chr3	+	582	5	FSM	ENSMUSG00000042747.13	ENSMUST00000168900.3	582	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	789.56613877496	9262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTCTTTGTAGCTGTG	7591	False	NA	7	True	AATAAA	-1	NA	89153740	89157016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89153901_89154087_89154240_89154371_89154436_89156380_89156448_89156877
ENSMUST00000168972.2	chr14	+	1573	6	FSM	ENSMUSG00000052334.12	ENSMUST00000168972.2	1573	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_4	33.7911230946827	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41765951	41825776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_41766287_41818127_41818291_41819245_41819378_41820058_41820192_41820192_41820240_41825013
ENSMUST00000168974.9	chr4	-	2982	21	FSM	ENSMUSG00000003644.18	ENSMUST00000168974.9	2982	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	260.286087795718	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	NA	False	NA	-9	True	AATAAA	-14	NA	133602042	133574604	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133601918
ENSMUST00000169008.8	chr9	+	562	6	FSM	ENSMUSG00000032301.14	ENSMUST00000169008.8	562	6	0	0	0	0	multi-exon	FALSE	canonical	3	1724	junction_4	75.8957179292745	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTGTTCTGCTTTA	NA	False	NA	NA	False	AATAAA	-8	NA	54858088	54862316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164
ENSMUST00000169023.2	chr14	+	1314	4	FSM	ENSMUSG00000091477.2	ENSMUST00000169023.2	1314	4	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	5.8878405775519	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTGGTATCACCCTA	NA	False	NA	NA	False	AATAAA	-42	NA	43781032	43788670	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_43781231_43781959_43782123_43783111_43783244_43787849
ENSMUST00000169032.8	chr1	-	2283	9	FSM	ENSMUSG00000025950.17	ENSMUST00000169032.8	2283	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_8	288.761904516506	1841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTATTATGTGTTTT	NA	False	NA	-8	True	ATTAAA	-26	NA	65225638	65197776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65225463
ENSMUST00000169061.8	chr15	+	4570	35	FSM	ENSMUSG00000022191.17	ENSMUST00000169061.8	4570	35	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	145.136545301337	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTCTTTGCTACAGAGTA	5	True	NA	29	True	ATTAAA	-19	NA	12824900	12935376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_12825029_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ENSMUST00000169068.8	chr9	-	1364	6	FSM	ENSMUSG00000040813.17	ENSMUST00000169068.8	1364	6	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_5	120.179865202121	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	8113	False	NA	0	True	AATAAA	-28	NA	106562881	106535944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562833
ENSMUST00000169088.8	chr12	+	5557	34	FSM	ENSMUSG00000002900.18	ENSMUST00000169088.8	5557	34	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	26.2601941375773	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGGGGCTGTAGAGGG	NA	False	NA	NA	False	NA	NA	NA	31315232	31379492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_31315344_31315478_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ENSMUST00000169094.8	chr5	-	2716	12	FSM	ENSMUSG00000029405.17	ENSMUST00000169094.8	2716	12	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_11	559.822935407495	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTTCTTCAGTTAAC	NA	False	NA	-9	True	AGTAAA	-17	NA	92231372	92201575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ENSMUST00000169186.3	chr16	+	1320	2	FSM	ENSMUSG00000035790.16	ENSMUST00000169186.3	1320	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATAAGTCTTACTGGC	NA	False	NA	12	True	AATAAA	-12	NA	31922695	31926873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_31922866_31925723
ENSMUST00000169230.2	chr17	+	2246	18	FSM	ENSMUSG00000007034.16	ENSMUST00000169230.2	2246	18	0	0	0	0	multi-exon	TRUE	non_canonical	1	4	junction_1	7.17888098382546	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAATACCCAGTAAGAAA	120	False	NA	NA	False	ATTAAA	-21	NA	35136694	35149412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35136853_35137214_35137315_35137395_35137519_35137820_35137882_35140040_35140132_35140207_35140292_35140503_35140740_35140837_35140938_35142403_35142497_35142723_35142827_35146649_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
ENSMUST00000169308.8	chr17	+	1026	5	FSM	ENSMUSG00000025731.17	ENSMUST00000169308.8	1026	5	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	48.8287824955732	1528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGGGAATACCTGGGAG	7195	False	NA	39	True	AATAAA	-40	NA	26094474	26096143	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634
ENSMUST00000169309.3	chr10	+	1277	10	FSM	ENSMUSG00000035351.17	ENSMUST00000169309.3	1277	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	172.048514547568	2779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTCCTATTGTG	NA	False	NA	10	True	AATAAA	-18	NA	87982938	88014250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_87983032_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
ENSMUST00000169314.9	chr13	+	3027	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	0	0	0	0	multi-exon	TRUE	canonical	3	487	junction_1	56.3576747213722	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAGGTAAAATACTTGT	NA	False	NA	75	True	TATAAA	-6	NA	8935536	8942487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
ENSMUST00000169390.8	chr5	+	1833	6	FSM	ENSMUSG00000029326.14	ENSMUST00000169390.8	1833	6	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	20.2918702932973	1959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTTCATACAGACGT	NA	False	NA	15	True	AATAAA	-15	NA	100187843	100216619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ENSMUST00000169407.9	chr5	-	3276	5	FSM	ENSMUSG00000029634.16	ENSMUST00000169407.9	3276	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	52.1488254901297	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTGTGTGCAAACTTA	2835	False	NA	NA	False	ATTAAA	-24	NA	146157711	146146005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146157547
ENSMUST00000169418.8	chrX	-	1782	3	FSM	ENSMUSG00000031422.17	ENSMUST00000169418.8	1782	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1462	1508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135642101	135633701	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_135635251_135640553_135640644_135641958
ENSMUST00000169426.8	chr3	+	915	4	FSM	ENSMUSG00000015749.13	ENSMUST00000169426.8	915	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	725.485737665156	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGTAATATGAAATGGCA	NA	False	NA	82	True	TATAAA	-17	NA	95836594	95852947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95836963_95845315_95845352_95851618_95851674_95852491
ENSMUST00000169437.9	chr7	-	2274	5	FSM	ENSMUSG00000070436.13	ENSMUST00000169437.9	2274	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	667.492462504259	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAAGCCTGTGATTTATG	NA	False	NA	NA	False	ATTAAA	-30	NA	99002321	98994582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002088
ENSMUST00000169492.8	chr9	+	3963	4	FSM	ENSMUSG00000007656.14	ENSMUST00000169492.8	3963	4	0	0	0	0	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	15159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTTTTGTCTTATTT	NA	False	NA	20	True	AATAAA	-30	NA	74944895	74967595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
ENSMUST00000169540.8	chrX	-	1563	3	FSM	ENSMUSG00000079349.10	ENSMUST00000169540.8	1563	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	8.5	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTTTAGTTTCTTTTT	NA	False	NA	0	True	AATAAA	-18	NA	153844549	153836056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_153837456_153838390_153838480_153844474
ENSMUST00000169543.8	chr17	+	778	5	FSM	ENSMUSG00000044279.16	ENSMUST00000169543.8	778	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	66.6520817379322	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTAGCTGTAAGCTCT	1578	False	NA	NA	False	AATAAA	-30	NA	57369282	57372917	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089_57372234_57372608
ENSMUST00000169550.8	chr4	+	2660	10	FSM	ENSMUSG00000059939.14	ENSMUST00000169550.8	2660	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	55.5417760689095	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTTGAGGTCATGATG	8271	False	NA	20	True	NA	NA	NA	156194454	156211720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ENSMUST00000169576.8	chr10	-	2955	17	FSM	ENSMUSG00000020166.16	ENSMUST00000169576.8	2955	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	182.219465463353	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417401	116321069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373354_116384937_116385011_116417357
ENSMUST00000169591.8	chr17	+	2242	13	FSM	ENSMUSG00000048440.17	ENSMUST00000169591.8	2242	13	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	14.6806278249036	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATGTCTTGGTTCCATT	NA	False	NA	21	True	NA	NA	NA	32755531	32770772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_32755630_32755968_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ENSMUST00000169611.4	chr17	+	3674	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	525	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTCCTGTTGTGTGTTC	NA	False	NA	NA	False	TATAAA	-23	NA	41245575	41272879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ENSMUST00000169613.4	chr19	-	821	7	FSM	ENSMUSG00000060803.7	ENSMUST00000169613.4	821	7	0	0	0	0	multi-exon	FALSE	canonical	3	1999	junction_6	828.939215034626	19156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	4087985	4085406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087862
ENSMUST00000169638.4	chr7	+	2914	15	FSM	ENSMUSG00000061079.15	ENSMUST00000169638.4	2914	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	69.9797711295696	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTGTTTGTTTCATT	NA	False	NA	19	True	AATACA	-17	NA	109660928	109694601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ENSMUST00000169673.3	chr19	+	2757	10	FSM	ENSMUSG00000024989.16	ENSMUST00000169673.3	2757	10	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	107.147988119351	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTCTAGTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	38043489	38062869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_38043766_38045857_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ENSMUST00000169681.3	chr15	+	3854	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	0	0	0	0	multi-exon	FALSE	canonical	3	620	junction_1	87.2144027143242	7467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAATGTTGCAGTTTAT	NA	False	NA	49	True	AATAAA	-19	NA	101982207	102005608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUST00000169712.3	chr10	+	1991	7	FSM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_5	12.6150263134442	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTGAGTATTTAACAT	NA	False	NA	7	True	AATAAA	-14	NA	20223515	20237050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20230012_20233000_20233513_20236280
ENSMUST00000169734.8	chr11	-	2097	19	FSM	ENSMUSG00000017288.16	ENSMUST00000169734.8	2097	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	18.8620724677268	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCAAGCTTTGTATGG	NA	False	NA	NA	False	NA	NA	NA	76070342	75953810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004904_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76029133_76029221_76054623_76054691_76057024_76057075_76065452_76065534_76070238
ENSMUST00000169736.8	chr7	+	3145	13	FSM	ENSMUSG00000062031.14	ENSMUST00000169736.8	3145	13	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	11.7505910016854	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGAGTGTGTGATGGA	NA	False	NA	9	True	ATTAAA	-21	NA	140521478	140527571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ENSMUST00000169807.8	chr11	-	2347	10	FSM	ENSMUSG00000018537.17	ENSMUST00000169807.8	2347	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_9	43.2000800182158	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGTGGTTCTTTGGGA	NA	False	NA	-3	True	AATAAA	-17	NA	97590474	97579648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
ENSMUST00000169826.3	chr14	+	519	6	FSM	ENSMUSG00000025290.18	ENSMUST00000169826.3	519	6	0	0	0	0	multi-exon	FALSE	canonical	3	4464	junction_5	3607.86166031903	147145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTCCTACACGTCTG	NA	False	NA	4	True	AATAAA	-3	NA	24540785	24545913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545497_24545518_24545842
ENSMUST00000169828.8	chr11	-	3530	4	FSM	ENSMUSG00000038615.18	ENSMUST00000169828.8	3530	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	612.843826399153	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTCCCCCCTCTCCCT	NA	False	NA	-6	True	AATAAA	-33	NA	96714953	96708239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714901
ENSMUST00000169861.9	chr19	+	3664	9	FSM	ENSMUSG00000024976.15	ENSMUST00000169861.9	3664	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	127.929668177479	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGATTTTTGCTTTTC	3358	False	NA	NA	False	ATTAAA	-20	NA	53932736	54021298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_53932834_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ENSMUST00000169870.8	chr15	+	2396	10	FSM	ENSMUSG00000015363.14	ENSMUST00000169870.8	2396	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	29.0546526309673	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCCCGCTTTGTGAAGT	NA	False	NA	3	True	AATAAA	-13	NA	88960274	88971274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_88960345_88965182_88965248_88965555_88965657_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
ENSMUST00000169938.8	chr12	+	4356	21	FSM	ENSMUSG00000021111.16	ENSMUST00000169938.8	4356	21	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	426.918657357581	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105751001	105805203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ENSMUST00000170000.4	chr9	-	1773	5	FSM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_3	15.188400179084	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTGTCTCTTTATTTT	NA	False	NA	-4	True	ATTAAA	-12	NA	48406597	48400000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48406454
ENSMUST00000170002.8	chr12	+	2605	21	FSM	ENSMUSG00000021111.16	ENSMUST00000170002.8	2605	21	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_19	453.97952597006	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAATTAGAAAGT	NA	False	NA	NA	False	AATACA	-45	NA	105751130	105803532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105803023
ENSMUST00000170010.3	chr19	-	758	3	FSM	ENSMUSG00000024844.16	ENSMUST00000170010.3	758	3	0	0	0	0	multi-exon	FALSE	canonical	3	1351	junction_2	2345.5	13791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGGTGTTCTGTGTCA	8986	False	NA	-9	True	AATAAA	-14	NA	5416391	5414668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5415187_5415845_5415985_5416290
ENSMUST00000170068.9	chr7	+	1585	13	FSM	ENSMUSG00000015149.15	ENSMUST00000170068.9	1585	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	28.6162347084463	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTGTGTGGCCTCTG	NA	False	NA	13	True	ATTAAA	-22	NA	28466240	28488086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28466293_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341
ENSMUST00000170070.3	chr17	-	3208	22	FSM	ENSMUSG00000019214.15	ENSMUST00000170070.3	3208	22	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_21	77.5978060329916	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTGGGGAGTGTCAGT	5683	False	NA	NA	False	NA	NA	NA	25946384	25937899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ENSMUST00000170103.3	chr17	+	925	2	FSM	ENSMUSG00000090952.3	ENSMUST00000170103.3	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	2286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCTGATTTCATTTTC	3477	False	NA	19	True	NA	NA	NA	33978965	33980844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_33979562_33980515
ENSMUST00000170122.4	chr3	-	345	4	FSM	ENSMUSG00000090733.7	ENSMUST00000170122.4	345	4	0	0	0	0	multi-exon	FALSE	canonical	3	13930	junction_3	2970.01597451746	161291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTTTGTCTTGTTTAA	NA	False	NA	-6	True	AATAAA	-15	NA	90120958	90119977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120916
ENSMUST00000170134.9	chr15	-	2984	17	FSM	ENSMUSG00000022391.17	ENSMUST00000170134.9	2984	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_16	270.05335121046	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAAGCTTCTTTCATCAA	NA	False	NA	-4	True	AATAAA	-25	NA	81614102	81588448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613417_81613466_81613912
ENSMUST00000170142.8	chr6	-	2133	10	FSM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	6.09998988058258	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAGTTGGCTGTTCTAT	8766	False	NA	-2	True	ATTAAA	-16	NA	50238749	50184382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_50185187_50193329_50193404_50196216_50196419_50197968_50198097_50199715_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255_50228494_50238713
ENSMUST00000170217.8	chr1	-	2036	18	FSM	ENSMUSG00000026245.17	ENSMUST00000170217.8	2036	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	335.563627493931	3796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATGGCTCTGCTACTAT	NA	False	NA	NA	False	AATAAA	-18	NA	78465496	78394611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_78394860_78401829_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ENSMUST00000170241.8	chr4	+	1079	5	FSM	ENSMUSG00000028478.19	ENSMUST00000170241.8	1079	5	0	0	0	0	multi-exon	FALSE	canonical	3	1242	junction_1	75.1631558677521	3855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGAAGCATCTTTAAT	8196	False	NA	20	True	AATAAA	-20	NA	44012642	44032845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
ENSMUST00000170263.9	chr8	+	2096	6	FSM	ENSMUSG00000031562.17	ENSMUST00000170263.10	2096	6	0	0	0	0	multi-exon	TRUE	canonical	3	319	junction_1	42.4480859403578	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	10	True	ATTAAA	-16	NA	48562992	48594700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ENSMUST00000170281.2	chr15	+	741	2	FSM	ENSMUSG00000001285.13	ENSMUST00000170281.2	741	2	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCAGGATCCCCTGGAAT	5938	False	NA	NA	False	NA	NA	NA	102240154	102241031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102240389_102240524
ENSMUST00000170300.8	chr1	+	3942	23	FSM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_20	86.0654661453124	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCTCCTGACTGTGT	9370	False	NA	14	True	AATAAA	-15	NA	87603960	87648224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ENSMUST00000170303.2	chr11	-	991	8	FSM	ENSMUSG00000091228.2	ENSMUST00000170303.2	991	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	2495.73089372183	37411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTGCAGTGTTCAGT	613	False	NA	-33	True	NA	NA	NA	93859119	93840644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93846451_93851493_93851607_93854052_93854155_93856633_93856764_93859046
ENSMUST00000170308.8	chr9	+	429	4	FSM	ENSMUSG00000007656.14	ENSMUST00000170308.8	429	4	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	2500.61556865949	10749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATTTCTCTGACTACG	NA	False	NA	42	True	ATTAAA	-29	NA	74944958	74964120	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_74945006_74945188_74945244_74959514_74959638_74963916
ENSMUST00000170331.8	chr14	-	777	4	FSM	ENSMUSG00000013701.14	ENSMUST00000170331.8	777	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	1998.03753718492	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCTCCAAATTCAGGCCA	NA	False	NA	NA	False	NA	NA	NA	31923826	31902247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_31902628_31911100_31911212_31920925_31920985_31923599
ENSMUST00000170335.4	chr18	-	965	1	FSM	ENSMUSG00000091957.4	ENSMUST00000170335.4	965	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85994	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGACCTGCAGAGATGG	7423	False	NA	NA	False	NA	NA	NA	61393043	61392078	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_61392100_61393000
ENSMUST00000170338.3	chr1	-	447	1	FSM	ENSMUSG00000099471.2	ENSMUST00000170338.3	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5728	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCACACCGGAGGTTAAT	NA	False	NA	NA	False	NA	NA	NA	127210845	127210398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_127210400_127210800
ENSMUST00000170350.8	chr6	-	3590	24	FSM	ENSMUSG00000012535.15	ENSMUST00000170350.8	3590	24	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_23	180.197874854504	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAGGAAAGCTGA	31	False	NA	NA	False	AAAAAG	-9	NA	29609810	29541569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29599538_29599698_29609364
ENSMUST00000170377.8	chr3	+	2573	6	FSM	ENSMUSG00000028057.15	ENSMUST00000170377.8	2573	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	25.7868183380579	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGGTGTCAGATTTTT	2273	False	NA	NA	False	AATACA	-9	NA	88624200	88638348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633487_88633586_88633779_88636418
ENSMUST00000170382.5	chr6	-	494	5	FSM	ENSMUSG00000091625.9	ENSMUST00000170382.5	494	5	0	0	0	0	multi-exon	TRUE	canonical	3	1056	junction_2	222.021395365402	10117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGATTTGATTTATTATG	NA	False	NA	NA	False	AATAAA	-16	NA	56681677	56678047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_56678275_56679080_56679154_56679990_56680019_56680298_56680395_56681607
ENSMUST00000170468.8	chr5	-	1510	6	FSM	ENSMUSG00000029507.17	ENSMUST00000170468.8	1510	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	177.715052823333	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGCCTATTTTCCTT	NA	False	NA	0	True	ATTAAA	-21	NA	110928481	110921533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928427
ENSMUST00000170491.8	chr17	-	2433	6	FSM	ENSMUSG00000024327.17	ENSMUST00000170491.8	2433	6	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_4	31.8282893036996	1566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGCCTTTGTCTTTA	NA	False	NA	-6	True	AATAAA	-22	NA	34250622	34247246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539
ENSMUST00000170496.6	chr5	+	2602	11	FSM	ENSMUSG00000054099.12	ENSMUST00000170496.6	2602	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	12.7342059037853	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTTGTTTTACATTAC	NA	False	NA	NA	False	AATAAA	-19	NA	8472898	8504736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_8473040_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ENSMUST00000170629.3	chr15	+	2641	12	FSM	ENSMUSG00000022385.12	ENSMUST00000170629.3	2641	12	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_1	58.9672832668062	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTATAAAGTTTATTAAA	7137	False	NA	-13	True	ATTAAA	-18	NA	85743945	85760731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
ENSMUST00000170647.2	chr6	-	1664	8	FSM	ENSMUSG00000012535.15	ENSMUST00000170647.2	1664	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	239.492916686187	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTAAAAAAAAAAAAAAAGTG	15	False	NA	NA	False	NA	NA	NA	29560093	29540980	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554980_29555151_29555309_29556976_29557072_29558750_29558868_29560080
ENSMUST00000170667.8	chr6	-	1990	11	FSM	ENSMUSG00000035378.18	ENSMUST00000170667.8	1990	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.1530201939083	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGGTGTAAATAATTAGA	NA	False	NA	-2	True	AATAAA	-18	NA	100648118	100550042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ENSMUST00000170693.9	chr18	+	2480	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTCTCATCTCTCA	NA	False	NA	17	True	AATAAA	-28	NA	35904610	35940221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
ENSMUST00000170705.8	chr8	+	1634	8	FSM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_1	317.681974204855	3444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTAATGCTTTGTT	5025	False	NA	9	True	AATAAA	-13	NA	34221860	34267192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ENSMUST00000170715.8	chr17	+	998	6	FSM	ENSMUSG00000044533.16	ENSMUST00000170715.8	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	3280	junction_1	2855.80020309545	84159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATGTTTTTTTTTGTCTG	6190	False	NA	1	True	AATAAA	-20	NA	24939036	24940900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24939107_24939246_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
ENSMUST00000170744.2	chr2	+	2776	7	FSM	ENSMUSG00000028640.12	ENSMUST00000170744.2	2776	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	218.277091992927	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGGTTCTGACCCTT	NA	False	NA	22	True	AATAAA	-24	NA	172392910	172400539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_172393142_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ENSMUST00000170788.9	chr3	+	1730	7	FSM	ENSMUSG00000027777.16	ENSMUST00000170788.9	1730	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	136.891684675634	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCCTTTTGCTCACTAA	NA	False	NA	22	True	AATAAA	-24	NA	68479577	68533797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_68479997_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUST00000170795.3	chr10	+	6427	29	FSM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	51.5606810130608	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	NA	False	NA	12	True	AATAAA	-18	NA	76304760	76351691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ENSMUST00000170805.9	chr16	+	1520	8	FSM	ENSMUSG00000022871.14	ENSMUST00000170805.9	1520	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	163.600059877241	1953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACTGGAAATGAGACTAA	NA	False	NA	35	True	AATAAA	-41	NA	22737131	22758528	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22737341_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ENSMUST00000170810.8	chr10	-	1341	8	FSM	ENSMUSG00000061904.13	ENSMUST00000170810.8	1341	8	0	0	0	0	multi-exon	FALSE	canonical	1	85	junction_6	1787.71823557179	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTATGAGTTTGTTATT	NA	False	NA	-5	True	AATAAA	-15	NA	90959865	90952653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90958068_90958194_90959419_90959569_90959777
ENSMUST00000170811.8	chr18	+	2886	8	FSM	ENSMUSG00000060450.15	ENSMUST00000170811.8	2886	8	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	44.1310663864829	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGACACGGTGTCCTGT	926	False	NA	21	True	AATAAA	-26	NA	38429687	38450900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUST00000170828.2	chrX	+	452	5	FSM	ENSMUSG00000079435.10	ENSMUST00000170828.2	452	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	5056.48450012457	147737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTCCTGTTGAGTGG	NA	False	NA	81	True	ATTAAA	-22	NA	133486438	133488811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133486469_133486826_133486933_133487260_133487328_133488199_133488323_133488685
ENSMUST00000170833.2	chr6	-	2792	18	FSM	ENSMUSG00000000628.11	ENSMUST00000170833.2	2792	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	135.017184604066	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGGAGCAGACGGGAC	9816	False	NA	NA	False	NA	NA	NA	82750344	82704290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750243
ENSMUST00000170836.4	chr13	+	2911	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	0	0	0	0	multi-exon	FALSE	canonical	3	4380	junction_5	234.832723791352	20596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGAGTGGTGGTTGC	NA	False	NA	7	True	ATTAAA	-18	NA	14787824	14802221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUST00000170862.8	chr18	+	2259	11	FSM	ENSMUSG00000024576.15	ENSMUST00000170862.8	2259	11	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_5	708.334701959462	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTTGCTTAGATAA	493	False	NA	-31	True	NA	NA	NA	61688409	61721253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ENSMUST00000170883.8	chr1	-	6231	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATGGGACTCAT	NA	False	NA	-10	True	AATAAA	-14	NA	93406523	93333661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ENSMUST00000170908.8	chr2	+	1342	5	FSM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	15.4495145554804	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCGCCCTTACCTTTCG	7279	False	NA	25	True	ATTAAA	-23	NA	125994060	126007196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689_126001949_126006646
ENSMUST00000170953.3	chr7	-	589	6	FSM	ENSMUSG00000090862.4	ENSMUST00000170953.3	589	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	4075.24362952695	168638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTGGTTCTTTCTGC	NA	False	NA	0	True	AATAAA	-20	NA	115933430	115930739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_115930819_115931613_115931715_115932163_115932334_115932930_115933010_115933134_115933184_115933319
ENSMUST00000171040.2	chr12	+	731	8	FSM	ENSMUSG00000021243.15	ENSMUST00000171040.2	731	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	770.463443887734	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAATGCTATGTTG	4713	False	NA	11	True	ATTAAA	-13	NA	85017754	85030065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_85017818_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ENSMUST00000171080.8	chr11	-	2844	2	FSM	ENSMUSG00000035455.13	ENSMUST00000171080.8	2844	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTGTAGTCTGTTTG	NA	False	NA	79	True	TTTAAA	-38	NA	11758962	11750287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_11753064_11758894
ENSMUST00000171121.9	chr17	-	1710	9	FSM	ENSMUSG00000015474.17	ENSMUST00000171121.9	1710	9	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_2	7.8700381193486	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTTGGCTTATTCCCA	3930	False	NA	0	True	AATAAA	-17	NA	34846409	34835635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846298
ENSMUST00000171140.8	chr15	-	1416	10	FSM	ENSMUSG00000022617.16	ENSMUST00000171140.8	1416	10	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_9	49.0736408087093	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1640	False	NA	NA	False	AATAAA	-23	NA	89313642	89310569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
ENSMUST00000171151.9	chr10	+	837	6	FSM	ENSMUSG00000020056.17	ENSMUST00000171151.9	837	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	153.628903530553	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTTTCTGATTCTTTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	88037032	88061224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88060893
ENSMUST00000171155.4	chr7	+	3403	3	FSM	ENSMUSG00000055652.15	ENSMUST00000171155.4	3403	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTGGGTTCTGATTC	NA	False	NA	17	True	AATAAA	-18	NA	75498057	75523879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_75498222_75515084_75516890_75522445
ENSMUST00000171158.8	chr12	+	2311	6	FSM	ENSMUSG00000020592.15	ENSMUST00000171158.8	2311	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	93.6640806285953	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCTATGAACTCTACTG	NA	False	NA	5	True	AATAAA	-14	NA	8821412	8843062	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_8821702_8839406_8839489_8840384_8840867_8841290_8841427_8841637_8842568_8842670
ENSMUST00000171172.3	chr17	-	1272	3	FSM	ENSMUSG00000034509.10	ENSMUST00000171172.3	1272	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	3.5	546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGATTTAGACTTTT	NA	False	NA	-2	True	AATAAA	-21	NA	46464479	46458312	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46459211_46463704_46463968_46464368
ENSMUST00000171183.2	chr7	-	883	2	FSM	ENSMUSG00000045948.9	ENSMUST00000171183.2	883	2	0	0	0	0	multi-exon	FALSE	canonical	3	939	junction_1	0	3689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1694	False	NA	-5	True	AATAAA	-24	NA	28441195	28439065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28439665_28440911
ENSMUST00000171191.6	chr3	+	1437	15	FSM	ENSMUSG00000028109.15	ENSMUST00000171191.6	1437	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_14	86.2158243441826	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTCTAATTCATTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	95466988	95493109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95492845
ENSMUST00000171229.8	chr13	-	1426	10	FSM	ENSMUSG00000021417.16	ENSMUST00000171229.8	1426	10	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_9	38.39206450927	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	35178127	35161730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177996
ENSMUST00000171245.8	chr15	+	1353	4	FSM	ENSMUSG00000023048.14	ENSMUST00000171245.8	1353	4	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	222.770933671538	1664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTGTGCCATTACCTT	2435	False	NA	18	True	AATAAA	-21	NA	102367666	102371219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102368017_102368542_102368582_102368804_102369155_102370605
ENSMUST00000171247.8	chr11	+	1867	11	FSM	ENSMUSG00000059552.14	ENSMUST00000171247.8	1867	11	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_10	535.886405873484	4834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471184	69482698	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
ENSMUST00000171249.6	chr3	-	1110	8	FSM	ENSMUSG00000028100.12	ENSMUST00000171249.6	1110	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	6.53405521487387	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTTTTTTTTTAAGTG	NA	False	NA	-2	True	AATAAA	-13	NA	96615878	96613384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615099_96615126_96615307_96615492_96615643
ENSMUST00000171280.3	chr7	+	571	3	FSM	ENSMUSG00000074365.14	ENSMUST00000171280.3	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_1	106.5	5367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTGCTTTAAAAGAAAAT	NA	False	NA	-11	True	AATAAA	-24	NA	15635570	15637945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_15635663_15636774_15636933_15637624
ENSMUST00000171284.3	chr17	-	2560	8	FSM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	27.8948462799061	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTATAGTGAGTCTCT	NA	False	NA	NA	False	AATATA	-16	NA	95057447	95034512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056813
ENSMUST00000171325.9	chr16	+	1792	8	FSM	ENSMUSG00000022800.15	ENSMUST00000171325.9	1792	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	273.034198351393	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAGTGTCTGTAGATTC	NA	False	NA	36	True	AATAAA	-43	NA	32698158	32726835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718770_32718841_32719247_32719310_32722788_32722916_32725901
ENSMUST00000171423.9	chr19	-	1573	14	FSM	ENSMUSG00000024659.16	ENSMUST00000171423.9	1573	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.07627116303012	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGTGTCATTGTCTC	7188	False	NA	0	True	AATAAA	-21	NA	20368125	20350793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_20351135_20352588_20352712_20353825_20353910_20354015_20354075_20354970_20355067_20355759_20355854_20357012_20357070_20357703_20357784_20359413_20359505_20360225_20360340_20361120_20361216_20361838_20361948_20362056_20362137_20367975
ENSMUST00000171460.8	chr15	+	1719	9	FSM	ENSMUSG00000036106.16	ENSMUST00000171460.8	1719	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.5302937604856	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTCTGCCCCCTGGTG	NA	False	NA	5	True	AATAAA	-15	NA	84553820	84587874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_84553907_84565400_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
ENSMUST00000171462.8	chr9	-	3339	7	FSM	ENSMUSG00000059820.15	ENSMUST00000171462.8	3339	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	47.355921840181	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGCTCTGTTACTTT	NA	False	NA	-7	True	AATAAA	-13	NA	50528764	50516543	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957_50527985_50528527
ENSMUST00000171518.8	chr13	-	2300	4	FSM	ENSMUSG00000071291.11	ENSMUST00000171518.8	2300	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	12.657891697365	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTTGGTCATGCCAT	NA	False	NA	0	True	NA	NA	NA	67648622	67638285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67648529
ENSMUST00000171549.9	chr6	-	2226	16	FSM	ENSMUSG00000004266.16	ENSMUST00000171549.9	2226	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_15	37.1732281203676	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGTGCCCCTTGTATC	8920	False	NA	0	True	AATAAA	-28	NA	124715677	124697669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124715461
ENSMUST00000171564.8	chr10	-	2962	22	FSM	ENSMUSG00000040354.15	ENSMUST00000171564.8	2962	22	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	467.860135698655	2540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCTCCTGGTCTACCC	NA	False	NA	-7	True	AATAAA	-26	NA	127147655	127132090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_127132310_127132409_127132503_127132585_127132610_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ENSMUST00000171597.2	chr1	+	2098	6	FSM	ENSMUSG00000026036.18	ENSMUST00000171597.2	2098	6	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_2	29.7119504576862	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGACACACTGTAT	NA	False	NA	13	True	NA	NA	NA	58486789	58501425	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ENSMUST00000171632.2	chr9	-	475	1	FSM	ENSMUSG00000090516.2	ENSMUST00000171632.2	475	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGACTCTGGCCAATGCCC	NA	False	NA	NA	False	NA	NA	NA	59379516	59379041	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_59379000_59379500
ENSMUST00000171649.8	chr19	+	1962	12	FSM	ENSMUSG00000071657.13	ENSMUST00000171649.8	1962	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	50.3060057535483	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGAGGACATATTTTAGAG	NA	False	NA	30	True	AATAAA	-30	NA	8814830	8826047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8815229_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ENSMUST00000171683.3	chr14	-	1892	10	FSM	ENSMUSG00000021982.15	ENSMUST00000171683.3	1892	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	37.821543276319	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGCTTCATAGTGTATA	NA	False	NA	NA	False	AATAAA	-29	NA	59835393	59805177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_59805488_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ENSMUST00000171687.8	chr16	+	2667	9	FSM	ENSMUSG00000002845.15	ENSMUST00000171687.8	2667	9	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_5	275.38779475496	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCTATTTGTGAGCAT	NA	False	NA	4	True	AATAAA	-15	NA	38383173	38412524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUST00000171702.8	chr15	-	3052	18	FSM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_16	174.822975218819	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549524	99518376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541273_99541405_99549387
ENSMUST00000171749.3	chr7	-	3449	12	FSM	ENSMUSG00000054753.10	ENSMUST00000171749.3	3449	12	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_11	40.7771610034849	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9506	False	NA	87	True	NA	NA	NA	3219029	3204497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218840
ENSMUST00000171755.8	chr19	-	2810	26	FSM	ENSMUSG00000025159.9	ENSMUST00000171755.8	2810	26	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_10	36.2865484718511	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGTACATCTGAGCTATT	NA	False	NA	NA	False	ACTAAA	-16	NA	41969578	41935230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ENSMUST00000171795.9	chr17	-	2734	15	FSM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_9	21.6455679584736	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTTTGTGTAATTTTG	NA	False	NA	-3	True	TTTAAA	-4	NA	85397652	85371957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
ENSMUST00000171808.8	chr5	-	2402	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_3	47.2513937876549	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTGAGAATAAAAATGAA	NA	False	NA	NA	False	AATAAA	-22	NA	8472716	8447010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ENSMUST00000171847.8	chr17	-	2033	13	FSM	ENSMUSG00000023942.16	ENSMUST00000171847.8	2033	13	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_12	693.627476668052	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	-1	True	AATAAA	-18	NA	45910529	45896125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45910398
ENSMUST00000171938.2	chr11	-	2974	3	FSM	ENSMUSG00000035455.13	ENSMUST00000171938.2	2974	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	284.5	1822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTGTAGTCTGTTTG	NA	False	NA	79	True	TTTAAA	-38	NA	11758962	11750287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_11753064_11756095_11756216_11758884
ENSMUST00000172023.8	chrX	+	812	4	FSM	ENSMUSG00000079435.10	ENSMUST00000172023.8	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	10431	junction_3	1438.31622237794	85613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTCCTGTTGAGTGG	NA	False	NA	81	True	ATTAAA	-22	NA	133486437	133488811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_133486933_133487259_133487328_133488199_133488323_133488685
ENSMUST00000172070.8	chr10	-	2153	3	FSM	ENSMUSG00000020027.19	ENSMUST00000172070.8	2153	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	233.5	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGAGTTGTAGGTGTA	NA	False	NA	2	True	AATAAA	-32	NA	95251346	95247351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_95248973_95250692_95251054_95251175
ENSMUST00000172079.2	chr1	-	653	4	FSM	ENSMUSG00000090553.9	ENSMUST00000172079.2	653	4	0	0	0	0	multi-exon	FALSE	canonical	3	3763	junction_3	471.411356107027	2780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAAGTTTTTGTTAAAA	NA	False	NA	-34	True	AATAAA	-5	NA	133537785	133531633	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_133531815_133534238_133534318_133536634_133536698_133537455
ENSMUST00000172088.8	chr6	+	2812	4	FSM	ENSMUSG00000042097.18	ENSMUST00000172088.8	2812	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	8.52447456836295	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTCCAATGTGTTCATTT	NA	False	NA	12	True	TTTAAA	-6	NA	117840037	117849726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_117840104_117843355_117843536_117846178_117846235_117847216
ENSMUST00000172091.2	chr16	-	281	2	FSM	ENSMUSG00000022661.15	ENSMUST00000172091.2	281	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGAAGCCTATCCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	45229381	45227556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_45227675_45229218
ENSMUST00000172107.8	chr15	-	3346	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	0	0	0	0	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	8238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGACCTTCCCCCATTT	NA	False	NA	-19	True	AATAAA	-18	NA	81284244	81247869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ENSMUST00000172165.8	chr1	+	3192	12	FSM	ENSMUSG00000116048.2	ENSMUST00000172165.8	3192	12	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_1	279.729178354959	2820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406714	93437455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_93406791_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUST00000172175.3	chr19	+	2004	2	FSM	ENSMUSG00000071661.8	ENSMUST00000172175.3	2004	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGAACTGGTGTTGG	5428	False	NA	12	True	CATAAA	-17	NA	8779918	8782210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8780050_8780337
ENSMUST00000172184.2	chr13	-	1327	7	FSM	ENSMUSG00000052180.16	ENSMUST00000172184.2	1327	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	317.289431486984	2326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCAGAACCGAGTGTTT	NA	False	NA	-8	True	AATAAA	-18	NA	34089691	34063799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089625
ENSMUST00000172202.2	chr4	+	1527	2	FSM	ENSMUSG00000091021.2	ENSMUST00000172202.2	1527	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAGTCTCCCAGGCAAT	3476	False	NA	NA	False	ATTAAA	-17	NA	132079082	132080693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132080032_132080115
ENSMUST00000172229.8	chr17	-	1446	3	FSM	ENSMUSG00000047407.18	ENSMUST00000172229.8	1446	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	419.5	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGCATTTTCTTGAAG	NA	False	NA	84	True	AATAAA	-26	NA	71156785	71151199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_71152268_71153166_71153394_71156634
ENSMUST00000172272.8	chr13	+	5676	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCAGATTATCTTT	NA	False	NA	8	True	AATAAA	-15	NA	55782839	55829069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ENSMUST00000172282.8	chr10	+	3110	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	0	0	0	0	multi-exon	FALSE	canonical	3	966	junction_8	238.590734232364	4367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCCTGCCTGTCATTGG	1383	False	NA	23	True	AATAAA	-13	NA	79690260	79700266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUST00000172298.8	chr9	-	2336	5	FSM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	0	0	0	0	multi-exon	TRUE	canonical	3	899	junction_3	39.0160223497988	2245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGTGAGATTACATTCT	NA	False	NA	-2	True	AATAAA	-21	NA	64645040	64622580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515_64635712_64644865
ENSMUST00000172307.9	chr15	+	1544	12	FSM	ENSMUSG00000078954.10	ENSMUST00000172307.9	1544	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	58.989143138924	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGGTTTTGTGCTTCTG	NA	False	NA	12	True	ATTAAA	-19	NA	84604252	84656408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_84604329_84617091_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ENSMUST00000172362.3	chr19	-	4633	22	FSM	ENSMUSG00000024908.16	ENSMUST00000172362.3	4633	22	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	119.716123030186	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTCCTCGTGAGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	3625716	3504932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ENSMUST00000172387.8	chr15	-	1223	7	FSM	ENSMUSG00000022370.14	ENSMUST00000172387.8	1223	7	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_4	55.6070039553372	3625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	0	True	AATAAA	-20	NA	55421144	55397489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55411537_55411632_55418715_55418840_55420653
ENSMUST00000172392.2	chr11	+	491	2	FSM	ENSMUSG00000025142.19	ENSMUST00000172392.2	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	1095	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	997	False	NA	14	True	AATAAA	-18	NA	120599683	120600271	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120600073_120600169
ENSMUST00000172403.9	chr15	-	2943	17	FSM	ENSMUSG00000042632.18	ENSMUST00000172403.9	2943	17	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_16	62.696565894792	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTCATTGTACAGTGT	NA	False	NA	-14	True	AATAAA	-12	NA	79212453	79170431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211915_79212409
ENSMUST00000172405.8	chr11	-	2950	14	FSM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_13	140.403560365518	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTCTTCCTTCCTCA	NA	False	NA	0	True	AATAAA	-16	NA	84761564	84723186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761463
ENSMUST00000172412.2	chr14	+	1760	5	FSM	ENSMUSG00000091110.2	ENSMUST00000172412.2	1760	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	8.31790237980706	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAATATAAAAGCTGGT	NA	False	NA	NA	False	AATAAA	-11	NA	41000761	41010772	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_41000918_41001646_41001810_41002809_41002942_41003619_41003802_41009645
ENSMUST00000172422.8	chr2	+	1534	14	FSM	ENSMUSG00000000194.14	ENSMUST00000172422.8	1534	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	124.164616823819	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTCTTTTTTTTTTT	NA	False	NA	NA	False	ACTAAA	-16	NA	31042362	31082125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_31042494_31057032_31057154_31058173_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858
ENSMUST00000172429.8	chr17	-	1878	4	FSM	ENSMUSG00000038500.16	ENSMUST00000172429.8	1878	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	20.5101600838869	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTCTCATTTCTCTG	NA	False	NA	-1	True	AATAAA	-16	NA	36289863	36283432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602
ENSMUST00000172455.3	chr17	+	1544	5	FSM	ENSMUSG00000073423.11	ENSMUST00000172455.3	1544	5	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	35.2233942146409	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACATGATTTTTACCT	4928	False	NA	3	True	NA	NA	NA	33848074	33850664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549_33850438_33850515
ENSMUST00000172459.8	chr6	+	2922	24	FSM	ENSMUSG00000023403.15	ENSMUST00000172459.8	2922	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	67.4778406531066	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACAAATTAATCCTTTAT	204	False	NA	NA	False	AAGAAA	-20	NA	49372568	49446286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402711_49414376_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ENSMUST00000172501.8	chr17	-	579	5	FSM	ENSMUSG00000092203.8	ENSMUST00000172501.8	579	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	37.0497975702972	5266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTAAATAGACTTTTTCT	6010	False	NA	NA	False	AATAAA	-14	NA	35171444	35169218	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35169452_35169673_35169824_35170860_35170902_35171111_35171150_35171327
ENSMUST00000172503.3	chr17	+	1744	7	FSM	ENSMUSG00000073411.13	ENSMUST00000172503.3	1744	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	18.315900802915	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTGAAAGTGACCTTGA	2085	False	NA	NA	False	NA	NA	NA	35482071	35486329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485442_35485491_35485663
ENSMUST00000172518.8	chr17	-	710	5	FSM	ENSMUSG00000036315.14	ENSMUST00000172518.8	710	5	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_4	61.4532342517463	3754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGATGTTATGTGTG	NA	False	NA	-13	True	ACTAAA	-15	NA	37269425	37265249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040_37269189_37269269
ENSMUST00000172557.2	chr14	+	700	7	FSM	ENSMUSG00000022194.16	ENSMUST00000172557.2	700	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	922.719651657834	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAAGATGACCTTGAT	NA	False	NA	-1	True	NA	NA	NA	55132074	55135591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55132127_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ENSMUST00000172571.8	chr17	+	3599	23	FSM	ENSMUSG00000024392.18	ENSMUST00000172571.8	3599	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	266.293354829681	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTGCCTAGTAGTTTC	8515	False	NA	16	True	AATAAA	-17	NA	35354180	35366282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359448_35359794_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ENSMUST00000172579.4	chr13	-	2587	4	FSM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	43.8254111979188	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGACTTTGCAACCTGC	NA	False	NA	NA	False	NA	NA	NA	66589139	66577950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_66580291_66581478_66581540_66581739_66581867_66589080
ENSMUST00000172594.2	chr7	-	648	3	FSM	ENSMUSG00000019370.11	ENSMUST00000172594.2	648	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1148	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAATAAAATACAGTGACTA	6408	False	NA	-36	True	AATATA	-13	NA	16651090	16649325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_16649604_16650622_16650902_16650999
ENSMUST00000172639.8	chr17	-	690	3	FSM	ENSMUSG00000073413.10	ENSMUST00000172639.8	690	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	7	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGTAAGAAGACAAACACT	NA	False	NA	NA	False	NA	NA	NA	35297041	35290452	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35290736_35293150_35293289_35296772
ENSMUST00000172688.4	chr13	-	526	2	FSM	ENSMUSG00000074832.12	ENSMUST00000172688.4	526	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCCTCGGTTCATAAA	NA	False	NA	NA	False	AATAAA	-36	NA	66567656	66566380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_66566880_66567629
ENSMUST00000172709.8	chrX	-	3783	7	FSM	ENSMUSG00000057836.13	ENSMUST00000172709.8	3783	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	560.301406982587	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140629	72129898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72136911_72137788_72137859_72138551_72138689_72140586
ENSMUST00000172732.8	chr5	-	4699	25	FSM	ENSMUSG00000029191.17	ENSMUST00000172732.8	4699	25	0	0	0	0	multi-exon	TRUE	canonical	3	281	junction_12	79.0184138174275	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	-17	True	NA	-4	True	AATAAA	-19	NA	65492964	65419194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ENSMUST00000172733.2	chr17	-	4488	9	FSM	ENSMUSG00000024083.17	ENSMUST00000172733.2	4488	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	42.6614580154031	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCATTTCTAATATTTAA	NA	False	NA	-18	True	AATAAA	-15	NA	64638860	64588014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ENSMUST00000172746.8	chr7	-	1644	6	FSM	ENSMUSG00000092490.8	ENSMUST00000172746.8	1644	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	15.6332977966902	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACCTTTTCAAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	8865850	8858845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_8859771_8860940_8861028_8861801_8861928_8863073_8863113_8865069_8865260_8865573
ENSMUST00000172747.8	chr4	-	1405	9	FSM	ENSMUSG00000028744.16	ENSMUST00000172747.8	1405	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	44.5112345369121	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGCCTGTTTCTGCTGC	NA	False	NA	-5	True	AGTAAA	-13	NA	139037976	139025840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139033920_139035039_139035162_139037939
ENSMUST00000172748.8	chr15	+	3368	17	FSM	ENSMUSG00000022394.15	ENSMUST00000172748.8	3368	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_16	166.366864470513	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGATATCAGATGAGT	NA	False	NA	17	True	AATAAA	-24	NA	81548156	81572516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571192
ENSMUST00000172767.9	chr17	-	1398	5	FSM	ENSMUSG00000079557.12	ENSMUST00000172767.9	1398	5	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	25.5196003103497	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTTTCTAAGCTGTTC	2676	False	NA	-11	True	AATAAA	-33	NA	33937644	33910488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33911128_33915010_33915221_33921986_33922183_33928718_33928947_33937519
ENSMUST00000172809.2	chr11	+	2000	14	FSM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	255.452956564905	3113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1634	False	NA	2	True	ATTAAA	-19	NA	120675340	120679928	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUST00000172817.2	chr17	+	807	3	FSM	ENSMUSG00000092349.2	ENSMUST00000172817.2	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	58	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGTGTTCTGACTTAAAT	1259	False	NA	13	True	NA	NA	NA	34124108	34125649	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34124169_34124501_34124892_34125292
ENSMUST00000172818.8	chr17	-	4740	10	FSM	ENSMUSG00000024083.17	ENSMUST00000172818.8	4740	10	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_6	24	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTGTGTGACCCTATC	NA	False	NA	-3	True	AATAAA	-30	NA	64638911	64587999	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ENSMUST00000172820.2	chr10	-	574	2	FSM	ENSMUSG00000001666.9	ENSMUST00000172820.2	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_1	0	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTCTTTGCTTCTGT	NA	False	NA	-4	True	AATAAA	-21	NA	75608868	75607063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_75607341_75608571
ENSMUST00000172834.2	chr12	-	801	6	FSM	ENSMUSG00000062352.16	ENSMUST00000172834.2	801	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	20.9818969590454	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAGACAGGCTATGAGA	NA	False	NA	NA	False	AATAAA	-16	NA	21336186	21321288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21336106
ENSMUST00000172890.8	chr17	+	687	5	FSM	ENSMUSG00000007050.18	ENSMUST00000172890.8	687	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	715.149285114653	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTGGTTTGTCGTCTG	273	False	NA	24	True	AATAAA	-18	NA	35201134	35204865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35201211_35201616_35201664_35204084_35204116_35204224_35204285_35204392
ENSMUST00000172912.8	chr17	-	1570	8	FSM	ENSMUSG00000061232.17	ENSMUST00000172912.8	1570	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	28.0698836361489	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTATGCTGTGTGTATCTG	NA	False	NA	-4	True	AATAAA	-32	NA	34219263	34214990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34215451_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ENSMUST00000172914.2	chr19	+	1089	4	FSM	ENSMUSG00000024856.11	ENSMUST00000172914.2	1089	4	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_1	272.960721635102	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTGTGTGTGGTTCC	7095	False	NA	36	True	AATAAA	-25	NA	4147400	4149019	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4147734_4147816_4147918_4148004_4148138_4148497
ENSMUST00000172974.8	chr6	+	3063	6	FSM	ENSMUSG00000029767.17	ENSMUST00000172974.8	3063	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	338.701638614282	1461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTATGTGTCTTTTATT	NA	False	NA	115	True	AATAAA	-19	NA	29348067	29376671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29374397
ENSMUST00000172982.2	chr6	-	274	3	FSM	ENSMUSG00000057103.12	ENSMUST00000172982.2	274	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAGATTCTAATGCATG	9885	False	NA	NA	False	NA	NA	NA	85892648	85887143	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_85887260_85887977_85888003_85892515
ENSMUST00000172996.2	chr9	+	3800	27	FSM	ENSMUSG00000032187.17	ENSMUST00000172996.2	3800	27	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_26	213.529275461914	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGATGAAGAAGATCGT	173	False	NA	NA	False	NA	NA	NA	21547062	21597524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589248_21589348_21589611_21589690_21590224_21590444_21597308
ENSMUST00000173004.2	chr17	+	870	6	FSM	ENSMUSG00000007050.18	ENSMUST00000173004.2	870	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	799.20720717471	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTGGTTTGTCGTCTG	273	False	NA	24	True	AATAAA	-18	NA	35201134	35204865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35201344_35201595_35201664_35203955_35203985_35204084_35204116_35204224_35204285_35204392
ENSMUST00000173033.8	chr17	+	2588	11	FSM	ENSMUSG00000064120.15	ENSMUST00000173033.8	2588	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_10	9.4387499172295	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGGGGACTCTTGTCTG	NA	False	NA	9	True	AATAAA	-25	NA	49735437	49762463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_49735593_49740197_49740325_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49759822_49759871_49761057
ENSMUST00000173037.8	chr3	+	3578	14	FSM	ENSMUSG00000007379.16	ENSMUST00000173037.8	3578	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	71.904193325226	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	4649	False	NA	NA	False	GATAAA	-9	NA	103048283	103077047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_103048472_103053827_103053877_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ENSMUST00000173070.8	chr17	-	434	4	FSM	ENSMUSG00000092203.8	ENSMUST00000173070.8	434	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	32.4995726467629	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATAGACTTTTTCTGT	6007	False	NA	NA	False	AATAAA	-16	NA	35171447	35169216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35169452_35170860_35170902_35171111_35171150_35171327
ENSMUST00000173080.10	chr17	-	1138	6	FSM	ENSMUSG00000073406.11	ENSMUST00000173080.10	1138	6	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	160.992670640623	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGGTTGATTAGTGGAG	NA	False	NA	-79	True	NA	NA	NA	36395115	36391080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394858_36395051
ENSMUST00000173084.8	chr17	-	1286	8	FSM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_7	2152.45295286232	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTTTGTTGCATT	4747	False	NA	NA	False	AATAAA	-9	NA	25492357	25480894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491740_25492294
ENSMUST00000173114.8	chr17	-	917	7	FSM	ENSMUSG00000024387.14	ENSMUST00000173114.8	917	7	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_6	341.027369380621	2759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTCCTACTGTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	35340405	35335171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340286
ENSMUST00000173132.8	chr17	+	438	3	FSM	ENSMUSG00000041881.14	ENSMUST00000173132.8	438	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	4049.5	5442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAATCTGTCTTTTCTT	4106	False	NA	25	True	AATATA	-16	NA	34043577	34057283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34043655_34048640_34048791_34057072
ENSMUST00000173154.8	chr4	+	2773	25	FSM	ENSMUSG00000017264.17	ENSMUST00000173154.8	2773	25	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_23	124.10724948608	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAAGAAAGATGGTTCT	NA	False	NA	NA	False	ATTAAA	-11	NA	148642887	148666847	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666218_148666292_148666740
ENSMUST00000173158.8	chr13	-	1415	8	FSM	ENSMUSG00000021519.12	ENSMUST00000173158.8	1415	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	120.714539306581	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTTTCTGGTTT	398	False	NA	NA	False	AATAAA	-10	NA	67081131	67060189	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076352_67077948_67078288_67080998
ENSMUST00000173168.8	chr8	+	6073	10	FSM	ENSMUSG00000031976.15	ENSMUST00000173168.8	6073	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	56.6139188050884	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTATTCTGCTGGGTA	NA	False	NA	20	True	AATAAA	-24	NA	124748246	124775243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761915_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ENSMUST00000173183.2	chr8	-	731	7	FSM	ENSMUSG00000015023.8	ENSMUST00000173183.2	731	7	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_3	37.1786228900426	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAATGGAATGTTAAAGT	7716	False	NA	NA	False	NA	NA	NA	111724402	111707104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ENSMUST00000173206.8	chr3	+	4879	18	FSM	ENSMUSG00000007379.16	ENSMUST00000173206.8	4879	18	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_4	64.3554145131754	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCACATAAGATGTGTAG	NA	False	NA	NA	False	TTTAAA	-36	NA	103009919	103077085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ENSMUST00000173211.8	chr17	-	618	4	FSM	ENSMUSG00000036185.10	ENSMUST00000173211.8	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	4.54606056566195	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGGTTTGGCTCCTGT	NA	False	NA	NA	False	AATAAA	-35	NA	35246635	35244934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35245124_35245313_35245434_35245669_35245763_35246419
ENSMUST00000173253.2	chr17	-	979	3	FSM	ENSMUSG00000001525.11	ENSMUST00000173253.2	979	3	0	0	0	0	multi-exon	FALSE	canonical	3	8733	junction_1	24	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTCCGTTTCCCGGGC	NA	False	NA	NA	False	NA	NA	NA	36147952	36146496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36146932_36147054_36147166_36147519
ENSMUST00000173323.2	chr17	-	448	2	FSM	ENSMUSG00000008668.16	ENSMUST00000173323.2	448	2	0	0	0	0	multi-exon	FALSE	canonical	3	23355	junction_1	0	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACCTCCGTCTCAGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	34171515	34170977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34171287_34171376
ENSMUST00000173347.8	chr11	+	3631	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173347.8	3631	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.9559583885031	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTATGTGGCAAGACCT	NA	False	NA	20	True	TTTAAA	-16	NA	82672018	82692851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ENSMUST00000173357.8	chr17	+	1399	11	FSM	ENSMUSG00000024369.17	ENSMUST00000173357.8	1399	11	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	84.0802592764794	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTCCGTCAGCCTCTAG	-6	True	NA	30	True	AGTAAA	-20	NA	35069373	35075230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ENSMUST00000173363.8	chr17	-	871	3	FSM	ENSMUSG00000024309.16	ENSMUST00000173363.8	871	3	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_1	61	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCCTACTTTACAGCCA	NA	False	NA	-19	True	AATAAA	-13	NA	34159278	34157896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34158086_34158512_34158638_34158721
ENSMUST00000173397.8	chr9	+	3510	21	FSM	ENSMUSG00000033335.18	ENSMUST00000173397.8	3510	21	0	0	0	0	multi-exon	FALSE	canonical	2	185	junction_20	132.122244531343	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTGTGTGGGCCTTTT	5866	False	NA	18	True	AATAAA	-28	NA	21336227	21418434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
ENSMUST00000173480.8	chr17	-	372	3	FSM	ENSMUSG00000067288.14	ENSMUST00000173480.8	372	3	0	0	0	0	multi-exon	FALSE	canonical	3	11527	junction_1	5274.5	31363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTCTAGAAATTGGTT	NA	False	NA	-25	True	AATAAA	-14	NA	34043439	34042023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34042091_34042166_34042305_34043272
ENSMUST00000173482.8	chr18	-	871	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173482.8	871	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	659.109626693466	2890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCTGATGTCAGACTG	NA	False	NA	-9	True	NA	NA	NA	36803339	36800298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803314
ENSMUST00000173492.9	chr17	-	2357	11	FSM	ENSMUSG00000079553.12	ENSMUST00000173492.9	2357	11	0	0	0	0	multi-exon	FALSE	canonical	1	168	junction_4	135.039586788467	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTTTTGCTTTTTT	9693	False	NA	-7	True	AATAAA	-26	NA	34109635	34094632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ENSMUST00000173527.2	chr3	-	774	5	FSM	ENSMUSG00000092607.10	ENSMUST00000173527.2	774	5	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	26.3379479079142	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGAGATCAGTAAGGAAC	1310	False	NA	NA	False	NA	NA	NA	95041250	95037603	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95037670_95040135_95040225_95040327_95040423_95040510_95040940_95041155
ENSMUST00000173535.8	chr17	+	1722	12	FSM	ENSMUSG00000024392.18	ENSMUST00000173535.8	1722	12	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_1	126.829748576456	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGCCGCAGGTAATGACCT	8796	False	NA	NA	False	NA	NA	NA	35354461	35361571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473
ENSMUST00000173544.2	chr14	+	1986	3	FSM	ENSMUSG00000022216.18	ENSMUST00000173544.2	1986	3	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	1	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTCTTTATTGTATG	NA	False	NA	14	True	AATAAA	-18	NA	55815912	55818985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55816071_55817051_55818269_55818374
ENSMUST00000173584.8	chr17	+	4048	29	FSM	ENSMUSG00000007029.17	ENSMUST00000173584.8	4048	29	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	416.176527192145	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAGAAGCGCTCTAGA	9538	False	NA	NA	False	NA	NA	NA	35220026	35235006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569
ENSMUST00000173655.8	chr11	-	1213	8	FSM	ENSMUSG00000018727.20	ENSMUST00000173655.8	1213	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	68.8879599088851	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600346	113588997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593336_113594096_113594193_113597242_113597396_113599629_113599681_113600212
ENSMUST00000173678.3	chr17	-	685	3	FSM	ENSMUSG00000024309.16	ENSMUST00000173678.3	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	1189	junction_1	13.5	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTTTCTTGCTGT	NA	False	NA	NA	False	NA	NA	NA	34159305	34158331	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34158638_34158721_34158793_34158997
ENSMUST00000173679.8	chr11	-	2889	27	FSM	ENSMUSG00000020929.15	ENSMUST00000173679.8	2889	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	377.78382879866	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGGGGCTGGCAGCTCT	NA	False	NA	NA	False	NA	NA	NA	102768540	102729626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759449_102759920_102759997_102760993_102761073_102761845_102762012_102768435
ENSMUST00000173704.8	chr13	+	4135	19	FSM	ENSMUSG00000038518.16	ENSMUST00000173704.8	4135	19	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	182.476448674857	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTTGTACGTAGATATC	9884	False	NA	NA	False	ATTAAA	-8	NA	44884249	45073584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_44884365_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ENSMUST00000173713.8	chr17	-	890	7	FSM	ENSMUSG00000015120.16	ENSMUST00000173713.8	890	7	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_6	1745.07048568246	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGCAGCTAGTTTCTTT	3820	False	NA	NA	False	GATAAA	-19	NA	25493284	25481148	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493135
ENSMUST00000173721.8	chr7	+	655	4	FSM	ENSMUSG00000025495.16	ENSMUST00000173721.8	655	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	147.981980885061	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTTAAAAAATAAACACTT	6868	False	NA	NA	False	TATAAA	-30	NA	140711256	140723555	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140711431_140715221_140715324_140723005_140723089_140723259
ENSMUST00000173722.8	chr11	+	5797	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173722.8	5797	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.7105805272123	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTCTACCTGAGATGTT	NA	False	NA	-65	True	AAAAAG	-44	NA	82672028	82695024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ENSMUST00000173744.8	chr11	+	2257	18	FSM	ENSMUSG00000018395.20	ENSMUST00000173744.8	2257	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	25.820514362377	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGGAGAGAACTCCTT	937	False	NA	18	True	AATAAA	-15	NA	53458223	53491929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53481543_53481553_53484221_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ENSMUST00000173755.2	chr2	-	961	2	FSM	ENSMUSG00000007659.19	ENSMUST00000173755.2	961	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCCTGGCTCCCATGAC	NA	False	NA	NA	False	NA	NA	NA	152670455	152623330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_152624203_152670366
ENSMUST00000173789.2	chr17	+	783	6	FSM	ENSMUSG00000042099.17	ENSMUST00000173789.2	783	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	124.071592236096	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	NA	False	NA	12	True	AATAAA	-15	NA	34029496	34041891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34029540_34035159_34035220_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ENSMUST00000173804.8	chrX	+	3814	7	FSM	ENSMUSG00000072966.12	ENSMUST00000173804.8	3814	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	54.6669207311169	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACCCTTCTTCACTTTAA	NA	False	NA	NA	False	AATAAA	-24	NA	134739782	134745479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_134740012_134740493_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
ENSMUST00000173811.8	chr17	-	747	4	FSM	ENSMUSG00000092203.8	ENSMUST00000173811.8	747	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	36.5908306668336	1909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATAGACTTTTTCTGT	6022	False	NA	NA	False	AATAAA	-16	NA	35171432	35169216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35169452_35169673_35169824_35170860_35170902_35171111
ENSMUST00000173814.2	chr17	+	1020	3	FSM	ENSMUSG00000036214.15	ENSMUST00000173814.2	1020	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	112	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTTTGCTAATGGTACC	NA	False	NA	17	True	AATAAA	-17	NA	37269532	37276514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_37269688_37275248_37275325_37275725
ENSMUST00000173824.8	chr7	+	2912	14	FSM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_13	177.415201846273	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	False	NA	10	True	AATAAA	-20	NA	79944226	79965999	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
ENSMUST00000173844.8	chr17	-	382	4	FSM	ENSMUSG00000067288.14	ENSMUST00000173844.8	382	4	0	0	0	0	multi-exon	FALSE	canonical	3	11527	junction_1	4307.03060897722	232262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTCTAGAAATTGGTT	NA	False	NA	-25	True	AATAAA	-14	NA	34043536	34042023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34042091_34042166_34042305_34043272_34043321_34043407
ENSMUST00000173860.8	chr17	-	1544	5	FSM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	253.00296440951	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTTGGTTTTTGTTAT	NA	False	NA	-71	True	NA	NA	NA	33979280	33965723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968877_33979196
ENSMUST00000173869.8	chr17	-	1859	7	FSM	ENSMUSG00000002289.17	ENSMUST00000173869.8	1859	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	47.4812828620102	317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAACATTTTGTTCTCTG	NA	False	NA	-11	True	AATAAA	-8	NA	34000517	33993881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503_33999618_33999756_33999868_34000036
ENSMUST00000173879.8	chr17	-	342	2	FSM	ENSMUSG00000067288.14	ENSMUST00000173879.8	342	2	0	0	0	0	multi-exon	FALSE	canonical	3	22076	junction_1	0	3940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTTTTTCCAGCAGCGT	NA	False	NA	-12	True	AATAAA	-27	NA	34043320	34042010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34042305_34043272
ENSMUST00000173900.2	chr17	+	1111	2	FSM	ENSMUSG00000092368.2	ENSMUST00000173900.2	1111	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTATCTCTATTAGTC	NA	False	NA	NA	False	AATAAA	-45	NA	36305344	36349327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_36305453_36348324
ENSMUST00000173937.8	chr4	+	756	4	FSM	ENSMUSG00000028797.21	ENSMUST00000173937.8	756	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	291.296336323606	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTACAGAGTGAGTCCA	3187	False	NA	NA	False	NA	NA	NA	129494483	129501609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_129494525_129494775_129495037_129500879_129500973_129501248
ENSMUST00000173969.2	chr12	-	1152	2	FSM	ENSMUSG00000091931.6	ENSMUST00000173969.2	1152	2	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	0	9132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTTCTGTAGCCTCTT	6362	False	NA	-1	True	AATAAA	-20	NA	102724059	102719533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_102720426_102723799
ENSMUST00000173991.8	chr8	+	786	4	FSM	ENSMUSG00000031562.17	ENSMUST00000173991.8	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_1	45.0209827623619	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTGACATATTGTGCAT	NA	False	NA	NA	False	AATATA	-19	NA	48563199	48590726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292
ENSMUST00000174011.8	chr13	-	2353	4	FSM	ENSMUSG00000021519.12	ENSMUST00000174011.8	2353	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	10.2306728354819	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATGGTCATTACTGTT	427	False	NA	NA	False	AATAAA	-15	NA	67081102	67069252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67071010_67076233_67076387_67077948_67078288_67080998
ENSMUST00000174021.8	chr15	-	3318	17	FSM	ENSMUSG00000042632.18	ENSMUST00000174021.8	3318	17	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_16	39.721638860324	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212164	79170427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
ENSMUST00000174037.8	chr17	-	665	5	FSM	ENSMUSG00000036185.10	ENSMUST00000174037.8	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	14.8218588577816	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGGTTTGGCTCCTGT	NA	False	NA	NA	False	AATAAA	-35	NA	35246890	35244934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35245124_35245313_35245434_35245669_35245763_35246419_35246565_35246772
ENSMUST00000174039.8	chr17	-	934	3	FSM	ENSMUSG00000092203.8	ENSMUST00000174039.8	934	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	40	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAATAGACTTTTTCTG	6044	False	NA	NA	False	AATAAA	-15	NA	35171410	35169217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35169452_35169673_35169824_35170860
ENSMUST00000174050.8	chr9	+	2715	20	FSM	ENSMUSG00000033335.18	ENSMUST00000174050.8	2715	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	233.547802766982	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	6178	False	NA	15	True	AATAAA	-16	NA	21336539	21419050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21390194_21390334_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ENSMUST00000174051.8	chr7	+	1821	7	FSM	ENSMUSG00000038943.17	ENSMUST00000174051.8	1821	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	413.618852998211	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTTTTGTCTTCAAT	NA	False	NA	16	True	AATAAA	-26	NA	79959144	79966005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963277_79963317_79964861
ENSMUST00000174105.8	chr9	-	2142	12	FSM	ENSMUSG00000032113.17	ENSMUST00000174105.8	2142	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	131.27033490643	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGGGTCCTGTATTCC	721	False	NA	NA	False	ATTAAA	-12	NA	36637881	36620735	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36637092_36637175_36637858
ENSMUST00000174164.2	chr17	+	1711	6	FSM	ENSMUSG00000019432.16	ENSMUST00000174164.2	1711	6	0	0	0	0	multi-exon	FALSE	canonical	3	2129	junction_1	90.1962305199059	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTTCTCTCATTTT	NA	False	NA	NA	False	NA	NA	NA	35460780	35468846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926
ENSMUST00000174172.8	chr7	+	3008	15	FSM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_13	238.868890688544	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACACTGTTTTGTCTTC	NA	False	NA	13	True	AATAAA	-23	NA	79944252	79966002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
ENSMUST00000174175.8	chr17	-	632	4	FSM	ENSMUSG00000008668.16	ENSMUST00000174175.8	632	4	0	0	0	0	multi-exon	FALSE	canonical	3	20050	junction_3	1274.65978031613	166426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGTCTCAGTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	34174634	34170973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34171093_34171194_34171566_34174051_34174151_34174591
ENSMUST00000174230.2	chr13	-	1053	7	FSM	ENSMUSG00000021418.16	ENSMUST00000174230.2	1053	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	206.52017657685	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGAGTCACACCTTGCT	NA	False	NA	-17	True	CATAAA	-12	NA	36090327	36080697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36088401_36088547_36090186
ENSMUST00000174252.8	chr10	-	4817	18	FSM	ENSMUSG00000069539.12	ENSMUST00000174252.8	4817	18	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	5.88058797050879	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTGGAACAGTTCAG	NA	False	NA	0	True	AATAAA	-17	NA	89522147	89474582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_89476979_89477852_89477973_89481323_89481420_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
ENSMUST00000174259.8	chr14	+	1112	11	FSM	ENSMUSG00000022216.18	ENSMUST00000174259.8	1112	11	0	0	0	0	multi-exon	FALSE	canonical	1	117	junction_4	54.1775783881118	2275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTCTTTATTGTATG	NA	False	NA	14	True	AATAAA	-18	NA	55815816	55818985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55816071_55817051_55817085_55817227_55817291_55817387_55817499_55817570_55817617_55817786_55817885_55818051_55818121_55818200_55818269_55818374_55818430_55818508_55818596_55818757
ENSMUST00000174269.8	chr9	-	3286	12	FSM	ENSMUSG00000032423.13	ENSMUST00000174269.8	3286	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	268.954664525916	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGTCATTAATATAAATG	NA	False	NA	34	True	AATAAA	-16	NA	88364184	88334692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345112_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ENSMUST00000174281.9	chr17	+	3611	24	FSM	ENSMUSG00000024392.18	ENSMUST00000174281.9	3611	24	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	176.22061486662	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTTGGTCTCTTTGCTG	9040	False	NA	NA	False	NA	NA	NA	35354705	35365325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35354981_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221
ENSMUST00000174282.8	chr9	-	3404	12	FSM	ENSMUSG00000032423.13	ENSMUST00000174282.8	3404	12	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	221.053263840518	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGGCGAGTGTAACTT	NA	False	NA	-15	True	AATAAA	-18	NA	88364249	88334741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88336346_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ENSMUST00000174355.8	chr7	-	1104	4	FSM	ENSMUSG00000002985.17	ENSMUST00000174355.8	1104	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4936.24555935199	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGAGTCTCTGTGAGT	NA	False	NA	-30	True	AATAAA	-14	NA	19432933	19430196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432896
ENSMUST00000174407.3	chr7	-	4069	7	FSM	ENSMUSG00000092416.3	ENSMUST00000174407.3	4069	7	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_4	65.4285021140549	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTACTTACTGCTGTCTT	NA	False	NA	-15	True	AATAAA	-15	NA	42155150	42122809	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42150781_42150850_42155033
ENSMUST00000174464.2	chr17	-	785	2	FSM	ENSMUSG00000092203.8	ENSMUST00000174464.2	785	2	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	0	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGACTTTTTCTGTGTC	7234	False	NA	NA	False	AATAAA	-19	NA	35170220	35169213	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35169452_35169673
ENSMUST00000174467.2	chr17	-	462	2	FSM	ENSMUSG00000092564.3	ENSMUST00000174467.2	462	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATATTCCCTTTTACG	1223	False	NA	-5	True	AATAAA	-23	NA	34128183	34127155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34127561_34128126
ENSMUST00000174472.3	chr13	+	1757	9	FSM	ENSMUSG00000038683.17	ENSMUST00000174472.3	1757	9	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_2	42.5147033389626	2006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAGCTTAATTACATTT	NA	False	NA	NA	False	AGTAAA	-26	NA	41154741	41166489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
ENSMUST00000174493.8	chr17	+	1254	7	FSM	ENSMUSG00000007039.13	ENSMUST00000174493.8	1254	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	164.014989152415	2979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	False	NA	17	True	AATAAA	-23	NA	35278076	35281071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280576_35280766
ENSMUST00000174498.2	chr17	+	419	2	FSM	ENSMUSG00000041881.14	ENSMUST00000174498.2	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTTCTCTTGAACTT	4147	False	NA	11	True	NA	NA	NA	34043618	34044820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34043792_34044574
ENSMUST00000174510.8	chr10	+	2031	6	FSM	ENSMUSG00000009293.18	ENSMUST00000174510.8	2031	6	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_5	14.0427917452336	415	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTTGTGTGGTGCTCA	90	False	NA	5	True	AATAAA	-18	NA	77458108	77481827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_77458251_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
ENSMUST00000174536.2	chr8	-	1096	1	FSM	ENSMUSG00000091952.4	ENSMUST00000174536.2	1096	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCATTCTTGTAGCTCTT	NA	False	NA	NA	False	NA	NA	NA	122700561	122699465	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_122699500_122700600
ENSMUST00000174561.8	chr3	+	810	5	FSM	ENSMUSG00000037894.14	ENSMUST00000174561.8	810	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_3	6290.0667921732	10034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGCTTTAAACTTGCT	NA	False	NA	-3	True	AATAAA	-12	NA	137570333	137572579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571840_137571902_137572146
ENSMUST00000174583.8	chr1	+	3015	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174583.8	3015	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	78.7922726047562	2262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCATTTCCTCGGATTAA	NA	False	NA	NA	False	NA	NA	NA	87254751	87285506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282702
ENSMUST00000174592.8	chr10	-	882	5	FSM	ENSMUSG00000059554.13	ENSMUST00000174592.8	882	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	27.2901080979904	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTCATCTCTGTTTTCTGT	NA	False	NA	-6	True	AATAAA	-15	NA	18103221	18089429	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_18089927_18092007_18092031_18095235_18095391_18100644_18100809_18103178
ENSMUST00000174595.2	chr17	+	1911	7	FSM	ENSMUSG00000034254.18	ENSMUST00000174595.2	1911	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	46.7882345134852	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGGTTCTCTGCGGCCT	NA	False	NA	13	True	AATAAA	-13	NA	34828578	34832392	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34828642_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
ENSMUST00000174609.9	chr17	-	527	5	FSM	ENSMUSG00000008668.16	ENSMUST00000174609.9	527	5	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_2	9115.60860557319	142290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174637	34170972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34171093_34171194_34171268_34171376_34171566_34174051_34174151_34174591
ENSMUST00000174616.8	chr11	+	2094	15	FSM	ENSMUSG00000018906.15	ENSMUST00000174616.8	2094	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.6135456967631	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTATTTTGGAGTGTTTT	NA	False	NA	25	True	AATAAA	-27	NA	53991800	54022488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_53991867_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
ENSMUST00000174620.3	chr17	-	974	4	FSM	ENSMUSG00000008668.16	ENSMUST00000174620.3	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	21077	junction_1	1022.38979302851	59745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCCGTCTCAGTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	34174627	34170975	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051
ENSMUST00000174662.2	chr17	-	395	2	FSM	ENSMUSG00000008668.16	ENSMUST00000174662.2	395	2	0	0	0	0	multi-exon	FALSE	canonical	3	20050	junction_1	0	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTGGTCTGCAGAAGCTA	NA	False	NA	NA	False	NA	NA	NA	34174634	34173798	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34174151_34174591
ENSMUST00000174670.2	chr17	+	1231	4	FSM	ENSMUSG00000024334.10	ENSMUST00000174670.2	1231	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	6.79869268479038	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGTGTCCTTTTCAC	3847	False	NA	NA	False	ACTAAA	-15	NA	34311395	34314207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34311503_34312806_34313564_34313656_34313793_34313976
ENSMUST00000174671.8	chr1	+	3074	9	FSM	ENSMUSG00000048000.16	ENSMUST00000174671.8	3074	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.9319374352351	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	563	False	NA	7	True	AATAAA	-17	NA	87360841	87378518	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87360921_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ENSMUST00000174672.2	chr17	+	2597	3	FSM	ENSMUSG00000036036.16	ENSMUST00000174672.2	2597	3	0	0	0	0	multi-exon	FALSE	canonical	3	2767	junction_1	286	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37314557	37321524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_37315796_37316941_37317087_37320310
ENSMUST00000174704.8	chr18	-	1789	18	FSM	ENSMUSG00000053644.14	ENSMUST00000174704.8	1789	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	101.074812129723	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAGATAGGTTTGGTGA	NA	False	NA	-11	True	ATTAAA	-24	NA	56695290	56659821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675324_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
ENSMUST00000174711.8	chr17	-	520	4	FSM	ENSMUSG00000036398.14	ENSMUST00000174711.8	520	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	334.250737554243	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGCCTCCGTTCTCCT	NA	False	NA	-15	True	AATATA	-23	NA	37262633	37260181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_37260447_37260768_37260878_37262314_37262401_37262573
ENSMUST00000174714.8	chr17	-	520	4	FSM	ENSMUSG00000092203.8	ENSMUST00000174714.8	520	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	75.5439533575579	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATAGACTTTTTCTGT	6030	False	NA	NA	False	AATAAA	-16	NA	35171424	35169216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35169452_35169673_35169824_35171111_35171150_35171327
ENSMUST00000174745.8	chr17	-	536	4	FSM	ENSMUSG00000008668.16	ENSMUST00000174745.8	536	4	0	0	0	0	multi-exon	FALSE	canonical	3	21077	junction_1	1022.38979302851	59553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174186	34170972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051
ENSMUST00000174758.8	chr17	-	499	3	FSM	ENSMUSG00000008668.16	ENSMUST00000174758.8	499	3	0	0	0	0	multi-exon	FALSE	canonical	3	21077	junction_1	1139	4938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34171663	34170972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34171093_34171194_34171287_34171376
ENSMUST00000174779.8	chr17	-	632	5	FSM	ENSMUSG00000024387.14	ENSMUST00000174779.8	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	826	junction_1	44.5028089001133	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCTCCTACTGTGT	NA	False	NA	-9	True	AATAAA	-15	NA	35338751	35335173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729
ENSMUST00000174786.2	chr19	+	646	3	FSM	ENSMUSG00000038812.17	ENSMUST00000174786.2	646	3	0	0	0	0	multi-exon	FALSE	canonical	3	803	junction_1	28.5	4160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	9731	False	NA	16	True	ATTAAA	-16	NA	6887531	6888396	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6887631_6887730_6887833_6887951
ENSMUST00000174799.2	chr19	+	843	4	FSM	ENSMUSG00000024856.11	ENSMUST00000174799.2	843	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	272.140078309356	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTCAGCCTTTCTGTG	7096	False	NA	27	True	AATAAA	-16	NA	4147401	4149010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4147508_4147816_4147908_4148004_4148138_4148497
ENSMUST00000174846.8	chr1	+	995	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174846.8	995	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	89.5408038581046	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATAGTTTCATTGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	87254719	87283444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282692
ENSMUST00000174882.8	chr7	+	1850	13	FSM	ENSMUSG00000015165.17	ENSMUST00000174882.8	1850	13	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_6	2150.9690451825	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGCTGGGGCTCCAAG	NA	False	NA	16	True	AATAAA	-19	NA	28512769	28521674	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28516759_28516830_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ENSMUST00000174939.3	chr4	-	79	1	FSM	ENSMUSG00000092680.3	ENSMUST00000174939.3	79	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCCCGCGCAGCGCGGG	NA	False	NA	NA	False	NA	NA	NA	117013045	117012966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_117013000_117013000
ENSMUST00000175078.3	chr18	+	132	1	FSM	ENSMUSG00000092819.3	ENSMUST00000175078.3	132	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	954	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTACTCTAGCCTGTGTG	NA	False	NA	10	True	NA	NA	NA	33928216	33928348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_33928200_33928300
ENSMUST00000175437.3	chr1	-	87	1	FSM	ENSMUSG00000093178.3	ENSMUST00000175437.3	87	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATATAGATGATGCAAAT	NA	False	NA	NA	False	NA	NA	NA	10012774	10012687	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_10012700_10012800
ENSMUST00000175573.3	chr19	-	76	1	FSM	ENSMUSG00000093314.3	ENSMUST00000175573.3	76	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7938	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGTAGATCCTCCTT	NA	False	NA	NA	False	NA	NA	NA	8866138	8866062	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8866100_8866100
ENSMUST00000175666.2	chr12	-	979	3	FSM	ENSMUSG00000002996.18	ENSMUST00000175666.2	979	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	45	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGTAGATTGTTTCAT	NA	False	NA	NA	False	ATTAAA	-21	NA	32000233	31989749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_31990506_31993827_31994012_32000194
ENSMUST00000175668.2	chr17	+	385	2	FSM	ENSMUSG00000093622.2	ENSMUST00000175668.2	385	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAGAAAATTTTAAATAAA	280	False	NA	-4	True	ATTAAA	-8	NA	71141658	71143039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_71141798_71142793
ENSMUST00000175692.8	chr8	+	1371	8	FSM	ENSMUSG00000031568.17	ENSMUST00000175692.8	1371	8	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_2	58.3067189043231	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTTTCTCTCGGACTG	NA	False	NA	5	True	AATAAA	-13	NA	47986698	48004314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_47986979_47990313_47990395_47995730_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48001006_48001010_48003729
ENSMUST00000175714.8	chr15	+	1953	9	FSM	ENSMUSG00000009585.19	ENSMUST00000175714.8	1953	9	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTTGTGCATGATTG	8246	False	NA	6	True	NA	NA	NA	79776603	79792119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUST00000175741.8	chr11	-	2337	4	FSM	ENSMUSG00000018733.11	ENSMUST00000175741.8	2337	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	26.4112770527204	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGACTTCTTGAAGTTT	2473	False	NA	-7	True	AATAAA	-16	NA	83189721	83185900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189542
ENSMUST00000175752.8	chr15	+	1977	8	FSM	ENSMUSG00000009585.19	ENSMUST00000175752.8	1977	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	224.554434107971	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCCCTCACCCATCAGA	8291	False	NA	NA	False	AATAAA	-15	NA	79776648	79792287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUST00000175860.2	chr3	+	492	1	FSM	ENSMUSG00000093392.2	ENSMUST00000175860.2	492	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	386	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTCTTTTGACTTGCGG	5895	False	NA	NA	False	NA	NA	NA	122050376	122050868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_122050400_122050900
ENSMUST00000175865.6	chr6	-	757	4	FSM	ENSMUSG00000091625.9	ENSMUST00000175865.6	757	4	0	0	0	0	multi-exon	FALSE	canonical	3	1056	junction_2	255.422525762053	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGATTTGATTTATTA	NA	False	NA	NA	False	AATAAA	-14	NA	56681662	56678049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_56678275_56679080_56679154_56679990_56680395_56681607
ENSMUST00000175922.8	chr7	+	1102	9	FSM	ENSMUSG00000030982.20	ENSMUST00000175922.8	1102	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	239.086804320105	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTGCAAAATTTAATTGAA	NA	False	NA	NA	False	NA	NA	NA	118339969	118361369	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_118339999_118342832_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118360988
ENSMUST00000175934.8	chr18	-	4595	26	FSM	ENSMUSG00000024613.17	ENSMUST00000175934.8	4595	26	0	0	0	0	multi-exon	FALSE	canonical	2	549	junction_9	234.649375878139	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982001	60946826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ENSMUST00000175940.2	chr8	-	2890	4	FSM	ENSMUSG00000046691.15	ENSMUST00000175940.2	2890	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	147.606082379947	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTGTCGCTCCATTT	NA	False	NA	-31	True	AATAAA	-13	NA	107619847	107610525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_107613159_107613551_107613670_107613932_107613989_107619764
ENSMUST00000175977.8	chr16	-	1470	14	FSM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1348.92399371811	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTTGTCATAGGTTAAG	NA	False	NA	-70	True	NA	NA	NA	87292676	87280875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87288185_87288340_87290594_87290675_87291224_87291316_87292616
ENSMUST00000176010.8	chr10	-	582	4	FSM	ENSMUSG00000093674.8	ENSMUST00000176010.8	582	4	0	0	0	0	multi-exon	FALSE	canonical	3	7075	junction_3	6241.33064516071	327651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128385174	128383982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128384299_128384526_128384550_128384817_128384843_128384956
ENSMUST00000176015.5	chr5	+	980	7	FSM	ENSMUSG00000029223.13	ENSMUST00000176015.5	980	7	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_2	35.4479273802511	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGCTGGTTTTTATTTT	NA	False	NA	28	True	AATAAA	-17	NA	66834234	66844572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ENSMUST00000176016.2	chr11	+	471	2	FSM	ENSMUSG00000093483.2	ENSMUST00000176016.2	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_1	0	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTATTTGTTTGGGTAA	5892	False	NA	8	True	ATTAAA	-17	NA	83182568	83185456	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_83182924_83185340
ENSMUST00000176033.2	chr3	-	279	1	FSM	ENSMUSG00000093384.2	ENSMUST00000176033.2	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTCCTCTGAGTAGAGA	NA	False	NA	NA	False	NA	NA	NA	68807782	68807503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_68807500_68807800
ENSMUST00000176086.8	chr17	-	2687	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176086.8	2687	21	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_19	106.585693223809	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746864	24727823	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738087_24738221_24746739
ENSMUST00000176116.8	chr11	-	1688	8	FSM	ENSMUSG00000040904.11	ENSMUST00000176116.8	1688	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	221.001523681145	6519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	-12	True	ATTAAA	-15	NA	70130656	70126031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_70126295_70126521_70126627_70126849_70127038_70127702_70127805_70128356_70128452_70128609_70129297_70129763_70129841_70130485
ENSMUST00000176134.2	chr2	-	1196	3	FSM	ENSMUSG00000085741.9	ENSMUST00000176134.2	1196	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	9	699	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAACTTAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	156704865	156694349	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_156694611_156695350_156695939_156704518
ENSMUST00000176158.2	chr7	-	869	3	FSM	ENSMUSG00000030879.11	ENSMUST00000176158.2	869	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1127	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGGATTTATGGAAAGTAA	NA	False	NA	-5	True	GATAAA	-43	NA	105460165	105458863	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_105459352_105459495_105459726_105460014
ENSMUST00000176184.2	chr10	-	695	3	FSM	ENSMUSG00000093674.8	ENSMUST00000176184.2	695	3	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_2	10878.5	31899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAACTGCTGTTACGTG	NA	False	NA	-25	True	AATAAA	-22	NA	128385028	128383989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128384299_128384526_128384841_128384956
ENSMUST00000176200.8	chr10	-	586	2	FSM	ENSMUSG00000063320.12	ENSMUST00000176200.8	586	2	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	0	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTACTATACATTCTTGG	NA	False	NA	0	True	NA	NA	NA	82458760	82455684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_82456052_82458541
ENSMUST00000176215.2	chr17	+	477	1	FSM	ENSMUSG00000093565.2	ENSMUST00000176215.2	477	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTTTCAGACGTTGT	4783	False	NA	13	True	AATAAA	-16	NA	24747240	24747717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24747200_24747700
ENSMUST00000176216.9	chr5	-	2821	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176216.9	2821	23	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	19.9470373118581	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	-1	True	AATAAA	-18	NA	136596102	136276988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ENSMUST00000176304.8	chr7	+	1006	7	FSM	ENSMUSG00000019737.15	ENSMUST00000176304.8	1006	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	73.2385751423994	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAGAATATCAGTACT	NA	False	NA	11	True	ATTAAA	-18	NA	30014340	30018471	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30017392_30017468_30018097_30018157_30018248
ENSMUST00000176353.8	chr17	-	2503	20	FSM	ENSMUSG00000052752.16	ENSMUST00000176353.8	2503	20	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_16	139.813924621282	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746820	24727823	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24735478_24735574_24737715_24737774_24738104_24738221_24746739
ENSMUST00000176511.8	chr13	+	2703	6	FSM	ENSMUSG00000006720.17	ENSMUST00000176511.8	2703	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	19.7949488506538	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTTAAGTTTCTTCTG	NA	False	NA	12	True	ATTAAA	-16	NA	22129263	22144655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_22129370_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
ENSMUST00000176518.2	chr11	-	2501	3	FSM	ENSMUSG00000018733.11	ENSMUST00000176518.2	2501	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	7.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGACTTCTTGAAGTT	2471	False	NA	-8	True	AATAAA	-15	NA	83189723	83185901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_83187267_83188313_83188868_83189141
ENSMUST00000176536.2	chr7	+	1079	3	FSM	ENSMUSG00000019737.15	ENSMUST00000176536.2	1079	3	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	17.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGATGTCTGAGAATATC	NA	False	NA	5	True	ATTAAA	-12	NA	30016664	30018465	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30017468_30018097_30018157_30018248
ENSMUST00000176545.2	chr11	+	356	3	FSM	ENSMUSG00000093483.2	ENSMUST00000176545.2	356	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	166	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATTTGTTTGGGTAAGA	5869	False	NA	10	True	ATTAAA	-19	NA	83182545	83185458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_83182660_83182799_83182924_83185340
ENSMUST00000176557.8	chr9	+	1898	8	FSM	ENSMUSG00000032336.18	ENSMUST00000176557.8	1898	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	135.42570822772	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGAATAATACTCTTTA	16	False	NA	NA	False	AATAAA	-16	NA	58489688	58560161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557791_58557802_58558540_58558616_58559141
ENSMUST00000176569.3	chr3	-	555	2	FSM	ENSMUSG00000093424.4	ENSMUST00000176569.3	555	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGTACATTGTTG	9735	False	NA	NA	False	NA	NA	NA	95222438	95218688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95218919_95222113
ENSMUST00000176610.9	chr19	-	2065	12	FSM	ENSMUSG00000003680.17	ENSMUST00000176610.9	2065	12	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	26.5722156514676	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTGTCTATGCTCGTG	9901	False	NA	-3	True	AATAAA	-14	NA	8763680	8751855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
ENSMUST00000176619.2	chr9	+	2527	3	FSM	ENSMUSG00000037845.15	ENSMUST00000176619.2	2527	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0.5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTCTGGACTCTTGTG	NA	False	NA	2	True	AAAAAG	-17	NA	50679537	50683969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_50680145_50681409_50682091_50682730
ENSMUST00000176630.8	chr18	-	4529	25	FSM	ENSMUSG00000024613.17	ENSMUST00000176630.8	4529	25	0	0	0	0	multi-exon	FALSE	canonical	2	677	junction_9	198.19802369656	1672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982043	60946826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ENSMUST00000176636.5	chr9	-	2522	13	FSM	ENSMUSG00000032015.17	ENSMUST00000176636.5	2522	13	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_12	13.5359603361646	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGTTCAGAGGAGTG	NA	False	NA	NA	False	CATAAA	-17	NA	43117052	43035233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43116950
ENSMUST00000176637.2	chr4	+	2832	10	FSM	ENSMUSG00000029064.16	ENSMUST00000176637.2	2832	10	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_9	969.739191105233	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGGTGTGATGGTTAT	2379	False	NA	25	True	AATAAA	-17	NA	155611909	155643724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ENSMUST00000176652.8	chr17	-	3003	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176652.8	3003	21	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_18	53.1587010751768	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCATGTTCAGATGAGGA	NA	False	NA	NA	False	NA	NA	NA	24746912	24727535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ENSMUST00000176667.8	chr5	+	2209	18	FSM	ENSMUSG00000093445.8	ENSMUST00000176667.8	2209	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	70.0872417297699	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTGTGCCTGCCTGTCC	2241	False	NA	30	True	AATAAA	-32	NA	137627439	137639361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137639026
ENSMUST00000176668.8	chr17	-	2667	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176668.8	2667	21	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_17	106.150647666418	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746824	24727823	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733841_24735478_24735574_24737715_24737774_24738104_24738221_24746739
ENSMUST00000176670.8	chr10	-	2227	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_6	215.998518513438	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	4515	False	NA	-12	True	AATAAA	-13	NA	117212834	117184946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ENSMUST00000176683.8	chr10	-	437	4	FSM	ENSMUSG00000093674.8	ENSMUST00000176683.8	437	4	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_3	9065.73447413697	319210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128385031	128383982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128384299_128384526_128384550_128384817_128384841_128384956
ENSMUST00000176686.8	chr10	-	2200	10	FSM	ENSMUSG00000055531.13	ENSMUST00000176686.8	2200	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	212.334001975806	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTAAAGCTGTTCACGT	4471	False	NA	-9	True	AATAAA	-16	NA	117212878	117184943	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_117185407_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ENSMUST00000176745.8	chr5	-	2831	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176745.8	2831	23	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_13	14.4244970693081	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	-1	True	AATAAA	-18	NA	136596118	136276988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ENSMUST00000176777.8	chr8	-	944	8	FSM	ENSMUSG00000034799.17	ENSMUST00000176777.8	944	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	16.3682120998886	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTATATATAACAAGTTG	NA	False	NA	3	True	NA	NA	NA	72124385	72112984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_72113294_72114462_72114496_72115124_72115180_72115483_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
ENSMUST00000176799.8	chr11	+	847	4	FSM	ENSMUSG00000090266.11	ENSMUST00000176799.8	847	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	14.8996644257513	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCAATGGGTATGAAGA	9063	False	NA	17	True	CATAAA	-17	NA	116734498	116740455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116734601_116739079_116739185_116739726_116740127_116740215
ENSMUST00000176834.8	chr11	-	620	3	FSM	ENSMUSG00000034120.19	ENSMUST00000176834.8	620	3	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	811.5	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAATGTGTCCTGGTCTTT	7011	False	NA	-10	True	ATTAAA	-26	NA	116742912	116740731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_116741180_116741681_116741788_116742846
ENSMUST00000176906.2	chr10	-	509	3	FSM	ENSMUSG00000093674.8	ENSMUST00000176906.2	509	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	7652	153061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAACTGCTGTTACGTGT	NA	False	NA	-24	True	AATAAA	-23	NA	128384971	128383988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128384321_128384526_128384550_128384817
ENSMUST00000176921.2	chr17	+	298	2	FSM	ENSMUSG00000093565.2	ENSMUST00000176921.2	298	2	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_1	0	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTCAGACGTTGTG	4764	False	NA	14	True	AATAAA	-17	NA	24747221	24747718	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24747411_24747609
ENSMUST00000176939.8	chr19	-	3427	19	FSM	ENSMUSG00000025007.14	ENSMUST00000176939.8	3427	19	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_12	241.939820085925	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576813	40538700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562660_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ENSMUST00000176957.8	chr14	+	1117	9	FSM	ENSMUSG00000021996.17	ENSMUST00000176957.8	1117	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	425.971756692859	5837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAATTGTTATTTT	NA	False	NA	13	True	AATAAA	-14	NA	74969823	74987288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_74969962_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
ENSMUST00000176966.2	chr10	-	523	2	FSM	ENSMUSG00000093674.8	ENSMUST00000176966.2	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	7075	junction_1	0	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GCAAAGGAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	128384981	128384344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128384843_128384956
ENSMUST00000177019.8	chr13	-	2626	15	FSM	ENSMUSG00000021546.19	ENSMUST00000177019.8	2626	15	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_9	1943.30427759168	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4803	False	NA	-23	True	AATAAA	-15	NA	58550278	58539052	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUST00000177068.8	chr8	-	2931	4	FSM	ENSMUSG00000046691.15	ENSMUST00000177068.8	2931	4	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_2	18.5472369909914	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGCTTGTTTTTTTTA	NA	False	NA	0	True	AATAAA	-44	NA	107620225	107610494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_107613159_107613551_107613670_107613932_107613989_107620132
ENSMUST00000177102.8	chr7	+	2928	14	FSM	ENSMUSG00000030523.19	ENSMUST00000177102.8	2928	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_13	349.928648686554	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACGCGCCTGCCTGTAT	NA	False	NA	85	True	ATTAAA	-12	NA	63835206	63874584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438
ENSMUST00000177113.2	chr3	+	381	1	FSM	ENSMUSG00000105827.2	ENSMUST00000177113.2	381	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCAGCAGAGACGTGATT	3078	False	NA	NA	False	NA	NA	NA	96177067	96177448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96177100_96177400
ENSMUST00000177150.2	chr11	+	383	3	FSM	ENSMUSG00000093483.2	ENSMUST00000177150.2	383	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	190.5	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTATTTGTTTGGGTAAG	5848	False	NA	9	True	ATTAAA	-18	NA	83182524	83185457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_83182660_83182792_83182924_83185340
ENSMUST00000177163.8	chr10	-	544	3	FSM	ENSMUSG00000093674.8	ENSMUST00000177163.8	544	3	0	0	0	0	multi-exon	FALSE	canonical	3	15318	junction_2	3514.5	307118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128385022	128383982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128384299_128384526_128384550_128384817
ENSMUST00000177177.8	chr6	+	854	9	FSM	ENSMUSG00000069678.11	ENSMUST00000177177.8	854	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65.3345955447801	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCATCTTCCTTCTTA	101	False	NA	23	True	AATAAA	-15	NA	83055610	83057835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83055681_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ENSMUST00000177207.2	chr14	+	1476	3	FSM	ENSMUSG00000022010.20	ENSMUST00000177207.2	1476	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1157	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGTGTTTCTATATGAC	6275	False	NA	29	True	AATAAA	-19	NA	76741653	76745203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_76741734_76742688_76742738_76743856
ENSMUST00000177248.2	chr11	+	431	2	FSM	ENSMUSG00000093483.2	ENSMUST00000177248.2	431	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCCATGAGATGAGTGC	5877	False	NA	NA	False	NA	NA	NA	83182553	83183117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_83182660_83182792
ENSMUST00000177258.2	chr5	+	1368	2	FSM	ENSMUSG00000053178.6	ENSMUST00000177258.2	1368	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	592	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATTTTGTATGTATT	NA	False	NA	NA	False	AATAAA	-22	NA	4242366	4247651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_4242419_4246335
ENSMUST00000177335.2	chr15	-	3654	2	FSM	ENSMUSG00000009739.18	ENSMUST00000177335.2	3654	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTCTCTGCCTATTTTG	8506	False	NA	-3	True	AATAAA	-18	NA	100478112	100473201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_100476500_100477756
ENSMUST00000177359.2	chr15	-	1110	3	FSM	ENSMUSG00000053929.18	ENSMUST00000177359.2	1110	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	30	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTATGGAATTTGTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	76544317	76542339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76543066_76543418_76543640_76544154
ENSMUST00000177376.8	chr16	-	1567	14	FSM	ENSMUSG00000025613.14	ENSMUST00000177376.8	1567	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	1347.5202032715	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTTGTCATAGGTTAAG	NA	False	NA	-70	True	NA	NA	NA	87292676	87280875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87291224_87291316_87292616
ENSMUST00000177415.2	chr17	-	354	1	FSM	ENSMUSG00000093686.2	ENSMUST00000177415.2	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2870	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCACACTTTTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	66720979	66720625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_66720600_66721000
ENSMUST00000177461.3	chr5	+	131	1	FSM	ENSMUSG00000093413.3	ENSMUST00000177461.3	131	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCTAAGCCTGCCCGA	NA	False	NA	NA	False	NA	NA	NA	129871608	129871739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129871600_129871700
ENSMUST00000177466.8	chr5	+	1005	6	FSM	ENSMUSG00000079165.11	ENSMUST00000177466.8	1005	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	39.5858560599616	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTGTTGACAATAAATCA	1101	False	NA	-8	True	NA	NA	NA	137639595	137641130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_137639819_137639983_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ENSMUST00000177470.8	chr17	-	2912	14	FSM	ENSMUSG00000025733.18	ENSMUST00000177470.8	2912	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	41.5966828445327	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCTTGGATTTTGATCT	6075	False	NA	-4	True	ATTAAA	-17	NA	26063437	26057813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059195_26059310_26059411_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26061066_26061153_26061393_26062080_26062135_26062914_26062959_26063062_26063288_26063373
ENSMUST00000177501.2	chr1	+	1636	3	FSM	ENSMUSG00000025940.7	ENSMUST00000177501.2	1636	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	240	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTATGTGTTTGTT	NA	False	NA	5	True	NA	NA	NA	16735430	16748419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_16735730_16737888_16737998_16747191
ENSMUST00000177513.2	chr10	-	680	3	FSM	ENSMUSG00000093674.8	ENSMUST00000177513.2	680	3	0	0	0	0	multi-exon	FALSE	canonical	3	7075	junction_2	7636	32545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCTGTTACGTGTTTT	NA	False	NA	-21	True	AATAAA	-26	NA	128385007	128383985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128384299_128384526_128384843_128384956
ENSMUST00000177533.2	chr11	+	308	3	FSM	ENSMUSG00000093483.2	ENSMUST00000177533.2	308	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	5.5	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTATTTGTTTGGGTA	5891	False	NA	7	True	ATTAAA	-16	NA	83182567	83185455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_83182660_83182792_83182894_83185340
ENSMUST00000177588.10	chr7	+	3174	28	FSM	ENSMUSG00000056394.21	ENSMUST00000177588.10	3174	28	0	0	0	0	multi-exon	TRUE	canonical	3	470	junction_1	193.081793225492	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	1107	False	NA	30	True	AATAAA	-18	NA	13011238	13045350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_13011456_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ENSMUST00000177604.2	chr18	-	2605	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	2316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGGCATGGTGGCTTCC	6726	False	NA	-8	True	NA	NA	NA	74340889	74328369	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
ENSMUST00000177714.8	chr9	-	2623	4	FSM	ENSMUSG00000074829.11	ENSMUST00000177714.8	2623	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	8.73053390247253	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTATTATCATGTTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	124075326	124054433	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_124056732_124057727_124057789_124057987_124058115_124075189
ENSMUST00000177752.9	chr19	-	664	6	FSM	ENSMUSG00000056629.17	ENSMUST00000177752.9	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_5	164.60571071503	2675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGAGTGAGTCTGTATT	NA	False	NA	-6	True	TTTAAA	-32	NA	6957869	6955111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6957761
ENSMUST00000177754.9	chr9	-	5248	39	FSM	ENSMUSG00000004099.17	ENSMUST00000177754.9	5248	39	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_38	184.537934602832	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	8561	False	NA	-7	True	AATAAA	-17	NA	20871184	20818504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20871028
ENSMUST00000177786.8	chr14	-	1955	7	FSM	ENSMUSG00000096574.8	ENSMUST00000177786.8	1955	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.46249406456535	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	AATAAA	-17	NA	19137146	19114973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19122451_19122587_19135569_19135684_19137061
ENSMUST00000177800.8	chr5	-	1668	4	FSM	ENSMUSG00000029600.11	ENSMUST00000177800.8	1668	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	33.2365260920372	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTAGTGTGTTACTTTTT	6315	False	NA	NA	False	ATTAAA	-20	NA	120750654	120747122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_120748028_120749442_120749795_120750044_120750140_120750338
ENSMUST00000177840.9	chr7	+	1708	8	FSM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	29.0537854500854	2118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATAAGCACTCGAATC	NA	False	NA	-2	True	NA	NA	NA	141047334	141051376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUST00000177841.8	chr7	+	1364	3	FSM	ENSMUSG00000045752.14	ENSMUST00000177841.8	1364	3	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	18	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142623104	142624824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_142623251_142623491_142623558_142623672
ENSMUST00000177850.8	chr10	+	708	6	FSM	ENSMUSG00000035242.16	ENSMUST00000177850.8	708	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	3349.66711181873	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTCTACACTCTGGAG	NA	False	NA	NA	False	NA	NA	NA	80662516	80664791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80662740_80664076_80664129_80664129_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUST00000177880.2	chr4	-	1969	2	FSM	ENSMUSG00000028629.10	ENSMUST00000177880.2	1969	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGTTGACTTGATGTT	NA	False	NA	-15	True	AATAAA	-16	NA	120782202	120778398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_120779873_120781707
ENSMUST00000177895.8	chr7	+	1486	9	FSM	ENSMUSG00000030638.14	ENSMUST00000177895.8	1486	9	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	89.2394951801051	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGTTATTTTCAATGTC	NA	False	NA	17	True	AATAAA	-24	NA	81824697	81956627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_81824768_81909339_81909409_81917487_81917561_81919987_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ENSMUST00000177916.8	chr13	-	3067	7	FSM	ENSMUSG00000094870.9	ENSMUST00000177916.8	3067	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	50.5426112854842	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGGTGTT	NA	False	NA	76	True	AGTAAA	-18	NA	120252341	120226722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
ENSMUST00000177943.8	chr1	+	3212	5	FSM	ENSMUSG00000026435.16	ENSMUST00000177943.8	3212	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	4.65698400254929	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTTGTCTTTTCTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	131890704	131910707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_131890791_131904455_131904851_131905150_131905937_131906485_131906752_131909028
ENSMUST00000177955.8	chr8	+	1307	10	FSM	ENSMUSG00000031505.12	ENSMUST00000177955.8	1307	10	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	41.4568048294447	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	33	True	NA	NA	NA	11547505	11563287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
ENSMUST00000178026.2	chr10	+	1218	6	FSM	ENSMUSG00000053219.16	ENSMUST00000178026.2	1218	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	12.9769025580067	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	22049817	22250038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22249675
ENSMUST00000178034.9	chr14	-	2730	15	FSM	ENSMUSG00000022218.17	ENSMUST00000178034.9	2730	15	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_14	38.2803834241775	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCTGTTTAGTAGTCCT	396	False	NA	-23	True	AATAAA	-22	NA	55950951	55937490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950843
ENSMUST00000178041.8	chr10	+	1536	13	FSM	ENSMUSG00000025395.15	ENSMUST00000178041.8	1536	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	189.963593003151	3037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTGCAGAAGTTTGTAA	980	False	NA	2	True	AATAAA	-12	NA	127851036	127865852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859448_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ENSMUST00000178074.8	chr12	+	4006	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAAGCTCTTACTTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	3285503	3291410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
ENSMUST00000178079.8	chr1	+	487	5	FSM	ENSMUSG00000073702.12	ENSMUST00000178079.8	487	5	0	0	0	0	multi-exon	FALSE	canonical	3	1086	junction_1	4596.75456164455	74816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCAGGGTTTGGTTTTCC	NA	False	NA	24	True	AATAAA	-13	NA	39407009	39410445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_39407088_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ENSMUST00000178085.8	chrX	+	1931	4	FSM	ENSMUSG00000045330.9	ENSMUST00000178085.8	1931	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.94392028877595	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAATCTTTTCTGTTTGG	NA	False	NA	NA	False	AATAAA	-21	NA	61327104	61335684	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_61327160_61332956_61333046_61333767_61333841_61333970
ENSMUST00000178105.3	chr11	-	2187	2	FSM	ENSMUSG00000020483.15	ENSMUST00000178105.3	2187	2	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	0	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTGGGGTTTCTTTGGG	691	False	NA	0	True	ATTAAA	-22	NA	87874838	87870350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_87872397_87874697
ENSMUST00000178114.2	chr19	-	2965	10	FSM	ENSMUSG00000024781.17	ENSMUST00000178114.2	2965	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	13.9283882771841	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCGGTGTGGTGTTTGC	5915	False	NA	-2	True	AATAAA	-20	NA	34504874	34469717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388_34486499_34488222_34488422_34500821_34500940_34502137_34502243_34504765
ENSMUST00000178147.3	chrX	-	651	1	FSM	ENSMUSG00000095597.3	ENSMUST00000178147.3	651	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86033	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	151693151	151692500	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_151692500_151693200
ENSMUST00000178162.3	chr7	+	3356	5	FSM	ENSMUSG00000011427.17	ENSMUST00000178162.3	3356	5	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	16.6789538041209	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGAGTTAATTTCTTT	NA	False	NA	NA	False	AAGAAA	-18	NA	29515538	29530430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_29515715_29522494_29522570_29524254_29524379_29525116_29525213_29527545
ENSMUST00000178202.8	chr11	-	4317	11	FSM	ENSMUSG00000001036.18	ENSMUST00000178202.8	4317	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	137.591569509182	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470513	61408075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61456647_61456721_61470392
ENSMUST00000178235.8	chr1	-	1756	11	FSM	ENSMUSG00000006299.14	ENSMUST00000178235.8	1756	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_10	361.877106211487	4123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGTCTGTGTGCAT	NA	False	NA	-5	True	AATAAA	-13	NA	74323839	74319004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323204_74323661
ENSMUST00000178267.8	chr9	-	4309	39	FSM	ENSMUSG00000041528.16	ENSMUST00000178267.8	4309	39	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_17	14.098780914274	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCCCTGGGCCCGCTC	NA	False	NA	-7	True	ATTAAA	-11	NA	107956574	107928875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ENSMUST00000178271.3	chr13	-	2966	8	FSM	ENSMUSG00000094870.9	ENSMUST00000178271.3	2966	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	48.3110668861025	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGGTGTT	NA	False	NA	76	True	AGTAAA	-18	NA	120252342	120226722	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
ENSMUST00000178289.3	chr13	+	2035	2	FSM	ENSMUSG00000039182.7	ENSMUST00000178289.3	2035	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCCTGTTTTTCATTGT	NA	False	NA	10	True	ATTAAA	-17	NA	14804738	14812788	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_14804870_14810884
ENSMUST00000178310.9	chr19	+	613	5	FSM	ENSMUSG00000038274.14	ENSMUST00000178310.9	613	5	0	0	0	0	multi-exon	FALSE	canonical	3	11442	junction_1	1294.53167207295	122389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	982	False	NA	4	True	AATAAA	-16	NA	6107873	6109549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6108032_6108272_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUST00000178319.2	chr4	+	1322	6	FSM	ENSMUSG00000094116.2	ENSMUST00000178319.2	1322	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.49666295470958	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTCTTTGCTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	73541220	73545264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_73541344_73542037_73542126_73542595_73542905_73543182_73543261_73544237_73544544_73544846
ENSMUST00000178320.2	chr16	+	1628	11	FSM	ENSMUSG00000004460.18	ENSMUST00000178320.2	1628	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_10	316.518893590888	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGCTTTGTCTTCCAGT	NA	False	NA	107	True	NA	NA	NA	22676594	22691215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420_22690514_22690889
ENSMUST00000178324.2	chr8	-	1989	15	FSM	ENSMUSG00000031478.17	ENSMUST00000178324.2	1989	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	9.42342933374911	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCGTGTGTGCTGGTTTT	922	False	NA	-1	True	AATACA	-14	NA	22652510	22618301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622216_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339
ENSMUST00000178331.8	chr12	+	812	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178331.8	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	69.5621225156974	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTCTCAGGACAAATTT	NA	False	NA	10	True	AATAAA	-19	NA	3285525	3288273	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063
ENSMUST00000178385.9	chr7	-	1538	7	FSM	ENSMUSG00000030629.16	ENSMUST00000178385.9	1538	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	230.002475832085	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	84328600	84264261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84328517
ENSMUST00000178399.3	chr14	-	1865	10	FSM	ENSMUSG00000022221.15	ENSMUST00000178399.3	1865	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	41.6620738209433	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGTCTGAGGTGTCAA	NA	False	NA	-3	True	AATAAA	-18	NA	56026314	56022453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025822_56026073
ENSMUST00000178421.8	chr13	-	1414	10	FSM	ENSMUSG00000021417.16	ENSMUST00000178421.8	1414	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	51.0630208542878	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178127	35161732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177996
ENSMUST00000178474.8	chr1	-	2565	12	FSM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	0	0	0	0	multi-exon	FALSE	canonical	3	2308	junction_6	123.717286351378	2784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTTTTTCTTCGTG	NA	False	NA	-4	True	AATAAA	-20	NA	125363284	125320642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
ENSMUST00000178573.8	chr16	+	1153	3	FSM	ENSMUSG00000022787.11	ENSMUST00000178573.8	1153	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	36.5	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCAACAGTAATTTTG	NA	False	NA	9	True	AATAAA	-10	NA	32066044	32075892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32066086_32070640_32071137_32075276
ENSMUST00000178615.8	chr19	-	1018	3	FSM	ENSMUSG00000094936.9	ENSMUST00000178615.8	1018	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	5.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATGTGTGCTTTGAGAA	NA	False	NA	-4	True	AATAAA	-16	NA	4843879	4835180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4835596_4842425_4842849_4843699
ENSMUST00000178627.8	chr1	+	1363	10	FSM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_9	29.8142396999972	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAGACCATGCTAGGC	319	False	NA	NA	False	AAGAAA	-16	NA	91178040	91213747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUST00000178632.8	chrX	+	933	3	FSM	ENSMUSG00000046432.13	ENSMUST00000178632.8	933	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_2	2417.5	13703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGAAATTCAACAGTATT	NA	False	NA	NA	False	AATAAA	-32	NA	135171001	135172727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_135171151_135171558_135171632_135172016
ENSMUST00000178721.2	chr8	+	1108	9	FSM	ENSMUSG00000031505.12	ENSMUST00000178721.2	1108	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	91.7509366437204	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	33	True	NA	NA	NA	11547583	11563287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11562894
ENSMUST00000178808.8	chr3	-	1462	8	FSM	ENSMUSG00000027890.18	ENSMUST00000178808.8	1462	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	32.937169624258	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGATGTCTTTTCCT	NA	False	NA	-6	True	AATAAA	-18	NA	107952175	107947725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107952160
ENSMUST00000178858.3	chr17	-	804	2	FSM	ENSMUSG00000079471.5	ENSMUST00000178858.3	804	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTGGTGGCTTTTGT	NA	False	NA	-5	True	AATAAA	-20	NA	45912993	45911896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45912612_45912904
ENSMUST00000178925.8	chr4	+	6557	11	FSM	ENSMUSG00000028282.13	ENSMUST00000178925.8	6557	11	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	42.596243965871	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTAGTATGCTTCTT	24	False	NA	7	True	AATAAA	-20	NA	32615472	32653265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ENSMUST00000178997.8	chr2	+	4161	18	FSM	ENSMUSG00000027469.17	ENSMUST00000178997.8	4161	18	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_2	164.31464036434	1699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	2694	False	NA	13	True	NA	NA	NA	152689883	152737241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_152690030_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUST00000178999.3	chr9	+	820	3	FSM	ENSMUSG00000058173.13	ENSMUST00000178999.3	820	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTTCTCTTGTTTG	NA	False	NA	11	True	AATAAA	-19	NA	15432154	15456556	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_15432176_15436923_15437001_15455834
ENSMUST00000179022.8	chr10	-	3370	12	FSM	ENSMUSG00000062075.14	ENSMUST00000179022.8	3370	12	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_8	24.5238962565761	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCAGAGTAGATCTTCA	3111	False	NA	-1	True	AATAAA	-17	NA	80754079	80737197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ENSMUST00000179062.8	chrX	-	3890	6	FSM	ENSMUSG00000046873.19	ENSMUST00000179062.8	3890	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	80.1164152967418	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGTTTAGATGAATGAA	NA	False	NA	NA	False	AATAAA	-14	NA	156381646	156348942	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_156352095_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ENSMUST00000179094.8	chr11	-	4052	17	FSM	ENSMUSG00000061306.17	ENSMUST00000179094.8	4052	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	187.660889305683	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5030	False	NA	-12	True	AATAAA	-12	NA	120042138	119995277	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_119996863_119997259_119997437_120000197_120000222_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ENSMUST00000179106.3	chr7	+	3319	4	FSM	ENSMUSG00000043831.13	ENSMUST00000179106.3	3319	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.8977121983832	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTCTCCCTCTTTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	66872376	66878211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_66872787_66873356_66873640_66874123_66874150_66875611
ENSMUST00000179117.2	chrX	+	2773	4	FSM	ENSMUSG00000067771.10	ENSMUST00000179117.2	2773	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	2.44948974278318	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAGTGTAGATGTCTAA	NA	False	NA	NA	False	AATAAA	-16	NA	72166673	72172866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_72166742_72167034_72167132_72168423_72168590_72170424
ENSMUST00000179118.2	chr19	-	840	6	FSM	ENSMUSG00000024963.13	ENSMUST00000179118.2	840	6	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_3	69.5097115516961	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9507	False	NA	-4	True	AATAAA	-17	NA	6969640	6965278	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6965477_6965556_6965644_6966790_6966953_6967048_6967234_6968085_6968180_6969526
ENSMUST00000179142.2	chr19	+	736	4	FSM	ENSMUSG00000038274.14	ENSMUST00000179142.2	736	4	0	0	0	0	multi-exon	FALSE	canonical	3	14010	junction_2	399.82023738453	25012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTCTTCATTTGTAA	1105	False	NA	9	True	AATAAA	-21	NA	6107996	6109554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUST00000179163.3	chr17	-	3340	9	FSM	ENSMUSG00000024142.16	ENSMUST00000179163.3	3340	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	23.0813777751676	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9587	False	NA	0	True	AATAAA	-17	NA	24698052	24692524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697433_24697985
ENSMUST00000179175.3	chr4	+	2953	4	FSM	ENSMUSG00000056300.15	ENSMUST00000179175.3	2953	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	159.826989794173	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	146599376	146623852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_146599500_146616526_146616611_146619877_146620005_146621233
ENSMUST00000179233.2	chr8	-	1423	9	FSM	ENSMUSG00000008892.13	ENSMUST00000179233.2	1423	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	726.253560662528	6970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTAGTAGTGGTTGGT	NA	False	NA	0	True	AATAAA	-33	NA	23083829	23067090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077565_23077619_23078741_23078811_23083699
ENSMUST00000179238.8	chr10	+	2657	15	FSM	ENSMUSG00000004207.15	ENSMUST00000179238.8	2657	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	365.052281690372	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGGCCTTGTGTCTCT	6990	False	NA	NA	False	AATAAA	-16	NA	60113449	60138376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60133316_60133326_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUST00000179243.3	chr7	-	2142	9	FSM	ENSMUSG00000039194.17	ENSMUST00000179243.3	2142	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	4.45638586749397	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTTTCATGATGAACTT	NA	False	NA	-15	True	AATAAA	-22	NA	79036796	79024617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_79025467_79025644_79025756_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033711_79034406_79034528_79036436
ENSMUST00000179263.2	chr12	-	525	2	FSM	ENSMUSG00000091931.6	ENSMUST00000179263.2	525	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCCACTGTTGTTACAT	6359	False	NA	NA	False	NA	NA	NA	102724062	102722539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_102722802_102723799
ENSMUST00000179290.8	chr4	-	1721	2	FSM	ENSMUSG00000045268.14	ENSMUST00000179290.8	1721	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGTGTACTTATTTGG	NA	False	NA	-1	True	AGTAAA	-16	NA	119031053	119026712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_119028240_119030859
ENSMUST00000179301.8	chr13	-	2503	21	FSM	ENSMUSG00000009470.18	ENSMUST00000179301.8	2503	21	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_20	72.2616599587914	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGATTCAGCATTC	NA	False	NA	NA	False	NA	NA	NA	99027506	98985730	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ENSMUST00000179323.2	chr4	+	808	2	FSM	ENSMUSG00000050188.9	ENSMUST00000179323.2	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTCTGTGCCTGATGCC	NA	False	NA	27	True	CATAAA	-18	NA	125990445	125992374	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_125990501_125991621
ENSMUST00000179324.2	chr13	+	2764	3	FSM	ENSMUSG00000078952.10	ENSMUST00000179324.2	2764	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	70.5	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619208	97633515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_97619286_97619456_97619541_97630912
ENSMUST00000179347.3	chr8	+	1149	4	FSM	ENSMUSG00000095026.3	ENSMUST00000179347.3	1149	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	14.4299072146089	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTAAAGTCTCACGATT	NA	False	NA	NA	False	CATAAA	-1	NA	71171191	71175281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71171282_71173068_71173378_71174425_71174587_71174692
ENSMUST00000179348.8	chrX	+	2028	7	FSM	ENSMUSG00000094885.8	ENSMUST00000179348.8	2028	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	5.58022301426107	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTGTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	147857277	147921148	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_147857370_147898081_147898208_147898926_147899007_147902668_147903628_147912815_147912898_147913703_147913754_147920509
ENSMUST00000179353.8	chr1	+	3219	13	FSM	ENSMUSG00000116048.2	ENSMUST00000179353.8	3219	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	266.051999929838	3281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406714	93437455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_93406791_93416849_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUST00000179365.8	chr6	+	2464	7	FSM	ENSMUSG00000038301.16	ENSMUST00000179365.8	2464	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	112.931272118144	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAACTTTGTTCGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	51521502	51567650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_51521630_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ENSMUST00000179418.9	chr17	-	481	5	FSM	ENSMUSG00000024309.16	ENSMUST00000179418.9	481	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	500.831808095293	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCCTACTTTACAGCCA	NA	False	NA	-19	True	AATAAA	-13	NA	34159284	34157896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997_34159080_34159270
ENSMUST00000179422.8	chr9	-	1462	8	FSM	ENSMUSG00000066839.13	ENSMUST00000179422.8	1462	8	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_7	78.0418516710419	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5921	False	NA	-9	True	AATAAA	-15	NA	21996698	21983541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21996644
ENSMUST00000179478.8	chr6	+	956	4	FSM	ENSMUSG00000042079.14	ENSMUST00000179478.8	956	4	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	2053.14430948133	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGACAGGCCTGGCACAG	NA	False	NA	NA	False	NA	NA	NA	117893941	117901343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_117894033_117894430_117894560_117896059_117896121_117900668
ENSMUST00000179488.3	chr14	-	754	3	FSM	ENSMUSG00000096001.3	ENSMUST00000179488.3	754	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	2.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGAGCATCCTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	36832058	36824098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_36824649_36829330_36829412_36831935
ENSMUST00000179489.8	chr7	+	3608	20	FSM	ENSMUSG00000038563.15	ENSMUST00000179489.8	3608	20	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	25.8006420500325	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCGTTTGTTTAATTAAT	NA	False	NA	38	True	AATAAA	-43	NA	82297821	82427060	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ENSMUST00000179498.2	chr4	+	434	5	FSM	ENSMUSG00000078773.12	ENSMUST00000179498.2	434	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	99.672902536246	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCACAAGAAGAGGAAGCT	-25	True	NA	NA	False	AAGAAA	-13	NA	11558921	11593653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11583676_11583723_11593620
ENSMUST00000179554.3	chr17	-	771	5	FSM	ENSMUSG00000095677.3	ENSMUST00000179554.3	771	5	0	0	0	0	multi-exon	FALSE	canonical	3	5415	junction_4	1216.82506959711	31900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6923299	6916336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_6916737_6917085_6917164_6917501_6917626_6920709_6920752_6923172
ENSMUST00000179555.8	chr5	-	6816	3	FSM	ENSMUSG00000046572.11	ENSMUST00000179555.8	6816	3	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	31	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTCATTTCGGA	NA	False	NA	-3	True	AATAAA	-18	NA	38842169	38825826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_38832197_38839827_38840126_38842021
ENSMUST00000179569.3	chr17	+	771	5	FSM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	0	0	0	0	multi-exon	TRUE	canonical	3	3024	junction_1	2440.4692555941	22926	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6697510	6703695	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_6697638_6699278_6699321_6702406_6702531_6702868_6702947_6703295
ENSMUST00000179574.2	chr9	+	3211	3	FSM	ENSMUSG00000033491.14	ENSMUST00000179574.2	3211	3	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	10.5	2476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGTTGTTTTCTATT	NA	False	NA	NA	False	AATAAA	-16	NA	86625701	86640325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_86625860_86637210_86639599_86639660
ENSMUST00000179600.8	chrX	-	1650	9	FSM	ENSMUSG00000058328.14	ENSMUST00000179600.8	1650	9	0	0	0	0	multi-exon	TRUE	canonical	3	263	junction_8	84.6742840241357	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTTCAGCACATATG	NA	False	NA	NA	False	ATTAAA	-14	NA	72336582	72151240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72336481
ENSMUST00000179619.9	chr8	+	3616	14	FSM	ENSMUSG00000031785.17	ENSMUST00000179619.9	3616	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	9.58857801774418	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTGGGTTTGTCT	679	False	NA	46	True	NA	NA	NA	95703734	95740845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_95704046_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
ENSMUST00000179636.3	chr10	+	3543	12	FSM	ENSMUSG00000019894.15	ENSMUST00000179636.3	3543	12	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	32.2574867983458	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGTTCGTGTCCCTCATT	NA	False	NA	NA	False	AATAAA	-15	NA	103203668	103255236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_103204015_103224887_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUST00000179709.8	chr10	+	1814	13	FSM	ENSMUSG00000020111.16	ENSMUST00000179709.8	1814	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_12	56.6090393252997	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGCTCTGTGTCCTTTCT	NA	False	NA	25	True	NA	NA	NA	59538439	59699952	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59697384_59697475_59699000_59699397_59699881
ENSMUST00000179781.8	chr10	+	1261	7	FSM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	0	0	0	0	multi-exon	FALSE	canonical	3	6175	junction_5	429.072416835304	8536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	21	True	AATAAA	-15	NA	79540324	79547803	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ENSMUST00000179820.2	chr19	-	2965	2	FSM	ENSMUSG00000094936.9	ENSMUST00000179820.2	2965	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAATGTTATTTACCTG	NA	False	NA	-11	True	NA	NA	NA	4843911	4840095	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4842849_4843699
ENSMUST00000179852.9	chr13	-	1246	8	FSM	ENSMUSG00000021368.16	ENSMUST00000179852.9	1246	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_7	48.9393627307283	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCGTGGCCATGATG	NA	False	NA	-17	True	AGTAAA	-16	NA	43324960	43305215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
ENSMUST00000179857.3	chr8	-	4902	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	0	0	0	0	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	10317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTCTTTCTATTTCA	NA	False	NA	-3	True	NA	NA	NA	127672590	127657416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ENSMUST00000179869.3	chr13	+	3245	10	FSM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_1	79.8526420630178	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTCTTTGAGTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	120151981	120169618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_120152050_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ENSMUST00000179954.8	chr1	+	630	4	FSM	ENSMUSG00000073702.12	ENSMUST00000179954.8	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	8615	junction_3	1758.8270712798	73893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGGGTTTGGTTTTCCT	NA	False	NA	25	True	AATAAA	-14	NA	39407009	39410446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_39407337_39409094_39409221_39410034_39410148_39410382
ENSMUST00000179990.8	chr10	+	566	4	FSM	ENSMUSG00000020022.18	ENSMUST00000179990.8	566	4	0	0	0	0	multi-exon	FALSE	canonical	3	3293	junction_3	309.018877524767	13585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTCTTGTGCGTTCA	NA	False	NA	13	True	ATTAAA	-13	NA	94034865	94056810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_94034993_94035811_94035895_94039149_94039238_94056542
ENSMUST00000180014.2	chr4	+	1938	3	FSM	ENSMUSG00000058186.14	ENSMUST00000180014.2	1938	3	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_2	38.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGACAAATGCTTTACCC	NA	False	NA	NA	False	NA	NA	NA	145422730	145429210	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_145422806_145425813_145425941_145427474
ENSMUST00000180020.8	chr6	+	2280	3	FSM	ENSMUSG00000042079.14	ENSMUST00000180020.8	2280	3	0	0	0	0	multi-exon	FALSE	canonical	3	4878	junction_1	99	4854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	NA	False	NA	NA	False	AATAAA	-16	NA	117894254	117902582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_117894560_117896059_117896121_117900668
ENSMUST00000180025.8	chrX	+	2812	5	FSM	ENSMUSG00000072964.15	ENSMUST00000180025.8	2812	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	89.3168517134365	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTGTTTGTGTATA	NA	False	NA	7	True	AATAAA	-18	NA	134786599	134791827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_134786837_134787593_134787676_134788009_134788067_134789120_134789229_134789499
ENSMUST00000180036.8	chr10	+	1044	6	FSM	ENSMUSG00000035242.16	ENSMUST00000180036.8	1044	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2881.68367452085	26825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	False	NA	19	True	AATAAA	-19	NA	80662519	80665124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_80662740_80664070_80664129_80664129_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUST00000180043.8	chr17	+	1447	7	FSM	ENSMUSG00000040482.17	ENSMUST00000180043.8	1447	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	19.7434940057619	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCTGTGTCTGAATG	2976	False	NA	30	True	AATAAA	-19	NA	35055994	35058162	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_35056193_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
ENSMUST00000180077.7	chr17	+	602	5	FSM	ENSMUSG00000062691.11	ENSMUST00000180077.7	602	5	0	0	0	0	multi-exon	FALSE	canonical	3	686	junction_1	395.694563394546	3893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTGTGGGTCTGCAG	NA	False	NA	NA	False	AATAAA	-22	NA	79223928	79227735	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_79223955_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ENSMUST00000180088.2	chr11	+	1921	9	FSM	ENSMUSG00000034412.14	ENSMUST00000180088.2	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_8	26.2963875846094	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGCTGTGTATAGTTAG	1582	False	NA	21	True	AATAAA	-12	NA	4136821	4165502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
ENSMUST00000180095.4	chr6	+	1475	9	FSM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	0	0	0	0	multi-exon	FALSE	canonical	3	3449	junction_8	252.103029533562	2359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATTCTGGCTGTACTT	NA	False	NA	27	True	AATAAA	-17	NA	124908394	124913108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912585
ENSMUST00000180140.8	chr17	+	693	4	FSM	ENSMUSG00000023904.11	ENSMUST00000180140.8	693	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	183.637928786209	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCAGCAGCCTTTGG	NA	False	NA	11	True	AATAAA	-19	NA	23892569	23894201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_23892678_23892942_23893043_23893508_23893650_23893857
ENSMUST00000180159.8	chr15	+	489	4	FSM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_3	234.864973028239	5696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCATTTCTATTCAATGT	109	False	NA	NA	False	ATTAAA	-12	NA	36174155	36177153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_36174228_36175132_36175203_36175529_36175623_36176899
ENSMUST00000180180.8	chr9	-	1676	9	FSM	ENSMUSG00000066839.13	ENSMUST00000180180.8	1676	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_8	49.2772767104677	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5885	False	NA	-9	True	AATAAA	-15	NA	21996734	21983541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996652
ENSMUST00000180248.8	chr19	-	2610	4	FSM	ENSMUSG00000094936.9	ENSMUST00000180248.8	2610	4	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_3	29.8923996285938	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGTCTTGGGTGAC	NA	False	NA	NA	False	AATAAA	-13	NA	4843929	4834320	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843699
ENSMUST00000180278.2	chr4	+	2792	11	FSM	ENSMUSG00000028550.16	ENSMUST00000180278.2	2792	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	10.6155546251715	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACACTTTTGTTTTGG	NA	False	NA	9	True	NA	NA	NA	99082383	99148020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_99082521_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
ENSMUST00000180283.2	chr17	-	2368	9	FSM	ENSMUSG00000012296.17	ENSMUST00000180283.2	2368	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	136.842461885922	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAATCCCCTTTTTGCT	5806	False	NA	-7	True	AATAAA	-41	NA	46593952	46568776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593885
ENSMUST00000180286.2	chr2	-	1531	4	FSM	ENSMUSG00000027341.11	ENSMUST00000180286.2	1531	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	263.641591728029	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	4889	False	NA	-4	True	TATAAA	-18	NA	132089708	132081413	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089552
ENSMUST00000180339.8	chr9	-	2756	9	FSM	ENSMUSG00000031938.16	ENSMUST00000180339.8	2756	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	7.58184509206037	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTCTTTTCTTTCAT	NA	False	NA	-5	True	AATAAA	-17	NA	15217744	15194632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_15196288_15198651_15198769_15201962_15202113_15203295_15203473_15205727_15205830_15205981_15206056_15209138_15209238_15212662_15212810_15217509
ENSMUST00000180341.2	chr6	+	1922	1	FSM	ENSMUSG00000042079.14	ENSMUST00000180341.2	1922	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1375	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	204	False	NA	NA	False	AATAAA	-17	NA	117900661	117902583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_117900700_117902600
ENSMUST00000180359.8	chr14	+	2508	7	FSM	ENSMUSG00000040997.15	ENSMUST00000180359.8	2508	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	134.648616777151	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAGTATTAACTCCTGG	NA	False	NA	-78	True	TATAAA	-16	NA	54491644	54506532	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_54491929_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ENSMUST00000180365.9	chr9	-	2014	9	FSM	ENSMUSG00000032182.16	ENSMUST00000180365.9	2014	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	18.6463803457937	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTCACGCCCATGGTG	6086	False	NA	-20	True	AATAAA	-13	NA	21504106	21499981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
ENSMUST00000180419.2	chr9	+	1415	3	FSM	ENSMUSG00000096981.3	ENSMUST00000180419.2	1415	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATTCATCTATGTGAA	NA	False	NA	4	True	AATAAA	-12	NA	21982327	21997418	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_21982461_21987545_21987648_21996238
ENSMUST00000180422.2	chr13	+	955	1	FSM	ENSMUSG00000097906.2	ENSMUST00000180422.2	955	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCGCCAAAGCAACCAAGT	NA	False	NA	NA	False	NA	NA	NA	67958364	67959319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_67958400_67959300
ENSMUST00000180432.9	chr15	+	1563	9	FSM	ENSMUSG00000097039.9	ENSMUST00000180432.9	1563	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.0163231161763	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTATTGAAGTCATGATT	NA	False	NA	23	True	AATAAA	-31	NA	61909895	62121373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_61910051_61978996_61979315_62021087_62021202_62031845_62031978_62047315_62047398_62114022_62114151_62114282_62114411_62116567_62116707_62121006
ENSMUST00000180530.3	chr18	-	1269	2	FSM	ENSMUSG00000097666.3	ENSMUST00000180530.3	1269	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGGATTCTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	77820439	77817195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_77818179_77820153
ENSMUST00000180563.10	chr9	-	947	4	FSM	ENSMUSG00000097195.11	ENSMUST00000180563.10	947	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	498.70855439046	2697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403502_88403702_88403770_88404359_88404435_88404536
ENSMUST00000180596.2	chr1	+	358	3	FSM	ENSMUSG00000097398.3	ENSMUST00000180596.2	358	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	1	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATTAAAGTTGAACCTT	NA	False	NA	-10	True	NA	NA	NA	88682675	88683431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_88682774_88682928_88683013_88683255
ENSMUST00000180765.2	chr19	-	1073	6	FSM	ENSMUSG00000037349.10	ENSMUST00000180765.2	1073	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	58.0427428710946	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTTAGCTTCTGCTGCT	6965	False	NA	-3	True	AATAAA	-17	NA	6973485	6970385	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6972138_6972609_6973104_6973382
ENSMUST00000180777.3	chr13	-	672	3	FSM	ENSMUSG00000097326.3	ENSMUST00000180777.3	672	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	5	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTTGTATGTGTGATA	NA	False	NA	1	True	ATTAAA	-15	NA	48427360	48425888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_48426292_48426385_48426533_48427238
ENSMUST00000180879.8	chr7	+	725	4	FSM	ENSMUSG00000097277.8	ENSMUST00000180879.8	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	29.9777695412228	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAATTTTTTGGGTAT	NA	False	NA	4	True	AATAAA	-9	NA	81173318	81181242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_81173425_81178534_81178689_81179094_81179276_81180958
ENSMUST00000180923.2	chr16	-	737	2	FSM	ENSMUSG00000097318.3	ENSMUST00000180923.2	737	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGGAATTCTCTCCTT	NA	False	NA	-3	True	ATTAAA	-15	NA	33201097	33200224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_33200750_33200885
ENSMUST00000180967.3	chr16	-	1580	2	FSM	ENSMUSG00000097768.3	ENSMUST00000180967.3	1580	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACACCTTTAAATAATA	6571	False	NA	NA	False	AATAAA	-28	NA	93591789	93589023	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_93590271_93591456
ENSMUST00000180974.2	chr9	+	1444	4	FSM	ENSMUSG00000097574.3	ENSMUST00000180974.2	1444	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0.471404520791032	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTTGGGATTTCTTTT	NA	False	NA	3	True	AATAAA	-14	NA	78083195	78086161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_78083318_78083852_78084025_78084280_78084376_78085106
ENSMUST00000180987.2	chr14	-	1554	3	FSM	ENSMUSG00000097577.3	ENSMUST00000180987.2	1554	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTAGGCTCTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	20753080	20737303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_20738682_20738832_20738908_20752979
ENSMUST00000181016.3	chr1	+	479	3	FSM	ENSMUSG00000097398.3	ENSMUST00000181016.3	479	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGTCTTGGCTCCTT	NA	False	NA	17	True	NA	NA	NA	88682611	88683458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_88682681_88682805_88683013_88683255
ENSMUST00000181036.2	chr10	+	1197	2	FSM	ENSMUSG00000090854.10	ENSMUST00000181036.2	1197	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACGCCGCTGATGACTGA	NA	False	NA	NA	False	AATAAA	-45	NA	104030317	104032383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_104030363_104031231
ENSMUST00000181045.8	chr5	+	3967	4	FSM	ENSMUSG00000097908.8	ENSMUST00000181045.8	3967	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	24.0878023535196	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCAGCCTCGCTTTTTT	NA	False	NA	24	True	AATAAA	-13	NA	136947999	136965960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_136948286_136951160_136951282_136954557_136954750_136962592
ENSMUST00000181091.8	chr10	-	1876	11	FSM	ENSMUSG00000036112.16	ENSMUST00000181091.8	1876	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	660.841047453924	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGATACATTTTAATGT	NA	False	NA	-17	True	AATAAA	-15	NA	93725637	93696790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715436_93715934_93716001_93722855_93722964_93725399
ENSMUST00000181159.8	chr8	+	682	4	FSM	ENSMUSG00000097248.10	ENSMUST00000181159.8	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	80.2509951478623	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTCCATTCCTCCT	198	False	NA	7	True	AATAAA	-15	NA	88199439	88252182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_88199589_88248363_88248442_88250923_88251056_88251859
ENSMUST00000181190.3	chr5	+	4058	5	FSM	ENSMUSG00000097908.8	ENSMUST00000181190.3	4058	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.889017923921	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGCTTTTTTGTTTTG	NA	False	NA	30	True	AATAAA	-19	NA	136948254	136965966	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_136948286_136949284_136949625_136951160_136951282_136954557_136954750_136962592
ENSMUST00000181217.8	chr10	-	1984	11	FSM	ENSMUSG00000036112.16	ENSMUST00000181217.8	1984	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	666.978530389097	5662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGATACATTTTAATGT	NA	False	NA	-17	True	AATAAA	-15	NA	93725646	93696790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715535_93715934_93716001_93722855_93722964_93725399
ENSMUST00000181225.2	chr6	+	1499	3	FSM	ENSMUSG00000097616.8	ENSMUST00000181225.2	1499	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3.5	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTGTTATGGATGATAG	28	False	NA	NA	False	AATAAA	-22	NA	13871567	13896421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_13871627_13881271_13881381_13895090
ENSMUST00000181233.2	chr12	+	438	1	FSM	ENSMUSG00000096942.2	ENSMUST00000181233.2	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9006	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGATGCTGGGTTAA	NA	False	NA	NA	False	NA	NA	NA	110864547	110864985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_110864500_110865000
ENSMUST00000181253.10	chr12	+	2368	11	FSM	ENSMUSG00000097451.12	ENSMUST00000181253.10	2368	11	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_3	76.4947056991528	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2865	False	NA	NA	False	NA	NA	NA	109612563	109628143	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ENSMUST00000181391.8	chr13	+	2399	4	FSM	ENSMUSG00000030446.18	ENSMUST00000181391.8	2399	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	7.58653778449403	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGATTAGTATTGCATT	NA	False	NA	NA	False	AATAAA	-17	NA	67961858	67975121	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_67962016_67970359_67970487_67971218_67971315_67973102
ENSMUST00000181489.3	chr1	+	3849	2	FSM	ENSMUSG00000097814.6	ENSMUST00000181489.3	3849	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATCATCTCTATTATTT	NA	False	NA	5	True	NA	NA	NA	96799945	96808959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_96800394_96805558
ENSMUST00000181492.2	chr7	+	720	4	FSM	ENSMUSG00000097277.8	ENSMUST00000181492.2	720	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	41.0446910899164	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTTTGGGTATTATG	NA	False	NA	8	True	AATAAA	-13	NA	81178539	81181246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_81178689_81178904_81179007_81179094_81179276_81180958
ENSMUST00000181516.2	chr13	-	1094	3	FSM	ENSMUSG00000097483.3	ENSMUST00000181516.2	1094	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	24	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGAACTGTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	66667587	66651223	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_66652035_66653161_66653268_66667410
ENSMUST00000181573.2	chr13	-	382	2	FSM	ENSMUSG00000097333.8	ENSMUST00000181573.2	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCTATTTGGTTTGTT	9222	False	NA	NA	False	AATAAA	-20	NA	67674296	67669157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67669439_67674195
ENSMUST00000181586.8	chr8	+	765	5	FSM	ENSMUSG00000031818.13	ENSMUST00000181586.8	765	5	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	3735.25865904893	42980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121394960	121400946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_121395115_121396047_121396122_121399463_121399632_121399959_121400092_121400709
ENSMUST00000181606.2	chr10	+	964	6	FSM	ENSMUSG00000097053.2	ENSMUST00000181606.2	964	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0.8	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGATGGCCGACAGAGCC	NA	False	NA	NA	False	NA	NA	NA	22100178	22129718	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_22100267_22116417_22116673_22117008_22117282_22127849_22127968_22128770_22128854_22129571
ENSMUST00000181615.8	chr10	+	1258	2	FSM	ENSMUSG00000090854.10	ENSMUST00000181615.8	1258	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACGCCGCTGATGACTGA	NA	False	NA	NA	False	AATAAA	-45	NA	104029902	104032383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_104030009_104031231
ENSMUST00000181645.8	chr10	+	1579	9	FSM	ENSMUSG00000053219.16	ENSMUST00000181645.8	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	39.8708853676464	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	False	NA	5	True	AATAAA	-15	NA	22034467	22059816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_22034618_22047902_22048001_22049079_22049150_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ENSMUST00000181657.9	chr15	+	2798	7	FSM	ENSMUSG00000097039.9	ENSMUST00000181657.9	2798	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	10.714735440297	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTAAGCGTGATTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	61909909	62122822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_61910051_61978996_61979361_62047315_62047398_62114022_62114151_62114282_62114411_62116567_62116707_62121006
ENSMUST00000181658.2	chr17	-	1179	5	FSM	ENSMUSG00000097624.3	ENSMUST00000181658.2	1179	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	9.14808723176599	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGTCTCTTTTCTTTCT	NA	False	NA	-8	True	GATAAA	-12	NA	15461045	15451846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_15452674_15453041_15453145_15454190_15454265_15460531_15460624_15460962
ENSMUST00000181742.2	chr13	+	1723	2	FSM	ENSMUSG00000097848.3	ENSMUST00000181742.2	1723	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACGACTGGTCTTTAGC	6940	False	NA	NA	False	NA	NA	NA	99237213	99244088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_99237334_99242485
ENSMUST00000181767.8	chr13	-	2656	4	FSM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	7.71722460186015	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGGTCATAGTGTTTA	9222	False	NA	NA	False	NA	NA	NA	67674296	67663899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67666232_67668744_67668841_67669311_67669439_67674195
ENSMUST00000181833.2	chr3	-	986	2	FSM	ENSMUSG00000097639.3	ENSMUST00000181833.2	986	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCTCCAAATCCTGAA	NA	False	NA	-3	True	NA	NA	NA	41447627	41443238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_41444172_41447574
ENSMUST00000181873.8	chr5	-	626	5	FSM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_4	12.3389626792531	1915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTAGAATGTTGTGTT	NA	False	NA	-7	True	AATAAA	-31	NA	100577394	100568700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100577184
ENSMUST00000181948.2	chr8	+	766	4	FSM	ENSMUSG00000031812.17	ENSMUST00000181948.2	766	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	1182.02096240107	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTGCCAATAAAAAGATCAA	9968	False	NA	-7	True	AATAAA	-19	NA	122317222	122323751	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_122317304_122320228_122320390_122322724_122322832_122323334
ENSMUST00000181960.3	chr16	+	574	3	FSM	ENSMUSG00000097290.10	ENSMUST00000181960.3	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	32	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGTTGAAAGGTCCATG	NA	False	NA	30	True	AATAAA	-35	NA	21613111	21627790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_21613197_21614599_21614726_21627427
ENSMUST00000181965.2	chr10	-	283	1	FSM	ENSMUSG00000097586.2	ENSMUST00000181965.2	283	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCTGAAGTTGGACAAAAA	NA	False	NA	NA	False	NA	NA	NA	22157635	22157352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_22157400_22157600
ENSMUST00000181967.3	chr9	+	843	3	FSM	ENSMUSG00000097651.3	ENSMUST00000181967.3	843	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	1.5	331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGGCTGATACTTGCT	NA	False	NA	16	True	NA	NA	NA	58362404	58376918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_58362640_58374083_58374201_58376427
ENSMUST00000181986.8	chr9	-	2066	16	FSM	ENSMUSG00000032582.15	ENSMUST00000181986.8	2066	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	99.8488635666704	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAATTTTGTTAAAGT	7571	False	NA	NA	False	AATAAA	-14	NA	107749962	107650765	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107737547_107737659_107749847
ENSMUST00000181995.8	chr10	-	799	8	FSM	ENSMUSG00000038510.13	ENSMUST00000181995.8	799	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	422.287550740256	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGAAGCGACCTGCAGA	6590	False	NA	18	True	AATGAA	-5	NA	40122999	40099808	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40120580_40120714_40122948
ENSMUST00000182000.2	chr8	+	427	1	FSM	ENSMUSG00000097987.2	ENSMUST00000182000.2	427	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGACAATGGAAACACA	1249	False	NA	NA	False	AAGAAA	-19	NA	122308503	122308930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_122308500_122308900
ENSMUST00000182029.8	chr10	+	3825	19	FSM	ENSMUSG00000069601.15	ENSMUST00000182029.8	3825	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_18	22.7009544586419	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATGCAGATGTATATA	NA	False	NA	15	True	AATAAA	-20	NA	69761634	69851635	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851400
ENSMUST00000182047.2	chr5	+	2944	8	FSM	ENSMUSG00000029110.14	ENSMUST00000182047.2	2944	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1054.04635300622	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGAACTAAGTATCTTT	NA	False	NA	13	True	AATAAA	-3	NA	34494275	34510768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_34494442_34499865_34500024_34504118_34504246_34506007_34506088_34506893_34506904_34507255_34507416_34508133_34508183_34508574
ENSMUST00000182066.8	chr18	-	4506	16	FSM	ENSMUSG00000041225.17	ENSMUST00000182066.8	4506	16	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_14	41.3229019095008	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTTTTTTTGT	NA	False	NA	7	True	NA	NA	NA	6112363	6024426	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6111684
ENSMUST00000182111.8	chr7	-	585	3	FSM	ENSMUSG00000051811.15	ENSMUST00000182111.8	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_1	77.5	3405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756022	4754790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_4754975_4755059_4755161_4755722
ENSMUST00000182145.3	chr8	+	1402	1	FSM	ENSMUSG00000098211.3	ENSMUST00000182145.3	1402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAGGGTCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	122268818	122270220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_122268800_122270200
ENSMUST00000182174.8	chr8	+	498	4	FSM	ENSMUSG00000097248.10	ENSMUST00000182174.8	498	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	31.0590834807897	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGTGTGTCCATTCCTCC	198	False	NA	6	True	AATAAA	-14	NA	88199439	88252181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_88199589_88248363_88248442_88250923_88251056_88252042
ENSMUST00000182183.8	chr10	+	838	7	FSM	ENSMUSG00000020056.17	ENSMUST00000182183.8	838	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	103.215658803411	1821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGGTTTGTTGACCAA	NA	False	NA	13	True	AATAAA	-16	NA	88037013	88081868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055114_88055223_88070255_88070321_88081617
ENSMUST00000182209.8	chr17	+	1977	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	0	0	0	0	multi-exon	FALSE	canonical	3	3602	junction_2	267.432701814868	2007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47904394	47910614	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUST00000182213.8	chr18	-	4162	20	FSM	ENSMUSG00000041225.17	ENSMUST00000182213.8	4162	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	53.935942307298	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAATGTGCGTTTTAGTT	-13	True	NA	-3	True	AATAAA	-34	NA	6135960	6025196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6056978_6056994_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ENSMUST00000182229.8	chr7	+	732	4	FSM	ENSMUSG00000046056.16	ENSMUST00000182229.8	732	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6.94422221866655	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGCTCACTGTGCTTCT	8674	False	NA	22	True	AATAAA	-24	NA	30450895	30455559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30451341_30454233_30454306_30454426_30454472_30455389
ENSMUST00000182232.9	chr9	-	826	6	FSM	ENSMUSG00000097195.11	ENSMUST00000182232.9	826	6	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_2	292.278634183205	11659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCAATTCTTTTTGTG	NA	False	NA	-7	True	AATAAA	-40	NA	88405027	88403102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404640_88404903
ENSMUST00000182269.8	chr10	+	4411	25	FSM	ENSMUSG00000069601.15	ENSMUST00000182269.8	4411	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	42.5675729151767	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGGAAAAAAAAATAACTATA	NA	False	NA	NA	False	AATGAA	-12	NA	69761602	69860712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_69762022_69763524_69763649_69765276_69765289_69768238_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69817992_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69842632_69842684_69844607_69844695_69849801_69849886_69850019_69850077_69851397_69851484_69859661
ENSMUST00000182276.2	chr19	-	4066	10	FSM	ENSMUSG00000025077.15	ENSMUST00000182276.3	4087	10	21	0	21	0	multi-exon	FALSE	canonical	3	30	junction_9	50.5063252364383	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGCATATTTGGATGGG	7995	False	NA	-10	True	AATAAA	-18	NA	56536654	56517600	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536618
ENSMUST00000182277.2	chr6	-	482	2	FSM	ENSMUSG00000057666.19	ENSMUST00000182277.2	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	9736	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGCCGAGAATGGGAAG	NA	False	NA	NA	False	NA	NA	NA	125142566	125140250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_125140400_125142233
ENSMUST00000182328.8	chr7	-	1391	7	FSM	ENSMUSG00000030591.18	ENSMUST00000182328.8	1391	7	0	0	0	0	multi-exon	FALSE	canonical	3	1581	junction_5	143.933626678719	5423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGTGTATCCAGTCTG	NA	False	NA	-10	True	AATAAA	-15	NA	28879977	28873612	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
ENSMUST00000182371.8	chr9	-	2986	24	FSM	ENSMUSG00000032580.13	ENSMUST00000182371.8	2986	24	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_19	139.730783549852	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTTCCTGTGTCTTTA	9721	False	NA	-6	True	AAGAAA	-12	NA	107648179	107617698	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ENSMUST00000182402.8	chr17	+	1275	10	FSM	ENSMUSG00000098090.9	ENSMUST00000182402.8	1275	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	42.4223328093547	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTGGGTGTCCCCTCC	NA	False	NA	NA	False	AATAAA	-11	NA	95057527	95082557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_95057661_95062638_95062734_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95071353_95074284_95074376_95078561_95078667_95079284_95079389_95082319
ENSMUST00000182405.9	chr14	+	6977	17	FSM	ENSMUSG00000021767.20	ENSMUST00000182405.9	6977	17	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	51.5338177801723	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCGTGTCCTGTCATG	NA	False	NA	10	True	AATAAA	-20	NA	21549852	21722201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_21550029_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUST00000182421.8	chr9	-	1704	18	FSM	ENSMUSG00000032580.13	ENSMUST00000182421.8	1704	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	166.009379815874	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAAGAGCAAAACTGCTC	9750	False	NA	18	True	AAGAAA	-6	NA	107648150	107623242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642846_107644741_107644908_107646759_107646826_107648083
ENSMUST00000182498.8	chr1	-	559	3	FSM	ENSMUSG00000098234.8	ENSMUST00000182498.8	559	3	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_2	159	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTGTGGGCAGTAATT	NA	False	NA	-15	True	AATAAA	-12	NA	10014328	10012249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_10012617_10012834_10012943_10014244
ENSMUST00000182532.8	chr3	+	2059	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182532.8	2059	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	163.233149894529	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGCACTGGCTGTGTC	NA	False	NA	39	True	AATAAA	-41	NA	68375515	68533814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_68375563_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUST00000182559.8	chr18	-	4265	19	FSM	ENSMUSG00000041225.17	ENSMUST00000182559.8	4265	19	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_11	38.5140666943045	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	NA	False	NA	-23	True	AATAAA	-14	NA	6136098	6025216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ENSMUST00000182580.8	chr1	-	473	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	0	0	0	0	multi-exon	TRUE	canonical	3	370	junction_3	129.892263049036	6548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGGACTTTTTGTCAAT	NA	False	NA	1	True	AATAAA	-15	NA	10014343	10012183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_10012381_10012547_10012617_10012834_10012943_10014244
ENSMUST00000182602.2	chr5	-	733	3	FSM	ENSMUSG00000029551.14	ENSMUST00000182602.2	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	75.5	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGGCCTTCTCAGTG	7355	False	NA	-33	True	AATAAA	-10	NA	139812598	139809367	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_139809829_139811882_139812120_139812563
ENSMUST00000182603.2	chr17	+	4315	6	FSM	ENSMUSG00000061544.14	ENSMUST00000182603.2	4315	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	78.2932947320522	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGACTTGTATCATAGT	NA	False	NA	12	True	AATAAA	-26	NA	21954892	21967950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_21954917_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ENSMUST00000182709.8	chr5	+	3046	8	FSM	ENSMUSG00000029110.14	ENSMUST00000182709.8	3046	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	927.964241042219	3704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCATTTATTCAGTTAT	NA	False	NA	28	True	AATAAA	-18	NA	34493632	34510783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34506893_34506904_34507255_34507416_34508133_34508183_34508574
ENSMUST00000182714.2	chr19	-	690	2	FSM	ENSMUSG00000042694.18	ENSMUST00000182714.2	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCTGGGCTACATAAGA	NA	False	NA	NA	False	NA	NA	NA	47525485	47524353	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_47524811_47525252
ENSMUST00000182719.8	chr3	+	2156	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	72.6321455791344	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGTCCTTTTGCTCACTA	NA	False	NA	21	True	AATAAA	-23	NA	68401540	68533796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_68401703_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUST00000182738.8	chr7	-	423	4	FSM	ENSMUSG00000051811.15	ENSMUST00000182738.8	423	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	362.510076488303	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGTTTCTTTTCTCG	NA	False	NA	-11	True	AATAAA	-15	NA	4756008	4754792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_4754975_4755102_4755161_4755722_4755849_4755951
ENSMUST00000182742.2	chr1	-	400	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182742.2	400	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	223.143202649977	4544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTGTGGGCAGTAATT	NA	False	NA	-15	True	AATAAA	-12	NA	10014342	10012249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_10012375_10012547_10012617_10012834_10012943_10014244
ENSMUST00000182746.2	chr7	-	2374	9	FSM	ENSMUSG00000058447.9	ENSMUST00000182746.2	2374	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	43.1955943934101	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCCACTGTGTCCCAG	9890	False	NA	NA	False	ATTAAA	-18	NA	29789835	29755458	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29771453_29771565_29780515_29780643_29786524_29786585_29789712
ENSMUST00000182793.8	chr6	+	2459	20	FSM	ENSMUSG00000030314.17	ENSMUST00000182793.8	2459	20	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	42.1345950463867	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTGGGGCTCAGGTCCT	NA	False	NA	3	True	NA	NA	NA	114620087	114836182	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_114620112_114623897_114624019_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUST00000182811.2	chr11	+	2153	1	FSM	ENSMUSG00000086859.5	ENSMUST00000182811.2	2153	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1311	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTTTCCATTGTTCAA	894	False	NA	19	True	AATAAA	-15	NA	116967627	116969780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116967600_116969800
ENSMUST00000182855.8	chr14	+	6791	17	FSM	ENSMUSG00000021767.20	ENSMUST00000182855.8	6791	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	51.8893052564784	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAACAAAAGC	NA	False	NA	-52	True	NA	NA	NA	21549837	21722139	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_21549890_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUST00000182872.4	chr9	-	1145	3	FSM	ENSMUSG00000097195.11	ENSMUST00000182872.4	1145	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	595	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403770_88404359_88404435_88404536
ENSMUST00000182898.8	chr10	-	1852	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	1958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGAGTTGAAACTATT	NA	False	NA	2	True	AATAAA	-28	NA	59838957	59823230	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
ENSMUST00000182902.8	chr6	+	2543	21	FSM	ENSMUSG00000030314.17	ENSMUST00000182902.8	2543	21	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	41.8782759912583	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	6	True	NA	NA	NA	114620089	114836185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_114620112_114648062_114648214_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUST00000182956.8	chr15	+	1342	7	FSM	ENSMUSG00000097039.9	ENSMUST00000182956.8	1342	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.4114951790825	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAAGTCATGATTGTCA	NA	False	NA	27	True	AATAAA	-35	NA	61909834	62121377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_61910051_61978996_61979315_62047315_62047398_62047676_62047776_62114022_62114151_62114282_62114411_62121006
ENSMUST00000182980.8	chr8	+	2080	11	FSM	ENSMUSG00000002342.18	ENSMUST00000182980.8	2080	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	59.2504008425259	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	5869	False	NA	7	True	AATAAA	-17	NA	70625057	70635500	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70625091_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUST00000182996.2	chr14	+	606	2	FSM	ENSMUSG00000021767.20	ENSMUST00000182996.2	606	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATCGGTTAAACCGGG	NA	False	NA	NA	False	NA	NA	NA	21531501	21567179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_21531622_21566693
ENSMUST00000183032.8	chr9	-	3716	21	FSM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_19	71.8828734817968	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7513	False	NA	NA	False	AATAAA	-18	NA	107750020	107650761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
ENSMUST00000183037.3	chr10	+	735	6	FSM	ENSMUSG00000075706.12	ENSMUST00000183037.3	735	6	0	0	0	0	multi-exon	FALSE	canonical	3	7423	junction_4	813.086120899871	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTCACCCTGGCTGCCT	1632	False	NA	-41	True	NA	NA	NA	79890298	79892228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ENSMUST00000183044.8	chr17	+	2064	7	FSM	ENSMUSG00000034165.17	ENSMUST00000183044.8	2064	7	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_1	1825.65854937031	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47816043	47910608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_47816192_47889633_47889718_47904533_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUST00000183045.3	chr9	-	939	5	FSM	ENSMUSG00000097195.11	ENSMUST00000183045.3	939	5	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_4	231.258918746932	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403502_88403702_88404029_88404359_88404435_88404536_88404640_88404903
ENSMUST00000183146.2	chr12	+	1383	1	FSM	ENSMUSG00000098134.2	ENSMUST00000183146.2	1383	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCCTGGTGTGATCTTTC	NA	False	NA	10	True	AATAAA	-19	NA	84463969	84465352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_84464000_84465400
ENSMUST00000183196.2	chr19	-	435	1	FSM	ENSMUSG00000063754.8	ENSMUST00000183196.2	435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2715	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGACATCCCATGCACGG	9669	False	NA	NA	False	AATACA	-30	NA	28981242	28980807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_28980800_28981200
ENSMUST00000183211.8	chr15	-	2036	11	FSM	ENSMUSG00000098112.9	ENSMUST00000183211.8	2036	11	0	0	0	0	multi-exon	TRUE	canonical	2	83	junction_1	21.2593508837876	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGCCCTGAACAGCCA	NA	False	NA	1	True	AATAAA	-23	NA	100567434	100538957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_100539446_100542693_100543421_100546960_100547044_100548080_100548157_100549839_100549926_100550265_100550374_100554075_100554172_100554590_100554686_100554940_100554996_100560397_100560479_100567293
ENSMUST00000183250.2	chr13	-	929	1	FSM	ENSMUSG00000098238.2	ENSMUST00000183250.2	929	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCTGGACCACCTACC	NA	False	NA	NA	False	NA	NA	NA	97595585	97594656	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_97594700_97595600
ENSMUST00000183272.2	chr6	-	884	7	FSM	ENSMUSG00000057666.19	ENSMUST00000183272.2	884	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	3982.74732091081	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCATGGCCTACATGGCC	NA	False	NA	NA	False	AATGAA	-26	NA	125142539	125139026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140285_125142247_125142275_125142514
ENSMUST00000183309.8	chr10	-	1296	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	0	0	0	0	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	5013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATGTCACAGTGTGG	6557	False	NA	42	True	TTTAAA	-17	NA	40123032	40099422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
ENSMUST00000183363.2	chr10	-	406	3	FSM	ENSMUSG00000063320.12	ENSMUST00000183363.2	406	3	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	131	2076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGGGGGCTCAATGGC	NA	False	NA	0	True	AGTAAA	-20	NA	82459024	82455859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_82456052_82458541_82458659_82458927
ENSMUST00000183431.8	chr14	-	536	4	FSM	ENSMUSG00000095304.10	ENSMUST00000183431.8	536	4	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_3	71.4624998785299	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCTAGCCATGACCTCT	NA	False	NA	-14	True	AATAAA	-18	NA	25902898	25888827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25902704
ENSMUST00000183477.8	chr16	+	247	3	FSM	ENSMUSG00000096215.9	ENSMUST00000183477.8	247	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	21.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGAGTCTGGACTGTGTT	NA	False	NA	11	True	NA	NA	NA	4825222	4826173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_4825283_4825835_4825919_4826069
ENSMUST00000183511.2	chr9	+	775	1	FSM	ENSMUSG00000079225.4	ENSMUST00000183511.2	775	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTGATGAAGAAGGAGAT	NA	False	NA	71	True	NA	NA	NA	81559664	81560439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_81559700_81560400
ENSMUST00000183610.8	chr11	-	3006	15	FSM	ENSMUSG00000020717.20	ENSMUST00000183610.8	3006	15	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_12	484.073763142835	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	9556	False	NA	-10	True	AATAAA	-18	NA	106606088	106545043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106590417_106590712_106605727_106605755_106605844
ENSMUST00000183638.8	chr3	-	1723	11	FSM	ENSMUSG00000033439.13	ENSMUST00000183638.8	1723	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	35.5437758264369	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAATCTGAGTGTGAGGC	NA	False	NA	NA	False	AATAAA	-21	NA	116388509	116374743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382174_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ENSMUST00000183947.8	chr2	+	1437	7	FSM	ENSMUSG00000027333.19	ENSMUST00000183947.8	1437	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	49.4705299479734	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCTTCTCTCCTCAG	NA	False	NA	20	True	AATAAA	-21	NA	131333862	131367092	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362974_131363092_131363978_131364140_131366662
ENSMUST00000183971.8	chr7	-	401	4	FSM	ENSMUSG00000051811.15	ENSMUST00000183971.8	401	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	343.653895656662	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4755971	4754790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_4754975_4755089_4755161_4755722_4755849_4755951
ENSMUST00000184126.3	chr9	+	496	2	FSM	ENSMUSG00000098332.3	ENSMUST00000184126.3	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_1	0	1928	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGTTATTTATAAAGGT	NA	False	NA	NA	False	AATAAA	-19	NA	72946999	72950061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_72947148_72949713
ENSMUST00000184169.8	chr2	-	2392	17	FSM	ENSMUSG00000027010.17	ENSMUST00000184169.8	2392	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	42.1928237381667	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTCAGTTTGTTTTCC	NA	False	NA	48	True	NA	NA	NA	71197877	71105033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71174233_71174377_71196870_71196925_71197856
ENSMUST00000184181.2	chr18	+	1865	1	FSM	ENSMUSG00000098702.2	ENSMUST00000184181.2	1865	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTTGGTCAGACTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	61859460	61861325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_61859500_61861300
ENSMUST00000184205.8	chr4	+	1054	8	FSM	ENSMUSG00000028863.14	ENSMUST00000184205.8	1054	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	102.612805025016	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCATTCTCTTGTTT	NA	False	NA	-10	True	NA	NA	NA	124978956	125003507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125001444_125001503_125002115_125002150_125003091
ENSMUST00000184455.8	chr4	+	2478	9	FSM	ENSMUSG00000040410.15	ENSMUST00000184455.8	2478	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	22.7156333832011	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTCTTTGTTAAGAATC	-11	True	NA	NA	False	AATAAA	-41	NA	22357570	22434088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390713_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
ENSMUST00000184535.8	chr2	-	1358	7	FSM	ENSMUSG00000027327.17	ENSMUST00000184535.8	1358	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	320.450724241133	3449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCAGAGGTTAGCGGGG	NA	False	NA	-14	True	AATAAA	-15	NA	131001954	130988243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130991360_130991463_130993537_130993681_130995513_130995631_131001872
ENSMUST00000184678.2	chr18	+	890	2	FSM	ENSMUSG00000098702.2	ENSMUST00000184678.2	890	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGATCTCTCAGTTTGC	NA	False	NA	11	True	AATAAA	-25	NA	61859503	61868988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_61860074_61868668
ENSMUST00000184688.8	chrX	+	720	5	FSM	ENSMUSG00000079637.11	ENSMUST00000184688.8	720	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	22.1585198061603	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGCCAGACGATGTTTTG	NA	False	NA	NA	False	NA	NA	NA	36635332	36639941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36635407_36635568_36635981_36637508_36637555_36637822_36637872_36639802
ENSMUST00000184766.8	chr12	+	2250	8	FSM	ENSMUSG00000021023.15	ENSMUST00000184766.8	2250	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	146.839771068151	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCGTCAAACTCACTTTT	NA	False	NA	36	True	AATAAA	-37	NA	55350027	55429298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_55350118_55350400_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424048_55426066_55426263_55429041
ENSMUST00000184850.8	chr17	-	1072	3	FSM	ENSMUSG00000073406.11	ENSMUST00000184850.8	1072	3	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_2	90.5	6258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTATGTTTCCTGCAT	NA	False	NA	-5	True	AATAAA	-22	NA	36392879	36391006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36391216_36391890_36392008_36392133
ENSMUST00000184866.10	chrX	+	893	6	FSM	ENSMUSG00000095180.11	ENSMUST00000184866.10	893	6	0	0	0	0	multi-exon	FALSE	canonical	3	2792	junction_1	493.533626007388	16276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAGTGATTCGAGTAA	8505	False	NA	17	True	ATTAAA	-14	NA	36891635	36897308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36891707_36892583_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
ENSMUST00000184877.8	chr3	-	1575	4	FSM	ENSMUSG00000001018.16	ENSMUST00000184877.8	1575	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	310.762860643861	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAAATTTATTTTAT	NA	False	NA	-29	True	AATAAA	-20	NA	90398331	90395679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398143
ENSMUST00000184899.8	chr2	-	688	5	FSM	ENSMUSG00000098950.8	ENSMUST00000184899.8	688	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	142.676206846131	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGAGCTGAATGTTCCC	NA	False	NA	NA	False	NA	NA	NA	155953846	155921010	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_155921163_155921258_155921385_155940104_155940293_155945268_155945350_155953705
ENSMUST00000184963.8	chr3	-	1616	11	FSM	ENSMUSG00000033439.13	ENSMUST00000184963.8	1616	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	31.2251501197352	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATCTGAGTGTGAGGCT	NA	False	NA	NA	False	AATAAA	-22	NA	116388485	116374742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_116375260_116376142_116376374_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ENSMUST00000184970.9	chr19	+	4042	20	FSM	ENSMUSG00000010097.16	ENSMUST00000184970.9	4042	20	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_4	65.017278760312	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTGTGTCCCATTACT	8603	False	NA	32	True	GATAAA	-11	NA	8734470	8748271	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ENSMUST00000185005.2	chr3	-	1505	3	FSM	ENSMUSG00000001018.16	ENSMUST00000185005.2	1505	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	341	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTATTTTATTAT	NA	False	NA	-26	True	AATAAA	-23	NA	90398300	90395676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90396901_90397460_90397580_90398138
ENSMUST00000185118.8	chr2	-	2318	7	FSM	ENSMUSG00000038671.16	ENSMUST00000185118.8	2318	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	105.887387770635	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTAGCCAGTCACAAGGA	6138	False	NA	34	True	AATAAA	-18	NA	181007135	180999621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_181001355_181001431_181001533_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ENSMUST00000185168.8	chr10	-	469	3	FSM	ENSMUSG00000063320.12	ENSMUST00000185168.8	469	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	174.5	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTCATAACCATCTATG	NA	False	NA	84	True	NA	NA	NA	82459062	82455775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_82456052_82458541_82458659_82458986
ENSMUST00000185384.7	chr3	-	435	4	FSM	ENSMUSG00000078784.9	ENSMUST00000185384.7	435	4	0	0	0	0	multi-exon	FALSE	canonical	3	4849	junction_3	245.494512271773	20877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTAAATCTTGTTAAT	NA	False	NA	0	True	AATAAA	-23	NA	14676345	14671343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_14671469_14672236_14672354_14674600_14674718_14676269
ENSMUST00000185393.7	chr1	-	366	3	FSM	ENSMUSG00000079658.10	ENSMUST00000185393.7	366	3	0	0	0	0	multi-exon	FALSE	canonical	3	2400	junction_2	162.5	2763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCTGAAATTGCACTGGA	NA	False	NA	-99	True	NA	NA	NA	16718263	16713565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16713703_16715909_16716054_16718178
ENSMUST00000185423.2	chr3	-	278	3	FSM	ENSMUSG00000078784.9	ENSMUST00000185423.2	278	3	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_1	2412	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTTTATTTCTTTAAAT	NA	False	NA	-9	True	AATAAA	-14	NA	14676314	14671352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_14671469_14674600_14674718_14676269
ENSMUST00000185489.2	chr1	+	418	1	FSM	ENSMUSG00000101682.2	ENSMUST00000185489.2	418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGTGCATGAGTTAATAA	NA	False	NA	NA	False	AAAACA	-4	NA	33521181	33521599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_33521200_33521600
ENSMUST00000185510.2	chr9	-	1922	3	FSM	ENSMUSG00000032252.15	ENSMUST00000185510.2	1922	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	70	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGACATATGGTGTCTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	62029891	61987601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_61989308_61995710_61995802_62029766
ENSMUST00000185641.7	chr15	-	731	5	FSM	ENSMUSG00000062683.12	ENSMUST00000185641.7	731	5	0	0	0	0	multi-exon	FALSE	canonical	3	3206	junction_4	667.870870752723	46192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	3901	False	NA	-11	True	AATAAA	-17	NA	102579562	102571298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145_102576215_102579452
ENSMUST00000185664.2	chr9	+	647	4	FSM	ENSMUSG00000032261.17	ENSMUST00000185664.2	647	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.1022474747419	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAATTGGGCGACACCAT	NA	False	NA	NA	False	NA	NA	NA	83458883	83479577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_83458964_83459488_83459675_83476710_83476792_83479277
ENSMUST00000185675.7	chr9	-	4850	5	FSM	ENSMUSG00000032252.15	ENSMUST00000185675.7	4850	5	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	11.5974135047432	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTGGATATTTCTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	62029892	61964529	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_61968318_61975666_61975913_61977296_61977896_61995710_61995802_62029766
ENSMUST00000185676.7	chr1	-	3072	12	FSM	ENSMUSG00000026234.13	ENSMUST00000185676.7	3072	12	0	0	0	0	multi-exon	FALSE	canonical	3	5685	junction_11	703.281070741144	12969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGACTTAATACTTCCT	NA	False	NA	-28	True	AGTAAA	-16	NA	86287086	86278216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ENSMUST00000185715.7	chr2	+	944	9	FSM	ENSMUSG00000002102.16	ENSMUST00000185715.7	944	9	0	0	0	0	multi-exon	FALSE	canonical	3	1724	junction_1	108.863374809896	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACTCAAGTGAAGGTGA	NA	False	NA	NA	False	NA	NA	NA	90884622	90888190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109
ENSMUST00000185752.2	chr1	-	1901	9	FSM	ENSMUSG00000003051.14	ENSMUST00000185752.2	1901	9	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_7	94.095363860288	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCCTGAGCTCTCTGT	NA	False	NA	-10	True	AATAAA	-23	NA	135186176	135181316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135184965_135185352_135185521_135186086
ENSMUST00000185800.7	chr10	+	3142	13	FSM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_3	210.967743716638	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	2858	False	NA	9	True	AATAAA	-17	NA	20188282	20216009	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ENSMUST00000185852.7	chr13	-	3946	24	FSM	ENSMUSG00000014850.16	ENSMUST00000185852.7	3946	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	25.3850498550558	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGTATTGTATTTTGTT	NA	False	NA	NA	False	AATAAA	-28	NA	92491503	92348379	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481610_92483240_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ENSMUST00000185912.7	chr1	-	4527	21	FSM	ENSMUSG00000010453.13	ENSMUST00000185912.7	4527	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	57.849459807331	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408238	36374810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404726_36406830_36406993_36408185
ENSMUST00000186100.7	chr10	+	3231	13	FSM	ENSMUSG00000037608.17	ENSMUST00000186100.7	3231	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	359.421864094116	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTGTAACTATCAACTT	2793	False	NA	12	True	AATAAA	-20	NA	20188217	20216012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20215454_20215668_20215797
ENSMUST00000186129.7	chr1	-	7797	44	FSM	ENSMUSG00000026193.16	ENSMUST00000186129.7	7797	44	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_13	520.876343765833	2210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	NA	False	NA	-10	True	AATAAA	-14	NA	71692359	71624682	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ENSMUST00000186131.7	chr14	-	1005	4	FSM	ENSMUSG00000021917.17	ENSMUST00000186131.7	1005	4	0	0	0	0	multi-exon	FALSE	canonical	3	1717	junction_2	34.7658836600865	6885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACATTTGTTTTCTTTTT	NA	False	NA	-5	True	AATAAA	-16	NA	30723623	30721783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
ENSMUST00000186219.7	chr5	-	2904	5	FSM	ENSMUSG00000072774.11	ENSMUST00000186219.7	2904	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	90.557647385519	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAGGAATTGTGCGTT	NA	False	NA	-9	True	NA	NA	NA	105007936	104961034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_104963302_104964564_104964626_104964862_104964990_104965173_104965219_105007532
ENSMUST00000186239.7	chr10	-	2255	12	FSM	ENSMUSG00000019813.17	ENSMUST00000186239.7	2255	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	75.4430440303278	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	384	False	NA	4	True	AATAAA	-25	NA	41685609	41594836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41657479_41657547_41685568
ENSMUST00000186245.7	chr7	+	1926	12	FSM	ENSMUSG00000034867.17	ENSMUST00000186245.7	1926	12	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_4	23.6388110621019	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTCAGCCTGGGCTA	NA	False	NA	NA	False	NA	NA	NA	35285674	35308539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745
ENSMUST00000186255.7	chr1	+	768	4	FSM	ENSMUSG00000026238.15	ENSMUST00000186255.7	768	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	10628.523175347	1241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTACTTCAGACTTTAC	NA	False	NA	NA	False	NA	NA	NA	86454457	86458093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_86454673_86456894_86456967_86457452_86457527_86457686
ENSMUST00000186303.7	chr13	-	3886	7	FSM	ENSMUSG00000100235.9	ENSMUST00000186303.7	3886	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.63964143856288	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCAGTGTCGTGTTTAGT	NA	False	NA	1	True	AATAAA	-20	NA	67256613	67217462	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67219593_67222149_67222246_67222896_67223024_67245856_67247112_67250106_67250200_67250761_67250846_67256512
ENSMUST00000186358.6	chr17	-	1455	3	FSM	ENSMUSG00000047407.18	ENSMUST00000186358.6	1455	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	139.5	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	78	True	AATAAA	-20	NA	71158064	71151205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_71152236_71153166_71153394_71157866
ENSMUST00000186364.2	chr9	+	1471	9	FSM	ENSMUSG00000032369.14	ENSMUST00000186364.2	1471	9	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	116.228223766863	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGAGTTGATGTTACT	NA	False	NA	NA	False	NA	NA	NA	92132394	92154028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_92132478_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
ENSMUST00000186375.8	chr16	+	2350	7	FSM	ENSMUSG00000005982.15	ENSMUST00000186375.8	2350	7	0	0	0	0	multi-exon	FALSE	canonical	1	49	junction_5	41.1774614726713	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	False	NA	39	True	AATAAA	-20	NA	3702546	3722634	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718742_3719646_3719990_3721329
ENSMUST00000186410.7	chr9	-	1601	10	FSM	ENSMUSG00000032298.14	ENSMUST00000186410.7	1601	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	6.09391520035648	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTCTTTCTGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	57055589	57050353	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_57050611_57050734_57050898_57051041_57051104_57051262_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57052502_57053884_57054342_57055367
ENSMUST00000186472.2	chr6	+	486	2	FSM	ENSMUSG00000100680.2	ENSMUST00000186472.2	486	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCTACACTCATTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	91417968	91418737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_91418141_91418423
ENSMUST00000186475.2	chr7	+	2614	5	FSM	ENSMUSG00000099689.7	ENSMUST00000186475.2	2614	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	3.53553390593274	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAAGTTTCATAATTTTC	NA	False	NA	27	True	AATAAA	-24	NA	29607941	29616232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_29608077_29609607_29609673_29611593_29611721_29612014_29612111_29614041
ENSMUST00000186531.2	chr8	+	2137	1	FSM	ENSMUSG00000099881.2	ENSMUST00000186531.2	2137	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGTTTTACCTGCTGCT	NA	False	NA	9	True	NA	NA	NA	123769204	123771341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_123769200_123771300
ENSMUST00000186619.7	chr8	-	2337	4	FSM	ENSMUSG00000071302.11	ENSMUST00000186619.7	2337	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	18.4451137763426	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGCAGAAGATCATGTG	NA	False	NA	NA	False	NA	NA	NA	129960499	129944597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_129946633_129948024_129948086_129948304_129948432_129960385
ENSMUST00000186647.7	chr19	+	784	3	FSM	ENSMUSG00000071653.10	ENSMUST00000186647.7	784	3	0	0	0	0	multi-exon	FALSE	canonical	3	2965	junction_1	112.5	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATGAAGTGCAGCAGGG	NA	False	NA	32	True	AATAAA	-21	NA	8866262	8868110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8866613_8867366_8867465_8867774
ENSMUST00000186648.7	chr1	-	6442	41	FSM	ENSMUSG00000026219.15	ENSMUST00000186648.7	6442	41	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_36	283.885734055095	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7910	False	NA	17	True	NA	NA	NA	84817009	84701984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755211_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ENSMUST00000186659.7	chr2	+	2915	19	FSM	ENSMUSG00000027263.13	ENSMUST00000138601.8	2915	19	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_18	57.833947056195	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCCTTGTAGAACT	NA	False	NA	2	True	AATAAA	-14	NA	121001689	121029250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
ENSMUST00000186693.2	chr9	+	595	3	FSM	ENSMUSG00000035048.14	ENSMUST00000186693.2	595	3	0	0	0	0	multi-exon	FALSE	canonical	2	118	junction_1	703	4701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCACTTGGTTTTCGT	NA	False	NA	17	True	AATAAA	-17	NA	102503877	102511441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_102504118_102506961_102507088_102511212
ENSMUST00000186745.2	chr1	+	3315	15	FSM	ENSMUSG00000023150.15	ENSMUST00000186745.2	3315	15	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_7	304.179802157895	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATTTAAGAACCCCAAAC	NA	False	NA	NA	False	NA	NA	NA	151220328	151239116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUST00000186785.7	chr1	-	1964	2	FSM	ENSMUSG00000073538.11	ENSMUST00000186785.7	1964	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAGAAAAAATATAA	NA	False	NA	NA	False	AATAAA	-5	NA	153283536	153280572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_153282348_153283347
ENSMUST00000186870.7	chr3	-	1174	3	FSM	ENSMUSG00000078784.9	ENSMUST00000186870.7	1174	3	0	0	0	0	multi-exon	FALSE	canonical	3	4849	junction_2	211	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTCTTTAAATCTTG	NA	False	NA	-5	True	AATAAA	-18	NA	14676321	14671348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_14672354_14674600_14674718_14676269
ENSMUST00000186894.7	chr1	-	3073	20	FSM	ENSMUSG00000026219.15	ENSMUST00000186894.7	3073	20	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_19	109.11327312106	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGGATCCCTGGGATCTA	7894	False	NA	NA	False	NA	NA	NA	84817025	84732123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ENSMUST00000186948.7	chr1	-	641	4	FSM	ENSMUSG00000079658.10	ENSMUST00000186948.7	641	4	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	1146.38165062465	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAGTTGAAATTTGTTT	NA	False	NA	-82	True	NA	NA	NA	16727242	16713365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727135
ENSMUST00000187028.7	chr7	+	3208	4	FSM	ENSMUSG00000099689.7	ENSMUST00000187028.7	3208	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	4.02768199119819	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCATAATTTTCTTTATG	NA	False	NA	33	True	AATAAA	-30	NA	29607647	29616238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_29608077_29609607_29609673_29611593_29612111_29614041
ENSMUST00000187048.7	chr1	-	3201	8	FSM	ENSMUSG00000026484.14	ENSMUST00000187048.7	3201	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	248.196597519805	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATTAGATGTGTACTC	NA	False	NA	-5	True	CATAAA	-20	NA	151376562	151345155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151363022_151363207_151376469
ENSMUST00000187090.2	chr17	-	764	3	FSM	ENSMUSG00000100572.2	ENSMUST00000187090.2	764	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	7	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCCAGAGGAACGTATG	NA	False	NA	NA	False	NA	NA	NA	69584203	69582356	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_69582902_69583120_69583191_69584054
ENSMUST00000187160.2	chr15	-	635	3	FSM	ENSMUSG00000062683.12	ENSMUST00000187160.2	635	3	0	0	0	0	multi-exon	FALSE	canonical	3	4743	junction_1	34	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTAATTTTTTTTAAA	7285	False	NA	NA	False	NA	NA	NA	102576178	102573173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_102573683_102574197_102574291_102576145
ENSMUST00000187168.7	chr16	+	1238	12	FSM	ENSMUSG00000022884.17	ENSMUST00000187168.7	1238	12	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_11	605.093586095477	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGGAGGAAAGGTGTGG	6053	False	NA	NA	False	NA	NA	NA	22926507	22931934	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
ENSMUST00000187324.8	chr9	-	1832	14	FSM	ENSMUSG00000023262.14	ENSMUST00000187324.8	1832	14	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_13	61.5898823628318	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106315360	106310189	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106314000_106314087_106314153_106314827_106314933_106315331
ENSMUST00000187362.2	chr9	+	1406	4	FSM	ENSMUSG00000066442.18	ENSMUST00000187362.2	1406	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	184.790572150084	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGTATAAAAATAAAATAAT	NA	False	NA	NA	False	ATTAAA	-22	NA	89093463	89122244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_89093535_89094586_89095310_89097261_89097524_89121894
ENSMUST00000187500.7	chr1	-	3403	10	FSM	ENSMUSG00000025982.14	ENSMUST00000187500.7	3403	10	0	0	0	0	multi-exon	FALSE	canonical	3	1240	junction_5	107.350930234545	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTTGCTTTTAAAAATT	NA	False	NA	NA	False	AAAAAG	-13	NA	55066623	55042309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
ENSMUST00000187524.7	chr7	+	676	7	FSM	ENSMUSG00000045411.17	ENSMUST00000187524.7	676	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	348.685826433418	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTCAGCGTTGGGAATCC	NA	False	NA	NA	False	GGGGCT	-38	NA	43896222	43900379	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43896233_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000187578.2	chr15	-	1877	9	FSM	ENSMUSG00000060036.15	ENSMUST00000187578.2	1877	9	0	0	0	0	multi-exon	FALSE	canonical	3	16287	junction_8	5123.08483118326	7345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGTTTTCCCACATTT	3571	False	NA	-5	True	AATAAA	-13	NA	79967554	79961995	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965985_79966590_79966784_79967524
ENSMUST00000187652.3	chr13	-	1100	2	FSM	ENSMUSG00000100235.9	ENSMUST00000187652.3	1100	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCACATTAATTTTTCT	NA	False	NA	NA	False	AATAAA	-38	NA	67256668	67253432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67254377_67256512
ENSMUST00000187656.7	chr13	-	2310	4	FSM	ENSMUSG00000094942.8	ENSMUST00000187656.7	2310	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	23.1708629293104	492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGATCAGTCG	NA	False	NA	-12	True	NA	NA	NA	62530991	62516141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62518166_62519376_62519438_62519623_62519751_62530893
ENSMUST00000187814.7	chr12	+	4098	4	FSM	ENSMUSG00000034157.13	ENSMUST00000187814.7	4098	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	3.2659863237109	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTCTATTTGCTTTG	NA	False	NA	7	True	AATAAA	-19	NA	86994116	87012136	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_86994274_86999517_86999706_87007045_87007216_87008553
ENSMUST00000187834.2	chr1	+	1923	1	FSM	ENSMUSG00000026439.15	ENSMUST00000187834.2	1923	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCACAAGTATACATGC	NA	False	NA	5	True	AATAAA	-14	NA	132431470	132433393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_132431500_132433400
ENSMUST00000187836.7	chr1	-	1862	14	FSM	ENSMUSG00000026209.16	ENSMUST00000187836.7	1862	14	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_13	52.2384156632446	1405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75293793	75285208	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353
ENSMUST00000187960.7	chr7	+	1989	11	FSM	ENSMUSG00000049643.16	ENSMUST00000187960.7	1989	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	97.3365296278843	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	449	False	NA	NA	False	AATAAA	-20	NA	27252710	27281524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761_27280117_27280775
ENSMUST00000187973.2	chrX	-	582	1	FSM	ENSMUSG00000095597.3	ENSMUST00000187973.2	582	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2455	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAAATGACTGAATAA	NA	False	NA	NA	False	NA	NA	NA	151693116	151692534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_151692500_151693100
ENSMUST00000187994.7	chr15	-	955	4	FSM	ENSMUSG00000075602.11	ENSMUST00000187994.7	955	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	7.54247233265651	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGTTCTCCATTTTTC	9508	False	NA	-4	True	AATAAA	-15	NA	74869880	74866726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_74867329_74868300_74868418_74869383_74869467_74869727
ENSMUST00000188025.7	chr15	-	1781	8	FSM	ENSMUSG00000060036.15	ENSMUST00000188025.7	1781	8	0	0	0	0	multi-exon	FALSE	canonical	3	23824	junction_4	2825.56158044697	4182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGTTTTCCCACATTTC	4341	False	NA	-4	True	AATAAA	-14	NA	79966784	79961994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964754_79965096_79965233_79965815_79965985_79966590
ENSMUST00000188090.7	chr1	-	7105	11	FSM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_6	81.9383304687129	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132953154	132913957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ENSMUST00000188111.7	chr7	+	2131	7	FSM	ENSMUSG00000045411.17	ENSMUST00000188111.7	2131	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	296.487211641019	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896158	43901741	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43896233_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000188112.2	chr1	-	716	1	FSM	ENSMUSG00000041859.11	ENSMUST00000188112.2	716	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	603	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCTTTGTGCTTTAA	NA	False	NA	-12	True	AGTAAA	-24	NA	20873945	20873229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_20873200_20873900
ENSMUST00000188135.2	chr6	-	527	2	FSM	ENSMUSG00000101655.2	ENSMUST00000188135.2	527	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGTGAAATTTTTTTTTA	7019	False	NA	NA	False	AATAAA	-19	NA	86465186	86460357	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_86460682_86464983
ENSMUST00000188163.2	chr1	-	465	2	FSM	ENSMUSG00000102014.2	ENSMUST00000188163.2	465	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTGATGAATTTAGCATA	NA	False	NA	NA	False	AATAAA	-14	NA	127701791	127681352	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_127681691_127701664
ENSMUST00000188200.7	chr9	+	540	4	FSM	ENSMUSG00000032263.15	ENSMUST00000188200.7	540	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	313.434026373795	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTGTGTGTCCTCT	2751	False	NA	NA	False	AATAAA	-19	NA	83927939	84006292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_83927973_83951157_83951245_84004286_84004436_84006021
ENSMUST00000188205.2	chr1	-	725	4	FSM	ENSMUSG00000042305.13	ENSMUST00000188205.2	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	71.4749373323731	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGGACTTGTTGATAT	NA	False	NA	NA	False	NA	NA	NA	134289691	134283179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_134283455_134288494_134288663_134289271_134289362_134289499
ENSMUST00000188260.7	chr3	-	739	3	FSM	ENSMUSG00000054426.12	ENSMUST00000188260.7	739	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	22	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTGGCTATGGTG	944	False	NA	-5	True	NA	NA	NA	115681743	115675229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_115675488_115679862_115680025_115681424
ENSMUST00000188313.7	chr1	+	4631	29	FSM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_23	40.426725727682	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAATTGGTCTTAATTT	3312	False	NA	8	True	AATAAA	-18	NA	43973174	44042160	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ENSMUST00000188318.2	chr8	+	418	4	FSM	ENSMUSG00000100605.2	ENSMUST00000188318.2	418	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	5.71547606649408	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCACTTACTCTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-41	NA	34684012	34693299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_34684111_34688020_34688119_34691015_34691123_34693184
ENSMUST00000188345.2	chr1	-	2346	19	FSM	ENSMUSG00000042699.12	ENSMUST00000188345.2	2346	19	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_15	20.3910080642558	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAGTTCCCAAAACTTG	NA	False	NA	NA	False	CATAAA	-29	NA	153363397	153340087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ENSMUST00000188371.7	chr1	+	2268	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	2179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAAGCTGGCATCTTGA	NA	False	NA	NA	False	AATAAA	-24	NA	15875869	15914276	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ENSMUST00000188398.7	chr9	+	727	3	FSM	ENSMUSG00000035048.14	ENSMUST00000188398.7	727	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	699	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTTTCGTTTTGTTTT	NA	False	NA	25	True	AATAAA	-25	NA	102503522	102511449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_102503887_102506961_102507088_102511212
ENSMUST00000188414.4	chr6	-	3121	18	FSM	ENSMUSG00000015112.16	ENSMUST00000188414.4	3121	18	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_9	125.074538329783	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	NA	False	NA	-4	True	AATAAA	-15	NA	6217173	6041218	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ENSMUST00000188445.7	chr9	+	2711	21	FSM	ENSMUSG00000038379.16	ENSMUST00000188445.7	2711	21	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_10	27.9819584732735	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGTCTCGACAACATT	NA	False	NA	0	True	AATAAA	-15	NA	83716741	83751546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235
ENSMUST00000188503.2	chr15	+	1211	3	FSM	ENSMUSG00000022587.15	ENSMUST00000188503.2	1211	3	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	177	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8402	False	NA	27	True	AATAAA	-15	NA	74827516	74831180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_74827567_74829628_74829727_74830117
ENSMUST00000188524.2	chr1	+	681	5	FSM	ENSMUSG00000025967.17	ENSMUST00000188524.2	681	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	1438.5358876302	6392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216288	63218815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_63216451_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ENSMUST00000188533.2	chr1	+	593	5	FSM	ENSMUSG00000026238.15	ENSMUST00000188533.2	593	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8722.60083060093	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACCAGAACTTCCCAG	NA	False	NA	NA	False	NA	NA	NA	86454528	86457931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457725
ENSMUST00000188557.8	chr9	+	2552	21	FSM	ENSMUSG00000023259.18	ENSMUST00000188557.8	2552	21	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	9.81121806912883	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTCTGTCCAACTTC	NA	False	NA	-2	True	AATACA	-12	NA	108731333	108742096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108731386_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
ENSMUST00000188630.7	chr1	+	1615	10	FSM	ENSMUSG00000051223.15	ENSMUST00000188630.7	1615	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	566.862340943767	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAAGGGCAATGATTT	891	False	NA	-2	True	ATTAAA	-18	NA	58432290	58444646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUST00000188632.2	chrX	+	1177	4	FSM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	23.6971634495683	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTGGGCCACTGGAT	NA	False	NA	26	True	TATAAA	-16	NA	7917829	7939195	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_7917897_7926454_7926526_7936874_7937304_7938585
ENSMUST00000188641.7	chr1	-	2014	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	5475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCAGCACTTGGTCTTTA	NA	False	NA	0	True	AATAAA	-23	NA	16727108	16711948	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
ENSMUST00000188650.2	chr9	+	1508	8	FSM	ENSMUSG00000023277.14	ENSMUST00000188650.2	1508	8	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_7	32.5701754144894	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGAGCCTGGGTGCCT	NA	False	NA	17	True	AATAAA	-14	NA	106083996	106092586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ENSMUST00000188674.7	chr1	-	7680	45	FSM	ENSMUSG00000026193.16	ENSMUST00000188674.7	7680	45	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	516.089688054027	1584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692331	71624681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636547_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ENSMUST00000188750.7	chr9	+	1713	14	FSM	ENSMUSG00000032411.16	ENSMUST00000188750.7	1713	14	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	94.2279120445955	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGGAGAGAACTCATGT	NA	False	NA	-6	True	NA	NA	NA	96078389	96200024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ENSMUST00000188852.2	chr17	-	845	4	FSM	ENSMUSG00000099474.2	ENSMUST00000188852.2	845	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	117.235754879739	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTTTCCTCTGAGATG	NA	False	NA	-1	True	AATAAA	-25	NA	30845879	30841414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_30841669_30843173_30843588_30843854_30843908_30845755
ENSMUST00000188894.7	chr1	-	8043	45	FSM	ENSMUSG00000026193.16	ENSMUST00000188894.7	8043	45	0	0	0	0	multi-exon	TRUE	canonical	3	355	junction_21	441.858289425336	3050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71692331	71624678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ENSMUST00000189013.8	chr16	-	982	6	FSM	ENSMUSG00000023791.19	ENSMUST00000189013.8	982	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	129.408500493592	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTAGTTTGTCTTCA	NA	False	NA	-2	True	AATAAA	-28	NA	31918545	31903235	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918293
ENSMUST00000189068.7	chr15	-	878	4	FSM	ENSMUSG00000075602.11	ENSMUST00000189068.7	878	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	38.2738669184195	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTTCTCCATTTTTCT	9632	False	NA	-3	True	AATAAA	-16	NA	74869756	74866725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_74867329_74868300_74868418_74869383_74869482_74869696
ENSMUST00000189071.7	chr6	+	511	3	FSM	ENSMUSG00000085412.8	ENSMUST00000189071.7	511	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	103.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCCCGATCGAATGGAA	823	False	NA	NA	False	AAAAAG	-27	NA	52079973	52090664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_52080017_52083750_52083877_52090322
ENSMUST00000189176.2	chr1	+	885	2	FSM	ENSMUSG00000026248.10	ENSMUST00000189176.2	885	2	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGGAGGTTTACGTTA	NA	False	NA	NA	False	AATAAA	-13	NA	79753832	79756263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_79754029_79755574
ENSMUST00000189222.2	chr10	-	711	3	FSM	ENSMUSG00000019813.17	ENSMUST00000189222.2	711	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	46.5	13443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTGTGAGGCCTTGGTC	385	False	NA	NA	False	NA	NA	NA	41685608	41618697	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_41619218_41621766_41621918_41685568
ENSMUST00000189268.7	chr11	-	2347	13	FSM	ENSMUSG00000000384.16	ENSMUST00000189268.7	2347	13	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	134.990406037697	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGCCACTGGCTTTTC	NA	False	NA	-6	True	AATAAA	-18	NA	6576067	6565598	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ENSMUST00000189386.2	chr6	-	775	2	FSM	ENSMUSG00000101655.2	ENSMUST00000189386.2	775	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGTGAAATTTTTTTTTA	6996	False	NA	NA	False	AATAAA	-19	NA	86465209	86460357	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_86460700_86464776
ENSMUST00000189452.2	chr17	-	2078	4	FSM	ENSMUSG00000062101.13	ENSMUST00000189452.2	2078	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	17.6823829464998	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATATTTATGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	56256500	56245380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56246994_56247928_56247990_56248185_56248313_56256223
ENSMUST00000189529.7	chr1	-	1801	17	FSM	ENSMUSG00000026245.17	ENSMUST00000189529.7	1801	17	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_15	338.950378927359	3970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGCGTAGCTGCATTA	NA	False	NA	-2	True	AATAAA	-19	NA	78465499	78401721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456651_78458944_78459001_78465421
ENSMUST00000189636.8	chr2	-	499	4	FSM	ENSMUSG00000076437.12	ENSMUST00000189636.8	499	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	1096.46776311735	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGGTTCAGTTGTGAG	390	False	NA	-100	True	NA	NA	NA	84501020	84499650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_84499742_84500392_84500461_84500588_84500735_84500826
ENSMUST00000189654.2	chr15	+	818	3	FSM	ENSMUSG00000022583.13	ENSMUST00000189654.2	818	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	3	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAAGATCTCAGTTTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	75140550	75144084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_75140649_75141628_75141746_75143481
ENSMUST00000189670.7	chr1	-	2847	18	FSM	ENSMUSG00000026219.15	ENSMUST00000189670.7	2847	18	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_16	283.0431148152	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	NA	False	NA	17	True	NA	NA	NA	84726998	84701984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878
ENSMUST00000189690.7	chr1	-	2060	12	FSM	ENSMUSG00000026301.17	ENSMUST00000189690.7	2060	12	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_8	12	963	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAGTAATTTGGTCAC	NA	False	NA	-4	True	AATAAA	-17	NA	90017866	89969856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_89970465_89973313_89973553_89975510_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017653
ENSMUST00000189728.7	chr1	-	713	5	FSM	ENSMUSG00000026279.15	ENSMUST00000189728.7	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	175.089262948931	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTAGACTGTACATTTT	NA	False	NA	2	True	AATAAA	-41	NA	93659648	93633108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878_93653039_93659578
ENSMUST00000189770.7	chr10	-	2232	11	FSM	ENSMUSG00000019813.17	ENSMUST00000189770.7	2232	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	72.0486641097529	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	129	False	NA	4	True	AATAAA	-25	NA	41685864	41594836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568_41685660_41685783
ENSMUST00000189808.7	chr19	-	708	7	FSM	ENSMUSG00000058216.14	ENSMUST00000189808.7	708	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	28.8236978119664	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGCAGGGCTTGTCCT	9073	False	NA	NA	False	NA	NA	NA	4109446	4107476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4107719_4107887_4107996_4108085_4108190_4108528_4108617_4108734_4108842_4109258_4109295_4109423
ENSMUST00000189925.7	chr1	+	1303	8	FSM	ENSMUSG00000025949.17	ENSMUST00000189925.7	1303	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	38.9814189121967	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAATCCTTCAA	NA	False	NA	NA	False	NA	NA	NA	65225854	65245333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65245033
ENSMUST00000189936.7	chr1	+	1696	11	FSM	ENSMUSG00000018189.13	ENSMUST00000189936.7	1696	11	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_8	216.947090323885	2980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTGGATTATTTGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	143653009	143683043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
ENSMUST00000189986.7	chr14	+	4298	40	FSM	ENSMUSG00000021843.18	ENSMUST00000189986.7	4298	40	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	225.664736516441	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886850	47974021	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_47886897_47889718_47889844_47901212_47901773_47904757_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ENSMUST00000190022.7	chr10	-	1949	10	FSM	ENSMUSG00000019813.17	ENSMUST00000190022.7	1949	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	66.7229392134665	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	390	False	NA	-1	True	AATAAA	-20	NA	41685603	41594841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616910_41621766_41621918_41685568
ENSMUST00000190033.4	chr9	-	1408	4	FSM	ENSMUSG00000097195.11	ENSMUST00000190033.4	1408	4	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_2	320.936476926856	1533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88405016	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403502_88403702_88403770_88403970_88404435_88404536
ENSMUST00000190117.2	chr1	-	99	2	FSM	ENSMUSG00000099969.2	ENSMUST00000190117.2	99	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	3419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGATGGTTGCTGGGATT	NA	False	NA	NA	False	NA	NA	NA	152965253	152942226	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_152942246_152965173
ENSMUST00000190128.2	chr1	+	1338	6	FSM	ENSMUSG00000026117.11	ENSMUST00000190128.2	1338	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	6.93974062915899	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGAGTATTCTCATCTTC	NA	False	NA	1	True	AATAAA	-14	NA	36818064	36821896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_36818394_36818765_36818973_36819917_36820111_36820199_36820341_36820426_36820540_36821541
ENSMUST00000190166.7	chr9	+	1398	11	FSM	ENSMUSG00000032263.15	ENSMUST00000190166.7	1398	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	207.54623581265	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTGTGTGTGTCCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	83830833	84006293	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_83830969_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
ENSMUST00000190245.7	chr9	-	1693	10	FSM	ENSMUSG00000032298.14	ENSMUST00000190245.7	1693	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	6.09391520035648	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCTTGGTACTTCTTGG	NA	False	NA	-11	True	AATAAA	-5	NA	57055411	57050083	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_57050611_57050734_57050898_57051041_57051104_57051262_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57052502_57053884_57054342_57055367
ENSMUST00000190252.7	chr14	+	4436	41	FSM	ENSMUSG00000021843.18	ENSMUST00000190252.7	4436	41	0	0	0	0	multi-exon	TRUE	canonical	3	128	junction_40	180.470106596633	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886767	47974014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ENSMUST00000190273.2	chr1	-	422	1	FSM	ENSMUSG00000100225.2	ENSMUST00000190273.2	422	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTACATGTCCCTTCAC	NA	False	NA	NA	False	NA	NA	NA	86693087	86692665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_86692700_86693100
ENSMUST00000190279.7	chr9	+	589	3	FSM	ENSMUSG00000035048.14	ENSMUST00000190279.7	589	3	0	0	0	0	multi-exon	FALSE	canonical	3	1105	junction_1	209.5	6901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGCTTCTGTCAAAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	102503494	102511624	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_102503546_102506961_102507088_102511212
ENSMUST00000190341.7	chr9	-	3331	8	FSM	ENSMUSG00000057367.13	ENSMUST00000190341.7	3331	8	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	22.0352222681815	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGATGTGATTCATGAGA	-20	True	NA	-1	True	AATAAA	-21	NA	7837058	7818227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
ENSMUST00000190415.2	chr17	+	1964	3	FSM	ENSMUSG00000060149.8	ENSMUST00000190415.2	1964	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	11	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCCAAGTGGCCTACTC	NA	False	NA	24	True	NA	NA	NA	17171800	17194419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_17171971_17191432_17191494_17192686
ENSMUST00000190461.2	chr8	+	1039	1	FSM	ENSMUSG00000099338.2	ENSMUST00000190461.2	1039	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGCCTCCATCTTT	NA	False	NA	NA	False	NA	NA	NA	13250751	13251790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_13250800_13251800
ENSMUST00000190496.2	chr17	+	1395	3	FSM	ENSMUSG00000034595.18	ENSMUST00000190496.2	1395	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	4	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCTGCCTTCCTTTGTT	NA	False	NA	13	True	AATAAA	-20	NA	36179294	36186486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_36179678_36184617_36184832_36185688
ENSMUST00000190589.7	chr7	+	369	3	FSM	ENSMUSG00000074199.8	ENSMUST00000190589.7	369	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	12	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCCTGAATCTGTGTT	NA	False	NA	11	True	AATAAA	-16	NA	30489226	30490510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_30489382_30489992_30490041_30490344
ENSMUST00000190602.2	chr3	-	1026	3	FSM	ENSMUSG00000099370.2	ENSMUST00000190602.2	1026	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	94	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCTCATGGTCATGGTG	NA	False	NA	-5	True	NA	NA	NA	75563038	75554752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_75555246_75556106_75556298_75562696
ENSMUST00000190637.7	chr9	+	1477	11	FSM	ENSMUSG00000032263.15	ENSMUST00000190637.7	1477	11	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_3	45.3898667105335	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTGTGTGTCCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	83807197	84006292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
ENSMUST00000190652.2	chr1	+	478	3	FSM	ENSMUSG00000026380.11	ENSMUST00000190652.2	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	993	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTCTTTGTAATTTTA	NA	False	NA	NA	False	NA	NA	NA	118555674	118565496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_118555833_118559971_118560124_118565328
ENSMUST00000190679.7	chr1	-	2062	8	FSM	ENSMUSG00000033159.15	ENSMUST00000190679.7	2062	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	12.6426553656215	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTTTTCCTTCTGT	6906	False	NA	-13	True	AATAAA	-17	NA	75118335	75112411	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059
ENSMUST00000190715.7	chr9	+	1768	6	FSM	ENSMUSG00000056267.15	ENSMUST00000190715.7	1768	6	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	56.4361586219332	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTCTTGGTCATCAT	NA	False	NA	7	True	NA	NA	NA	99125513	99146981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681
ENSMUST00000190729.2	chr13	+	1184	3	FSM	ENSMUSG00000078941.10	ENSMUST00000190729.2	1184	3	0	0	0	0	multi-exon	FALSE	canonical	3	1279	junction_2	251.5	3702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTGGTACTTTGGCAG	NA	False	NA	NA	False	AATAAA	-19	NA	100787887	100792566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_100787954_100790698_100790792_100791541
ENSMUST00000190776.2	chr16	+	930	2	FSM	ENSMUSG00000071632.11	ENSMUST00000190776.2	930	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTGGCCCACGCCTT	NA	False	NA	63	True	NA	NA	NA	18655404	18658550	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18655624_18657839
ENSMUST00000190780.7	chr1	-	7694	44	FSM	ENSMUSG00000026193.16	ENSMUST00000190780.7	7694	44	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_13	572.029711943946	1569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	NA	False	NA	-10	True	AATAAA	-14	NA	71692331	71624682	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636832_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ENSMUST00000190785.7	chr6	+	4152	4	FSM	ENSMUSG00000032712.17	ENSMUST00000190785.7	4152	4	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_3	71.6286720990042	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAGAAGAAATAT	NA	False	NA	15	True	AAAAAG	-33	NA	149210953	149230475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_149211403_149211819_149211876_149219132_149219207_149226902
ENSMUST00000190825.7	chr1	+	2456	14	FSM	ENSMUSG00000026439.15	ENSMUST00000190825.7	2456	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	97.6599583023734	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTTTTATCCATCTCCA	NA	False	NA	NA	False	NA	NA	NA	132405102	132432228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431504
ENSMUST00000190841.2	chr7	+	971	2	FSM	ENSMUSG00000099417.2	ENSMUST00000190841.2	971	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAAAAAAGGC	4392	False	NA	NA	False	AATAAA	-8	NA	28191974	28197138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28192135_28196327
ENSMUST00000190843.2	chr19	+	830	4	FSM	ENSMUSG00000071653.10	ENSMUST00000190843.2	830	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	1438.49141657347	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTGGGATGAAGTGCAG	NA	False	NA	27	True	AATAAA	-16	NA	8866302	8868105	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8866613_8867000_8867092_8867366_8867465_8867774
ENSMUST00000190903.2	chr7	+	426	2	FSM	ENSMUSG00000049643.16	ENSMUST00000190903.2	426	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGTGTGTTTGTT	433	False	NA	NA	False	AGTAAA	-21	NA	27252694	27253496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27252779_27253154
ENSMUST00000190930.2	chr2	+	567	1	FSM	ENSMUSG00000099632.2	ENSMUST00000190930.2	567	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACCAGTCTCTGGCTTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	163261714	163262281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_163261700_163262300
ENSMUST00000190997.7	chr1	+	2856	14	FSM	ENSMUSG00000026439.15	ENSMUST00000190997.7	2856	14	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_13	83.2346081867393	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTACAATAAGTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	132405104	132432627	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ENSMUST00000191108.7	chr1	+	1500	8	FSM	ENSMUSG00000026201.13	ENSMUST00000191108.7	1500	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	77.7888297946198	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187513	75190886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189756_75189873_75190219_75190342_75190457
ENSMUST00000191135.2	chr5	-	1923	2	FSM	ENSMUSG00000072774.11	ENSMUST00000191135.2	1923	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTAAATGTTTGTTTCC	NA	False	NA	NA	False	AATAAA	-11	NA	105007659	104983585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_104985382_105007532
ENSMUST00000191150.2	chr1	+	874	2	FSM	ENSMUSG00000026319.14	ENSMUST00000191150.2	874	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGTCTGCTTCATAGA	NA	False	NA	11	True	AATAAA	-13	NA	105591661	105592875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_105592359_105592698
ENSMUST00000191189.7	chr9	-	1223	11	FSM	ENSMUSG00000062270.15	ENSMUST00000191189.7	1223	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	2089.62901970661	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTCTTCCTTTTTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	89996797	89974207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ENSMUST00000191213.7	chr9	-	3231	27	FSM	ENSMUSG00000032407.15	ENSMUST00000191213.7	3231	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	230.683894478131	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAATGGTTTTTTTTTTC	8192	False	NA	NA	False	NA	NA	NA	95394048	95343406	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ENSMUST00000191237.7	chr1	-	1689	9	FSM	ENSMUSG00000042305.13	ENSMUST00000191237.7	1689	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	283.900923519104	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTCATGGAAGAACGTT	NA	False	NA	67	True	NA	NA	NA	134289679	134275419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ENSMUST00000191353.2	chr9	-	600	8	FSM	ENSMUSG00000062270.15	ENSMUST00000191353.2	600	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_5	2709.89411646451	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAGAGCCCGGGTAGA	NA	False	NA	NA	False	NA	NA	NA	89996712	89979460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707_89985822_89989287_89989356_89992178_89992226_89996588
ENSMUST00000191368.7	chr1	+	1110	10	FSM	ENSMUSG00000034343.15	ENSMUST00000191368.7	1110	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	94.7511360236793	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATGCACACTCTCTTA	365	False	NA	NA	False	TATAAA	-6	NA	91178086	91213495	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_91178160_91181936_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUST00000191378.7	chr4	-	684	5	FSM	ENSMUSG00000041459.16	ENSMUST00000191378.7	684	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	433.527608694072	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAAGTCAAATGGATTCA	NA	False	NA	-11	True	AATAAA	-17	NA	148705142	148701181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148701302_148702022_148702195_148703121_148703249_148703640_148703812_148705048
ENSMUST00000191384.2	chr14	+	210	2	FSM	ENSMUSG00000101009.7	ENSMUST00000191384.2	210	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAAAATTAATCAGAAGA	NA	False	NA	NA	False	CATAAA	-7	NA	76919193	76924327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_76919350_76924273
ENSMUST00000191434.2	chr9	+	1242	10	FSM	ENSMUSG00000023345.18	ENSMUST00000191434.2	1242	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	133.805644938037	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGGGATTGGGTGC	9876	False	NA	22	True	AATAAA	-34	NA	106158578	106227091	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_106158656_106160053_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106226880
ENSMUST00000191436.7	chr15	+	1122	4	FSM	ENSMUSG00000022587.15	ENSMUST00000191436.7	1122	4	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	144.768781165001	3313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8387	False	NA	27	True	AATAAA	-15	NA	74827501	74831180	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_74827567_74829628_74829727_74830117_74830238_74830341
ENSMUST00000191450.7	chr4	-	1304	8	FSM	ENSMUSG00000041459.16	ENSMUST00000191450.7	1304	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	409.46231542732	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAAGTCAAATGGATTCA	NA	False	NA	-11	True	AATAAA	-17	NA	148711215	148701181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_148701302_148702022_148702283_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUST00000191485.7	chr3	+	3154	13	FSM	ENSMUSG00000042626.14	ENSMUST00000191485.7	3154	13	0	0	0	0	multi-exon	TRUE	canonical	3	256	junction_1	89.6222008705928	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCTCTGGAAAGTCTGA	NA	False	NA	32	True	ATTAAA	-29	NA	89325857	89337334	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ENSMUST00000191512.2	chr1	+	461	2	FSM	ENSMUSG00000018189.13	ENSMUST00000191512.2	461	2	0	0	0	0	multi-exon	FALSE	canonical	3	1199	junction_1	0	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143670412	143672824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_143670549_143672499
ENSMUST00000191598.3	chr17	+	645	3	FSM	ENSMUSG00000024038.18	ENSMUST00000191598.3	645	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	1845	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTCTGTGGCTTTGAG	NA	False	NA	NA	False	NA	NA	NA	31739158	31746219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_31739236_31740542_31740667_31745775
ENSMUST00000191689.6	chr1	+	2754	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	55.9704063816991	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTCTCTATGAATCCA	NA	False	NA	56	True	TTTAAA	-6	NA	171975684	172023074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ENSMUST00000191691.2	chr3	+	590	2	FSM	ENSMUSG00000039221.11	ENSMUST00000191691.2	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	7992	junction_1	0	2062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACATGTATGGTTCAT	NA	False	NA	11	True	AATAAA	-16	NA	28860647	28861565	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_28861008_28861335
ENSMUST00000191728.2	chr1	-	1502	4	FSM	ENSMUSG00000026516.9	ENSMUST00000191728.2	1502	4	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_2	34.5864456430872	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	180932711	180923546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_180924790_180926691_180926769_180929093_180929201_180932636
ENSMUST00000191783.6	chr3	+	1988	7	FSM	ENSMUSG00000027667.14	ENSMUST00000191783.6	1988	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	46.6455309280059	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAAGCTGAAATACTTT	3182	False	NA	22	True	AATAAA	-22	NA	32564683	32574892	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_32564882_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ENSMUST00000191896.6	chr1	-	4396	18	FSM	ENSMUSG00000102976.7	ENSMUST00000191896.6	4396	18	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_16	96.2094744595279	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTATCATTATAACTCA	NA	False	NA	1	True	AATAAA	-21	NA	133589056	133547599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588974
ENSMUST00000191947.6	chr1	+	1635	13	FSM	ENSMUSG00000026575.16	ENSMUST00000191947.6	1635	13	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	28.2090411038731	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTGACTTTGGTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	164135641	164264863	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_164135820_164140424_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
ENSMUST00000191952.2	chr3	+	3327	9	FSM	ENSMUSG00000025764.15	ENSMUST00000191952.2	3327	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	264.128164912415	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGTGTATTAACTCTTT	NA	False	NA	2	True	AATAAA	-14	NA	41519354	41561130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_41519446_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904
ENSMUST00000191997.2	chr9	+	787	2	FSM	ENSMUSG00000063856.9	ENSMUST00000191997.2	787	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	5788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGATGGGCGCTGGTCCC	NA	False	NA	-75	True	NA	NA	NA	108216441	108217449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108216758_108216978
ENSMUST00000192076.3	chr1	+	2384	11	FSM	ENSMUSG00000072258.12	ENSMUST00000192076.3	2384	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	9.96042167782067	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTAGTATTTTATTC	NA	False	NA	16	True	AATAAA	-27	NA	183170324	183191020	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
ENSMUST00000192150.6	chr1	+	1756	6	FSM	ENSMUSG00000026708.17	ENSMUST00000192150.6	1756	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	51.3754805330325	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTTTCCAATTGAAG	NA	False	NA	6	True	AATAAA	-12	NA	160898519	160913894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160898927_160902326_160902501_160905898_160906051_160907437_160907581_160910477_160911021_160913557
ENSMUST00000192225.2	chr1	+	513	3	FSM	ENSMUSG00000026575.16	ENSMUST00000192225.2	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	21	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGGAACACAGAGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	164135316	164140736	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_164135324_164135628_164135820_164140421
ENSMUST00000192248.2	chr1	-	1271	11	FSM	ENSMUSG00000026683.15	ENSMUST00000192248.2	1271	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_10	33.1324614238061	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAAAGTGTGGGTTTTT	NA	False	NA	-3	True	AATACA	-15	NA	169358980	169337685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
ENSMUST00000192307.6	chr9	+	1191	3	FSM	ENSMUSG00000032599.13	ENSMUST00000192307.6	1191	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	47	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTCTTGTAGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	108660994	108675188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108661070_108673262_108673596_108674405
ENSMUST00000192495.6	chr3	+	620	6	FSM	ENSMUSG00000041355.14	ENSMUST00000192495.6	620	6	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_3	1870.91094389872	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGACTCCAGAGGGTGT	3616	False	NA	NA	False	AAGAAA	-10	NA	88486973	88495340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88486994_88487186_88487342_88488280_88488346_88491043_88491193_88494171_88494250_88495187
ENSMUST00000192506.2	chr6	-	3289	1	FSM	ENSMUSG00000057666.19	ENSMUST00000192506.2	3289	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4980	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTCCCAGCCCAGGG	NA	False	NA	NA	False	NA	NA	NA	125141966	125138677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_125138700_125142000
ENSMUST00000192561.6	chr1	+	3160	15	FSM	ENSMUSG00000058729.14	ENSMUST00000192561.6	3160	15	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	15.1320716307033	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	9	True	AATAAA	-19	NA	180468714	180518252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180468963_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ENSMUST00000192584.2	chr9	-	2525	14	FSM	ENSMUSG00000039542.17	ENSMUST00000192584.2	2525	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	45.8701537594672	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGGTGACGAAATAATTA	8684	False	NA	NA	False	AATAAA	-22	NA	49710058	49442575	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_49443274_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
ENSMUST00000192615.6	chr9	-	1777	9	FSM	ENSMUSG00000032562.14	ENSMUST00000192615.6	1777	9	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	364.681860496241	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTTCTTTTCTCCT	4825	False	NA	0	True	AATAAA	-24	NA	107512511	107491323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107491915_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ENSMUST00000192639.6	chr1	-	1294	4	FSM	ENSMUSG00000026701.16	ENSMUST00000192639.6	1294	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	831.771736849854	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACCGTTGTCATGTTT	NA	False	NA	-11	True	AATAAA	-10	NA	161078756	161068584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161078591
ENSMUST00000192698.3	chr1	+	1811	13	FSM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	140.296783640966	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATAATTAAAGGATTCT	NA	False	NA	-12	True	NA	NA	NA	5153376	5232642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ENSMUST00000192704.6	chr1	+	2859	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	115.931269170995	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	False	NA	15	True	ATTAAA	-17	NA	171975708	172023033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ENSMUST00000192710.2	chr1	+	687	6	FSM	ENSMUSG00000026575.16	ENSMUST00000192710.2	687	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	52.9550752997293	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACAAGTGACTTTGGTT	7384	False	NA	NA	False	AATAAA	-12	NA	164200837	164264861	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_164200904_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
ENSMUST00000192725.6	chr1	+	2878	14	FSM	ENSMUSG00000058729.14	ENSMUST00000192725.6	2878	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.6784305808708	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATCTTACTAACATAG	NA	False	NA	16	True	AATAAA	-26	NA	180468898	180518259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180468963_180475865_180475899_180478306_180478402_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ENSMUST00000192775.2	chr1	-	879	2	FSM	ENSMUSG00000102976.7	ENSMUST00000192775.2	879	2	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCACTATTTTTATATTGA	NA	False	NA	NA	False	NA	NA	NA	133589118	133582401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_133583137_133588974
ENSMUST00000192850.6	chr1	+	1914	6	FSM	ENSMUSG00000026708.17	ENSMUST00000192850.6	1914	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	49.9095181303126	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTTTCCAATTGAAG	NA	False	NA	6	True	AATAAA	-12	NA	160898461	160913894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160907437_160907581_160910477_160911021_160913557
ENSMUST00000193168.2	chr3	+	552	4	FSM	ENSMUSG00000039221.11	ENSMUST00000193168.2	552	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_2	3246.42750659175	5206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGGTTCATCAGTGT	NA	False	NA	17	True	AATAAA	-22	NA	28859658	28861571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_28859693_28860648_28860742_28860818_28861008_28861335
ENSMUST00000193190.6	chr9	-	2160	15	FSM	ENSMUSG00000064145.13	ENSMUST00000193190.6	2160	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	244.802388026901	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTCACCCTTTAGCTA	NA	False	NA	-24	True	AATAAA	-11	NA	108526584	108481884	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
ENSMUST00000193210.6	chr1	+	865	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	0	0	0	0	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	22021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGCTAAAAATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	36730564	36732762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
ENSMUST00000193235.2	chr1	+	362	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193235.2	362	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3383.70989694251	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTGGCTAGTCTTATGT	NA	False	NA	22	True	AATAAA	-27	NA	36730724	36732466	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_36730771_36731338_36731366_36731531_36731632_36732277
ENSMUST00000193242.2	chr9	-	852	3	FSM	ENSMUSG00000070283.5	ENSMUST00000193242.2	852	3	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	48.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTCCTCTTACATATTTT	8667	False	NA	-18	True	NA	NA	NA	108444109	108443075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_108443275_108443357_108443951_108444049
ENSMUST00000193254.6	chr9	-	2518	22	FSM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_21	23.0064567492301	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTGTGCTGGTACTT	NA	False	NA	-32	True	AATAAA	-14	NA	107971805	107962611	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
ENSMUST00000193279.2	chr3	-	315	4	FSM	ENSMUSG00000037152.12	ENSMUST00000193279.2	315	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2986.95545478818	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTCAGTGACGGATGT	NA	False	NA	-136	True	NA	NA	NA	51316385	51313002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_51313036_51314756_51314834_51315565_51315670_51316284
ENSMUST00000193338.6	chr3	-	795	3	FSM	ENSMUSG00000028066.16	ENSMUST00000193338.6	795	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCTGTGAGGAGGTTT	NA	False	NA	-6	True	AATAAA	-16	NA	88317633	88301449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_88301878_88303211_88303408_88317462
ENSMUST00000193359.6	chr1	+	1894	8	FSM	ENSMUSG00000042901.11	ENSMUST00000193359.6	1894	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	48.8755186829829	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGATGGATGGTTGTTAC	NA	False	NA	NA	False	AATAAA	-12	NA	183087225	183104463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
ENSMUST00000193628.6	chr9	+	1736	9	FSM	ENSMUSG00000010057.9	ENSMUST00000193628.6	1736	9	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	11.1235954169504	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGTGGAATATTGAGTA	NA	False	NA	2	True	AATAAA	-13	NA	107419443	107422894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107422040_107422112_107422587_107422689
ENSMUST00000193638.6	chr1	+	2253	14	FSM	ENSMUSG00000026554.16	ENSMUST00000193638.6	2253	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	236.134301371113	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGATACCTGAGGAGGAC	NA	False	NA	NA	False	AATAAA	-2	NA	171975650	172022361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014919_172015028_172016505_172016637_172018410_172018647_172020084_172020205_172021351_172021469_172022122
ENSMUST00000193673.6	chr1	+	662	5	FSM	ENSMUSG00000026087.12	ENSMUST00000193673.6	662	5	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	367.71796257458	2787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCGTTCAGTTCTCTC	NA	False	NA	46	True	NA	NA	NA	37929612	37937445	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_37929666_37933019_37933097_37934410_37934492_37936768_37936916_37937141
ENSMUST00000193675.2	chr2	+	1777	8	FSM	ENSMUSG00000026728.10	ENSMUST00000193675.2	1777	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	98.0899212613673	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTGGTGTGTTATTTT	50	False	NA	13	True	AATAAA	-13	NA	13579091	13587636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13587283
ENSMUST00000193683.6	chr1	+	1740	14	FSM	ENSMUSG00000026575.16	ENSMUST00000193683.6	1740	14	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	20.0017750691572	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTTATTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	164135240	164264869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_164135324_164135628_164135820_164140421_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
ENSMUST00000193792.6	chr2	-	2110	11	FSM	ENSMUSG00000025816.16	ENSMUST00000193792.6	2110	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	89.7356673792534	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTTGCAGTTGT	NA	False	NA	-59	True	AATAAA	-9	NA	5900145	5875839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_5876833_5878553_5878631_5879037_5879230_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ENSMUST00000193868.2	chr9	-	380	3	FSM	ENSMUSG00000091537.3	ENSMUST00000193868.2	380	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	2893	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAACTTTTGTAAAAAAA	NA	False	NA	NA	False	AATGAA	-30	NA	108911446	108907253	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_108907494_108911069_108911158_108911394
ENSMUST00000193907.6	chr1	+	531	4	FSM	ENSMUSG00000062169.14	ENSMUST00000193907.6	531	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	993.032504782978	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACAATTGAGGAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	180972257	180993813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_180972467_180983423_180983537_180989639_180989781_180993745
ENSMUST00000193987.2	chr9	+	653	3	FSM	ENSMUSG00000063856.9	ENSMUST00000193987.2	653	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4434	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGATGGGCGCTGGTCCC	NA	False	NA	-75	True	NA	NA	NA	108216474	108217449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108216516_108216619_108216758_108216975
ENSMUST00000194029.2	chr1	+	543	2	FSM	ENSMUSG00000103711.2	ENSMUST00000194029.2	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAGTTGTATTTAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	171247286	171247919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171247669_171247758
ENSMUST00000194206.2	chr9	+	2827	9	FSM	ENSMUSG00000032936.14	ENSMUST00000194206.2	2827	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	16.4159792580278	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTTGCCTT	NA	False	NA	10	True	AATAAA	-18	NA	107822457	107826882	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823660_107823989_107824119_107824280_107824360_107824578_107824667_107824942
ENSMUST00000194208.6	chr3	+	1527	6	FSM	ENSMUSG00000041750.14	ENSMUST00000194208.6	1527	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	24.5568727650733	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTATTGTTTTATTA	NA	False	NA	2	True	AATAAA	-14	NA	86893857	86897087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_86894013_86894294_86894568_86894849_86895129_86895584_86895863_86896457_86896555_86896642
ENSMUST00000194237.2	chr1	-	1047	2	FSM	ENSMUSG00000055067.16	ENSMUST00000194237.2	1047	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTTTCTATTTATTTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	179345570	179335871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_179336701_179345352
ENSMUST00000194244.6	chr17	-	862	5	FSM	ENSMUSG00000073406.11	ENSMUST00000194244.6	862	5	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_3	129.95191418367	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGGTTGATTAGTGGAG	NA	False	NA	-79	True	NA	NA	NA	36395115	36391080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394858_36395051
ENSMUST00000194533.6	chr2	-	1843	10	FSM	ENSMUSG00000026767.13	ENSMUST00000194533.6	1843	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	51.3963057710725	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCACTTTTACATTTG	NA	False	NA	-22	True	AATAAA	-19	NA	12424259	12352073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12423969
ENSMUST00000194542.6	chr9	-	3151	6	FSM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	41.5143348736313	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCTCTGAATTAACCT	NA	False	NA	1	True	AATAAA	-18	NA	21150628	21141025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
ENSMUST00000194594.2	chr1	+	1551	1	FSM	ENSMUSG00000103071.2	ENSMUST00000194594.2	1551	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	577	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGTGCAGGTCATATA	377	False	NA	NA	False	NA	NA	NA	44796101	44797652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_44796100_44797700
ENSMUST00000194649.2	chr3	+	525	4	FSM	ENSMUSG00000039221.11	ENSMUST00000194649.2	525	4	0	0	0	0	multi-exon	FALSE	canonical	3	3779	junction_1	1855.270390596	42286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGTTCATCAGTGTGT	NA	False	NA	19	True	AATAAA	-24	NA	28859617	28861573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_28859693_28860651_28860742_28860885_28861008_28861335
ENSMUST00000194740.6	chr1	+	4418	35	FSM	ENSMUSG00000039318.13	ENSMUST00000194740.6	4418	35	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_25	17.4221203306776	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGCAGATGCTTTATT	NA	False	NA	88	True	TATAAA	-19	NA	184936313	185016382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999212_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ENSMUST00000194746.6	chr1	+	703	4	FSM	ENSMUSG00000073702.12	ENSMUST00000194746.6	703	4	0	0	0	0	multi-exon	FALSE	canonical	3	7651	junction_1	2213.20918326508	7707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTTTGGTTTTCCTT	NA	False	NA	26	True	AATAAA	-15	NA	39406958	39410447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034
ENSMUST00000194747.2	chr1	-	2605	4	FSM	ENSMUSG00000058407.13	ENSMUST00000194747.2	2605	4	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	99.432836069826	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCACATGTCTGTTTTT	NA	False	NA	-5	True	NA	NA	NA	38036305	38026476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_38026861_38029283_38029539_38033072_38034923_38036189
ENSMUST00000194785.2	chr1	+	4002	18	FSM	ENSMUSG00000037461.11	ENSMUST00000194785.2	4002	18	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	67.3081022079613	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTGGTTTTTGTTTTTT	8319	False	NA	98	True	TTTAAA	-3	NA	191307873	191354858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_191308064_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUST00000194801.6	chr9	-	2691	20	FSM	ENSMUSG00000032580.13	ENSMUST00000194801.6	2691	20	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_17	154.105011503965	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGTGTCTTTATTGA	NA	False	NA	-2	True	AAGAAA	-16	NA	107637762	107617694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107634107_107634192_107636974_107637049_107637520
ENSMUST00000194857.6	chr1	+	501	5	FSM	ENSMUSG00000026087.12	ENSMUST00000194857.6	501	5	0	0	0	0	multi-exon	FALSE	canonical	3	895	junction_1	64.9514241568266	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACAGAAGAGACCATGTC	NA	False	NA	NA	False	NA	NA	NA	37932013	37937246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_37932105_37933019_37933097_37934410_37934492_37936768_37936916_37937141
ENSMUST00000194858.2	chr1	+	400	1	FSM	ENSMUSG00000102961.2	ENSMUST00000194858.2	400	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGCAAGAACATTTTCCC	5709	False	NA	NA	False	NA	NA	NA	156506114	156506514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_156506100_156506500
ENSMUST00000194876.6	chr3	+	1059	9	FSM	ENSMUSG00000028199.19	ENSMUST00000194876.6	1059	9	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	25.4447931805311	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTATCCATTGGAGA	NA	False	NA	NA	False	AATAGA	-28	NA	154302780	154327804	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ENSMUST00000194877.6	chr1	+	3069	19	FSM	ENSMUSG00000037461.11	ENSMUST00000194877.6	3069	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	68.875894831856	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATAACCTGGCTCTCA	8299	False	NA	NA	False	NA	NA	NA	191307853	191353758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_191308064_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUST00000194932.6	chr9	+	2054	11	FSM	ENSMUSG00000010048.11	ENSMUST00000194932.6	2054	11	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_10	36.8511872264653	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	21	True	ATTAAA	-33	NA	107464924	107470237	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ENSMUST00000194959.6	chr9	+	3436	21	FSM	ENSMUSG00000032612.15	ENSMUST00000194959.6	3436	21	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	159.685973084676	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAACTGGGTGCAGTGTG	NA	False	NA	39	True	NA	NA	NA	108225111	108269719	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ENSMUST00000195014.6	chr3	+	1059	6	FSM	ENSMUSG00000041355.14	ENSMUST00000195014.6	1059	6	0	0	0	0	multi-exon	FALSE	canonical	3	3697	junction_1	473.044775893361	21288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTCTTGCGTCAA	3557	False	NA	15	True	AATAAA	-17	NA	88486914	88495726	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88486994_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ENSMUST00000195123.6	chr1	+	356	4	FSM	ENSMUSG00000073702.12	ENSMUST00000195123.6	356	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5182.47514867816	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTTTGGTTTTCCTT	NA	False	NA	26	True	AATAAA	-15	NA	39407229	39410447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_39407337_39409094_39409221_39410089_39410148_39410382
ENSMUST00000195151.6	chr1	+	344	3	FSM	ENSMUSG00000061518.12	ENSMUST00000195151.6	344	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	3647.5	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGGCTAGTCTTATGTC	NA	False	NA	23	True	AATAAA	-28	NA	36730690	36732467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_36730771_36731291_36731366_36732277
ENSMUST00000195235.6	chr9	-	1162	4	FSM	ENSMUSG00000037190.13	ENSMUST00000195235.6	1162	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	4.08248290463863	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCGGGAGGAGCAGCGC	NA	False	NA	-20	True	AATAAA	-19	NA	107419392	107416773	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_107417585_107418201_107418240_107418695_107418850_107419233
ENSMUST00000195373.2	chr1	+	587	4	FSM	ENSMUSG00000026087.12	ENSMUST00000195373.2	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	1006	junction_1	22.6421435969889	2457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	False	NA	20	True	ATTAAA	-20	NA	37933015	37937419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_37933097_37934410_37934492_37936768_37936916_37937141
ENSMUST00000195394.6	chr1	+	2584	10	FSM	ENSMUSG00000026554.16	ENSMUST00000195394.6	2584	10	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	56.719147810903	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAATAAAAATACA	NA	False	NA	NA	False	TTTAAA	-5	NA	171975655	172016148	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919
ENSMUST00000195426.2	chr1	+	1746	1	FSM	ENSMUSG00000102700.2	ENSMUST00000195426.2	1746	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGGAGAAAAATCATT	8653	False	NA	NA	False	NA	NA	NA	89024794	89026540	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_89024800_89026500
ENSMUST00000195519.6	chr3	+	138	3	FSM	ENSMUSG00000039221.11	ENSMUST00000195519.6	138	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	202.5	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCTAGTTTTGCATTCT	NA	False	NA	NA	False	NA	NA	NA	28859713	28860849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_28859731_28860651_28860742_28860818
ENSMUST00000195751.2	chr3	+	3474	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGACTCAACCCTTTTTA	8792	False	NA	NA	False	AATAAA	-35	NA	30656792	30672650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ENSMUST00000195752.6	chr9	+	2062	5	FSM	ENSMUSG00000010047.13	ENSMUST00000195752.6	2062	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	94.7532980956336	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTCTTTTTCTGCTTC	NA	False	NA	18	True	ATTAAA	-20	NA	107445143	107449978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_107445176_107446181_107446433_107447302_107448270_107448690_107448781_107449256
ENSMUST00000195827.6	chr3	+	473	4	FSM	ENSMUSG00000039221.11	ENSMUST00000195827.6	473	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3627.89418564299	2797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAACATGTATGGTTCA	NA	False	NA	10	True	AATAAA	-15	NA	28859811	28861564	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_28859844_28860651_28860742_28860885_28861008_28861335
ENSMUST00000195838.6	chr17	-	1105	6	FSM	ENSMUSG00000073406.11	ENSMUST00000195838.6	1105	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	180.752427369593	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGGTTGATTAGTGGAG	NA	False	NA	-79	True	NA	NA	NA	36395115	36391080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394825_36395051
ENSMUST00000195855.6	chr3	-	1587	4	FSM	ENSMUSG00000040374.14	ENSMUST00000195855.6	1587	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	22.2161102706022	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGTGCATTTATTTTT	NA	False	NA	0	True	AATAAA	-20	NA	5641205	5625559	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_5626821_5628224_5628333_5628679_5628790_5641097
ENSMUST00000195913.2	chr3	-	484	2	FSM	ENSMUSG00000040943.13	ENSMUST00000195913.2	484	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTAGATTTCTTTCTGT	NA	False	NA	NA	False	AATAAA	-38	NA	133250047	133244522	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_133244920_133249960
ENSMUST00000195980.5	chr5	+	1732	21	FSM	ENSMUSG00000037426.19	ENSMUST00000195980.5	1732	21	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	38.8026738769379	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCCCCACAGAGGGACT	2062	False	NA	NA	False	NA	NA	NA	33021113	33081524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505
ENSMUST00000195998.5	chr3	-	458	5	FSM	ENSMUSG00000090733.7	ENSMUST00000195998.5	458	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9237.94281753248	32872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCTTGTTTAACTGG	NA	False	NA	-2	True	AATAAA	-19	NA	90120954	90119973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120687_90120801_90120916
ENSMUST00000196069.5	chr5	+	1150	4	FSM	ENSMUSG00000007812.17	ENSMUST00000196069.5	1150	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	192.902969276151	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTACTTTTTGTAG	1305	False	NA	NA	False	AATACA	-16	NA	145168538	145174658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145173859
ENSMUST00000196077.5	chr3	-	1981	16	FSM	ENSMUSG00000028107.15	ENSMUST00000196077.5	1981	16	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	215.408696822265	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662147	95647287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95647632_95648633_95648749_95649385_95649536_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95655353_95655453_95655798_95655867_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ENSMUST00000196101.2	chr5	-	388	1	FSM	ENSMUSG00000105828.2	ENSMUST00000196101.2	388	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49375030	49374642	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_49374600_49375000
ENSMUST00000196111.5	chr5	+	1394	10	FSM	ENSMUSG00000029622.17	ENSMUST00000196111.5	1394	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	583.199688394301	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACAAACAACC	8129	False	NA	-84	True	NA	NA	NA	145051121	145064883	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062688_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUST00000196130.5	chr5	-	2547	10	FSM	ENSMUSG00000029560.13	ENSMUST00000196130.5	2547	10	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_8	16.9144543344472	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTTCCACGCTGCAGT	NA	False	NA	-10	True	AATAAA	-16	NA	140346170	140326055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946
ENSMUST00000196171.5	chr9	-	3885	23	FSM	ENSMUSG00000032480.18	ENSMUST00000196171.5	3885	23	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_21	194.977308491133	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109946505	109913388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109937008_109937038_109938093_109938190_109942038_109942094_109944558_109944651_109946425
ENSMUST00000196202.5	chr3	-	495	5	FSM	ENSMUSG00000062006.13	ENSMUST00000196202.5	495	5	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_4	3611.9776092883	27233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGCACATTTTTTAAGT	NA	False	NA	-56	True	NA	NA	NA	130523970	130520524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523837
ENSMUST00000196205.5	chr3	-	452	3	FSM	ENSMUSG00000090733.7	ENSMUST00000196205.5	452	3	0	0	0	0	multi-exon	TRUE	canonical	3	15374	junction_1	2726.5	29523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGGTTTAAAACTGGTG	NA	False	NA	NA	False	TATAAA	-7	NA	90120608	90119828	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90120061_90120240_90120352_90120499
ENSMUST00000196266.5	chr3	-	1271	9	FSM	ENSMUSG00000038975.15	ENSMUST00000196266.5	1271	9	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_3	203.564140690348	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAGTCTTCTGAGTCCA	7028	False	NA	-29	True	AATAAA	-16	NA	153617718	153613090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
ENSMUST00000196273.2	chr14	+	277	3	FSM	ENSMUSG00000010406.13	ENSMUST00000196273.2	277	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	660.5	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGACTCTCTCTGGCTT	NA	False	NA	20	True	AATAAA	-21	NA	54664507	54667206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_54664549_54664627_54664696_54667038
ENSMUST00000196304.2	chr5	-	704	5	FSM	ENSMUSG00000007415.16	ENSMUST00000196304.2	704	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	182.946030293089	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCTATTTATAATATAAC	NA	False	NA	-36	True	AATAAA	-17	NA	3707185	3691289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3707142
ENSMUST00000196329.5	chr5	-	2100	15	FSM	ENSMUSG00000038095.16	ENSMUST00000196329.5	2100	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_14	133.161556013738	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAATAAAATAAAGAA	NA	False	NA	NA	False	NA	NA	NA	124564020	124533985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563909
ENSMUST00000196483.5	chr5	-	2814	11	FSM	ENSMUSG00000039753.17	ENSMUST00000196483.5	2814	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	167.474057692527	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTGTTGTGATTT	8869	False	NA	-1	True	AATAAA	-28	NA	43939451	43901957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918195_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ENSMUST00000196667.5	chr5	-	675	7	FSM	ENSMUSG00000047215.15	ENSMUST00000196667.5	675	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	5003.25345539169	78716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTATATATTGATTTGTG	NA	False	NA	-20	True	AATAAA	-2	NA	65548329	65545720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65545811_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288
ENSMUST00000196695.5	chr3	+	2374	20	FSM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	0	0	0	0	multi-exon	FALSE	canonical	1	416	junction_13	300.522177130688	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916155	151938408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ENSMUST00000196709.5	chr3	-	1382	11	FSM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_10	899.425283166979	9884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89009195	89000894	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89008227_89008444_89009168
ENSMUST00000196727.5	chr5	+	2749	12	FSM	ENSMUSG00000054099.12	ENSMUST00000196727.5	2749	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	12.5210566448736	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGATGTGTATTTGTG	NA	False	NA	NA	False	ATTAAA	-10	NA	8472857	8504789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_8473040_8477195_8477268_8477407_8477517_8478628_8478689_8480430_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ENSMUST00000196733.5	chr3	-	2555	12	FSM	ENSMUSG00000005968.15	ENSMUST00000196733.5	2555	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	16.8728840118112	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCCCCGTGGGTCTTT	6440	False	NA	-7	True	AATAAA	-14	NA	94566179	94520065	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94566031
ENSMUST00000196739.5	chr3	+	2526	20	FSM	ENSMUSG00000028034.16	ENSMUST00000196739.5	2526	20	0	0	0	0	multi-exon	FALSE	canonical	1	74	junction_19	415.06742768987	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916134	151938408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151937891
ENSMUST00000196843.5	chr3	-	3975	28	FSM	ENSMUSG00000042520.17	ENSMUST00000196843.5	3975	28	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	196.719480946381	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3560	False	NA	99	True	AAAAAG	-18	NA	89959769	89907599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ENSMUST00000196997.2	chr5	-	241	2	FSM	ENSMUSG00000029580.15	ENSMUST00000196997.2	241	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGATGTATGAAGGCTT	5828	False	NA	53	True	NA	NA	NA	142889409	142888988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_142889156_142889335
ENSMUST00000197002.2	chr5	+	626	2	FSM	ENSMUSG00000029414.12	ENSMUST00000197002.2	626	2	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGTTTCTTGTGTCAT	NA	False	NA	28	True	AATAAA	-20	NA	123957609	123959655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_123958024_123959443
ENSMUST00000197074.5	chr5	-	2413	17	FSM	ENSMUSG00000029472.14	ENSMUST00000197074.5	2413	17	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	522.501461570922	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGGGTTTTTTTTTAT	NA	False	NA	-19	True	AATAAA	-20	NA	122959343	122925785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938672_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUST00000197095.5	chr5	+	617	4	FSM	ENSMUSG00000097908.8	ENSMUST00000197095.5	617	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	17.326921891156	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTTCATCTATGGTCT	NA	False	NA	NA	False	NA	NA	NA	136948205	136962539	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_136948286_136951160_136951282_136954557_136954750_136962315
ENSMUST00000197111.2	chr3	-	419	4	FSM	ENSMUSG00000027679.14	ENSMUST00000197111.2	419	4	0	0	0	0	multi-exon	FALSE	canonical	3	3089	junction_3	316.042191276207	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCAGTGTCTTGGTATA	NA	False	NA	-4	True	AATAAA	-44	NA	34134329	34131502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232
ENSMUST00000197134.3	chr3	+	2493	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197134.3	2493	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1154.08781896247	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	135144971	135172436	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135169481_135169532_135170955
ENSMUST00000197361.5	chr3	-	329	4	FSM	ENSMUSG00000090733.7	ENSMUST00000197361.5	329	4	0	0	0	0	multi-exon	FALSE	canonical	2	296	junction_1	8530.83639249725	58473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTTTGTCTTGTTTAA	NA	False	NA	-6	True	AATAAA	-15	NA	90120955	90119977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90120048_90120240_90120352_90120499_90120609_90120916
ENSMUST00000197370.5	chr3	-	655	3	FSM	ENSMUSG00000105837.5	ENSMUST00000197370.5	655	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	7.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAACCCATTTTTTTC	6961	False	NA	NA	False	AATAAA	-8	NA	129325758	129321115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_129321464_129324707_129324814_129325557
ENSMUST00000197438.5	chr3	-	1992	8	FSM	ENSMUSG00000038975.15	ENSMUST00000197438.5	1992	8	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_3	212.229275327704	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6798	False	NA	0	True	AATAAA	-17	NA	153617948	153612923	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616526_153617561
ENSMUST00000197440.5	chr14	-	2278	12	FSM	ENSMUSG00000000958.11	ENSMUST00000197440.5	2278	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	56.5898685556036	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655156	54606900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54651336_54651471_54654045_54654228_54655113
ENSMUST00000197449.2	chr3	-	3298	9	FSM	ENSMUSG00000028106.14	ENSMUST00000197449.2	3298	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	23.6851087183488	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAAGTGTCATGAATTG	10010	False	NA	-4	True	ATTAAA	-15	NA	95726090	95679566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
ENSMUST00000197460.5	chr9	-	1290	7	FSM	ENSMUSG00000032494.13	ENSMUST00000197460.5	1290	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	2178.41216383759	11278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAGAGAAGAAAAACTAT	NA	False	NA	NA	False	NA	NA	NA	110775162	110769310	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_110769888_110771396_110771507_110771597_110771713_110771835_110771898_110772219_110772322_110773258_110773312_110774891
ENSMUST00000197466.5	chr5	-	2972	20	FSM	ENSMUSG00000037364.13	ENSMUST00000197466.5	2972	20	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	165.9658376889	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	8265	False	NA	-12	True	AGTAAA	-18	NA	137305928	137293976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137294169_137294248_137294355_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ENSMUST00000197488.5	chr3	+	3827	19	FSM	ENSMUSG00000068823.11	ENSMUST00000197488.5	3827	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	4738.14950757918	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCCTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102927979	102965120	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_102928208_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUST00000197502.5	chr3	+	2751	27	FSM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_20	89.4210256174979	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTACATACCAATCGCAG	NA	False	NA	-92	True	NA	NA	NA	54600227	54636057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ENSMUST00000197539.5	chr3	+	2515	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	0	0	0	0	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	1933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGATTGTTTGACAAGT	NA	False	NA	11	True	AATAAA	-12	NA	135144897	135172434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUST00000197565.3	chr13	-	1391	10	FSM	ENSMUSG00000003062.14	ENSMUST00000197565.3	1391	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	324.011659598163	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	False	NA	0	True	AATAAA	-19	NA	19579904	19541845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19575142_19575268_19579873
ENSMUST00000197645.2	chr5	-	625	1	FSM	ENSMUSG00000104765.2	ENSMUST00000197645.2	625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATAAAGTCACCTCCTA	NA	False	NA	NA	False	NA	NA	NA	23593242	23592617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_23592600_23593200
ENSMUST00000197694.5	chr3	+	2129	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	1777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	4859	False	NA	20	True	ATTAAA	-23	NA	34074256	34123494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ENSMUST00000197719.5	chr5	-	2383	17	FSM	ENSMUSG00000029472.14	ENSMUST00000197719.5	2383	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	591.121150732868	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	False	NA	-17	True	AATAAA	-22	NA	122959350	122925783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_122926082_122926364_122926504_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUST00000197767.5	chr3	-	1092	7	FSM	ENSMUSG00000027944.14	ENSMUST00000197767.5	1092	7	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_5	640.345588118027	10207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTAGTCTTGGTTTTGT	7221	False	NA	NA	False	AATAAA	-19	NA	89905973	89902759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904873_89905044_89905311_89905834
ENSMUST00000197786.5	chr3	-	857	6	FSM	ENSMUSG00000027944.14	ENSMUST00000197786.5	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	742.362876226984	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7210	False	NA	NA	False	AATAAA	-16	NA	89905984	89902762	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89905108_89905311_89905834
ENSMUST00000197787.5	chr5	-	908	5	FSM	ENSMUSG00000023452.20	ENSMUST00000197787.5	908	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	341.751645936051	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGCCCACAGGCCAAACC	7834	False	NA	NA	False	NA	NA	NA	32899819	32895324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_32895491_32895731_32895879_32896125_32896265_32896527_32896718_32899553
ENSMUST00000197859.5	chr3	+	3833	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	0	0	0	0	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	2822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTCTTACTCAGTAAT	NA	False	NA	5	True	ATTAAA	-18	NA	135144325	135173959	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUST00000197912.5	chr5	-	799	5	FSM	ENSMUSG00000029718.15	ENSMUST00000197912.5	799	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	248.609508064354	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCGTGTCTGAGGTTCT	5036	False	NA	-4	True	AATAAA	-19	NA	137608736	137603366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137603580_137603718_137603890_137603984_137604063_137607152_137607412_137608658
ENSMUST00000197928.5	chr9	-	4441	23	FSM	ENSMUSG00000032480.18	ENSMUST00000197928.5	4441	23	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_20	135.338876788039	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946898	109913387	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
ENSMUST00000197946.5	chr5	-	1206	6	FSM	ENSMUSG00000015806.13	ENSMUST00000197946.5	1206	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	392.953635941952	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTACACATAGGGGTCC	NA	False	NA	6	True	AATAAA	-40	NA	45607463	45591369	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_45592021_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
ENSMUST00000197973.2	chr3	+	321	1	FSM	ENSMUSG00000105388.2	ENSMUST00000197973.2	321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATTTTGTTATGAAGAC	8301	False	NA	NA	False	NA	NA	NA	145584774	145585095	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_145584800_145585100
ENSMUST00000197984.5	chr9	+	3538	27	FSM	ENSMUSG00000032481.18	ENSMUST00000197984.5	3538	27	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_24	83.6874645091864	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCATAGTTCCTGGCTGT	2502	False	NA	16	True	ATTAAA	-26	NA	109961104	110064359	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ENSMUST00000198040.2	chr3	-	396	2	FSM	ENSMUSG00000106365.2	ENSMUST00000198040.2	396	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACAGCTCAATGGTGGAG	NA	False	NA	NA	False	AATAAA	-25	NA	122423312	122420859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_122421218_122423274
ENSMUST00000198051.5	chr3	+	2127	15	FSM	ENSMUSG00000027680.16	ENSMUST00000198051.5	2127	15	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_14	198.096296929405	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	4856	False	NA	20	True	ATTAAA	-23	NA	34074253	34123494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34123065
ENSMUST00000198066.5	chr5	+	3201	19	FSM	ENSMUSG00000014668.16	ENSMUST00000198066.5	3201	19	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	86.3223931292197	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTGTTGTACTCCTG	NA	False	NA	19	True	AATAAA	-19	NA	110283743	110319835	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ENSMUST00000198180.5	chr3	+	3849	19	FSM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	4600.96803991519	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACAATGACAAGGGTCAG	NA	False	NA	NA	False	NA	NA	NA	102927922	102965307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUST00000198201.5	chr9	+	930	6	FSM	ENSMUSG00000032478.15	ENSMUST00000198201.5	930	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	211.367547177896	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAGGCTGGCAGTACT	NA	False	NA	7	True	AATAAA	-14	NA	109661854	109672024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_109661876_109662263_109662364_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ENSMUST00000198311.5	chr3	+	2404	17	FSM	ENSMUSG00000027959.15	ENSMUST00000198311.5	2404	17	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_15	13.4290671213603	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAATCTGCCACCTGAGA	NA	False	NA	NA	False	NA	NA	NA	116388656	116422796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356
ENSMUST00000198322.5	chr3	-	3385	27	FSM	ENSMUSG00000042520.17	ENSMUST00000198322.5	3385	27	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	317.141774803389	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3567	False	NA	-9	True	AATAAA	-21	NA	89959762	89907446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89907561_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ENSMUST00000198334.2	chr5	-	520	3	FSM	ENSMUSG00000104529.5	ENSMUST00000198334.2	520	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	7.5	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTCGCCTCCTATTC	3477	False	NA	0	True	AATAAA	-19	NA	143151506	143150533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_143150848_143151184_143151305_143151420
ENSMUST00000198350.5	chr3	-	1399	10	FSM	ENSMUSG00000038975.15	ENSMUST00000198350.5	1399	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_9	303.195735987477	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6182	False	NA	-4	True	AATAAA	-44	NA	153618564	153612927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618550
ENSMUST00000198364.2	chr3	-	675	4	FSM	ENSMUSG00000105153.5	ENSMUST00000198364.2	675	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0.471404520791032	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTTGTTAAGCTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	34770811	34763771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_34764079_34764315_34764508_34768115_34768187_34770706
ENSMUST00000198386.5	chr3	+	1894	14	FSM	ENSMUSG00000027959.15	ENSMUST00000198386.5	1894	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	10.1538461538462	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGATGTCTGCAGCATCT	NA	False	NA	NA	False	TATAAA	-22	NA	116388630	116415251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031
ENSMUST00000198389.5	chr3	-	3020	7	FSM	ENSMUSG00000027708.15	ENSMUST00000198389.5	3020	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	72.6989607139531	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGTTAAGGTTGTTC	NA	False	NA	NA	False	TATAAA	-31	NA	35984223	35947654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35984094
ENSMUST00000198425.5	chr9	-	3968	23	FSM	ENSMUSG00000032480.18	ENSMUST00000198425.5	3968	23	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_20	140.114150629448	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946490	109913387	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
ENSMUST00000198509.2	chr3	-	776	1	FSM	ENSMUSG00000104960.2	ENSMUST00000198509.2	776	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	991	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGACTGTGTCCTGTTTCT	NA	False	NA	45	True	AATAAA	-18	NA	123301979	123301203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_123301200_123302000
ENSMUST00000198513.6	chr3	-	1146	7	FSM	ENSMUSG00000028029.12	ENSMUST00000198513.6	1146	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	349.626785142227	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTTTGATTCGTCT	NA	False	NA	2	True	TATAAA	-20	NA	132389883	132366241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389789
ENSMUST00000198526.5	chr5	-	3001	19	FSM	ENSMUSG00000037364.13	ENSMUST00000198526.5	3001	19	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	246.227361558879	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAACTGTGTGCTGTA	8510	False	NA	-14	True	AGTAAA	-16	NA	137305683	137293978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298010_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307
ENSMUST00000198693.2	chr5	+	428	2	FSM	ENSMUSG00000056367.15	ENSMUST00000198693.2	428	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTTGTTATCCCCCTGG	NA	False	NA	NA	False	NA	NA	NA	25965036	25982338	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_25965127_25982000
ENSMUST00000198700.2	chr3	-	1007	3	FSM	ENSMUSG00000005813.13	ENSMUST00000198700.2	1007	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	178.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAAGGTCTGGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	138174715	138165441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_138166262_138168125_138168192_138174594
ENSMUST00000198782.2	chr3	-	855	7	FSM	ENSMUSG00000027944.14	ENSMUST00000198782.2	855	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	657.328853940113	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCTTAAACAGAGGCCTT	7498	False	NA	NA	False	NA	NA	NA	89905696	89902931	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905631
ENSMUST00000198831.2	chr3	-	254	1	FSM	ENSMUSG00000106105.2	ENSMUST00000198831.2	254	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCCTGATTGAAGATGA	NA	False	NA	NA	False	NA	NA	NA	104823479	104823225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_104823200_104823500
ENSMUST00000198878.2	chr3	+	2050	13	FSM	ENSMUSG00000028173.11	ENSMUST00000198878.2	2050	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_12	7.78888096369861	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATTATTTCCGTTTAT	NA	False	NA	NA	False	NA	NA	NA	159545373	159644300	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886_159640006_159644090
ENSMUST00000198960.2	chr5	-	812	5	FSM	ENSMUSG00000033467.13	ENSMUST00000198960.2	812	5	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_3	269.602021505774	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAATGCGGCCAGCCATC	NA	False	NA	-13	True	NA	NA	NA	109704339	109702580	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_109702937_109703138_109703224_109703372_109703527_109703884_109704048_109704285
ENSMUST00000198968.2	chr3	+	2916	17	FSM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_15	114.842266146876	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474460	37633245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37584131_37584169_37632900
ENSMUST00000199001.2	chr3	-	573	1	FSM	ENSMUSG00000062006.13	ENSMUST00000199001.2	573	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1801	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTTCCGTTATCTGTGAT	NA	False	NA	-14	True	AATAAA	-17	NA	130521055	130520482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_130520500_130521100
ENSMUST00000199014.5	chr3	-	1280	6	FSM	ENSMUSG00000027944.14	ENSMUST00000199014.5	1280	6	0	0	0	0	multi-exon	FALSE	canonical	3	1706	junction_4	119.761429517186	6081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGTCTTAGTCTTGGTT	7201	False	NA	NA	False	AATAAA	-15	NA	89905993	89902763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89905311_89905834
ENSMUST00000199031.5	chr3	-	640	3	FSM	ENSMUSG00000090733.7	ENSMUST00000199031.5	640	3	0	0	0	0	multi-exon	FALSE	canonical	3	15374	junction_1	2726.5	9833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCTTGTTTAACTGG	NA	False	NA	-2	True	AATAAA	-19	NA	90120941	90119973	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90120061_90120240_90120352_90120499
ENSMUST00000199033.5	chr3	+	1127	11	FSM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	0	0	0	0	multi-exon	TRUE	canonical	3	509	junction_1	98.0487633782293	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGCATGTTACTGCC	NA	False	NA	49	True	ATTAAA	-23	NA	145281959	145309868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ENSMUST00000199041.2	chr3	+	1062	9	FSM	ENSMUSG00000036503.14	ENSMUST00000199041.2	1062	9	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_8	24.8281594162757	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTCTTCATACAATAGT	NA	False	NA	NA	False	AATAAA	-23	NA	57643540	57740653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384
ENSMUST00000199048.5	chr5	-	3532	24	FSM	ENSMUSG00000062234.15	ENSMUST00000199048.5	3532	24	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_22	75.7511097200465	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGAACTTGCCAGAGA	NA	False	NA	NA	False	NA	NA	NA	108777621	108719296	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108772895_108772958_108777366
ENSMUST00000199139.2	chr5	+	1252	1	FSM	ENSMUSG00000105954.2	ENSMUST00000199139.2	1252	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAACTACGACCATGA	NA	False	NA	NA	False	CATAAA	-10	NA	104582986	104584238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_104583000_104584200
ENSMUST00000199163.2	chr3	-	877	6	FSM	ENSMUSG00000027944.14	ENSMUST00000199163.2	877	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	683.893149548963	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCGCACTGTGGTAGACA	7207	False	NA	NA	False	AATATA	-30	NA	89905987	89903200	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905411_89905834
ENSMUST00000199195.3	chr14	+	463	4	FSM	ENSMUSG00000010406.13	ENSMUST00000199195.3	463	4	0	0	0	0	multi-exon	FALSE	canonical	3	1331	junction_1	96.858430482615	8766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGACTCTCTCTGGCTT	NA	False	NA	20	True	AATAAA	-21	NA	54664386	54667206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_54664549_54664627_54664696_54666040_54666106_54667038
ENSMUST00000199196.2	chr9	-	786	3	FSM	ENSMUSG00000032494.13	ENSMUST00000199196.2	786	3	0	0	0	0	multi-exon	FALSE	canonical	3	3873	junction_1	185	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCGCTTAATAAAACTTGC	NA	False	NA	NA	False	NA	NA	NA	110773939	110771709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_110771713_110772219_110772322_110773258
ENSMUST00000199243.5	chr5	-	2988	20	FSM	ENSMUSG00000037364.13	ENSMUST00000199243.5	2988	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	194.772841622735	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8265	False	NA	-8	True	AGTAAA	-22	NA	137305928	137293972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ENSMUST00000199317.2	chr3	+	743	4	FSM	ENSMUSG00000087260.6	ENSMUST00000199317.2	743	4	0	0	0	0	multi-exon	FALSE	canonical	3	1062	junction_2	64.8194072447099	5658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTCATTTCTGGTCT	3151	False	NA	12	True	AATAAA	-16	NA	107186314	107191398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_107186430_107187185_107187248_107189224_107189343_107190950
ENSMUST00000199322.5	chr5	+	4157	5	FSM	ENSMUSG00000007812.17	ENSMUST00000199322.5	4157	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	175.330402383614	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTAGACTCTTTGTTTTGA	1331	False	NA	15	True	NA	NA	NA	145168564	145184111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145179729_145179835_145180384
ENSMUST00000199406.5	chr5	-	2413	17	FSM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	528.705609099951	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959343	122925789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_122926082_122926364_122926528_122929670_122929799_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUST00000199420.5	chr3	+	4185	20	FSM	ENSMUSG00000068823.11	ENSMUST00000199420.5	4185	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	5440.27575987562	1611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	NA	False	NA	22	True	AATAAA	-25	NA	102927928	102965502	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_102927986_102936104_102936529_102943890_102944038_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUST00000199428.2	chr3	-	672	2	FSM	ENSMUSG00000090733.7	ENSMUST00000199428.2	672	2	0	0	0	0	multi-exon	FALSE	canonical	3	20827	junction_1	0	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTTTAGCACTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	90120953	90120133	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_90120352_90120499
ENSMUST00000199464.5	chr3	-	2037	16	FSM	ENSMUSG00000028107.15	ENSMUST00000199464.5	2037	16	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_13	192.904973727711	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662163	95647287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95660318_95660443_95661630_95661828_95662069
ENSMUST00000199549.4	chr15	-	108	1	FSM	ENSMUSG00000105167.4	ENSMUST00000199549.4	108	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTTTGAGGCCGACTT	3970	False	NA	NA	False	NA	NA	NA	79967155	79967047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79967000_79967200
ENSMUST00000199592.5	chr9	+	1304	7	FSM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	18.4157239577729	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGGAGGTTGTCTTT	2182	False	NA	7	True	AATAAA	-17	NA	110134240	110150391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ENSMUST00000199594.2	chr5	-	476	1	FSM	ENSMUSG00000105591.2	ENSMUST00000199594.2	476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	825	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCTTTCCCTCCT	8608	False	NA	NA	False	ATTAAA	-31	NA	108359300	108358824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_108358800_108359300
ENSMUST00000199613.5	chr3	+	738	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	0	0	0	0	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATTACTGTTCCTTTTT	NA	False	NA	-4	True	AATAAA	-3	NA	135144076	135171047	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUST00000199628.2	chr3	+	464	2	FSM	ENSMUSG00000038374.11	ENSMUST00000199628.2	464	2	0	0	0	0	multi-exon	FALSE	canonical	3	2531	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAATAGGACCTATG	8675	False	NA	NA	False	NA	NA	NA	96537288	96537870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_96537678_96537795
ENSMUST00000199633.2	chr3	-	643	3	FSM	ENSMUSG00000106223.2	ENSMUST00000199633.2	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	18	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGACTTGTTTAACTATT	NA	False	NA	-2	True	AATAAA	-27	NA	41482909	41476638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_41476891_41477364_41477680_41482833
ENSMUST00000199645.2	chr3	-	528	2	FSM	ENSMUSG00000104960.2	ENSMUST00000199645.2	528	2	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	0	8207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGACTGTGTCCTGTTT	NA	False	NA	43	True	AATAAA	-16	NA	123301982	123301205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_123301512_123301760
ENSMUST00000199674.5	chr3	+	3700	26	FSM	ENSMUSG00000027751.14	ENSMUST00000199674.5	3700	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	192.049968497784	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTTCATTTGTG	NA	False	NA	38	True	AATACA	-24	NA	54600245	54636187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_54600303_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622577_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54633390_54633497_54634989_54635118_54635764
ENSMUST00000199684.5	chr3	+	3636	13	FSM	ENSMUSG00000028060.15	ENSMUST00000199684.5	3636	13	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_11	83.5129730441125	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	3	True	NA	13	True	AATAAA	-14	NA	88593133	88620161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617164_88617250_88618067
ENSMUST00000199823.2	chr5	+	204	1	FSM	ENSMUSG00000105031.2	ENSMUST00000199823.2	204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAATCTTGCAGCTGGTG	NA	False	NA	-69	True	NA	NA	NA	113905183	113905387	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_113905200_113905400
ENSMUST00000199834.5	chr3	-	3494	26	FSM	ENSMUSG00000042520.17	ENSMUST00000199834.5	3494	26	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_21	230.048746138726	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3507	False	NA	-4	True	AATAAA	-19	NA	89959822	89913526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ENSMUST00000199878.5	chr3	+	2648	13	FSM	ENSMUSG00000028032.14	ENSMUST00000199878.5	2648	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	13.8531484588242	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGGTTTGTGTGCATA	NA	False	NA	6	True	AATAAA	-17	NA	131270656	131349431	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_131270745_131273262_131273440_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
ENSMUST00000199910.5	chr3	+	2610	4	FSM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	79.2001683499894	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	129326003	129428620	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_129326418_129398689_129398822_129421931_129422084_129426708
ENSMUST00000199937.5	chr5	+	2190	14	FSM	ENSMUSG00000029521.8	ENSMUST00000199937.5	2190	14	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_4	77.8046408010314	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	9182	False	NA	19	True	NA	NA	NA	110987848	111021999	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
ENSMUST00000199941.5	chr5	-	2804	4	FSM	ENSMUSG00000105987.5	ENSMUST00000199941.5	2804	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.05536398239638	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTGGTCTCGCTGATCC	5257	False	NA	NA	False	NA	NA	NA	23917664	23905646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_23908348_23915363_23915407_23916113_23916149_23917639
ENSMUST00000200086.5	chr3	+	2158	15	FSM	ENSMUSG00000027680.16	ENSMUST00000200086.5	2158	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	331.643780190094	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGGGGGAGGTGGGTG	4849	False	NA	46	True	AAAAAG	-44	NA	34074246	34123520	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_34074313_34093675_34093729_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ENSMUST00000200296.2	chr9	+	599	3	FSM	ENSMUSG00000019659.9	ENSMUST00000200296.2	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_1	13.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGAGGCCTGTTGTTTCA	6251	False	NA	10	True	AATAAA	-10	NA	110538961	110540655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_110539024_110539194_110539230_110540153
ENSMUST00000200298.2	chr5	+	2632	11	FSM	ENSMUSG00000050017.12	ENSMUST00000200298.2	2632	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	361.683231571495	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478672	111536225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111494985_111494994_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111534368
ENSMUST00000200314.5	chr5	-	588	2	FSM	ENSMUSG00000104529.5	ENSMUST00000200314.5	588	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTCGCCTCCTATTC	3525	False	NA	0	True	AATAAA	-19	NA	143151458	143150533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_143150848_143151184
ENSMUST00000200323.3	chr13	-	1128	8	FSM	ENSMUSG00000003062.14	ENSMUST00000200323.3	1128	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	267.855352374968	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCATGCCCCTGCTTT	NA	False	NA	-3	True	AATAAA	-18	NA	19579904	19549125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_19549516_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ENSMUST00000200441.5	chr3	+	2154	10	FSM	ENSMUSG00000027751.14	ENSMUST00000200441.5	2154	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	174.985713702576	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600243	54636183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_54600281_54600523_54600630_54602543_54602560_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ENSMUST00000200466.5	chr13	+	3224	21	FSM	ENSMUSG00000021314.14	ENSMUST00000200466.5	3224	21	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_16	10.4957134107215	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTACATGGGTTCTTTT	NA	False	NA	10	True	AATAAA	-15	NA	19132520	19335082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305502_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
ENSMUST00000200497.5	chr3	+	2573	10	FSM	ENSMUSG00000036503.14	ENSMUST00000200497.5	2573	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_9	52	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTGTTGAGTTTTTT	NA	False	NA	NA	False	AAGAAA	-44	NA	57643502	57742654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740993
ENSMUST00000200517.2	chr3	-	1232	3	FSM	ENSMUSG00000062006.13	ENSMUST00000200517.2	1232	3	0	0	0	0	multi-exon	FALSE	canonical	3	8385	junction_1	618	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAAAGTCCTTATGAGAC	NA	False	NA	NA	False	NA	NA	NA	130523995	130522486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_130522501_130522699_130522800_130522877
ENSMUST00000200524.5	chr3	+	2552	20	FSM	ENSMUSG00000028034.16	ENSMUST00000200524.5	2552	20	0	0	0	0	multi-exon	FALSE	canonical	1	74	junction_19	393.500738277491	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916118	151938409	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151937891
ENSMUST00000200525.2	chr3	+	293	1	FSM	ENSMUSG00000104803.2	ENSMUST00000200525.2	293	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTCGGCCGATGGGCTG	NA	False	NA	NA	False	NA	NA	NA	115707538	115707831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_115707500_115707800
ENSMUST00000200566.5	chr5	+	1422	8	FSM	ENSMUSG00000029089.9	ENSMUST00000200566.5	1422	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	26.2717354134182	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAGTTCTACATATATG	NA	False	NA	14	True	ATTAAA	-22	NA	48529774	48546188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48536671_48536807_48537465_48537574_48539128_48539210_48545444
ENSMUST00000200645.5	chr5	-	2404	17	FSM	ENSMUSG00000029472.14	ENSMUST00000200645.5	2404	17	0	0	0	0	multi-exon	FALSE	canonical	3	855	junction_8	345.39967790952	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGAAGTGGGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	122959357	122925793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUST00000200657.5	chr5	-	1668	10	FSM	ENSMUSG00000035234.19	ENSMUST00000200657.5	1668	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	36.8299395118217	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAATATCTTATTTTT	NA	False	NA	-3	True	AATAAA	-19	NA	100968806	100953057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_100953318_100953763_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ENSMUST00000200730.4	chr5	+	2019	16	FSM	ENSMUSG00000029146.15	ENSMUST00000200730.4	2019	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	132.900564332888	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTACCTTTGGTTCCCTC	NA	False	NA	15	True	ATTAAA	-15	NA	31350637	31356238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352549_31352624_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ENSMUST00000200744.4	chr5	-	1653	7	FSM	ENSMUSG00000107283.4	ENSMUST00000200744.4	1653	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	140.104722737434	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAATTGTGTCTTTA	NA	False	NA	NA	False	TTTAAA	-4	NA	31311566	31298006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31299195_31302043_31302097_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
ENSMUST00000200889.4	chr10	+	2384	4	FSM	ENSMUSG00000096795.5	ENSMUST00000200889.4	2384	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	8.5764535535124	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATACTGCCATCCATT	NA	False	NA	NA	False	AATAAA	-23	NA	81540658	81557810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_81540735_81554752_81554880_81555078_81555140_81555690
ENSMUST00000200935.4	chr5	+	1139	8	FSM	ENSMUSG00000029152.14	ENSMUST00000200935.4	1139	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	334.9632937551	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	15	True	AATAAA	-16	NA	73450237	73471284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73470785
ENSMUST00000200942.2	chr5	+	840	7	FSM	ENSMUSG00000013622.16	ENSMUST00000200942.2	840	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	101.141402666432	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGCTGCCGTACCTGT	932	False	NA	7	True	AATAAA	-20	NA	31206002	31211962	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31206101_31206805_31206828_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
ENSMUST00000200948.2	chr7	-	1430	3	FSM	ENSMUSG00000030680.7	ENSMUST00000200948.2	1430	3	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	10	558	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTCAGGAGGCAGAGGCA	9430	False	NA	-2	True	NA	NA	NA	126616524	126614204	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126614642_126615371_126615455_126615614
ENSMUST00000201011.2	chr16	+	914	6	FSM	ENSMUSG00000052917.16	ENSMUST00000201011.2	914	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	10.507140429251	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGCCTTGCTAGCC	NA	False	NA	NA	False	ACTAAA	-17	NA	55895842	55946783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_55895942_55902718_55902772_55917702_55917795_55931968_55932167_55944141_55944334_55946503
ENSMUST00000201125.4	chr5	+	1352	9	FSM	ENSMUSG00000006638.16	ENSMUST00000201125.4	1352	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	7.48331477354788	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCTGAGGTTCCCTTTCC	NA	False	NA	19	True	ATTAAA	-21	NA	31107409	31112435	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31107593_31110228_31110390_31110686_31110870_31111010_31111057_31111222_31111336_31111434_31111610_31111748_31111798_31111877_31112044_31112159
ENSMUST00000201128.2	chr5	+	1081	3	FSM	ENSMUSG00000106820.2	ENSMUST00000201128.2	1081	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	30.5	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGAGTTGTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	147355410	147359854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_147355512_147357439_147357607_147359041
ENSMUST00000201185.4	chr2	+	2607	18	FSM	ENSMUSG00000026879.15	ENSMUST00000201185.4	2607	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	7.49855810822468	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCCCCAGGTGTCTCA	NA	False	NA	NA	False	AATAAA	-15	NA	35146391	35197902	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_35146486_35156831_35156916_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
ENSMUST00000201202.4	chr5	+	715	6	FSM	ENSMUSG00000052139.19	ENSMUST00000201202.4	715	6	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_3	63.9606128801155	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTGATCGTTTAGCT	5882	False	NA	NA	False	AATAAA	-14	NA	31855357	31988560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428
ENSMUST00000201286.4	chr10	+	2634	4	FSM	ENSMUSG00000078435.6	ENSMUST00000201286.4	2634	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	1.24721912892465	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTTTCTGTTTCTCCA	NA	False	NA	NA	False	AATAAA	-17	NA	81963846	81988899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_81963933_81974086_81974214_81986050_81986112_81986539
ENSMUST00000201333.4	chr5	+	1027	6	FSM	ENSMUSG00000029149.15	ENSMUST00000201333.4	1027	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	7.52063827078527	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTGATTACAGTT	NA	False	NA	4	True	AATAAA	-16	NA	31409034	31410541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410437
ENSMUST00000201414.5	chr5	+	2588	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	0	0	0	0	multi-exon	TRUE	canonical	3	3618	junction_3	465.957308149311	2266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTTGAAATGACTGAAA	NA	False	NA	38	True	AATAAA	-30	NA	129864061	129875212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ENSMUST00000201422.4	chr5	-	1697	8	FSM	ENSMUSG00000029128.13	ENSMUST00000201422.4	1697	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	195.851880725393	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGGGATTTTCATT	NA	False	NA	-4	True	AATAAA	-14	NA	41865464	41782318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_41783206_41784329_41784425_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ENSMUST00000201448.4	chr6	-	2669	14	FSM	ENSMUSG00000029924.13	ENSMUST00000201448.4	2669	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	72.7375113825747	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTGCTTAAGCTTGACA	NA	False	NA	-7	True	AATAAA	-26	NA	39354606	39312918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ENSMUST00000201491.2	chr5	-	923	7	FSM	ENSMUSG00000107283.4	ENSMUST00000201491.2	923	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	59.0705792534095	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGAGATGGTGCAGTGA	NA	False	NA	NA	False	NA	NA	NA	31311565	31301617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
ENSMUST00000201534.2	chr5	-	1287	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201534.2	1287	8	0	0	0	0	multi-exon	FALSE	canonical	3	922	junction_1	63.5022095067951	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGTCATTAGTGTGACA	NA	False	NA	-3	True	ATTAAA	-24	NA	135378897	135366219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ENSMUST00000201556.4	chr5	+	999	7	FSM	ENSMUSG00000029152.14	ENSMUST00000201556.4	999	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	363.453535162643	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGATGAATAAAATGTAAAA	NA	False	NA	-12	True	ATTAAA	-39	NA	73450174	73471257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73470785
ENSMUST00000201563.4	chr13	-	2640	3	FSM	ENSMUSG00000072066.8	ENSMUST00000201563.4	2640	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	2	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGCTAATATCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	62771996	62750826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62753195_62755186_62755314_62771851
ENSMUST00000201603.2	chr6	+	420	2	FSM	ENSMUSG00000030347.7	ENSMUST00000201603.2	420	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTAATTCAAAGCCAGCA	NA	False	NA	NA	False	NA	NA	NA	126916933	126919638	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_126916990_126919274
ENSMUST00000201625.4	chr5	+	902	7	FSM	ENSMUSG00000029149.15	ENSMUST00000201625.4	902	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	34.830143394607	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATTACAGTTACTTG	NA	False	NA	9	True	AATAAA	-21	NA	31409065	31410546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31409159_31409262_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410352_31410437
ENSMUST00000201710.4	chr7	-	2565	10	FSM	ENSMUSG00000019082.19	ENSMUST00000201710.4	2565	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	40.6256623877623	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCTTTAAGAGTCTGT	462	False	NA	-19	True	AATAAA	-18	NA	141017550	141009661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017467
ENSMUST00000201739.2	chr5	+	798	5	FSM	ENSMUSG00000029152.14	ENSMUST00000201739.2	798	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	414.398660712122	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	15	True	AATAAA	-16	NA	73452345	73471284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_73452350_73458006_73458061_73464008_73464097_73467616_73467770_73470785
ENSMUST00000201784.4	chr5	-	1235	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201784.4	1235	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	331.894438590566	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGTCATTAGTGTGACA	NA	False	NA	-3	True	ATTAAA	-24	NA	135378729	135366219	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378672
ENSMUST00000201791.4	chr5	-	1297	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201791.4	1297	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	339.384075967639	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCAGTACAATTCATTG	NA	False	NA	-1	True	AATAAA	-20	NA	135378868	135320557	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ENSMUST00000201801.4	chr5	-	2272	11	FSM	ENSMUSG00000025534.18	ENSMUST00000201801.4	2272	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	32.1249124512426	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAACTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	130031669	130017863	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029597_130029784_130031447
ENSMUST00000201887.4	chr5	+	1696	5	FSM	ENSMUSG00000013622.16	ENSMUST00000201887.4	1696	5	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_4	26.2202212042538	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAATGCTGCCGTACCTG	594	False	NA	6	True	AATAAA	-19	NA	31205664	31211961	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31206101_31206805_31206925_31209540_31210229_31211304_31211403_31211606
ENSMUST00000201912.4	chr5	+	5485	13	FSM	ENSMUSG00000039191.13	ENSMUST00000201912.4	5485	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	213.221324762167	1766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGATGTCTTCTGTGGGA	NA	False	NA	16	True	AATAAA	-22	NA	53747709	53814704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_53747829_53758042_53758093_53758174_53758305_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUST00000201937.4	chr5	+	889	7	FSM	ENSMUSG00000029149.15	ENSMUST00000201937.4	889	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	11.9361728465293	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTGATTACAGTT	NA	False	NA	4	True	AATAAA	-16	NA	31409068	31410541	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31409159_31409262_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410437
ENSMUST00000201958.4	chr5	+	2242	21	FSM	ENSMUSG00000039178.10	ENSMUST00000201958.4	2242	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	19.8148303045976	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACAGATATCTCTAATAA	NA	False	NA	NA	False	ATTAAA	-20	NA	53966995	54061305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_53967201_53986691_53986765_53987796_53987841_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ENSMUST00000201980.5	chr5	-	3097	6	FSM	ENSMUSG00000023452.20	ENSMUST00000201980.5	3097	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	330.561098739704	2038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTACCGTAGCTTTGT	7834	False	NA	NA	False	ATTAAA	-11	NA	32899819	32893652	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_32895491_32895731_32895879_32896125_32896718_32897967_32898134_32898388_32898477_32899553
ENSMUST00000202154.2	chr5	-	268	3	FSM	ENSMUSG00000107111.2	ENSMUST00000202154.2	268	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGCATAGAAACTGGTTG	2897	False	NA	NA	False	NA	NA	NA	53704664	53703692	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_53703801_53703968_53704074_53704609
ENSMUST00000202155.2	chr5	+	3707	22	FSM	ENSMUSG00000029407.11	ENSMUST00000202155.2	3707	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	137.493021880238	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGTCATTGTTCCCT	NA	False	NA	13	True	AATAAA	-21	NA	92285804	92350657	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92347675_92347784_92348993_92349210_92349715
ENSMUST00000202243.4	chr5	+	839	5	FSM	ENSMUSG00000106918.4	ENSMUST00000202243.4	839	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	45.0832563153994	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATATCTCTATTCTTTA	NA	False	NA	NA	False	AATAAA	-24	NA	31771315	31812205	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31771367_31773724_31773832_31786959_31787065_31807646_31807829_31811811
ENSMUST00000202250.4	chr5	+	800	8	FSM	ENSMUSG00000029152.14	ENSMUST00000202250.4	800	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	366.22843323003	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTTATGGTCCAACGT	NA	False	NA	NA	False	AATGAA	-5	NA	73450149	73464123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_73450320_73451308_73451354_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920
ENSMUST00000202254.4	chr5	-	4718	18	FSM	ENSMUSG00000106864.4	ENSMUST00000202254.4	4718	18	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_17	85.762849975885	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGGCTTGTCCTG	NA	False	NA	-26	True	AATAAA	-19	NA	31337476	31313348	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ENSMUST00000202258.4	chr5	-	1884	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92231517	92202358	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ENSMUST00000202281.4	chr16	-	1355	11	FSM	ENSMUSG00000022540.17	ENSMUST00000202281.4	1355	11	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_7	47.5572286829247	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831381	4826593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
ENSMUST00000202306.2	chr18	+	398	2	FSM	ENSMUSG00000024472.10	ENSMUST00000202306.2	398	2	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	0	530	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCCCCTTTTTGTTTTTC	NA	False	NA	13	True	AATAAA	-14	NA	44513568	44529152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_44513754_44528939
ENSMUST00000202361.4	chr5	-	3802	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	0	0	0	0	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGTTCTTTTGTTGTC	NA	False	NA	11	True	TTTAAA	-13	NA	149559803	149540008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ENSMUST00000202417.2	chr6	-	3296	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	41.7378724901018	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAATCTTAACAATA	7646	False	NA	NA	False	AAAAAG	-28	NA	35110659	35021930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ENSMUST00000202535.4	chr7	+	3112	4	FSM	ENSMUSG00000064194.11	ENSMUST00000202535.4	3112	4	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	65.2226954364813	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATTTTTAATTATG	NA	False	NA	NA	False	AATGAA	-10	NA	42827011	42841533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725
ENSMUST00000202556.4	chr5	-	3078	18	FSM	ENSMUSG00000006641.13	ENSMUST00000202556.4	3078	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	33.6216481587904	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGGCCTCTGTGTTCC	803	False	NA	-2	True	AATAAA	-18	NA	31205353	31193380	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201926_31204973_31205144_31205309
ENSMUST00000202567.2	chr5	-	1869	8	FSM	ENSMUSG00000045302.14	ENSMUST00000202567.2	1869	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	89.9026684582742	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117624	31112386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31113082_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
ENSMUST00000202583.2	chr5	+	299	2	FSM	ENSMUSG00000106674.2	ENSMUST00000202583.2	299	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGCAAGAGTAAACTTG	NA	False	NA	NA	False	AATAAA	-18	NA	149565074	149571255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_149565217_149571098
ENSMUST00000202601.4	chr5	+	890	6	FSM	ENSMUSG00000029203.17	ENSMUST00000202601.4	890	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	546.724427842766	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATACTTTTAATTTT	NA	False	NA	20	True	AATAAA	-31	NA	65694676	65752488	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_65694890_65723331_65723426_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUST00000202639.4	chr5	-	4200	21	FSM	ENSMUSG00000106864.4	ENSMUST00000202639.4	4200	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	217.628261032431	1502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTAGAACCCAATAATG	NA	False	NA	66	True	ATTAAA	-24	NA	31337461	31313864	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31333838_31333901_31337227
ENSMUST00000202645.4	chr13	-	1406	4	FSM	ENSMUSG00000069208.10	ENSMUST00000202645.4	1406	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	20.237478982214	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGGTCATGATGTCTAT	NA	False	NA	NA	False	NA	NA	NA	74642089	74628172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74641968
ENSMUST00000202692.5	chr8	+	2364	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	17.1075032271418	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAATATATAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	4663166	4680231	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
ENSMUST00000202758.4	chr5	-	1767	13	FSM	ENSMUSG00000029145.13	ENSMUST00000202758.4	1767	13	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_12	179.460688979199	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGACTCTGCTGCCT	NA	False	NA	-9	True	AATAAA	-15	NA	31350352	31344910	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350163
ENSMUST00000202798.2	chr7	-	1412	3	FSM	ENSMUSG00000107068.2	ENSMUST00000202798.2	1412	3	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	10	561	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCACGCCTTTAATCCCAGC	9430	False	NA	-20	True	AATAAA	-28	NA	126616524	126614222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126614642_126615371_126615455_126615614
ENSMUST00000202803.4	chr6	+	716	5	FSM	ENSMUSG00000054226.14	ENSMUST00000202803.4	716	5	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	23.847169643377	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGGACTCATTACATTT	3409	False	NA	NA	False	TATAAA	-35	NA	85892719	85905077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789
ENSMUST00000202898.2	chr6	+	2409	15	FSM	ENSMUSG00000038759.16	ENSMUST00000202898.2	2409	15	0	0	0	0	multi-exon	FALSE	canonical	2	193	junction_5	41.0390555645796	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTTATTCCTTCTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	35154550	35182588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259
ENSMUST00000202913.2	chr5	-	863	7	FSM	ENSMUSG00000029128.13	ENSMUST00000202913.2	863	7	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	193.008419505471	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTTTGGGATTTTCAT	NA	False	NA	-5	True	AATAAA	-13	NA	41865500	41782319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_41782432_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ENSMUST00000202950.4	chr5	+	2499	14	FSM	ENSMUSG00000029141.17	ENSMUST00000202950.4	2499	14	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_11	21.8978262140197	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGATGATCATTCCC	NA	False	NA	11	True	AGTAAA	-21	NA	31684355	31711386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31703523_31703611_31705954_31706026_31708056_31708127_31711082
ENSMUST00000202953.2	chr5	+	367	2	FSM	ENSMUSG00000106918.4	ENSMUST00000202953.2	367	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCTCTTAGAGGTAT	9470	False	NA	19	True	AATAAA	-22	NA	31756076	31779988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_31756176_31779720
ENSMUST00000202991.4	chrX	+	715	6	FSM	ENSMUSG00000016308.13	ENSMUST00000202991.4	715	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	341.941749425249	4124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTTCTGTCTTCCC	NA	False	NA	23	True	ATTAAA	-15	NA	36137983	36146903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146260_36146341_36146664
ENSMUST00000203077.3	chr6	+	1617	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	0	0	0	0	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	9852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTCACTTCATTTGT	5872	False	NA	37	True	AATATA	-25	NA	67243994	67261295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUST00000203164.3	chr6	-	2442	5	FSM	ENSMUSG00000039985.15	ENSMUST00000203164.3	2442	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	951.515238974132	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148834647	148822554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_148824529_148827510_148827604_148830006_148830134_148832048_148832149_148834499
ENSMUST00000203220.3	chr6	-	1638	11	FSM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	0	0	0	0	multi-exon	FALSE	canonical	3	5712	junction_10	720.046137410652	1992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446752	51439739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUST00000203238.2	chr6	-	381	3	FSM	ENSMUSG00000004268.12	ENSMUST00000203238.2	381	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	657.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAAGCCGGAGAAACCTT	NA	False	NA	NA	False	NA	NA	NA	124689020	124682122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124682180_124682477_124682620_124688838
ENSMUST00000203371.3	chr6	+	4000	18	FSM	ENSMUSG00000042810.15	ENSMUST00000203371.3	4000	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	17.5193417581865	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAAGGCCATTGGCTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	48372565	48393833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48382170_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ENSMUST00000203449.2	chr6	-	479	2	FSM	ENSMUSG00000107479.2	ENSMUST00000203449.2	479	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGAGTTGCTGTGGCCAT	NA	False	NA	NA	False	NA	NA	NA	66442722	66431177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_66431429_66442494
ENSMUST00000203471.3	chr5	-	3952	25	FSM	ENSMUSG00000029191.17	ENSMUST00000203471.3	3952	25	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	103.759328563213	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCACCTGGAGCCGAGT	-14	True	NA	NA	False	AATAAA	-16	NA	65492961	65419944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ENSMUST00000203578.3	chr6	+	1323	5	FSM	ENSMUSG00000079426.14	ENSMUST00000203578.3	1323	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	519.345922772096	2283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTGTGCTCTGTGTGGG	NA	False	NA	38	True	ATTAAA	-30	NA	113355107	113366613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113355170_113358923_113359036_113361042_113361139_113362450_113362622_113365731
ENSMUST00000203607.2	chr6	+	2240	2	FSM	ENSMUSG00000030087.12	ENSMUST00000203607.2	2240	2	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTACCATTTTTTGGCCCT	NA	False	NA	25	True	AATAAA	-21	NA	90443381	90452217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_90444506_90451101
ENSMUST00000203632.2	chr6	+	534	4	FSM	ENSMUSG00000052738.15	ENSMUST00000203632.2	534	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	690.823823818747	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTGGCTGTGAAGACTT	2593	False	NA	12	True	AATAAA	-16	NA	73225642	73253887	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_73225737_73233153_73233258_73252259_73252373_73253664
ENSMUST00000203649.3	chr6	-	2600	7	FSM	ENSMUSG00000029735.18	ENSMUST00000203649.3	2600	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	15.5929114949354	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCATTGTTTCTGTTCA	NA	False	NA	-78	True	NA	NA	NA	43602900	43322006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43602626
ENSMUST00000203680.2	chr6	-	711	4	FSM	ENSMUSG00000029814.11	ENSMUST00000203680.2	711	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	219.654273803175	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTCCT	NA	False	NA	-3	True	ATTAAA	-22	NA	49191638	49144846	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_49145040_49145403_49145453_49190200_49190262_49191230
ENSMUST00000203762.4	chr6	-	498	4	FSM	ENSMUSG00000032641.19	ENSMUST00000203762.4	498	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	13.9124245031395	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCGCTTTGTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	134864731	134847211	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_134847407_134854179_134854298_134863853_134863900_134864592
ENSMUST00000203783.3	chr6	-	835	5	FSM	ENSMUSG00000019210.11	ENSMUST00000203783.3	835	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	454.901362934867	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTGGATTTAGTTGTT	NA	False	NA	-13	True	ATTAAA	-9	NA	120795360	120772214	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_120772726_120781012_120781094_120784546_120784614_120785322_120785433_120795294
ENSMUST00000203820.3	chr6	-	2090	9	FSM	ENSMUSG00000029817.12	ENSMUST00000203820.3	2090	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	190.764866720788	1672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTTG	4612	False	NA	-4	True	AATAAA	-15	NA	49240945	49220857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49229736_49230043_49240771
ENSMUST00000203891.3	chr6	+	3968	24	FSM	ENSMUSG00000030016.15	ENSMUST00000203891.3	3968	24	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_21	84.1844450831081	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83905836	83963853	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83960957_83961057_83961758_83961878_83963539
ENSMUST00000203895.3	chr3	+	3320	16	FSM	ENSMUSG00000025758.11	ENSMUST00000203895.3	3320	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	89.82788480694	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGTAAATAATGTATT	7808	False	NA	NA	False	AAAACA	-16	NA	40754476	40771186	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759446_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ENSMUST00000203915.3	chr6	+	1491	12	FSM	ENSMUSG00000068328.11	ENSMUST00000203915.4	1491	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	313.3608012109	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTCTGTTGCCTCT	5423	False	NA	5	True	ATTAAA	-15	NA	83031711	83034659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034194_83034376_83034478
ENSMUST00000203954.3	chr6	-	1703	13	FSM	ENSMUSG00000004980.17	ENSMUST00000203954.3	1703	13	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_2	3043.32879243911	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446827	51438100	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ENSMUST00000203964.2	chr2	-	1628	1	FSM	ENSMUSG00000107535.2	ENSMUST00000203964.2	1628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	870	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	38456366	38454738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_38454700_38456400
ENSMUST00000204081.2	chr6	+	907	5	FSM	ENSMUSG00000059659.8	ENSMUST00000204081.2	907	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	4.26468052730799	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAATTGTTATTCACTT	NA	False	NA	NA	False	AATGAA	-14	NA	128416301	128480244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_128416351_128416477_128416660_128465853_128466007_128479128_128479327_128479919
ENSMUST00000204084.3	chr6	-	409	4	FSM	ENSMUSG00000029632.8	ENSMUST00000204084.3	409	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	4235.12888430407	3478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCACTATTTAATGC	59	False	NA	-11	True	AATAAA	-15	NA	11907392	11900370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_11900591_11905200_11905262_11906018_11906077_11907322
ENSMUST00000204158.3	chr6	-	1542	11	FSM	ENSMUSG00000004980.17	ENSMUST00000204158.3	1542	11	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_2	2968.11001312283	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446825	51438103	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUST00000204188.3	chr6	-	1518	10	FSM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_3	2022.94680547408	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446752	51439739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUST00000204189.3	chr6	-	1777	8	FSM	ENSMUSG00000029817.12	ENSMUST00000204189.3	1777	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	153.460491492044	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTTG	4613	False	NA	-4	True	AATAAA	-15	NA	49240944	49220857	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_49221666_49221801_49221870_49222415_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
ENSMUST00000204242.2	chr6	+	789	1	FSM	ENSMUSG00000063171.5	ENSMUST00000204242.2	789	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3407	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGACTCTGAGGGACATT	NA	False	NA	-25	True	NA	NA	NA	148256207	148256996	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_148256200_148257000
ENSMUST00000204254.2	chr6	+	1147	2	FSM	ENSMUSG00000051256.11	ENSMUST00000204254.2	1147	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	2593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTAAGACTGTCCTGTG	NA	False	NA	13	True	AATAAA	-17	NA	113419570	113425170	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113419766_113424218
ENSMUST00000204288.2	chr6	-	429	2	FSM	ENSMUSG00000107689.2	ENSMUST00000204288.2	429	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	921	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGACTGGCCTTAACACC	4539	False	NA	NA	False	NA	NA	NA	86493255	86490872	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_86491051_86493004
ENSMUST00000204293.3	chr6	+	1336	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	0	0	0	0	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	1792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5871	False	NA	19	True	NA	NA	NA	67243993	67261031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUST00000204343.3	chr6	+	1265	11	FSM	ENSMUSG00000068328.11	ENSMUST00000204343.4	1265	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	333.699805214207	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5440	False	NA	9	True	ATTAAA	-19	NA	83031728	83034663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83031814_83031891_83032030_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUST00000204380.3	chr6	+	746	4	FSM	ENSMUSG00000057278.9	ENSMUST00000204380.3	746	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1590.13130135708	5945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTTCTGCTGTTGTGGA	NA	False	NA	29	True	AATAAA	-20	NA	86348552	86355889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_86348976_86352658_86352682_86353476_86353602_86355714
ENSMUST00000204436.3	chr6	+	1687	3	FSM	ENSMUSG00000053012.18	ENSMUST00000204436.3	1687	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	14.5	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTGTGTCAGTGCT	NA	False	NA	6	True	AATAAA	-18	NA	71248660	71262303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_71248825_71259134_71259302_71260947
ENSMUST00000204465.2	chr5	+	931	4	FSM	ENSMUSG00000061461.12	ENSMUST00000204465.2	931	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	153.686549689801	2080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGGTGTGTACTGTT	3446	False	NA	13	True	ATTAAA	-14	NA	53424518	53435882	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_53424701_53425364_53425413_53434484_53434542_53435238
ENSMUST00000204530.2	chr6	+	1573	2	FSM	ENSMUSG00000094973.3	ENSMUST00000204530.2	1573	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAAAGTAAATAGCA	NA	False	NA	NA	False	ATTAAA	-41	NA	136304536	136306981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_136304647_136305518
ENSMUST00000204620.3	chr6	+	4179	22	FSM	ENSMUSG00000029920.10	ENSMUST00000204620.3	4179	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	92.9906000662447	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTTGTTAATTATTGTA	2331	False	NA	NA	False	AATAAA	-16	NA	65020196	65092582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_65020430_65029603_65029782_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ENSMUST00000204653.3	chr6	-	2175	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	0	0	0	0	multi-exon	FALSE	canonical	3	7593	junction_2	1716.19673988736	23030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	AGTAAA	-12	NA	87828088	87819596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
ENSMUST00000204696.3	chr6	+	734	3	FSM	ENSMUSG00000029920.10	ENSMUST00000204696.3	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	64	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGCAGAGCATTATGGA	1954	False	NA	5	True	AATAAA	-15	NA	65019819	65021187	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_65019946_65020189_65020430_65020819
ENSMUST00000204714.2	chr6	-	452	5	FSM	ENSMUSG00000029632.8	ENSMUST00000204714.2	452	5	0	0	0	0	multi-exon	FALSE	canonical	3	1509	junction_4	3332.42722163591	42577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGCGTGTCACTATTTA	NA	False	NA	-15	True	AATAAA	-11	NA	11907496	11900374	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_11900591_11905200_11905262_11906018_11906108_11907322_11907384_11907471
ENSMUST00000204778.3	chr6	-	3382	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_9	27.4919180043073	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATGATGCTAATAATT	828	False	NA	-5	True	AATAAA	-18	NA	51989529	51834401	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ENSMUST00000204796.3	chr6	+	3025	23	FSM	ENSMUSG00000030088.16	ENSMUST00000204796.3	3025	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	54.8271513843791	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCCTACACTTTGTGTC	NA	False	NA	4	True	AATAAA	-14	NA	90527829	90576142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_90527953_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546551_90546826_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ENSMUST00000204885.2	chr6	-	1554	2	FSM	ENSMUSG00000004980.17	ENSMUST00000204885.2	1554	2	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_1	0	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAATACTTTTGTATC	NA	False	NA	-45	True	AATACA	-9	NA	51440164	51438124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_51438414_51438899
ENSMUST00000204890.3	chr6	-	1614	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204890.3	1614	5	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_3	4411.10218652889	14866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828012	87820063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822655_87822776_87827885
ENSMUST00000204895.3	chr6	+	1826	10	FSM	ENSMUSG00000068328.11	ENSMUST00000204895.3	1826	10	0	0	0	0	multi-exon	FALSE	canonical	3	960	junction_8	79.6814646104672	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGCCTCTTTGGGTTT	5338	False	NA	13	True	ATTAAA	-23	NA	83031626	83034667	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUST00000204915.2	chr6	+	294	2	FSM	ENSMUSG00000033933.14	ENSMUST00000204915.2	294	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCTACTGTGTTGTG	1709	False	NA	13	True	AATAAA	-13	NA	113606467	113608588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_113606603_113608429
ENSMUST00000204965.3	chr5	-	4751	25	FSM	ENSMUSG00000029191.17	ENSMUST00000204965.3	4751	25	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_12	80.615847887097	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	NA	False	NA	-4	True	AATAAA	-19	NA	65493013	65419194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ENSMUST00000204978.3	chr6	-	610	4	FSM	ENSMUSG00000029632.8	ENSMUST00000204978.3	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	8511	junction_2	453.262494465281	42896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTTGAATTTCTCTTA	-31	True	NA	69	True	ACTAAA	-17	NA	11907482	11900290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_11900591_11905200_11905262_11906018_11906108_11907322
ENSMUST00000205002.3	chr6	-	1445	11	FSM	ENSMUSG00000000399.11	ENSMUST00000205002.3	1445	11	0	0	0	0	multi-exon	FALSE	canonical	3	1115	junction_7	83.3223259396904	5262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGATCTGAATTCACTC	NA	False	NA	NA	False	TATAAA	-19	NA	126826088	126798683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826026
ENSMUST00000205091.3	chr6	+	1166	7	FSM	ENSMUSG00000036371.7	ENSMUST00000205091.3	1166	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	2347.58275797799	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5872	False	NA	19	True	NA	NA	NA	67243994	67261031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_67244394_67248181_67248305_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUST00000205092.3	chr6	+	643	4	FSM	ENSMUSG00000029920.10	ENSMUST00000205092.3	643	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	202.468653266513	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	4798	False	NA	NA	False	NA	NA	NA	65029766	65044422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_65029782_65033386_65033556_65035049_65035117_65044030
ENSMUST00000205106.3	chr6	+	1288	7	FSM	ENSMUSG00000036371.7	ENSMUST00000205106.3	1288	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2366.15668801164	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACTGTCATTCATACCA	5866	False	NA	38	True	NA	NA	NA	67243988	67261050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUST00000205118.3	chr6	+	600	3	FSM	ENSMUSG00000029920.10	ENSMUST00000205118.3	600	3	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	73	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTTTGGAAATCTCCA	1785	False	NA	-67	True	AATAAA	-25	NA	65019650	65021115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_65019715_65020189_65020430_65020819
ENSMUST00000205119.3	chr6	-	4149	25	FSM	ENSMUSG00000030279.16	ENSMUST00000205119.3	4149	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	43.1125585918226	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAACTCTTTGCCTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	143045816	142956650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143036324_143036412_143045403_143045523_143045658
ENSMUST00000205179.3	chr6	-	2208	8	FSM	ENSMUSG00000033216.10	ENSMUST00000205179.3	2208	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	203.93836603949	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTAGTGTGCCCATAGT	NA	False	NA	-17	True	AATAAA	-12	NA	88423509	88234854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_88235374_88249003_88249084_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ENSMUST00000205185.2	chr7	-	3361	10	FSM	ENSMUSG00000054753.10	ENSMUST00000205185.2	3361	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	78.9427046489031	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	2665	False	NA	87	True	NA	NA	NA	3214331	3204497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722
ENSMUST00000205255.3	chr6	+	3657	19	FSM	ENSMUSG00000030231.12	ENSMUST00000205255.3	3657	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	27.8989025847272	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	1070	False	NA	17	True	AATAAA	-17	NA	140480900	140542836	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_140481087_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525152_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
ENSMUST00000205269.2	chr6	-	1161	3	FSM	ENSMUSG00000063884.7	ENSMUST00000205269.2	1161	3	0	0	0	0	multi-exon	FALSE	canonical	3	959	junction_1	68	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	NA	False	NA	-1	True	AATAAA	-28	NA	71859579	71857621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_71858216_71858489_71858649_71859171
ENSMUST00000205287.2	chr7	+	1375	6	FSM	ENSMUSG00000035585.17	ENSMUST00000205287.2	1375	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	529.055913869224	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTGTTCTTTATTTT	2173	False	NA	NA	False	NA	NA	NA	3696761	3703886	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3703526
ENSMUST00000205316.2	chr7	-	2912	7	FSM	ENSMUSG00000042502.11	ENSMUST00000205316.2	2912	7	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_6	218.502034061216	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTGGTAATTTAATAAA	5471	False	NA	-1	True	NA	NA	NA	126795159	126791196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794640_126795100
ENSMUST00000205335.2	chr6	-	3387	8	FSM	ENSMUSG00000053907.11	ENSMUST00000205335.2	3387	8	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_3	40.6724095420862	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416539	72409781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ENSMUST00000205406.2	chr17	-	714	4	FSM	ENSMUSG00000118642.2	ENSMUST00000205406.2	714	4	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1823	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGGCCTCACTAAACCAT	NA	False	NA	NA	False	NA	NA	NA	40159718	40158993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_40159024_40159025_40159488_40159492_40159526_40159529
ENSMUST00000205407.2	chr7	-	1412	11	FSM	ENSMUSG00000030491.17	ENSMUST00000205407.2	1412	11	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_10	140.166365437647	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTCTCTTAAAATATTT	NA	False	NA	-10	True	AATAAA	-36	NA	35237118	35193033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35236938
ENSMUST00000205434.2	chr7	+	2765	14	FSM	ENSMUSG00000030523.19	ENSMUST00000205434.2	2765	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_13	349.928648686554	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAATCTTAGATGAATTG	NA	False	NA	13	True	AATAAA	-18	NA	63835297	63874512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438
ENSMUST00000205548.2	chr7	-	2363	3	FSM	ENSMUSG00000090862.4	ENSMUST00000205548.2	2363	3	0	0	0	0	multi-exon	FALSE	canonical	3	9102	junction_2	1081.5	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGTGTTTTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	115933370	115930746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_115933010_115933134_115933184_115933319
ENSMUST00000205658.2	chr7	+	995	4	FSM	ENSMUSG00000063439.8	ENSMUST00000205658.2	995	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	1.69967317119759	398	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGCCTCCTTGTATC	NA	False	NA	8	True	AATAAA	-19	NA	25380204	25385983	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_25380404_25380807_25380900_25382715_25382842_25385405
ENSMUST00000205701.2	chr7	+	3437	5	FSM	ENSMUSG00000078779.5	ENSMUST00000205701.2	3437	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_4	40.2639727299729	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATACACAAGCCTA	408	False	NA	NA	False	AAGAAA	-4	NA	27538031	27555863	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_27538135_27542259_27542313_27543709_27543837_27545828_27545928_27552808
ENSMUST00000205711.2	chr7	-	1373	1	FSM	ENSMUSG00000052997.16	ENSMUST00000205711.2	1373	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	628	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCTGCATACTTGTCA	NA	False	NA	-26	True	AATAAA	-1	NA	33841511	33840138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_33840100_33841500
ENSMUST00000205731.2	chr7	+	2575	11	FSM	ENSMUSG00000030523.19	ENSMUST00000205731.2	2575	11	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	225.867682504603	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGGCTCTTTGACTCAT	NA	False	NA	NA	False	NA	NA	NA	63835302	63868483	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237
ENSMUST00000205748.2	chr7	+	1492	5	FSM	ENSMUSG00000074887.5	ENSMUST00000205748.2	1492	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	99.780697031039	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCAGCTCAAAGTCTTC	9998	False	NA	NA	False	NA	NA	NA	42863462	42876266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_42863572_42870265_42870330_42872998_42873126_42873324_42873386_42875135
ENSMUST00000205796.2	chr7	+	3448	22	FSM	ENSMUSG00000033790.12	ENSMUST00000205796.2	3448	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	22.4463078187455	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTCTACCTATTTCATG	NA	False	NA	15	True	AATAAA	-18	NA	55443938	55481194	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ENSMUST00000205823.2	chr6	-	590	3	FSM	ENSMUSG00000053907.11	ENSMUST00000205823.2	590	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	295.5	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGTGTCTATTACTTG	NA	False	NA	-12	True	AATAAA	-16	NA	72411974	72409782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72410306_72411322_72411379_72411963
ENSMUST00000205871.2	chr7	-	986	4	FSM	ENSMUSG00000003380.12	ENSMUST00000205871.2	986	4	0	0	0	0	multi-exon	FALSE	canonical	3	706	junction_2	27.3292679903595	1952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCCAATACTTTCCT	-3	True	NA	-14	True	AATAAA	-15	NA	24672063	24669185	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_24669435_24669511_24669614_24671185_24671284_24671526
ENSMUST00000205906.2	chr7	-	1150	5	FSM	ENSMUSG00000090862.4	ENSMUST00000205906.2	1150	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	4265.5784118335	6108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGTGTTTTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	115933401	115930746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_115930819_115931613_115931715_115932163_115933010_115933134_115933184_115933319
ENSMUST00000205960.2	chr7	+	1992	10	FSM	ENSMUSG00000030523.19	ENSMUST00000205960.2	1992	10	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_5	65.6911967719673	2530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTGAGTTTTCAGAC	NA	False	NA	26	True	ATTAAA	-23	NA	63835128	63861175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ENSMUST00000205961.2	chr7	-	2021	10	FSM	ENSMUSG00000001247.17	ENSMUST00000205961.2	2021	10	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_7	47.1029867208513	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTAAGCCTCTTGTTT	NA	False	NA	-7	True	AATAAA	-13	NA	30672747	30657203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30662235_30662293_30665393_30665514_30671292_30671638_30672504
ENSMUST00000205983.2	chr7	-	617	8	FSM	ENSMUSG00000036427.6	ENSMUST00000205983.2	617	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	693.075841772731	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTTGTTCAGGGCATC	NA	False	NA	NA	False	NA	NA	NA	33929682	33902113	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_33902129_33902239_33902316_33903453_33903583_33904992_33905029_33926627_33926663_33928352_33928422_33928707_33928799_33929516
ENSMUST00000205995.2	chr7	-	1337	2	FSM	ENSMUSG00000074166.8	ENSMUST00000205995.2	1337	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGATGGTGCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	41148832	41139270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_41140493_41148717
ENSMUST00000206019.2	chr7	+	2299	2	FSM	ENSMUSG00000055652.15	ENSMUST00000206019.2	2299	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGGCTGAAGGAGAAGCA	NA	False	NA	NA	False	AATAAA	-18	NA	75498088	75517239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_75498233_75515084
ENSMUST00000206026.2	chr7	-	2906	7	FSM	ENSMUSG00000042502.11	ENSMUST00000206026.2	2906	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	225.562999329825	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGAGTCTGCGCCCAG	5520	False	NA	28	True	NA	NA	NA	126795110	126791167	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794640_126795086
ENSMUST00000206084.2	chr7	-	772	7	FSM	ENSMUSG00000030538.16	ENSMUST00000206084.2	772	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	282.60317683203	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2299	False	NA	-12	True	AATAAA	-15	NA	79882313	79876906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878282_79880063_79880173_79882091_79882127_79882257
ENSMUST00000206106.2	chr7	+	1159	5	FSM	ENSMUSG00000030762.12	ENSMUST00000206106.2	1159	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.3895116933639	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGGTGTCTGTTGACT	5836	False	NA	1	True	AATAAA	-15	NA	123062973	123067221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_123063065_123063411_123063539_123064331_123064547_123065808_123065944_123066630
ENSMUST00000206124.2	chr7	-	1709	7	FSM	ENSMUSG00000030800.11	ENSMUST00000206124.2	1709	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	11.3932241071417	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTACACATATTTACAG	NA	False	NA	NA	False	AATAAA	-14	NA	127529276	127524887	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_127525813_127525916_127526084_127526170_127526443_127526980_127527144_127528728_127528747_127528969_127529086_127529228
ENSMUST00000206135.2	chr19	+	744	8	FSM	ENSMUSG00000108414.2	ENSMUST00000206135.2	744	8	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_1	116.047316176794	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701521	8703807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8701554_8701766_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUST00000206144.2	chr7	+	755	5	FSM	ENSMUSG00000063903.6	ENSMUST00000206144.2	755	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	31.0241841149771	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAACTATGGCTGAAAAT	NA	False	NA	-68	True	TTTAAA	-18	NA	43874866	43878967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43874908_43876944_43877105_43877951_43878239_43878334_43878472_43878837
ENSMUST00000206155.2	chr19	+	605	10	FSM	ENSMUSG00000108414.2	ENSMUST00000206155.2	605	10	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	203.637719952995	19820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700838	8703807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUST00000206194.2	chr7	+	532	3	FSM	ENSMUSG00000033429.11	ENSMUST00000206194.2	532	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	103	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTATTTGTTATTTGA	NA	False	NA	21	True	ATTAAA	-22	NA	64042522	64061869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_64042592_64049916_64050093_64061582
ENSMUST00000206196.2	chr7	+	551	5	FSM	ENSMUSG00000004610.5	ENSMUST00000206196.2	551	5	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_1	127.987059892788	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGTGGTGACTGCTGACC	1955	False	NA	NA	False	NA	NA	NA	43093553	43105997	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43105902
ENSMUST00000206270.2	chr7	-	674	1	FSM	ENSMUSG00000108518.2	ENSMUST00000206270.2	674	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCACTGGAACCAAACCT	2274	False	NA	NA	False	NA	NA	NA	25119251	25118577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_25118600_25119300
ENSMUST00000206319.2	chr6	-	2410	1	FSM	ENSMUSG00000055850.13	ENSMUST00000206319.2	2410	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8717	False	NA	NA	False	TATAAA	-15	NA	72339106	72336696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72336700_72339100
ENSMUST00000206358.2	chr7	-	3009	1	FSM	ENSMUSG00000097415.3	ENSMUST00000206358.2	3009	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTAGTGGTCTTGCCC	NA	False	NA	0	True	NA	NA	NA	75421794	75418785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_75418800_75421800
ENSMUST00000206405.2	chr7	+	1428	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCAGCTCAAAGTCTTC	9998	False	NA	NA	False	NA	NA	NA	42863462	42876266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
ENSMUST00000206462.2	chr19	+	855	5	FSM	ENSMUSG00000108414.2	ENSMUST00000206462.2	855	5	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_1	85.4469864886995	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8702026	8703807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8702086_8702377_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUST00000206478.2	chr7	-	952	1	FSM	ENSMUSG00000108503.2	ENSMUST00000206478.2	952	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGCATCCTGCGGCACA	NA	False	NA	NA	False	NA	NA	NA	25122217	25121265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_25121300_25122200
ENSMUST00000206517.2	chr7	+	905	6	FSM	ENSMUSG00000078681.11	ENSMUST00000206517.2	905	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	235.550079600921	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACGACAACCCAGAACTTT	NA	False	NA	17	True	AATAAA	-17	NA	65343224	65351650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_65343318_65343598_65343692_65344917_65345076_65347443_65347619_65348839_65348916_65351340
ENSMUST00000206519.2	chr19	+	2728	2	FSM	ENSMUSG00000108414.2	ENSMUST00000206519.2	2728	2	0	0	0	0	multi-exon	FALSE	canonical	3	1003	junction_1	0	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGATGGCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	8700850	8703806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8702621_8702848
ENSMUST00000206570.2	chr7	-	1400	8	FSM	ENSMUSG00000030697.8	ENSMUST00000206570.2	1400	8	0	0	0	0	multi-exon	FALSE	canonical	3	2424	junction_1	142.291307979548	4145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAGGTTCTGTCAGGTT	5226	False	NA	NA	False	AATAAA	-13	NA	126391512	126385039	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232
ENSMUST00000206574.2	chr7	+	1286	11	FSM	ENSMUSG00000030763.8	ENSMUST00000206574.2	1286	11	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_5	37.2322440903043	2159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTGCTACATCTGTACA	6898	False	NA	22	True	AATAAA	-22	NA	122977278	123029572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003712_123009950_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
ENSMUST00000206575.2	chr7	+	1157	6	FSM	ENSMUSG00000075701.11	ENSMUST00000206575.2	1157	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	154.225808475754	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACAGTCTCTGGTTTTTC	NA	False	NA	5	True	AGTAAA	-14	NA	65729425	65739151	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737017_65738514
ENSMUST00000206598.2	chr19	+	1393	8	Antisense	novelGene_ENSMUSG00000010095.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3941	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACGCGGGTTGGATCATG	NA	False	NA	NA	False	NA	NA	NA	8684950	8690349	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr19_+_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093
ENSMUST00000206623.2	chr7	-	710	1	FSM	ENSMUSG00000108405.2	ENSMUST00000206623.2	710	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	792	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCTGAATCTGCCCAAC	NA	False	NA	NA	False	NA	NA	NA	97241609	97240899	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_97240900_97241600
ENSMUST00000206685.2	chr7	-	3940	6	FSM	ENSMUSG00000063047.10	ENSMUST00000206685.2	3940	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	22.29798197147	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAGTAAAAACTATAA	NA	False	NA	NA	False	TTTAAA	-28	NA	27678572	27660785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676164_27676259_27678514
ENSMUST00000206692.2	chr6	-	1400	9	FSM	ENSMUSG00000053907.11	ENSMUST00000206692.2	1400	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	259.956697115116	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATACTTTCGCCATGA	NA	False	NA	NA	False	AATAAA	-25	NA	72416539	72411527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_72411723_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ENSMUST00000206745.2	chr7	+	1702	9	FSM	ENSMUSG00000030802.15	ENSMUST00000206745.2	1702	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	198.361255037369	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGGCCCCAAATGTTG	NA	False	NA	28	True	ATTAAA	-20	NA	127503933	127507780	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127507092
ENSMUST00000206772.2	chr7	+	653	7	FSM	ENSMUSG00000030672.13	ENSMUST00000206772.2	653	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	719.114598346853	3384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	251	False	NA	32	True	AATAAA	-24	NA	126808070	126813460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_126808124_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ENSMUST00000206786.2	chr19	+	729	2	FSM	ENSMUSG00000108414.2	ENSMUST00000206786.2	729	2	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	6	True	NA	26	True	AATAAA	-15	NA	8702838	8703807	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8703191_8703430
ENSMUST00000206882.2	chr7	+	391	2	FSM	ENSMUSG00000033429.11	ENSMUST00000206882.2	391	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTATTTGTTATTTGA	NA	False	NA	21	True	ATTAAA	-22	NA	64042487	64061869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_64042592_64061582
ENSMUST00000206947.2	chr6	+	618	4	FSM	ENSMUSG00000034192.6	ENSMUST00000206947.2	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	1484	junction_1	387.955610290089	6978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTTTTTTTTTTAATG	NA	False	NA	42	True	ATTAAA	-18	NA	91493029	91499602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222
ENSMUST00000206963.2	chr7	-	653	5	FSM	ENSMUSG00000090862.4	ENSMUST00000206963.2	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	4507.63410782197	111061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGTGTTTTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	115933365	115930746	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_115930819_115931613_115931715_115932163_115932334_115932930_115933010_115933134
ENSMUST00000207002.2	chr7	+	3690	3	FSM	ENSMUSG00000057101.9	ENSMUST00000207002.2	3690	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAACAGATGTCC	NA	False	NA	NA	False	AATAAA	-15	NA	23781348	23807123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_23781664_23784850_23784932_23803829
ENSMUST00000207010.2	chr7	-	3168	20	FSM	ENSMUSG00000030766.16	ENSMUST00000207010.2	3168	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	76.6055479211471	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGCATGTGTGAGCTT	NA	False	NA	52	True	NA	NA	NA	122969074	122878440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_122879340_122884642_122884691_122885720_122886237_122891258_122891429_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ENSMUST00000207082.2	chr7	-	1241	9	FSM	ENSMUSG00000001794.14	ENSMUST00000207082.2	1241	9	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_7	82.1492544092763	1524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGTTATTTTTTTAAT	NA	False	NA	-2	True	NA	NA	NA	29892397	29886360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291
ENSMUST00000207103.2	chr7	+	2414	2	FSM	ENSMUSG00000109511.2	ENSMUST00000207103.2	2414	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGACTTGCTGTGAGT	370	False	NA	13	True	AATAAA	-13	NA	44465806	44480228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44465903_44477910
ENSMUST00000207159.2	chr7	-	466	4	FSM	ENSMUSG00000030615.13	ENSMUST00000207159.2	466	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	346.691345275432	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATCTTGTCTGCAAC	1772	False	NA	NA	False	AATAAA	-7	NA	90106310	90099919	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_90100144_90100750_90100866_90104631_90104728_90106279
ENSMUST00000207233.2	chr7	-	2917	4	FSM	ENSMUSG00000048787.14	ENSMUST00000207233.2	2917	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	49.3716067751046	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATACTCTTGATACAA	NA	False	NA	-7	True	AATAAA	-16	NA	119495348	119455028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_119457280_119458602_119459139_119494780_119494899_119495336
ENSMUST00000207263.2	chr7	-	835	7	FSM	ENSMUSG00000006315.10	ENSMUST00000207263.2	835	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	291.92945304569	1969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCAGTGAAGTAAACAGT	9288	False	NA	-45	True	NA	NA	NA	30428934	30427158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428167_30428626_30428697_30428768
ENSMUST00000207282.2	chr7	+	3464	15	FSM	ENSMUSG00000030852.19	ENSMUST00000207282.2	3464	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	76.8787808096324	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130294494	130366514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_130294718_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUST00000207309.2	chr7	-	835	4	FSM	ENSMUSG00000062797.15	ENSMUST00000207309.2	835	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	457.818741425032	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	14	True	AATAAA	-33	NA	89590334	89567895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_89568216_89569280_89569400_89584934_89585173_89590176
ENSMUST00000207389.2	chr8	+	363	4	FSM	ENSMUSG00000087687.4	ENSMUST00000207389.2	363	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	322.072800603977	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTAGTGCCAAGTGTT	5638	False	NA	10	True	NA	NA	NA	3671601	3673372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_3671696_3672341_3672429_3672592_3672626_3673223
ENSMUST00000207393.2	chr7	-	1051	9	FSM	ENSMUSG00000038502.18	ENSMUST00000207393.2	1051	9	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_5	33.7006583763582	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCGAAGCCTGGAGCAGGA	7774	False	NA	NA	False	NA	NA	NA	44516878	44512994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44513157_44513806_44513912_44514035_44514094_44514185_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798
ENSMUST00000207416.2	chr7	-	657	7	FSM	ENSMUSG00000038502.18	ENSMUST00000207416.2	657	7	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	156.981598355419	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTCCCTCCCTGCTTG	NA	False	NA	-8	True	AATAAA	-15	NA	44514364	44512490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336
ENSMUST00000207525.2	chr7	-	897	1	FSM	ENSMUSG00000002985.17	ENSMUST00000207525.2	897	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGAGCAAGGTCGCCAGC	NA	False	NA	NA	False	NA	NA	NA	19431556	19430659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_19430700_19431600
ENSMUST00000207549.2	chr7	+	3492	16	FSM	ENSMUSG00000030852.19	ENSMUST00000207549.2	3492	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	100.624626983436	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAGAAT	NA	False	NA	-47	True	NA	NA	NA	130247959	130366438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_130248161_130276331_130276470_130318432_130318570_130330252_130331559_130335247_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUST00000207555.2	chr7	+	1641	7	FSM	ENSMUSG00000003184.16	ENSMUST00000207555.2	1641	7	0	0	0	0	multi-exon	TRUE	canonical	3	134	junction_1	17.7458915433028	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCGTCTAGGCTGGTGG	NA	False	NA	16	True	AATAAA	-31	NA	44647112	44651825	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44650447_44651096_44651213_44651587
ENSMUST00000207563.2	chr7	-	3640	31	FSM	ENSMUSG00000003435.10	ENSMUST00000207563.2	3640	31	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_28	195.98717645125	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACGAAGAGTTTTCTT	NA	False	NA	-8	True	AATAAA	-21	NA	28038171	28014315	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28029455_28030004_28030071_28030794_28030955_28037351_28037449_28037776_28037861_28038119
ENSMUST00000207594.2	chr7	+	2245	9	FSM	ENSMUSG00000061119.8	ENSMUST00000207594.2	2245	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	35.423994339995	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTGAAAAAGTAGAATG	NA	False	NA	102	True	AATAAA	-24	NA	92524507	92583222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92566930_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ENSMUST00000207659.2	chr7	-	945	8	FSM	ENSMUSG00000109324.3	ENSMUST00000207659.2	945	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1257.72160379516	1551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635780	44626181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44626408_44626927_44627050_44627550_44627699_44628896_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ENSMUST00000207683.2	chr7	-	647	7	FSM	ENSMUSG00000053565.11	ENSMUST00000207683.2	647	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	1263.25735259641	1529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTCTCTTGCCTGT	NA	False	NA	-5	True	AATAAA	-16	NA	28681212	28670797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28681098
ENSMUST00000207711.2	chr7	+	1320	7	FSM	ENSMUSG00000070837.7	ENSMUST00000207711.2	1320	7	0	0	0	0	multi-exon	FALSE	canonical	2	56	junction_6	160.229696234985	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2914	False	NA	20	True	ATTAAA	-21	NA	6998501	7006090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_6998834_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ENSMUST00000207736.2	chr7	+	2128	9	FSM	ENSMUSG00000066979.7	ENSMUST00000207736.2	2128	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	579.695609781547	2960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGTGTGTTACCTTGG	NA	False	NA	11	True	ATTAAA	-20	NA	131162108	131173624	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131164026_131164092_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ENSMUST00000207747.2	chr7	-	669	3	FSM	ENSMUSG00000036835.8	ENSMUST00000207747.2	669	3	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_1	38	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTTCTTGGGATCTTTC	1444	False	NA	-3	True	AATAAA	-19	NA	30262512	30261287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30261560_30261748_30261854_30262220
ENSMUST00000207776.2	chr7	+	1735	1	FSM	ENSMUSG00000045752.14	ENSMUST00000207776.2	1735	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142623089	142624824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_142623100_142624800
ENSMUST00000207779.2	chr7	-	774	7	FSM	ENSMUSG00000006315.10	ENSMUST00000207779.2	774	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	293.234831946457	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	9290	False	NA	-12	True	AGTAAA	-18	NA	30428932	30427125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427923_30427994_30428081_30428142_30428626_30428697_30428768
ENSMUST00000207849.2	chr7	-	2128	6	FSM	ENSMUSG00000070436.13	ENSMUST00000207849.2	2128	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	741.154936568596	2241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATATCATTCTTTCTAAG	NA	False	NA	84	True	ATTAAA	-11	NA	99002321	98994601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99001030_99001075_99002259
ENSMUST00000207895.2	chr7	+	1338	6	FSM	ENSMUSG00000039745.9	ENSMUST00000207895.2	1338	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	54.5688555863141	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAATGGAGAAA	9918	False	NA	-5	True	NA	NA	NA	49408900	49423723	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_49409060_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ENSMUST00000207941.2	chr8	+	4263	31	FSM	ENSMUSG00000004565.16	ENSMUST00000207941.2	4263	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	54.0174868805361	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGCAGCCTGGTGCTGTC	NA	False	NA	10	True	AATAAA	-14	NA	3566873	3594260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ENSMUST00000207957.2	chr7	-	880	2	FSM	ENSMUSG00000046792.9	ENSMUST00000207957.2	880	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCCACCTGTACACTG	9671	False	NA	-77	True	NA	NA	NA	6158925	6145351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_6146150_6158843
ENSMUST00000207992.2	chr7	+	687	4	FSM	ENSMUSG00000061119.8	ENSMUST00000207992.2	687	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	46.0506967012082	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTAATGTCTTCTATCT	NA	False	NA	NA	False	AATAAA	-24	NA	92524502	92555794	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92555556
ENSMUST00000208046.2	chr7	+	334	2	FSM	ENSMUSG00000109118.2	ENSMUST00000208046.2	334	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTATACCTGAGTCTGG	NA	False	NA	NA	False	AATAAA	-15	NA	46658292	46658756	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_46658342_46658471
ENSMUST00000208054.2	chr7	-	383	5	FSM	ENSMUSG00000061787.16	ENSMUST00000208054.2	383	5	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	5279.89450652189	2011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGTCTGTATTGTTCT	NA	False	NA	-12	True	AATAAA	-10	NA	80994975	80992482	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_80992598_80993482_80993549_80994058_80994165_80994686_80994757_80994949
ENSMUST00000208119.2	chr7	-	2173	6	FSM	ENSMUSG00000070436.13	ENSMUST00000208119.2	2173	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	754.843400977978	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTCTTTCTAAGACAAA	NA	False	NA	89	True	ATTAAA	-16	NA	99002321	98994596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002088_99002173_99002259
ENSMUST00000208128.2	chr7	-	1596	8	FSM	ENSMUSG00000003190.13	ENSMUST00000208128.2	1596	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	69.0081332089167	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	44648136	44640645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44640879_44642167_44642456_44643234_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886_44647068_44648048
ENSMUST00000208190.2	chr7	-	2259	15	FSM	ENSMUSG00000059119.10	ENSMUST00000208190.2	2259	15	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_1	167.71624785905	2703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGATTGGTTTTTTTGTT	NA	False	NA	-5	True	ATTAAA	-16	NA	143102843	143067319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ENSMUST00000208202.2	chr7	+	936	4	FSM	ENSMUSG00000030922.13	ENSMUST00000208202.2	936	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	24.5356882927706	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTATAGGCTTTTTTG	NA	False	NA	-74	True	NA	NA	NA	119495092	119515893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_119495114_119508893_119509186_119513395_119513489_119515363
ENSMUST00000208214.2	chr9	+	2398	24	FSM	ENSMUSG00000032604.17	ENSMUST00000208214.2	2398	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	114.995898669366	2488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTCTCTGTTGTCTGCCT	NA	False	NA	18	True	AATAAA	-21	NA	108385257	108393140	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_108385399_108385581_108385681_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ENSMUST00000208217.2	chr7	-	1178	9	FSM	ENSMUSG00000048065.9	ENSMUST00000208217.2	1178	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	13.026415470113	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAATGTGTGGATAT	NA	False	NA	-5	True	AATAAA	-19	NA	107357203	107349171	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_107349604_107350373_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107357164
ENSMUST00000208227.2	chr7	+	2720	32	FSM	ENSMUSG00000037337.12	ENSMUST00000208227.2	2720	32	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	36.7447250350036	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTCGGAGGAGAGATT	NA	False	NA	20	True	AATAAA	-25	NA	28681474	28702701	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28681690_28682413_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28702521
ENSMUST00000208357.2	chr7	-	806	4	FSM	ENSMUSG00000062797.15	ENSMUST00000208357.2	806	4	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_3	356.664485974642	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATTTGAAATACCATTAC	NA	False	NA	-2	True	AATAAA	-17	NA	89590407	89567911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89590176
ENSMUST00000208381.2	chr8	-	1937	3	FSM	ENSMUSG00000022322.9	ENSMUST00000208381.2	1937	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	149	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATAGGCACTGATATACT	NA	False	NA	NA	False	TATAAA	-21	NA	4829567	4813467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_4815090_4818143_4818312_4829420
ENSMUST00000208434.2	chr9	+	1137	9	FSM	ENSMUSG00000109032.2	ENSMUST00000208434.2	1137	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	15.4833580014156	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCACTGGTGTCTCGTA	NA	False	NA	NA	False	AAGAAA	-20	NA	75379409	75391984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_75379554_75380085_75380262_75380603_75380689_75383697_75383793_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390480_75391931
ENSMUST00000208441.2	chr7	+	485	4	FSM	ENSMUSG00000074218.4	ENSMUST00000208441.2	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	502.814964861716	3230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGTCTACGCAGTGGA	5724	False	NA	72	True	NA	NA	NA	29883618	29885503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_29883765_29884509_29884597_29884699_29884785_29885336
ENSMUST00000208477.2	chr7	-	1553	6	FSM	ENSMUSG00000035227.8	ENSMUST00000208477.2	1553	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_5	975.780180163545	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGAGTCTTGAAAGAAGG	NA	False	NA	-2	True	AATAAA	-19	NA	99508066	99488109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99498363_99498460_99507970
ENSMUST00000208532.2	chr7	-	489	6	FSM	ENSMUSG00000030744.14	ENSMUST00000208532.2	489	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5856.28204238833	7496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGACTGGATTGTGTCC	8437	False	NA	-34	True	AATAAA	-36	NA	99132843	99128088	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_99128159_99128480_99128535_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ENSMUST00000208626.2	chr7	+	2708	2	FSM	ENSMUSG00000109511.2	ENSMUST00000208626.2	2708	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCTGTGAGTATGGG	75	False	NA	18	True	AATAAA	-18	NA	44465511	44480233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44465897_44477910
ENSMUST00000208689.2	chr7	-	397	1	FSM	ENSMUSG00000109509.2	ENSMUST00000208689.2	397	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3396	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATTTTGGCTGATTTTT	9635	False	NA	-41	True	AAGAAA	-4	NA	30184522	30184125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30184100_30184500
ENSMUST00000208694.2	chr9	+	3988	9	FSM	ENSMUSG00000057551.11	ENSMUST00000208694.2	3988	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	38.1313519298752	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533423	19561027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ENSMUST00000208698.2	chr7	+	551	3	FSM	ENSMUSG00000043831.13	ENSMUST00000208698.2	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	14	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTGGTTTATCTAAA	NA	False	NA	NA	False	ATTAAA	-31	NA	66872361	66874375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_66872378_66873356_66873640_66874123
ENSMUST00000208722.2	chr7	+	3883	21	FSM	ENSMUSG00000030852.19	ENSMUST00000208722.2	3883	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	145.480677411126	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTCTTTGAGTCTTGG	NA	False	NA	8	True	AATAAA	-20	NA	130179213	130366493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_130179247_130203566_130203668_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130333260_130333297_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130346256_130346347_130352919_130353064_130353563_130353641_130355347_130355392_130360896_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUST00000208737.2	chr11	+	1843	14	FSM	ENSMUSG00000025156.18	ENSMUST00000208737.2	1843	14	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_6	299.627579489159	3178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1404	False	NA	1	True	ATTAAA	-18	NA	120675110	120679927	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUST00000208784.2	chr7	+	523	5	FSM	ENSMUSG00000037337.12	ENSMUST00000208784.2	523	5	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	9.82344135219425	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTCTCGGAGGAGAGA	6962	False	NA	18	True	AATAAA	-23	NA	28700966	28702699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ENSMUST00000208838.2	chr7	-	354	3	FSM	ENSMUSG00000036751.8	ENSMUST00000208838.2	354	3	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_2	2796.5	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATTGTGTGTATTACAC	NA	False	NA	-4	True	AATAAA	-18	NA	30325539	30316398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30316588_30322839_30322941_30325475
ENSMUST00000208951.2	chr7	+	1883	8	FSM	ENSMUSG00000066232.5	ENSMUST00000208951.2	1883	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	376.224422820383	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	7239	False	NA	21	True	ATTAAA	-16	NA	109617521	109655322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_109617716_109626277_109626356_109642035_109642093_109643615_109643693_109650680_109650735_109651917_109652125_109653206_109653324_109654223
ENSMUST00000209020.2	chr1	+	264	4	FSM	ENSMUSG00000097893.9	ENSMUST00000209020.2	264	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.942809041582063	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGGACTCCTGAGGAG	NA	False	NA	NA	False	NA	NA	NA	9818850	9840976	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_9818871_9820582_9820631_9822673_9822790_9840896
ENSMUST00000209032.2	chr7	-	1610	6	FSM	ENSMUSG00000035227.8	ENSMUST00000209032.2	1610	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	1023.35436677624	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGAGTCTTGAAAGAAG	NA	False	NA	-3	True	AATAAA	-18	NA	99508118	99488110	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99505619_99505722_99507970
ENSMUST00000209065.2	chr7	-	727	6	FSM	ENSMUSG00000006315.10	ENSMUST00000209065.2	727	6	0	0	0	0	multi-exon	FALSE	canonical	3	791	junction_1	3.48711915483254	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	-11	True	NA	-12	True	AGTAAA	-18	NA	30428746	30427125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626
ENSMUST00000209099.2	chr7	+	2088	12	FSM	ENSMUSG00000030435.17	ENSMUST00000209099.2	2088	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	525.567461915969	1183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGGATCCTCATCTGT	35	False	NA	28	True	ATTAAA	-18	NA	5065243	5082932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
ENSMUST00000209141.2	chr7	-	3755	29	FSM	ENSMUSG00000003435.10	ENSMUST00000209141.2	3755	29	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_13	69.0304945924152	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038131	28014322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28029455_28030004_28030071_28030794_28030955_28037776
ENSMUST00000209164.2	chr7	-	432	3	FSM	ENSMUSG00000097162.3	ENSMUST00000209164.2	432	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	1.5	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTCAAACCGCTATCTAA	NA	False	NA	-13	True	AATAAA	-17	NA	89779192	89774038	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_89774241_89776135_89776253_89779079
ENSMUST00000209180.2	chr9	+	2184	3	FSM	ENSMUSG00000109032.2	ENSMUST00000209180.2	2184	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTATGTGTGTGCATT	NA	False	NA	16	True	AATAAA	-21	NA	75390132	75393963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_75390186_75390380_75390480_75391931
ENSMUST00000209200.2	chr8	+	1519	8	FSM	ENSMUSG00000091490.4	ENSMUST00000209200.2	1519	8	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_1	49.9477277781891	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAGCCATTAGACTTAA	NA	False	NA	4	True	AATATA	-5	NA	43633577	43646901	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ENSMUST00000209210.2	chr8	-	936	3	FSM	ENSMUSG00000110231.2	ENSMUST00000209210.2	936	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACACAGAACTGACTCTT	NA	False	NA	NA	False	AGTAAA	-17	NA	45618256	45613530	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_45614092_45614492_45614559_45617947
ENSMUST00000209222.2	chr7	+	460	2	FSM	ENSMUSG00000030796.18	ENSMUST00000209222.2	460	2	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	0	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAAGCCTGGTTATTGAGC	NA	False	NA	NA	False	GGGGCT	-21	NA	44881571	44882510	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44881760_44882238
ENSMUST00000209287.2	chr7	+	1027	6	FSM	ENSMUSG00000059070.17	ENSMUST00000209287.2	1027	6	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	3241.25016621673	107652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTCCTCTGTGTTCAT	6008	False	NA	9	True	AATAAA	-16	NA	45367580	45370252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45368005_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
ENSMUST00000209292.2	chr7	+	2026	7	FSM	ENSMUSG00000002781.20	ENSMUST00000209292.2	2026	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	23.5401548187111	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTAGTGTGGCTGC	5632	False	NA	7	True	AATAAA	-14	NA	45546504	45566837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45546526_45546858_45547091_45549055_45549161_45556341_45556537_45558745_45559026_45565506_45565697_45565834
ENSMUST00000209294.2	chr7	-	1612	10	FSM	ENSMUSG00000025494.9	ENSMUST00000209294.2	1612	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	39.3474550920669	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGGGCTTATTTCTGTC	NA	False	NA	-32	True	AATAAA	-15	NA	140680455	140671089	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140680391
ENSMUST00000209356.2	chr8	-	1744	4	FSM	ENSMUSG00000051176.7	ENSMUST00000209356.2	1744	4	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_3	1933.09774426667	5057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43759987	43748099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_43749574_43753664_43753743_43757512_43757595_43759877
ENSMUST00000209396.2	chr8	+	2421	11	FSM	ENSMUSG00000038482.12	ENSMUST00000209396.2	2421	11	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	290.39449030586	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2120	False	NA	88	True	AATAAA	-18	NA	13388767	13428442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_13388807_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUST00000209449.2	chr16	+	580	3	FSM	ENSMUSG00000097290.10	ENSMUST00000209449.2	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	32	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTCTGGAAAGATGGG	NA	False	NA	16	True	AATAAA	-21	NA	21613091	21627776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_21613197_21614599_21614726_21627427
ENSMUST00000209465.2	chr8	-	997	6	FSM	ENSMUSG00000038515.11	ENSMUST00000209465.2	997	6	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_2	24.7111310951158	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAAATTAGTGTTCTCC	NA	False	NA	-32	True	TTTAAA	-7	NA	13242255	13226932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049
ENSMUST00000209469.2	chr19	+	2354	4	FSM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	0	0	0	0	multi-exon	FALSE	canonical	3	6173	junction_3	71.2850303749361	40250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	5540482	5545229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408
ENSMUST00000209484.2	chr7	-	1783	6	FSM	ENSMUSG00000053801.19	ENSMUST00000209484.2	1783	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	183.663387750526	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACAAGTCCTCTGAGCTT	8628	False	NA	-7	True	AATAAA	-28	NA	45480219	45474653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45480018
ENSMUST00000209487.2	chr7	-	888	5	FSM	ENSMUSG00000033916.6	ENSMUST00000209487.2	888	5	0	0	0	0	multi-exon	FALSE	canonical	3	2610	junction_4	222.956273739942	3084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAAGGCTGTGAGCTT	7072	False	NA	-11	True	AATAAA	-17	NA	12768597	12765940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_12766130_12766215_12766278_12766361_12766749_12767755_12767970_12768561
ENSMUST00000209500.2	chr7	+	1560	5	FSM	ENSMUSG00000038618.13	ENSMUST00000209500.2	1560	5	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	22.576259654779	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTCAGTGTGTCCTGAG	NA	False	NA	17	True	AATAAA	-14	NA	140795806	140798568	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140798082_140798182
ENSMUST00000209565.2	chr8	+	1971	2	FSM	ENSMUSG00000045969.9	ENSMUST00000209565.2	1971	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGTTTATTTCCTTAT	NA	False	NA	15	True	NA	NA	NA	11608428	11613250	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_11608567_11611417
ENSMUST00000209614.2	chr10	+	1647	2	FSM	ENSMUSG00000061371.8	ENSMUST00000209614.2	1647	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	81896092	81900579	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_81897183_81900022
ENSMUST00000209622.2	chr10	+	2284	3	FSM	ENSMUSG00000061371.8	ENSMUST00000209622.2	2284	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	19	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTATCTATATTATCAAA	NA	False	NA	NA	False	AATAAA	-16	NA	81883976	81897420	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_81884064_81894203_81894331_81895350
ENSMUST00000209626.2	chr7	-	734	8	FSM	ENSMUSG00000074129.15	ENSMUST00000209626.2	734	8	0	0	0	0	multi-exon	FALSE	canonical	3	1166	junction_7	5527.98350879137	3793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGAAAATCTGCAAGTT	NA	False	NA	-52	True	NA	NA	NA	44778159	44775426	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44777965
ENSMUST00000209691.2	chr8	-	1030	7	FSM	ENSMUSG00000038515.11	ENSMUST00000209691.2	1030	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	138.954029168723	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTCCATTTTTTCCTA	3701	False	NA	-21	True	TTTAAA	-18	NA	13250556	13226921	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13250048_13250201_13250480
ENSMUST00000209693.2	chr7	+	535	5	FSM	ENSMUSG00000059070.17	ENSMUST00000209693.2	535	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3268.24428210316	4059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCTGTGTTCATTCA	5963	False	NA	12	True	AATAAA	-19	NA	45367535	45370255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369717_45369912_45370137
ENSMUST00000209733.2	chr8	+	921	2	FSM	ENSMUSG00000031697.13	ENSMUST00000209733.2	921	2	0	0	0	0	multi-exon	FALSE	canonical	3	1103	junction_1	0	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTCTTCATCCATCAAA	NA	False	NA	NA	False	NA	NA	NA	86026455	86028492	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_86026622_86027737
ENSMUST00000209765.2	chr2	+	1898	1	FSM	ENSMUSG00000109946.2	ENSMUST00000209765.2	1898	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTTCTCATTTTTCTT	NA	False	NA	3	True	AATAAA	-15	NA	27332335	27334233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_27332300_27334200
ENSMUST00000209812.2	chr7	-	690	8	FSM	ENSMUSG00000074129.15	ENSMUST00000209812.2	690	8	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	5944.08936744421	29011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTCCTTAGGCACTGC	NA	False	NA	45	True	NA	NA	NA	44778147	44775295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776512_44776632_44776699_44776919_44776993_44778123
ENSMUST00000209838.2	chr7	-	449	4	FSM	ENSMUSG00000003429.12	ENSMUST00000209838.2	449	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12140.870543563	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACGTACAGAACAGGCTTG	NA	False	NA	-15	True	AATAAA	-10	NA	44772952	44771816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44771983_44772252_44772383_44772619_44772663_44772842
ENSMUST00000209867.2	chr7	+	254	3	FSM	ENSMUSG00000059070.17	ENSMUST00000209867.2	254	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4045.5	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGTCCTCTGTGTTCA	7447	False	NA	8	True	AATAAA	-15	NA	45369019	45370251	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45369061_45369343_45369443_45370137
ENSMUST00000209872.2	chr8	+	1395	7	FSM	ENSMUSG00000091490.4	ENSMUST00000209872.2	1395	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	183.817542386163	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43633577	43646918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43643105_43643129_43643305_43643407_43646239
ENSMUST00000209885.2	chr8	+	2511	12	FSM	ENSMUSG00000038482.12	ENSMUST00000209885.2	2511	12	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_1	150.974903502547	1650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2103	False	NA	94	True	AATAAA	-24	NA	13388750	13428448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUST00000209927.2	chr7	-	552	7	FSM	ENSMUSG00000074129.15	ENSMUST00000209927.2	552	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	6353.08417883262	1997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCATGCCTGCCTGGCCT	NA	False	NA	-11	True	AATAAA	-9	NA	44778126	44775351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776919_44776993_44778123
ENSMUST00000209967.2	chr7	-	470	4	FSM	ENSMUSG00000074129.15	ENSMUST00000209967.2	470	4	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	7940.61084971847	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGGACTCCTGGTGTGAA	NA	False	NA	-14	True	AAGAAA	-30	NA	44776335	44775388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44775457_44775538_44775678_44775901_44775962_44776132
ENSMUST00000209984.2	chr7	+	1815	8	FSM	ENSMUSG00000063229.16	ENSMUST00000209984.2	1815	8	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	2898.88755580904	9236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGCTCTTTTATTA	NA	False	NA	18	True	AATAAA	-14	NA	46496505	46505050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_46496813_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ENSMUST00000210005.2	chr8	+	1914	10	FSM	ENSMUSG00000019139.11	ENSMUST00000210005.2	1914	10	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_3	42.074302294634	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTGTGTGCTTTTTC	NA	False	NA	20	True	AATAAA	-16	NA	71047130	71049940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ENSMUST00000210041.2	chr8	+	1881	2	FSM	ENSMUSG00000045969.9	ENSMUST00000210041.2	1881	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCATGTTTATTTCCTTA	NA	False	NA	14	True	NA	NA	NA	11608195	11613249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_11608245_11611417
ENSMUST00000210052.2	chr5	-	3523	4	FSM	ENSMUSG00000109771.2	ENSMUST00000210052.2	3523	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	10.7082522694727	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAAAGTGTTCCTTTTTC	NA	False	NA	-3	True	AATAAA	-14	NA	110242286	110224001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_110227247_110228349_110228411_110228603_110228731_110242196
ENSMUST00000210060.2	chr7	-	2577	6	FSM	ENSMUSG00000057342.16	ENSMUST00000210060.2	2577	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	47.003829631212	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGACATCCCTTTCAGTT	3262	False	NA	-6	True	AATAAA	-35	NA	45367326	45359690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45367124
ENSMUST00000210073.2	chr7	-	992	6	FSM	ENSMUSG00000074129.15	ENSMUST00000210073.2	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	15796	junction_2	955.88798506938	4323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44777247	44775345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776699_44776919
ENSMUST00000210106.2	chr7	-	943	4	FSM	ENSMUSG00000050708.17	ENSMUST00000210106.2	943	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	31741.9424561398	38393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTTTTTTCTATAT	NA	False	NA	-20	True	AATAAA	-16	NA	45109263	45107368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45107708_45107958_45108106_45108507_45108655_45108953
ENSMUST00000210136.2	chr8	+	1552	9	FSM	ENSMUSG00000091490.4	ENSMUST00000210136.2	1552	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	178.11092049619	2401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43633577	43646918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_43633650_43635378_43635395_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ENSMUST00000210139.2	chr7	+	1077	10	FSM	ENSMUSG00000003423.16	ENSMUST00000210139.2	1077	10	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	50.5151242478703	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	21	True	AATAAA	-21	NA	44803726	44809489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44803845_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ENSMUST00000210146.2	chr8	+	1041	6	FSM	ENSMUSG00000031697.13	ENSMUST00000210146.2	1041	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	398.413353189875	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGTATGAGTA	NA	False	NA	8	True	AATAAA	-16	NA	86026551	86034699	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_86026622_86027737_86027868_86029424_86029589_86029990_86030081_86032845_86032948_86034214
ENSMUST00000210163.2	chr7	+	1241	4	FSM	ENSMUSG00000094152.6	ENSMUST00000210163.2	1241	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	2.05480466765633	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCGTGAGGCTCGATTT	NA	False	NA	NA	False	AATAAA	-19	NA	44917573	44922789	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_44917623_44917871_44918357_44921914_44922078_44922245
ENSMUST00000210167.2	chr7	-	1897	9	FSM	ENSMUSG00000025494.9	ENSMUST00000210167.2	1897	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	41.6921380478382	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140680437	140671087	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140680391
ENSMUST00000210191.2	chr7	-	562	7	FSM	ENSMUSG00000074129.15	ENSMUST00000210191.2	562	7	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	7369.60067703053	3668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCAATAAAGACTGTTT	NA	False	NA	3	True	NA	NA	NA	44778160	44775371	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44775457_44775538_44775678_44775901_44775962_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ENSMUST00000210230.2	chr8	-	620	4	FSM	ENSMUSG00000031487.6	ENSMUST00000210230.2	620	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	38.1255236758206	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCATCCCTTGCCCATCAT	NA	False	NA	NA	False	NA	NA	NA	27618641	27614527	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618524
ENSMUST00000210231.2	chr8	-	1685	8	FSM	ENSMUSG00000037022.4	ENSMUST00000210231.2	1685	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	28.5742855714429	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTAGAGTTTCCCTGA	NA	False	NA	-6	True	AATAAA	-17	NA	80021309	79994536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007809_80008284_80010837_80011076_80021174
ENSMUST00000210277.2	chr1	+	1226	10	FSM	ENSMUSG00000026617.17	ENSMUST00000210277.2	1226	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_7	59.2152382790481	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAATACGCTTAAGACTT	NA	False	NA	3	True	ATTAAA	-17	NA	185064368	185088978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
ENSMUST00000210279.2	chr8	-	2199	13	FSM	ENSMUSG00000037103.9	ENSMUST00000210279.2	2199	13	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_7	21.0218140669797	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTCCTGTTCTGT	9262	False	NA	-3	True	ACTAAA	-17	NA	84831392	84823700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
ENSMUST00000210314.2	chr7	-	1658	10	FSM	ENSMUSG00000038650.16	ENSMUST00000210314.2	1658	10	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_9	176.376561249007	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGTCCTTGTCGTTCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	140748602	140740238	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748486
ENSMUST00000210325.2	chr10	+	2360	4	FSM	ENSMUSG00000061371.8	ENSMUST00000210325.2	2360	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	1.24721912892465	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTTTTATCTATATTA	NA	False	NA	NA	False	AATAAA	-11	NA	81883956	81897415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350
ENSMUST00000210350.2	chr7	+	529	4	FSM	ENSMUSG00000089847.9	ENSMUST00000210350.2	529	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	163.903087897154	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTCTTGTCTTCAGAG	NA	False	NA	NA	False	AATAAA	-17	NA	105289757	105291056	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_105289830_105289968_105290065_105290234_105290368_105290828
ENSMUST00000210381.2	chr10	+	3330	4	FSM	ENSMUSG00000073427.5	ENSMUST00000210381.2	3330	4	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	14.0554457615387	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGATGTTTATGTTGTC	NA	False	NA	3	True	AATAAA	-15	NA	82190149	82215470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_82190216_82204404_82204532_82204731_82204793_82212394
ENSMUST00000210428.2	chr14	-	1180	6	FSM	ENSMUSG00000054733.10	ENSMUST00000210428.2	1180	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	27.7748087302145	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACCGCCTGCTGTGAGT	NA	False	NA	-5	True	AATAAA	-19	NA	64654397	64360074	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64654346
ENSMUST00000210496.2	chr7	-	3088	23	FSM	ENSMUSG00000054662.9	ENSMUST00000210496.2	3088	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	49.4689359076452	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGATGTAGATCCAG	NA	False	NA	-14	True	AATAAA	-22	NA	140697686	140681130	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682974_140683148_140683904_140684058_140684150_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ENSMUST00000210501.2	chr8	+	2682	13	FSM	ENSMUSG00000038482.12	ENSMUST00000210501.2	2682	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	432.048311020371	1558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2143	False	NA	94	True	AATAAA	-24	NA	13388790	13428448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_13388912_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420168_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUST00000210530.2	chr8	-	2398	7	FSM	ENSMUSG00000031508.15	ENSMUST00000210530.2	2398	7	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	160.305350988529	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685754	11661582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11685410
ENSMUST00000210558.2	chr7	+	2815	9	FSM	ENSMUSG00000074071.12	ENSMUST00000210558.2	2815	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	20.4328167417025	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACTTTCAAGGTGCCCA	NA	False	NA	58	True	AATAAA	-29	NA	67925742	68012840	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
ENSMUST00000210564.3	chr18	+	2524	1	FSM	ENSMUSG00000109901.3	ENSMUST00000210564.3	2524	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	664	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTATTTCCTCGCTTTT	NA	False	NA	85	True	CATAAA	-20	NA	67338436	67340960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_67338400_67341000
ENSMUST00000210587.2	chr7	-	930	6	FSM	ENSMUSG00000033916.6	ENSMUST00000210587.2	930	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	1091.38616447159	3832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGCTGTGAGCTTATGA	7091	False	NA	-7	True	AATAAA	-21	NA	12768578	12765936	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768428
ENSMUST00000210630.2	chr8	+	3494	11	FSM	ENSMUSG00000031684.12	ENSMUST00000210630.2	3494	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	38.9035988052519	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCTGGAAATGTCGTG	NA	False	NA	31	True	ATTAAA	-16	NA	79236020	79460631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ENSMUST00000210642.2	chr7	-	1602	7	FSM	ENSMUSG00000003420.9	ENSMUST00000210642.2	1602	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	28.0475786239502	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTGTGTGCATCGTT	871	False	NA	-7	True	CATAAA	-10	NA	44753169	44742487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751825_44752096_44752426_44752698_44753063
ENSMUST00000210752.2	chr8	+	298	2	FSM	ENSMUSG00000096917.3	ENSMUST00000210752.2	298	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTCCTGCTTCTTTCAA	NA	False	NA	9	True	NA	NA	NA	57958848	57959765	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_57958943_57959561
ENSMUST00000210789.3	chr2	-	3773	26	FSM	ENSMUSG00000061136.17	ENSMUST00000210789.3	3773	26	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_25	95.4321874421833	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTAGTCTTTATTTCTAC	NA	False	NA	-3	True	ATTAAA	-16	NA	53081296	53028249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081160
ENSMUST00000210792.2	chr7	-	464	4	FSM	ENSMUSG00000074129.15	ENSMUST00000210792.2	464	4	0	0	0	0	multi-exon	FALSE	canonical	3	15796	junction_2	745.970955645504	3254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44776303	44775346	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132
ENSMUST00000210797.2	chr7	+	646	3	FSM	ENSMUSG00000040428.20	ENSMUST00000210797.2	646	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	3	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTGTGACATTGTGTT	NA	False	NA	8	True	AATAAA	-17	NA	45199258	45203653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45199390_45202668_45202719_45203188
ENSMUST00000210803.2	chr7	+	590	5	FSM	ENSMUSG00000037772.14	ENSMUST00000210803.2	590	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	637.011136087902	6104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGACACTTTGCCTT	NA	False	NA	2	True	AATAAA	-20	NA	142086897	142094484	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_142086979_142088741_142088865_142089806_142089890_142091003_142091078_142094255
ENSMUST00000210808.2	chr7	-	579	4	FSM	ENSMUSG00000063511.12	ENSMUST00000210808.2	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	1192	junction_3	155.137215250099	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTGTGATTGGGCAGT	9226	False	NA	NA	False	NA	NA	NA	45044981	45041247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45041558_45041686_45041750_45044082_45044240_45044932
ENSMUST00000210815.2	chr7	+	1535	8	FSM	ENSMUSG00000063229.16	ENSMUST00000210815.2	1535	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2882.58672099932	1914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495264	46505051	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_46495342_46497019_46497170_46498447_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ENSMUST00000210878.2	chr8	+	1916	10	FSM	ENSMUSG00000019139.11	ENSMUST00000210878.2	1916	10	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	45.5894183087303	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047139	71049938	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ENSMUST00000210882.2	chr7	+	1757	5	FSM	ENSMUSG00000025470.12	ENSMUST00000210882.2	1757	5	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	31.3318926973779	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCTGTTCTTCTTCATG	NA	False	NA	19	True	AATAAA	-16	NA	139616440	139620515	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238
ENSMUST00000210917.2	chr19	+	410	2	FSM	ENSMUSG00000110156.3	ENSMUST00000210917.2	410	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGCTCACACTACACAG	9355	False	NA	0	True	NA	NA	NA	5962980	5964854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5963101_5964564
ENSMUST00000210967.2	chr7	-	658	8	FSM	ENSMUSG00000074129.15	ENSMUST00000210967.2	658	8	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	5939.18297480076	115970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778144	44775345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44775457_44775538_44775678_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ENSMUST00000210997.2	chr7	+	1315	9	FSM	ENSMUSG00000030825.20	ENSMUST00000210997.2	1315	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	257.274385384554	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTGGAGTGGTCGTGT	NA	False	NA	7	True	NA	NA	NA	45205467	45216742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45205518_45205736_45205820_45207031_45207099_45208449_45208531_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ENSMUST00000211061.2	chr7	+	552	5	FSM	ENSMUSG00000059070.17	ENSMUST00000211061.2	552	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3596.15853203109	7052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGATGGTCCTCTGTG	5950	False	NA	4	True	AATAAA	-11	NA	45367522	45370247	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45367564_45368952_45369061_45369343_45369443_45369717_45369912_45370137
ENSMUST00000211115.2	chr8	+	2601	7	FSM	ENSMUSG00000031628.10	ENSMUST00000211115.2	2601	7	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	22.2816566310098	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	False	NA	21	True	CATAAA	-17	NA	47070325	47092724	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
ENSMUST00000211173.2	chr7	+	1684	12	FSM	ENSMUSG00000030826.20	ENSMUST00000211173.2	1684	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	162.811811458546	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTATCATGCTCTAA	1796	False	NA	NA	False	AATAAA	-17	NA	45222292	45239134	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45222375_45224536_45224615_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
ENSMUST00000211174.2	chr8	-	2447	7	FSM	ENSMUSG00000031508.15	ENSMUST00000211174.2	2447	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	195.638626610959	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	NA	False	NA	-3	True	AATAAA	-14	NA	11685754	11661583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11673696_11673859_11678438_11678531_11682865_11683019_11685410
ENSMUST00000211217.2	chr8	+	997	6	FSM	ENSMUSG00000031629.15	ENSMUST00000211217.2	997	6	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_2	30.0865418418269	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTTTTATTTTTGAG	NA	False	NA	21	True	NA	NA	NA	47005072	47016034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452
ENSMUST00000211248.2	chr8	-	1837	5	FSM	ENSMUSG00000051176.7	ENSMUST00000211248.2	1837	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	1844.21519555067	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43759973	43748099	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_43749574_43753664_43753743_43755911_43756017_43757512_43757597_43759877
ENSMUST00000211325.2	chr7	+	502	3	FSM	ENSMUSG00000059070.17	ENSMUST00000211325.2	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	8095	junction_2	104.5	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCCCCTCACCACTGC	7003	False	NA	NA	False	NA	NA	NA	45368575	45369549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45368764_45368952_45369061_45369343
ENSMUST00000211344.2	chr7	-	606	5	FSM	ENSMUSG00000033916.6	ENSMUST00000211344.2	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	1201.14705594278	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAAGGCTGTGAGCTT	7098	False	NA	-11	True	AATAAA	-17	NA	12768571	12765940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12767755_12767970_12768561
ENSMUST00000211352.2	chr7	-	1453	7	FSM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	48.2482008875864	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTGTCTGTCTGTC	6660	False	NA	-4	True	AATAAA	-25	NA	44741645	44732336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741528
ENSMUST00000211365.2	chr7	-	801	6	FSM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	1143.13684220219	7137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCCCTTGTCCGCCCA	9977	False	NA	-2	True	AATAAA	-22	NA	45116260	45111120	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45111387_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
ENSMUST00000211372.2	chr7	+	688	4	FSM	ENSMUSG00000025481.13	ENSMUST00000211372.2	688	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	116.448367194316	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAATCTGAACCTATCATT	NA	False	NA	27	True	AATAAA	-17	NA	140415184	140417879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140415316_140415524_140415665_140416659_140416796_140417598
ENSMUST00000211389.2	chr8	-	1359	3	FSM	ENSMUSG00000031508.15	ENSMUST00000211389.2	1359	3	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_2	21.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACTGACAATACCAG	NA	False	NA	NA	False	NA	NA	NA	11685754	11677668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_11678531_11682865_11683019_11685410
ENSMUST00000211425.2	chr7	+	834	4	FSM	ENSMUSG00000059070.17	ENSMUST00000211425.2	834	4	0	0	0	0	multi-exon	FALSE	canonical	3	7563	junction_3	587.15263962808	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACCCTGGATCTTAACTG	7113	False	NA	-34	True	NA	NA	NA	45368685	45370209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45368764_45368952_45369443_45369717_45369912_45370137
ENSMUST00000211435.2	chr7	+	402	4	FSM	ENSMUSG00000059070.17	ENSMUST00000211435.2	402	4	0	0	0	0	multi-exon	FALSE	canonical	3	8095	junction_2	387.345094485812	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTTTGACCAGCTGGCC	7060	False	NA	NA	False	NA	NA	NA	45368632	45369781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45368764_45368952_45369061_45369343_45369443_45369717
ENSMUST00000211438.2	chr7	-	503	4	FSM	ENSMUSG00000074129.15	ENSMUST00000211438.2	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	11064	junction_3	2438.98353144638	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGCCCTGGAGCGCCTC	NA	False	NA	NA	False	NA	NA	NA	44778159	44776188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44776517_44776632_44776699_44776919_44776993_44778123
ENSMUST00000211443.2	chr16	+	767	4	FSM	ENSMUSG00000097290.10	ENSMUST00000211443.2	767	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	60.8896999134957	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGTTGAAAGGTCCATG	NA	False	NA	30	True	AATAAA	-35	NA	21613067	21627790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_21613197_21614599_21614726_21625720_21625870_21627427
ENSMUST00000211500.2	chr7	-	825	3	FSM	ENSMUSG00000050708.17	ENSMUST00000211500.2	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	56898	junction_1	6244.5	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGCTTTTTGAGACAGC	NA	False	NA	-40	True	AGTAAA	-2	NA	45108887	45107388	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45107708_45107958_45108085_45108507
ENSMUST00000211513.2	chr7	+	1156	3	FSM	ENSMUSG00000059824.13	ENSMUST00000211513.2	1156	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	20	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATCAACACAATCCTGA	NA	False	NA	NA	False	NA	NA	NA	45354692	45359538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45355187_45357683_45357896_45359088
ENSMUST00000211515.2	chr7	-	3112	13	FSM	ENSMUSG00000054662.9	ENSMUST00000211515.2	3112	13	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_9	11.5926221748528	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCCTCATGATGTA	NA	False	NA	-21	True	AATAAA	-15	NA	140688587	140681137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163
ENSMUST00000211535.2	chr7	-	595	2	FSM	ENSMUSG00000003420.9	ENSMUST00000211535.2	595	2	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTCGTCTCTGTGTCCGT	821	False	NA	NA	False	AATACA	-13	NA	44753219	44752258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44752698_44753063
ENSMUST00000211583.2	chr7	-	514	3	FSM	ENSMUSG00000003429.12	ENSMUST00000211583.2	514	3	0	0	0	0	multi-exon	FALSE	canonical	3	18027	junction_1	6373.5	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATCTCCATTACATCCG	NA	False	NA	NA	False	NA	NA	NA	44773775	44772335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44772663_44772842_44772975_44773720
ENSMUST00000211615.2	chr7	-	548	3	FSM	ENSMUSG00000003873.12	ENSMUST00000211615.2	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	3184	junction_2	25.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTGCTCTGGCCT	8909	False	NA	NA	False	NA	NA	NA	45115468	45112583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45112928_45114612_45114749_45115400
ENSMUST00000211626.2	chr7	-	726	6	FSM	ENSMUSG00000033916.6	ENSMUST00000211626.2	726	6	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	1108.87882115225	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATTTACCAAGGCTGTG	7003	False	NA	-16	True	AATAAA	-12	NA	12768666	12765945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766718_12766749_12767755_12767970_12768561
ENSMUST00000211638.2	chr7	-	3060	18	FSM	ENSMUSG00000025474.10	ENSMUST00000211638.2	3060	18	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_17	64.0289186395126	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCCTGCGCAATGAGCT	NA	False	NA	NA	False	NA	NA	NA	139616582	139575960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ENSMUST00000211660.2	chr7	-	494	3	FSM	ENSMUSG00000040026.9	ENSMUST00000211660.2	494	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	3.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCGCTGTCACTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	46363173	46361422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_46361689_46362012_46362152_46363084
ENSMUST00000211694.2	chr7	-	604	2	FSM	ENSMUSG00000050708.17	ENSMUST00000211694.2	604	2	0	0	0	0	multi-exon	FALSE	canonical	3	56898	junction_1	0	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTTTTTTCTATAT	NA	False	NA	-20	True	AATAAA	-16	NA	45108223	45107368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_45107708_45107958
ENSMUST00000211716.2	chr7	+	1350	5	FSM	ENSMUSG00000002778.15	ENSMUST00000211716.2	1350	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	97.5256376549264	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGCTGTTCCCTGCCC	3997	False	NA	14	True	AATAAA	-18	NA	45522248	45533153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45530984_45532400
ENSMUST00000211719.2	chr8	-	1622	2	FSM	ENSMUSG00000037070.11	ENSMUST00000211719.2	1622	2	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	0	4349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCAATTTTCTGTCTTG	NA	False	NA	NA	False	AGTAAA	-10	NA	79235508	79231905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_79233447_79235427
ENSMUST00000211725.2	chr7	-	493	5	FSM	ENSMUSG00000003429.12	ENSMUST00000211725.2	493	5	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_1	12273.9079045755	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCTGGCCAATGCCCTA	NA	False	NA	-55	True	NA	NA	NA	44773759	44771856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44771973_44772252_44772383_44772586_44772663_44772842_44772975_44773720
ENSMUST00000211759.2	chr7	+	915	6	FSM	ENSMUSG00000025503.6	ENSMUST00000211759.2	915	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1496.17504323525	1173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCATTTCACCGTC	2942	False	NA	18	True	ATTAAA	-17	NA	140979340	140982881	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_140979379_140980200_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982656
ENSMUST00000211769.2	chr7	+	817	7	FSM	ENSMUSG00000031068.9	ENSMUST00000211769.2	817	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	1690.52946998533	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGATGGGAACCCGGC	NA	False	NA	NA	False	NA	NA	NA	137039393	137061271	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_137039501_137046707_137046817_137054181_137054271_137054425_137054501_137055141_137055344_137060851_137061025_137061209
ENSMUST00000211789.2	chr7	+	878	5	FSM	ENSMUSG00000025470.12	ENSMUST00000211789.2	878	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	137.414291469265	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCATCTGTTCTTCTTC	NA	False	NA	16	True	AATAAA	-13	NA	139616317	139620512	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_139616520_139616732_139616807_139617428_139617554_139619238_139619359_139620155
ENSMUST00000211798.2	chr7	+	2631	16	FSM	ENSMUSG00000061079.15	ENSMUST00000211798.2	2631	16	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_4	56.3191698171137	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCAGCTTGTGCCTGT	NA	False	NA	NA	False	ATTAAA	-27	NA	109660916	109694225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671328_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ENSMUST00000211807.2	chr8	+	1085	1	FSM	ENSMUSG00000031765.9	ENSMUST00000211807.2	1085	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3562	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGTTTTCTTGGTGT	NA	False	NA	27	True	AATAAA	-16	NA	94905868	94906953	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_94905900_94907000
ENSMUST00000211809.2	chr8	+	525	3	FSM	ENSMUSG00000054400.17	ENSMUST00000211809.2	525	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	140	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATATTTTCTGCAGATCT	4834	False	NA	6	True	ATTAAA	-18	NA	104977534	104990075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_104977728_104983916_104984076_104989902
ENSMUST00000211818.2	chr8	-	887	3	FSM	ENSMUSG00000031843.3	ENSMUST00000211818.2	887	3	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_1	49.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTCAGCTTGTGCCAGA	NA	False	NA	NA	False	NA	NA	NA	118528666	118520712	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_118521411_118525782_118525896_118528590
ENSMUST00000211866.2	chr8	-	2920	8	FSM	ENSMUSG00000031951.9	ENSMUST00000211866.2	2920	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	117.289281309948	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTACTGAGAACTC	NA	False	NA	-15	True	ATTAAA	-17	NA	112660431	112638704	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112653477_112653558_112659991_112660162_112660259
ENSMUST00000211887.2	chr8	-	8364	49	FSM	ENSMUSG00000036550.17	ENSMUST00000211887.2	8364	49	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_46	316.132422148272	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGATGGTTGTGAGCCAC	NA	False	NA	NA	False	NA	NA	NA	96534092	96446085	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501351_96501906_96502015_96515257_96515533_96533960
ENSMUST00000211898.2	chr8	+	1078	4	FSM	ENSMUSG00000071078.7	ENSMUST00000211898.2	1078	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	271.261661295674	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACACCCCATTTGTGGTA	447	False	NA	18	True	NA	NA	NA	70583982	70586398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70584250_70584567_70584659_70585236_70585305_70585746
ENSMUST00000211995.2	chr8	-	2312	9	FSM	ENSMUSG00000035824.8	ENSMUST00000211995.2	2312	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	19.1012924955355	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGTAAATTCATTTTCA	NA	False	NA	-7	True	AATAAA	-17	NA	104975183	104953329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104975032
ENSMUST00000212019.2	chr8	-	795	4	FSM	ENSMUSG00000045128.10	ENSMUST00000212019.2	795	4	0	0	0	0	multi-exon	FALSE	canonical	3	16397	junction_3	7846.8208565989	3393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350042	71348022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71348152_71348243_71348690_71348776_71348957_71350002
ENSMUST00000212033.2	chr8	+	2351	19	FSM	ENSMUSG00000014791.11	ENSMUST00000212033.2	2351	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.33425920782464	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTGTTAAATCAGCTC	NA	False	NA	6	True	AATAAA	-17	NA	106032244	106036609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106032462_106032598_106032640_106032746_106032820_106033227_106033398_106033485_106033586_106033670_106033823_106033919_106033999_106034094_106034146_106034226_106034350_106034433_106034566_106034665_106034768_106034863_106034973_106035080_106035218_106035303_106035468_106035553_106035667_106035745_106035851_106035956_106036040_106036124_106036212_106036296
ENSMUST00000212066.2	chr9	-	2810	6	FSM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	303.486671865504	2305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTAGGGCTTGACATG	-1	True	NA	NA	False	AATAAA	-44	NA	4309469	4294793	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309287
ENSMUST00000212072.2	chr8	+	1930	4	FSM	ENSMUSG00000055835.11	ENSMUST00000212072.2	1930	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	33.7671766990109	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGAGTGTTTTTGGCTT	NA	False	NA	10	True	AATAGA	-17	NA	112370032	112397640	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_112370245_112385017_112385074_112392692_112392837_112396122
ENSMUST00000212075.2	chr9	+	2800	3	FSM	ENSMUSG00000041124.12	ENSMUST00000212075.2	2800	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	13	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGTCTGAAAGTTTA	-5	True	NA	14	True	AATAAA	-1	NA	4376561	4386870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_4376624_4383536_4384143_4384738
ENSMUST00000212095.2	chr8	+	1257	6	FSM	ENSMUSG00000031622.17	ENSMUST00000212095.2	1257	6	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_5	28.5587114555261	1551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTAGTTATGTGCAGC	NA	False	NA	21	True	AATAAA	-18	NA	73449917	73466531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996
ENSMUST00000212121.2	chr8	-	2686	22	FSM	ENSMUSG00000006276.11	ENSMUST00000212121.2	2686	22	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	89.8414577371977	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAACATGAGACTATCTT	NA	False	NA	NA	False	TATAAA	-37	NA	73175295	73094844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ENSMUST00000212124.2	chr8	+	528	8	FSM	ENSMUSG00000031783.11	ENSMUST00000212124.2	528	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	713.417415096706	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAGACTCAGTTAAGCC	NA	False	NA	NA	False	GGGGCT	-19	NA	95584259	95590169	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589437_95589513_95590079
ENSMUST00000212129.2	chr8	-	578	5	FSM	ENSMUSG00000045128.10	ENSMUST00000212129.2	578	5	0	0	0	0	multi-exon	FALSE	canonical	1	58	junction_3	13957.9624766654	70918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350044	71348022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348789_71348957_71350002
ENSMUST00000212158.2	chr8	+	1862	1	FSM	ENSMUSG00000110631.2	ENSMUST00000212158.2	1862	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAGTTAGAGAGAGAG	2115	False	NA	NA	False	NA	NA	NA	122559985	122561847	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_122560000_122561800
ENSMUST00000212180.2	chr8	+	1134	4	FSM	ENSMUSG00000110605.2	ENSMUST00000212180.2	1134	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	15.5777619273972	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGATCAGTGTGTTA	NA	False	NA	NA	False	NA	NA	NA	129990121	130009325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_129990206_130007503_130007631_130007817_130007879_130008463
ENSMUST00000212187.2	chr8	-	657	3	FSM	ENSMUSG00000031708.18	ENSMUST00000212187.2	657	3	0	0	0	0	multi-exon	FALSE	canonical	3	3555	junction_2	356	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAACTGACTGTGTGTT	NA	False	NA	-10	True	AATAAA	-8	NA	84299240	84298333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84298688_84298860_84298950_84299026
ENSMUST00000212205.2	chr8	+	2758	23	FSM	ENSMUSG00000031930.12	ENSMUST00000212205.2	2758	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	144.720334461373	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCTGTTGCAAAGCCAG	NA	False	NA	10	True	AATAAA	-21	NA	108163031	108283844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ENSMUST00000212263.2	chr8	+	1616	10	FSM	ENSMUSG00000031756.6	ENSMUST00000212263.2	1616	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	99.5453863853935	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATCCATGGCACACTGA	NA	False	NA	23	True	AATATA	-19	NA	117649065	117668179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_117649181_117652820_117653002_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ENSMUST00000212270.2	chr8	-	3315	12	FSM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_11	48.4964001390441	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTGTCTCCTTTATC	NA	False	NA	-4	True	AATAAA	-15	NA	96580167	96562551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ENSMUST00000212289.2	chr8	-	338	3	FSM	ENSMUSG00000110489.2	ENSMUST00000212289.2	338	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	187	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAATAGTACTGGTATG	NA	False	NA	-4	True	TTTAAA	-1	NA	96544306	96535179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_96535388_96539051_96539129_96544253
ENSMUST00000212291.2	chr8	+	633	2	FSM	ENSMUSG00000031765.9	ENSMUST00000212291.2	633	2	0	0	0	0	multi-exon	FALSE	canonical	3	14831	junction_1	0	4158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTTGGTGTGG	NA	False	NA	29	True	AATAAA	-18	NA	94905838	94906955	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_94905967_94906450
ENSMUST00000212320.2	chr8	-	1121	9	FSM	ENSMUSG00000036120.11	ENSMUST00000212320.2	1121	9	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_5	20.7590341779188	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCAGGGTGCCTCCCA	9603	False	NA	2	True	AATAAA	-18	NA	70591746	70585915	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588185_70588282_70588859_70588941_70590678_70590874_70591570
ENSMUST00000212332.2	chr8	-	426	4	FSM	ENSMUSG00000031897.10	ENSMUST00000212332.2	426	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	117.139043685509	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGAAGGCTGTGTCTT	NA	False	NA	-7	True	AATAAA	-20	NA	106663657	106662366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663613
ENSMUST00000212335.2	chr1	+	400	4	FSM	ENSMUSG00000046330.11	ENSMUST00000212335.2	400	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	7389.73726792021	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTTTTTTTTGCCTT	NA	False	NA	-2	True	AATAAA	-15	NA	72750916	72752776	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_72750960_72751300_72751384_72752340_72752499_72752660
ENSMUST00000212336.2	chr8	+	684	3	FSM	ENSMUSG00000031813.9	ENSMUST00000212336.2	684	3	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	9.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTGTGCGTGCG	NA	False	NA	70	True	NA	NA	NA	71999375	72000729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71999679_72000221_72000279_72000405
ENSMUST00000212352.2	chr8	+	1234	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212352.2	1234	3	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	6.5	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGATGTGGTCCTTCTGT	NA	False	NA	8	True	ATTAAA	-14	NA	106427818	106430122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106427950_106428805_106429029_106429242
ENSMUST00000212357.2	chr8	-	3281	6	FSM	ENSMUSG00000036672.6	ENSMUST00000212357.2	3281	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_4	15.6767343538123	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTAGCGATATTGTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	106578624	106571304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106571811_106571891_106573024_106573279_106573433_106573615_106573811_106575382_106576556_106578502
ENSMUST00000212398.2	chr8	+	518	4	FSM	ENSMUSG00000008450.9	ENSMUST00000212398.2	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	2641	junction_1	479.48606746066	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTACCTTCCCCGCTC	NA	False	NA	NA	False	NA	NA	NA	106587296	106603421	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141
ENSMUST00000212410.2	chr8	+	750	5	FSM	ENSMUSG00000054400.17	ENSMUST00000212410.2	750	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	127.002706664071	1241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGCAGATCTCCTT	4823	False	NA	10	True	ATTAAA	-22	NA	104977523	104990079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_104977728_104983916_104984076_104988105_104988202_104988799_104988914_104989902
ENSMUST00000212418.2	chr8	-	734	6	FSM	ENSMUSG00000031708.18	ENSMUST00000212418.2	734	6	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_3	1506.30759143012	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTACCCTGTGTGACC	NA	False	NA	NA	False	NA	NA	NA	84321106	84299291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84299383_84299469_84299576_84299656_84299953_84300499_84300552_84301106_84301158_84320968
ENSMUST00000212426.2	chr8	+	2604	17	FSM	ENSMUSG00000005410.7	ENSMUST00000212426.2	2604	17	0	0	0	0	multi-exon	FALSE	canonical	3	635	junction_1	269.284113147712	2259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTGCTGTGTGAATACA	NA	False	NA	32	True	AATAAA	-45	NA	75836203	75854321	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ENSMUST00000212432.2	chr1	+	665	3	FSM	ENSMUSG00000046330.11	ENSMUST00000212432.2	665	3	0	0	0	0	multi-exon	FALSE	canonical	2	15690	junction_1	1470.5	16149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAACGGGTTATTTACG	NA	False	NA	-23	True	NA	NA	NA	72750472	72752755	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_72750960_72751300_72751384_72752660
ENSMUST00000212443.2	chr8	+	508	4	FSM	ENSMUSG00000079038.4	ENSMUST00000212443.2	508	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.54247233265651	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCCTTGAGTATCCCCA	7153	False	NA	NA	False	NA	NA	NA	69723737	69766859	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_69723844_69743913_69743975_69759831_69759895_69766581
ENSMUST00000212467.2	chr8	+	612	1	FSM	ENSMUSG00000110482.2	ENSMUST00000212467.2	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGGGTGCTCAGGCTG	NA	False	NA	NA	False	NA	NA	NA	124886811	124887423	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124886800_124887400
ENSMUST00000212490.2	chr8	+	1115	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212490.2	1115	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAACATGGTGGTGTGTCT	3328	False	NA	1	True	NA	NA	NA	123899583	123905504	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_123899783_123904588
ENSMUST00000212494.2	chr8	-	473	4	FSM	ENSMUSG00000045128.10	ENSMUST00000212494.2	473	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8545.57961105558	1738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAACTTGAGACTGTC	NA	False	NA	-35	True	NA	NA	NA	71350056	71348042	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71348152_71348559_71348690_71348776_71348957_71350002
ENSMUST00000212571.2	chr8	+	2649	18	FSM	ENSMUSG00000001472.18	ENSMUST00000212571.2	2649	18	0	0	0	0	multi-exon	TRUE	canonical	3	129	junction_17	98.3685253625717	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAACATGGTGATAT	NA	False	NA	8	True	AAGAAA	-13	NA	124100491	124130545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
ENSMUST00000212590.2	chr8	-	3376	16	FSM	ENSMUSG00000006276.11	ENSMUST00000212590.2	3376	16	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	26.4222128772995	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTGTTCAGTGTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	73175299	73131261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ENSMUST00000212592.2	chr19	-	3901	14	FSM	ENSMUSG00000025195.10	ENSMUST00000212592.2	3901	14	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_13	13.2052526755398	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGAGTGTGTTTCCTTC	NA	False	NA	-6	True	AATAAA	-14	NA	43868207	43835260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857444_43858027_43858046_43858600_43858749_43862596_43862697_43863265_43863460_43868051
ENSMUST00000212681.2	chr8	+	3001	4	FSM	ENSMUSG00000059897.6	ENSMUST00000212681.2	3001	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	2.49443825784929	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGACCCTTGTCCTGTA	7200	False	NA	27	True	AATAAA	-18	NA	69661689	69683188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_69661812_69678994_69679122_69679323_69679382_69680494
ENSMUST00000212686.2	chr8	-	554	4	FSM	ENSMUSG00000031897.10	ENSMUST00000212686.2	554	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	46.7784375778224	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACAGAAGGCTGTGTCT	NA	False	NA	-8	True	AATAAA	-19	NA	106663670	106662367	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497
ENSMUST00000212707.2	chr8	+	642	1	FSM	ENSMUSG00000110679.2	ENSMUST00000212707.2	642	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1814	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGCTTCAATAGTTCTC	NA	False	NA	NA	False	AATATA	-45	NA	94949620	94950262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_94949600_94950300
ENSMUST00000212709.2	chr8	-	700	5	FSM	ENSMUSG00000045128.10	ENSMUST00000212709.2	700	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	13791.0578727667	40491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTGCTTGTTTGCTTC	NA	False	NA	-19	True	AATAAA	-11	NA	71349927	71348026	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71349772
ENSMUST00000212716.2	chr8	-	1568	6	FSM	ENSMUSG00000013155.11	ENSMUST00000212716.2	1568	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	9.8508882848198	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGTTCCATAGGAGC	NA	False	NA	-14	True	ATTAAA	-15	NA	106434777	106430282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180
ENSMUST00000212781.2	chr8	+	2604	10	FSM	ENSMUSG00000015016.9	ENSMUST00000212781.2	2604	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.0488915140773	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTTTGTGGTAGACTC	9549	False	NA	NA	False	NA	NA	NA	123502258	123541165	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_123502330_123504815_123504963_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298
ENSMUST00000212790.2	chr8	+	2171	10	FSM	ENSMUSG00000015016.9	ENSMUST00000212790.2	2171	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	7.64489662745314	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGACCTGTGAGCTGTG	9607	False	NA	13	True	AATAAA	-25	NA	123502316	123544619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_123502368_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298_123540411_123544130
ENSMUST00000212796.2	chr8	-	679	4	FSM	ENSMUSG00000045128.10	ENSMUST00000212796.2	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	16397	junction_3	7152.95244403782	34710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350040	71348022	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71348354_71348559_71348690_71348776_71348957_71350002
ENSMUST00000212806.2	chr8	+	388	3	FSM	ENSMUSG00000031762.8	ENSMUST00000212806.2	388	3	0	0	0	0	multi-exon	TRUE	canonical	3	461	junction_1	6516.5	2679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCTTGTCTCTGTGCAT	NA	False	NA	33	True	AATAAA	-19	NA	94899487	94900192	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_94899581_94899754_94899821_94899963
ENSMUST00000212811.2	chr8	+	2653	16	FSM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	0	0	0	0	multi-exon	FALSE	canonical	3	1402	junction_7	114.72564374774	1630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATAGTAGTGCTGTGTGA	NA	False	NA	27	True	AATAAA	-40	NA	75836251	75854316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ENSMUST00000212824.2	chr8	+	2928	23	FSM	ENSMUSG00000032939.15	ENSMUST00000212824.2	2928	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	328.081966678305	1361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGCAAGGAATCAAAGCC	NA	False	NA	NA	False	ATTAAA	-15	NA	94941228	95041694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_94941260_94947187_94947240_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ENSMUST00000212831.2	chr8	+	1309	4	FSM	ENSMUSG00000033998.10	ENSMUST00000212831.2	1309	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	57.0438427878066	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTGGTTTATTACAA	NA	False	NA	19	True	AATAAA	-16	NA	126722174	126757422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_126722554_126751750_126752147_126756230_126756432_126757089
ENSMUST00000212851.2	chr8	+	1507	3	FSM	ENSMUSG00000071078.7	ENSMUST00000212851.2	1507	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	269.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACCCCATTTGTGGTAC	461	False	NA	19	True	NA	NA	NA	70583996	70586399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_70584250_70584567_70584659_70585236
ENSMUST00000212920.2	chr8	+	2659	5	FSM	ENSMUSG00000031924.5	ENSMUST00000212920.2	2659	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	638.782190969661	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCGTTTTTTCTATTT	NA	False	NA	55	True	AGTAAA	-11	NA	107892546	107912622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_107892605_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ENSMUST00000212922.2	chr8	-	3313	7	FSM	ENSMUSG00000014837.16	ENSMUST00000212922.2	3313	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	9.72396809720988	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCTTCTGTCTAC	NA	False	NA	-2	True	NA	NA	NA	106015682	106007040	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015400
ENSMUST00000212938.2	chr8	-	646	3	FSM	ENSMUSG00000031897.10	ENSMUST00000212938.2	646	3	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	9	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAACACTTAAACAGAAGG	NA	False	NA	-16	True	AATAAA	-11	NA	106663659	106662375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_106662538_106662627_106662780_106663327
ENSMUST00000212950.2	chr8	-	2620	22	FSM	ENSMUSG00000006276.11	ENSMUST00000212950.2	2620	22	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	58.0603720511769	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTATCTAGTAGCCTC	NA	False	NA	NA	False	NA	NA	NA	73175282	73111911	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ENSMUST00000212972.2	chr8	+	310	1	FSM	ENSMUSG00000005699.17	ENSMUST00000212972.2	310	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCCTTCGGATTGGTC	NA	False	NA	NA	False	AATAAA	-14	NA	106427782	106428092	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_106427800_106428100
ENSMUST00000212973.2	chr8	-	3633	9	FSM	ENSMUSG00000031729.7	ENSMUST00000212973.2	3633	9	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_2	54.85990680816	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTAGTGTTGGTCAAA	NA	False	NA	-17	True	AATAAA	-16	NA	110419892	110397960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_110399274_110402007_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ENSMUST00000212981.2	chr8	-	1184	7	FSM	ENSMUSG00000031754.11	ENSMUST00000212981.2	1184	7	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_6	876.397677363929	7084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTTTTTTAAGTTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	94763634	94746075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763253
ENSMUST00000212990.2	chr8	-	648	7	FSM	ENSMUSG00000031708.18	ENSMUST00000212990.2	648	7	0	0	0	0	multi-exon	FALSE	canonical	3	3555	junction_3	216.890461344482	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTGTGTTCTTTAGG	NA	False	NA	-3	True	AATAAA	-15	NA	84299569	84298326	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469
ENSMUST00000212991.2	chr8	-	3646	18	FSM	ENSMUSG00000052488.8	ENSMUST00000212991.2	3646	18	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_13	64.9317448394025	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAGACACTTGATTTTT	NA	False	NA	-2	True	AATAAA	-31	NA	73229070	73214473	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ENSMUST00000213005.2	chr8	+	1580	13	FSM	ENSMUSG00000033862.8	ENSMUST00000213005.2	1580	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	49.2958754190788	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACAGTTTGGCAATCC	2149	False	NA	10	True	GATAAA	-11	NA	123951604	123958989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ENSMUST00000213006.2	chr8	-	7479	48	FSM	ENSMUSG00000036550.17	ENSMUST00000213006.2	7479	48	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_14	392.362129597668	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534024	96446783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96462313_96462457_96462881_96463022_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ENSMUST00000213053.2	chr8	-	576	5	FSM	ENSMUSG00000045128.10	ENSMUST00000213053.2	576	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	13769.0618144447	11390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAGAGACCCACTGAATA	NA	False	NA	-51	True	NA	NA	NA	71350039	71348058	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71349976
ENSMUST00000213062.2	chr8	-	560	3	FSM	ENSMUSG00000006589.9	ENSMUST00000213062.2	560	3	0	0	0	0	multi-exon	FALSE	canonical	3	1410	junction_2	2	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	False	NA	-5	True	AATAAA	-17	NA	123302228	123301373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_123301767_123301875_123301955_123302140
ENSMUST00000213065.2	chr8	+	842	3	FSM	ENSMUSG00000095026.3	ENSMUST00000213065.2	842	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	4.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAAAGTCTCACGATTCA	NA	False	NA	NA	False	CATAAA	-3	NA	71171191	71175283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_71171282_71174425_71174587_71174692
ENSMUST00000213066.2	chr18	-	1569	4	FSM	ENSMUSG00000044906.7	ENSMUST00000213066.2	1569	4	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	16.8193010820572	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70597221	70585282	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032
ENSMUST00000213081.2	chr1	+	1790	10	FSM	ENSMUSG00000025949.17	ENSMUST00000213081.2	1790	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	48.0912199065356	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATGATAAAAA	NA	False	NA	NA	False	NA	NA	NA	65225862	65248558	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_65225993_65229477_65229659_65231303_65231454_65231689_65231726_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65247642_65247730_65247941
ENSMUST00000213254.2	chr9	-	1961	14	FSM	ENSMUSG00000031996.18	ENSMUST00000213254.2	1961	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	388.472977744746	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTTGTCAAAGACGTT	8715	False	NA	NA	False	AAAAAG	-1	NA	31123111	31067485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUST00000213296.2	chr9	-	1868	15	FSM	ENSMUSG00000032198.10	ENSMUST00000213296.2	1868	15	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	50.5494807094989	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGATTGCCTCTGTTCTCT	6275	False	NA	-6	True	NA	NA	NA	21763912	21748644	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21748848_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ENSMUST00000213316.2	chr9	-	1454	3	FSM	ENSMUSG00000032180.12	ENSMUST00000213316.2	1454	3	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_2	0.5	1674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGGTGACTGGGCTTA	NA	False	NA	-3	True	AATAAA	-21	NA	21421483	21418848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21419688_21420226_21420648_21421289
ENSMUST00000213371.2	chr9	+	1766	5	FSM	ENSMUSG00000057982.9	ENSMUST00000213371.2	1766	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	49.3273504254992	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCCTGGCCGGCCATGC	749	False	NA	34	True	NA	NA	NA	22137018	22150989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_22137129_22146315_22146443_22147323_22147591_22148970_22149081_22149837
ENSMUST00000213388.2	chr9	+	2344	9	FSM	ENSMUSG00000032114.10	ENSMUST00000213388.2	2344	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	9.53939201416946	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGGCTCATCCTTTCA	NA	False	NA	NA	False	AATAAA	-21	NA	44308395	44314265	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44308744_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
ENSMUST00000213396.2	chr9	+	2518	6	FSM	ENSMUSG00000032392.12	ENSMUST00000213396.2	2518	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	11.7915223783869	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTGTGACTGTCTGCA	NA	False	NA	NA	False	AATAAA	-21	NA	65122426	65146506	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
ENSMUST00000213508.2	chr9	-	1780	4	FSM	ENSMUSG00000032026.8	ENSMUST00000213508.2	1780	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	526.615820330364	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGATTCAGTTAAAGT	NA	False	NA	-15	True	AATAAA	-10	NA	48391915	48384790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_48386200_48386419_48386498_48390609_48390694_48391706
ENSMUST00000213528.2	chr10	-	969	8	FSM	ENSMUSG00000000296.9	ENSMUST00000213528.2	969	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	226.139563192327	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTCTGAATTCTTGT	NA	False	NA	55	True	AATAGA	-19	NA	31321851	31208622	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_31208966_31214180_31214242_31217135_31217175_31219007_31219023_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ENSMUST00000213539.2	chr9	-	1441	7	FSM	ENSMUSG00000056167.9	ENSMUST00000213539.2	1441	7	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_4	26.6817665582072	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTGCAGTTTACTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	114469153	114454335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUST00000213603.2	chr9	+	3430	21	FSM	ENSMUSG00000032178.15	ENSMUST00000213603.2	3430	21	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	559.175831022765	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCCGCTGAATGTAGAT	NA	False	NA	76	True	NA	NA	NA	21284768	21316617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_21284879_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ENSMUST00000213605.2	chr9	+	519	4	FSM	ENSMUSG00000001774.9	ENSMUST00000213605.2	519	4	0	0	0	0	multi-exon	FALSE	canonical	3	795	junction_1	89.2785901919753	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCGTGTATTTTCCTTTG	8546	False	NA	NA	False	TATAAA	-16	NA	18203601	18213578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321
ENSMUST00000213620.2	chr10	-	1442	7	FSM	ENSMUSG00000075232.7	ENSMUST00000213620.2	1442	7	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	51.8183258016784	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATGAAGAAGAAAAAAC	NA	False	NA	NA	False	AAGAAA	-27	NA	40178182	40165319	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_40165466_40166113_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ENSMUST00000213648.2	chr9	-	736	3	FSM	ENSMUSG00000048503.8	ENSMUST00000213648.2	736	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTACAACCCAGGTAAA	NA	False	NA	NA	False	ATTAAA	-39	NA	43027828	43020129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_43020634_43024755_43024931_43027771
ENSMUST00000213683.2	chr9	+	1107	7	FSM	ENSMUSG00000035443.11	ENSMUST00000213683.2	1107	7	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_6	186.06510210736	1635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAAGTGTTTTCTTCTAA	NA	False	NA	36	True	AATAAA	-17	NA	26911015	26918632	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
ENSMUST00000213747.2	chr9	-	935	4	FSM	ENSMUSG00000032112.11	ENSMUST00000213747.2	935	4	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_3	13.0213499897497	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGCATTCAGTGAATATAA	1967	False	NA	53	True	NA	NA	NA	44318403	44314994	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100
ENSMUST00000213760.2	chr9	+	596	4	FSM	ENSMUSG00000032399.9	ENSMUST00000213760.2	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	19599	junction_2	572.368956375363	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAATCCGAGAAGGTTGT	NA	False	NA	NA	False	AAAAAG	-28	NA	64084416	64085552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_64084760_64085002_64085087_64085178_64085300_64085504
ENSMUST00000213763.2	chr9	+	1216	12	FSM	ENSMUSG00000031939.17	ENSMUST00000213763.2	1216	12	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_9	145.029663537447	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACCTTTTATAGTT	9118	False	NA	-1	True	NA	NA	NA	15217555	15228266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
ENSMUST00000213770.2	chr9	+	775	7	FSM	ENSMUSG00000035443.11	ENSMUST00000213770.2	775	7	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_6	112.305634567263	2298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGTTGGAAGTGTTTTC	NA	False	NA	30	True	AATAAA	-11	NA	26911005	26918626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
ENSMUST00000213797.2	chr10	+	2734	6	FSM	ENSMUSG00000019826.12	ENSMUST00000213797.2	2734	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	45.729640278489	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGATACTTGATCTTTAT	NA	False	NA	4	True	AATAAA	-16	NA	41326422	41341570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_41326527_41327084_41328065_41331023_41331192_41331668_41331769_41332527_41332612_41340272
ENSMUST00000213815.2	chr9	-	1419	5	FSM	ENSMUSG00000001348.16	ENSMUST00000213815.2	1419	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	92.7425873048623	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCCAGAATGGGTGTGT	9074	False	NA	-30	True	AATAAA	-10	NA	22042949	22038033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22042796
ENSMUST00000213874.2	chr9	+	4109	24	FSM	ENSMUSG00000032267.9	ENSMUST00000213874.2	4109	24	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_12	166.491369690667	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896713	48953810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935280_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ENSMUST00000213913.2	chr9	+	831	7	FSM	ENSMUSG00000004096.10	ENSMUST00000213913.2	831	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	320.421423891863	4391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATCAATTTGACTTTTT	NA	False	NA	13	True	ATTAAA	-13	NA	14411942	14421661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_14412040_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ENSMUST00000213977.2	chr9	+	2317	5	FSM	ENSMUSG00000003299.11	ENSMUST00000213977.2	2317	5	0	0	0	0	multi-exon	FALSE	canonical	3	966	junction_4	55.0244263941025	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914251	20920127	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122
ENSMUST00000214045.2	chr9	+	491	2	FSM	ENSMUSG00000031939.17	ENSMUST00000214045.2	491	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	NA	False	NA	-24	True	NA	NA	NA	15227501	15228243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_15227934_15228184
ENSMUST00000214072.2	chr9	-	1941	7	FSM	ENSMUSG00000032299.11	ENSMUST00000214072.2	1941	7	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_5	106.241470245851	3050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGTCTTGCTTGCTTTT	6331	False	NA	0	True	AATAAA	-19	NA	57065561	57062318	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350
ENSMUST00000214136.2	chr9	+	1570	8	FSM	ENSMUSG00000032279.12	ENSMUST00000214136.2	1570	8	0	0	0	0	multi-exon	FALSE	canonical	3	1827	junction_2	68.917874817697	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATCCATAATGAATGA	NA	False	NA	46	True	AATAAA	-13	NA	54502377	54511220	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUST00000214137.2	chr10	-	286	1	FSM	ENSMUSG00000111376.2	ENSMUST00000214137.2	286	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTAAGCCCAGCTCCG	NA	False	NA	NA	False	NA	NA	NA	41562052	41561766	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_41561800_41562100
ENSMUST00000214174.2	chr9	-	579	4	FSM	ENSMUSG00000032299.11	ENSMUST00000214174.2	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	505.386980441721	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	8385	False	NA	-6	True	AATAAA	-13	NA	57063507	57062324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_57062565_57062695_57062873_57063185_57063296_57063455
ENSMUST00000214275.2	chr9	-	1284	14	FSM	ENSMUSG00000023262.14	ENSMUST00000214275.2	1284	14	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	137.635441630778	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTAATACTGTGGACA	NA	False	NA	-16	True	AATAAA	-18	NA	106315387	106310188	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106314087_106314153_106314827_106314937_106315331
ENSMUST00000214285.2	chr9	-	1213	3	FSM	ENSMUSG00000032180.12	ENSMUST00000214285.2	1213	3	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	267.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGCCTGGTGACTGGG	NA	False	NA	-7	True	AATAAA	-17	NA	21421483	21418852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21419688_21420226_21420411_21421289
ENSMUST00000214295.2	chr9	-	1829	16	FSM	ENSMUSG00000032254.11	ENSMUST00000214295.2	1829	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	74.9241394122526	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATCTCGGGACAGAAAT	NA	False	NA	NA	False	AATAAA	-39	NA	61854042	61832878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ENSMUST00000214409.2	chr9	-	2384	13	FSM	ENSMUSG00000037949.9	ENSMUST00000214409.2	2384	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	10.7635573425642	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCTTCTCCAAGACTT	NA	False	NA	-15	True	ATTAAA	-19	NA	122123412	122004957	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_122005545_122030836_122030954_122080212_122080342_122082001_122082194_122086121_122086305_122087982_122088058_122088600_122088657_122090149_122090546_122092735_122092856_122100264_122100400_122101432_122101631_122104576_122104730_122123369
ENSMUST00000214454.2	chr9	-	4770	25	FSM	ENSMUSG00000032175.12	ENSMUST00000214454.2	4770	25	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_24	14.2647949512077	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTGTTGCTTGCAT	NA	False	NA	-4	True	NA	NA	NA	21042539	21015365	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ENSMUST00000214470.2	chr9	-	2706	15	FSM	ENSMUSG00000010660.4	ENSMUST00000214470.2	2706	15	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_4	6.31163486696415	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCTAGTCTCTTTACAA	8079	False	NA	NA	False	TATAAA	-25	NA	118917329	118900594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118917135
ENSMUST00000214494.2	chr9	-	1080	11	FSM	ENSMUSG00000043923.9	ENSMUST00000214494.2	1080	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	17.9677488851553	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTGAAGGTTCCCAGG	8950	False	NA	NA	False	NA	NA	NA	44329326	44321609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324341_44324433_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ENSMUST00000214571.2	chr9	+	2113	8	FSM	ENSMUSG00000032294.18	ENSMUST00000214571.2	2113	8	0	0	0	0	multi-exon	FALSE	canonical	3	15664	junction_5	1465.84232245004	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACTGAAAGAAAAAAAAGC	1872	False	NA	NA	False	NA	NA	NA	59563858	59580242	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203
ENSMUST00000214644.2	chr10	-	1103	5	FSM	ENSMUSG00000000296.9	ENSMUST00000214644.2	1103	5	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	42.7346463656832	1495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGGATCTTTTATTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31321850	31208372	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_31208966_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ENSMUST00000214828.2	chr8	-	3301	23	FSM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	114.790718661872	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTGGTCAGTTTGGTCGT	NA	False	NA	-9	True	ATTAAA	-15	NA	125448717	125398071	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ENSMUST00000214845.2	chr9	-	461	4	FSM	ENSMUSG00000110834.2	ENSMUST00000214845.2	461	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	43.70608907489	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATCCCTATGAGTACT	NA	False	NA	NA	False	NA	NA	NA	124044769	124032987	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_124033196_124033755_124033817_124033999_124034127_124044704
ENSMUST00000214864.2	chr9	-	1662	5	FSM	ENSMUSG00000032175.12	ENSMUST00000214864.2	1662	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	20.5106679559687	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTTACTCTGTT	NA	False	NA	NA	False	NA	NA	NA	21042539	21034754	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ENSMUST00000214910.2	chr9	+	774	5	FSM	ENSMUSG00000035443.11	ENSMUST00000214910.2	774	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	235.013829380315	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTATCATTGAGTTTTA	NA	False	NA	3	True	AATAAA	-17	NA	26911005	26917227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_26911062_26911246_26911353_26914892_26915061_26916441_26916511_26916852
ENSMUST00000214923.2	chr9	-	1867	6	FSM	ENSMUSG00000042396.11	ENSMUST00000214923.2	1867	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	182.483314305719	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAAGAGAATGTGTCTC	NA	False	NA	-12	True	ATTAAA	-4	NA	48406594	48400008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48405582_48405688_48406454
ENSMUST00000215007.2	chr9	-	1980	3	FSM	ENSMUSG00000038412.9	ENSMUST00000215007.2	1980	3	0	0	0	0	multi-exon	FALSE	canonical	3	2040	junction_2	90	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGATGTCTTGTTTTT	NA	False	NA	-3	True	ATTAAA	-13	NA	121686678	121677628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_121679389_121681556_121681676_121686577
ENSMUST00000215050.2	chr9	+	2050	8	FSM	ENSMUSG00000032123.6	ENSMUST00000215050.2	2050	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	96.7247303919104	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGATCACAGTGCTCC	3802	False	NA	NA	False	AATAAA	-26	NA	44238169	44245191	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44238503_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ENSMUST00000215063.2	chr9	+	570	2	FSM	ENSMUSG00000025794.10	ENSMUST00000215063.2	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	15430	junction_1	0	2923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	737	False	NA	19	True	AATAAA	-23	NA	120402654	120403501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_120402884_120403160
ENSMUST00000215077.2	chr9	+	1028	2	FSM	ENSMUSG00000001014.7	ENSMUST00000215077.2	1028	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGCCTTACGGTTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	20940749	20941890	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_20941120_20941232
ENSMUST00000215151.2	chr9	-	129	1	FSM	ENSMUSG00000111228.2	ENSMUST00000215151.2	129	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14953	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGACAGCTACAGTGTAC	NA	False	NA	NA	False	NA	NA	NA	75427784	75427655	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_75427700_75427800
ENSMUST00000215155.2	chr9	-	3437	16	FSM	ENSMUSG00000056167.9	ENSMUST00000215155.2	3437	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	128.67885952591	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTCAGGAGCCTTTCC	NA	False	NA	NA	False	NA	NA	NA	114469248	114420583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_114420761_114422504_114422581_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUST00000215176.2	chr9	+	1057	6	FSM	ENSMUSG00000036768.7	ENSMUST00000215176.2	1057	6	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_5	25.0391693152948	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTTAAAAAAAAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	122780159	122801410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753
ENSMUST00000215208.2	chr9	-	790	4	FSM	ENSMUSG00000040722.8	ENSMUST00000215208.2	790	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	33.2365260920372	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTCTGTGTGGTGACCA	NA	False	NA	NA	False	GGGGCT	-8	NA	57354675	57350893	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359
ENSMUST00000215233.2	chr9	-	2363	12	FSM	ENSMUSG00000032316.9	ENSMUST00000215233.2	2363	12	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_9	49.1934955049954	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCCTGGTACCAGTGTG	9814	False	NA	-11	True	AATAAA	-19	NA	57672397	57657993	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
ENSMUST00000215300.2	chr9	-	605	5	FSM	ENSMUSG00000038412.9	ENSMUST00000215300.2	605	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	1102.00691921603	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACGGTATTGAATATTG	NA	False	NA	-25	True	AATAAA	-20	NA	121686628	121678603	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121685503_121685652_121686577
ENSMUST00000215307.2	chr9	+	3776	19	FSM	ENSMUSG00000032512.8	ENSMUST00000215307.2	3776	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	68.0088955692063	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTGCTGGACATGTT	NA	False	NA	30	True	AATAAA	-18	NA	119723971	119755653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745858_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ENSMUST00000215356.2	chr9	+	456	4	FSM	ENSMUSG00000043773.6	ENSMUST00000215356.2	456	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.2659863237109	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGTGCTTGTGTCCTTTT	7151	False	NA	NA	False	ATTAAA	-23	NA	121767181	121771063	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_121767229_121768484_121768568_121769749_121769877_121770864
ENSMUST00000215420.2	chr9	+	2128	9	FSM	ENSMUSG00000032114.10	ENSMUST00000215420.2	2128	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	8.7740740252177	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAACAGTCAGTGGCTCA	NA	False	NA	NA	False	AATAAA	-13	NA	44308148	44314257	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44308289_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
ENSMUST00000215568.2	chr9	+	728	2	FSM	ENSMUSG00000032518.7	ENSMUST00000215568.2	728	2	0	0	0	0	multi-exon	FALSE	canonical	3	2998	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAGCTGACAGAGGCAC	NA	False	NA	NA	False	NA	NA	NA	119957871	119959440	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_119958343_119959183
ENSMUST00000215573.2	chr9	+	1292	1	FSM	ENSMUSG00000006932.18	ENSMUST00000215573.2	1292	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	983	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120788281	120789573	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_120788300_120789600
ENSMUST00000215595.2	chr10	-	1576	11	FSM	ENSMUSG00000019792.9	ENSMUST00000215595.2	1576	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	70.5592658691968	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATACTCAGTATTT	NA	False	NA	-2	True	AATAAA	-23	NA	30476691	30410710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30466020_30466156_30466838_30466932_30470110_30470185_30473735_30473802_30476585
ENSMUST00000215610.2	chr9	+	703	4	FSM	ENSMUSG00000009927.10	ENSMUST00000215610.2	703	4	0	0	0	0	multi-exon	FALSE	canonical	3	5317	junction_3	3495.27194936245	5566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGTGCATCTGTTTCCT	NA	False	NA	94	True	AATAAA	-19	NA	44319009	44321491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44319381_44319982_44320167_44321250_44321350_44321442
ENSMUST00000215618.2	chr9	+	1313	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGACAGACTAAATAATGC	778	False	NA	NA	False	NA	NA	NA	22137047	22150739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ENSMUST00000215696.2	chr10	+	5931	3	FSM	ENSMUSG00000038587.11	ENSMUST00000215696.2	5931	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	831.5	1911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTTTTTTTATTAA	NA	False	NA	23	True	AATAAA	-19	NA	4297767	4309470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_4297908_4303141_4307940_4308477
ENSMUST00000215721.2	chr9	+	1685	4	FSM	ENSMUSG00000001833.18	ENSMUST00000215721.2	1685	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	123.205338989654	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATAGTGTGGATCTTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	25163943	25188115	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_25163996_25175498_25175504_25176689_25176793_25186590
ENSMUST00000215822.2	chr9	+	3134	18	FSM	ENSMUSG00000035769.10	ENSMUST00000215822.2	3134	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	17.3265002945415	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCACCTCTCCTTGCT	NA	False	NA	20	True	AATAAA	-20	NA	119186634	119222395	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_119186774_119188297_119188381_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ENSMUST00000215875.2	chr9	+	2105	11	FSM	ENSMUSG00000032192.10	ENSMUST00000215875.2	2105	11	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_6	3.38230690505755	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAAGGGGTATCTTGTC	375	False	NA	1	True	NA	NA	NA	75221417	75253153	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_75221666_75234414_75234552_75239154_75239197_75240090_75240168_75241450_75241584_75242932_75243077_75244552_75244645_75247469_75247519_75250789_75250887_75251762_75251930_75252234
ENSMUST00000215999.2	chr9	-	1895	6	FSM	ENSMUSG00000032172.9	ENSMUST00000215999.2	1895	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2.92574776766556	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTGGGTTGTTTTGTA	NA	False	NA	-3	True	AATAAA	-18	NA	20657645	20578988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20580081_20582995_20583103_20583430_20583651_20583922_20584070_20586869_20587020_20657466
ENSMUST00000216057.2	chr9	-	627	4	FSM	ENSMUSG00000074476.7	ENSMUST00000216057.2	627	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	994.029174622154	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCGTTCATTGATTTAT	NA	False	NA	-22	True	ATTAAA	-12	NA	21671599	21667399	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21667592_21668585_21668691_21668980_21669126_21671414
ENSMUST00000216076.2	chr9	+	393	4	FSM	ENSMUSG00000009927.10	ENSMUST00000216076.2	393	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5446.48059657692	2148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGGGTGCATCTGTTTC	NA	False	NA	92	True	AATAAA	-17	NA	44318991	44321489	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44319055_44319982_44320167_44321250_44321350_44321442
ENSMUST00000216095.2	chr9	-	3924	12	FSM	ENSMUSG00000032316.9	ENSMUST00000216095.2	3924	12	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_11	42.6560334546315	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTTGTGGAAAGCCAAG	9825	False	NA	-11	True	AATAAA	-16	NA	57672386	57657906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57668324_57668998_57669151_57672356
ENSMUST00000216139.3	chr10	+	5950	3	FSM	ENSMUSG00000038587.11	ENSMUST00000216139.3	5950	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	831.5	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTTTTTTTATTAA	NA	False	NA	23	True	AATAAA	-19	NA	4296807	4309470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_4296967_4303141_4307940_4308477
ENSMUST00000216329.2	chr9	-	1559	3	FSM	ENSMUSG00000051705.14	ENSMUST00000216329.2	1559	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGGTGTGTGGTGCA	6440	False	NA	-22	True	AATAAA	-15	NA	59657910	59643752	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_59645152_59657544_59657655_59657860
ENSMUST00000216344.2	chr9	-	2228	18	Antisense	novelGene_ENSMUSG00000003402.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1901	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTACTGGCCACTGCCAGC	2052	False	NA	NA	False	NA	NA	NA	21925518	21914101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr9_-_21914389_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ENSMUST00000216361.2	chr9	+	520	2	FSM	ENSMUSG00000035443.11	ENSMUST00000216361.2	520	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGAAGTGTTTTCTTC	NA	False	NA	33	True	AATAAA	-14	NA	26917900	26918629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_26918248_26918456
ENSMUST00000216365.2	chr9	-	1665	7	FSM	ENSMUSG00000063849.7	ENSMUST00000216365.2	1665	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	15.2059929706094	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGTGTCCTTCTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	57347390	57321243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
ENSMUST00000216380.2	chr9	-	295	2	FSM	ENSMUSG00000038717.10	ENSMUST00000216380.2	295	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTGTTTTCTCTGTC	NA	False	NA	-29	True	AATAAA	-19	NA	44832005	44824567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_44824765_44831907
ENSMUST00000216594.2	chr9	+	1841	8	FSM	ENSMUSG00000032397.8	ENSMUST00000216594.2	1841	8	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	719.77354715471	8054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAAGTTGAGGCTG	9565	False	NA	NA	False	NA	NA	NA	64188884	64212706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_64188935_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUST00000216619.2	chr9	+	526	2	FSM	ENSMUSG00000004096.10	ENSMUST00000216619.2	526	2	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_1	0	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTTGCTACAATTTAT	NA	False	NA	-12	True	AATAAA	-31	NA	14419102	14421858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_14419266_14421495
ENSMUST00000216677.2	chr9	+	5149	35	FSM	ENSMUSG00000035024.17	ENSMUST00000216677.2	5149	35	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	21.5907395566265	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCTAGCATTTATTATAA	NA	False	NA	NA	False	AATAAA	-16	NA	26941944	27006608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ENSMUST00000216755.2	chr9	+	836	4	FSM	ENSMUSG00000032060.11	ENSMUST00000216755.2	836	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6.0184900284226	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTCGTGTTTGCAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	50664319	50667936	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_50664396_50664485_50664778_50665811_50665935_50667591
ENSMUST00000216760.2	chr9	-	665	2	FSM	ENSMUSG00000032436.18	ENSMUST00000216760.2	665	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCTGCAGGCCTGGGG	NA	False	NA	NA	False	NA	NA	NA	114610910	114599788	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_114600279_114610735
ENSMUST00000216768.2	chr9	+	502	5	FSM	ENSMUSG00000031939.17	ENSMUST00000216768.2	502	5	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_2	22.8144690930997	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTATTTTGGGTCTGGA	NA	False	NA	20	True	NA	NA	NA	15224096	15228287	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_15224133_15225285_15225561_15226397_15226428_15226678_15226737_15228184
ENSMUST00000216785.2	chr9	-	1723	10	FSM	ENSMUSG00000056167.9	ENSMUST00000216785.2	1723	10	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_3	40.9103204703612	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGAATCTAAGACCTCA	NA	False	NA	NA	False	NA	NA	NA	114469252	114446595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUST00000216816.2	chr9	+	3755	21	FSM	ENSMUSG00000032212.11	ENSMUST00000216816.2	3755	21	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	63.2220491600834	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTAATGTATTGAGAAC	NA	False	NA	17	True	AATAAA	-18	NA	70450035	70499516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ENSMUST00000216825.2	chr9	+	1210	11	FSM	ENSMUSG00000031939.17	ENSMUST00000216825.2	1210	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	180.996160180265	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACCTTTTATAGTT	NA	False	NA	-1	True	NA	NA	NA	15219041	15228266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226773_15228184
ENSMUST00000216841.2	chr9	+	1426	11	FSM	ENSMUSG00000055720.11	ENSMUST00000216841.2	1426	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	88.2161549830869	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCGTGTCCAGTGCT	NA	False	NA	14	True	AATATA	-15	NA	57818316	57837249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_57818455_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ENSMUST00000216867.2	chr9	+	577	4	FSM	ENSMUSG00000009927.10	ENSMUST00000216867.2	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	11233	junction_1	829.827692958002	6612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGGGTGCATCTGT	NA	False	NA	89	True	AATAAA	-14	NA	44318993	44321486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250
ENSMUST00000216892.2	chr9	+	3684	19	FSM	ENSMUSG00000032178.15	ENSMUST00000216892.2	3684	19	0	0	0	0	multi-exon	FALSE	canonical	3	922	junction_18	377.751077487821	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCTCCGTACTTGAGT	NA	False	NA	23	True	AATACA	-12	NA	21279250	21313090	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ENSMUST00000216921.2	chr9	-	1877	4	FSM	ENSMUSG00000031996.18	ENSMUST00000216921.2	1877	4	0	0	0	0	multi-exon	FALSE	canonical	3	1185	junction_2	69.5621225156974	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACCTTGTGTTCCTGAC	NA	False	NA	-11	True	AATAAA	-17	NA	31064941	31060854	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709
ENSMUST00000216990.2	chr9	+	598	4	FSM	ENSMUSG00000025794.10	ENSMUST00000216990.2	598	4	0	0	0	0	multi-exon	FALSE	canonical	2	573	junction_1	6865.05966632645	5499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	NA	False	NA	19	True	AATAAA	-23	NA	120401160	120403501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_120401264_120402641_120402742_120402829_120402884_120403160
ENSMUST00000217055.2	chr9	+	856	4	FSM	ENSMUSG00000032399.9	ENSMUST00000217055.2	856	4	0	0	0	0	multi-exon	FALSE	canonical	3	17440	junction_1	1472.4913883921	1466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATCAAAAAGGTAAGCTCA	NA	False	NA	NA	False	AAGAAA	-17	NA	64080674	64083487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_64080716_64082105_64082278_64082475_64083005_64083373
ENSMUST00000217148.2	chr9	-	3466	16	FSM	ENSMUSG00000056167.9	ENSMUST00000217148.2	3466	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	135.431589946938	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTAGCTCTCTCTTGGTG	NA	False	NA	NA	False	NA	NA	NA	114469134	114415033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUST00000217150.2	chr9	-	951	4	FSM	ENSMUSG00000079677.3	ENSMUST00000217150.2	951	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	55.4276304943863	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCCGACATGTTTTGTG	NA	False	NA	-8	True	AATAAA	-11	NA	20984910	20978816	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559
ENSMUST00000217159.2	chr9	-	552	2	FSM	ENSMUSG00000038086.5	ENSMUST00000217159.2	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTGCTGCTTCTGT	NA	False	NA	-7	True	AATAAA	-16	NA	50663654	50662377	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_50662752_50663476
ENSMUST00000217163.2	chr9	-	1185	4	FSM	ENSMUSG00000032112.11	ENSMUST00000217163.2	1185	4	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_3	146.917210246678	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTTCTCTCCTAACTG	1741	False	NA	-10	True	AATAAA	-15	NA	44318629	44315057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_44315758_44316539_44316644_44318100_44318276_44318423
ENSMUST00000217176.2	chr9	-	3111	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	167.860448931548	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATATTTCTAAGATGCTG	8302	False	NA	NA	False	CATAAA	-25	NA	95393938	95343457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ENSMUST00000217213.2	chr9	+	1398	11	FSM	ENSMUSG00000023345.18	ENSMUST00000217213.2	1398	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	97.1745337009651	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGCCACATCTTACCCA	NA	False	NA	6	True	AATAAA	-18	NA	106158808	106227075	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_106158911_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
ENSMUST00000217236.2	chr9	-	1003	5	FSM	ENSMUSG00000032065.7	ENSMUST00000217236.2	1003	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.8483869768736	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCTGGCTATTTTTTTA	6962	False	NA	NA	False	AATAAA	-15	NA	50472625	50468118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_50468792_50469548_50469601_50469686_50469799_50470519_50470586_50472525
ENSMUST00000217278.2	chr8	+	1726	6	FSM	ENSMUSG00000039328.12	ENSMUST00000217278.2	1726	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.55527776692624	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATTAAATTTAATAACA	NA	False	NA	-23	True	TTTAAA	-1	NA	31601857	31619661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_31602201_31608458_31608616_31614879_31614926_31615193_31615236_31618279_31618363_31618606
ENSMUST00000217317.2	chr9	+	1599	6	FSM	ENSMUSG00000032518.7	ENSMUST00000217317.2	1599	6	0	0	0	0	multi-exon	FALSE	canonical	3	2998	junction_2	1090.74407630755	59385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119956909	119960625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ENSMUST00000217340.2	chr10	-	365	2	FSM	ENSMUSG00000069682.7	ENSMUST00000217340.2	365	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGGAAAAAAAAAATCAATAG	NA	False	NA	-10	True	AATAAA	-19	NA	29575277	29574743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_29575071_29575239
ENSMUST00000217356.2	chr9	+	1101	7	FSM	ENSMUSG00000032518.7	ENSMUST00000217356.2	1101	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1986.85748524313	124201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119956854	119960625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_119956897_119957522_119957689_119958223_119958343_119959110_119959430_119959833_119959963_119960065_119960232_119960465
ENSMUST00000217381.2	chr9	+	1789	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	5323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGAGTGGCTTTTCTTCT	368	False	NA	22	True	AATAAA	-26	NA	45281482	45307457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ENSMUST00000217382.2	chr9	-	1696	3	FSM	ENSMUSG00000074476.7	ENSMUST00000217382.2	1696	3	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_2	208.5	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTGTCTGCATGTGT	NA	False	NA	0	True	NA	NA	NA	21671578	21667303	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21668691_21668980_21669126_21671414
ENSMUST00000217461.2	chr9	+	3478	22	FSM	ENSMUSG00000057193.9	ENSMUST00000217461.2	3478	22	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	41.7821257447013	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	6580	False	NA	19	True	AATAAA	-19	NA	21231993	21266324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ENSMUST00000217475.2	chr9	+	1117	4	FSM	ENSMUSG00000032060.11	ENSMUST00000217475.2	1117	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	7.40870359029762	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTCGTGTTTGCAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	50662624	50667936	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_50662877_50664380_50664778_50665811_50665935_50667591
ENSMUST00000217484.2	chr9	+	2580	11	FSM	ENSMUSG00000032279.12	ENSMUST00000217484.2	2580	11	0	0	0	0	multi-exon	FALSE	canonical	3	1656	junction_1	98.4146330583008	5987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGGCGTTTGCATTCTC	NA	False	NA	35	True	AATAAA	-15	NA	54493617	54511945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUST00000217524.2	chr9	-	1819	1	FSM	ENSMUSG00000110816.2	ENSMUST00000217524.2	1819	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGATCCCAGACCCCATG	NA	False	NA	NA	False	NA	NA	NA	18211947	18210128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_18210100_18211900
ENSMUST00000217537.2	chr10	-	2526	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	1802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATAGTTGATGGTTGCA	8586	False	NA	-31	True	AATAAA	-15	NA	40133667	40123698	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
ENSMUST00000217641.2	chr9	-	3462	16	FSM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_10	230.67090554872	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8743	False	NA	-9	True	AATAAA	-19	NA	31123083	31060852	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUST00000217643.2	chr9	-	1447	6	FSM	ENSMUSG00000001348.16	ENSMUST00000217643.2	1447	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	116.082039954508	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCCAGAATGGGTGTGT	8896	False	NA	-30	True	AATAAA	-10	NA	22043127	22038033	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22041818_22041905_22043032
ENSMUST00000217733.2	chr10	-	1668	5	FSM	ENSMUSG00000090841.3	ENSMUST00000217733.2	1668	5	0	0	0	0	multi-exon	FALSE	canonical	3	2189	junction_2	245.142305610435	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8245	False	NA	-5	True	AATAAA	-20	NA	128329723	128326729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ENSMUST00000217748.2	chr10	+	944	4	FSM	ENSMUSG00000020310.10	ENSMUST00000217748.2	944	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	3.29983164553722	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCCAGAGCTAAATAAAA	3183	False	NA	NA	False	NA	NA	NA	79500420	79504339	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79500502_79500745_79501013_79501264_79501592_79504070
ENSMUST00000217777.2	chr10	-	455	5	FSM	ENSMUSG00000062981.6	ENSMUST00000217777.2	455	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1680.921826707	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAAAAATAAAAATACCC	NA	False	NA	-37	True	NA	NA	NA	95337789	95316695	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_95316840_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ENSMUST00000217809.2	chr10	-	1115	3	FSM	ENSMUSG00000045867.11	ENSMUST00000217809.2	1115	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	28	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTCTTTCAATGAGAG	NA	False	NA	2	True	AATAAA	-22	NA	95159427	95011126	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_95011841_95158447_95158752_95159330
ENSMUST00000217811.2	chr10	+	1316	7	FSM	ENSMUSG00000009092.6	ENSMUST00000217811.2	1316	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.48988969733353	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTCAATATGTTAGT	NA	False	NA	NA	False	NA	NA	NA	75729248	75731775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_75729352_75729455_75729519_75729603_75729678_75729800_75729895_75730265_75730462_75730872_75730964_75731080
ENSMUST00000217842.2	chr10	+	5014	33	FSM	ENSMUSG00000034560.7	ENSMUST00000217842.2	5014	33	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_5	77.5305383381284	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGAGTGGAGATACAGT	NA	False	NA	NA	False	NA	NA	NA	83379615	83431298	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386750_83386813_83390597_83390681_83391436_83391480_83391864_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ENSMUST00000217874.2	chr10	+	329	2	FSM	ENSMUSG00000112639.2	ENSMUST00000217874.2	329	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTCTCTTTTTAAATTT	NA	False	NA	NA	False	AATAAA	-13	NA	126906349	126906970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_126906494_126906785
ENSMUST00000217876.2	chr10	-	2156	15	FSM	ENSMUSG00000035673.11	ENSMUST00000217876.2	2156	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_14	37.9085903785645	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGGGTCTCCATTCCTC	5655	False	NA	0	True	AATAAA	-21	NA	79911273	79898249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79911061
ENSMUST00000217884.2	chr10	-	2799	7	FSM	ENSMUSG00000069520.7	ENSMUST00000217884.2	2799	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	78.0590944235342	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	-4	True	TATAAA	-19	NA	115198406	115176646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197753_115198291
ENSMUST00000217887.2	chr10	-	3084	6	FSM	ENSMUSG00000069520.7	ENSMUST00000217887.2	3084	6	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_4	16.3291151015602	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	-4	True	TATAAA	-19	NA	115198152	115176646	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713
ENSMUST00000217908.2	chr10	+	1350	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_10	363.653962004586	1449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTCATTTACTTACAGC	NA	False	NA	-11	True	NA	NA	NA	111309102	111331980	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ENSMUST00000217932.2	chr12	-	457	3	FSM	ENSMUSG00000112819.2	ENSMUST00000217932.2	457	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	2.5	3075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	4603785	4602545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_4602746_4603013_4603176_4603690
ENSMUST00000217969.2	chr10	-	608	6	FSM	ENSMUSG00000090841.3	ENSMUST00000217969.2	608	6	0	0	0	0	multi-exon	FALSE	canonical	2	43	junction_4	956.330152196405	4112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTTCTTTCTTTCT	8242	False	NA	-7	True	AATAAA	-18	NA	128329726	128326731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328579_128329407_128329436_128329677
ENSMUST00000218004.2	chr10	-	6005	25	FSM	ENSMUSG00000034667.9	ENSMUST00000218004.2	6005	25	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_24	166.742560845221	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462237	121423284	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ENSMUST00000218036.2	chr10	-	772	3	FSM	ENSMUSG00000035278.10	ENSMUST00000218036.2	772	3	0	0	0	0	multi-exon	FALSE	canonical	3	1230	junction_2	7.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80633722	80631932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80632357_80632424_80632657_80633606
ENSMUST00000218054.3	chr12	-	1856	2	FSM	ENSMUSG00000093847.3	ENSMUST00000218054.3	1856	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGCAGTCTGATGGTCT	NA	False	NA	NA	False	AATAAA	-31	NA	88290796	88286891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_88288562_88290610
ENSMUST00000218055.2	chr10	-	2180	11	FSM	ENSMUSG00000039531.9	ENSMUST00000218055.2	2180	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_10	16.213882940246	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGTTTCTTGTCTAT	NA	False	NA	-1	True	AATAAA	-20	NA	33827255	33795137	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827126
ENSMUST00000218095.2	chr10	+	1622	3	FSM	ENSMUSG00000097412.3	ENSMUST00000218095.2	1622	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	95.5	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTTATGTGTATGAGT	NA	False	NA	1	True	AGTAAA	-10	NA	86521388	86525818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_86521473_86521743_86521861_86524397
ENSMUST00000218106.2	chr10	+	1483	2	FSM	ENSMUSG00000097412.3	ENSMUST00000218106.2	1483	2	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGGAAGGAAGGAAGA	NA	False	NA	NA	False	GGGGCT	-45	NA	86521644	86525664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_86521861_86524397
ENSMUST00000218107.2	chr10	-	584	6	FSM	ENSMUSG00000061983.8	ENSMUST00000218107.2	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	2594	junction_5	774.773670177298	275594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23663173	23661080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891_23662943_23663053
ENSMUST00000218119.2	chr10	-	609	4	FSM	ENSMUSG00000035215.10	ENSMUST00000218119.2	609	4	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	2094.66343093321	8617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCTCCCTTCCTGCT	NA	False	NA	-23	True	AATAAA	-15	NA	80691027	80688668	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80688935_80689591_80689664_80690451_80690543_80690847
ENSMUST00000218127.2	chr10	-	691	7	FSM	ENSMUSG00000090841.3	ENSMUST00000218127.2	691	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	1160.32375750142	12854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8242	False	NA	-5	True	AATAAA	-20	NA	128329726	128326729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128326903_128327588_128327634_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ENSMUST00000218142.2	chr10	-	474	4	FSM	ENSMUSG00000061983.8	ENSMUST00000218142.2	474	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	1924.28809346903	4941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23662700	23661080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662522
ENSMUST00000218208.2	chr10	-	1964	12	FSM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	0	0	0	0	multi-exon	TRUE	canonical	3	688	junction_11	105.465203223192	2032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTCTCTGCTTCCTGT	4772	False	NA	-13	True	AATAAA	-15	NA	80896012	80879910	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ENSMUST00000218218.2	chr10	+	1143	4	FSM	ENSMUSG00000064030.16	ENSMUST00000218218.2	1143	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	140.632697320202	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCAGGCTTTGGCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	128584396	128602433	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128584436_128586151_128586207_128601015_128601110_128601478
ENSMUST00000218221.2	chr10	-	460	5	FSM	ENSMUSG00000061983.8	ENSMUST00000218221.2	460	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1861.96017344625	17370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTCTCTTGTATTTCT	NA	False	NA	-18	True	AATAAA	-13	NA	23663115	23661095	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23663053
ENSMUST00000218267.2	chr10	-	600	2	FSM	ENSMUSG00000033307.8	ENSMUST00000218267.2	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	12818	junction_1	0	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTGAGCCTCGCTCCA	NA	False	NA	-107	True	NA	NA	NA	75696026	75695283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_75695378_75695520
ENSMUST00000218275.2	chr10	-	1872	9	FSM	ENSMUSG00000039531.9	ENSMUST00000218275.2	1872	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	25.4923395356331	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGTTTTGGTTTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	33825856	33795143	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33816153_33816276_33819645_33819757_33824924_33825495_33825743
ENSMUST00000218311.2	chr14	+	1201	15	FSM	ENSMUSG00000112858.3	ENSMUST00000218311.2	1201	15	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	4.37525509460387	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAAACTGTGTGTGT	NA	False	NA	1	True	ATTAAA	-5	NA	55051597	55091552	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55051743_55053942_55054044_55056993_55057047_55057594_55057670_55075569_55075686_55076681_55076743_55077723_55077753_55079339_55079387_55079595_55079639_55079805_55079867_55080243_55080293_55086123_55086164_55086751_55086847_55087992_55088055_55091328
ENSMUST00000218315.2	chr10	+	4379	26	FSM	ENSMUSG00000005682.10	ENSMUST00000218315.2	4379	26	0	0	0	0	multi-exon	FALSE	canonical	2	164	junction_12	40.3480061465248	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139242	128157222	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ENSMUST00000218438.2	chr10	-	414	2	FSM	ENSMUSG00000047146.18	ENSMUST00000218438.2	414	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAAGCAATTAATTAAAAGA	2991	False	NA	-19	True	NA	NA	NA	62723103	62715651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62715913_62722950
ENSMUST00000218576.2	chr10	-	3092	28	FSM	ENSMUSG00000052798.14	ENSMUST00000218576.2	3092	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	174.862046350179	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGAGTTTTCTCTTATG	NA	False	NA	-4	True	AATAAA	-29	NA	117628569	117586525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610494_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ENSMUST00000218651.2	chr10	-	679	3	FSM	ENSMUSG00000045867.11	ENSMUST00000218651.2	679	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	4	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGGTGGCATTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	95159995	95146844	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_95147087_95158447_95158752_95159862
ENSMUST00000218795.2	chr10	+	1861	2	FSM	ENSMUSG00000112530.2	ENSMUST00000218795.2	1861	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	828	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTCACCTTTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	53445764	53447678	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_53445971_53446023
ENSMUST00000218810.2	chr10	-	1233	9	FSM	ENSMUSG00000052798.14	ENSMUST00000218810.2	1233	9	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_2	29.4522919311893	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGTCTTTCTTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	117628603	117613155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ENSMUST00000218875.2	chr10	+	3020	12	FSM	ENSMUSG00000032763.12	ENSMUST00000218875.2	3020	12	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_8	17.4725286148956	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATACTGGTTTATT	5486	False	NA	30	True	AATAAA	-39	NA	78410420	78420336	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297
ENSMUST00000218885.2	chr10	+	2233	15	FSM	ENSMUSG00000032763.12	ENSMUST00000218885.2	2233	15	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_8	19.815990244945	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCAAGGACTCAGTCACA	5893	False	NA	7	True	AATAAA	-16	NA	78410827	78420313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ENSMUST00000218893.2	chr10	-	661	6	FSM	ENSMUSG00000062981.6	ENSMUST00000218893.2	661	6	0	0	0	0	multi-exon	FALSE	canonical	3	2875	junction_5	503.887924046608	10206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCAAGTGTGTATTTCA	NA	False	NA	-11	True	AATAAA	-14	NA	95337802	95316669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ENSMUST00000218964.2	chr10	+	979	5	FSM	ENSMUSG00000020307.16	ENSMUST00000218964.2	979	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_4	778.055749930556	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCTGAGAGAATCACCT	NA	False	NA	17	True	AATAAA	-17	NA	79518307	79524228	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523686
ENSMUST00000219019.2	chr10	-	677	6	FSM	ENSMUSG00000062981.6	ENSMUST00000219019.2	677	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	1931.1881316951	9810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95336385	95316666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_95316840_95326107_95326275_95326396_95326444_95329492_95329578_95332685_95332750_95336244
ENSMUST00000219021.2	chr10	-	388	2	FSM	ENSMUSG00000097134.3	ENSMUST00000219021.2	388	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCAACCTCTAACTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	66753518	66751414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_66751739_66753454
ENSMUST00000219037.2	chr10	+	1383	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	0	0	0	0	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	6025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTATTCAGTGTGTAC	NA	False	NA	NA	False	NA	NA	NA	128158327	128163422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ENSMUST00000219062.2	chr12	-	1118	3	FSM	ENSMUSG00000112880.2	ENSMUST00000219062.2	1118	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACACTAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	80992170	80989446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_80989717_80989815_80990004_80991510
ENSMUST00000219069.2	chr12	+	605	2	FSM	ENSMUSG00000051721.7	ENSMUST00000219069.2	605	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACATGGTGGTGTGTGCC	NA	False	NA	NA	False	AATAAA	-15	NA	4893327	4899343	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_4893452_4898862
ENSMUST00000219099.2	chr10	-	2971	6	FSM	ENSMUSG00000025358.17	ENSMUST00000219099.2	2971	6	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_2	293.827160078846	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAGAGTGAATCTCTTT	8247	False	NA	-21	True	ATTAAA	-15	NA	128540900	128533812	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794
ENSMUST00000219109.2	chr10	-	1844	11	FSM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_7	35.031985384788	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCGTGTGTCTTTCTTA	NA	False	NA	-7	True	AATAAA	-10	NA	116786336	116742681	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
ENSMUST00000219143.2	chr10	+	1365	13	FSM	ENSMUSG00000058799.17	ENSMUST00000219143.2	1365	13	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_10	384.309843167665	2311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTTTTTTTTATTTCA	NA	False	NA	4	True	AATAAA	-21	NA	111309141	111330870	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
ENSMUST00000219215.2	chr10	-	1051	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219215.2	1051	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	384.57248991575	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCATAATGCTGGGGA	NA	False	NA	7	True	AATAAA	-45	NA	128657475	128654350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128654885_128655822_128655975_128656129_128656430_128657410
ENSMUST00000219236.2	chr10	-	692	7	FSM	ENSMUSG00000090841.3	ENSMUST00000219236.2	692	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	1170.06704461278	11059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTTCTTTCTTTCT	8252	False	NA	-7	True	AATAAA	-18	NA	128329716	128326731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128326903_128327158_128327217_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ENSMUST00000219239.2	chr10	-	2238	12	FSM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_11	417.657853565126	3243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358255	127352991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ENSMUST00000219260.2	chr10	-	4850	33	FSM	ENSMUSG00000035673.11	ENSMUST00000219260.2	4850	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_32	40.6571867686083	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGCCTACAGGTCAG	NA	False	NA	4	True	AATATA	-21	NA	79940204	79892825	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894567_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443_79938556_79940035
ENSMUST00000219273.2	chr10	+	676	2	FSM	ENSMUSG00000052291.9	ENSMUST00000219273.2	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCGCACCGAAAACTTC	NA	False	NA	NA	False	AATAAA	-34	NA	116417480	116419419	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_116417628_116418890
ENSMUST00000219317.2	chr10	+	1109	9	FSM	ENSMUSG00000025351.15	ENSMUST00000219317.2	1109	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1695.03832921265	9662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	NA	False	NA	35	True	ATTAAA	-27	NA	128736857	128748691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128737005_128744769_128744922_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ENSMUST00000219374.2	chr10	-	1852	12	FSM	ENSMUSG00000061032.10	ENSMUST00000219374.2	1852	12	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_11	269.317686996093	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTCCCATTTTT	NA	False	NA	-17	True	AATAAA	-21	NA	78248826	78236217	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_78236819_78237683_78237801_78238258_78238279_78238443_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78248653
ENSMUST00000219400.2	chr10	-	3005	21	FSM	ENSMUSG00000020115.4	ENSMUST00000219400.2	3005	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	34.6538598138793	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTTGTGTGCTTTT	3888	False	NA	-5	True	AATAAA	-17	NA	121422682	121382364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412182_121412309_121414484_121414626_121420100_121420247_121422599
ENSMUST00000219435.2	chr10	+	405	2	FSM	ENSMUSG00000049422.8	ENSMUST00000219435.2	405	2	0	0	0	0	multi-exon	FALSE	canonical	3	16591	junction_1	0	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTGCTGTGTGCCCAT	8593	False	NA	20	True	ATTAAA	-17	NA	75773053	75773578	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_75773289_75773408
ENSMUST00000219442.3	chr10	+	3531	14	FSM	ENSMUSG00000020250.12	ENSMUST00000219442.3	3531	14	0	0	0	0	multi-exon	TRUE	canonical	1	267	junction_2	143.143532881919	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCGTGCCTTCTGACTGA	NA	False	NA	13	True	AATAAA	-14	NA	82696134	82733544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ENSMUST00000219512.2	chr10	+	953	12	FSM	ENSMUSG00000078427.4	ENSMUST00000219512.2	953	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1650.06371026512	13185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGTGTTTTATTAGGT	NA	False	NA	NA	False	AATAAA	-13	NA	128657765	128713493	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128657841_128666819_128666854_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ENSMUST00000219527.2	chr10	-	3862	25	FSM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	85.6392222576133	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTCTTTTATTGAAGT	NA	False	NA	1	True	AATAAA	-35	NA	62628065	62580240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ENSMUST00000219554.2	chr10	-	790	5	FSM	ENSMUSG00000090841.3	ENSMUST00000219554.2	790	5	0	0	0	0	multi-exon	FALSE	canonical	3	2189	junction_3	229.335998046534	9209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8340	False	NA	-5	True	AATAAA	-20	NA	128329628	128326729	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328615_128329407
ENSMUST00000219555.2	chr12	+	2526	1	FSM	ENSMUSG00000059970.8	ENSMUST00000219555.2	2526	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGCTGTCTGGCGTTT	NA	False	NA	NA	False	AGTAAA	-16	NA	76451182	76453708	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_76451200_76453700
ENSMUST00000219574.2	chr10	-	2288	7	FSM	ENSMUSG00000020078.17	ENSMUST00000219574.2	2288	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	463.80362822595	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	5271	False	NA	-6	True	AATAAA	-17	NA	62322511	62291050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62305679_62305837_62316336_62316487_62322436
ENSMUST00000219583.2	chr10	+	670	3	FSM	ENSMUSG00000112188.2	ENSMUST00000219583.2	670	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTAAGTAATCTAGG	3220	False	NA	NA	False	NA	NA	NA	95567088	95575215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_95567365_95570676_95570791_95574935
ENSMUST00000219591.2	chr10	-	596	3	FSM	ENSMUSG00000025362.7	ENSMUST00000219591.2	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	15147	junction_1	3128	144613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATCGGAGTGTGTTTAT	NA	False	NA	-9	True	NA	NA	NA	128462293	128460402	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128460506_128461075_128461207_128461931
ENSMUST00000219706.2	chr12	+	5427	6	FSM	ENSMUSG00000048833.10	ENSMUST00000219706.2	5427	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	42.8	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTGGCTCTTTACTTA	NA	False	NA	17	True	ATTAAA	-22	NA	80690656	80730116	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80726248
ENSMUST00000219721.2	chr10	+	4316	26	FSM	ENSMUSG00000005682.10	ENSMUST00000219721.2	4316	26	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_2	56.9842083388021	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139245	128157216	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128139341_128139963_128140363_128143987_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ENSMUST00000219731.2	chr10	-	2705	2	FSM	ENSMUSG00000112731.2	ENSMUST00000219731.2	2705	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGGAATAACAGTGT	NA	False	NA	NA	False	NA	NA	NA	53451852	53446720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_53449311_53451737
ENSMUST00000219748.2	chr10	-	1031	3	FSM	ENSMUSG00000112373.2	ENSMUST00000219748.2	1031	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATATTAGTTAGAGACTG	NA	False	NA	NA	False	AATATA	-33	NA	81893073	81891941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_81892348_81892370_81892936_81893013
ENSMUST00000219773.2	chr10	-	903	2	FSM	ENSMUSG00000025362.7	ENSMUST00000219773.2	903	2	0	0	0	0	multi-exon	FALSE	canonical	3	11844	junction_1	0	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATCACAGGAAAGGGCG	NA	False	NA	NA	False	AGTAAA	-37	NA	128462393	128461255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128462110_128462344
ENSMUST00000219778.2	chr10	+	1230	6	FSM	ENSMUSG00000044475.15	ENSMUST00000219778.2	1230	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	94.044670237074	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAAATCTGTATTTTAT	NA	False	NA	NA	False	ATTAAA	-35	NA	59838626	59862161	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59861544
ENSMUST00000219783.2	chr10	-	488	2	FSM	ENSMUSG00000061983.8	ENSMUST00000219783.2	488	2	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	0	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGATTTTTCTCTTG	NA	False	NA	-25	True	AATAAA	-6	NA	23661892	23661102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_23661172_23661473
ENSMUST00000219855.2	chr12	-	296	1	FSM	ENSMUSG00000020648.4	ENSMUST00000219855.2	296	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTGAGTTGGTCTGG	9110	False	NA	NA	False	AATAAA	-21	NA	31704775	31704479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_31704500_31704800
ENSMUST00000219896.2	chr10	-	542	3	FSM	ENSMUSG00000020219.8	ENSMUST00000219896.2	542	3	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_2	1726.5	4376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCACCTCACTGCTTCA	5632	False	NA	-7	True	AATAAA	-25	NA	80736619	80735737	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80736094_80736315_80736385_80736502
ENSMUST00000219915.2	chr10	+	2733	18	FSM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_14	97.3053197904183	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTGCAAAAATGTGT	NA	False	NA	12	True	AATAAA	-14	NA	21171931	21244782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ENSMUST00000219961.2	chr10	+	1512	14	FSM	ENSMUSG00000058799.17	ENSMUST00000219961.2	1512	14	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_13	616.19895158057	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAGAAGGAGATGAG	NA	False	NA	NA	False	AATATA	-6	NA	111309087	111331189	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111330911
ENSMUST00000220027.2	chr10	-	1307	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220027.2	1307	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	35.9400542570542	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTCATTTTTTGAG	7245	False	NA	-3	True	AATAAA	-12	NA	128204560	128198968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204387
ENSMUST00000220042.2	chr10	+	2430	14	FSM	ENSMUSG00000019878.9	ENSMUST00000220042.2	2430	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	91.2063140137586	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACTATTGTTTGTTGAG	NA	False	NA	13	True	AATAAA	-14	NA	57362520	57388960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_57362698_57366953_57367026_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57385156_57385211_57387539_57387625_57387998
ENSMUST00000220046.2	chr12	+	3040	27	FSM	ENSMUSG00000021048.8	ENSMUST00000220046.2	3040	27	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	281.366814005612	2543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGGTGTTGAAACATAA	8026	False	NA	8	True	AATAAA	-16	NA	76302186	76366576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_76302319_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ENSMUST00000220070.2	chr10	-	494	5	FSM	ENSMUSG00000061983.8	ENSMUST00000220070.2	494	5	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	596.623153674076	104604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTCTCTTGTATTTCT	NA	False	NA	-18	True	AATAAA	-13	NA	23662987	23661095	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891
ENSMUST00000220107.2	chr10	+	767	4	FSM	ENSMUSG00000020224.16	ENSMUST00000220107.2	767	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	586.90373997786	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAAACTTTGTTTTCAGT	NA	False	NA	-91	True	NA	NA	NA	120063006	120067469	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_120063029_120063878_120064109_120066314_120066468_120067107
ENSMUST00000220110.2	chr10	-	768	3	FSM	ENSMUSG00000078453.4	ENSMUST00000220110.2	768	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	67	2588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTCCTGGTGGCTGTG	NA	False	NA	-8	True	AATAAA	-18	NA	17898966	17887011	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_17887565_17894586_17894650_17898814
ENSMUST00000220127.2	chr10	+	1103	4	FSM	ENSMUSG00000074781.6	ENSMUST00000220127.2	1103	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	985.351826619417	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCCTTTGTACAGTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	95351046	95378868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_95351100_95377066_95377241_95377499_95377641_95378133
ENSMUST00000220169.2	chr10	-	646	4	FSM	ENSMUSG00000112375.2	ENSMUST00000220169.2	646	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTCAACCACCGTGGACA	NA	False	NA	NA	False	NA	NA	NA	82694842	82681566	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_82681831_82686362_82686557_82692955_82693092_82694790
ENSMUST00000220170.2	chr12	+	1950	3	FSM	ENSMUSG00000051721.7	ENSMUST00000220170.2	1950	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	37	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAGAAAAGGAAACGT	NA	False	NA	NA	False	NA	NA	NA	4893393	4901767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_4893452_4898862_4899114_4900126
ENSMUST00000220171.2	chr10	-	1795	3	FSM	ENSMUSG00000061983.8	ENSMUST00000220171.2	1795	3	0	0	0	0	multi-exon	FALSE	canonical	3	2594	junction_2	565	3018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTTTGCTGGTATA	NA	False	NA	-4	True	AATAAA	-27	NA	23663100	23661081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_23662779_23662891_23662943_23663053
ENSMUST00000220215.2	chr12	+	2202	4	FSM	ENSMUSG00000051721.7	ENSMUST00000220215.2	2202	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.90668171555645	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGATTTATTCATT	NA	False	NA	NA	False	NA	NA	NA	4893302	4906967	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_4893452_4900126_4901943_4905277_4905393_4906845
ENSMUST00000220225.2	chr10	-	1129	3	FSM	ENSMUSG00000035215.10	ENSMUST00000220225.2	1129	3	0	0	0	0	multi-exon	FALSE	canonical	3	2872	junction_2	840	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTCTGTAACTTTGATC	NA	False	NA	-9	True	AATAAA	-29	NA	80691043	80688654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80689664_80690451_80690543_80691014
ENSMUST00000220279.2	chr10	-	1613	2	FSM	ENSMUSG00000045867.11	ENSMUST00000220279.2	1613	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTGCGTGTCCATT	NA	False	NA	NA	False	ATTAAA	-13	NA	95158827	95010607	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_95011841_95158447
ENSMUST00000220287.2	chr10	+	2726	4	FSM	ENSMUSG00000112160.2	ENSMUST00000220287.2	2726	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	4.78423336480244	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATATACTGCCATCCAT	NA	False	NA	NA	False	AATAAA	-19	NA	81919186	81947050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_81919247_81943643_81943771_81943972_81944034_81944572
ENSMUST00000220301.2	chr10	+	720	5	FSM	ENSMUSG00000020186.8	ENSMUST00000220301.2	720	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	90.0860699553488	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCTTTCAGAGGAGCTG	NA	False	NA	31	True	AATAAA	-32	NA	110770531	110775375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_110770555_110771008_110771178_110773597_110773728_110774497_110774592_110775071
ENSMUST00000220381.2	chr10	+	1084	12	FSM	ENSMUSG00000078427.4	ENSMUST00000220381.2	1084	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	1706.39307380042	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128657800	128713498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_128657841_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128687606_128687802_128689051_128689121_128708289_128708380_128713201
ENSMUST00000220406.2	chr10	-	550	4	FSM	ENSMUSG00000035215.10	ENSMUST00000220406.2	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	2083.35727986237	8613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTCCCTTCCTGCTCT	NA	False	NA	-21	True	AATAAA	-17	NA	80690977	80688666	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_80688935_80689591_80689664_80690451_80690543_80690858
ENSMUST00000220419.2	chr10	+	1665	3	FSM	ENSMUSG00000097412.3	ENSMUST00000220419.2	1665	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	104.5	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTTATGTGTATGAGT	NA	False	NA	1	True	AGTAAA	-10	NA	86521474	86525818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_86521602_86521743_86521861_86524397
ENSMUST00000220595.2	chr13	-	604	4	FSM	ENSMUSG00000113406.2	ENSMUST00000220595.2	604	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	43.3666538560063	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGATGTTACTTTTTTG	7281	False	NA	NA	False	NA	NA	NA	65496411	65484035	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_65484338_65488362_65488424_65488791_65488919_65496297
ENSMUST00000220621.2	chr13	-	3013	3	FSM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	0	0	0	0	multi-exon	FALSE	canonical	3	1082	junction_1	15.5	5453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTTGAGTTTTTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	14787750	14782768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_14785326_14786007_14786190_14787476
ENSMUST00000220682.2	chr12	+	507	2	FSM	ENSMUSG00000113209.2	ENSMUST00000220682.2	507	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAAGGGCCTGACACA	NA	False	NA	NA	False	AATAAA	-14	NA	54909775	54910449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_54909895_54910061
ENSMUST00000220685.2	chr12	+	329	2	FSM	ENSMUSG00000021177.17	ENSMUST00000220685.2	329	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTACTGTGAGACCTTTA	NA	False	NA	3	True	NA	NA	NA	99881724	99885563	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_99881817_99885326
ENSMUST00000220713.2	chr13	-	2874	2	FSM	ENSMUSG00000021417.16	ENSMUST00000220713.2	2874	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCGGTCTCAGTGTCT	969	False	NA	NA	False	NA	NA	NA	35211079	35189196	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_35191983_35210991
ENSMUST00000220724.2	chr12	-	652	1	FSM	ENSMUSG00000113188.2	ENSMUST00000220724.2	652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	401	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGAGGAGGGGTGTCAGG	NA	False	NA	NA	False	NA	NA	NA	13487099	13486447	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_13486400_13487100
ENSMUST00000220798.2	chr12	+	3457	15	FSM	ENSMUSG00000035597.20	ENSMUST00000220798.2	3457	15	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_9	125.885678620058	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATTGTTGATGAATTCA	7508	False	NA	19	True	AATAAA	-16	NA	65083107	65108929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_65083243_65089234_65089582_65090005_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ENSMUST00000220819.2	chr13	+	633	5	FSM	ENSMUSG00000042043.7	ENSMUST00000220819.2	633	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	650.566820165308	14891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAATTTTCAGTTGGCCA	NA	False	NA	37	True	AATAAA	-37	NA	94925417	94979430	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_94925511_94951618_94951693_94968867_94968974_94973615_94973703_94979157
ENSMUST00000220821.2	chr12	-	1118	6	FSM	ENSMUSG00000021094.11	ENSMUST00000220821.2	1118	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	46.0721173813403	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTTGTACAAGAGC	NA	False	NA	-14	True	AATAAA	-18	NA	72711580	72697183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_72697392_72699008_72699225_72699874_72699998_72703073_72703314_72706117_72706271_72711402
ENSMUST00000220829.2	chr12	-	2458	1	FSM	ENSMUSG00000113476.2	ENSMUST00000220829.2	2458	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAATAAATAACAGAAA	NA	False	NA	NA	False	NA	NA	NA	13475718	13473260	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_13473300_13475700
ENSMUST00000220899.2	chr12	-	1994	2	FSM	ENSMUSG00000047832.10	ENSMUST00000220899.2	1994	2	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	0	1792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAATGTGTTAGGAGC	9612	False	NA	-8	True	ATTAAA	-11	NA	112793043	112783856	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_112785733_112792925
ENSMUST00000220916.2	chr12	+	1599	6	FSM	ENSMUSG00000054894.7	ENSMUST00000220916.2	1599	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	68.5787138987018	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGCTAGTCTTTACTT	NA	False	NA	4	True	AATAAA	-16	NA	69771723	69791434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_69771789_69772228_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ENSMUST00000220945.2	chr13	-	364	2	FSM	ENSMUSG00000113955.2	ENSMUST00000220945.2	364	2	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_1	0	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCCTTCGTTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65644607	65639602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_65639775_65644415
ENSMUST00000221044.2	chr12	+	803	4	FSM	ENSMUSG00000097121.3	ENSMUST00000221044.2	803	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.39934634239519	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGTTTGGTTTAGTT	NA	False	NA	NA	False	AATAAA	-13	NA	101050000	101054438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_101050285_101050542_101050759_101052446_101052612_101054300
ENSMUST00000221108.2	chr13	+	1599	1	FSM	ENSMUSG00000021458.18	ENSMUST00000221108.2	1599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCACTCTGGCCTTG	NA	False	NA	26	True	AATAAA	-26	NA	63449086	63450685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_63449100_63450700
ENSMUST00000221129.2	chr12	-	1425	13	FSM	ENSMUSG00000020566.20	ENSMUST00000221129.2	1425	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	6.04841577054135	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTTTCTTGTGTTCT	NA	False	NA	-2	True	AATAAA	-12	NA	17374731	17334725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_17334950_17335113_17335247_17338083_17338182_17341429_17341524_17341628_17341722_17344145_17344215_17344676_17344776_17347729_17347822_17351121_17351217_17358272_17358359_17371598_17371667_17373338_17373512_17374630
ENSMUST00000221166.2	chr12	-	981	7	FSM	ENSMUSG00000020949.10	ENSMUST00000221166.2	981	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3855.04114764032	23136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	65120736	65109197	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116720_65116827_65120588
ENSMUST00000221167.2	chr12	+	2789	12	FSM	ENSMUSG00000021258.11	ENSMUST00000221167.2	2789	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_11	12.5217166726353	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTTATGTGTGAGTACAG	NA	False	NA	24	True	AATAAA	-17	NA	108145837	108169616	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_108146140_108148435_108148468_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334
ENSMUST00000221173.2	chr13	-	1549	5	FSM	ENSMUSG00000069208.10	ENSMUST00000221173.2	1549	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	20.0546129356814	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCCTTGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	74642111	74628175	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968
ENSMUST00000221191.2	chr12	-	511	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221191.2	511	3	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_2	787	11155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATTAGAAGAATTTAAA	NA	False	NA	-17	True	AATAAA	-12	NA	101942186	101934368	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_101934470_101935751_101935894_101941918
ENSMUST00000221205.2	chr12	+	1815	2	FSM	ENSMUSG00000113416.2	ENSMUST00000221205.2	1815	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	631	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCGATATAGCTGTCTCC	NA	False	NA	NA	False	NA	NA	NA	18074067	18077468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_18074184_18075769
ENSMUST00000221300.2	chr13	+	2397	13	FSM	ENSMUSG00000039242.11	ENSMUST00000221300.2	2397	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	59.0322416612782	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGACTCACTTCAAC	NA	False	NA	NA	False	AATAAA	-34	NA	14129258	14173671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477_14171638_14172939
ENSMUST00000221372.2	chr12	+	1840	14	FSM	ENSMUSG00000059669.9	ENSMUST00000221372.2	1840	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	59.0833329855924	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACCTGGAAACTTGCAT	NA	False	NA	12	True	ATTAAA	-21	NA	24548628	24608538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_24548649_24550434_24550534_24554945_24555034_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
ENSMUST00000221374.2	chr12	-	1128	4	FSM	ENSMUSG00000062929.9	ENSMUST00000221374.2	1128	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	123.758725842755	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTTGCCTTGTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	54909583	54907080	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_54908023_54908121_54908199_54908564_54908619_54909528
ENSMUST00000221380.2	chr13	-	1268	9	FSM	ENSMUSG00000003062.14	ENSMUST00000221380.2	1268	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	268.231680408933	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	False	NA	0	True	AATAAA	-19	NA	19579904	19541845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_19542300_19543147_19543207_19551896_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ENSMUST00000221397.2	chr12	-	1241	5	FSM	ENSMUSG00000002804.5	ENSMUST00000221397.2	1241	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	18.0277563773199	2162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATGCGTAACATGAACT	8847	False	NA	NA	False	ATTAAA	-15	NA	112905744	112897910	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_112898671_112901975_112902214_112902414_112902480_112902898_112902943_112905610
ENSMUST00000221411.2	chr12	-	1641	19	FSM	ENSMUSG00000020974.7	ENSMUST00000221411.2	1641	19	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	100.091563019339	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTACACATTGTAGTTT	NA	False	NA	-5	True	AATAAA	-20	NA	69274953	69248546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_69248657_69249680_69249749_69250913_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ENSMUST00000221480.2	chr13	+	582	2	FSM	ENSMUSG00000012429.10	ENSMUST00000221480.2	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATATTTGACATTTCC	NA	False	NA	-61	True	NA	NA	NA	17869776	17871841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_17869944_17871426
ENSMUST00000221489.2	chr12	+	1214	3	FSM	ENSMUSG00000114025.2	ENSMUST00000221489.2	1214	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAATTTAAATGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	17952389	17954676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_17952628_17952966_17953537_17954270
ENSMUST00000221542.2	chr13	+	1560	5	FSM	ENSMUSG00000074867.5	ENSMUST00000221542.2	1560	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	23.2634369773686	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCACACTGGAGAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	62277715	62383958	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_62277843_62351245_62351373_62351567_62351629_62381382_62381444_62382774
ENSMUST00000221637.2	chr13	+	452	3	FSM	ENSMUSG00000113081.2	ENSMUST00000221637.2	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_2	20.5	1497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATTGCAGGTATCTGAA	NA	False	NA	13	True	NA	NA	NA	62411379	62421101	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_62411510_62420579_62420707_62420906
ENSMUST00000221659.2	chr13	-	3551	11	FSM	ENSMUSG00000032999.11	ENSMUST00000221659.2	3551	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	15.0253119767944	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCTACTGACTTCTAAT	NA	False	NA	-13	True	ATTAAA	-18	NA	65353782	65324930	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353752
ENSMUST00000221699.2	chr13	-	1174	3	FSM	ENSMUSG00000015672.5	ENSMUST00000221699.2	1174	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	520.5	5104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGTTGTTGAAAATGTA	NA	False	NA	NA	False	AATAAA	-24	NA	14787610	14784497	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_14785326_14786007_14786190_14787446
ENSMUST00000221710.2	chr12	-	1233	6	FSM	ENSMUSG00000020949.10	ENSMUST00000221710.2	1233	6	0	0	0	0	multi-exon	FALSE	canonical	3	9942	junction_1	352.092828668804	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGCTGTCCTCAGGTCC	NA	False	NA	NA	False	CATAAA	-35	NA	65120736	65109878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
ENSMUST00000221715.2	chr12	+	2367	12	FSM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_1	90.3704039902189	1731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTGTGTATTTTCCTA	4920	False	NA	14	True	AATAAA	-16	NA	110452171	110538122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ENSMUST00000221747.2	chr13	-	2492	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	11.5566238822398	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGAAGAGGTG	9512	False	NA	NA	False	NA	NA	NA	62614646	62600829	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
ENSMUST00000221772.2	chr13	+	1379	3	FSM	ENSMUSG00000074867.5	ENSMUST00000221772.2	1379	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	31.5	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATACTGGAGAGAAGCCT	NA	False	NA	NA	False	NA	NA	NA	62277699	62320072	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_62277843_62317255_62317383_62318963
ENSMUST00000221856.2	chr13	-	1588	5	FSM	ENSMUSG00000113559.2	ENSMUST00000221856.2	1588	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	72.6029441551787	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCACTGTACTCACCACA	NA	False	NA	NA	False	NA	NA	NA	66130595	66124156	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_66125065_66126415_66126651_66126851_66126979_66128413_66128630_66130493
ENSMUST00000221871.2	chr12	-	820	6	FSM	ENSMUSG00000061477.5	ENSMUST00000221871.2	820	6	0	0	0	0	multi-exon	FALSE	canonical	3	10789	junction_4	2615.27425712869	90581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTGTAGTAACTTGT	NA	False	NA	-11	True	AATAAA	-15	NA	28685856	28681082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578
ENSMUST00000221974.2	chr13	+	2439	13	FSM	ENSMUSG00000039242.11	ENSMUST00000221974.2	2439	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	57.9839537190151	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCTGTAGTACCCTGAA	NA	False	NA	NA	False	AATAAA	-30	NA	14129209	14173688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477_14171638_14172963
ENSMUST00000221996.2	chr13	-	2458	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221996.2	2458	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	60.1461183748008	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTCCTGGGAAAAAAC	NA	False	NA	1	True	AATAAA	-20	NA	62832759	62819597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62821755_62823062_62823124_62823332_62823460_62832646
ENSMUST00000222050.2	chr4	-	2017	4	FSM	ENSMUSG00000028389.13	ENSMUST00000222050.2	2017	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	8.48528137423857	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAAATACTGTATTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	62126667	62109225	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_62110927_62122755_62122888_62123260_62123343_62126565
ENSMUST00000222087.4	chr8	-	980	7	FSM	ENSMUSG00000031838.11	ENSMUST00000222087.4	980	7	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_6	19.0065778087482	1200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTTTCCTAGAGTTG	NA	False	NA	-15	True	AATAAA	-18	NA	71219307	71215418	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_71215686_71215772_71215827_71216371_71216525_71217191_71217285_71217363_71217439_71217563_71217747_71219152
ENSMUST00000222156.2	chr13	-	1469	7	FSM	ENSMUSG00000021569.11	ENSMUST00000222156.2	1469	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	185.430729803761	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTATTTTTATTCTAA	NA	False	NA	-20	True	ATTAAA	-14	NA	74069333	74060576	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068568_74069291
ENSMUST00000222166.2	chr12	+	1588	2	FSM	ENSMUSG00000021241.8	ENSMUST00000222166.2	1588	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	15	True	TATAAA	-18	NA	84820050	84821862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_84820146_84820369
ENSMUST00000222228.2	chr12	-	420	3	FSM	ENSMUSG00000061477.5	ENSMUST00000222228.2	420	3	0	0	0	0	multi-exon	FALSE	canonical	3	12102	junction_2	1933	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGGTGTTTCTGAGTT	NA	False	NA	NA	False	NA	NA	NA	28685877	28685173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_28685487_28685578_28685663_28685854
ENSMUST00000222253.2	chr13	+	3242	23	FSM	ENSMUSG00000017756.10	ENSMUST00000222253.2	3242	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_22	160.503604398136	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAAGGGCCCATGACTG	NA	False	NA	NA	False	ATTAAA	-12	NA	73911825	73960477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73960321
ENSMUST00000222291.2	chr12	+	615	5	FSM	ENSMUSG00000021076.7	ENSMUST00000222291.2	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_4	20.5836707124847	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGAGAGATTTAAGCTT	9731	False	NA	NA	False	NA	NA	NA	70984716	70994486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225
ENSMUST00000222305.2	chr13	+	683	4	FSM	ENSMUSG00000063200.5	ENSMUST00000222305.2	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	1402	junction_3	73.1619208787376	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCACATTTCTTTTCT	NA	False	NA	31	True	TATAAA	-31	NA	43554160	43555470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_43554411_43554772_43554895_43554975_43555054_43555237
ENSMUST00000222399.2	chr13	+	2430	16	FSM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_6	38.2023850331654	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCCCGTCCGCTTTGAT	NA	False	NA	28	True	AATAAA	-25	NA	74085929	74109013	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ENSMUST00000222429.2	chr13	-	1653	4	FSM	ENSMUSG00000074865.12	ENSMUST00000222429.2	1653	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	51.4220013439989	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGCATATTTGTGTGT	NA	False	NA	-8	True	ATTAAA	-40	NA	62706421	62634459	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62635805_62640180_62640241_62640621_62640749_62706300
ENSMUST00000222435.2	chr13	+	938	1	FSM	ENSMUSG00000062382.10	ENSMUST00000222435.2	938	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	135203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAGATAA	7962	False	NA	NA	False	NA	NA	NA	74554527	74555465	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_74554500_74555500
ENSMUST00000222436.2	chr13	+	646	3	FSM	ENSMUSG00000005397.9	ENSMUST00000222436.2	646	3	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_1	32	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGGTAGTGGTACATGC	NA	False	NA	NA	False	NA	NA	NA	13683296	13684933	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_13683427_13684017_13684131_13684530
ENSMUST00000222457.2	chr12	-	723	5	FSM	ENSMUSG00000021276.11	ENSMUST00000222457.2	723	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	152.938508885107	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTTGTAGGAGGTTA	3378	False	NA	-19	True	AATAAA	-8	NA	110855550	110841467	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_110841711_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ENSMUST00000222485.2	chr13	+	3906	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	0	0	0	0	multi-exon	TRUE	canonical	3	407	junction_1	134.848435629472	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGTTGTTACCTCAGG	NA	False	NA	NA	False	NA	NA	NA	6598186	6630551	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUST00000222520.2	chr12	+	767	3	FSM	ENSMUSG00000034883.10	ENSMUST00000222520.2	767	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	59	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATATCAATGTCTCAGCA	NA	False	NA	5	True	ATTAAA	-19	NA	69215594	69225779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_69215837_69218635_69218735_69225353
ENSMUST00000222529.2	chr12	-	3181	3	FSM	ENSMUSG00000021248.10	ENSMUST00000222529.2	3181	3	0	0	0	0	multi-exon	FALSE	canonical	3	1293	junction_2	27.5	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGTGTATTTGTCTGT	NA	False	NA	-1	True	AATAAA	-16	NA	85397694	85387387	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_85390324_85390998_85391126_85397576
ENSMUST00000222606.2	chr12	+	2284	12	FSM	ENSMUSG00000042472.12	ENSMUST00000222606.2	2284	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	61.2357590123466	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCACCTCTTTGGCTCTTGT	1861	False	NA	8	True	AATAAA	-13	NA	84363903	84390494	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372376_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ENSMUST00000222614.2	chr13	-	1310	1	FSM	ENSMUSG00000113601.2	ENSMUST00000222614.2	1310	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4568	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAGAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62830315	62829005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62829000_62830300
ENSMUST00000222651.2	chr13	-	1951	14	FSM	ENSMUSG00000038546.10	ENSMUST00000222651.2	1951	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	61.9744173217213	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCCTGCCTTCTTTGT	NA	False	NA	NA	False	AAGAAA	-3	NA	43632383	43556739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43632343
ENSMUST00000222698.2	chr13	+	3082	20	FSM	ENSMUSG00000021314.14	ENSMUST00000222698.2	3082	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.3371329026837	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTACATGGGTTCTTTT	NA	False	NA	10	True	AATAAA	-15	NA	19248986	19335082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_19249077_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305502_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
ENSMUST00000222710.2	chr12	+	521	4	FSM	ENSMUSG00000059669.9	ENSMUST00000222710.2	521	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	107.002596022506	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTTCTGTCTTAGTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	24548609	24559747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_24548649_24550434_24550534_24554945_24555034_24559452
ENSMUST00000222746.2	chr13	-	2206	3	FSM	ENSMUSG00000074865.12	ENSMUST00000222746.2	2206	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	2.5	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGTGTGGACCAGTCA	NA	False	NA	NA	False	NA	NA	NA	62706443	62664608	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62666545_62668231_62668359_62706300
ENSMUST00000222761.2	chr12	+	3355	2	FSM	ENSMUSG00000042029.8	ENSMUST00000222761.2	3355	2	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTGTTTGGTTTCCAT	NA	False	NA	NA	False	NA	NA	NA	116415799	116427351	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_116415987_116424183
ENSMUST00000222793.2	chr12	-	945	4	FSM	ENSMUSG00000002804.5	ENSMUST00000222793.2	945	4	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	7.71722460186015	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCTTGTGTAAGTTTTA	8884	False	NA	-28	True	NA	NA	NA	112905707	112898370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_112898671_112901975_112902480_112902898_112902943_112905610
ENSMUST00000222808.2	chr12	-	403	3	FSM	ENSMUSG00000061477.5	ENSMUST00000222808.2	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	12310	junction_1	2151.5	2288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28683907	28681081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_28681193_28681622_28681774_28683766
ENSMUST00000222812.2	chr12	-	527	2	FSM	ENSMUSG00000113722.2	ENSMUST00000222812.2	527	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGTCTCGTCTACTC	8338	False	NA	NA	False	NA	NA	NA	104998536	104996875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_104997085_104998218
ENSMUST00000222821.2	chr12	+	783	9	FSM	ENSMUSG00000007867.10	ENSMUST00000222821.2	783	9	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_5	10.7637992827812	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTCCATTCTGTCC	NA	False	NA	7	True	AATAAA	-17	NA	86129360	86209233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_86129415_86131867_86131961_86158384_86158450_86185566_86185600_86186825_86186870_86207922_86207996_86208225_86208302_86208760_86208824_86208951
ENSMUST00000222929.2	chr13	+	1055	6	FSM	ENSMUSG00000021458.18	ENSMUST00000222929.2	1055	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	29.9933325924279	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCAGTTTGCTTCTGAA	NA	False	NA	3	True	AATAAA	-17	NA	63387842	63450096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525_63446671_63449592
ENSMUST00000222930.2	chr13	-	512	4	FSM	ENSMUSG00000021606.9	ENSMUST00000222930.2	512	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1139.1816751023	7604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCTTCCTTTCATAAA	NA	False	NA	4	True	AATAAA	-26	NA	73476574	73467985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_73468204_73468412_73468536_73475534_73475589_73476457
ENSMUST00000223033.2	chr13	-	2857	30	FSM	ENSMUSG00000021585.11	ENSMUST00000223033.2	2857	30	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_7	32.8082020428457	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTACTTTCTTAGGAAT	NA	False	NA	NA	False	NA	NA	NA	74918768	74842361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852322_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74918664
ENSMUST00000223041.2	chr6	+	1128	3	FSM	ENSMUSG00000059689.16	ENSMUST00000223041.2	1128	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	10.5	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGTATTTTTCATAATT	NA	False	NA	10	True	AATAAA	-17	NA	117818214	117822916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_+_117818230_117820213_117820354_117821943
ENSMUST00000223101.2	chr13	-	2728	14	FSM	ENSMUSG00000034617.8	ENSMUST00000223101.2	2728	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_10	83.6727918422384	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAAAAGAACT	NA	False	NA	-90	True	NA	NA	NA	68730232	68709481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ENSMUST00000223153.2	chr12	-	405	2	FSM	ENSMUSG00000061477.5	ENSMUST00000223153.2	405	2	0	0	0	0	multi-exon	FALSE	canonical	3	12310	junction_1	0	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28681916	28681081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_28681193_28681622
ENSMUST00000223167.2	chr12	-	1109	3	FSM	ENSMUSG00000020949.10	ENSMUST00000223167.2	1109	3	0	0	0	0	multi-exon	FALSE	canonical	3	9641	junction_1	150.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGACTTATTTATTGT	NA	False	NA	-14	True	AATAAA	-17	NA	65113216	65109209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_65109515_65110451_65110550_65112510
ENSMUST00000223194.2	chr13	+	1398	9	FSM	ENSMUSG00000054021.7	ENSMUST00000223194.2	1398	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	63.0811729044411	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATTTTTTTGTACTTT	NA	False	NA	10	True	ATTAAA	-22	NA	43518981	43548679	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_43519021_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43548212
ENSMUST00000223237.2	chr6	-	1081	2	FSM	ENSMUSG00000048668.17	ENSMUST00000223237.2	1081	2	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGCAGCCTCGTGCCC	3985	False	NA	-12	True	AATAAA	-36	NA	128336320	128334327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_128335157_128336068
ENSMUST00000223247.2	chr13	-	1949	3	FSM	ENSMUSG00000113450.2	ENSMUST00000223247.2	1949	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	14.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGCATATCACAGTTA	9538	False	NA	-4	True	NA	NA	NA	62614620	62601285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_62603008_62604746_62604874_62614520
ENSMUST00000223258.2	chr13	-	597	2	FSM	ENSMUSG00000021215.16	ENSMUST00000223258.2	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTGGACTACTCTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	3968178	3967308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_3967665_3967937
ENSMUST00000223267.2	chr12	+	126	1	FSM	ENSMUSG00000113234.2	ENSMUST00000223267.2	126	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCGGTAGCATAGCCCG	NA	False	NA	NA	False	NA	NA	NA	18043133	18043259	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_18043100_18043300
ENSMUST00000223293.2	chr13	-	757	3	FSM	ENSMUSG00000021606.9	ENSMUST00000223293.2	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	2374	junction_1	41.5	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGAGCCGCTTCGCTGC	NA	False	NA	33	True	CATAAA	-10	NA	73476581	73467956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_73468536_73475534_73475589_73476457
ENSMUST00000223319.2	chr13	+	2501	7	FSM	ENSMUSG00000021532.12	ENSMUST00000223319.2	2501	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	60.5658502971949	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGTGTGTACTCTTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	68730381	68740455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_68730470_68731657_68733122_68733296_68733383_68735778_68735954_68737341_68737509_68738224_68738340_68740049
ENSMUST00000223322.2	chr12	+	1368	7	FSM	ENSMUSG00000020630.10	ENSMUST00000223322.2	1368	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	93.4768242221924	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGAACACATCTAGTTT	NA	False	NA	7	True	AATAAA	-15	NA	28699622	28709582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707635_28707717_28708169_28708295_28708991
ENSMUST00000223407.2	chr12	-	702	4	FSM	ENSMUSG00000021276.11	ENSMUST00000223407.2	702	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	192.582449875372	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTGCTCTTTCTTTTTT	3370	False	NA	-2	True	AATACA	-15	NA	110855558	110845129	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_110845474_110846118_110846249_110850323_110850493_110855499
ENSMUST00000223450.2	chr12	-	2726	4	FSM	ENSMUSG00000062929.9	ENSMUST00000223450.2	2726	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	134.037308239162	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGAGATGTGTTTACT	NA	False	NA	-3	True	AATAAA	-20	NA	54909583	54905593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909528
ENSMUST00000223470.3	chr13	-	1306	3	FSM	ENSMUSG00000113346.3	ENSMUST00000223470.3	1306	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	10.5	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTCCTGAGTTCAAATCC	NA	False	NA	0	True	NA	NA	NA	73495503	73492783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_73493358_73494614_73495181_73495337
ENSMUST00000223558.2	chr14	+	289	2	FSM	ENSMUSG00000039197.11	ENSMUST00000223558.2	289	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATGATGATCCATTTTA	NA	False	NA	4	True	AATAAA	-15	NA	21102678	21103988	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_21102769_21103789
ENSMUST00000223590.2	chr18	+	1530	2	FSM	ENSMUSG00000024603.9	ENSMUST00000223590.2	1530	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTACAAAGTTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	60659285	60661050	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_60659438_60659672
ENSMUST00000223633.2	chr14	+	2438	11	FSM	ENSMUSG00000021957.8	ENSMUST00000223633.2	2438	11	0	0	0	0	multi-exon	FALSE	canonical	3	1855	junction_1	165.575994636904	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30281646	30295581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUST00000223683.2	chr19	+	2398	13	FSM	ENSMUSG00000015176.12	ENSMUST00000223683.2	2398	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	313.587042674491	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTGATTTTCAG	47	False	NA	14	True	ATTAAA	-14	NA	46064470	46072900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUST00000223728.2	chr19	+	3523	13	FSM	ENSMUSG00000015176.12	ENSMUST00000223728.2	3523	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	265.145819419344	2962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCAGAGTTATGTCGT	244	False	NA	13	True	AATAAA	-16	NA	46064408	46073969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUST00000223736.2	chr13	+	5612	24	FSM	ENSMUSG00000021500.18	ENSMUST00000223736.2	5612	24	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	105.360592454409	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCAGATTATCTTT	NA	False	NA	8	True	AATAAA	-15	NA	55782863	55829069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_55782932_55782971_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ENSMUST00000223762.2	chr14	-	2292	5	FSM	ENSMUSG00000033111.17	ENSMUST00000223762.2	2292	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	58.5683361552981	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTCAGAAAAAGCTTTGT	NA	False	NA	-8	True	ATTAAA	-45	NA	10185541	10166639	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184376_10185505
ENSMUST00000223827.2	chr13	+	2632	12	FSM	ENSMUSG00000035762.12	ENSMUST00000223827.2	2632	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	68.3415099589633	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTAATTTATTTGTT	NA	False	NA	21	True	ATTAAA	-22	NA	84370432	84443989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432305_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ENSMUST00000223831.2	chr13	-	2101	5	FSM	ENSMUSG00000021327.20	ENSMUST00000223831.2	2101	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	45.4477722226294	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGGTTCTTACTTGGG	NA	False	NA	2	True	AATAAA	-23	NA	21586901	21571172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21586841
ENSMUST00000223888.2	chr13	-	2313	2	FSM	ENSMUSG00000114407.2	ENSMUST00000223888.2	2313	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1467	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTCTGATAGAACTCTGC	NA	False	NA	NA	False	NA	NA	NA	36373706	36190707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_36192501_36373186
ENSMUST00000223921.2	chr14	-	601	4	FSM	ENSMUSG00000041028.17	ENSMUST00000223921.2	601	4	0	0	0	0	multi-exon	FALSE	canonical	3	5046	junction_1	285.925786797126	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATTAGTCATAGATTTA	NA	False	NA	NA	False	NA	NA	NA	36857229	36853354	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_36853607_36855127_36855228_36855589_36855761_36857151
ENSMUST00000223934.2	chr19	-	3448	24	FSM	ENSMUSG00000024943.10	ENSMUST00000223934.2	3448	24	0	0	0	0	multi-exon	FALSE	canonical	2	185	junction_5	71.1727842464471	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTATTTTTGGAAACCT	NA	False	NA	4	True	AATAAA	-29	NA	23251261	23186086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ENSMUST00000223939.2	chr14	+	2769	4	FSM	ENSMUSG00000025290.18	ENSMUST00000223939.2	2769	4	0	0	0	0	multi-exon	FALSE	canonical	3	9630	junction_1	1522.07774659071	2396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTCCTACACGTCTG	NA	False	NA	4	True	AATAAA	-3	NA	24540796	24545913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450
ENSMUST00000223987.2	chr17	+	1766	4	FSM	ENSMUSG00000037089.12	ENSMUST00000223987.2	1766	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	196.247009885218	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTGGTTGGCATT	NA	False	NA	10	True	ATTAAA	-20	NA	45875130	45878597	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_45875185_45875505_45875700_45875850_45876006_45877234
ENSMUST00000223999.2	chr14	+	525	7	FSM	ENSMUSG00000025290.18	ENSMUST00000223999.2	525	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	5419.3877396088	54641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTCCTACACGTCTG	NA	False	NA	4	True	AATAAA	-3	NA	24540797	24545913	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24544119_24544138_24545497_24545518_24545842
ENSMUST00000224069.2	chr14	+	1818	11	FSM	ENSMUSG00000039197.11	ENSMUST00000224069.2	1818	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	100.003199948802	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGGATTTTTTTTCTGTC	NA	False	NA	9	True	AATAAA	-12	NA	21126219	21498630	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_21126390_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ENSMUST00000224081.2	chr13	+	978	4	FSM	ENSMUSG00000062822.9	ENSMUST00000224081.2	978	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	38.4389848403357	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCAGATCTTGAAATCTA	NA	False	NA	-1	True	AATAAA	-15	NA	119599309	119606361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_119599656_119602609_119602841_119603402_119603493_119606050
ENSMUST00000224116.2	chr13	-	1562	3	FSM	ENSMUSG00000074830.5	ENSMUST00000224116.2	1562	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTATCAATGTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	66821393	66817991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_66819369_66821007_66821069_66821269
ENSMUST00000224150.2	chr13	-	784	6	FSM	ENSMUSG00000021377.16	ENSMUST00000224150.2	784	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	757.290063317881	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTATTTTCTTGTAG	NA	False	NA	NA	False	NA	NA	NA	47251813	47239407	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47246593_47246690_47251630
ENSMUST00000224166.2	chr13	+	340	2	FSM	ENSMUSG00000114893.2	ENSMUST00000224166.2	340	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTATAAACATACATGAGT	NA	False	NA	NA	False	AATAAA	-25	NA	107170791	107171725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_107170837_107171430
ENSMUST00000224182.2	chr13	-	2754	16	FSM	ENSMUSG00000021546.19	ENSMUST00000224182.2	2754	16	0	0	0	0	multi-exon	FALSE	canonical	3	4568	junction_3	976.692573035253	10696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACGTGTGCCCAATTTGA	4751	False	NA	-19	True	AATAAA	-19	NA	58550330	58539048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUST00000224188.2	chr13	+	3464	11	FSM	ENSMUSG00000093930.3	ENSMUST00000224188.2	3464	11	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	180.959553491934	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTTATGCCTGTTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	120151999	120169796	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_120152050_120156524_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ENSMUST00000224196.2	chr14	+	565	2	FSM	ENSMUSG00000012405.17	ENSMUST00000224196.2	565	2	0	0	0	0	multi-exon	FALSE	canonical	3	16172	junction_1	0	5298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATTTCTGCTTAAAGGT	NA	False	NA	-3	True	AATAAA	-12	NA	4199576	4200731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_4199790_4200379
ENSMUST00000224220.2	chr13	+	1204	4	FSM	ENSMUSG00000021486.8	ENSMUST00000224220.2	1204	4	0	0	0	0	multi-exon	FALSE	canonical	3	1299	junction_2	69.7726466620138	2033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTCTGGAGTCAGATAG	5553	False	NA	15	True	NA	NA	NA	55469831	55473082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_55470095_55470665_55470892_55472143_55472419_55472642
ENSMUST00000224241.2	chr13	+	1665	7	FSM	ENSMUSG00000021420.14	ENSMUST00000224241.2	1665	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	90.2744272882538	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36313882	36721567	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_36314017_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ENSMUST00000224276.2	chr14	+	449	2	FSM	ENSMUSG00000114241.2	ENSMUST00000224276.2	449	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGCCTCCATTTTTCTT	1068	False	NA	NA	False	AATAAA	-25	NA	20844306	20846628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_20844529_20846401
ENSMUST00000224284.3	chr18	+	1955	20	FSM	ENSMUSG00000024474.8	ENSMUST00000224284.3	1955	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	168.043095646503	1663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877744	36890688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888478_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ENSMUST00000224286.2	chr14	-	801	3	FSM	ENSMUSG00000049960.5	ENSMUST00000224286.2	801	3	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_2	790	2599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACGGTCCTCTGGCATAG	8678	False	NA	-36	True	AATAAA	-14	NA	20443551	20441294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_20441529_20441960_20442222_20443245
ENSMUST00000224300.2	chr13	+	4250	3	FSM	ENSMUSG00000035840.8	ENSMUST00000224300.2	4250	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	12	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTTGTTGAATATAAT	289	False	NA	27	True	AATAAA	-29	NA	81805781	81820990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_81806056_81813123_81813389_81817279
ENSMUST00000224311.2	chr14	+	1574	9	FSM	ENSMUSG00000021809.11	ENSMUST00000224311.2	1574	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	5.55512151082224	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTGTGAAGGTATATTTT	NA	False	NA	NA	False	NA	NA	NA	20344803	20366830	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_20344861_20350654_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739_20359789_20360702_20360802_20361538_20361694_20366091
ENSMUST00000224313.2	chr14	+	519	1	FSM	ENSMUSG00000021967.5	ENSMUST00000224313.2	519	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1569	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTTGTCTCATACGGAA	NA	False	NA	25	True	ATTAAA	-17	NA	58063886	58064405	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_58063900_58064400
ENSMUST00000224389.2	chr14	-	2444	5	FSM	ENSMUSG00000033111.17	ENSMUST00000224389.2	2444	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	59.4011784394889	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAGGTGTTTAAAGG	NA	False	NA	NA	False	AATAAA	-19	NA	10185509	10166531	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184376_10185429
ENSMUST00000224430.2	chr13	+	450	2	FSM	ENSMUSG00000049517.9	ENSMUST00000224430.2	450	2	0	0	0	0	multi-exon	FALSE	canonical	3	19809	junction_1	0	2101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATATTTTGTGTCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	91072303	91072843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_91072566_91072655
ENSMUST00000224463.2	chr13	+	658	4	FSM	ENSMUSG00000049517.9	ENSMUST00000224463.2	658	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	9398.7280108652	37142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAATATTTTGTGTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	91071335	91072842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_91071526_91071705_91071866_91072444_91072566_91072655
ENSMUST00000224467.3	chr18	+	1910	10	FSM	ENSMUSG00000034391.13	ENSMUST00000224467.3	1910	10	0	0	0	0	multi-exon	FALSE	canonical	3	723	junction_3	71.0602248487546	3314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGGTGTCTTATTT	800	False	NA	26	True	AATAAA	-15	NA	84952906	84999598	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
ENSMUST00000224478.2	chr19	+	2194	14	FSM	ENSMUSG00000025217.16	ENSMUST00000224478.2	2194	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	166.945691484762	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45433946	45517732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_45434127_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUST00000224487.2	chr13	-	533	2	FSM	ENSMUSG00000001707.9	ENSMUST00000224487.2	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	1400	junction_1	0	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTAACAAGAGCAT	NA	False	NA	NA	False	AATAAA	-20	NA	38842986	38839787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_38840217_38842882
ENSMUST00000224496.2	chr13	-	504	3	FSM	ENSMUSG00000055560.9	ENSMUST00000224496.2	504	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	2.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCATGGCTCTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	67569527	67561012	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_67561323_67561952_67562080_67569460
ENSMUST00000224497.2	chr17	+	4141	27	FSM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_22	18.327114778237	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATGATCAAGTATGAGA	NA	False	NA	28	True	ATTAAA	-23	NA	66430607	66459169	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ENSMUST00000224536.2	chr13	-	570	2	FSM	ENSMUSG00000114689.2	ENSMUST00000224536.2	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCTCCATCTTTGAACA	NA	False	NA	-6	True	ATTAAA	-23	NA	98853018	98849581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_98850076_98852942
ENSMUST00000224565.2	chr13	+	725	1	FSM	ENSMUSG00000114825.2	ENSMUST00000224565.2	725	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAGAACAACAATGACAC	NA	False	NA	NA	False	NA	NA	NA	66546589	66547314	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_66546600_66547300
ENSMUST00000224568.2	chr14	+	714	6	FSM	ENSMUSG00000025290.18	ENSMUST00000224568.2	714	6	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_1	4812.24305288085	7028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTGAGAGGACAAATAAA	NA	False	NA	-18	True	NA	NA	NA	24540834	24545891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_24541093_24541817_24541884_24541974_24542185_24543450_24543562_24545497_24545518_24545842
ENSMUST00000224611.2	chr13	+	1750	8	FSM	ENSMUSG00000021420.14	ENSMUST00000224611.2	1750	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	107.637524751798	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCATTTGTCTTTTATT	NA	False	NA	13	True	AATAAA	-24	NA	36301857	36721571	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_36301989_36332343_36332428_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ENSMUST00000224633.2	chr14	+	557	2	FSM	ENSMUSG00000063787.5	ENSMUST00000224633.2	557	2	0	0	0	0	multi-exon	FALSE	canonical	3	2056	junction_1	0	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGTTGGCCATTTCTT	NA	False	NA	27	True	AATAAA	-10	NA	20753218	20754487	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_20753477_20754188
ENSMUST00000224643.2	chr13	+	1568	3	FSM	ENSMUSG00000114777.2	ENSMUST00000224643.2	1568	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATCAATGTGGTAAAGC	NA	False	NA	NA	False	NA	NA	NA	66674042	66677408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_66674179_66674378_66674431_66676028
ENSMUST00000224698.2	chr14	-	1985	18	FSM	ENSMUSG00000022040.9	ENSMUST00000224698.2	1985	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	50.8642946534033	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTGTGTTCTTGAGA	NA	False	NA	-2	True	AATAAA	-19	NA	66349835	66321822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66349637
ENSMUST00000224707.2	chr19	-	1255	7	FSM	ENSMUSG00000024889.6	ENSMUST00000224707.2	1255	7	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_6	96.5361187443447	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGGAACCTTGGGAC	NA	False	NA	-9	True	ATTAAA	-21	NA	4675361	4672618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675121_4675220
ENSMUST00000224726.3	chr19	+	4061	21	FSM	ENSMUSG00000024892.18	ENSMUST00000224726.3	4061	21	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_8	10.9748576300561	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGTCATGTACAGTCTAC	1701	False	NA	10	True	AATAAA	-25	NA	4560513	4671707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4560610_4565681_4565719_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ENSMUST00000224897.2	chr19	-	2168	11	FSM	ENSMUSG00000024982.11	ENSMUST00000224897.2	2168	11	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_6	59.8815497461447	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATTGTTTTTAGTT	7439	False	NA	-7	True	AATAAA	-38	NA	55304464	55286732	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ENSMUST00000224905.2	chr17	+	1906	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_3	17.6823829464998	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTTTTGGTTGGCAT	NA	False	NA	9	True	ATTAAA	-19	NA	45874799	45878596	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
ENSMUST00000224917.2	chr13	-	464	4	FSM	ENSMUSG00000114353.2	ENSMUST00000224917.2	464	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	5.73488351136175	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATACTGGAGAGAAACCTT	NA	False	NA	NA	False	NA	NA	NA	66950624	66941415	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_66941596_66942701_66942763_66942962_66943090_66950528
ENSMUST00000224947.2	chr17	+	2016	14	FSM	ENSMUSG00000019487.12	ENSMUST00000224947.2	2016	14	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_12	68.855048845232	512	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTGGAGTCTGCACCGC	NA	False	NA	13	True	ATTAAA	-23	NA	57556454	57570427	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569353_57569473_57569999
ENSMUST00000224975.2	chr14	-	2727	13	FSM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_12	241.43268845696	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTTTTGACCTAGAGTA	8200	False	NA	-1	True	AATAAA	-24	NA	20529979	20505344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
ENSMUST00000224981.2	chr14	+	3618	10	FSM	ENSMUSG00000021895.11	ENSMUST00000224981.2	3618	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	14.3716112484489	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTCCTGTGTACAG	NA	False	NA	NA	False	AATAAA	-15	NA	27058022	27125868	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_27058227_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ENSMUST00000225023.2	chr14	+	1613	5	FSM	ENSMUSG00000025290.18	ENSMUST00000225023.2	1613	5	0	0	0	0	multi-exon	FALSE	canonical	3	4092	junction_4	3560.754932244	117274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCTTGGGACTGGAGAG	NA	False	NA	NA	False	AATAAA	-20	NA	24540785	24547027	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545842
ENSMUST00000225035.2	chr13	-	571	4	FSM	ENSMUSG00000021764.9	ENSMUST00000225035.2	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	707.770364517256	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	-18	True	AATAAA	-19	NA	114524599	114425183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114524494
ENSMUST00000225080.2	chr17	-	2412	10	FSM	ENSMUSG00000012296.17	ENSMUST00000225080.2	2412	10	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_7	91.006850915633	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5833	False	NA	-33	True	AATAAA	-15	NA	46593925	46568802	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
ENSMUST00000225141.2	chr19	+	1209	10	FSM	ENSMUSG00000024911.8	ENSMUST00000225141.2	1209	10	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_5	12.1837779216647	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGTCCTTGTTCCAGG	NA	False	NA	17	True	AATAAA	-17	NA	5510643	5515079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
ENSMUST00000225186.2	chr13	+	2627	14	FSM	ENSMUSG00000062822.9	ENSMUST00000225186.2	2627	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	45.7272593593877	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTCATTTCTTACATCA	NA	False	NA	12	True	AATAAA	-22	NA	119599307	119622656	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_119599656_119601100_119601227_119602609_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ENSMUST00000225251.2	chr14	-	2192	11	FSM	ENSMUSG00000022052.10	ENSMUST00000225251.2	2192	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	291.951776839943	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAATCTGGTTTTCTTT	NA	False	NA	-5	True	AATAAA	-13	NA	67309631	67253122	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67299885_67299948_67307683_67307759_67309538
ENSMUST00000225263.2	chr13	+	165	2	FSM	ENSMUSG00000114458.2	ENSMUST00000225263.2	165	2	0	0	0	0	multi-exon	TRUE	canonical	1	49	junction_1	0	43707	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAGAGAGTAAAAC	NA	False	NA	NA	False	NA	NA	NA	98937679	98940244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_98937719_98940118
ENSMUST00000225294.2	chr14	-	1191	5	FSM	ENSMUSG00000033111.17	ENSMUST00000225294.2	1191	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	54.4196655631032	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGCCCTCTTGAGTCTC	NA	False	NA	-8	True	AATAAA	-18	NA	10185505	10167783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185429
ENSMUST00000225342.2	chr17	+	3354	12	FSM	ENSMUSG00000002833.12	ENSMUST00000225342.2	3354	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	250.971138573132	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAAAGAAACAGCTTT	NA	False	NA	NA	False	TATAAA	-10	NA	56388423	56407592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_56388717_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404164_56404234_56404527_56404881_56404986_56405483_56406076_56406176_56406388_56406858_56406986_56407347
ENSMUST00000225355.2	chr14	-	2771	15	FSM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_14	90.9467493893531	1213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	3467	False	NA	NA	False	AATAAA	-16	NA	65830501	65767897	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830430
ENSMUST00000225361.2	chr14	+	1609	11	FSM	ENSMUSG00000000365.10	ENSMUST00000225361.2	1609	11	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_4	33.16700167335	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCCTGCCTCTTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	56640156	56679370	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987
ENSMUST00000225401.2	chr14	+	951	9	FSM	ENSMUSG00000053453.10	ENSMUST00000225401.2	951	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	279.504472236134	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508547	8520749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_8508579_8512131_8512210_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUST00000225410.2	chr13	-	974	6	FSM	ENSMUSG00000060739.9	ENSMUST00000225410.2	974	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	355.64420422664	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGGCATAACGGTTTA	NA	False	NA	NA	False	AATAAA	-28	NA	97274360	97267491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_97267737_97268350_97268463_97270046_97270227_97271801_97271953_97272028_97272217_97274262
ENSMUST00000225476.2	chr19	-	1455	8	FSM	ENSMUSG00000024889.6	ENSMUST00000225476.2	1455	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	109.573011722592	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGGAACCTTGGGAC	NA	False	NA	-9	True	ATTAAA	-21	NA	4675669	4672618	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674687_4674792_4675040_4675125_4675220_4675324_4675460
ENSMUST00000225490.2	chr13	+	1771	6	FSM	ENSMUSG00000035958.4	ENSMUST00000225490.2	1771	6	0	0	0	0	multi-exon	FALSE	canonical	3	768	junction_4	61.475198251002	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGACTTTTTTCTTCAT	NA	False	NA	20	True	AATAAA	-20	NA	25015926	25026135	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ENSMUST00000225501.2	chr14	-	1087	6	FSM	ENSMUSG00000060548.14	ENSMUST00000225501.2	1087	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	31.301118190889	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACATTTCCATCCTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	61213334	61203799	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61213159
ENSMUST00000225542.2	chr13	-	1153	3	FSM	ENSMUSG00000114839.2	ENSMUST00000225542.2	1153	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGTCCAAAGACATAAAGG	NA	False	NA	NA	False	NA	NA	NA	66889377	66886434	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_66887397_66888983_66889042_66889244
ENSMUST00000225585.2	chr16	+	1705	2	FSM	ENSMUSG00000079737.5	ENSMUST00000225585.2	1705	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTACTTTGGTATCTTAA	NA	False	NA	NA	False	AATAAA	-1	NA	13489792	13496252	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_13489943_13494697
ENSMUST00000225600.2	chr13	+	3003	17	FSM	ENSMUSG00000035493.11	ENSMUST00000225600.2	3003	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	15.8290427300579	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCAGTGTCTTCGGTTTT	9362	False	NA	NA	False	NA	NA	NA	56757335	56787375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_56757594_56762052_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56784482_56784928_56785031_56785833_56785859_56786529
ENSMUST00000225605.2	chr13	+	1539	4	FSM	ENSMUSG00000071252.7	ENSMUST00000225605.2	1539	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	17.5562587763516	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACAATGTTTTTTCATT	NA	False	NA	NA	False	AATAAA	-20	NA	77283672	77341833	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_77283750_77322971_77323104_77331719_77331889_77340672
ENSMUST00000225612.2	chr14	+	550	6	FSM	ENSMUSG00000021774.14	ENSMUST00000225612.2	550	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	122.433002086856	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGGACCAAGAGATACGC	NA	False	NA	NA	False	NA	NA	NA	4137951	4186327	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_4138010_4138657_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
ENSMUST00000225653.2	chr14	-	2765	18	FSM	ENSMUSG00000033885.16	ENSMUST00000225653.2	2765	18	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	21.2781870861862	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGTTGTAGCTTTGC	NA	False	NA	-6	True	AATAAA	-11	NA	14371518	14304661	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_14305839_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
ENSMUST00000225674.2	chr13	-	2704	16	FSM	ENSMUSG00000021546.19	ENSMUST00000225674.2	2704	16	0	0	0	0	multi-exon	FALSE	canonical	3	1429	junction_15	1661.36162897252	4414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5126	False	NA	-23	True	AATAAA	-15	NA	58549955	58539052	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ENSMUST00000225703.2	chr13	-	1234	3	FSM	ENSMUSG00000021495.11	ENSMUST00000225703.2	1234	3	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	5.5	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTATGATGGTGATTTG	NA	False	NA	-4	True	GATAAA	-19	NA	55691133	55687128	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_55687526_55689436_55689535_55690394
ENSMUST00000225707.2	chr13	-	686	6	FSM	ENSMUSG00000021764.9	ENSMUST00000225707.2	686	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	793.529986830996	9077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	-18	True	AATAAA	-19	NA	114524585	114425183	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114523943_114523994_114524494
ENSMUST00000225726.2	chr13	+	2795	13	FSM	ENSMUSG00000062822.9	ENSMUST00000225726.2	2795	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	37.4584955502605	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599311	119622653	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610731_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ENSMUST00000225815.2	chr13	+	2447	4	FSM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	162.181653983701	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGTGAAAGAATGTT	NA	False	NA	16	True	AATAAA	-29	NA	58550513	58557906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_58550604_58552384_58552470_58554815_58554905_58555723
ENSMUST00000225850.2	chr13	-	1918	3	FSM	ENSMUSG00000044792.8	ENSMUST00000225850.2	1918	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	208.5	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGTTCCTTTTCTTGTT	NA	False	NA	1	True	ATTAAA	-21	NA	59917602	59903224	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_59904818_59910449_59910610_59917437
ENSMUST00000225857.2	chr14	+	1962	14	FSM	ENSMUSG00000021957.8	ENSMUST00000225857.2	1962	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	577.508113624194	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30279565	30295581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_30279651_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUST00000225968.2	chr19	+	1561	10	FSM	ENSMUSG00000025157.9	ENSMUST00000225968.2	1561	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	175.05477097042	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	8317	False	NA	9	True	AATAAA	-15	NA	41926106	41932534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_41926290_41926461_41926657_41926802_41926892_41927158_41927276_41928038_41928173_41928295_41928344_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ENSMUST00000225972.2	chr13	+	2097	3	FSM	ENSMUSG00000071180.6	ENSMUST00000225972.2	2097	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	82	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCCTGAGTTTTTGTCT	NA	False	NA	NA	False	AATAAA	-44	NA	108181022	108185706	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_108181243_108182958_108183103_108183973
ENSMUST00000225990.2	chr13	-	1159	11	FSM	ENSMUSG00000069089.9	ENSMUST00000225990.2	1159	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_6	227.413741889095	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGATTTATGATTAGAG	NA	False	NA	-29	True	AATAAA	-3	NA	100867408	100839817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ENSMUST00000225992.2	chr13	+	616	3	FSM	ENSMUSG00000071252.7	ENSMUST00000225992.2	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	11	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGAGTGACTTACACTGT	NA	False	NA	NA	False	AATAAA	-17	NA	77283669	77332123	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_77283750_77322971_77323104_77331719
ENSMUST00000226053.2	chr17	+	2270	16	FSM	ENSMUSG00000002833.12	ENSMUST00000226053.2	2270	16	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_6	104.875926694356	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAAAGAAACAGCTTT	NA	False	NA	NA	False	TATAAA	-10	NA	56386633	56407592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ENSMUST00000226069.2	chr19	+	1599	4	FSM	ENSMUSG00000024983.11	ENSMUST00000226069.2	1599	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	51.1620519091597	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATCATGCATCTTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	55304758	55355935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55354724
ENSMUST00000226072.2	chr14	-	578	3	Antisense	novelGene_ENSMUSG00000063787.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTAGGCTCCGCGGCGCCGT	NA	False	NA	NA	False	NA	NA	NA	20754493	20753125	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Antisense_chr14_-_20753266_20753343_20753477_20754188
ENSMUST00000226086.2	chr17	+	850	4	FSM	ENSMUSG00000037089.12	ENSMUST00000226086.2	850	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	186.912338335976	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGCCAGCTCTAATGG	NA	False	NA	7	True	AATAAA	-16	NA	45874885	45876981	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45876589
ENSMUST00000226100.2	chr13	+	1476	8	FSM	ENSMUSG00000021661.17	ENSMUST00000226100.2	1476	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	57.4651624722247	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGATTATATGCTTGTC	NA	False	NA	14	True	AATAAA	-24	NA	98399646	98410426	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_98399985_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
ENSMUST00000226168.2	chr14	+	828	5	FSM	ENSMUSG00000022210.8	ENSMUST00000226168.2	828	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	5.40254569624358	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTAGTCTCTGGGTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	55716331	55725034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724621_55724716
ENSMUST00000226290.2	chr14	-	1241	2	FSM	ENSMUSG00000021917.17	ENSMUST00000226290.2	1241	2	0	0	0	0	multi-exon	FALSE	canonical	3	1787	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACATTTGTTTTCTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	30723326	30721784	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_30722861_30723161
ENSMUST00000226299.2	chr14	-	3729	11	FSM	ENSMUSG00000037526.8	ENSMUST00000226299.2	3729	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	42.721072083926	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGTGTGTCTGTC	NA	False	NA	-4	True	AATAAA	-14	NA	47808106	47778349	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47808025
ENSMUST00000226352.2	chr14	+	2784	11	FSM	ENSMUSG00000040618.8	ENSMUST00000226352.2	2784	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	479.473419492676	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGCAGTTGGAAGAATGG	9014	False	NA	4	True	NA	NA	NA	55777845	55787281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761_55786112_55786411
ENSMUST00000226363.2	chr15	-	2917	4	FSM	ENSMUSG00000037465.11	ENSMUST00000226363.2	2917	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1037.5311508041	2498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACAGTGAGTCTGTTGT	1378	False	NA	-10	True	AATAAA	-15	NA	38299326	38294659	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_38296409_38296858_38297772_38297865_38298097_38299302
ENSMUST00000226437.2	chr15	+	1662	6	FSM	ENSMUSG00000022257.5	ENSMUST00000226437.2	1662	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	166.723003811712	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACAGTCGTGGCTCC	111	False	NA	NA	False	ATTAAA	-15	NA	34238294	34284441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_34238569_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277674_34283445
ENSMUST00000226551.2	chr14	+	4098	14	FSM	ENSMUSG00000021918.11	ENSMUST00000226551.2	4098	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	14.1684707054141	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTGTGTGTATGGTGT	NA	False	NA	24	True	AGTAAA	-15	NA	30673333	30710775	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ENSMUST00000226555.2	chr15	-	2730	11	FSM	ENSMUSG00000022329.16	ENSMUST00000226555.2	2730	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	83.3220258995183	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTTGTTGTTATTGT	NA	False	NA	2	True	AATAAA	-21	NA	35179067	34875641	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35178971
ENSMUST00000226579.2	chr15	+	4568	29	FSM	ENSMUSG00000037646.11	ENSMUST00000226579.2	4568	29	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_28	14.7713871234566	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCTGTTGCTGTCTCTG	166	False	NA	NA	False	AATAAA	-13	NA	35371711	35643098	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35642991
ENSMUST00000226649.2	chr15	-	2209	4	FSM	ENSMUSG00000022360.9	ENSMUST00000226649.2	2209	4	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_3	7.84573486395988	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTCTAGTTCTTGTGT	NA	False	NA	-9	True	AATAAA	-22	NA	57962172	57957439	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754
ENSMUST00000226659.2	chr14	-	1730	5	FSM	ENSMUSG00000002329.8	ENSMUST00000226659.2	1730	5	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_3	25.3673017879316	2297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAAGACAATTTTC	2342	False	NA	-23	True	AATAAA	-14	NA	55897908	55895350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897686_55897794
ENSMUST00000226664.2	chr14	+	2631	8	FSM	ENSMUSG00000040618.8	ENSMUST00000226664.2	2631	8	0	0	0	0	multi-exon	FALSE	canonical	3	1491	junction_4	101.915130758642	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCTGTGTCTGCATAG	9038	False	NA	31	True	NA	NA	NA	55777869	55786391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUST00000226722.2	chr14	-	935	5	FSM	ENSMUSG00000022108.9	ENSMUST00000226722.2	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_1	98.2776678599976	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACCTTTCTTTTTTCTA	NA	False	NA	-19	True	ATTAAA	-25	NA	73605945	73600324	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738
ENSMUST00000226740.2	chr14	-	1765	15	FSM	ENSMUSG00000042354.8	ENSMUST00000226740.2	1765	15	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	235.33125806065	3757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30740975	30734389	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738350_30738769_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ENSMUST00000226746.2	chr14	-	501	3	FSM	ENSMUSG00000022223.10	ENSMUST00000226746.2	501	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	40.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGTACGGGTCCTAGT	NA	False	NA	NA	False	NA	NA	NA	56137668	56136390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_56136763_56137270_56137378_56137646
ENSMUST00000226751.2	chr14	-	381	1	FSM	ENSMUSG00000115194.2	ENSMUST00000226751.2	381	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	689	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTTGATCCAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	48933438	48933057	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_48933100_48933400
ENSMUST00000226753.2	chr14	-	2126	11	FSM	ENSMUSG00000000958.11	ENSMUST00000226753.2	2126	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	53.6977653166312	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGTGGCTTTATTCT	NA	False	NA	-4	True	AATAAA	-17	NA	54655136	54606898	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654228_54655113
ENSMUST00000226768.2	chr14	-	2366	4	FSM	ENSMUSG00000006288.9	ENSMUST00000226768.2	2366	4	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_3	1.69967317119759	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGAGAGCTGCTGGTCG	NA	False	NA	-1	True	AATAAA	-18	NA	51022952	51012906	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_51014870_51015213_51015426_51018931_51019065_51022894
ENSMUST00000226770.2	chr14	+	2417	9	FSM	ENSMUSG00000040618.8	ENSMUST00000226770.2	2417	9	0	0	0	0	multi-exon	FALSE	canonical	3	1491	junction_4	96.0676031500734	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGGACTCCCCATGCT	9031	False	NA	27	True	ATTAAA	-24	NA	55777862	55786329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUST00000226782.2	chr14	-	949	4	FSM	ENSMUSG00000021917.17	ENSMUST00000226782.2	949	4	0	0	0	0	multi-exon	FALSE	canonical	3	1717	junction_2	34.7658836600865	6867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACATTTGTTTTCTTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	30723566	30721782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
ENSMUST00000226816.2	chr15	-	1186	3	FSM	ENSMUSG00000054277.9	ENSMUST00000226816.2	1186	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	31.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGGTTGCCTGTGTTGTC	NA	False	NA	-27	True	AATATA	-15	NA	83189542	83183940	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83184904_83187303_83187426_83189441
ENSMUST00000226817.2	chr14	+	2234	12	FSM	ENSMUSG00000052395.18	ENSMUST00000226817.2	2234	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	15.4181389364755	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTTCCCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	30376363	30413274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398858_30399643_30399775_30401187_30401333_30411661_30411912_30412398
ENSMUST00000226827.2	chr15	+	558	5	FSM	ENSMUSG00000022338.9	ENSMUST00000226827.2	558	5	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	272.243457221657	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAATTTTTTTATTTTG	9616	False	NA	13	True	AATAAA	-15	NA	44291487	44299263	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_44291567_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ENSMUST00000226833.2	chr14	+	1252	5	FSM	ENSMUSG00000021918.11	ENSMUST00000226833.2	1252	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	6.25999201277446	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGCTCAGTGATTAAG	NA	False	NA	NA	False	NA	NA	NA	30673434	30681535	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097
ENSMUST00000226862.2	chr1	-	340	2	FSM	ENSMUSG00000097416.4	ENSMUST00000226862.2	340	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTTAGCACCATTTT	NA	False	NA	NA	False	NA	NA	NA	191722099	191718792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_-_191718987_191721953
ENSMUST00000226955.2	chr15	+	1094	4	FSM	ENSMUSG00000022359.11	ENSMUST00000226955.2	1094	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	30.2103734943259	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCTGTGCCCTTTTTT	2694	False	NA	38	True	AATAAA	-28	NA	58004806	58022061	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_58004978_58011729_58011838_58014001_58014053_58021297
ENSMUST00000227076.2	chr14	-	865	5	FSM	ENSMUSG00000052584.11	ENSMUST00000227076.2	865	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	35.7587401903367	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATACCATGTGCGAGTTA	NA	False	NA	-4	True	AATAAA	-16	NA	76794298	76770255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_76770687_76777345_76777495_76787421_76787495_76793870_76793989_76794204
ENSMUST00000227139.2	chr14	-	867	5	FSM	ENSMUSG00000022223.10	ENSMUST00000227139.2	867	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_3	15.0499169432924	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACACATTGGTGACCTGG	NA	False	NA	NA	False	NA	NA	NA	56137685	56135366	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270
ENSMUST00000227142.2	chr15	+	786	6	FSM	ENSMUSG00000022359.11	ENSMUST00000227142.2	786	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	23.3203773554375	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATATTGTTTGTTTGTT	2691	False	NA	NA	False	CATAAA	-13	NA	58004803	58018721	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58015992_58016142_58016975_58017101_58018534
ENSMUST00000227173.2	chr15	+	1122	8	FSM	ENSMUSG00000059586.11	ENSMUST00000227173.2	1122	8	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	348.219025608766	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATCCTCAGCTCAGCA	NA	False	NA	4	True	AATAAA	-5	NA	59246133	59473521	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59368625_59368704_59463545_59463647_59463986_59464094_59473188
ENSMUST00000227211.2	chr14	-	543	5	FSM	ENSMUSG00000022223.10	ENSMUST00000227211.2	543	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	76.1265393933023	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTTCCGCTGTCTC	NA	False	NA	-6	True	AATAAA	-20	NA	56137312	56134739	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_56134892_56135699_56135844_56136640_56136763_56137103_56137187_56137270
ENSMUST00000227242.2	chr14	-	2617	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	0	0	0	0	multi-exon	FALSE	canonical	3	1744	junction_2	852.637149891441	8786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAGAAGCTGGTGTGT	8748	False	NA	-38	True	AATAAA	-19	NA	52341462	52311001	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUST00000227257.2	chr14	-	622	3	FSM	ENSMUSG00000022193.8	ENSMUST00000227257.2	622	3	0	0	0	0	multi-exon	FALSE	canonical	2	118	junction_1	868	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGGAGTCCACAGTTA	8638	False	NA	-19	True	AATAAA	-16	NA	54855465	54851577	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_54851939_54854232_54854279_54855250
ENSMUST00000227368.2	chr15	+	1825	4	FSM	ENSMUSG00000022303.10	ENSMUST00000227368.2	1825	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	9.0921211313239	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGCCTTGATCATGTGA	NA	False	NA	6	True	NA	NA	NA	39609327	39624330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_39609364_39617579_39618622_39622877_39623019_39623724
ENSMUST00000227371.2	chr15	-	1130	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	79.3823378060608	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGCATTATTCAGCAATA	NA	False	NA	NA	False	NA	NA	NA	8128693	8121710	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
ENSMUST00000227410.2	chr14	+	2544	9	FSM	ENSMUSG00000036291.7	ENSMUST00000227410.2	2544	9	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_2	33.1200467994838	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGTGGGTATCATT	NA	False	NA	NA	False	AATAAA	-42	NA	49303987	49324822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_49304322_49311005_49311200_49311426_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ENSMUST00000227463.2	chr15	+	556	4	FSM	ENSMUSG00000041841.9	ENSMUST00000227463.2	556	4	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_1	9620.00361515294	26498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTGTGGTGATCTAAG	2304	False	NA	34	True	AATAAA	-15	NA	5146182	5148157	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_5146409_5146768_5146905_5147100_5147186_5148048
ENSMUST00000227478.2	chr15	+	2084	13	FSM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_11	40.4687808343941	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATACATATA	7144	False	NA	12	True	NA	NA	NA	76361644	76385172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ENSMUST00000227494.2	chr10	-	553	2	FSM	ENSMUSG00000047146.18	ENSMUST00000227494.2	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAAGCAATTAATTAAAAGA	NA	False	NA	-19	True	NA	NA	NA	62728765	62715651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_62715913_62728473
ENSMUST00000227536.2	chr14	-	1301	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	0	0	0	0	multi-exon	FALSE	canonical	3	1725	junction_7	903.44372897739	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8784	False	NA	42	True	AATAAA	-18	NA	52341426	52312255	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ENSMUST00000227540.2	chr15	-	1819	10	FSM	ENSMUSG00000050891.11	ENSMUST00000227540.2	1819	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	38.5140666943045	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGAGTTATCCTTGA	NA	False	NA	-3	True	AATAAA	-16	NA	58805587	58771779	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58792988_58793032_58793122_58793267_58798284_58798335_58800532_58800599_58805527
ENSMUST00000227635.2	chr15	+	925	3	FSM	ENSMUSG00000041841.9	ENSMUST00000227635.2	925	3	0	0	0	0	multi-exon	FALSE	canonical	3	15185	junction_2	4434.5	26205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGGTGATCTAAGGT	2297	False	NA	36	True	AATAAA	-17	NA	5146175	5148159	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_5146905_5147100_5147186_5148048
ENSMUST00000227725.2	chr15	-	2618	19	FSM	ENSMUSG00000022350.8	ENSMUST00000227725.2	2618	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	115.6451575689	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	-3	True	AGTAAA	-16	NA	59224378	59203845	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224138
ENSMUST00000227729.2	chr17	+	656	5	FSM	ENSMUSG00000045257.11	ENSMUST00000227729.2	656	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	10.1242283656583	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTGAATTATGTATTG	NA	False	NA	15	True	AATAAA	-18	NA	80597631	80604905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_80597767_80599753_80599808_80601898_80602006_80602941_80603079_80604682
ENSMUST00000227735.2	chr15	-	1136	2	FSM	ENSMUSG00000022280.10	ENSMUST00000227735.2	1136	2	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGTTTTTATATTGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	36283280	36265264	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_36266178_36283057
ENSMUST00000227751.2	chr14	-	497	3	FSM	ENSMUSG00000006288.9	ENSMUST00000227751.2	497	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	453.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTCCCCTGCCCTGG	NA	False	NA	NA	False	AATGAA	-41	NA	51009763	51003301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_51003480_51004599_51004728_51009572
ENSMUST00000227806.2	chr2	-	944	3	FSM	ENSMUSG00000115423.3	ENSMUST00000227806.2	944	3	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_1	8.5	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGCTGCCTTCACAAGT	NA	False	NA	NA	False	AATAAA	-21	NA	136733309	136723190	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_136723560_136727392_136727621_136732962
ENSMUST00000227815.2	chr14	+	1270	4	FSM	ENSMUSG00000022111.10	ENSMUST00000227815.2	1270	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2159.4787951417	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTTTTAGAACCATTCT	90	False	NA	NA	False	AGTAAA	-14	NA	101891402	101905258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427
ENSMUST00000227852.2	chr14	-	692	2	FSM	ENSMUSG00000021891.9	ENSMUST00000227852.2	692	2	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGGGAGCCTTCCTAG	NA	False	NA	NA	False	NA	NA	NA	31216989	31215360	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_31215922_31216858
ENSMUST00000228002.2	chr15	-	3315	10	FSM	ENSMUSG00000009035.16	ENSMUST00000228002.2	3315	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	128.214615603374	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGATTGTATTGAAATCTC	NA	False	NA	-23	True	AATAAA	-30	NA	79287456	79244903	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79247086_79247857_79247879_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ENSMUST00000228009.2	chr14	-	2643	16	FSM	ENSMUSG00000022099.18	ENSMUST00000228009.2	2643	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.6226655303828	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGTTTCTATCCATGC	NA	False	NA	0	True	ATTAAA	-22	NA	70867594	70841109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_70842295_70842407_70842489_70842980_70842989_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178_70864309_70867456
ENSMUST00000228029.2	chr15	-	2279	12	FSM	ENSMUSG00000037487.8	ENSMUST00000228029.2	2279	12	0	0	0	0	multi-exon	FALSE	canonical	3	678	junction_11	97.6085113481571	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTTATGGTGTTATTT	400	False	NA	-5	True	AATAAA	-31	NA	37984611	37968102	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190
ENSMUST00000228130.2	chr15	+	654	6	FSM	ENSMUSG00000022338.9	ENSMUST00000228130.2	654	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	414.684747730128	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTCTGTTTATTACTG	9651	False	NA	40	True	AATAAA	-42	NA	44291522	44299290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_44291567_44292955_44293033_44294086_44294191_44295833_44295905_44297294_44297370_44299007
ENSMUST00000228141.2	chr14	+	2103	6	FSM	ENSMUSG00000022109.7	ENSMUST00000228141.2	2103	6	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_5	13.5735036007657	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTCACAATTAAGTCTCT	NA	False	NA	NA	False	AATAAA	-17	NA	73747477	73756289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754779_73755333
ENSMUST00000228177.2	chr15	-	3156	8	FSM	ENSMUSG00000022195.8	ENSMUST00000228177.2	3156	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	133.553321920192	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAAATTAAATCCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	12824697	12808731	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818214_12821489_12821640_12824552
ENSMUST00000228221.2	chr17	-	413	2	FSM	ENSMUSG00000046991.13	ENSMUST00000228221.2	413	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTCTCAGTTCAGTTG	NA	False	NA	NA	False	NA	NA	NA	15163339	15159572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_15159843_15163196
ENSMUST00000228224.2	chr15	+	1019	1	FSM	ENSMUSG00000115040.2	ENSMUST00000228224.2	1019	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTGAGTGCCAAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35733749	35734768	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_35733700_35734800
ENSMUST00000228226.2	chr15	-	1896	13	FSM	ENSMUSG00000022378.15	ENSMUST00000228226.2	1896	13	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_12	159.721024150096	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932192	63802792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
ENSMUST00000228232.2	chr14	-	2535	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228232.2	2535	9	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	1522.21910380865	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAACTGTCTCCAAAAT	8749	False	NA	39	True	AATAAA	-15	NA	52341461	52312258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334778_52336002_52341345
ENSMUST00000228255.2	chr14	+	1692	8	FSM	ENSMUSG00000021916.17	ENSMUST00000228255.2	1692	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	42.5992239078486	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACCTATTTGCTTCCCCA	8585	False	NA	5	True	AATAAA	-16	NA	30728415	30733944	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_30728470_30728589_30728689_30730610_30730825_30731691_30732123_30732253_30732367_30732820_30732988_30733079_30733191_30733441
ENSMUST00000228298.2	chr17	-	502	3	FSM	ENSMUSG00000062012.15	ENSMUST00000228298.2	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	39	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTGGTGTTATAACTAT	4879	False	NA	NA	False	NA	NA	NA	23805150	23803763	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_23803913_23804411_23804549_23804934
ENSMUST00000228328.2	chr14	+	4245	15	FSM	ENSMUSG00000021918.11	ENSMUST00000228328.2	4245	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	13.7241408043027	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTATGGTGTGTG	NA	False	NA	27	True	AGTAAA	-18	NA	30673333	30710778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ENSMUST00000228371.2	chr15	+	2102	13	FSM	ENSMUSG00000022556.12	ENSMUST00000228371.2	2102	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	120.605071756263	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATACATATA	7144	False	NA	12	True	NA	NA	NA	76361644	76385172	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76383331_76383416_76384147_76384254_76384466_76384537_76384616
ENSMUST00000228408.2	chr14	+	415	2	FSM	ENSMUSG00000072571.4	ENSMUST00000228408.2	415	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAGGGGCATCTCATT	NA	False	NA	NA	False	NA	NA	NA	52254350	52254879	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_52254399_52254512
ENSMUST00000228414.2	chr14	-	516	4	FSM	ENSMUSG00000010376.16	ENSMUST00000228414.2	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	873.770501269578	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGTGCAGTGTTCCTG	NA	False	NA	-134	True	NA	NA	NA	55909334	55899842	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55900083_55900871_55900955_55901268_55901379_55909251
ENSMUST00000228505.2	chr14	+	1591	4	FSM	ENSMUSG00000115483.2	ENSMUST00000228505.2	1591	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	11.5854314646552	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGCTCTAGAAAACA	NA	False	NA	NA	False	AATAAA	-18	NA	43132674	43163468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_43132821_43157302_43157435_43158114_43158297_43162337
ENSMUST00000228521.2	chr15	+	1790	2	FSM	ENSMUSG00000044250.9	ENSMUST00000228521.2	1790	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTCCAAAAGTGGTTC	NA	False	NA	14	True	AATAAA	-15	NA	97259082	97283561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_97259217_97281905
ENSMUST00000228529.2	chr14	+	3723	24	FSM	ENSMUSG00000021913.9	ENSMUST00000228529.2	3723	24	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_11	40.4855688541514	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCCTCCTTTCCTA	NA	False	NA	12	True	AATAAA	-18	NA	32043975	32070108	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ENSMUST00000228538.3	chr15	-	915	12	FSM	ENSMUSG00000050891.11	ENSMUST00000228538.3	915	12	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	18.2181455270914	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTTTTATGA	NA	False	NA	-1	True	ATTAAA	-16	NA	58805576	58772822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800532_58800599_58805527
ENSMUST00000228604.2	chr14	-	2435	15	FSM	ENSMUSG00000040472.16	ENSMUST00000228604.2	2435	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	142.040451266244	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAGAAAAGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	55959633	55953333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959509
ENSMUST00000228671.2	chr15	+	2842	5	FSM	ENSMUSG00000022200.9	ENSMUST00000228671.2	2842	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	191.953607676438	452	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTATTTTATGAGT	100	False	NA	11	True	AATAAA	-13	NA	12321720	12351677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12343358_12343408_12349453
ENSMUST00000228672.2	chr14	+	2173	15	FSM	ENSMUSG00000036023.7	ENSMUST00000228672.2	2173	15	0	0	0	0	multi-exon	FALSE	canonical	3	708	junction_7	45.539397610134	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045402	51058757	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ENSMUST00000228686.2	chr14	+	2347	13	FSM	ENSMUSG00000052395.18	ENSMUST00000228686.2	2347	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	13.9351175093718	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTTCCCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	30376363	30413274	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398865_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ENSMUST00000228727.2	chr14	-	2388	5	FSM	ENSMUSG00000021891.9	ENSMUST00000228727.2	2388	5	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_4	24.3823706804732	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGACCTCTTTATATGTA	NA	False	NA	NA	False	NA	NA	NA	31216987	31203304	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ENSMUST00000228736.2	chr14	-	702	4	FSM	ENSMUSG00000021917.17	ENSMUST00000228736.2	702	4	0	0	0	0	multi-exon	FALSE	canonical	3	1717	junction_2	34.7658836600865	6240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACATTTGTTTTCTTTTT	NA	False	NA	-5	True	AATAAA	-16	NA	30723320	30721783	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
ENSMUST00000228748.2	chr14	-	1691	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	0	0	0	0	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	5847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	8746	False	NA	-17	True	AATAAA	-21	NA	52341464	52311908	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUST00000228767.2	chr14	-	1008	4	FSM	ENSMUSG00000021917.17	ENSMUST00000228767.2	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	828.969775618441	6864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACATTTGTTTTCTTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	30723629	30721782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_30722180_30722634_30722718_30722800_30722861_30723161
ENSMUST00000228774.2	chr14	-	2264	5	FSM	ENSMUSG00000042354.8	ENSMUST00000228774.2	2264	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	372.387566924569	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTATGCTGTTGTTAGTG	NA	False	NA	-3	True	NA	NA	NA	30741050	30737234	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_30737342_30738278_30738412_30738769_30738865_30739013_30739125_30739232
ENSMUST00000228788.3	chr15	+	4394	6	FSM	ENSMUSG00000022412.15	ENSMUST00000228788.3	4394	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	71.0785480999718	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGCAGGGCTGGCTCTG	2836	False	NA	NA	False	NA	NA	NA	80118301	80136987	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ENSMUST00000228826.2	chr14	-	2492	16	FSM	ENSMUSG00000040472.16	ENSMUST00000228826.2	2492	16	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_15	120.970777003741	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAGAAAAGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	55959633	55953333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
ENSMUST00000228899.2	chr14	-	2153	15	FSM	ENSMUSG00000040472.16	ENSMUST00000228899.2	2153	15	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_14	124.625418346175	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGCCCTGACAACACTT	NA	False	NA	1	True	AATAAA	-39	NA	55959638	55953761	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
ENSMUST00000228985.2	chr15	+	2553	8	FSM	ENSMUSG00000023034.8	ENSMUST00000228985.2	2553	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	37.8897433754997	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTTTTTTTCTGTTT	517	False	NA	19	True	AATAAA	-21	NA	101152149	101172676	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_101152233_101156188_101156308_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ENSMUST00000229007.2	chr15	+	2084	14	FSM	ENSMUSG00000022550.19	ENSMUST00000229007.2	2084	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.8681258102422	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTTTGTGTTTTAT	NA	False	NA	NA	False	AAGAAA	-1	NA	76468723	76480016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76468835_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479654_76479738
ENSMUST00000229019.2	chr15	-	941	10	FSM	ENSMUSG00000115987.2	ENSMUST00000229019.2	941	10	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_8	311.796586112021	1773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9671	False	NA	-25	True	AATAAA	-17	NA	76510206	76506308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508919_76509333_76509406_76510188
ENSMUST00000229038.2	chr16	+	2250	17	FSM	ENSMUSG00000022517.18	ENSMUST00000229038.2	2250	17	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	129.828191757415	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCTGTCACTGCTGC	2943	False	NA	NA	False	NA	NA	NA	4704131	4755285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ENSMUST00000229055.2	chr15	-	2212	5	FSM	ENSMUSG00000054967.8	ENSMUST00000229055.2	2212	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	6.04152298679729	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGGCTCTGAGTTTGT	8485	False	NA	NA	False	ATTAAA	-24	NA	76809648	76794570	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76809575
ENSMUST00000229085.2	chr15	-	1270	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229085.2	1270	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	151.287309447951	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCTGGGCCAGCCT	8894	False	NA	-22	True	AATAAA	-22	NA	75801627	75796524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800362_75800740_75800899_75801567
ENSMUST00000229101.2	chr16	+	1358	11	FSM	ENSMUSG00000055447.20	ENSMUST00000229101.2	1358	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	27.0739727413618	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGAATCCCATTTTT	NA	False	NA	19	True	AATAAA	-23	NA	49675995	49731444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_49676196_49688127_49688476_49689380_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49731231
ENSMUST00000229131.2	chr15	+	586	1	FSM	ENSMUSG00000116090.2	ENSMUST00000229131.2	586	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	754	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAAGCTTCCCTCCTGTC	NA	False	NA	NA	False	NA	NA	NA	8004555	8005141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_8004600_8005100
ENSMUST00000229140.2	chr15	+	982	6	FSM	ENSMUSG00000022546.6	ENSMUST00000229140.2	982	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	4.40908153700972	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGTGGCTGCCTGGGT	5989	False	NA	2	True	AATAAA	-18	NA	76582410	76583848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76582583_76582655_76582793_76582914_76583090_76583195_76583352_76583435_76583549_76583619
ENSMUST00000229159.2	chr15	+	628	5	FSM	ENSMUSG00000068220.7	ENSMUST00000229159.2	628	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1006.87148509629	6847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATCCAGCCCTTTCATG	NA	False	NA	9	True	AATAAA	-20	NA	78810925	78814391	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_78811005_78812169_78812250_78812764_78812868_78813832_78814005_78814197
ENSMUST00000229183.2	chr15	+	1020	5	FSM	ENSMUSG00000003970.10	ENSMUST00000229183.2	1020	5	0	0	0	0	multi-exon	FALSE	canonical	3	10804	junction_2	302.309754225695	140358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788301	76790514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ENSMUST00000229206.2	chr16	+	1316	11	FSM	ENSMUSG00000055447.20	ENSMUST00000229206.2	1316	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	24.8766959220874	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGAATCCCATTTTT	NA	False	NA	19	True	AATAAA	-23	NA	49676007	49731444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49729065_49729099_49731231
ENSMUST00000229245.2	chr15	-	593	4	FSM	ENSMUSG00000116295.2	ENSMUST00000229245.2	593	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	294.920328224421	50084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97065123	97054909	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_97055131_97059094_97059277_97064383_97064508_97065057
ENSMUST00000229261.2	chr15	-	1631	8	FSM	ENSMUSG00000115987.2	ENSMUST00000229261.2	1631	8	0	0	0	0	multi-exon	TRUE	canonical	3	892	junction_7	94.9343489588721	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGGCAGCTATACTG	9591	False	NA	-24	True	AATAAA	-18	NA	76510286	76506307	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
ENSMUST00000229275.2	chr15	+	516	5	FSM	ENSMUSG00000056851.15	ENSMUST00000229275.2	516	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	63.021325755652	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCTATATACCCTCAGT	2147	False	NA	12	True	AATAAA	-25	NA	102379111	102383199	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009
ENSMUST00000229289.2	chr15	-	1223	10	FSM	ENSMUSG00000022570.8	ENSMUST00000229289.2	1223	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	159.308071761587	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCTGGGCCAGCCT	8885	False	NA	-22	True	AATAAA	-22	NA	75801636	75796524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798973_75800740_75800899_75801567
ENSMUST00000229348.2	chr15	-	1069	8	FSM	ENSMUSG00000023755.11	ENSMUST00000229348.2	1069	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	69.0784824290016	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTGTCTGGAGAGAGC	NA	False	NA	-22	True	AATAAA	-20	NA	98779157	98775658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777645_98777726_98778388_98778461_98779030
ENSMUST00000229385.2	chr15	-	1291	9	FSM	ENSMUSG00000022474.16	ENSMUST00000229385.2	1291	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	470.161341988046	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845043	81835308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81835814_81836124_81836241_81836925_81837002_81838572_81838652_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ENSMUST00000229408.2	chr15	-	1931	12	FSM	ENSMUSG00000022429.12	ENSMUST00000229408.2	1931	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	21.834085113127	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAATATAAGACTATTTA	NA	False	NA	NA	False	AATAAA	-10	NA	79489300	79445811	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
ENSMUST00000229411.2	chr15	+	1854	6	FSM	ENSMUSG00000068114.8	ENSMUST00000229411.2	1854	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	18.8933850857913	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTATGTCTTTGGCTTC	NA	False	NA	21	True	AATAAA	-32	NA	82012225	82026400	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_82012251_82014252_82014372_82015624_82015747_82018781_82018964_82019270_82019343_82025066
ENSMUST00000229424.2	chr15	+	542	4	FSM	ENSMUSG00000000346.10	ENSMUST00000229424.2	542	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	563.556760426332	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAACTTCTTCATGGGTGG	NA	False	NA	NA	False	NA	NA	NA	100513985	100517329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_100514082_100514793_100514913_100515805_100516052_100517248
ENSMUST00000229428.2	chr15	+	1455	8	FSM	ENSMUSG00000052369.9	ENSMUST00000229428.2	1455	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	28.3318527024094	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCACTGTCTCTGACTG	7680	False	NA	10	True	AATAAA	-16	NA	97862109	97868155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_97862217_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
ENSMUST00000229589.2	chr15	-	1814	15	FSM	ENSMUSG00000036678.9	ENSMUST00000229589.2	1814	15	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_6	35.0069963852709	2295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCAGGATGTAACTCCG	NA	False	NA	-9	True	AATAAA	-21	NA	102259130	102246690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
ENSMUST00000229618.2	chr15	+	1576	14	FSM	ENSMUSG00000056851.15	ENSMUST00000229618.2	1576	14	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	146.176678378513	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGGAGCTTTTTCTTTG	2123	False	NA	5	True	ATTAAA	-5	NA	102379087	102407316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUST00000229641.2	chr15	-	1355	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229641.2	1355	11	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_10	74.8304750753328	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCTGGGCCAGCCT	8840	False	NA	-22	True	AATAAA	-22	NA	75801681	75796524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
ENSMUST00000229680.2	chr16	-	1066	4	FSM	ENSMUSG00000022671.14	ENSMUST00000229680.2	1066	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	282.609664063744	3343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCTATGTGGAGTCCT	NA	False	NA	-7	True	ATTAAA	-17	NA	15681174	15666309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_15666594_15678561_15678635_15680261_15680408_15680611
ENSMUST00000229702.2	chr15	-	394	2	FSM	ENSMUSG00000116097.2	ENSMUST00000229702.2	394	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGCTGTGGTCGGAGTAT	2853	False	NA	-3	True	NA	NA	NA	78465816	78458610	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_78458873_78465684
ENSMUST00000229709.2	chr16	-	301	2	FSM	ENSMUSG00000115907.2	ENSMUST00000229709.2	301	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCCATTAAAAATTTGAAC	NA	False	NA	NA	False	NA	NA	NA	13557068	13555715	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_13555865_13556916
ENSMUST00000229739.2	chr15	+	1311	2	FSM	ENSMUSG00000071711.13	ENSMUST00000229739.2	1311	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAACATTTGTGGTTGT	NA	False	NA	NA	False	AATAAA	-10	NA	78294181	78298206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_78294865_78297578
ENSMUST00000229747.2	chr15	-	286	4	FSM	ENSMUSG00000068101.12	ENSMUST00000229747.2	286	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	607.292534304698	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTTGGCCCCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	82128538	82124079	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_82124160_82125527_82125621_82128333_82128414_82128505
ENSMUST00000229755.2	chr15	-	2677	18	FSM	ENSMUSG00000015377.11	ENSMUST00000229755.2	2677	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_17	28.0313714517704	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTCTGGTCCCTGACT	NA	False	NA	-4	True	AGTAAA	-14	NA	89080647	89069019	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_89069313_89069394_89069470_89069564_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
ENSMUST00000229813.2	chr15	-	2091	7	FSM	ENSMUSG00000022559.9	ENSMUST00000229813.2	2091	7	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_6	11.5325625946708	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422946	76419929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922
ENSMUST00000229822.2	chr15	+	2048	7	FSM	ENSMUSG00000056851.15	ENSMUST00000229822.2	2048	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	199.172803252742	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAATAAGAGTGTCTTT	192	False	NA	NA	False	NA	NA	NA	102394292	102408496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102394388_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUST00000229826.2	chr15	-	1319	8	FSM	ENSMUSG00000018865.10	ENSMUST00000229826.2	1319	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	10.0285307284481	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTGCATTTCCAGGGG	NA	False	NA	NA	False	AATAAA	-16	NA	83989810	83961345	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83961784_83962969_83963099_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
ENSMUST00000229854.2	chr15	+	1499	14	FSM	ENSMUSG00000056851.15	ENSMUST00000229854.2	1499	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_11	165.819713890698	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGGAGCTTTTTCTTTG	2254	False	NA	5	True	ATTAAA	-5	NA	102379218	102407316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102398186_102398243_102399068_102399239_102406923
ENSMUST00000229877.2	chr15	-	4726	13	FSM	ENSMUSG00000055065.8	ENSMUST00000229877.2	4726	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_12	13.0064086767511	735	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGAATTTTTTATTACA	NA	False	NA	-40	True	AATAAA	-15	NA	79430942	79411936	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_79414719_79415878_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
ENSMUST00000229951.2	chr15	-	1405	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229951.2	1405	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	184.382889661704	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCTGGGCCAGCCT	8946	False	NA	-22	True	AATAAA	-22	NA	75801575	75796524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798138_75798307_75798591_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
ENSMUST00000229961.2	chr16	+	1162	4	FSM	ENSMUSG00000022516.11	ENSMUST00000229961.2	1162	4	0	0	0	0	multi-exon	FALSE	canonical	1	32	junction_3	242.27670131484	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCATGGCCACATCTTT	95	False	NA	25	True	AATAAA	-31	NA	4756975	4758896	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_4757158_4757241_4757503_4758059_4758180_4758297
ENSMUST00000229999.2	chr15	-	510	4	FSM	ENSMUSG00000116295.2	ENSMUST00000229999.2	510	4	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_3	214.206027511418	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTCCGCTTTCCTCCCG	NA	False	NA	NA	False	NA	NA	NA	97065124	97059069	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_97059277_97059835_97059964_97064383_97064492_97065057
ENSMUST00000230086.2	chr15	-	1963	16	FSM	ENSMUSG00000022464.15	ENSMUST00000230086.2	1963	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	409.635849125646	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGCCGTGCAGTGCAGT	NA	False	NA	-12	True	ATTAAA	-23	NA	96929092	96894648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96929014
ENSMUST00000230105.2	chr15	+	1981	4	FSM	ENSMUSG00000022463.9	ENSMUST00000230105.2	1981	4	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_2	39.6176167324027	18796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTG	2243	False	NA	NA	False	NA	NA	NA	82031451	82058095	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953
ENSMUST00000230106.2	chr15	+	2960	5	FSM	ENSMUSG00000033669.9	ENSMUST00000230106.2	2960	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	32.962099447699	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAAGGTGTAGCCTGTAC	NA	False	NA	NA	False	AATAAA	-13	NA	76763508	76776589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76763798_76764938_76764983_76765311_76765439_76772430_76772548_76774206
ENSMUST00000230112.2	chr15	-	2815	13	FSM	ENSMUSG00000022614.9	ENSMUST00000230112.2	2815	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	68.2647521704202	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACCCATTTACTAGTGG	NA	False	NA	-12	True	AATAAA	-12	NA	89239836	89235350	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238658_89239021_89239558
ENSMUST00000230157.2	chr15	-	4410	37	FSM	ENSMUSG00000034022.9	ENSMUST00000230157.2	4410	37	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	98.8724822532214	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491711	76480008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76480108_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ENSMUST00000230171.2	chr15	+	1283	11	FSM	ENSMUSG00000046434.17	ENSMUST00000230171.2	1283	11	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_9	4985.84843431888	3859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTTTCTTGTCTTCCT	NA	False	NA	13	True	AATAAA	-13	NA	103148858	103155119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103154772_103154849_103154971
ENSMUST00000230177.2	chr15	+	1680	6	FSM	ENSMUSG00000059895.14	ENSMUST00000230177.2	1680	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	34.6028900527109	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTGAAGAGTGTTAT	NA	False	NA	20	True	AATAAA	-14	NA	73596646	73629076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_73596698_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
ENSMUST00000230192.2	chr15	+	2665	17	FSM	ENSMUSG00000033128.10	ENSMUST00000230192.2	2665	17	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_10	123.234516649152	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTAGCTGCTCTTGTCA	NA	False	NA	14	True	AATAAA	-14	NA	78761750	78778781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773919_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ENSMUST00000230229.2	chr15	-	612	5	FSM	ENSMUSG00000022474.16	ENSMUST00000230229.2	612	5	0	0	0	0	multi-exon	FALSE	canonical	3	1051	junction_1	37.9300342736465	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTACTGTGTGTCATTTC	NA	False	NA	-4	True	NA	NA	NA	81845034	81839743	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ENSMUST00000230274.2	chr15	+	1111	4	FSM	ENSMUSG00000063236.7	ENSMUST00000230274.2	1111	4	0	0	0	0	multi-exon	FALSE	canonical	1	74	junction_1	105.909814884594	1480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGATGGTGTGAGAGA	NA	False	NA	21	True	AATAAA	-13	NA	76832721	76834929	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76833120_76833267_76833353_76833743_76833891_76834448
ENSMUST00000230281.2	chr16	+	1271	10	FSM	ENSMUSG00000055447.20	ENSMUST00000230281.2	1271	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	27.4352211222124	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGAATCCCATTTTT	NA	False	NA	19	True	AATAAA	-23	NA	49676018	49731444	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728446_49731236
ENSMUST00000230294.2	chr15	+	2266	8	FSM	ENSMUSG00000037353.10	ENSMUST00000230294.2	2266	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	31.1808418417333	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	2347	False	NA	26	True	AGTAAA	-15	NA	100366915	100377044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_100367020_100367565_100367718_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUST00000230364.2	chr15	-	1603	10	FSM	ENSMUSG00000022570.8	ENSMUST00000230364.2	1603	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	195.538572494875	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCTGGGCCAGCCT	8925	False	NA	-22	True	AATAAA	-22	NA	75801596	75796524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75796844_75797133_75797234_75797431_75797709_75797977_75798043_75798138_75798307_75798647_75798722_75798815_75799048_75800277_75800393_75800740_75800899_75801501
ENSMUST00000230444.2	chr15	-	1521	11	FSM	ENSMUSG00000037570.17	ENSMUST00000230444.2	1521	11	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_2	90.6366923491805	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTTTATTTTTTTTT	NA	False	NA	0	True	AATAAA	-20	NA	99146845	99140698	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582
ENSMUST00000230445.2	chr15	+	2798	23	FSM	ENSMUSG00000033065.15	ENSMUST00000230445.2	2798	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	24.5577830991277	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGCTCTTGTTATTATCT	6337	False	NA	11	True	AATAAA	-23	NA	97990524	98030332	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_97990547_98010001_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ENSMUST00000230489.2	chr15	+	3118	13	FSM	ENSMUSG00000046434.17	ENSMUST00000230489.2	3118	13	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_11	5605.39520548928	31904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTTTCTTGTCTTCCT	NA	False	NA	13	True	AATAAA	-13	NA	103148893	103155119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682_103154394_103154772_103154849_103154971
ENSMUST00000230494.2	chr15	-	382	2	FSM	ENSMUSG00000022450.7	ENSMUST00000230494.2	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTGCACTGGTGAACC	6280	False	NA	-37	True	AATAAA	-26	NA	82238455	82234364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_82234573_82238281
ENSMUST00000230495.2	chr16	-	1147	3	FSM	ENSMUSG00000022677.16	ENSMUST00000230495.2	1147	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	185.5	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGCTTATGGTCATG	NA	False	NA	-8	True	NA	NA	NA	14135208	14117111	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_14118074_14122317_14122452_14135157
ENSMUST00000230504.2	chr15	-	252	1	FSM	ENSMUSG00000115938.2	ENSMUST00000230504.2	252	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	574	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGCCCCTGATTGAAGA	NA	False	NA	NA	False	NA	NA	NA	99604694	99604442	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_99604400_99604700
ENSMUST00000230512.2	chr15	+	1728	3	FSM	ENSMUSG00000034259.9	ENSMUST00000230512.2	1728	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	318	1556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACTGGACTAATGTCTT	947	False	NA	4	True	NA	NA	NA	76211664	76214873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76211868_76213229_76213437_76213555
ENSMUST00000230513.2	chr15	-	1953	8	FSM	ENSMUSG00000022559.9	ENSMUST00000230513.2	1953	8	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_7	19.025224930956	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTATTTATTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	76422935	76419926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116
ENSMUST00000230572.2	chr15	-	762	4	FSM	ENSMUSG00000023031.9	ENSMUST00000230572.2	762	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	14.0554457615387	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCTTGCATTTATAAT	7111	False	NA	2	True	AATAAA	-20	NA	100579843	100572301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_100572599_100573204_100573355_100579023_100579170_100579674
ENSMUST00000230729.2	chr15	+	1062	7	FSM	ENSMUSG00000022471.15	ENSMUST00000230729.2	1062	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	249.016342614072	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGCACTTTTCAGTA	63	False	NA	28	True	AATAAA	-14	NA	81912332	81924285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_81912356_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ENSMUST00000230736.2	chr15	-	1319	11	FSM	ENSMUSG00000022570.8	ENSMUST00000230736.2	1319	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	183.950428104965	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCTGGGCCAGCCT	8894	False	NA	-22	True	AATAAA	-22	NA	75801627	75796524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798138_75798291_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
ENSMUST00000230743.2	chr15	-	1314	4	FSM	ENSMUSG00000003355.8	ENSMUST00000230743.2	1314	4	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_2	35.1220095603249	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTATTTTTCACTCGGT	NA	False	NA	NA	False	AATAAA	-19	NA	98626033	98622246	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98622484_98624364_98625180_98625563_98625630_98625837
ENSMUST00000230812.2	chr15	-	2230	15	FSM	ENSMUSG00000036678.9	ENSMUST00000230812.2	2230	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	133.897082012375	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGATGTAACTCCGAGTG	NA	False	NA	-5	True	AATAAA	-25	NA	102258913	102246686	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254396_102254921_102254969_102255112_102255205_102255470_102255527_102258387
ENSMUST00000230823.2	chr15	-	2028	18	FSM	ENSMUSG00000015377.11	ENSMUST00000230823.2	2028	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	25.5399815473592	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAGTCTGGTCCCTGA	NA	False	NA	-6	True	AGTAAA	-12	NA	89080668	89069021	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ENSMUST00000230868.2	chr15	+	714	3	FSM	ENSMUSG00000032783.10	ENSMUST00000230868.2	714	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	11	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGACATCTT	NA	False	NA	NA	False	NA	NA	NA	98972867	98973947	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_98972974_98973230_98973380_98973488
ENSMUST00000231001.2	chr15	+	2153	6	FSM	ENSMUSG00000037353.10	ENSMUST00000231001.2	2153	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	5.31413210223457	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	5719	False	NA	27	True	AGTAAA	-16	NA	100370287	100377045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUST00000231024.2	chr15	-	655	3	FSM	ENSMUSG00000116295.2	ENSMUST00000231024.2	655	3	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	244.5	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTGATCATACCATAGC	NA	False	NA	-10	True	AATAAA	-17	NA	97065125	97058813	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_97059277_97064383_97064508_97065057
ENSMUST00000231029.2	chr15	-	623	3	FSM	ENSMUSG00000023044.3	ENSMUST00000231029.2	623	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	57.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102087454	102085747	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_102086222_102086961_102087052_102087395
ENSMUST00000231039.2	chr15	-	3923	15	FSM	ENSMUSG00000022464.15	ENSMUST00000231039.2	3923	15	0	0	0	0	multi-exon	FALSE	canonical	3	1416	junction_8	96.7698721879145	2253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTATGATCTTCTTTCGT	NA	False	NA	-9	True	AATAAA	-19	NA	96917832	96892700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604
ENSMUST00000231058.2	chr15	+	1646	2	FSM	ENSMUSG00000063236.7	ENSMUST00000231058.2	1646	2	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATGGTGTGAGAGAGAG	NA	False	NA	24	True	AATAAA	-16	NA	76832728	76834932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_76833891_76834448
ENSMUST00000231066.2	chr15	-	1980	9	FSM	ENSMUSG00000022992.18	ENSMUST00000231066.2	1980	9	0	0	0	0	multi-exon	FALSE	canonical	1	77	junction_8	414.912038870891	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTAAAGTGATCTG	NA	False	NA	-21	True	ATTAAA	-14	NA	98432145	98416700	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98432121
ENSMUST00000231067.2	chr15	-	3262	13	FSM	ENSMUSG00000022614.9	ENSMUST00000231067.2	3262	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	69.3126471544375	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTAGTGGTTTTTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	89239815	89235341	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766
ENSMUST00000231074.2	chr15	+	2692	11	FSM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_6	54.9377829913076	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7338	False	NA	30	True	ATTAAA	-41	NA	85744146	85760774	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
ENSMUST00000231141.2	chr15	+	1541	9	FSM	ENSMUSG00000046434.17	ENSMUST00000231141.2	1541	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	4388.75483480224	3180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148920	103153382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152385_103152456_103152682
ENSMUST00000231152.2	chr15	-	1271	2	FSM	ENSMUSG00000053929.18	ENSMUST00000231152.2	1271	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTTGTTTATTCTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	76543956	76542332	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_76543066_76543418
ENSMUST00000231184.2	chr15	-	3103	11	FSM	ENSMUSG00000016664.17	ENSMUST00000231184.2	3103	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	180.758512939225	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCTTGCATCCACCC	NA	False	NA	0	True	AATAAA	-27	NA	83317025	83260322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316952
ENSMUST00000231241.2	chr17	+	1571	7	FSM	ENSMUSG00000036552.20	ENSMUST00000231241.2	1571	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	30.7064958744707	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGAACTCTATGTTGC	NA	False	NA	5	True	ATTAAA	-18	NA	15273320	15284485	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283863
ENSMUST00000231315.2	chr16	+	1213	9	FSM	ENSMUSG00000003235.14	ENSMUST00000231315.2	1213	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1022.68091309069	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20323512	20328073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_20323541_20323948_20324109_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ENSMUST00000231351.2	chr16	-	640	5	FSM	ENSMUSG00000003955.9	ENSMUST00000231351.2	640	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	448.847621693599	2059	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTCTTTGTTTTGTT	NA	False	NA	-5	True	AATACA	-14	NA	35891739	35864215	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891686
ENSMUST00000231355.2	chr17	+	2194	4	FSM	ENSMUSG00000116802.2	ENSMUST00000231355.2	2194	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	12.3917535302941	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTATGAATGTAATTAATG	6224	False	NA	NA	False	NA	NA	NA	17455133	17486325	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_17455288_17482739_17482867_17483108_17483170_17484473
ENSMUST00000231380.2	chr16	-	1852	11	FSM	ENSMUSG00000022962.16	ENSMUST00000231380.2	1852	11	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_10	453.295984981116	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGATTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-22	NA	91443813	91430292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ENSMUST00000231389.2	chr16	+	2457	13	FSM	ENSMUSG00000022808.6	ENSMUST00000231389.2	2457	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	155.567844256667	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTATTATTTTAAGAT	9283	False	NA	26	True	AATAAA	-26	NA	33071813	33119935	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101095_33106313_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ENSMUST00000231392.2	chr16	+	678	5	FSM	ENSMUSG00000021018.9	ENSMUST00000231392.2	678	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	331.022185812371	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTTCTCCATTGTCAT	1345	False	NA	12	True	ATTAAA	-13	NA	20536855	20541014	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_20536917_20537573_20537658_20537740_20537835_20539268_20539353_20540659
ENSMUST00000231414.2	chr16	-	806	8	FSM	ENSMUSG00000022938.9	ENSMUST00000231414.2	806	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	10.770329614269	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATGTCACAGGAGTCT	NA	False	NA	-10	True	AATAAA	-24	NA	97313730	97272289	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_97272424_97276447_97276581_97276934_97277023_97277579_97277631_97279548_97279608_97282986_97283111_97302059_97302204_97313657
ENSMUST00000231433.2	chr11	-	855	4	FSM	ENSMUSG00000045942.14	ENSMUST00000231433.2	855	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCTGATACTCAATGAAG	NA	False	NA	NA	False	NA	NA	NA	51147091	51144619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_51144880_51145185_51145492_51145985_51146074_51146890
ENSMUST00000231451.2	chr16	-	1395	17	FSM	ENSMUSG00000022771.18	ENSMUST00000231451.2	1395	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	252.107484208125	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGGGTCCAGTTTGAGC	NA	False	NA	-35	True	AATAAA	-13	NA	16929106	16906514	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910874_16910951_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ENSMUST00000231453.2	chr4	+	1368	2	FSM	ENSMUSG00000086290.10	ENSMUST00000231453.2	1368	2	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGAGGAAGAGCACCCT	NA	False	NA	NA	False	NA	NA	NA	132035986	132037601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132037215_132037461
ENSMUST00000231468.2	chr16	+	392	3	FSM	ENSMUSG00000075229.12	ENSMUST00000231468.2	392	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	434	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTACATATTTATTT	NA	False	NA	16	True	ATTAAA	-13	NA	35892453	35912481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_35892508_35910270_35910331_35912203
ENSMUST00000231471.2	chr16	-	1215	8	FSM	ENSMUSG00000033809.16	ENSMUST00000231471.2	1215	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	139.403247114701	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGGAACGGACTCTGTG	NA	False	NA	-55	True	NA	NA	NA	20429511	20424268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427491_20427640_20427736_20427837_20429292
ENSMUST00000231548.2	chr16	-	1110	5	FSM	ENSMUSG00000022760.18	ENSMUST00000231548.2	1110	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	41.2757495389242	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTTTGGCTTGGCTGG	7275	False	NA	1	True	AATAAA	-19	NA	17348911	17345941	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348841
ENSMUST00000231579.2	chr16	+	1703	8	FSM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_3	35.6118531058502	2291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCCAGCCACTTCCAAAT	5404	False	NA	107	True	NA	NA	NA	35590744	35645918	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ENSMUST00000231609.2	chr16	+	3999	13	FSM	ENSMUSG00000022833.8	ENSMUST00000231609.2	3999	13	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_6	18.9487613198213	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTACTTATTTTGA	NA	False	NA	15	True	AATATA	-24	NA	34511101	34545572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ENSMUST00000231621.2	chr16	+	1485	8	FSM	ENSMUSG00000000884.18	ENSMUST00000231621.2	1485	8	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	85.0267664938998	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCCTCAAGGTGGGAAC	NA	False	NA	15	True	AATAAA	-17	NA	18317462	18383290	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_18317602_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ENSMUST00000231656.2	chr16	+	689	4	FSM	ENSMUSG00000021018.9	ENSMUST00000231656.2	689	4	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_2	345.101273380567	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCTCCATTGTCATT	1069	False	NA	13	True	ATTAAA	-14	NA	20536579	20541015	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_20536745_20537573_20537658_20539268_20539353_20540659
ENSMUST00000231681.2	chr16	-	1156	7	FSM	ENSMUSG00000049916.13	ENSMUST00000231681.2	1156	7	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_4	26.8824602048746	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16943004	16931262	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942853
ENSMUST00000231690.2	chr16	-	1349	8	FSM	ENSMUSG00000035699.9	ENSMUST00000231690.2	1349	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	14.3370506174793	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACACTGCTTCTGTTGGC	NA	False	NA	-8	True	AATAAA	-27	NA	32306521	32294340	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_32294697_32295190_32295297_32295984_32296132_32296365_32296478_32297122_32297282_32298467_32298623_32304952_32305048_32306302
ENSMUST00000231723.2	chr17	+	1586	11	FSM	ENSMUSG00000116953.2	ENSMUST00000231723.2	1586	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	84.5842183861741	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTAATGTTTTGGCCCT	NA	False	NA	NA	False	AAAAAG	-18	NA	15199168	15209673	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_15199257_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335_15208366_15209159
ENSMUST00000231741.2	chr16	-	1556	5	FSM	ENSMUSG00000116673.2	ENSMUST00000231741.2	1556	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.7204586978184	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTGTAGCTCAGAATGG	NA	False	NA	NA	False	NA	NA	NA	97883650	97866643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_97867866_97868954_97869016_97869203_97869331_97870510_97870552_97883545
ENSMUST00000231743.2	chr17	+	1720	13	FSM	ENSMUSG00000041831.18	ENSMUST00000231743.2	1720	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.8377186909395	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTAACTCCCAGCATTT	NA	False	NA	4	True	AATAAA	-13	NA	6956470	7005441	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_6956555_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
ENSMUST00000231768.2	chr16	+	1572	8	FSM	ENSMUSG00000022871.14	ENSMUST00000231768.2	1572	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	190.973018716129	1973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACTGGAAATGAGACTAA	NA	False	NA	35	True	AATAAA	-41	NA	22737083	22758528	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22737345_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ENSMUST00000231798.2	chr16	+	2883	16	FSM	ENSMUSG00000022855.10	ENSMUST00000231798.2	2883	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	119.348341700531	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGATAATTTTTCCTC	2371	False	NA	22	True	AATAAA	-22	NA	21828402	21866631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_21828493_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUST00000231825.2	chr17	+	1717	6	FSM	ENSMUSG00000046711.17	ENSMUST00000231825.2	1717	6	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	2331.48484876055	4081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCTGGTGTAAGGAGC	NA	False	NA	NA	False	AATAAA	-22	NA	27775588	27782643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_27775686_27775925_27776041_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ENSMUST00000231866.2	chr17	+	584	5	FSM	ENSMUSG00000046711.17	ENSMUST00000231866.2	584	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	1926.39253204013	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGGATTCGGCTCAGTC	NA	False	NA	NA	False	NA	NA	NA	27775605	27781613	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_27775686_27778506_27778678_27779901_27779986_27780438_27780486_27781411
ENSMUST00000231904.2	chr16	-	1239	8	FSM	ENSMUSG00000033809.16	ENSMUST00000231904.2	1239	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	139.378650313688	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGGAACGGACTCTGTG	NA	False	NA	-55	True	NA	NA	NA	20429511	20424268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20429329
ENSMUST00000231913.2	chr16	+	1230	5	FSM	ENSMUSG00000080717.11	ENSMUST00000231913.2	1230	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	45.9292934846597	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	14	True	NA	NA	NA	97798563	97817956	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_97798637_97809828_97809956_97810143_97810205_97816865_97816920_97817041
ENSMUST00000231916.2	chr13	+	2008	12	FSM	ENSMUSG00000021686.7	ENSMUST00000231916.2	2008	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	157.287387650916	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGCCTCTCCTAATCC	NA	False	NA	5	True	AATAAA	-15	NA	94609370	94702821	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_+_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94680491_94680531_94684262_94684402_94702112
ENSMUST00000231962.2	chr13	-	769	2	FSM	ENSMUSG00000021760.6	ENSMUST00000231962.2	769	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCATTTTTTTTTCTTTTC	NA	False	NA	NA	False	AATAAA	-29	NA	113182927	113179286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_113179834_113182705
ENSMUST00000231984.2	chr8	-	2905	19	FSM	ENSMUSG00000037300.20	ENSMUST00000231984.2	2905	19	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	106.569342173807	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGTCAGTTTGGTCGTT	NA	False	NA	-8	True	ATTAAA	-16	NA	125448707	125398070	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ENSMUST00000231993.2	chr16	-	615	1	FSM	ENSMUSG00000116835.2	ENSMUST00000231993.2	615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1026	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACGTGATATTTGTAAAA	NA	False	NA	NA	False	NA	NA	NA	33827827	33827212	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_33827200_33827800
ENSMUST00000232013.2	chr17	+	805	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232013.2	805	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2236.74533362652	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCGTAGAGGGTCCTGG	NA	False	NA	NA	False	NA	NA	NA	27775555	27781782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_27775684_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ENSMUST00000232036.2	chr16	-	1246	9	FSM	ENSMUSG00000033918.17	ENSMUST00000232036.2	1246	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	583.055301300829	1199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	False	NA	-16	True	AATAAA	-24	NA	20121137	20098569	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_20098836_20101472_20101571_20104514_20104586_20105669_20105820_20106606_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120958
ENSMUST00000232075.2	chr16	-	2645	8	FSM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	25.2214680179325	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTTACTGTGCCAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	22676417	22631969	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
ENSMUST00000232087.2	chr17	-	1210	4	FSM	ENSMUSG00000116995.2	ENSMUST00000232087.2	1210	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.62466929133727	385	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAC	NA	False	NA	NA	False	NA	NA	NA	3165070	3162064	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_3162848_3163562_3163623_3164462_3164621_3164861
ENSMUST00000232097.2	chr16	+	1597	9	FSM	ENSMUSG00000022871.14	ENSMUST00000232097.2	1597	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	224.84435588869	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAACCTGTTGAC	NA	False	NA	14	True	AATAAA	-20	NA	22739065	22758507	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22739246_22740498_22740626_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ENSMUST00000232114.2	chr16	-	1120	5	FSM	ENSMUSG00000022760.18	ENSMUST00000232114.2	1120	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	44.5329933869261	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGACTACATGCCCAGGC	7210	False	NA	-107	True	NA	NA	NA	17348976	17346049	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348541_17348722_17348888
ENSMUST00000232188.2	chr16	+	443	5	FSM	ENSMUSG00000060636.15	ENSMUST00000232188.2	443	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3515.29062632096	13195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGTATTTTTTTTTC	NA	False	NA	0	True	AATAAA	-15	NA	32876868	32880525	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32876926_32877505_32877536_32877759_32877913_32879048_32879194_32880467
ENSMUST00000232236.2	chr16	-	3404	18	FSM	ENSMUSG00000012114.18	ENSMUST00000232236.2	3404	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	67.9646254416125	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGGAGTTTATTGCA	NA	False	NA	-23	True	AATAAA	-16	NA	17540811	17469084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_17470128_17470568_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ENSMUST00000232253.2	chr17	+	600	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232253.2	600	5	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_4	2144.39797787164	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGCACCCAAGGGAGCAG	NA	False	NA	NA	False	NA	NA	NA	27775614	27781599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781414
ENSMUST00000232260.2	chr4	+	896	4	FSM	ENSMUSG00000086290.10	ENSMUST00000232260.2	896	4	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	29.9369708257569	2451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	False	NA	27	True	AATAAA	-16	NA	132035933	132038335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132036219_132037148_132037215_132037461_132037816_132038144
ENSMUST00000232265.2	chr17	+	1681	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232265.2	1681	5	0	0	0	0	multi-exon	FALSE	canonical	3	3635	junction_2	873.596123789477	15640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAAGGAGCATTCA	NA	False	NA	NA	False	AATAAA	-27	NA	27775547	27782648	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_27775686_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ENSMUST00000232272.2	chr16	+	1852	10	FSM	ENSMUSG00000022800.15	ENSMUST00000232272.2	1852	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	270.152814551092	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATTTTTAAAATGAGTT	NA	False	NA	81	True	TATAAA	-17	NA	32698499	32726880	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32698521_32704493_32704623_32708499_32708600_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ENSMUST00000232287.2	chr16	+	1001	9	FSM	ENSMUSG00000022884.17	ENSMUST00000232287.2	1001	9	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	545.355847131027	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGCCGTGTTCTGATCA	6054	False	NA	NA	False	NA	NA	NA	22926508	22930308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252
ENSMUST00000232289.2	chr16	-	3276	22	FSM	ENSMUSG00000022962.16	ENSMUST00000232289.2	3276	22	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_21	338.409230453656	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443819	91418291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ENSMUST00000232300.2	chr16	+	2262	8	FSM	ENSMUSG00000022800.15	ENSMUST00000232300.2	2262	8	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_4	66.7529713471503	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTTGACTTCTGTCCT	NA	False	NA	15	True	AATAAA	-22	NA	32698176	32726814	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32719310_32721002_32721078_32722788_32722916_32725901
ENSMUST00000232301.2	chr4	+	1538	4	FSM	ENSMUSG00000086290.10	ENSMUST00000232301.2	1538	4	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	0.471404520791032	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	False	NA	27	True	AATAAA	-16	NA	132035986	132038335	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_+_132037215_132037461_132037527_132037761_132037816_132038144
ENSMUST00000232321.2	chr16	-	818	6	FSM	ENSMUSG00000023791.19	ENSMUST00000232321.2	818	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	141.720287891325	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTTTGTCTTCATT	NA	False	NA	0	True	AATAAA	-30	NA	31918558	31903233	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918472
ENSMUST00000232383.2	chr17	+	4499	17	FSM	ENSMUSG00000038141.12	ENSMUST00000232383.2	4499	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	255.117367291508	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6307134	6358589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ENSMUST00000232387.2	chr16	+	546	5	FSM	ENSMUSG00000080717.11	ENSMUST00000232387.2	546	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	48.9508682251909	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTGTCTTAGCTACAT	NA	False	NA	NA	False	NA	NA	NA	97798526	97832636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_97798637_97809828_97809956_97810143_97810205_97816865_97816920_97832442
ENSMUST00000232396.2	chr17	+	1596	8	FSM	ENSMUSG00000116564.2	ENSMUST00000232396.2	1596	8	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_3	41.8120185826896	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATTTGTCTTTTGAA	NA	False	NA	NA	False	AATGAA	-20	NA	17594833	17608016	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325
ENSMUST00000232413.2	chr16	-	529	2	FSM	ENSMUSG00000022748.9	ENSMUST00000232413.2	529	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTTATGTTTTGTGAT	NA	False	NA	-1	True	AATAAA	-17	NA	57427227	57381795	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_57382126_57427028
ENSMUST00000232423.2	chr16	-	2785	10	FSM	ENSMUSG00000003527.10	ENSMUST00000232423.2	2785	10	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_7	33.1126025018337	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTTTCTATCAATTGT	NA	False	NA	0	True	NA	NA	NA	17729179	17718572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17729025
ENSMUST00000232425.2	chr16	+	2114	14	FSM	ENSMUSG00000039456.11	ENSMUST00000232425.2	2114	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	167.90173936812	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGGAAGAAAGTATGG	1120	False	NA	NA	False	NA	NA	NA	93629154	93667590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642243_93644170_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659604_93661847_93661906_93663262_93663427_93667251
ENSMUST00000232448.2	chr16	+	2447	8	FSM	ENSMUSG00000072419.6	ENSMUST00000232448.2	2447	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	195.358069989965	2291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCAGCTCACTCGCCTG	NA	False	NA	NA	False	AATACA	-17	NA	48124270	48140086	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_48124570_48130639_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
ENSMUST00000232499.2	chr17	-	640	6	FSM	ENSMUSG00000092074.3	ENSMUST00000232499.2	640	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3093.1595885114	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGTATTTTATGTAGC	NA	False	NA	NA	False	AATAAA	-12	NA	6367693	6356621	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_6356874_6358912_6359012_6361567_6361646_6361983_6362108_6365191_6365234_6367648
ENSMUST00000232581.2	chr16	+	2950	19	FSM	ENSMUSG00000022779.17	ENSMUST00000232581.2	2950	19	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_1	102.489023802552	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGAGCCTGGGACCTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	16688620	16710849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ENSMUST00000232594.2	chr16	-	454	2	FSM	ENSMUSG00000038965.18	ENSMUST00000232594.2	454	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGCTTGCTTTGTTTTA	NA	False	NA	-19	True	ATTAAA	-17	NA	16994371	16971788	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16972147_16994275
ENSMUST00000232602.2	chr17	-	1263	3	FSM	ENSMUSG00000023806.11	ENSMUST00000232602.2	1263	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	43.5	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAACAAGCTCAGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	7215680	7188267	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_7189139_7209067_7209156_7215376
ENSMUST00000232635.2	chr16	-	1184	4	FSM	ENSMUSG00000022856.10	ENSMUST00000232635.2	1184	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	70.6304938866115	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGCAGGTTCTGAATG	9211	False	NA	-3	True	ATTAAA	-15	NA	21766281	21753076	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21766117
ENSMUST00000232663.2	chr17	+	552	5	FSM	ENSMUSG00000067942.7	ENSMUST00000232663.2	552	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	19.0394327646598	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATCCAGCCAGGAACACC	NA	False	NA	NA	False	NA	NA	NA	21229305	21261818	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_21229371_21231937_21232035_21240333_21240461_21240967_21241097_21261684
ENSMUST00000232670.2	chr16	-	415	2	FSM	ENSMUSG00000059305.13	ENSMUST00000232670.2	415	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAACTGCAGCCTGAGG	NA	False	NA	NA	False	NA	NA	NA	16688707	16686583	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_16686843_16688551
ENSMUST00000232681.2	chr16	-	1371	4	FSM	ENSMUSG00000004462.8	ENSMUST00000232681.2	1371	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	30.539591789457	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATGCCTTTGTTAGGA	NA	False	NA	NA	False	NA	NA	NA	22676292	22644244	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_22644883_22652627_22652784_22660478_22660858_22676094
ENSMUST00000232687.2	chr17	-	694	4	FSM	ENSMUSG00000024067.15	ENSMUST00000232687.2	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	2414	junction_1	149.934059580278	7967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATAGTTGTTGTATA	NA	False	NA	-18	True	AATAAA	-16	NA	74623198	74606476	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038
ENSMUST00000232702.2	chr17	-	581	3	FSM	ENSMUSG00000055839.7	ENSMUST00000232702.2	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	11428	junction_1	404.5	30019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTACTGCATTTCTCATT	NA	False	NA	-10	True	AGTAAA	-11	NA	24048057	24043718	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24043954_24046441_24046548_24047817
ENSMUST00000232719.2	chr17	+	1431	2	FSM	ENSMUSG00000023906.4	ENSMUST00000232719.2	1431	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTGTCTGATGTCTCT	NA	False	NA	5	True	AATAAA	-19	NA	23898345	23901416	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_23898382_23900021
ENSMUST00000232751.2	chr17	-	1002	8	FSM	ENSMUSG00000004865.17	ENSMUST00000232751.2	1002	8	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_7	99.9697913555564	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGAGTGTTTTTATTT	NA	False	NA	NA	False	AGTAAA	-20	NA	28841425	28821449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ENSMUST00000232766.2	chr17	-	883	4	FSM	ENSMUSG00000024048.16	ENSMUST00000232766.2	883	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1388.00920586124	4448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTAGCGTTATTTGCCA	6427	False	NA	-12	True	ATTAAA	-21	NA	71305049	71301281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71305025
ENSMUST00000232770.2	chr17	+	1202	4	FSM	ENSMUSG00000037805.16	ENSMUST00000232770.2	1202	4	0	0	0	0	multi-exon	FALSE	canonical	3	5482	junction_2	1519.39724891155	5539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547589	28550006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_28547860_28547940_28548497_28549498_28549672_28549803
ENSMUST00000232784.2	chr17	+	3109	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1386	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTATGTCTCTCTGTTA	NA	False	NA	NA	False	AATATA	-16	NA	25403527	25406636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25403500_25406600
ENSMUST00000232870.2	chr16	-	1311	9	FSM	ENSMUSG00000022948.17	ENSMUST00000232870.2	1311	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	42.804789451649	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCAGACTGTCTTAG	NA	False	NA	-4	True	AATAAA	-18	NA	93396169	93380347	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390221_93393185_93393224_93396099
ENSMUST00000232874.2	chr17	+	3530	6	FSM	ENSMUSG00000005936.20	ENSMUST00000232874.2	3530	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	212.274727652634	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171444	29188523	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29171544_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ENSMUST00000232875.2	chr17	-	1342	7	FSM	ENSMUSG00000010592.10	ENSMUST00000232875.2	1342	7	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_2	40.7130882586369	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAATAATTTGGGAT	NA	False	NA	NA	False	NA	NA	NA	50600627	50592696	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ENSMUST00000232907.2	chr11	+	422	3	FSM	ENSMUSG00000086859.5	ENSMUST00000232907.2	422	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	299	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCATTGTTCAAT	707	False	NA	20	True	AATAAA	-16	NA	116967440	116969781	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116967588_116967933_116968029_116969601
ENSMUST00000232918.2	chr17	-	2735	5	FSM	ENSMUSG00000069743.6	ENSMUST00000232918.2	2735	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	16.8077363139716	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAAAATATAGTGAATGT	NA	False	NA	NA	False	NA	NA	NA	22064753	22036848	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_22039170_22040050_22040178_22042824_22042873_22059585_22059696_22064624
ENSMUST00000233068.2	chr17	+	2706	9	FSM	ENSMUSG00000024082.6	ENSMUST00000233068.2	2706	9	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_6	37.0202647208255	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAGTTGTCTGTAGAAC	NA	False	NA	NA	False	GATAAA	-19	NA	79244565	79255481	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724
ENSMUST00000233082.2	chr17	-	1587	4	FSM	ENSMUSG00000059409.10	ENSMUST00000233082.2	1587	4	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_2	38.0555150040335	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	46996252	46993916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46995304_46995431_46995505_46995590_46995693_46996227
ENSMUST00000233089.2	chr17	-	947	4	FSM	ENSMUSG00000024048.16	ENSMUST00000233089.2	947	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1388.00920586124	4315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTAGCGTTATTTGCCA	7174	False	NA	-12	True	ATTAAA	-21	NA	71304302	71301281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71304214
ENSMUST00000233105.2	chr17	+	594	3	FSM	ENSMUSG00000071172.14	ENSMUST00000233105.2	594	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACTAATGATATAAAGCAA	NA	False	NA	17	True	AATAAA	-31	NA	29258667	29260705	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29258884_29259748_29259788_29260366
ENSMUST00000233121.2	chr17	-	2793	8	FSM	ENSMUSG00000023980.8	ENSMUST00000233121.2	2793	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	41.4984632122636	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATAGGGCCTCTCAAAT	NA	False	NA	-4	True	AATAAA	-31	NA	47813212	47799206	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ENSMUST00000233129.2	chr17	-	981	9	FSM	ENSMUSG00000004865.17	ENSMUST00000233129.2	981	9	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_8	93.865595401084	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTGCTGAGGCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	28841425	28819677	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ENSMUST00000233136.2	chr17	-	1289	7	FSM	ENSMUSG00000023971.10	ENSMUST00000233136.2	1289	7	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_2	28.055995596109	1358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	46985278	46978386	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ENSMUST00000233155.2	chr17	-	2274	7	FSM	ENSMUSG00000023971.10	ENSMUST00000233155.2	2274	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	160.801551263938	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCTTGCATCAGCCTGC	NA	False	NA	-3	True	NA	NA	NA	46985213	46977249	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46978160_46978360_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983774_46985122
ENSMUST00000233174.2	chr17	-	1263	8	FSM	ENSMUSG00000023980.8	ENSMUST00000233174.2	1263	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	61.3926805449135	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTATTTATTATTATA	NA	False	NA	NA	False	AATAAA	-19	NA	47813212	47794288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47794760_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ENSMUST00000233187.2	chr17	-	512	4	FSM	ENSMUSG00000024067.15	ENSMUST00000233187.2	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	1032.98047738893	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTATAGTTGTTGTA	NA	False	NA	-20	True	AATAAA	-14	NA	74623389	74606478	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_74606820_74622896_74622945_74623038_74623112_74623339
ENSMUST00000233190.2	chr17	+	2913	18	FSM	ENSMUSG00000000127.16	ENSMUST00000233190.2	2913	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	54.7259292807362	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGGACTTCCTAGGGT	NA	False	NA	NA	False	TATAAA	-20	NA	64185060	64446491	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_64185138_64203012_64203279_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ENSMUST00000233192.2	chr17	-	1310	6	FSM	ENSMUSG00000063888.8	ENSMUST00000233192.2	1310	6	0	0	0	0	multi-exon	FALSE	canonical	3	2131	junction_4	73.7276067697847	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCCTAAATCTCTTTATC	NA	False	NA	NA	False	NA	NA	NA	47093582	47088443	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ENSMUST00000233197.2	chr17	+	4196	8	FSM	ENSMUSG00000005936.20	ENSMUST00000233197.2	4196	8	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_2	164.609370626217	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171231	29188523	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29171544_29176852_29177032_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ENSMUST00000233248.2	chr17	-	2820	11	FSM	ENSMUSG00000010592.10	ENSMUST00000233248.2	2820	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	161.906269180659	1361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGACTTACTGTCCTG	NA	False	NA	-3	True	AATAAA	-18	NA	50599920	50586422	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_50588340_50590155_50590255_50591265_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50599848
ENSMUST00000233299.2	chr17	-	788	4	FSM	ENSMUSG00000049760.7	ENSMUST00000233299.2	788	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	987.838493322106	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGGGAATGGTCCCCA	NA	False	NA	-42	True	AATAAA	-1	NA	56916680	56914636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56914842_56915637_56915693_56915845_56916333_56916639
ENSMUST00000233319.2	chr17	+	2567	17	FSM	ENSMUSG00000002372.10	ENSMUST00000233319.2	2567	17	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	111.513574706176	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980364	57018764	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ENSMUST00000233417.2	chr17	-	636	4	FSM	ENSMUSG00000117098.2	ENSMUST00000233417.2	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	1383	junction_1	721.629175315596	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGCGGCGGCTGACACG	2273	False	NA	NA	False	NA	NA	NA	71309203	71281317	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_71281492_71303104_71303267_71303691_71303891_71309102
ENSMUST00000233426.2	chr17	+	590	3	FSM	ENSMUSG00000040771.15	ENSMUST00000233426.2	590	3	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	344	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCAGTCTCTTCGCCCT	NA	False	NA	NA	False	ACTAAA	-18	NA	48717119	48718658	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_48717266_48717855_48717933_48718291
ENSMUST00000233427.2	chr17	+	729	6	FSM	ENSMUSG00000037805.16	ENSMUST00000233427.2	729	6	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	3247.70076207769	139034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547541	28550006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_28547593_28547787_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
ENSMUST00000233430.2	chr17	+	945	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233430.2	945	4	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_1	155.5913450892	2640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCACACCGCCTGTGCT	NA	False	NA	-4	True	AATAAA	-21	NA	46991911	46994028	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_46992089_46992542_46992824_46992934_46993038_46993644
ENSMUST00000233465.2	chr17	-	3474	6	FSM	ENSMUSG00000117284.2	ENSMUST00000233465.2	3474	6	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_5	14.9853261559434	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22533818	22504851	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_22507883_22508749_22508877_22511388_22511437_22528485_22528579_22532217_22532302_22533727
ENSMUST00000233474.2	chr17	-	2004	19	FSM	ENSMUSG00000073460.6	ENSMUST00000233474.2	2004	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	33.1558701951112	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTACATGGCCAGTGC	2974	False	NA	-8	True	GATAAA	-20	NA	13128833	13107615	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113499_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
ENSMUST00000233483.2	chr17	-	442	3	FSM	ENSMUSG00000055839.7	ENSMUST00000233483.2	442	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	5701	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACTTTTCTGTTCCCTCT	NA	False	NA	-31	True	AATAAA	-23	NA	24047777	24043777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24043954_24046441_24046548_24047617
ENSMUST00000233494.2	chr17	-	1597	12	FSM	ENSMUSG00000038781.8	ENSMUST00000233494.2	1597	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	11.576550821623	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGCCATGTGGCTGTA	NA	False	NA	-9	True	NA	NA	NA	56312573	56304081	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_56304362_56304459_56304535_56304604_56304698_56304777_56304952_56306742_56307016_56307086_56307157_56307479_56307615_56307900_56308002_56309011_56309069_56309852_56309976_56310129_56310202_56312429
ENSMUST00000233519.2	chr17	-	414	4	FSM	ENSMUSG00000055839.7	ENSMUST00000233519.2	414	4	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_3	5439.43761390418	5700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGACTTTTCTGTTC	NA	False	NA	-36	True	AATAAA	-18	NA	24048088	24043782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24043954_24046441_24046548_24047817_24047923_24048056
ENSMUST00000233548.2	chr17	-	1666	19	FSM	ENSMUSG00000073460.6	ENSMUST00000233548.2	1666	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	42.6386264921351	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCCACCTCAGCTTCT	2920	False	NA	NA	False	NA	NA	NA	13128887	13107788	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_13107857_13108962_13109062_13109165_13109316_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116221_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
ENSMUST00000233549.2	chr17	+	2749	10	FSM	ENSMUSG00000007603.10	ENSMUST00000233549.2	2749	10	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_2	26.7830792354676	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCTCTCCTTGTGA	9250	False	NA	12	True	NA	NA	NA	57071783	57077093	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ENSMUST00000233553.2	chr17	-	997	8	FSM	ENSMUSG00000023935.11	ENSMUST00000233553.2	997	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	5.17450579322138	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTTTGTAATATGGT	NA	False	NA	NA	False	NA	NA	NA	45785752	45756805	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45757010_45760360_45760477_45763603_45763667_45765016_45765138_45768083_45768246_45772087_45772237_45775352_45775507_45785724
ENSMUST00000233566.2	chr16	+	2415	4	FSM	ENSMUSG00000023147.18	ENSMUST00000233566.2	2415	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	163.242832069963	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGTACTGTGGAAAGCG	NA	False	NA	24	True	AATAAA	-18	NA	95946612	95959046	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_95946779_95953012_95953179_95955280_95955396_95957078
ENSMUST00000233581.2	chr17	-	734	5	FSM	ENSMUSG00000024067.15	ENSMUST00000233581.2	734	5	0	0	0	0	multi-exon	FALSE	canonical	3	1923	junction_4	306.562391692132	11534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTTGTATATGACAAGT	NA	False	NA	-10	True	AATAAA	-24	NA	74623458	74606468	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038_74623112_74623339
ENSMUST00000233593.2	chr17	-	578	5	FSM	ENSMUSG00000055839.7	ENSMUST00000233593.2	578	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	5034.57517448096	22601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCATTTCTCATTTTTAT	NA	False	NA	-5	True	AGTAAA	-16	NA	24048072	24043713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24043954_24045559_24045641_24046441_24046548_24047817_24047953_24048056
ENSMUST00000233715.2	chr17	-	1410	10	FSM	ENSMUSG00000067144.8	ENSMUST00000233715.2	1410	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	12.0718016493698	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGATGGAGCTGCTACTG	3645	False	NA	NA	False	AATAGA	-40	NA	46748555	46743338	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46743444_46743872_46744080_46744500_46744610_46744774_46744990_46745474_46745585_46745810_46745935_46747734_46747904_46748004_46748160_46748248_46748353_46748443
ENSMUST00000233769.2	chr17	-	975	7	FSM	ENSMUSG00000023935.11	ENSMUST00000233769.2	975	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	6.15539510420646	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTGTAATATGGTATT	NA	False	NA	NA	False	NA	NA	NA	45785790	45756802	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_45757010_45760360_45760477_45765016_45765138_45768083_45768246_45772087_45772237_45775352_45775507_45785724
ENSMUST00000233792.2	chr17	-	1931	8	FSM	ENSMUSG00000023832.15	ENSMUST00000233792.2	1931	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	366.747758503507	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTTGTCAGTGAGTT	NA	False	NA	0	True	NA	NA	NA	13179607	13161924	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ENSMUST00000233796.2	chr17	-	512	3	FSM	ENSMUSG00000055839.7	ENSMUST00000233796.2	512	3	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_2	5708.5	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACTTTTCTGTTCCCTCT	NA	False	NA	-31	True	AATAAA	-23	NA	24047785	24043777	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24043954_24046441_24046548_24047555
ENSMUST00000233798.2	chr17	-	906	4	FSM	ENSMUSG00000024048.16	ENSMUST00000233798.2	906	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1388.00920586124	4369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTAGCGTTATTTGCCA	5918	False	NA	-12	True	ATTAAA	-21	NA	71305558	71301281	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71305511
ENSMUST00000233812.2	chr17	+	1045	3	FSM	ENSMUSG00000023908.9	ENSMUST00000233812.2	1045	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	242.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	405	False	NA	34	True	AAAAAG	-45	NA	23953700	23955709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_23954347_23954536_23954695_23955468
ENSMUST00000233832.2	chr17	+	493	4	FSM	ENSMUSG00000002379.8	ENSMUST00000233832.2	493	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	1185.6477835625	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAAAGGCAGGCTTG	NA	False	NA	22	True	AATAAA	-22	NA	57024782	57029141	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_57024943_57028034_57028128_57028358_57028442_57028984
ENSMUST00000233857.2	chr17	-	366	3	FSM	ENSMUSG00000055839.7	ENSMUST00000233857.2	366	3	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_2	5504	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGACTTTTCTGTTCCCTC	NA	False	NA	-32	True	AATAAA	-22	NA	24047805	24043778	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24043954_24046441_24046548_24047720
ENSMUST00000233895.2	chr17	+	546	5	FSM	ENSMUSG00000037805.16	ENSMUST00000233895.2	546	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3518.24309847969	1961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCCTTGGTGTGCCTGT	NA	False	NA	-4	True	AATAAA	-15	NA	28547550	28550002	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549803
ENSMUST00000233916.2	chr17	+	1473	6	FSM	ENSMUSG00000024084.9	ENSMUST00000233916.2	1473	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	82.0351144327842	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAATTTATTTTCATGT	NA	False	NA	11	True	ATTAAA	-20	NA	79359616	79397650	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_79359818_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
ENSMUST00000233937.2	chr17	+	634	5	FSM	ENSMUSG00000037805.16	ENSMUST00000233937.2	634	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3056.76147049455	3544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGCCACTCAGCCTT	NA	False	NA	-15	True	AATAAA	-4	NA	28547543	28549991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_28547593_28547784_28547860_28548347_28548497_28549498_28549672_28549803
ENSMUST00000233974.2	chr17	-	2313	16	FSM	ENSMUSG00000003546.11	ENSMUST00000233974.2	2313	16	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_15	23.4960043884534	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCGGAGTCTTCATTG	NA	False	NA	-2	True	AATAAA	-18	NA	46956948	46941549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956900
ENSMUST00000233988.2	chr17	-	3038	15	FSM	ENSMUSG00000059409.10	ENSMUST00000233988.2	3038	15	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_14	104.207504919908	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1000	False	NA	NA	False	AATAAA	-15	NA	47016037	46993916	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011076_47015758
ENSMUST00000234017.2	chr17	-	1443	1	FSM	ENSMUSG00000067288.14	ENSMUST00000234017.2	1443	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	953	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTGTCTAGAAATTGG	NA	False	NA	-27	True	AATAAA	-12	NA	34043468	34042025	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34042000_34043500
ENSMUST00000234028.2	chr17	+	1270	9	FSM	ENSMUSG00000052712.18	ENSMUST00000234028.2	1270	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	118.386813032533	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATGGGTTGGTTGCTTA	484	False	NA	14	True	AATAAA	-15	NA	29487934	29520498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515536_29515664_29517615_29517740_29520329
ENSMUST00000234036.2	chr17	-	1625	6	FSM	ENSMUSG00000024127.16	ENSMUST00000234036.2	1625	6	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	17.1043854025802	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTTAAAAAAAAAATGTG	NA	False	NA	NA	False	AATAAA	-38	NA	85397659	85385486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
ENSMUST00000234046.2	chr5	-	947	2	FSM	ENSMUSG00000072694.9	ENSMUST00000234046.2	947	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTCTTGTGGGTGAT	9593	False	NA	2	True	NA	NA	NA	114961529	114959995	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_114960787_114961373
ENSMUST00000234098.2	chr17	-	1440	7	FSM	ENSMUSG00000039183.7	ENSMUST00000234098.2	1440	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	254.994553318737	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAAGGTGTCTGTCTTGT	NA	False	NA	-6	True	AGTAAA	-24	NA	25105321	25101585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25102289_25102779_25102864_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
ENSMUST00000234107.2	chr18	+	2422	8	FSM	ENSMUSG00000024317.16	ENSMUST00000234107.2	2422	8	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	133.739008703443	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTGTAAAAAACCTTTT	NA	False	NA	10	True	AATAAA	-21	NA	21134397	21160592	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ENSMUST00000234118.2	chr18	-	2494	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234118.2	2494	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	102.439937663015	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12987516	12888384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12987471
ENSMUST00000234175.2	chr17	-	2749	12	FSM	ENSMUSG00000024187.16	ENSMUST00000234175.2	2749	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	62.3582027847616	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCGTGAGCCTGCAGT	1900	False	NA	-17	True	AATAAA	-31	NA	26463216	26431683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462963
ENSMUST00000234186.2	chr18	+	2110	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234186.2	2110	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	58.8005102018681	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTAGTATCTATTTTCT	-12	True	NA	18	True	AATAAA	-20	NA	4375591	4396785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383184_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUST00000234194.2	chr18	-	2489	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234194.2	2489	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	102.439937663015	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12988321	12888384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12988281
ENSMUST00000234207.2	chr18	+	439	4	FSM	ENSMUSG00000002477.6	ENSMUST00000234207.2	439	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	847.378047600689	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAAGTGTAGGGACAGA	-11	True	NA	2	True	NA	NA	NA	10617795	10627955	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_10617927_10623630_10623708_10626948_10627018_10627793
ENSMUST00000234235.2	chr17	-	682	3	FSM	ENSMUSG00000040888.11	ENSMUST00000234235.2	682	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	299	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTGATTTCTGGATGTA	NA	False	NA	6	True	ATTAAA	-27	NA	24915064	24913158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24913417_24914227_24914392_24914804
ENSMUST00000234240.2	chr17	-	1323	1	FSM	ENSMUSG00000117499.2	ENSMUST00000234240.2	1323	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCATTGCTATCATCTT	NA	False	NA	-3	True	AATAAA	-19	NA	95123491	95122168	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_95122200_95123500
ENSMUST00000234258.2	chr17	-	592	3	FSM	ENSMUSG00000024248.15	ENSMUST00000234258.2	592	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCATTCGTGGCCAGCC	7118	False	NA	NA	False	NA	NA	NA	83824759	83809758	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_83810167_83811528_83811658_83824704
ENSMUST00000234261.2	chr17	-	1221	6	FSM	ENSMUSG00000039183.7	ENSMUST00000234261.2	1221	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	327.65310924818	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAAGGTGTCTGTCTTGT	NA	False	NA	-6	True	AGTAAA	-24	NA	25105289	25101585	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104692_25104838_25105252
ENSMUST00000234262.2	chr17	-	2774	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234262.2	2774	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	57.1286924408392	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGATGTCTTTCTG	1974	False	NA	2	True	NA	NA	NA	26463142	26431664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462979
ENSMUST00000234293.2	chr17	-	1191	6	FSM	ENSMUSG00000039183.7	ENSMUST00000234293.2	1191	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	321.432419024591	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCAAGGTGTCTG	NA	False	NA	-12	True	AGTAAA	-18	NA	25105303	25101591	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104692_25104812_25105264
ENSMUST00000234295.2	chr17	+	3079	4	FSM	ENSMUSG00000095193.3	ENSMUST00000234295.2	3079	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	17.6635217326557	541	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTCGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	95172345	95185749	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_95172441_95181413_95181541_95181729_95181791_95182953
ENSMUST00000234304.2	chr17	+	1137	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	41.5508390074403	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTAGCTCTTGTGTTC	4840	False	NA	11	True	TATAAA	-24	NA	24645614	24658294	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ENSMUST00000234308.2	chr17	+	2084	6	FSM	ENSMUSG00000041429.4	ENSMUST00000234308.2	2084	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	84.8042451767599	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTGGCCCGTTGGCT	906	False	NA	10	True	AATAAA	-22	NA	24851653	24857810	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24852833_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
ENSMUST00000234344.2	chr18	+	2416	6	FSM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_4	31.1088411870323	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCACTGTTAGAATCT	5733	False	NA	7	True	AATAAA	-18	NA	31937228	31968475	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
ENSMUST00000234352.2	chr17	-	1224	6	FSM	ENSMUSG00000039183.7	ENSMUST00000234352.2	1224	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	254.082191426318	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCAAGGTGTCTGT	NA	False	NA	-11	True	AGTAAA	-19	NA	25105323	25101590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104692_25104812_25105252
ENSMUST00000234357.2	chr17	+	1640	10	FSM	ENSMUSG00000042099.17	ENSMUST00000234357.2	1640	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	109.894674603335	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	4519	False	NA	12	True	AATAAA	-15	NA	34036880	34041891	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34036986_34037166_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ENSMUST00000234362.2	chr17	+	1780	9	FSM	ENSMUSG00000090083.12	ENSMUST00000234362.2	1780	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	87.2496418330757	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGCTCAGCTGGGCTTC	NA	False	NA	16	True	AATAAA	-15	NA	29833941	29860623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29834053_29840482_29840612_29845479_29845817_29845920_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ENSMUST00000234380.2	chr17	-	715	6	FSM	ENSMUSG00000008668.16	ENSMUST00000234380.2	715	6	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_3	10301.0144238322	58150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174637	34170972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34172713_34172883_34174051_34174151_34174591
ENSMUST00000234422.2	chr18	+	2626	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234422.2	2626	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	58.5340445809103	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGATAACAGTATTTC	-8	True	NA	15	True	AATAAA	-16	NA	4375595	4397328	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_4375779_4379568_4379742_4380672_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUST00000234426.2	chr17	+	646	5	FSM	ENSMUSG00000042099.17	ENSMUST00000234426.2	646	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	140.074979921469	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGACCTAACCATCTTAG	NA	False	NA	NA	False	NA	NA	NA	34029492	34041155	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34029540_34035159_34035220_34038753_34038971_34040742_34040889_34040979
ENSMUST00000234503.2	chr17	-	1991	9	FSM	ENSMUSG00000024097.12	ENSMUST00000234503.2	1991	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	890.532565378718	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCATGTTTGAGGA	NA	False	NA	NA	False	NA	NA	NA	80514736	80508258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512050_80512511_80512690_80512868_80513276_80513458_80514603
ENSMUST00000234506.2	chr17	+	1417	4	FSM	ENSMUSG00000002308.17	ENSMUST00000234506.2	1417	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_3	11.8977121983832	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCTAGCCTGTTT	7055	False	NA	23	True	ATTAAA	-16	NA	34062126	34067727	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34062266_34064989_34065116_34066468_34067153_34067259
ENSMUST00000234520.2	chr17	-	1177	4	FSM	ENSMUSG00000040888.11	ENSMUST00000234520.2	1177	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	273.584843634779	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCTGGTTTCTGTGTGCT	NA	False	NA	-10	True	AATAAA	-14	NA	24915086	24912163	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24912587_24913141_24913417_24914227_24914425_24914804
ENSMUST00000234524.2	chr18	-	2603	9	FSM	ENSMUSG00000037013.18	ENSMUST00000234524.2	2603	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	300.413048984228	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATAAATTATTTGTGA	NA	False	NA	-45	True	TTTAAA	-19	NA	14815823	14758711	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ENSMUST00000234530.2	chr17	-	2001	10	FSM	ENSMUSG00000056121.17	ENSMUST00000234530.2	2001	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	144.531255964297	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGAGTCTTGAGTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	78725512	78685313	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_78686175_78687298_78687328_78689036_78689103_78692172_78692249_78694419_78694501_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
ENSMUST00000234554.2	chr17	-	2828	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234554.2	2828	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	57.1286924408392	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGATGTCTTTCTG	1920	False	NA	2	True	NA	NA	NA	26463196	26431664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462979
ENSMUST00000234559.2	chr18	+	1023	4	FSM	ENSMUSG00000024273.9	ENSMUST00000234559.2	1023	4	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	19.3620476419435	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACCAACGGAGCAGAAGG	341	False	NA	-94	True	NA	NA	NA	24603907	24610714	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_24604142_24606006_24606207_24608581_24608782_24610325
ENSMUST00000234579.2	chr17	-	1445	7	FSM	ENSMUSG00000039183.7	ENSMUST00000234579.2	1445	7	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_6	253.310580118557	1752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAAGGTGTCTGTCTTGTT	NA	False	NA	-5	True	AGTAAA	-25	NA	25105313	25101584	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104838_25105252
ENSMUST00000234633.2	chr18	+	515	1	FSM	ENSMUSG00000117621.2	ENSMUST00000234633.2	515	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11756	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATAAAATGATGTAAATG	NA	False	NA	NA	False	NA	NA	NA	47245205	47245720	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_47245200_47245700
ENSMUST00000234665.2	chr17	+	1794	3	FSM	ENSMUSG00000024014.9	ENSMUST00000234665.2	1794	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	939.5	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29712010	29715082	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29712109_29712695_29712873_29713563
ENSMUST00000234687.2	chr17	-	2833	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234687.2	2833	13	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_12	40.5798253103956	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCGTGAGCCTGCAGT	1928	False	NA	-17	True	AATAAA	-31	NA	26463188	26431683	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
ENSMUST00000234696.2	chr17	-	987	7	FSM	ENSMUSG00000024097.12	ENSMUST00000234696.2	987	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	923.958693160396	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514732	80508738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_80509032_80510119_80510174_80511583_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUST00000234773.2	chr17	+	1367	9	FSM	ENSMUSG00000052712.18	ENSMUST00000234773.2	1367	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	116.357208629289	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGTTGGTTGCTTAGTT	1246	False	NA	17	True	AATAAA	-18	NA	29488696	29520501	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29488830_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUST00000234793.2	chr18	+	785	2	FSM	ENSMUSG00000024423.7	ENSMUST00000234793.2	785	2	0	0	0	0	multi-exon	FALSE	canonical	3	891	junction_1	0	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCATGGAGTGATAGTTT	NA	False	NA	NA	False	NA	NA	NA	13122721	13124119	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_13122937_13123549
ENSMUST00000234851.2	chr17	+	1307	7	FSM	ENSMUSG00000061130.14	ENSMUST00000234851.2	1307	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	703.024596535095	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGTACATAGAAGAACAA	NA	False	NA	-22	True	NA	NA	NA	85301107	85331207	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836_85322864_85330459_85330508_85331123
ENSMUST00000234889.2	chr17	-	1898	7	FSM	ENSMUSG00000024097.12	ENSMUST00000234889.2	1898	7	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	729.529623951092	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514733	80508738	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80512868_80513276_80513458_80514603
ENSMUST00000234893.2	chr17	-	591	2	FSM	ENSMUSG00000059208.16	ENSMUST00000234893.2	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	2194	junction_1	0	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	NA	False	NA	-5	True	AATAAA	-16	NA	33867953	33865209	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_33865634_33867786
ENSMUST00000234901.2	chr18	+	1875	14	FSM	ENSMUSG00000024287.9	ENSMUST00000234901.2	1875	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	213.882564692146	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	5614	False	NA	14	True	AATAAA	-14	NA	9963803	9993725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUST00000234910.2	chr18	+	2257	5	FSM	ENSMUSG00000073568.3	ENSMUST00000234910.2	2257	5	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	19.1441897190766	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGGGTTTCTTTTTTC	NA	False	NA	26	True	AATAAA	-22	NA	47054881	47067299	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_47054960_47059048_47059157_47059378_47059483_47061585_47061726_47065472
ENSMUST00000234941.2	chr17	-	3223	9	FSM	ENSMUSG00000024142.16	ENSMUST00000234941.2	3223	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	26.8234971620033	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9610	False	NA	0	True	AATAAA	-17	NA	24698029	24692524	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697339_24697985
ENSMUST00000234961.2	chr18	+	792	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234961.2	792	6	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_5	518.443593846042	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACTTTATAAATATTT	NA	False	NA	-11	True	TTTAAA	-1	NA	47091927	47168874	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47168619
ENSMUST00000234968.2	chr17	-	1502	7	FSM	ENSMUSG00000039183.7	ENSMUST00000234968.2	1502	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	246.820953999723	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCAAGGTGTCTGT	NA	False	NA	-11	True	AGTAAA	-19	NA	25105307	25101590	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25102384_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
ENSMUST00000234977.2	chr17	+	1769	8	FSM	ENSMUSG00000034681.18	ENSMUST00000234977.2	1769	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	570.995335768505	2685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGTTTTACTGTCTG	889	False	NA	NA	False	AATAAA	-24	NA	24633624	24644875	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_24633709_24634014_24634137_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUST00000235017.2	chr18	+	4030	21	FSM	ENSMUSG00000024260.15	ENSMUST00000235017.2	4030	21	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_13	32.249767441022	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGAGCAGTTTGCCTCT	6805	False	NA	8	True	AATAAA	-20	NA	31767423	31856114	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ENSMUST00000235023.2	chr17	+	1285	9	FSM	ENSMUSG00000052712.18	ENSMUST00000235023.2	1285	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	116.357208629289	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATGGGTTGGTTGCTTA	192	False	NA	14	True	AATAAA	-15	NA	29492364	29520498	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29492419_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUST00000235025.2	chr18	+	922	4	FSM	ENSMUSG00000024234.8	ENSMUST00000235025.2	922	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	82.9471049658891	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTAGTGATTATTTC	-1	True	NA	NA	False	ATTAAA	-11	NA	4375602	4383523	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383184
ENSMUST00000235027.2	chr18	-	2531	14	FSM	ENSMUSG00000044252.19	ENSMUST00000235027.2	2531	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	102.439937663015	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12994262	12888384	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12994180
ENSMUST00000235029.2	chr18	+	1146	5	FSM	ENSMUSG00000024273.9	ENSMUST00000235029.2	1146	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	81.3910314469598	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAATGGTAGTATTTAATT	340	False	NA	17	True	GATAAA	-14	NA	24603906	24610855	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_24604038_24604118_24604204_24606006_24606207_24608581_24608782_24610325
ENSMUST00000235036.2	chr17	-	1921	7	FSM	ENSMUSG00000024097.12	ENSMUST00000235036.2	1921	7	0	0	0	0	multi-exon	FALSE	canonical	3	1059	junction_3	429.146601472685	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTTGATTTTTGTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	80514734	80508740	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80512868_80513276_80513458_80514603
ENSMUST00000235050.2	chr17	+	773	6	FSM	ENSMUSG00000052712.18	ENSMUST00000235050.2	773	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	140.841187157735	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGGTTGCTTAGTTAC	476	False	NA	19	True	AATAAA	-20	NA	29487926	29520503	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29487977_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUST00000235069.2	chr17	-	1040	8	FSM	ENSMUSG00000024097.12	ENSMUST00000235069.2	1040	8	0	0	0	0	multi-exon	FALSE	canonical	3	1059	junction_3	412.241508371597	4275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGATGTTTTGATTTTT	NA	False	NA	-14	True	AATAAA	-9	NA	80514732	80508745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUST00000235114.2	chr17	+	1073	8	FSM	ENSMUSG00000052712.18	ENSMUST00000235114.2	1073	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	114.986245850075	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCATGGGTTGGTTGCT	468	False	NA	12	True	AATAAA	-13	NA	29487918	29520496	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUST00000235144.2	chr17	-	1026	8	FSM	ENSMUSG00000024033.11	ENSMUST00000235144.2	1026	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	21.3101489666213	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAATGAGCCTCTGATGT	NA	False	NA	-7	True	AATAAA	-20	NA	31496312	31473998	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_31474194_31477071_31477201_31477761_31477922_31480728_31480801_31484787_31484924_31485316_31485408_31492290_31492397_31496175
ENSMUST00000235160.2	chr19	+	3301	11	FSM	ENSMUSG00000010663.6	ENSMUST00000235160.2	3301	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	244.492126662598	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTATTCATTTGAAAT	NA	False	NA	21	True	AATAAA	-22	NA	10160302	10174241	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10160629_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ENSMUST00000235165.2	chr18	+	2349	18	FSM	ENSMUSG00000024474.8	ENSMUST00000235165.2	2349	18	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_12	177.004818811107	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877730	36890688	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888478_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ENSMUST00000235171.2	chr17	-	898	6	FSM	ENSMUSG00000024026.14	ENSMUST00000235171.2	898	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	1306.85751327373	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAACAGCTCCCTTTAGAG	NA	False	NA	NA	False	NA	NA	NA	30831576	30812839	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_30813201_30815347_30815438_30816778_30816867_30819012_30819154_30822993_30823077_30831441
ENSMUST00000235205.2	chr17	-	4183	13	FSM	ENSMUSG00000024045.7	ENSMUST00000235205.2	4183	13	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_6	70.5212241495818	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGTTCATTAATTAC	NA	False	NA	-1	True	AATAAA	-16	NA	32540212	32522645	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32536321_32536819_32536853_32537744_32537784_32540058
ENSMUST00000235243.2	chr19	-	997	4	FSM	ENSMUSG00000024668.9	ENSMUST00000235243.2	997	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	80.2426874480715	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATTGAGGCAAACTTTC	NA	False	NA	0	True	NA	NA	NA	10502456	10479707	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10480494_10494343_10494454_10494683_10494751_10502422
ENSMUST00000235271.2	chr19	+	2661	8	FSM	ENSMUSG00000034445.9	ENSMUST00000235271.2	2661	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	32.1856857523176	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCTCTTTTGTTCAGA	NA	False	NA	14	True	ATTAAA	-17	NA	10554814	10567193	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10555258_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ENSMUST00000235274.2	chr19	+	3788	24	FSM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	0	0	0	0	multi-exon	FALSE	canonical	3	708	junction_5	142.157557894544	1883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	1899	False	NA	-56	True	GATAAA	-42	NA	8875470	8894036	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ENSMUST00000235277.2	chr18	+	1586	2	FSM	ENSMUSG00000117869.2	ENSMUST00000235277.2	1586	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATACTTATTTTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	35686474	35689017	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35686523_35687479
ENSMUST00000235295.2	chr19	+	1643	3	FSM	ENSMUSG00000035372.3	ENSMUST00000235295.2	1643	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	146.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCTTGTGTGGGTCTGT	NA	False	NA	8	True	ATTAAA	-20	NA	3758346	3767878	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_3758437_3765637_3765803_3766490
ENSMUST00000235305.2	chr19	+	855	7	FSM	ENSMUSG00000025090.10	ENSMUST00000235305.2	855	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	14.1273965518539	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTAAGTTGGTCTGTCC	NA	False	NA	NA	False	ACTAAA	-5	NA	58500423	58541517	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_58500459_58500742_58500868_58501047_58501134_58514279_58514397_58515703_58515870_58539855_58539948_58541283
ENSMUST00000235306.2	chr19	+	645	3	FSM	ENSMUSG00000024854.5	ENSMUST00000235306.2	645	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	2.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTGACCTTACATCTC	NA	False	NA	3	True	AATAAA	-15	NA	4282491	4283685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4282607_4282801_4282914_4283267
ENSMUST00000235307.2	chr18	+	1747	1	FSM	ENSMUSG00000059040.6	ENSMUST00000235307.2	1747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43708	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	AATAAA	-30	NA	48179713	48181460	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_48179700_48181500
ENSMUST00000235315.2	chr17	-	414	1	FSM	ENSMUSG00000117962.2	ENSMUST00000235315.2	414	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	403	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTATGCCATATTTTCA	9280	False	NA	NA	False	NA	NA	NA	30615007	30614593	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_30614600_30615000
ENSMUST00000235318.2	chr17	-	1863	8	FSM	ENSMUSG00000036775.14	ENSMUST00000235318.2	1863	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	63.4282496774336	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCTTGTGTTTCCTGTC	NA	False	NA	-1	True	NA	NA	NA	26307646	26300181	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307567
ENSMUST00000235327.2	chr17	-	1267	4	FSM	ENSMUSG00000057411.10	ENSMUST00000235327.2	1267	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	24.4449494897321	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTGTTTGTTCC	8392	False	NA	-7	True	AATAAA	-17	NA	26011347	26009479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545
ENSMUST00000235377.2	chr19	-	2705	2	FSM	ENSMUSG00000118064.2	ENSMUST00000235377.2	2705	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	639	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAGGAATAACAGTGT	9759	False	NA	NA	False	NA	NA	NA	32186673	32181581	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_32184172_32186558
ENSMUST00000235400.2	chr18	+	1522	5	FSM	ENSMUSG00000037058.17	ENSMUST00000235400.2	1522	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	1449.29120607282	3870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCTGGTGCTTGTGTTAT	4672	False	NA	19	True	AATAAA	-13	NA	35731701	35750236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35731813_35741790_35741873_35743923_35744088_35746375_35746556_35749251
ENSMUST00000235412.2	chr19	-	3771	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGCCTCTCTTAAAG	NA	False	NA	NA	False	AATAAA	-21	NA	32689731	32649037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ENSMUST00000235429.2	chr17	-	2149	2	FSM	ENSMUSG00000117916.2	ENSMUST00000235429.2	2149	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTCCGACTTGGGTT	6249	False	NA	-9	True	NA	NA	NA	27461633	27454048	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27456112_27461547
ENSMUST00000235432.2	chr18	-	1672	15	FSM	ENSMUSG00000024493.10	ENSMUST00000235432.2	1672	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	692.230128656943	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATTTAAGAGGATTTTA	NA	False	NA	NA	False	NA	NA	NA	42395194	42367672	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42382386_42382492_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ENSMUST00000235442.2	chr17	-	1130	4	FSM	ENSMUSG00000024194.17	ENSMUST00000235442.2	1130	4	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_3	309.969174094601	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9300	False	NA	-17	True	AATAAA	-18	NA	27158495	27156945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27157151_27157391_27157761_27157857_27158343_27158424
ENSMUST00000235455.2	chr18	+	1905	4	FSM	ENSMUSG00000057561.11	ENSMUST00000235455.2	1905	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	698.014804045492	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCTTTTTAATATGTT	NA	False	NA	17	True	AATAAA	-18	NA	46730821	46742245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_46730868_46731707_46731768_46732343_46732468_46740570
ENSMUST00000235476.2	chr18	+	1569	7	FSM	ENSMUSG00000037058.17	ENSMUST00000235476.2	1569	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1378.81757918394	2861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGCTTGTGTTATTGGT	5607	False	NA	23	True	AATAAA	-17	NA	35732636	35750240	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35732672_35732765_35732812_35733097_35733171_35741790_35741873_35743923_35744088_35746375_35746556_35749251
ENSMUST00000235484.2	chr17	-	1498	5	FSM	ENSMUSG00000039615.10	ENSMUST00000235484.2	1498	5	0	0	0	0	multi-exon	FALSE	canonical	3	1486	junction_1	49.4115371143218	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCATGTGCTGGTGCA	6787	False	NA	-19	True	AATAAA	-15	NA	26051893	26049609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26049985_26050075_26050606_26050769_26050936_26051019_26051219_26051665
ENSMUST00000235489.2	chr19	-	1104	2	FSM	ENSMUSG00000025035.10	ENSMUST00000235489.2	1104	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	46561515	46556344	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_46557412_46561478
ENSMUST00000235520.2	chr19	-	1311	3	FSM	ENSMUSG00000007338.11	ENSMUST00000235520.2	1311	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	445.5	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACGGTGTTCAGAACCT	NA	False	NA	-15	True	ATTAAA	-15	NA	6107788	6103926	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6105013_6105105_6105231_6107688
ENSMUST00000235564.2	chr17	+	2529	19	FSM	ENSMUSG00000024036.17	ENSMUST00000235564.2	2529	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	27.2625551550152	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGCCCAC	4658	False	NA	NA	False	AATAAA	-13	NA	31524848	31569669	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_31524940_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ENSMUST00000235590.2	chr18	-	2085	6	FSM	ENSMUSG00000052102.16	ENSMUST00000235590.2	2085	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	488.205448556241	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTTTGTGAATTTTG	NA	False	NA	-22	True	AATAAA	-2	NA	38472029	38460602	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_38462027_38463538_38463714_38466206_38466390_38468068_38468171_38471143_38471276_38471960
ENSMUST00000235606.2	chr18	-	868	7	FSM	ENSMUSG00000056671.8	ENSMUST00000235606.2	868	7	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_2	31.5722275988812	1480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTTTCTCCAAATGT	NA	False	NA	-14	True	AATAAA	-23	NA	42084307	42008664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
ENSMUST00000235619.2	chr18	-	1524	9	FSM	ENSMUSG00000024357.11	ENSMUST00000235619.2	1524	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	48.2841524208513	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTCTCTTGTGTCTG	NA	False	NA	-2	True	ATTAAA	-18	NA	35631947	35399448	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481809_35571319_35571434_35631843
ENSMUST00000235620.2	chr19	+	2441	13	FSM	ENSMUSG00000015176.12	ENSMUST00000235620.2	2441	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	313.587042674491	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTGATTTTCAG	4	False	NA	14	True	ATTAAA	-14	NA	46064427	46072900	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUST00000235637.2	chr19	-	405	2	FSM	ENSMUSG00000118263.2	ENSMUST00000235637.2	405	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTTCTTTACTCTTTA	9200	False	NA	-3	True	NA	NA	NA	5357444	5355905	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5356162_5357295
ENSMUST00000235645.2	chr17	+	1531	5	FSM	ENSMUSG00000041199.4	ENSMUST00000235645.2	1531	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	24.712092181764	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCTTGAGAGTGACCAT	NA	False	NA	14	True	AATAAA	-11	NA	25946705	25950428	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25946822_25947496_25947621_25947799_25947903_25948041_25948144_25949342
ENSMUST00000235680.2	chr19	-	1151	5	FSM	ENSMUSG00000041845.12	ENSMUST00000235680.2	1151	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.56637297521078	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTCCTGACTCTTC	9180	False	NA	-4	True	ACTAAA	-15	NA	4489428	4475694	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4476285_4476607_4476790_4482082_4482193_4482795_4482884_4489247
ENSMUST00000235701.2	chr19	-	1905	12	FSM	ENSMUSG00000024926.11	ENSMUST00000235701.2	1905	12	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_9	58.4797768251612	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTATCAGGAGTTCTTA	3629	False	NA	-6	True	AATAAA	-15	NA	5660076	5653044	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879
ENSMUST00000235756.2	chr19	-	499	3	FSM	ENSMUSG00000118346.2	ENSMUST00000235756.2	499	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	119.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATGGATTTCTTGATG	5096	False	NA	-5	True	AATATA	-16	NA	8751809	8749889	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8750199_8750391_8750471_8751698
ENSMUST00000235776.2	chr19	+	2224	1	FSM	ENSMUSG00000047379.8	ENSMUST00000235776.2	2224	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGGCTCTGTTACTCT	283	False	NA	8	True	AATAAA	-15	NA	5088934	5091158	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5088900_5091200
ENSMUST00000235781.2	chr19	-	2556	17	FSM	ENSMUSG00000063904.5	ENSMUST00000235781.2	2556	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	200.051829221829	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCAGTGTATGTTTCT	NA	False	NA	-7	True	AATAAA	-15	NA	4977091	4957258	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965100_4966357_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812
ENSMUST00000235799.2	chr18	+	1300	7	FSM	ENSMUSG00000024537.6	ENSMUST00000235799.2	1300	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	156.039168871864	2081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGGTTTTATCTGGAAAG	NA	False	NA	26	True	AATAAA	-32	NA	67774670	67787232	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_67775049_67777378_67777551_67779062_67779122_67781197_67781317_67781842_67782017_67786222_67786344_67786955
ENSMUST00000235806.2	chr17	-	738	5	FSM	ENSMUSG00000025732.7	ENSMUST00000235806.2	738	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	120.520485810504	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	7792	False	NA	-4	True	AATAAA	-15	NA	26087708	26082671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26082940_26083224_26083327_26083567_26083696_26087387_26087518_26087598
ENSMUST00000235830.2	chr19	-	1992	6	FSM	ENSMUSG00000025024.8	ENSMUST00000235830.2	1992	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	113.82794033101	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTTAACAAAGGGGCGG	NA	False	NA	-2	True	AATAAA	-23	NA	53377853	53367820	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_53369033_53369671_53369826_53371987_53372167_53372884_53373028_53374803_53374988_53377733
ENSMUST00000235837.2	chr19	+	1875	4	FSM	ENSMUSG00000035372.3	ENSMUST00000235837.2	1875	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	139.776806214606	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	10	True	ATTAAA	-22	NA	3758410	3767880	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_3758509_3764403_3764626_3765637_3765803_3766490
ENSMUST00000235847.2	chr19	-	977	7	FSM	ENSMUSG00000059734.8	ENSMUST00000235847.2	977	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	709.089557108268	5293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTACCTGTTGTGTTGT	NA	False	NA	-8	True	CATAAA	-15	NA	3962734	3958869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962469
ENSMUST00000235853.2	chr19	-	2025	5	FSM	ENSMUSG00000024668.9	ENSMUST00000235853.2	2025	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	101.25802437338	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTATTGTTTGATCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	10502520	10479004	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10498312_10498423_10502422
ENSMUST00000235859.2	chr19	-	2179	18	FSM	ENSMUSG00000041360.9	ENSMUST00000235859.2	2179	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	491.227662003022	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCTCTGTGGTTGAATG	NA	False	NA	67	True	NA	NA	NA	27407220	27367376	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376501_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397518_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ENSMUST00000235900.2	chr19	+	1884	9	FSM	ENSMUSG00000024785.8	ENSMUST00000235900.2	1884	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	128.02514401476	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATCTGGGATTTTATCT	NA	False	NA	113	True	NA	NA	NA	29078774	29121329	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120546
ENSMUST00000235921.2	chr19	+	2602	5	FSM	ENSMUSG00000048832.10	ENSMUST00000235921.2	2602	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	45.6097577279248	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTGTCCATGATGAGT	NA	False	NA	17	True	AATAAA	-20	NA	10666128	10691991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10666344_10683573_10683673_10687633_10687806_10688634_10688718_10689958
ENSMUST00000235956.2	chr18	+	1355	1	FSM	ENSMUSG00000117869.2	ENSMUST00000235956.2	1355	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	937	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTCAAGATTT	NA	False	NA	NA	False	AATAAA	-5	NA	35686462	35687817	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35686500_35687800
ENSMUST00000235960.2	chr18	+	2638	13	FSM	ENSMUSG00000037236.17	ENSMUST00000235960.2	2638	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	348.249990029513	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGGTCATGTTGAT	NA	False	NA	32	True	AATAAA	-8	NA	35695263	35724472	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35695346_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUST00000235964.2	chr19	-	833	7	FSM	ENSMUSG00000071662.5	ENSMUST00000235964.2	833	7	0	0	0	0	multi-exon	FALSE	canonical	3	1319	junction_5	75.5005518743627	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTCATGGAAATGTTG	NA	False	NA	-12	True	CATAAA	-12	NA	8775817	8770548	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587
ENSMUST00000235966.2	chr18	+	755	6	FSM	ENSMUSG00000024608.12	ENSMUST00000235966.2	755	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10470.3724556484	188053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGTTCTGGTGTTGTG	NA	False	NA	67	True	AATAAA	-17	NA	60880220	60911617	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_60880294_60907581_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUST00000235973.2	chr18	+	2651	2	FSM	ENSMUSG00000057561.11	ENSMUST00000235973.2	2651	2	0	0	0	0	multi-exon	FALSE	canonical	3	1710	junction_1	0	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCTTTTTAATATGTT	NA	False	NA	17	True	AATAAA	-18	NA	46730791	46742245	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_46731768_46740570
ENSMUST00000235977.2	chr19	-	1050	9	FSM	ENSMUSG00000036748.17	ENSMUST00000235977.2	1050	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	355.205486303351	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5844	False	NA	-2	True	AGTAAA	-19	NA	46327077	46318978	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320080_46320195_46320258_46320351_46320496_46321056_46321141_46327007
ENSMUST00000235990.2	chr19	-	1260	5	FSM	ENSMUSG00000024666.7	ENSMUST00000235990.2	1260	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	58.8175143983491	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGGTGTCTTCATG	1765	False	NA	-6	True	AATAAA	-13	NA	10554471	10547843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10548633_10548892_10548969_10552200_10552300_10552603_10552876_10554447
ENSMUST00000235992.2	chr18	+	443	1	FSM	ENSMUSG00000118264.2	ENSMUST00000235992.2	443	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3322	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGGCCATTAAAGACTGG	NA	False	NA	NA	False	NA	NA	NA	64421428	64421871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_64421400_64421900
ENSMUST00000236007.2	chr18	-	538	4	FSM	ENSMUSG00000024357.11	ENSMUST00000236007.2	538	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	61.0482504981829	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGGAAGTAATTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	35631915	35563096	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_35563361_35565516_35565605_35571319_35571434_35631843
ENSMUST00000236020.2	chr18	+	857	5	FSM	ENSMUSG00000037058.17	ENSMUST00000236020.2	857	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	1458.22751997073	1835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAATTAAATCACCTCC	4664	False	NA	-19	True	NA	NA	NA	35731693	35749572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35731813_35733097_35733171_35743923_35744088_35746375_35746556_35749251
ENSMUST00000236021.2	chr19	+	370	2	FSM	ENSMUSG00000038274.14	ENSMUST00000236021.2	370	2	0	0	0	0	multi-exon	FALSE	canonical	3	11442	junction_1	0	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGAGGTGAGTGCTTTT	1092	False	NA	NA	False	NA	NA	NA	6107983	6108594	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6108032_6108272
ENSMUST00000236023.2	chr19	+	2814	8	FSM	ENSMUSG00000024835.16	ENSMUST00000236023.2	2814	8	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	88.4835970040522	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTTGACCTACTGTTGT	3613	False	NA	16	True	AATAAA	-17	NA	4198655	4204032	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520
ENSMUST00000236040.2	chr17	+	1134	4	FSM	ENSMUSG00000024181.10	ENSMUST00000236040.2	1134	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	672.139039848817	3822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342493	26345587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26342824_26343529_26343683_26344230_26344539_26345244
ENSMUST00000236044.2	chr19	+	2442	10	FSM	ENSMUSG00000024989.16	ENSMUST00000236044.2	2442	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	104.602716958317	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043484	38062871	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_38043530_38045857_38045929_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ENSMUST00000236046.2	chr19	-	1167	10	FSM	ENSMUSG00000036748.17	ENSMUST00000236046.2	1167	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	358.309542707226	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATATGCTCATTCTGCTC	5874	False	NA	-6	True	AGTAAA	-15	NA	46327047	46318982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326870_46327007
ENSMUST00000236054.2	chr18	-	792	1	FSM	ENSMUSG00000117662.2	ENSMUST00000236054.2	792	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGGTAACTGAGTTT	NA	False	NA	NA	False	TTTAAA	-17	NA	42408243	42407451	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_42407500_42408200
ENSMUST00000236061.2	chr19	-	1164	10	FSM	ENSMUSG00000036748.17	ENSMUST00000236061.2	1164	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_9	336.647010794011	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATATGCTCATTCTGCTC	5858	False	NA	-6	True	AGTAAA	-15	NA	46327063	46318982	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326851_46327007
ENSMUST00000236063.2	chr19	+	1659	10	FSM	ENSMUSG00000003559.9	ENSMUST00000236063.2	1659	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	56.2713882519569	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAACAAATAAAAA	6191	False	NA	-27	True	NA	NA	NA	46696113	46729477	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_46696239_46696508_46696637_46697406_46697558_46697985_46698101_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
ENSMUST00000236078.2	chr18	+	1837	7	FSM	ENSMUSG00000024442.7	ENSMUST00000236078.2	1837	7	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_6	32.9515637801236	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTGAAGATATTGAATA	3983	False	NA	NA	False	NA	NA	NA	38383327	38388605	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522
ENSMUST00000236099.2	chr19	-	1529	5	FSM	ENSMUSG00000024666.7	ENSMUST00000236099.2	1529	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	65.3543227338483	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1785	False	NA	-4	True	AATAAA	-15	NA	10554451	10547841	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554233
ENSMUST00000236112.2	chr17	-	1176	3	FSM	ENSMUSG00000024177.10	ENSMUST00000236112.2	1176	3	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	7.5	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAATGGTCTACTTACTA	NA	False	NA	-6	True	ATTAAA	-16	NA	26314447	26310713	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26311127_26312590_26313245_26314338
ENSMUST00000236137.2	chr17	-	2054	17	FSM	ENSMUSG00000063011.8	ENSMUST00000236137.2	2054	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	16.7330838087305	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTCCTGTAGTGTTC	6592	False	NA	-5	True	AATAAA	-19	NA	25973351	25967589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972049_25972351_25972399_25972747_25972792_25973105_25973197_25973316
ENSMUST00000236152.2	chr19	+	2619	12	FSM	ENSMUSG00000024891.7	ENSMUST00000236152.2	2619	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	10.4311992290135	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGAGTGTTCACTTCT	4058	False	NA	21	True	ATTAAA	-22	NA	5073887	5082000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
ENSMUST00000236166.2	chr17	+	1047	5	FSM	ENSMUSG00000024181.10	ENSMUST00000236166.2	1047	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	700.577752644201	2722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342473	26345587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345265
ENSMUST00000236170.2	chr19	-	352	3	FSM	ENSMUSG00000071528.5	ENSMUST00000236170.2	352	3	0	0	0	0	multi-exon	FALSE	canonical	3	3669	junction_2	1312	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTCATTGTATACACGA	NA	False	NA	NA	False	AATAAA	-16	NA	47079086	47074305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_47074487_47074572_47074669_47079011
ENSMUST00000236178.2	chr19	-	870	8	FSM	ENSMUSG00000034108.7	ENSMUST00000236178.2	870	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	202.991002112841	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889301	4875393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883476_4884267_4884339_4888858_4888932_4889224
ENSMUST00000236181.2	chr19	+	1318	7	FSM	ENSMUSG00000040385.8	ENSMUST00000236181.2	1318	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1475.23350317463	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATAGCCTCTGTCTCTCT	3645	False	NA	30	True	AATAAA	-19	NA	4242431	4245418	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4242485_4242743_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
ENSMUST00000236185.2	chr19	-	1593	4	FSM	ENSMUSG00000024666.7	ENSMUST00000236185.2	1593	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	28.0158685192676	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGGTGTCTTCATG	1765	False	NA	-6	True	AATAAA	-13	NA	10554471	10547843	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10548969_10552200_10552373_10552603_10552876_10554447
ENSMUST00000236206.2	chr19	+	3315	11	FSM	ENSMUSG00000034820.5	ENSMUST00000236206.2	3315	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	86.2092802429066	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAATGTAAAGTGAC	NA	False	NA	NA	False	TTTAAA	-5	NA	10502629	10524766	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10509561_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ENSMUST00000236211.2	chr19	-	423	2	FSM	ENSMUSG00000060803.7	ENSMUST00000236211.2	423	2	0	0	0	0	multi-exon	FALSE	canonical	3	4470	junction_1	0	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTTTGGTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	4085993	4085408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4085662_4085823
ENSMUST00000236217.2	chr19	+	503	5	FSM	ENSMUSG00000038274.14	ENSMUST00000236217.2	503	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	6188.20864628852	84943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	1107	False	NA	4	True	AATAAA	-16	NA	6107998	6109549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6108032_6108257_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUST00000236220.2	chr18	+	1571	9	FSM	ENSMUSG00000035765.11	ENSMUST00000236220.2	1571	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	64.1424196612507	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTTTGTGTTATCTGT	NA	False	NA	NA	False	NA	NA	NA	75151851	75239490	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75238937
ENSMUST00000236232.2	chr17	+	1082	6	FSM	ENSMUSG00000060586.12	ENSMUST00000236232.2	1082	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	73.665731517443	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTTCATAGAGTTTCA	NA	False	NA	12	True	AATAAA	-16	NA	34524899	34535173	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_34525022_34528617_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
ENSMUST00000236255.2	chr19	-	1005	7	FSM	ENSMUSG00000025035.10	ENSMUST00000236255.2	1005	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	150.40020685565	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTGAAATAGTATTAAAT	NA	False	NA	-32	True	AATAAA	-24	NA	46561637	46519545	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_46519826_46529881_46529950_46530790_46530977_46531920_46531972_46540011_46540129_46546676_46546821_46561478
ENSMUST00000236263.2	chr18	-	414	2	FSM	ENSMUSG00000117662.2	ENSMUST00000236263.2	414	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAACTGAGTTTTTATT	NA	False	NA	NA	False	TTTAAA	-22	NA	42408262	42407446	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_42407614_42408015
ENSMUST00000236268.2	chr17	-	2038	8	FSM	ENSMUSG00000036775.14	ENSMUST00000236268.2	2038	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.1607114964073	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGATTCTACCATGGA	NA	False	NA	-23	True	NA	NA	NA	26309249	26300203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26301236_26301849_26302068_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
ENSMUST00000236286.2	chr19	-	1046	2	FSM	ENSMUSG00000040414.9	ENSMUST00000236286.2	1046	2	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTGGGTTTGTCTT	NA	False	NA	-3	True	ATTAAA	-19	NA	43654413	43652239	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_43653083_43654210
ENSMUST00000236326.2	chr17	-	937	6	FSM	ENSMUSG00000024194.17	ENSMUST00000236326.2	937	6	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_5	250.477144665936	2023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGCCTTTTCTCTGTGA	9276	False	NA	-21	True	AATAAA	-14	NA	27158519	27156949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158343_27158424
ENSMUST00000236330.2	chr18	-	760	4	FSM	ENSMUSG00000006050.13	ENSMUST00000236330.2	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	696.127542592272	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCATTCTGATGTCAGA	NA	False	NA	-12	True	NA	NA	NA	36803343	36800301	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803300
ENSMUST00000236336.2	chr19	+	392	5	FSM	ENSMUSG00000038274.14	ENSMUST00000236336.2	392	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5802.4913345476	1483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCAGACTTCTTATGTT	1089	False	NA	-5	True	AATAAA	-7	NA	6107980	6109540	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6108032_6108272_6108356_6108562_6108603_6109173_6109230_6109378
ENSMUST00000236361.2	chr17	-	1320	7	FSM	ENSMUSG00000039615.10	ENSMUST00000236361.2	1320	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	576.693568736658	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCATGTGCTGGTGCA	6759	False	NA	-19	True	AATAAA	-15	NA	26051921	26049609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051281_26051665
ENSMUST00000236370.2	chr19	-	662	4	FSM	ENSMUSG00000084957.4	ENSMUST00000236370.2	662	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	45.8427263102398	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTGTTATGAATGTAAGA	NA	False	NA	NA	False	TATAAA	-31	NA	53932659	53919534	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932586
ENSMUST00000236397.2	chr19	+	1709	10	FSM	ENSMUSG00000024835.16	ENSMUST00000236397.2	1709	10	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_3	211.510441034637	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACCTACTGTTGTGG	3610	False	NA	18	True	AATAAA	-19	NA	4198652	4204034	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4198722_4199340_4199544_4199861_4199985_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
ENSMUST00000236415.2	chr18	-	1956	10	FSM	ENSMUSG00000024644.18	ENSMUST00000236415.2	1956	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	195.289591866433	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAACTGCCGTGGTCTGA	NA	False	NA	-4	True	AATAAA	-19	NA	84698865	84685595	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84698693
ENSMUST00000236421.2	chr18	+	524	3	FSM	ENSMUSG00000036299.6	ENSMUST00000236421.2	524	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	354	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAGGTCCGTGTGAGCA	NA	False	NA	NA	False	ATTAAA	-43	NA	75138939	75142664	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_75138972_75141721_75141898_75142348
ENSMUST00000236443.2	chr19	-	600	2	FSM	ENSMUSG00000024957.10	ENSMUST00000236443.2	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTGTGTTAAGTTAGTT	NA	False	NA	NA	False	TTTAAA	-4	NA	6910195	6906084	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6906560_6910070
ENSMUST00000236451.2	chr19	-	984	8	FSM	ENSMUSG00000034108.7	ENSMUST00000236451.2	984	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	206.828727330078	1812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889298	4875393	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884221_4884339_4888858_4888932_4889224
ENSMUST00000236465.2	chr19	+	1620	8	FSM	ENSMUSG00000003559.9	ENSMUST00000236465.2	1620	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	62.3112660563964	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATACCACAATGGATGTC	6434	False	NA	22	True	AATAAA	-32	NA	46696356	46729526	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_46696637_46697406_46697558_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
ENSMUST00000236503.2	chr17	-	1987	15	FSM	ENSMUSG00000002625.11	ENSMUST00000236503.2	1987	15	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_11	68.7455007804221	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569569	32540398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
ENSMUST00000236510.2	chr19	+	1284	8	FSM	ENSMUSG00000024866.11	ENSMUST00000236510.2	1284	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	10.3332236114429	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGACAGTTCTTGTTCTT	NA	False	NA	3	True	TATAAA	-17	NA	4036569	4040005	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4036612_4036822_4036952_4037050_4037306_4037730_4037924_4038137_4038232_4038397_4038506_4038605_4038716_4039652
ENSMUST00000236539.2	chr18	-	484	5	FSM	ENSMUSG00000024352.13	ENSMUST00000236539.2	484	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	71.3810198862415	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGCTGTAATGCCCAACC	NA	False	NA	-11	True	AATAAA	-22	NA	35793880	35789745	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_35789898_35790001_35790105_35793335_35793398_35793496_35793628_35793844
ENSMUST00000236547.2	chr17	-	926	6	FSM	ENSMUSG00000024177.10	ENSMUST00000236547.2	926	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	147.011019995101	2100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTCTACTTACTAGTTC	NA	False	NA	-2	True	ATTAAA	-20	NA	26314447	26310709	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26311127_26311480_26311532_26312590_26312704_26312832_26312935_26313110_26313245_26314338
ENSMUST00000236561.2	chr19	-	876	6	FSM	ENSMUSG00000024667.13	ENSMUST00000236561.2	876	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	26.7686383665662	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACAGGGCTGGTTGATT	NA	False	NA	-10	True	AATAAA	-10	NA	10533120	10527831	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10528184_10528321_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533076
ENSMUST00000236564.2	chr19	+	1858	5	FSM	ENSMUSG00000071645.7	ENSMUST00000236564.2	1858	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	17.1955662890176	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGTCCGCATCTCA	1440	False	NA	NA	False	AATAAA	-24	NA	8931293	8940865	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707
ENSMUST00000236565.2	chr17	-	1408	6	FSM	ENSMUSG00000039615.10	ENSMUST00000236565.2	1408	6	0	0	0	0	multi-exon	FALSE	canonical	3	1486	junction_1	49.0167318372002	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCATGTGCTGGTGCA	6787	False	NA	-19	True	AATAAA	-15	NA	26051893	26049609	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26049985_26050075_26050193_26050282_26050606_26050769_26050936_26051019_26051219_26051665
ENSMUST00000236566.2	chr19	-	414	3	FSM	ENSMUSG00000071662.5	ENSMUST00000236566.2	414	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	678.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTCTCTGACTCGTTTG	NA	False	NA	NA	False	NA	NA	NA	8775889	8775266	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8775504_8775587_8775698_8775822
ENSMUST00000236607.2	chr19	-	2516	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236607.2	2516	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	13.858404068355	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTTTGTCCCTGTTTAC	9519	False	NA	-24	True	AATAAA	-16	NA	10583018	10569561	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582772
ENSMUST00000236649.2	chr18	+	2822	8	FSM	ENSMUSG00000060450.15	ENSMUST00000236649.2	2822	8	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	44.1310663864829	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	985	False	NA	16	True	AATAAA	-21	NA	38429746	38450895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUST00000236650.2	chr19	-	571	3	FSM	ENSMUSG00000118249.2	ENSMUST00000236650.2	571	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGACTTTGGTGGTATC	NA	False	NA	NA	False	NA	NA	NA	3758176	3739685	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_3740001_3756645_3756786_3758060
ENSMUST00000236666.2	chr18	+	713	5	FSM	ENSMUSG00000037058.17	ENSMUST00000236666.2	713	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1472.19071454754	2248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTACACTTACGCATTG	4647	False	NA	-60	True	NA	NA	NA	35731676	35749403	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35731813_35742645_35742727_35743923_35744088_35746375_35746556_35749251
ENSMUST00000236683.2	chr17	-	627	5	FSM	ENSMUSG00000057411.10	ENSMUST00000236683.2	627	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	82.996987897152	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTGTTTGTTCC	8378	False	NA	-7	True	AATAAA	-17	NA	26011361	26009479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011304
ENSMUST00000236685.2	chr19	+	2195	5	FSM	ENSMUSG00000025209.6	ENSMUST00000236685.2	2195	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	67.8122407829147	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	1658	False	NA	26	True	AATGAA	-19	NA	44994101	45001201	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_44994627_44997718_44997960_44998570_44998679_44998856_44998999_45000022
ENSMUST00000236769.2	chr19	-	3324	7	FSM	ENSMUSG00000024764.11	ENSMUST00000236769.2	3324	7	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_3	27.2605738914075	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTTGTATGTCATTA	NA	False	NA	-2	True	NA	NA	NA	7218421	7203077	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
ENSMUST00000236801.2	chr19	-	1005	7	FSM	ENSMUSG00000059734.8	ENSMUST00000236801.2	1005	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	705.446824517782	7027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTGTTGTTCCATTT	NA	False	NA	-1	True	CATAAA	-22	NA	3962488	3958862	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962202
ENSMUST00000236866.2	chr18	-	4676	13	FSM	ENSMUSG00000041891.17	ENSMUST00000236866.2	4676	13	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_5	66.5663307452716	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTTTTTTCCTCCAT	NA	False	NA	-22	True	AATAAA	-15	NA	66135710	66113827	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ENSMUST00000236885.2	chr19	-	838	5	FSM	ENSMUSG00000084957.4	ENSMUST00000236885.2	838	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	83.9315197050548	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGCTGACTGCTACGGA	NA	False	NA	NA	False	AATACA	-21	NA	53932611	53919390	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_53919934_53920560_53920637_53921921_53922002_53931896_53932011_53932586
ENSMUST00000236888.2	chr17	-	719	6	FSM	ENSMUSG00000024194.17	ENSMUST00000236888.2	719	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	368.320838400436	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	9387	False	NA	-18	True	AATAAA	-17	NA	27158408	27156946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27157151_27157391_27157442_27157545_27157624_27157700_27157761_27157857_27158067_27158290
ENSMUST00000236902.2	chr19	+	950	5	FSM	ENSMUSG00000025068.9	ENSMUST00000236902.2	950	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	136.789985013524	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTCCAAACCACCTCAG	9256	False	NA	21	True	ATTAAA	-30	NA	47844196	47853229	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_47844227_47846297_47846521_47847870_47847970_47851817_47851922_47852735
ENSMUST00000236917.2	chr19	+	813	5	FSM	ENSMUSG00000024902.6	ENSMUST00000236917.2	813	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	253.71871728353	3319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTCTCAGCTTCTCTCC	3744	False	NA	10	True	AATAAA	-13	NA	5012375	5014972	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013718_5014701
ENSMUST00000236925.2	chr18	+	1191	11	FSM	ENSMUSG00000024581.14	ENSMUST00000236925.2	1191	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	72.5303384798389	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCATAAGTAAAGCAGGAAA	NA	False	NA	NA	False	GATAAA	-5	NA	63110979	63130291	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_63111096_63115689_63115775_63116444_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ENSMUST00000236950.2	chr19	-	2437	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236950.2	2437	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_17	12.9229818620786	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGTCCCTGTTTACA	9789	False	NA	-23	True	AATAAA	-17	NA	10582748	10569560	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582582
ENSMUST00000236954.2	chr17	-	2021	12	FSM	ENSMUSG00000024045.7	ENSMUST00000236954.2	2021	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	162.409186321627	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTCCTAAAACGGACAG	NA	False	NA	-29	True	AATAAA	-22	NA	32540087	32523970	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32537744_32537784_32540058
ENSMUST00000236960.2	chr19	-	2148	9	FSM	ENSMUSG00000025220.9	ENSMUST00000236960.2	2148	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	256.490953787848	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTGGTTGCATTTC	NA	False	NA	0	True	AATAAA	-23	NA	45760325	45740268	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45753888_45754064_45755832_45756447_45758489_45758649_45760120
ENSMUST00000236962.2	chr19	-	1478	6	FSM	ENSMUSG00000025024.8	ENSMUST00000236962.2	1478	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	83.1903840596977	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGGATGTGCGCCCCT	NA	False	NA	-8	True	ATTAAA	-16	NA	53379005	53368309	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_53369033_53369671_53369826_53371987_53372167_53372884_53373028_53377733_53377854_53378846
ENSMUST00000236970.2	chr19	-	2217	10	FSM	ENSMUSG00000024826.16	ENSMUST00000236970.2	2217	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	234.668087116913	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGCTGGACAGTTTGT	7071	False	NA	-26	True	AATAAA	-14	NA	5957100	5947414	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954341_5954481_5954575_5955416_5955581_5956551_5956660_5957028
ENSMUST00000236976.2	chr19	+	744	4	FSM	ENSMUSG00000038274.14	ENSMUST00000236976.2	744	4	0	0	0	0	multi-exon	FALSE	canonical	3	14010	junction_2	399.82023738453	21538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	1092	False	NA	4	True	AATAAA	-16	NA	6107983	6109549	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUST00000236978.2	chr19	-	2731	17	FSM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_12	26.041358331508	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGCCAAGAGTAAATTAAA	9889	False	NA	65	True	NA	NA	NA	5821447	5808378	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ENSMUST00000236980.2	chr19	-	999	9	FSM	ENSMUSG00000036748.17	ENSMUST00000236980.2	999	9	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_8	339.490035752156	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	-2	True	NA	-8	True	AGTAAA	-13	NA	46327056	46318984	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321138_46327007
ENSMUST00000237003.2	chr17	+	2940	13	FSM	ENSMUSG00000091586.3	ENSMUST00000237003.2	2940	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.2925122684606	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGAAGAAAAAATGAGA	NA	False	NA	NA	False	NA	NA	NA	32725023	32749117	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_32725139_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747333_32747690
ENSMUST00000237004.2	chr18	-	4343	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	0	0	0	0	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	5613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTTGTTTGTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	63825508	63794164	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
ENSMUST00000237021.2	chr18	+	708	3	FSM	ENSMUSG00000117869.2	ENSMUST00000237021.2	708	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	17	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGTTAAAAGAAAATGGGA	NA	False	NA	NA	False	NA	NA	NA	35686464	35690283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_35686523_35687479_35687515_35689668
ENSMUST00000237025.2	chr19	+	941	7	FSM	ENSMUSG00000024875.6	ENSMUST00000237025.2	941	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	203.430099925148	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGACCCTGGTTCC	NA	False	NA	26	True	NA	NA	NA	5138587	5142533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5142156_5142251_5142329
ENSMUST00000237039.2	chr19	+	2166	6	FSM	ENSMUSG00000025203.7	ENSMUST00000237039.2	2166	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1062.75159844622	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATAAGGATTTTCTTTTC	1469	False	NA	NA	False	AGTAAA	-31	NA	44282514	44292417	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288263_44289660_44289884_44291439
ENSMUST00000237080.2	chr17	-	945	6	FSM	ENSMUSG00000025732.7	ENSMUST00000237080.2	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	129.343882731268	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	7792	False	NA	-4	True	AATAAA	-15	NA	26087708	26082671	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26083014_26083224_26083327_26083567_26083696_26084508_26084642_26087387_26087518_26087598
ENSMUST00000237103.2	chr17	-	4071	13	FSM	ENSMUSG00000024045.7	ENSMUST00000237103.2	4071	13	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_6	76.8282265114124	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540099	32522647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ENSMUST00000237117.2	chr19	+	826	8	FSM	ENSMUSG00000080268.5	ENSMUST00000237117.2	826	8	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_2	18.2600265998867	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCCATCCCTGACCAG	7497	False	NA	NA	False	NA	NA	NA	5096148	5099651	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
ENSMUST00000237125.2	chr19	+	854	6	FSM	ENSMUSG00000024835.16	ENSMUST00000237125.2	854	6	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	103.619303220973	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAGTGATGTAGCAAGC	3588	False	NA	NA	False	NA	NA	NA	4198630	4200823	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705
ENSMUST00000237161.2	chr18	+	2534	2	FSM	ENSMUSG00000024521.9	ENSMUST00000237161.2	2534	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTGTGTTTTATGTA	NA	False	NA	27	True	AATAAA	-39	NA	66591645	66598636	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_66591884_66596340
ENSMUST00000237167.2	chr19	-	732	3	FSM	ENSMUSG00000024844.16	ENSMUST00000237167.2	732	3	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_2	2653	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATCTGTTGGATGCCCTT	8743	False	NA	-107	True	NA	NA	NA	5416634	5414766	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_5415187_5415845_5415985_5416461
ENSMUST00000237183.2	chr17	+	1743	6	FSM	ENSMUSG00000041199.4	ENSMUST00000237183.2	1743	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	28.5096474899287	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGACCATGAGCATATCT	NA	False	NA	24	True	AATAAA	-21	NA	25946643	25950438	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25946822_25947225_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
ENSMUST00000237186.2	chr17	-	1341	7	FSM	ENSMUSG00000039615.10	ENSMUST00000237186.2	1341	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	575.587139845528	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTTGCCAGTTGCCTG	6302	False	NA	1	True	AATAAA	-35	NA	26052378	26049589	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26052059
ENSMUST00000237219.2	chr19	+	1719	9	FSM	ENSMUSG00000003559.9	ENSMUST00000237219.2	1719	9	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_4	13.865424623862	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTCTGTAGTTTGTCT	6484	False	NA	34	True	AATAAA	-44	NA	46696406	46729538	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
ENSMUST00000237234.2	chr19	+	972	6	FSM	ENSMUSG00000047656.10	ENSMUST00000237234.2	972	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	13.8650640099496	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTTGTGGTTCCTCATC	NA	False	NA	36	True	ATTAAA	-42	NA	6973498	6976412	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6973893_6974063_6974146_6975559_6975735_6975876_6975934_6976025_6976137_6976259
ENSMUST00000237240.2	chr19	+	2355	4	FSM	ENSMUSG00000048832.10	ENSMUST00000237240.2	2355	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	56.9814784722974	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTCTGTGGTGTCCATG	NA	False	NA	11	True	AATAAA	-14	NA	10666098	10691985	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_10666174_10683573_10683673_10688634_10688718_10689887
ENSMUST00000237244.2	chr19	+	1107	1	FSM	ENSMUSG00000024959.15	ENSMUST00000237244.2	1107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGGAAGTCTTTCGAGGC	730	False	NA	NA	False	NA	NA	NA	6927842	6928949	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6927800_6928900
ENSMUST00000237265.2	chr17	-	1993	9	FSM	ENSMUSG00000036775.14	ENSMUST00000237265.2	1993	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	55.4211151096764	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGATTCTACCATGGA	NA	False	NA	-23	True	NA	NA	NA	26309194	26300203	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26301236_26301944_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
ENSMUST00000237323.2	chr17	-	975	9	FSM	ENSMUSG00000061613.14	ENSMUST00000237323.2	975	9	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_6	2395.95355495469	6849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877729	31866055	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31871475_31871543_31873952_31874041_31877626
ENSMUST00000237341.2	chr19	-	780	7	FSM	ENSMUSG00000059734.8	ENSMUST00000237341.2	780	7	0	0	0	0	multi-exon	FALSE	canonical	3	1174	junction_6	307.096076171611	7186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTGTTGTGTTGTTCC	NA	False	NA	-5	True	CATAAA	-18	NA	3962774	3958866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962709
ENSMUST00000237347.2	chr19	+	1940	9	FSM	ENSMUSG00000037847.15	ENSMUST00000237347.2	1940	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	10.6880482315528	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCTCAATTCATACAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	18609313	18629792	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18628599
ENSMUST00000237359.2	chr17	-	2044	17	FSM	ENSMUSG00000063011.8	ENSMUST00000237359.2	2044	17	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_13	11.5648646230728	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGTCCTGTAGTGTTCC	6591	False	NA	-4	True	AATAAA	-20	NA	25973352	25967588	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105_25973197_25973316
ENSMUST00000237369.2	chr18	-	2103	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237369.2	2103	15	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_12	1341.18505510642	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTCTGACATCCAGTA	NA	False	NA	-10	True	AATAAA	-26	NA	64649626	64633283	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644970_64645054_64645121_64648396_64648480_64649486
ENSMUST00000237380.2	chr19	-	806	5	FSM	ENSMUSG00000050623.6	ENSMUST00000237380.2	806	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	16.5529453572468	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTGCGTGGCTGCTTGC	7411	False	NA	1	True	ATTAAA	-22	NA	6902727	6899790	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6900029_6900668_6900736_6900890_6900968_6902161_6902518_6902659
ENSMUST00000237400.2	chr18	-	2745	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	0	0	0	0	multi-exon	FALSE	canonical	3	3478	junction_14	514.735973533014	9462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGACTTATTTTCTC	NA	False	NA	NA	False	AATAAA	-31	NA	64649723	64632717	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUST00000237408.2	chr19	+	2683	10	FSM	ENSMUSG00000024989.16	ENSMUST00000237408.2	2683	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	135.940982110929	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTCTAGTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	38043536	38062869	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_38043766_38045857_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061748
ENSMUST00000237411.2	chr17	-	1958	6	FSM	ENSMUSG00000057789.15	ENSMUST00000237411.2	1958	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	53.687987483235	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCGCCTGGCATCTTTA	NA	False	NA	-2	True	AATAAA	-18	NA	27247561	27238785	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27240010_27240140_27240322_27241412_27241557_27241715_27241847_27244766_27244868_27247384
ENSMUST00000237467.2	chr19	-	2101	10	FSM	ENSMUSG00000024824.8	ENSMUST00000237467.2	2101	10	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_3	31.4889751429854	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAGGAAAGACAC	6027	False	NA	-24	True	NA	NA	NA	4251606	4245218	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ENSMUST00000237478.2	chr18	+	2165	3	FSM	ENSMUSG00000057561.11	ENSMUST00000237478.2	2165	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	841.5	1660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGAGAGGCTTTTTTT	NA	False	NA	27	True	AATAAA	-21	NA	46730864	46742316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_46731224_46731707_46731768_46740570
ENSMUST00000237487.2	chr18	-	1929	5	FSM	ENSMUSG00000052102.16	ENSMUST00000237487.2	1929	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	550.877028019866	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCATTCTCCTGAGTT	NA	False	NA	-7	True	AATAAA	-17	NA	38472033	38460587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_38462027_38466206_38466390_38468068_38468171_38471143_38471276_38471960
ENSMUST00000237503.2	chr18	-	1648	2	FSM	ENSMUSG00000024587.11	ENSMUST00000237503.2	1648	2	0	0	0	0	multi-exon	FALSE	canonical	3	4998	junction_1	0	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64635026	64632725	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_64633721_64634373
ENSMUST00000237565.2	chr19	-	429	2	FSM	ENSMUSG00000038155.12	ENSMUST00000237565.2	429	2	0	0	0	0	multi-exon	FALSE	canonical	3	3855	junction_1	0	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTTTGGTGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	4090883	4090286	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4090540_4090707
ENSMUST00000237585.2	chr18	-	2268	14	FSM	ENSMUSG00000024587.11	ENSMUST00000237585.2	2268	14	0	0	0	0	multi-exon	FALSE	canonical	3	3478	junction_13	534.16599817797	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTATGGTCTGACATC	NA	False	NA	-15	True	AATAAA	-21	NA	64649508	64633288	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_64633721_64634373_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUST00000237602.2	chr18	+	4417	22	FSM	ENSMUSG00000024498.17	ENSMUST00000237602.2	4417	22	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_6	86.5887404766016	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTCCCTTTCTTTTGTG	NA	False	NA	NA	False	TATAAA	-25	NA	42644551	42708858	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUST00000237609.2	chr17	-	785	5	FSM	ENSMUSG00000024194.17	ENSMUST00000237609.2	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_4	189.078026221981	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	9398	False	NA	-18	True	AATAAA	-17	NA	27158397	27156946	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857_27158067_27158290
ENSMUST00000237634.2	chr19	-	775	5	FSM	ENSMUSG00000118346.2	ENSMUST00000237634.2	775	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	80.9073544246751	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGGATTTCTTGATGT	5074	False	NA	-4	True	AATATA	-17	NA	8751831	8749888	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8750987_8751698
ENSMUST00000237650.2	chr19	-	488	4	FSM	ENSMUSG00000038155.12	ENSMUST00000237650.2	488	4	0	0	0	0	multi-exon	FALSE	canonical	3	2023	junction_2	767.872819330562	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAACATGTGAACCGTCCC	NA	False	NA	NA	False	NA	NA	NA	4091528	4090394	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397
ENSMUST00000237692.2	chr17	-	1823	9	FSM	ENSMUSG00000024002.19	ENSMUST00000237692.2	1823	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	78.3700157904795	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GACAAAGAAAAATAACAGCA	NA	False	NA	87	True	NA	NA	NA	32503107	32432536	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503036
ENSMUST00000237700.2	chr18	+	1684	8	FSM	ENSMUSG00000079614.5	ENSMUST00000237700.2	1684	8	0	0	0	0	multi-exon	FALSE	canonical	3	1621	junction_6	144.078210053585	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTTGTGAGACCAGTG	NA	False	NA	NA	False	AATAAA	-11	NA	67908044	67925663	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933
ENSMUST00000237703.2	chr17	-	1528	2	FSM	ENSMUSG00000057411.10	ENSMUST00000237703.2	1528	2	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTGTTTGTTCC	8370	False	NA	-7	True	AATAAA	-17	NA	26011369	26009479	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26009958_26010319
ENSMUST00000237715.2	chr19	-	213	1	FSM	ENSMUSG00000117667.2	ENSMUST00000237715.2	213	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	526	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGGTGCCTCTCAGCTC	NA	False	NA	NA	False	NA	NA	NA	33650941	33650728	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_33650700_33650900
ENSMUST00000237720.2	chr19	-	425	5	FSM	ENSMUSG00000071528.5	ENSMUST00000237720.2	425	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2533.27548590752	4458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATTATGAACCTGGAA	NA	False	NA	-22	True	NA	NA	NA	47079073	47071924	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_47072009_47073207_47073298_47074393_47074487_47074572_47074669_47079011
ENSMUST00000237738.2	chr19	-	1357	8	FSM	ENSMUSG00000024792.10	ENSMUST00000237738.2	1357	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	215.875247420772	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGAAGCAGCTTTTTC	6427	False	NA	NA	False	AATAAA	-18	NA	6134986	6130791	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134079_6134381_6134492_6134824
ENSMUST00000237785.2	chr17	+	1761	6	FSM	ENSMUSG00000041199.4	ENSMUST00000237785.2	1761	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	25.198412648419	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAGAGTGACCATGAGC	NA	False	NA	18	True	AATAAA	-15	NA	25946690	25950432	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_25946822_25947154_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
ENSMUST00000237792.2	chr18	-	1024	3	FSM	ENSMUSG00000024346.7	ENSMUST00000237792.2	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	1494	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTTGCCTTGCATTT	NA	False	NA	NA	False	NA	NA	NA	36587577	36536728	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_-_36537514_36584132_36584300_36587505
ENSMUST00000237827.2	chr19	-	1231	5	FSM	ENSMUSG00000024668.9	ENSMUST00000237827.2	1231	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	111.850346445597	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCACAATTATCTTCATT	NA	False	NA	-99	True	AAGAAA	-17	NA	10502546	10479806	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_10480494_10482797_10482890_10494343_10494454_10494532_10494751_10502422
ENSMUST00000237840.2	chr19	+	472	4	FSM	ENSMUSG00000038274.14	ENSMUST00000237840.2	472	4	0	0	0	0	multi-exon	FALSE	canonical	3	14010	junction_2	399.82023738453	21237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTTATGTTTTCTTC	1361	False	NA	1	True	AATAAA	-13	NA	6108252	6109546	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUST00000237859.2	chr19	+	450	5	FSM	ENSMUSG00000038274.14	ENSMUST00000237859.2	450	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	6192.96432958402	3824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGCCATGCTAATAAAGC	1080	False	NA	-29	True	NA	NA	NA	6107971	6109516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_6108032_6108304_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUST00000237862.2	chr19	-	1619	10	FSM	ENSMUSG00000037916.15	ENSMUST00000237862.2	1619	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	453.44895039826	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCTCTTTTTGTGGCAC	6538	False	NA	NA	False	NA	NA	NA	4062694	4057383	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062593
ENSMUST00000237875.2	chr17	-	2064	7	FSM	ENSMUSG00000036775.14	ENSMUST00000237875.2	2064	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	84.6569876357265	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTGCTTGTGTTTCCT	NA	False	NA	-4	True	NA	NA	NA	26309264	26300184	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26303110_26306297_26306434_26307902_26307972_26309070
ENSMUST00000237893.2	chr19	-	806	7	FSM	ENSMUSG00000060803.7	ENSMUST00000237893.2	806	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1359.76024234667	17248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGGTGTCTTTGGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	4087977	4085410	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087865
ENSMUST00000237950.2	chr17	+	1046	5	FSM	ENSMUSG00000024181.10	ENSMUST00000237950.2	1046	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	613.108677152754	4144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342493	26345587	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_26342824_26343529_26343693_26344242_26344366_26344451_26344539_26345244
ENSMUST00000237955.2	chr19	+	2193	4	FSM	ENSMUSG00000035372.3	ENSMUST00000237955.2	2193	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	122.806984962402	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCCAGCTTGTGTGGG	NA	False	NA	3	True	ATTAAA	-15	NA	3758370	3767873	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_3758437_3764046_3764626_3765637_3765803_3766490
ENSMUST00000237982.2	chr19	-	670	7	FSM	ENSMUSG00000060803.7	ENSMUST00000237982.2	670	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	1372.45627333705	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATGTGGCTCGCCTCA	NA	False	NA	NA	False	NA	NA	NA	4087925	4085572	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087472_4087584_4087621_4087862
ENSMUST00000238007.2	chr19	-	1010	9	FSM	ENSMUSG00000054237.7	ENSMUST00000238007.2	1010	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	124.747682844212	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTCTTTAGCATTATGG	NA	False	NA	NA	False	AATAAA	-10	NA	38212604	38192990	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210399_38212409
ENSMUST00000238036.2	chr19	+	1291	9	FSM	ENSMUSG00000071655.13	ENSMUST00000238036.2	1291	9	0	0	0	0	multi-exon	FALSE	canonical	3	1115	junction_4	107.257575490032	9459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGGGGCTGGAGAG	5946	False	NA	3	True	ATTAAA	-16	NA	8848956	8853227	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ENSMUST00000238093.2	chr19	+	1018	7	FSM	ENSMUSG00000024875.6	ENSMUST00000238093.2	1018	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	209.84657093537	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGACCCTGGTTCC	NA	False	NA	26	True	NA	NA	NA	5138572	5142533	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142329
ENSMUST00000238094.2	chr19	-	878	2	FSM	ENSMUSG00000040247.7	ENSMUST00000238094.2	878	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTCCTCCACTCTCCA	NA	False	NA	NA	False	AATAAA	-35	NA	4235531	4234375	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_4235073_4235350
ENSMUST00000238095.2	chr19	-	679	6	FSM	ENSMUSG00000024953.18	ENSMUST00000238095.2	679	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	204.758394211324	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	False	NA	-9	True	AATAAA	-21	NA	6886898	6884073	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_6884320_6884433_6884489_6884609_6884649_6884909_6885042_6885349_6885485_6886826
ENSMUST00000238120.2	chr17	-	2165	16	FSM	ENSMUSG00000063011.8	ENSMUST00000238120.2	2165	16	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_13	10.6111052937739	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6592	False	NA	-2	True	AATAAA	-22	NA	25973351	25967586	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105
ENSMUST00000238168.2	chr18	+	2012	4	FSM	ENSMUSG00000057561.11	ENSMUST00000238168.2	2012	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	796.694141785639	2807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGAGAGGCTTTTTTT	NA	False	NA	27	True	AATAAA	-21	NA	46730767	46742316	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr18_+_46730868_46731117_46731224_46731707_46731768_46740570
ENSMUST00000238192.2	chr17	-	3115	9	FSM	ENSMUSG00000002076.13	ENSMUST00000238192.2	3115	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	409.307036343134	2909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCTTGCAGGGATTGAA	NA	False	NA	NA	False	AATAAA	-17	NA	32255323	32163742	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418_32253677_32255269
ENSMUST00000238220.2	chr12	-	1018	6	FSM	ENSMUSG00000049882.11	ENSMUST00000238220.2	1018	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	78.351515620312	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAACGTTGACAATC	NA	False	NA	-59	True	NA	NA	NA	69629791	69624455	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_69624715_69626607_69626785_69627891_69628012_69629049_69629120_69629304_69629400_69629494
ENSMUST00000238230.2	chr2	+	2159	4	FSM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	5.43650214343336	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACATTTTGGGGAGCATC	NA	False	NA	NA	False	AATAAA	-20	NA	150153350	150168932	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_150153479_150165621_150165749_150165947_150166009_150167089
ENSMUST00000238277.2	chr2	+	572	5	FSM	ENSMUSG00000074578.15	ENSMUST00000238277.2	572	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	409.357041590834	20696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905140	166907782	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907232_166907401_166907606
ENSMUST00000238335.2	chr5	-	1232	2	FSM	ENSMUSG00000028958.16	ENSMUST00000238335.2	1232	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACGTTTTCCTACCCAGT	NA	False	NA	-15	True	ATTAAA	-7	NA	24651950	24650474	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_-_24651288_24651531
ENSMUST00000238384.2	chr12	+	2352	8	FSM	ENSMUSG00000097451.12	ENSMUST00000238384.2	2352	8	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_5	36.3862499259469	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	901	False	NA	NA	False	ACTAAA	-5	NA	109616672	109628150	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ENSMUST00000238418.2	chr8	-	3180	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238418.2	3180	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	9.33742469849155	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTGTCAATGTATTTT	NA	False	NA	0	True	NA	NA	NA	70169552	70157786	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169417
ENSMUST00000238583.2	chr4	-	1296	4	FSM	ENSMUSG00000045699.5	ENSMUST00000238583.2	1296	4	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	62.9938268580519	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	NNNNNNNNNNNNNNNNNNNN	NA	False	NA	NA	False	NA	NA	NA	146993984	146976152	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr4_-_146977116_146978205_146978333_146982168_146982273_146993882
ENSMUST00000238718.2	chrX	-	4524	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	1914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGGTTTTTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	105055505	105011689	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ENSMUST00000238792.2	chr7	-	1503	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	0	0	0	0	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATTTTTTCCTAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	89629910	89604144	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUST00000238817.2	chr19	+	2692	22	FSM	ENSMUSG00000053799.9	ENSMUST00000238817.2	2692	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	21.0093381678108	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGCTTGCATTTTTT	1910	False	NA	NA	False	AATAAA	-38	NA	37538906	37671703	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_37539014_37558830_37559003_37560046_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
ENSMUST00000238930.2	chr9	-	862	4	FSM	ENSMUSG00000040883.19	ENSMUST00000238930.2	862	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	87.3473271231327	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGCCATGGTCATTTTT	NA	False	NA	-7	True	AATAAA	-12	NA	21838831	21832305	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838582
ENSMUST00000238932.2	chr9	-	2220	11	FSM	ENSMUSG00000062762.18	ENSMUST00000238932.2	2220	11	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_2	34.4551882885582	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708689	36690454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
ENSMUST00000238938.2	chr12	-	348	1	FSM	ENSMUSG00000118552.2	ENSMUST00000238938.2	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	695	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGCTCCCCTGCAAAT	NA	False	NA	-80	True	NA	NA	NA	75678092	75677744	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_75677700_75678100
ENSMUST00000238953.2	chr10	-	3204	8	FSM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_3	48.542848734549	3011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTTTTCTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-29	NA	40178182	40163453	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ENSMUST00000238999.2	chr7	-	3180	20	FSM	ENSMUSG00000030533.17	ENSMUST00000238999.2	3180	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	22.3203818512	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATCTGTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	79989919	79975043	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978880_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989816
ENSMUST00000239007.2	chr11	-	561	4	FSM	ENSMUSG00000049154.13	ENSMUST00000239007.2	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	3.29983164553722	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAGACTATGTCACAGA	NA	False	NA	NA	False	AATAAA	-21	NA	58692786	58683628	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_58683826_58687380_58687485_58689461_58689522_58692586
ENSMUST00000239015.2	chr7	-	1855	7	FSM	ENSMUSG00000008140.19	ENSMUST00000239015.2	1855	7	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_1	150.719386056782	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTTCTTGGTTCATTC	NA	False	NA	27	True	NA	NA	NA	44145937	44139361	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ENSMUST00000239016.2	chr11	-	1849	8	FSM	ENSMUSG00000042709.16	ENSMUST00000239016.2	1849	8	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	36.2902134443535	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307925	60291463	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ENSMUST00000239019.2	chrX	+	4179	13	FSM	ENSMUSG00000045103.20	ENSMUST00000239019.2	4179	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	97.2934778560893	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTATTGGTTGGACTGTA	NA	False	NA	19	True	AATAAA	-25	NA	84091924	84248654	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ENSMUST00000239021.2	chr9	-	2104	11	FSM	ENSMUSG00000062762.18	ENSMUST00000239021.2	2104	11	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_10	155.462664328127	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708364	36690454	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708299
ENSMUST00000239050.2	chr5	+	795	6	FSM	ENSMUSG00000089798.11	ENSMUST00000239050.2	795	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	1.2	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGGTTGAATGGTTCC	NA	False	NA	NA	False	ATTAAA	-16	NA	107682576	107696243	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_107682675_107686995_107687090_107691785_107691880_107693553_107693723_107694066_107694146_107695982
ENSMUST00000239073.2	chr11	-	1958	9	FSM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	0	0	0	0	multi-exon	FALSE	canonical	3	1237	junction_4	96.8522553944925	5668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTGTTTGCCTATACC	NA	False	NA	NA	False	ATTAAA	-5	NA	21521934	21506691	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ENSMUST00000239075.2	chr2	+	1163	9	FSM	ENSMUSG00000026921.21	ENSMUST00000239075.2	1163	9	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	46.4239970273995	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTGTCAATGGGGGAA	172	False	NA	12	True	AATAAA	-12	NA	26476641	26482693	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
ENSMUST00000239076.2	chr3	+	1545	10	FSM	ENSMUSG00000118504.2	ENSMUST00000239076.2	1545	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	192.823529633307	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGATTTGGGCTGGCAGG	NA	False	NA	7	True	AATAAA	-16	NA	89960210	89973179	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944_89969240_89970515_89970557_89971731_89971862_89972816
ENSMUST00000239083.2	chr9	+	3558	20	FSM	ENSMUSG00000025240.11	ENSMUST00000026270.9	3558	20	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_14	24.7475900502736	324	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGTTGGTACTGTTTCT	NA	False	NA	19	True	AATAAA	-20	NA	123358823	123421665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ENSMUST00000239099.2	chr14	-	880	5	FSM	ENSMUSG00000021951.8	ENSMUST00000239099.2	880	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_4	52.3115665986023	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTCATGAGGTTGAGA	NA	False	NA	-8	True	AATAAA	-20	NA	57809069	57787053	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378_57803542_57808999
ENSMUST00000239124.2	chr6	-	1008	2	FSM	ENSMUSG00000057103.12	ENSMUST00000239124.2	1008	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCTAATGCATGTGATG	9874	False	NA	NA	False	NA	NA	NA	85892659	85887138	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_85888003_85892515
ENSMUST00000239148.2	chr3	-	5357	15	FSM	ENSMUSG00000039735.17	ENSMUST00000239148.2	5357	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	30.347981810987	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAAGATGTGTACTTATC	NA	False	NA	-5	True	AATAAA	-18	NA	122413364	122332373	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_-_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122350060_122350220_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
ENSMUST00000239180.2	chr11	+	1083	5	FSM	ENSMUSG00000020812.19	ENSMUST00000239180.2	1083	5	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_4	27.427176303805	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTAGCATTGTGGGTA	NA	False	NA	2	True	AATAAA	-15	NA	116562494	116566623	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116565202_116566333
ENSMUST00000239184.2	chr9	-	1104	4	FSM	ENSMUSG00000097195.11	ENSMUST00000239184.2	1104	4	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_2	276.362483384091	3485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359
ENSMUST00000239192.2	chr9	-	1012	5	FSM	ENSMUSG00000097195.11	ENSMUST00000239192.2	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	476.290090176145	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCAATTGCAAATATTTA	NA	False	NA	-23	True	AATAAA	-24	NA	88404986	88403118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403770_88403970_88404029_88404359_88404435_88404536_88404682_88404903
ENSMUST00000239212.2	chr9	-	1372	3	FSM	ENSMUSG00000097195.11	ENSMUST00000239212.2	1372	3	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_1	91.5	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403770_88403970_88404640_88404903
ENSMUST00000239219.2	chr9	-	1636	2	FSM	ENSMUSG00000097195.11	ENSMUST00000239219.2	1636	2	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_1	0	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403502_88403702
ENSMUST00000239226.2	chr11	+	1257	5	FSM	ENSMUSG00000020812.19	ENSMUST00000239226.2	1257	5	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_4	28.7347785792757	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	3	True	AATAAA	-16	NA	116562500	116566624	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116563182_116563489_116563565_116564763_116564898_116565125_116565202_116566333
ENSMUST00000239227.2	chr9	-	1312	4	FSM	ENSMUSG00000097195.11	ENSMUST00000239227.2	1312	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	481.917696984316	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403770_88403970_88404435_88404536_88404682_88404903
ENSMUST00000239240.2	chr19	+	1988	11	FSM	ENSMUSG00000024776.19	ENSMUST00000239240.2	1988	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	14.1918990977247	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCGGTTGTCACATTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	34169628	34217733	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_+_34169996_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ENSMUST00000239246.2	chr13	-	2642	5	FSM	ENSMUSG00000055313.16	ENSMUST00000239246.2	2642	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.20156211871642	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATTTCCTCACTTTCAG	NA	False	NA	NA	False	ATTAAA	-13	NA	21625214	21606021	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr13_-_21607795_21612437_21612549_21617560_21617713_21618520_21618842_21624929
ENSMUST00000239253.2	chr9	-	1781	2	FSM	ENSMUSG00000097195.11	ENSMUST00000239253.2	1781	2	0	0	0	0	multi-exon	FALSE	canonical	3	1190	junction_1	0	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATATTTATTCAATTCT	NA	False	NA	-14	True	AATAAA	-33	NA	88404992	88403109	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88404435_88404536
ENSMUST00000239278.2	chr9	-	1534	3	FSM	ENSMUSG00000097195.11	ENSMUST00000239278.2	1534	3	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_1	178	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403502_88403702_88404435_88404536
ENSMUST00000239281.2	chr11	+	857	6	FSM	ENSMUSG00000020812.19	ENSMUST00000239281.2	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	61.1901952930369	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTAGCATTGTGGGTATA	NA	False	NA	4	True	AATAAA	-17	NA	116562513	116566625	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125_116565202_116566314
ENSMUST00000239284.2	chr9	-	1533	3	FSM	ENSMUSG00000097195.11	ENSMUST00000239284.2	1533	3	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_1	392.5	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404943	88403107	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403770_88403970_88404435_88404536
ENSMUST00000239285.2	chr9	-	869	3	FSM	ENSMUSG00000097195.11	ENSMUST00000239285.2	869	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	417	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403502_88403702_88403770_88404536
ENSMUST00000239288.2	chr2	-	1233	12	FSM	ENSMUSG00000027406.14	ENSMUST00000239288.2	1233	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	222.733469301557	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTATCTGGTTTTGTG	NA	False	NA	NA	False	AATAAA	-11	NA	130126381	130121236	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_130121358_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ENSMUST00000239290.2	chr9	-	1392	3	FSM	ENSMUSG00000097195.11	ENSMUST00000239290.2	1392	3	0	0	0	0	multi-exon	FALSE	canonical	3	1073	junction_1	58.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCAATTGCAAATATTTA	NA	False	NA	-23	True	AATAAA	-24	NA	88404943	88403118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88404029_88404359_88404435_88404536
ENSMUST00000239327.2	chr9	-	705	5	FSM	ENSMUSG00000097195.11	ENSMUST00000239327.2	705	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	336.085089672244	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404536_88404682_88404903
ENSMUST00000239344.2	chr9	-	1437	3	FSM	ENSMUSG00000097195.11	ENSMUST00000239344.2	1437	3	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_2	214.5	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404943	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403502_88403702_88403770_88403970
ENSMUST00000239359.2	chr9	-	1471	3	FSM	ENSMUSG00000097195.11	ENSMUST00000239359.2	1471	3	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_2	301	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404941	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88404435_88404536_88404640_88404903
ENSMUST00000239363.2	chr11	+	1631	4	FSM	ENSMUSG00000020812.19	ENSMUST00000239363.2	1631	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	32.5371582450998	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTTGGTAGCATTGTG	NA	False	NA	-2	True	AATAAA	-11	NA	116562429	116566619	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116563565_116564763_116564898_116565125_116565202_116566333
ENSMUST00000239365.2	chr9	-	809	6	FSM	ENSMUSG00000097195.11	ENSMUST00000239365.2	809	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	430.698688180032	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404970	88403104	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404682_88404903
ENSMUST00000239373.2	chr10	+	5956	3	FSM	ENSMUSG00000038587.11	ENSMUST00000239373.2	5956	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	774.5	1938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTTTTTTTATTAA	NA	False	NA	23	True	AATAAA	-19	NA	4284544	4309470	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_4284710_4303141_4307940_4308477
ENSMUST00000239377.2	chr9	-	913	4	FSM	ENSMUSG00000097195.11	ENSMUST00000239377.2	913	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	338.103534438787	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCAATTGCAAATATTTA	NA	False	NA	-23	True	AATAAA	-24	NA	88404941	88403118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404536
ENSMUST00000239379.2	chr9	-	1623	2	FSM	ENSMUSG00000097195.11	ENSMUST00000239379.2	1623	2	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_1	0	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCAATTGCAAATATTTA	NA	False	NA	-23	True	AATAAA	-24	NA	88404942	88403118	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_-_88403770_88403970
ENSMUST00000239397.2	chr6	-	1287	8	FSM	ENSMUSG00000030246.13	ENSMUST00000239397.2	1287	8	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_1	65.6636450839754	3681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTCTGCCTGCCTTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	142453669	142435977	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
ENSMUST00000239398.2	chr2	-	3565	26	FSM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_25	70.0256410181299	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTGAGTAATAGTTGAAA	NA	False	NA	NA	False	AATATA	-37	NA	53081199	53028486	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
ENSMUST00000239401.2	chr10	+	1101	2	FSM	ENSMUSG00000020308.8	ENSMUST00000239401.2	1101	2	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTTGCTGGTCACCT	8006	False	NA	10	True	AATAAA	-12	NA	79505243	79511960	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr10_+_79505618_79511233
ENSMUST00000239402.2	chr12	+	2125	13	FSM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	0	0	0	0	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	5689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTCTGTGATTATCTTC	NA	False	NA	NA	False	AATAAA	-12	NA	17316595	17334771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ENSMUST00000239403.2	chr14	+	2406	7	FSM	ENSMUSG00000040997.15	ENSMUST00000239403.2	2406	7	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	38.1200588783502	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTGTTTAATATTGAT	NA	False	NA	16	True	AATAAA	-23	NA	54496688	54506626	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ENSMUST00000239430.2	chr17	-	1442	9	FSM	ENSMUSG00000023919.10	ENSMUST00000087114.5	1942	9	496	4	496	-4	multi-exon	FALSE	canonical	3	128	junction_2	14.1283181943216	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTGATGTGTGAGTAG	NA	False	NA	-5	True	AATAAA	-23	NA	41245442	41233945	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
ENSMUST00000239432.2	chr6	-	1601	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	0	0	0	0	multi-exon	FALSE	canonical	3	1828	junction_3	39.1652482012647	13524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAACCTCTTTGTCCCAG	NA	False	NA	-23	True	AATACA	-16	NA	124791259	124787554	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
ENSMUST00000239436.2	chr8	+	1897	6	FSM	ENSMUSG00000031532.8	ENSMUST00000239436.2	1897	6	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	37.2633868562695	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGTGTTTCGTGTGTGGT	NA	False	NA	33	True	AATAAA	-40	NA	34621716	34637999	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872_34635012_34635610_34635766_34637249
ENSMUST00000239458.2	chrX	-	1625	8	FSM	ENSMUSG00000019088.15	ENSMUST00000239458.2	1625	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	3.01018678652935	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTATGCTTAATTCAAT	NA	False	NA	NA	False	AATAAA	-17	NA	73325342	73316822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_-_73317298_73317383_73317633_73317711_73317825_73317973_73318075_73320084_73320163_73320251_73320341_73320644_73320949_73325126
ENSMUST00000239472.2	chr9	+	988	1	FSM	ENSMUSG00000118653.2	ENSMUST00000239472.2	988	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1822	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAACATATGGT	NA	False	NA	NA	False	AATAAA	-33	NA	56344740	56345728	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr9_+_56344700_56345700
ENSMUST00000239473.2	chr5	+	1813	7	FSM	ENSMUSG00000029344.16	ENSMUST00000239473.2	1813	7	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	59.7847992571876	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGTGAGTAGCTTTCT	NA	False	NA	21	True	AATAAA	-31	NA	112424572	112463221	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr5_+_112424638_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ENSMUST00000239499.2	chr11	-	1771	14	FSM	ENSMUSG00000014195.17	ENSMUST00000239499.2	1771	14	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_11	720.895014063612	1663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5919	False	NA	-21	True	AATAAA	-15	NA	100510457	100473643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490032_100490136_100492553_100492643_100510353
ENSMUST00000239523.1	chrX	+	868	6	FSM	ENSMUSG00000095180.11	ENSMUST00000239523.1	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1588.16578479704	8008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTGATTCGAGTAATAT	9192	False	NA	20	True	ATTAAA	-17	NA	36892322	36897311	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36892366_36892583_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
ENSMUST00000239524.1	chrX	+	766	2	FSM	ENSMUSG00000095180.11	ENSMUST00000239524.1	766	2	0	0	0	0	multi-exon	FALSE	canonical	3	3777	junction_1	0	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAGTGATTCGAGTAA	NA	False	NA	17	True	ATTAAA	-14	NA	36894047	36897308	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chrX_+_36894547_36897041
ENSMUST00000239600.1	chr11	+	215	1	FSM	ENSMUSG00000119761.1	ENSMUST00000239600.1	215	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2037	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGGTTTTATTTTACATGT	NA	False	NA	NA	False	NA	NA	NA	87362193	87362408	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_87362200_87362400
ENSMUST00000240025.1	chr8	-	119	1	FSM	ENSMUSG00000119399.1	ENSMUST00000240025.1	119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGACTCCCCTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	124291143	124291024	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_124291000_124291100
ENSMUST00000240377.1	chr17	+	1849	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16723	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGAGACTGTGGAGGAGC	NA	False	NA	-20	True	NA	NA	NA	40157243	40159092	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr17_+_40157200_40159100
ENSMUST00000240469.1	chr8	-	119	1	FSM	ENSMUSG00000118945.1	ENSMUST00000240469.1	119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1339	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGACTCCCCTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	124326718	124326599	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr8_-_124326600_124326700
ENSMUST00000240535.1	chr11	+	191	1	FSM	ENSMUSG00000119776.1	ENSMUST00000240535.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	714	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGAGTAAAGTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	101518191	101518382	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_101518200_101518400
ENSMUST00020181915.1	chr3	+	127	1	FSM	ENSMUSG00002076937.1	ENSMUST00020181915.1	127	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCACACTTTGCTAGTT	7137	False	NA	NA	False	NA	NA	NA	88601237	88601364	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr3_+_88601200_88601400
ENSMUST00020182044.1	chr11	+	193	1	FSM	ENSMUSG00002076896.1	ENSMUST00020182044.1	193	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTGAAGCTGTGGGG	1335	False	NA	25	True	NA	NA	NA	116968068	116968261	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr11_+_116968100_116968300
ENSMUST00020182737.1	chr19	-	132	1	FSM	ENSMUSG00002075991.1	ENSMUST00020182737.1	132	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTAGAAATATTTGTAT	10015	False	NA	NA	False	AATATA	-30	NA	60762899	60762767	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr19_-_60762800_60762900
ENSMUST00020183322.1	chr16	+	57	1	FSM	ENSMUSG00002076173.1	ENSMUST00020183322.1	57	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1493	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAAGGGGGCCGCCCTCTC	1128	False	NA	NA	False	NA	NA	NA	10961988	10962045	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr16_+_10962000_10962000
ENSMUST00020183435.1	chr12	-	275	1	FSM	ENSMUSG00002076601.1	ENSMUST00020183435.1	275	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGAGCGACTAAGCGTGT	9266	False	NA	NA	False	NA	NA	NA	104997608	104997333	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr12_-_104997300_104997600
ENSMUST00020183439.1	chr1	+	140	1	FSM	ENSMUSG00002074853.1	ENSMUST00020183439.1	140	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGAATTTCCCCTCTAA	NA	False	NA	NA	False	NA	NA	NA	159167852	159167992	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_chr1_+_159167900_159168000
SIRV101	SIRV1	-	1561	6	FSM	SIRV1A	SIRV101	1561	6	0	0	0	0	multi-exon	FALSE	canonical	3	1499	junction_5	1975.53128044078	14625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
SIRV102	SIRV1	-	1300	4	FSM	SIRV1A	SIRV102	1300	4	0	0	0	0	multi-exon	FALSE	canonical	3	4191	junction_1	833.052752764727	5449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAATCGATGCATAC	NA	False	NA	NA	False	NA	NA	NA	10366	1006	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
SIRV103	SIRV1	-	1363	6	FSM	SIRV1A	SIRV103	1363	6	0	0	0	0	multi-exon	FALSE	canonical	3	1304	junction_5	2022.74937646758	9935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10791	1000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10647
SIRV105	SIRV1	-	670	5	FSM	SIRV1A	SIRV105	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	1547	junction_4	2187.81237769604	6940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10640	6449	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10593
SIRV106	SIRV1	-	973	3	FSM	SIRV1A	SIRV106	973	3	0	0	0	0	multi-exon	FALSE	canonical	2	497	junction_2	204	5904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV1_-_1485_7552_7809_10553
SIRV107	SIRV1	-	744	3	FSM	SIRV1A	SIRV107	744	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGGCGCAAGGTACAT	NA	False	NA	NA	False	GATAAA	-18	NA	11643	10647	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV1_-_10792_10882_11243_11403
SIRV108	SIRV1	+	702	3	FSM	SIRV1B	SIRV108	702	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	13	3898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGACATAGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	10582	11606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV1_+_10792_10897_11188_11403
SIRV109	SIRV1	+	464	3	FSM	SIRV1B	SIRV109	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	3494	junction_2	198.5	13230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10711	11643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV1_+_10792_10882_11058_11434
SIRV1A_10583_11643_1	SIRV1	-	739	3	NIC	SIRV1A	novel	744	3	NA	NA	0	65	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	5324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAAGCCCGTCGCCTCTA	NA	False	NA	NA	False	NA	NA	NA	11643	10582	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_SIRV1_-_10792_10897_11188_11403
SIRV1A_1296_10367_1	SIRV1	-	1012	4	FSM	SIRV1A	SIRV102	1300	4	-1	289	-1	-289	multi-exon	FALSE	canonical	3	4191	junction_1	833.052752764727	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAAGAGGAGAACTTGG	NA	False	NA	NA	False	NA	NA	NA	10367	1295	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
SIRV1B_1001_10787_1	SIRV1	+	1562	6	NIC	SIRV1B	novel	702	3	NA	NA	-9582	-819	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	14584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGTGTCATGTCCAACTA	NA	False	NA	NA	False	NA	NA	NA	1000	10787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_SIRV1_+_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
SIRV1B_1296_10787_1	SIRV1	+	1267	6	NIC	SIRV1B	novel	702	3	NA	NA	-9287	-819	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	6792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGTGTCATGTCCAACTA	NA	False	NA	NA	False	NA	NA	NA	1295	10787	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NIC_SIRV1_+_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
SIRV202	SIRV2	-	1971	11	FSM	SIRV2A	SIRV202	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_6	1003.16519576788	8772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCTCTATAGCTGTATC	NA	False	NA	NA	False	NA	NA	NA	5911	1035	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3966_4095_4338_4480_4687_4801_5788
SIRV203	SIRV2	-	686	5	FSM	SIRV2A	SIRV203	686	5	0	0	0	0	multi-exon	FALSE	canonical	3	2087	junction_4	259.923065540556	6592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
SIRV204	SIRV2	-	740	3	FSM	SIRV2A	SIRV204	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	2423	junction_1	198	9294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTATCCTATATCGGA	NA	False	NA	NA	False	NA	NA	NA	4732	3643	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV2_-_3826_3966_4480_4687
SIRV205	SIRV2	+	523	1	FSM	SIRV2B	SIRV205	523	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3977	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCGTCTACCGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	1108	1631	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV2_+_1100_1600
SIRV206	SIRV2	+	424	1	FSM	SIRV2C	SIRV206	424	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5544	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAACACACTTCCATCCAC	NA	False	NA	NA	False	NA	NA	NA	4033	4457	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV2_+_4000_4500
SIRV2B_1001_5895_1	SIRV2	+	2039	11	Genic_Genomic	SIRV2C_SIRV2B	novel	523	1	NA	NA	-108	1438	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8664	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAAATACACCAACTACC	NA	False	NA	NA	False	NA	NA	NA	1000	5895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV2_+_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3375_3665_3826_3966_4095_4338_4480_4687_4801_5788
SIRV2C_3666_5895_1	SIRV2	+	679	5	Genic_Genomic	SIRV2C	novel	424	1	NA	NA	-368	1438	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAAATACACCAACTACC	NA	False	NA	NA	False	NA	NA	NA	3665	5895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV2_+_3826_3966_4095_4338_4480_4687_4801_5758
SIRV2C_3666_5895_2	SIRV2	+	691	5	Genic_Genomic	SIRV2C	novel	424	1	NA	NA	-368	1438	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAAATACACCAACTACC	NA	False	NA	NA	False	NA	NA	NA	3665	5895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV2_+_3831_3966_4095_4338_4480_4687_4801_5751
SIRV2C_3666_5895_3	SIRV2	+	686	5	Genic_Genomic	SIRV2C	novel	424	1	NA	NA	-368	1438	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAAATACACCAACTACC	NA	False	NA	NA	False	NA	NA	NA	3665	5895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV2_+_3826_3966_4095_4338_4486_4693_4801_5751
SIRV2C_3666_5895_4	SIRV2	+	680	5	Genic_Genomic	SIRV2C	novel	424	1	NA	NA	-368	1438	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAAATACACCAACTACC	NA	False	NA	NA	False	NA	NA	NA	3665	5895	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV2_+_3826_3966_4095_4338_4480_4693_4801_5751
SIRV301	SIRV3	+	2467	5	FSM	SIRV3A	SIRV301	2467	5	0	0	0	0	multi-exon	FALSE	canonical	3	1234	junction_3	576.603416569829	7837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1944	8939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV3_+_2006_4568_4780_6057_7989_8127_8208_8755
SIRV302	SIRV3	+	1807	2	FSM	SIRV3A	SIRV302	1807	2	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_1	0	4234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV3_+_2006_6057
SIRV303	SIRV3	+	2018	3	FSM	SIRV3A	SIRV303	2018	3	0	0	0	0	multi-exon	FALSE	canonical	3	1857	junction_1	482	6046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV3_+_2006_4568_4780_6057
SIRV304	SIRV3	+	1083	8	FSM	SIRV3A	SIRV304	1083	8	0	0	0	0	multi-exon	FALSE	canonical	3	1134	junction_6	907.203057620014	8153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1963	8937	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7989_8124_8208_8755
SIRV305	SIRV3	+	436	3	FSM	SIRV3A	SIRV305	436	3	0	0	0	0	multi-exon	FALSE	canonical	3	1609	junction_2	828.5	11852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4003	6718	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV3_+_4081_4568_4780_6570
SIRV306	SIRV3	+	2373	3	FSM	SIRV3A	SIRV306	2373	3	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_2	1218.5	5684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCTAACAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	1944	8292	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV3_+_2006_4003_4081_6057
SIRV307	SIRV3	+	779	5	FSM	SIRV3A	SIRV307	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	1252	junction_4	794.143052289699	7384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1963	8939	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV3_+_2006_4003_4081_4574_4775_6057_6334_8755
SIRV308	SIRV3	-	479	3	FSM	SIRV3B	SIRV308	479	3	0	0	0	0	multi-exon	FALSE	canonical	3	5391	junction_1	17	8689	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATTTGTATGGCGGA	NA	False	NA	NA	False	NA	NA	NA	1982	1000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV3_-_1168_1532_1765_1902
SIRV309	SIRV3	-	796	3	FSM	SIRV3C	SIRV309	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1394	junction_2	16	5016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAAATATCTGTGTC	NA	False	NA	NA	False	CATAAA	-21	NA	9943	8797	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV3_-_8976_9189_9299_9434
SIRV310	SIRV3	-	589	3	FSM	SIRV3C	SIRV310	589	3	0	0	0	0	multi-exon	FALSE	canonical	3	1245	junction_2	66	6953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTGGTTTTGGGTACT	NA	False	NA	NA	False	NA	NA	NA	9914	8759	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV3_-_8967_9189_9325_9667
SIRV311	SIRV3	-	161	1	FSM	SIRV3D	SIRV311	161	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAAGATTTCGACTT	NA	False	NA	NA	False	NA	NA	NA	4762	4601	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV3_-_4600_4800
SIRV3C_1964_8940_1	SIRV3	-	1086	8	Fusion	SIRV3C_SIRV3B	novel	589	3	NA	NA	974	-963	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8079	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTATTTGCTTCTCCACC	NA	False	NA	NA	False	NA	NA	NA	8940	1963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_SIRV3_-_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7989_8124_8208_8755
SIRV3C_1964_8940_2	SIRV3	-	780	5	Fusion	SIRV3C_SIRV3B	novel	589	3	NA	NA	974	-963	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTATTTGCTTCTCCACC	NA	False	NA	NA	False	NA	NA	NA	8940	1963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_SIRV3_-_2006_4003_4081_4574_4775_6057_6334_8755
SIRV3C_1964_8940_3	SIRV3	-	1093	8	Fusion	SIRV3C_SIRV3B	novel	589	3	NA	NA	974	-963	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7048	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTATTTGCTTCTCCACC	NA	False	NA	NA	False	NA	NA	NA	8940	1963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_SIRV3_-_2006_4003_4081_4568_4780_6057_6334_7270_7367_7865_7989_8124_8208_8755
SIRV3D_1964_7822_1	SIRV3	-	2013	3	Fusion	SIRV3D_SIRV3B	novel	479	3	NA	NA	-3060	-963	intron_retention	FALSE	non_canonical	0	0	junction_1	0	6674	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTATTTGCTTCTCCACC	NA	False	NA	NA	False	NA	NA	NA	7822	1963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_SIRV3_-_2006_4568_4775_6057
SIRV3D_1964_8799_1	SIRV3	-	945	8	Fusion	SIRV3C_SIRV3B	novel	589	3	NA	NA	1115	-963	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTATTTGCTTCTCCACC	NA	False	NA	NA	False	NA	NA	NA	8799	1963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_SIRV3_-_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7989_8124_8208_8755
SIRV3D_1964_8799_2	SIRV3	-	639	5	Fusion	SIRV3C_SIRV3B	novel	589	3	NA	NA	1115	-963	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2546	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTATTTGCTTCTCCACC	NA	False	NA	NA	False	NA	NA	NA	8799	1963	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Fusion_SIRV3_-_2006_4003_4081_4574_4775_6057_6334_8755
SIRV3D_4004_6718_1	SIRV3	-	429	3	Genic_Genomic	SIRV3D	novel	161	1	NA	NA	-1956	598	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGAACAATATGTTTT	NA	False	NA	NA	False	NA	NA	NA	6718	4003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV3_-_4081_4568_4780_6577
SIRV3D_4004_6718_10	SIRV3	-	431	3	Genic_Genomic	SIRV3D	novel	161	1	NA	NA	-1956	598	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGAACAATATGTTTT	NA	False	NA	NA	False	NA	NA	NA	6718	4003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV3_-_4081_4568_4775_6570
SIRV3D_4004_6718_11	SIRV3	-	431	3	Genic_Genomic	SIRV3D	novel	161	1	NA	NA	-1956	598	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGAACAATATGTTTT	NA	False	NA	NA	False	NA	NA	NA	6718	4003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV3_-_4076_4568_4780_6570
SIRV3D_4004_6718_2	SIRV3	-	424	3	Genic_Genomic	SIRV3D	novel	161	1	NA	NA	-1956	598	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGAACAATATGTTTT	NA	False	NA	NA	False	NA	NA	NA	6718	4003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV3_-_4081_4568_4775_6577
SIRV3D_4004_6718_3	SIRV3	-	430	3	Genic_Genomic	SIRV3D	novel	161	1	NA	NA	-1956	598	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGAACAATATGTTTT	NA	False	NA	NA	False	NA	NA	NA	6718	4003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV3_-_4081_4574_4780_6570
SIRV3D_4004_6718_4	SIRV3	-	442	3	Genic_Genomic	SIRV3D	novel	161	1	NA	NA	-1956	598	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGAACAATATGTTTT	NA	False	NA	NA	False	NA	NA	NA	6718	4003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV3_-_4087_4568_4780_6570
SIRV3D_4004_6718_5	SIRV3	-	440	3	Genic_Genomic	SIRV3D	novel	161	1	NA	NA	-1956	598	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGAACAATATGTTTT	NA	False	NA	NA	False	NA	NA	NA	6718	4003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV3_-_4081_4568_4775_6561
SIRV3D_4004_6718_7	SIRV3	-	431	3	Genic_Genomic	SIRV3D	novel	161	1	NA	NA	-1956	598	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGAACAATATGTTTT	NA	False	NA	NA	False	NA	NA	NA	6718	4003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV3_-_4069_4561_4780_6570
SIRV3D_4004_6718_8	SIRV3	-	424	3	Genic_Genomic	SIRV3D	novel	161	1	NA	NA	-1956	598	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGAACAATATGTTTT	NA	False	NA	NA	False	NA	NA	NA	6718	4003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV3_-_4069_4568_4780_6570
SIRV3D_4004_6718_9	SIRV3	-	436	3	Genic_Genomic	SIRV3D	novel	161	1	NA	NA	-1956	598	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGAACAATATGTTTT	NA	False	NA	NA	False	NA	NA	NA	6718	4003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV3_-_4087_4574_4780_6570
SIRV403	SIRV4	-	670	4	FSM	SIRV4A	SIRV403	670	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3065.46367708958	22717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	15122	8322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV4_-_8373_8629_8991_13672_13829_15019
SIRV404	SIRV4	-	592	4	FSM	SIRV4A	SIRV404	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_3	2787.93595494747	6410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	14623	8322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV4_-_8373_8629_8991_13672_13823_14592
SIRV405	SIRV4	-	626	2	FSM	SIRV4A	SIRV405	626	2	0	0	0	0	multi-exon	FALSE	canonical	3	7498	junction_1	0	5936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCTCTTTTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	13937	8629	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV4_-_8991_13672
SIRV406	SIRV4	-	617	2	FSM	SIRV4B	SIRV406	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	2584	junction_1	0	7135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTAAAAATAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	5158	3637	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV4_-_4104_5007
SIRV408	SIRV4	-	570	5	FSM	SIRV4A	SIRV408	570	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2658.88059152719	11007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGATATTTAGAGCGT	NA	False	NA	NA	False	NA	NA	NA	15122	8323	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV4_-_8373_8629_8748_8846_8991_13672_13829_15019
SIRV409	SIRV4	+	1567	3	FSM	SIRV4C	SIRV409	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	1019	junction_2	11.5	2400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	1000	3403	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV4_+_1347_1678_1886_2389
SIRV410	SIRV4	+	950	2	FSM	SIRV4C	SIRV410	950	2	0	0	0	0	multi-exon	FALSE	canonical	3	1621	junction_1	0	5275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTATATGTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	1455	2771	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV4_+_1886_2251
SIRV4A_8323_15123_1	SIRV4	-	672	4	NNC	SIRV4A	novel	592	4	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_3	3065.46367708958	19574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	15123	8322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_SIRV4_-_8373_8629_8991_13672_13823_15012
SIRV4A_8323_15123_2	SIRV4	-	671	4	NNC	SIRV4A	novel	592	4	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_3	3065.46367708958	21281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	15123	8322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_SIRV4_-_8373_8629_8991_13672_13823_15013
SIRV4A_8323_15123_3	SIRV4	-	666	4	NNC	SIRV4A	novel	670	4	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_3	3065.46367708958	16301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	15123	8322	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_SIRV4_-_8373_8629_8991_13672_13829_15024
SIRV501	SIRV5	+	1890	17	FSM	SIRV5A	SIRV501	1890	17	0	0	0	0	multi-exon	FALSE	canonical	3	1808	junction_14	3064.59256060247	3465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1056	10991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV5_+_1150_1987_2034_2119_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
SIRV502	SIRV5	+	1984	18	FSM	SIRV5A	SIRV502	1984	18	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_4	3430.92271124242	3627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	1019	10989	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
SIRV503	SIRV5	+	526	3	FSM	SIRV5A	SIRV503	526	3	0	0	0	0	multi-exon	FALSE	canonical	3	1532	junction_2	5146.5	7326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCGCTTGCCCAATTG	NA	False	NA	NA	False	NA	NA	NA	8201	11142	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV5_+_8586_10858_10992_11133
SIRV504	SIRV5	+	2473	1	FSM	SIRV5A	SIRV504	2473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3306	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATGTAAAACATTTGTT	NA	False	NA	NA	False	NA	NA	NA	11133	13606	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV5_+_11100_13600
SIRV505	SIRV5	+	2029	16	FSM	SIRV5A	SIRV505	2029	16	0	0	0	0	multi-exon	FALSE	canonical	3	5578	junction_10	1970.92572045614	10368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1000	10991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
SIRV506	SIRV5	+	552	2	FSM	SIRV5A	SIRV506	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	11478	junction_1	0	33216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1008	2398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV5_+_1150_1987
SIRV507	SIRV5	+	533	6	FSM	SIRV5A	SIRV507	533	6	0	0	0	0	multi-exon	FALSE	canonical	3	3871	junction_1	2708.37786137754	14363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483
SIRV508	SIRV5	+	2085	17	FSM	SIRV5A	SIRV508	2085	17	0	0	0	0	multi-exon	FALSE	canonical	3	2297	junction_10	2773.74385702339	10926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1008	10991	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
SIRV509	SIRV5	+	885	4	FSM	SIRV5A	SIRV509	885	4	0	0	0	0	multi-exon	FALSE	canonical	3	1024	junction_3	4608.45413946538	5357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	8315	11866	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV5_+_8382_8454_8586_10858_10992_11311
SIRV510	SIRV5	+	2474	18	FSM	SIRV5A	SIRV510	2474	18	0	0	0	0	multi-exon	FALSE	canonical	3	1532	junction_17	2924.81329602575	10993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1028	11867	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
SIRV512	SIRV5	-	229	1	FSM	SIRV5B	SIRV512	229	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5309	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATGTTAGACCTTTA	NA	False	NA	NA	False	AATATA	-23	NA	2406	2177	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV5_-_2200_2400
SIRV5A_1009_2398_1	SIRV5	+	547	2	NNC	SIRV5A	novel	552	2	NA	NA	0	0	intron_retention	FALSE	canonical	2	386	junction_1	0	33122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1008	2398	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	NNC_SIRV5_+_1150_1992
SIRV5B_1009_10991_1	SIRV5	-	2021	16	Genic_Genomic	SIRV5B	novel	229	1	NA	NA	-8585	1169	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGTCCTGGACTGCGATC	NA	False	NA	NA	False	NA	NA	NA	10991	1008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV5_-_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
SIRV5B_1009_10991_2	SIRV5	-	1997	18	Genic_Genomic	SIRV5B	novel	229	1	NA	NA	-8585	1169	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGTCCTGGACTGCGATC	NA	False	NA	NA	False	NA	NA	NA	10991	1008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV5_-_1150_1987_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
SIRV5B_1009_3598_1	SIRV5	-	550	5	Genic_Genomic	SIRV5B	novel	229	1	NA	NA	-1192	1169	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGTCCTGGACTGCGATC	NA	False	NA	NA	False	NA	NA	NA	3598	1008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV5_-_1150_1925_2069_2270_2316_3298_3405_3483
SIRV5B_1009_3598_2	SIRV5	-	546	5	Genic_Genomic	SIRV5B	novel	229	1	NA	NA	-1192	1169	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGTCCTGGACTGCGATC	NA	False	NA	NA	False	NA	NA	NA	3598	1008	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV5_-_1150_1925_2034_2119_2196_3298_3405_3483
SIRV601	SIRV6	+	1435	9	FSM	SIRV6A	SIRV601	1435	9	0	0	0	0	multi-exon	TRUE	canonical	3	2056	junction_3	7596.8547757855	24113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACCGGGAGTATACTT	NA	False	NA	NA	False	NA	NA	NA	1000	11826	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
SIRV602	SIRV6	-	574	8	Genic_Genomic	SIRV6B	novel	276	1	NA	NA	-9459	420	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGCGGCGCAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	11279	1124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV6_-_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
SIRV603	SIRV6	+	1969	1	FSM	SIRV6A	SIRV603	1969	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2569	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAGATTTCGACCGAA	NA	False	NA	NA	False	ATTAAA	-26	NA	8999	10968	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV6_+_9000_11000
SIRV604	SIRV6	+	1537	10	FSM	SIRV6A	SIRV604	1537	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	9140.21704229429	15367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATACTTAGTTCAATCTT	NA	False	NA	NA	False	NA	NA	NA	1087	11837	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11034_11109_11205
SIRV605	SIRV6	+	1088	9	FSM	SIRV6A	SIRV605	1088	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8239.38325968637	9032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
SIRV606	SIRV6	+	545	4	FSM	SIRV6A	SIRV606	545	4	0	0	0	0	multi-exon	FALSE	canonical	3	12902	junction_1	3352.72986617705	16376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2285	10788	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724
SIRV607	SIRV6	+	574	4	FSM	SIRV6A	SIRV607	574	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10529.1711924538	11454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1130	2540	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV6_+_1187_1468_1736_1845_2027_2470
SIRV608	SIRV6	+	377	4	FSM	SIRV6A	SIRV608	377	4	0	0	0	0	multi-exon	FALSE	canonical	3	18415	junction_1	2118.18355095954	8521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3023	11270	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
SIRV609	SIRV6	+	485	4	FSM	SIRV6A	SIRV609	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	15063	junction_3	5493.41668626083	21359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1137	2120	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845
SIRV610	SIRV6	+	1163	5	FSM	SIRV6A	SIRV610	1163	5	0	0	0	0	multi-exon	FALSE	canonical	3	12902	junction_1	2966.72052736688	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2472	11690	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724_11109_11205
SIRV611	SIRV6	+	454	3	FSM	SIRV6A	SIRV611	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	2656	junction_1	12443	7335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1303	1950	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV6_+_1382_1468_1535_1640
SIRV612	SIRV6	+	1528	10	FSM	SIRV6A	SIRV612	1528	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7772.9807349673	16861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
SIRV613	SIRV6	+	1311	6	FSM	SIRV6A	SIRV613	1311	6	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_2	9686.74001715748	4270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11109_11205
SIRV614	SIRV6	+	459	5	FSM	SIRV6A	SIRV614	459	5	0	0	0	0	multi-exon	FALSE	canonical	3	2976	junction_3	7392.30118095847	9931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAGACTGTATCGGAG	NA	False	NA	NA	False	AAAAAG	-17	NA	2516	10815	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV6_+_2621_2740_2829_3106_3165_7805_7924_10724
SIRV615	SIRV6	+	783	3	FSM	SIRV6A	SIRV615	783	3	0	0	0	0	multi-exon	FALSE	canonical	3	18822	junction_2	2138	21769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGCAATCAACTCA	NA	False	NA	NA	False	NA	NA	NA	10237	11330	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV6_+_10819_11031_11109_11205
SIRV616	SIRV6	-	531	4	Genic_Genomic	SIRV6C	novel	189	1	NA	NA	-8241	73	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACGACCTACTAAACTTC	NA	False	NA	NA	False	NA	NA	NA	10788	2285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV6_-_2621_2740_2815_3106_3165_10724
SIRV617	SIRV6	-	276	1	FSM	SIRV6B	SIRV617	276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTCTACTTGGGCACCT	NA	False	NA	NA	False	NA	NA	NA	1820	1544	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV6_-_1500_1800
SIRV6B_1125_11279_1	SIRV6	-	566	8	Genic_Genomic	SIRV6B	novel	276	1	NA	NA	-9459	420	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGCGGCGCAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	11279	1124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV6_-_1187_1468_1527_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
SIRV6B_1125_11331_1	SIRV6	-	1098	9	Genic_Genomic	SIRV6B_SIRV6C	novel	276	1	NA	NA	-8784	420	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9022	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGCGGCGCAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	11331	1124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV6_-_1187_1468_1535_1640_1736_1845_2035_2474_2621_2740_2829_3106_3165_10724_10819_11031
SIRV6B_1125_11827_1	SIRV6	-	1493	10	Genic_Genomic	SIRV6B_SIRV6C	novel	276	1	NA	NA	-9280	420	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGCGGCGCAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	11827	1124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV6_-_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
SIRV6B_1125_2120_1	SIRV6	-	490	4	Genic_Genomic	SIRV6B	novel	276	1	NA	NA	-300	420	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGCGGCGCAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	2120	1124	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV6_-_1187_1468_1527_1640_1736_1845
SIRV6C_2286_10788_1	SIRV6	-	551	4	Genic_Genomic	SIRV6C	novel	189	1	NA	NA	-8241	73	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACGACCTACTAAACTTC	NA	False	NA	NA	False	NA	NA	NA	10788	2285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV6_-_2621_2740_2829_3106_3171_10724
SIRV6C_2286_10788_3	SIRV6	-	535	4	Genic_Genomic	SIRV6C	novel	189	1	NA	NA	-8241	73	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACGACCTACTAAACTTC	NA	False	NA	NA	False	NA	NA	NA	10788	2285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV6_-_2621_2750_2829_3106_3165_10724
SIRV6C_2286_10788_4	SIRV6	-	521	4	Genic_Genomic	SIRV6C	novel	189	1	NA	NA	-8241	73	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8795	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACGACCTACTAAACTTC	NA	False	NA	NA	False	NA	NA	NA	10788	2285	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV6_-_2621_2750_2815_3106_3165_10724
SIRV6C_2517_10788_4	SIRV6	-	427	5	Genic_Genomic	SIRV6C	novel	189	1	NA	NA	-8241	-158	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6318	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTGGCACTTTAGCAAC	NA	False	NA	NA	False	NA	NA	NA	10788	2516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV6_-_2621_2745_2829_3106_3165_7805_7924_10724
SIRV6C_2517_11690_1	SIRV6	-	1119	5	Genic_Genomic	SIRV6C	novel	189	1	NA	NA	-9143	-158	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4011	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTGGCACTTTAGCAAC	NA	False	NA	NA	False	NA	NA	NA	11690	2516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV6_-_2621_2740_2829_3106_3165_10724_11109_11205
SIRV6C_2517_11690_2	SIRV6	-	1115	5	Genic_Genomic	SIRV6C	novel	189	1	NA	NA	-9143	-158	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3856	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTGGCACTTTAGCAAC	NA	False	NA	NA	False	NA	NA	NA	11690	2516	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	Genic_Genomic_SIRV6_-_2627_2750_2829_3106_3165_10724_11109_11205
SIRV701	SIRV7	-	2462	5	FSM	SIRV7A	SIRV701	2462	5	0	0	0	0	multi-exon	FALSE	canonical	3	1923	junction_2	1231.81783860277	6358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGTGTTAATATGAATC	NA	False	NA	NA	False	TATAAA	-19	NA	147923	1003	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
SIRV702	SIRV7	-	2247	6	FSM	SIRV7A	SIRV702	2247	6	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	1351.00954844886	3872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	114916	1000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43078_114680
SIRV703	SIRV7	-	2498	5	FSM	SIRV7A	SIRV703	2498	5	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_2	1651.92015167199	6148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	147918	1000	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147608
SIRV704	SIRV7	-	428	3	FSM	SIRV7A	SIRV704	428	3	0	0	0	0	multi-exon	FALSE	canonical	3	4944	junction_1	1233	12267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTCGTATTTGCTGCT	NA	False	NA	NA	False	ATTAAA	-33	NA	114738	55849	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV7_-_56098_78841_78964_114680
SIRV706	SIRV7	-	949	5	FSM	SIRV7A	SIRV706	949	5	0	0	0	0	multi-exon	FALSE	canonical	3	3147	junction_1	1522.61994601411	11468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV7_-_56098_70883_70988_78841_78964_114680_114989_147608
SIRV708	SIRV7	-	889	6	FSM	SIRV7A	SIRV708	889	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1573.00102987887	7142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCCTAAGAGATCGAC	NA	False	NA	NA	False	NA	NA	NA	147957	56037	ES_cdna_ont	iso_detect_ref_ritchie_cdna_ont	FSM_SIRV7_-_56098_70883_70988_78841_78909_78928_78964_114686_114961_147608
